-- dump date 20140619_005142 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 526224000001 SEQ_END SEQ_END NC_014150.1 3241804 3241804 DR NC_014150.1; contig end 3241804..3241804 Brachyspira murdochii DSM 12563 YP_003632311.1 CDS Bmur_0001 NC_014150.1 132 1511 D TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bhy:BHWA1_00217 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosome replication initiator DnaA 132..1511 Brachyspira murdochii DSM 12563 9143862 YP_003632312.1 CDS Bmur_0002 NC_014150.1 2051 2671 D PFAM: GrpE protein; KEGG: bhy:BHWA1_00218 protein GrpE (HSP-70 cofactor); heat shock protein GrpE 2051..2671 Brachyspira murdochii DSM 12563 9140969 YP_003632313.1 CDS Bmur_0003 NC_014150.1 2693 2902 D KEGG: hypothetical protein; hypothetical protein 2693..2902 Brachyspira murdochii DSM 12563 9140970 YP_003632314.1 CDS Bmur_0004 NC_014150.1 2992 4908 D KEGG: bhy:BHWA1_00219 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 2992..4908 Brachyspira murdochii DSM 12563 9140971 YP_003632315.1 CDS Bmur_0005 NC_014150.1 5123 5455 D PFAM: ankyrin; KEGG: ankyrin repeat protein; ankyrin 5123..5455 Brachyspira murdochii DSM 12563 9140972 YP_003632316.1 CDS Bmur_0006 NC_014150.1 5465 6406 D KEGG: bhy:BHWA1_00853 hypothetical protein; hypothetical protein 5465..6406 Brachyspira murdochii DSM 12563 9140973 YP_003632317.1 CDS Bmur_0007 NC_014150.1 6556 7248 D PFAM: protein of unknown function DUF1275; KEGG: bhy:BHWA1_00222 hypothetical protein; hypothetical protein 6556..7248 Brachyspira murdochii DSM 12563 9140974 YP_003632318.1 CDS Bmur_0008 NC_014150.1 7274 7564 D KEGG: bhy:BHWA1_00223 chaperone protein DnaJ; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; molecular chaperone DnaJ 7274..7564 Brachyspira murdochii DSM 12563 9140975 YP_003632319.1 CDS Bmur_0009 NC_014150.1 7604 8734 D TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: bhy:BHWA1_00224 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein; molecular chaperone DnaJ 7604..8734 Brachyspira murdochii DSM 12563 9140976 YP_003632320.1 CDS Bmur_0010 NC_014150.1 8859 9899 D PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_00598 ankyrin repeat-containing protein; molecular chaperone GroES 8859..9899 Brachyspira murdochii DSM 12563 9140977 YP_003632321.1 CDS Bmur_0011 NC_014150.1 10288 12345 R TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; KEGG: bhy:BHWA1_00365 excinuclease ABC, B subunit; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B complement(10288..12345) Brachyspira murdochii DSM 12563 9140978 YP_003632322.1 CDS Bmur_0012 NC_014150.1 12373 13278 R KEGG: bhy:BHWA1_00366 hypothetical protein; hypothetical protein complement(12373..13278) Brachyspira murdochii DSM 12563 9140979 YP_003632323.1 CDS Bmur_0013 NC_014150.1 13510 14364 R PFAM: peptidase M23; KEGG: bhy:BHWA1_00367 peptidase; peptidase M23 complement(13510..14364) Brachyspira murdochii DSM 12563 9140980 YP_003632324.1 CDS Bmur_0014 NC_014150.1 14361 15536 R KEGG: bhy:BHWA1_00368 hypothetical protein; hypothetical protein complement(14361..15536) Brachyspira murdochii DSM 12563 9140981 YP_003632325.1 CDS Bmur_0015 NC_014150.1 15593 16780 R PFAM: peptidase M23; KEGG: bhy:BHWA1_00369 peptidase; peptidase M23 complement(15593..16780) Brachyspira murdochii DSM 12563 9140982 YP_003632326.1 CDS Bmur_0016 NC_014150.1 16832 17521 R PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; KEGG: bhy:BHWA1_00370 TPR domain-containing protein; hypothetical protein complement(16832..17521) Brachyspira murdochii DSM 12563 9140983 YP_003632327.1 CDS Bmur_0017 NC_014150.1 17875 19782 D KEGG: bhy:BHWA1_00744 penicillin-binding protein 3; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; peptidoglycan glycosyltransferase 17875..19782 Brachyspira murdochii DSM 12563 9140985 YP_003632328.1 CDS Bmur_0018 NC_014150.1 19804 20706 D PFAM: PfkB domain protein; KEGG: bhy:BHWA1_00743 carbohydrate kinase, PfkB family; PfkB domain-containing protein 19804..20706 Brachyspira murdochii DSM 12563 9140986 YP_003632329.1 CDS Bmur_0019 NC_014150.1 20711 21265 R KEGG: bhy:BHWA1_00742 hypothetical protein; hypothetical protein complement(20711..21265) Brachyspira murdochii DSM 12563 9140987 YP_003632330.1 CDS Bmur_0020 NC_014150.1 21293 22465 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_00741 hypothetical protein; hypothetical protein complement(21293..22465) Brachyspira murdochii DSM 12563 9140988 YP_003632331.1 CDS Bmur_0021 NC_014150.1 22492 23142 R PFAM: protein of unknown function DUF151; UvrB/UvrC protein; KEGG: bhy:BHWA1_00740 hypothetical protein; hypothetical protein complement(22492..23142) Brachyspira murdochii DSM 12563 9140989 YP_003632332.1 CDS Bmur_0022 NC_014150.1 23339 25096 D KEGG: bhy:BHWA1_00739 hypothetical protein; hypothetical protein 23339..25096 Brachyspira murdochii DSM 12563 9140990 YP_003632333.1 CDS Bmur_0023 NC_014150.1 25083 27134 D KEGG: bhy:BHWA1_00738 hypothetical protein; hypothetical protein 25083..27134 Brachyspira murdochii DSM 12563 9140991 YP_003632334.1 CDS Bmur_0024 NC_014150.1 27314 29854 R SMART: helicase c2; DEAD-like helicase; KEGG: bhy:BHWA1_00600 helicase; helicase c2 complement(27314..29854) Brachyspira murdochii DSM 12563 9140992 YP_003632335.1 CDS Bmur_0025 NC_014150.1 30283 31614 D KEGG: ppd:Ppro_0172 ATPase central domain- containing protein; PFAM: ATPase AAA; SMART: AAA ATPase; ATPase AAA 30283..31614 Brachyspira murdochii DSM 12563 9140993 YP_003632336.1 CDS Bmur_0026 NC_014150.1 31657 32154 D KEGG: viral A-type inclusion protein; hypothetical protein 31657..32154 Brachyspira murdochii DSM 12563 9140994 YP_003632337.1 CDS Bmur_0027 NC_014150.1 32171 32500 D KEGG: cbh:CLC_1106 hypothetical protein; hypothetical protein 32171..32500 Brachyspira murdochii DSM 12563 9140995 YP_003632338.1 CDS Bmur_0028 NC_014150.1 32513 32899 D KEGG: cysteinyl-tRNA synthetase; hypothetical protein 32513..32899 Brachyspira murdochii DSM 12563 9140996 YP_003632339.1 CDS Bmur_0029 NC_014150.1 32902 33447 D KEGG: cbt:CLH_2831 hypothetical protein; hypothetical protein 32902..33447 Brachyspira murdochii DSM 12563 9140997 YP_003632340.1 CDS Bmur_0030 NC_014150.1 33457 33870 D KEGG: kinase domain containing protein; hypothetical protein 33457..33870 Brachyspira murdochii DSM 12563 9140998 YP_003632341.1 CDS Bmur_0031 NC_014150.1 33890 34120 D KEGG: similar to cytochrome C-type biogenesis protein CCMF; hypothetical protein 33890..34120 Brachyspira murdochii DSM 12563 9140999 YP_003632342.1 CDS Bmur_0032 NC_014150.1 34156 35343 R KEGG: bhy:BHWA1_00588 enzyme of poly-gamma- glutamate biosynthesis (capsule formation)-like protein; PFAM: capsule synthesis protein, CapA; SMART: capsule synthesis protein, CapA; capsule synthesis protein, CapA complement(34156..35343) Brachyspira murdochii DSM 12563 9141000 YP_003632343.1 CDS Bmur_0033 NC_014150.1 35394 36797 R KEGG: bhy:BHWA1_00587 hemolysin protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; hypothetical protein complement(35394..36797) Brachyspira murdochii DSM 12563 9141001 YP_003632344.1 CDS Bmur_0034 NC_014150.1 36816 37502 R PFAM: N-acetylmuramoyl-L-alanine amidase 2; KEGG: bhy:BHWA1_00586 hypothetical protein; N-acetylmuramoyl-L-alanine amidase complement(36816..37502) Brachyspira murdochii DSM 12563 9141002 YP_003632345.1 CDS Bmur_0035 NC_014150.1 37514 37990 R PFAM: CheC domain protein; KEGG: bhy:BHWA1_00585 chemotaxis protein CheX; chemotaxis protein CheC complement(37514..37990) Brachyspira murdochii DSM 12563 9141003 YP_003632346.1 CDS Bmur_0036 NC_014150.1 38394 42116 D TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; KEGG: bhy:BHWA1_00584 DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 38394..42116 Brachyspira murdochii DSM 12563 9141004 YP_003632347.1 CDS Bmur_0037 NC_014150.1 42485 43477 R TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: bhy:BHWA1_00449 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase complement(42485..43477) Brachyspira murdochii DSM 12563 9141005 YP_003632348.1 CDS Bmur_0038 NC_014150.1 43554 44540 R PFAM: PSP1 domain protein; KEGG: bhy:BHWA1_00448 PSP1; PSP1 domain-containing protein complement(43554..44540) Brachyspira murdochii DSM 12563 9141006 YP_003632349.1 CDS Bmur_0039 NC_014150.1 44709 45326 D KEGG: bhy:BHWA1_00447 hypothetical protein; hypothetical protein 44709..45326 Brachyspira murdochii DSM 12563 9141007 YP_003632350.1 CDS Bmur_0040 NC_014150.1 45323 48019 R KEGG: bhy:BHWA1_00756 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein complement(45323..48019) Brachyspira murdochii DSM 12563 9141008 YP_003632351.1 CDS Bmur_0041 NC_014150.1 48182 49216 R KEGG: bhy:BHWA1_00044 hypothetical protein; hypothetical protein complement(48182..49216) Brachyspira murdochii DSM 12563 9141009 YP_003632352.1 CDS Bmur_0042 NC_014150.1 49737 50429 D KEGG: bhy:BHWA1_00446 hemolysin III TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; hemolysin III family channel protein 49737..50429 Brachyspira murdochii DSM 12563 9141010 YP_003632353.1 CDS Bmur_0043 NC_014150.1 50511 51551 D KEGG: bhy:BHWA1_00445 rhodanese-like domain protein; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; tRNA 2-selenouridine synthase 50511..51551 Brachyspira murdochii DSM 12563 9141011 YP_003632354.1 CDS Bmur_0044 NC_014150.1 51576 53417 D TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: bhy:BHWA1_00124 excinuclease ABC, C subunit; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 51576..53417 Brachyspira murdochii DSM 12563 9141012 YP_003632355.1 CDS Bmur_0045 NC_014150.1 53433 54557 R PFAM: Radical SAM domain protein; KEGG: bhy:BHWA1_00125 arylsulfatase regulator; radical SAM protein complement(53433..54557) Brachyspira murdochii DSM 12563 9141013 YP_003632356.1 CDS Bmur_0046 NC_014150.1 54735 55670 D KEGG: bhy:BHWA1_00127 hypothetical protein; hypothetical protein 54735..55670 Brachyspira murdochii DSM 12563 9141014 YP_003632357.1 CDS Bmur_0047 NC_014150.1 55955 57307 D PFAM: nucleoside recognition domain protein; KEGG: bhy:BHWA1_00129 hypothetical protein; nucleoside recognition domain-containing protein 55955..57307 Brachyspira murdochii DSM 12563 9141015 YP_003632358.1 CDS Bmur_0048 NC_014150.1 57332 58126 D KEGG: bhy:BHWA1_00130 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family 57332..58126 Brachyspira murdochii DSM 12563 9141016 YP_003632359.1 CDS Bmur_0049 NC_014150.1 58200 58994 D KEGG: bhy:BHWA1_00131 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 58200..58994 Brachyspira murdochii DSM 12563 9141017 YP_003632360.1 CDS Bmur_0050 NC_014150.1 59123 60061 R PFAM: bile acid:sodium symporter; KEGG: bhy:BHWA1_00132 transporter; bile acid:sodium symporter complement(59123..60061) Brachyspira murdochii DSM 12563 9141018 YP_003632361.1 CDS Bmur_0051 NC_014150.1 60091 61176 R PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_00133 glycerol dehydrogenase; iron-containing alcohol dehydrogenase complement(60091..61176) Brachyspira murdochii DSM 12563 9141019 YP_003632362.1 CDS Bmur_0052 NC_014150.1 61499 63181 R TIGRFAM: dihydroxy-acid dehydratase; KEGG: bhy:BHWA1_00134 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(61499..63181) Brachyspira murdochii DSM 12563 9141020 YP_003632363.1 CDS Bmur_0053 NC_014150.1 63483 65420 D KEGG: bhy:BHWA1_00135 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 63483..65420 Brachyspira murdochii DSM 12563 9141021 YP_003632364.1 CDS Bmur_0054 NC_014150.1 65487 67364 R PFAM: AMP-dependent synthetase and ligase; KEGG: bhy:BHWA1_00552 long-chain acyl-CoA synthetases (AMP-forming); AMP-dependent synthetase/ligase complement(65487..67364) Brachyspira murdochii DSM 12563 9141022 YP_003632365.1 CDS Bmur_0055 NC_014150.1 67439 68569 R PFAM: glycosyl transferase group 1; KEGG: bhy:BHWA1_00551 mannosyltransferase; group 1 glycosyl transferase complement(67439..68569) Brachyspira murdochii DSM 12563 9141023 YP_003632366.1 CDS Bmur_0056 NC_014150.1 68688 69641 D KEGG: cpy:Cphy_3193 esterase; esterase 68688..69641 Brachyspira murdochii DSM 12563 9141024 YP_003632367.1 CDS Bmur_0057 NC_014150.1 70115 71041 D KEGG: efe:EFER_2124 hypothetical protein; hypothetical protein 70115..71041 Brachyspira murdochii DSM 12563 9141025 YP_003632368.1 CDS Bmur_0058 NC_014150.1 71046 71657 R KEGG: bhy:BHWA1_00374 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(71046..71657) Brachyspira murdochii DSM 12563 9141026 YP_003632369.1 CDS Bmur_0059 NC_014150.1 72127 73713 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bhy:BHWA1_00375 pyrrolo-quinoline quinone; ATPase AAA 72127..73713 Brachyspira murdochii DSM 12563 9141027 YP_003632370.1 CDS Bmur_0060 NC_014150.1 73700 75136 D SMART: von Willebrand factor type A; KEGG: bhy:BHWA1_00376 von Willebrand factor type A (vWA) domain containing protein; von Willebrand factor A 73700..75136 Brachyspira murdochii DSM 12563 9141028 YP_003632371.1 CDS Bmur_0061 NC_014150.1 75141 75968 R TIGRFAM: glutamate racemase; KEGG: bhy:BHWA1_00378 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase complement(75141..75968) Brachyspira murdochii DSM 12563 9141029 YP_003632372.1 CDS Bmur_0062 NC_014150.1 76145 76393 D KEGG: bhy:BHWA1_00379 hypothetical protein; TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; sodium pump decarboxylase, gamma subunit 76145..76393 Brachyspira murdochii DSM 12563 9141030 YP_003632373.1 CDS Bmur_0063 NC_014150.1 76421 78232 D KEGG: bhy:BHWA1_00380 biotin/lipoyl attachment domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; pyruvate carboxylase 76421..78232 Brachyspira murdochii DSM 12563 9141031 YP_003632374.1 CDS Bmur_0064 NC_014150.1 78264 79640 D TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; KEGG: bhy:BHWA1_00381 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl- CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 78264..79640 Brachyspira murdochii DSM 12563 9141032 YP_003632375.1 CDS Bmur_0065 NC_014150.1 79933 80871 D PFAM: glycosyl transferase 2; KEGG: pdi:BDI_1651 glycosyl transferase; glycosyl transferase 79933..80871 Brachyspira murdochii DSM 12563 9141033 YP_003632376.1 CDS Bmur_0066 NC_014150.1 80861 82399 D PFAM: glycosyl transferase 39; KEGG: tye:THEYE_A0589 hypothetical protein; glycosyl transferase 80861..82399 Brachyspira murdochii DSM 12563 9141034 YP_003632377.1 CDS Bmur_0067 NC_014150.1 82452 83408 R PFAM: Uncharacterised conserved protein UCP018688; KEGG: bhy:BHWA1_00382 hypothetical protein; hypothetical protein complement(82452..83408) Brachyspira murdochii DSM 12563 9141035 YP_003632378.1 CDS Bmur_0069 NC_014150.1 84149 84481 D PFAM: helix-turn-helix HxlR type; KEGG: bhy:BHWA1_00384 transcriptional regulator; HxlR family transcriptional regulator 84149..84481 Brachyspira murdochii DSM 12563 9141037 YP_003632379.1 CDS Bmur_0070 NC_014150.1 84482 85015 R KEGG: bhy:BHWA1_00385 hypothetical protein; hypothetical protein complement(84482..85015) Brachyspira murdochii DSM 12563 9141038 YP_003632380.1 CDS Bmur_0071 NC_014150.1 85015 86322 R PFAM: protein of unknown function UPF0118; KEGG: bhy:BHWA1_00386 PerM, predicted permease; hypothetical protein complement(85015..86322) Brachyspira murdochii DSM 12563 9141039 YP_003632381.1 CDS Bmur_0072 NC_014150.1 86751 87104 D PFAM: ankyrin; KEGG: bhy:BHWA1_00390 ankyrin repeat-containing protein; ankyrin 86751..87104 Brachyspira murdochii DSM 12563 9141042 YP_003632382.1 CDS Bmur_0073 NC_014150.1 87107 88867 R KEGG: bhy:BHWA1_00391 hypothetical protein; hypothetical protein complement(87107..88867) Brachyspira murdochii DSM 12563 9141043 YP_003632383.1 CDS Bmur_0074 NC_014150.1 89287 92457 R PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_00506 acriflavin resistance protein; acriflavin resistance protein complement(89287..92457) Brachyspira murdochii DSM 12563 9141044 YP_003632384.1 CDS Bmur_0075 NC_014150.1 92531 94036 R KEGG: bhy:BHWA1_00505 outer membrane component of multidrug efflux; outer membrane component of multidrug efflux complement(92531..94036) Brachyspira murdochii DSM 12563 9141045 YP_003632385.1 CDS Bmur_0076 NC_014150.1 94259 94966 D TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bhy:BHWA1_00504 trehalose operon repressor; SMART: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; GntR family transcriptional regulator 94259..94966 Brachyspira murdochii DSM 12563 9141046 YP_003632386.1 CDS Bmur_0077 NC_014150.1 95160 97091 D KEGG: bhy:BHWA1_00503 trehalose PTS system, IIABC component; TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIB/cysteine, phosphorylation site; phosphotransferase system EIIC; PTS system trehalose-specific transporter subunit IIBC 95160..97091 Brachyspira murdochii DSM 12563 9141047 YP_003632387.1 CDS Bmur_0078 NC_014150.1 97208 98878 D TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: bhy:BHWA1_00502 trehalose-6-phosphate hydrolase; SMART: alpha amylase catalytic sub domain; alpha,alpha-phosphotrehalase 97208..98878 Brachyspira murdochii DSM 12563 9141048 YP_003632388.1 CDS Bmur_0079 NC_014150.1 99052 99618 D PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_00501 transcriptional regulator, TetR family; TetR family transcriptional regulator 99052..99618 Brachyspira murdochii DSM 12563 9141049 YP_003632389.1 CDS Bmur_0080 NC_014150.1 99722 100723 D KEGG: bhy:BHWA1_00500 glycerol-3-phosphate dehydrogenase (D(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; glycerol-3-phosphate dehydrogenase 99722..100723 Brachyspira murdochii DSM 12563 9141050 YP_003632390.1 CDS Bmur_0081 NC_014150.1 100724 101131 R KEGG: bhy:BHWA1_00499 hypothetical protein; hypothetical protein complement(100724..101131) Brachyspira murdochii DSM 12563 9141051 YP_003632391.1 CDS Bmur_0082 NC_014150.1 101250 102308 D PFAM: protein of unknown function DUF1385; KEGG: bhy:BHWA1_00498 predicted metal-dependent enzyme; hypothetical protein 101250..102308 Brachyspira murdochii DSM 12563 9141052 YP_003632392.1 CDS Bmur_0083 NC_014150.1 102299 103426 D KEGG: bhy:BHWA1_00497 hypothetical protein; hypothetical protein 102299..103426 Brachyspira murdochii DSM 12563 9141053 YP_003632393.1 CDS Bmur_0084 NC_014150.1 103426 104454 D KEGG: bhy:BHWA1_00496 transcriptional regulator; transcriptional regulator 103426..104454 Brachyspira murdochii DSM 12563 9141054 YP_003632394.1 CDS Bmur_0085 NC_014150.1 104532 106619 R PFAM: glutamine synthetase catalytic region; KEGG: bhy:BHWA1_00495 glutamine synthetase; glutamine synthetase complement(104532..106619) Brachyspira murdochii DSM 12563 9141055 YP_003632395.1 CDS Bmur_0086 NC_014150.1 106753 107571 R KEGG: bhy:BHWA1_00494 hypothetical protein; hypothetical protein complement(106753..107571) Brachyspira murdochii DSM 12563 9141056 YP_003632396.1 CDS Bmur_0087 NC_014150.1 107576 108709 R PFAM: CheB methylesterase; response regulator receiver; KEGG: bhy:BHWA1_00493 response regulator receiver modulated CheB methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase complement(107576..108709) Brachyspira murdochii DSM 12563 9141057 YP_003632397.1 CDS Bmur_0088 NC_014150.1 108737 109330 R PFAM: CheD family protein; KEGG: bhy:BHWA1_00492 chemotaxis protein CheD; stimulates methylation of MCP proteins; chemotaxis protein CheD complement(108737..109330) Brachyspira murdochii DSM 12563 9141058 YP_003632398.1 CDS Bmur_0089 NC_014150.1 109346 110197 R PFAM: MCP methyltransferase CheR-type; KEGG: bhy:BHWA1_00491 chemotaxis protein methyltransferase CheR; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR complement(109346..110197) Brachyspira murdochii DSM 12563 9141059 YP_003632399.1 CDS Bmur_0090 NC_014150.1 110220 110750 R KEGG: bhy:BHWA1_00490 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; chemotaxis protein CheW complement(110220..110750) Brachyspira murdochii DSM 12563 9141060 YP_003632400.1 CDS Bmur_0091 NC_014150.1 110762 112870 R KEGG: bhy:BHWA1_00489 chemotaxis histidine kinase CheA; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; CheA signal transduction histidine kinase complement(110762..112870) Brachyspira murdochii DSM 12563 9141061 YP_003632401.1 CDS Bmur_0092 NC_014150.1 112930 113298 R KEGG: bhy:BHWA1_00488 chemotaxis response regulator CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(112930..113298) Brachyspira murdochii DSM 12563 9141062 YP_003632402.1 CDS Bmur_0093 NC_014150.1 113318 113581 R KEGG: bhy:BHWA1_00487 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(113318..113581) Brachyspira murdochii DSM 12563 9141063 YP_003632403.1 CDS Bmur_0094 NC_014150.1 113606 115537 R KEGG: bhy:BHWA1_00486 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(113606..115537) Brachyspira murdochii DSM 12563 9141064 YP_003632404.1 CDS Bmur_0095 NC_014150.1 115850 117742 R KEGG: bhy:BHWA1_00485 D+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase complement(115850..117742) Brachyspira murdochii DSM 12563 9141065 YP_003632405.1 CDS Bmur_0096 NC_014150.1 117889 118476 D KEGG: bhy:BHWA1_00484 predicted flavin-nucleotide- binding protein; flavin-nucleotide-binding protein 117889..118476 Brachyspira murdochii DSM 12563 9141066 YP_003632406.1 CDS Bmur_0097 NC_014150.1 118593 119582 D KEGG: bhy:BHWA1_00483 cAMP-binding protein; PFAM: cyclic nucleotide-binding; TPR repeat- containing protein; SMART: cyclic nucleotide-binding; Tetratricopeptide repeat; Crp/Fnr family transcriptional regulator 118593..119582 Brachyspira murdochii DSM 12563 9141067 YP_003632407.1 CDS Bmur_0098 NC_014150.1 119604 120239 D KEGG: bhy:BHWA1_00482 cAMP-dependent protein kinase regulatory chain; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 119604..120239 Brachyspira murdochii DSM 12563 9141068 YP_003632408.1 CDS Bmur_0099 NC_014150.1 120390 121082 D KEGG: bhy:BHWA1_00481 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 120390..121082 Brachyspira murdochii DSM 12563 9141069 YP_003632409.1 CDS Bmur_0101 NC_014150.1 122051 123331 R KEGG: bhy:BHWA1_00478 hypothetical protein; hypothetical protein complement(122051..123331) Brachyspira murdochii DSM 12563 9141071 YP_003632410.1 CDS Bmur_0102 NC_014150.1 123376 125004 R PFAM: ABC-type uncharacterised transport system; KEGG: bhy:BHWA1_00477 ABC transporter; ABC transporter complement(123376..125004) Brachyspira murdochii DSM 12563 9141072 YP_003632411.1 CDS Bmur_0103 NC_014150.1 125290 126444 D TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: bhy:BHWA1_00476 1-deoxy-D-xylulose-5- phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 125290..126444 Brachyspira murdochii DSM 12563 9141073 YP_003632412.1 CDS Bmur_0104 NC_014150.1 126528 128264 D TIGRFAM: prolyl-tRNA synthetase; KEGG: bhy:BHWA1_00474 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon- binding domain protein; prolyl-tRNA synthetase 126528..128264 Brachyspira murdochii DSM 12563 9141074 YP_003632413.1 CDS Bmur_0105 NC_014150.1 128337 128774 D PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00473 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 128337..128774 Brachyspira murdochii DSM 12563 9141075 YP_003632414.1 CDS Bmur_0106 NC_014150.1 128780 129850 R PFAM: permease YjgP/YjgQ family protein; KEGG: bhy:BHWA1_00472 permease; YjgP/YjgQ family permease complement(128780..129850) Brachyspira murdochii DSM 12563 9141076 YP_003632415.1 CDS Bmur_0107 NC_014150.1 129850 130731 R PFAM: Protein of unknown function DUF2225; KEGG: bhy:BHWA1_00471 hypothetical protein; hypothetical protein complement(129850..130731) Brachyspira murdochii DSM 12563 9141077 YP_003632416.1 CDS Bmur_0108 NC_014150.1 130801 131931 R KEGG: bhy:BHWA1_00470 hypothetical protein; hypothetical protein complement(130801..131931) Brachyspira murdochii DSM 12563 9141078 YP_003632417.1 CDS Bmur_0109 NC_014150.1 131906 133441 R KEGG: bhy:BHWA1_00469 N-acetylglucosamine-1- phosphate uridyltransferase; PFAM: transferase hexapeptide repeat containing protein; glucosamine-1-phosphate N-acetyltransferase complement(131906..133441) Brachyspira murdochii DSM 12563 9141079 YP_003632418.1 CDS Bmur_0110 NC_014150.1 133452 133991 R KEGG: bhy:BHWA1_00468 hypothetical protein; hypothetical protein complement(133452..133991) Brachyspira murdochii DSM 12563 9141080 YP_003632419.1 CDS Bmur_0111 NC_014150.1 134096 135490 R KEGG: bhy:BHWA1_00467 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(134096..135490) Brachyspira murdochii DSM 12563 9141081 YP_003632420.1 CDS Bmur_0112 NC_014150.1 135616 136536 D PFAM: methylenetetrahydrofolate reductase; KEGG: bhy:BHWA1_00466 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 135616..136536 Brachyspira murdochii DSM 12563 9141082 YP_003632421.1 CDS Bmur_0113 NC_014150.1 136898 137245 D KEGG: smu:SMU.987 cell wall-associated protein precursor WapA; hypothetical protein 136898..137245 Brachyspira murdochii DSM 12563 9141083 YP_003632422.1 CDS Bmur_0114 NC_014150.1 137315 138322 D KEGG: cts:Ctha_1248 hypothetical protein; hypothetical protein 137315..138322 Brachyspira murdochii DSM 12563 9141084 YP_003632423.1 CDS Bmur_0115 NC_014150.1 138338 138922 D KEGG: tde:TDE0731 hypothetical protein; hypothetical protein 138338..138922 Brachyspira murdochii DSM 12563 9141085 YP_003632424.1 CDS Bmur_0116 NC_014150.1 138937 139914 D KEGG: asa:ASA_3240 hypothetical protein; hypothetical protein 138937..139914 Brachyspira murdochii DSM 12563 9141086 YP_003632425.1 CDS Bmur_0119 NC_014150.1 144133 145440 D TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bhy:BHWA1_02543 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 144133..145440 Brachyspira murdochii DSM 12563 9141089 YP_003632426.1 CDS Bmur_0120 NC_014150.1 145561 147420 R PFAM: methyltransferase type 12; KEGG: eel:EUBELI_00268 hypothetical protein; methyltransferase type 12 complement(145561..147420) Brachyspira murdochii DSM 12563 9141090 YP_003632427.1 CDS Bmur_0121 NC_014150.1 147579 148964 R KEGG: hba:Hbal_2322 glycosyl transferase 2; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(147579..148964) Brachyspira murdochii DSM 12563 9141091 YP_003632428.1 CDS Bmur_0122 NC_014150.1 148989 150125 R PFAM: glycosyl transferase 2; KEGG: mst:Msp_0538 glycosyltransferase; glycosyl transferase complement(148989..150125) Brachyspira murdochii DSM 12563 9141092 YP_003632429.1 CDS Bmur_0123 NC_014150.1 150169 151611 R PFAM: glycosyl transferase 2; KEGG: ter:Tery_2950 glycosyl transferase; glycosyl transferase complement(150169..151611) Brachyspira murdochii DSM 12563 9141093 YP_003632430.1 CDS Bmur_0124 NC_014150.1 151604 152641 R PFAM: glycosyl transferase 2; KEGG: bfs:BF2599 LPS biosynthesis related glycosyltransferase; glycosyl transferase complement(151604..152641) Brachyspira murdochii DSM 12563 9141094 YP_003632431.1 CDS Bmur_0125 NC_014150.1 152638 153660 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: vfi:VF_0186 dTDP-glucose 4,6-dehydratase; NAD-dependent epimerase/dehydratase complement(152638..153660) Brachyspira murdochii DSM 12563 9141095 YP_003632432.1 CDS Bmur_0126 NC_014150.1 153710 154957 R PFAM: methyltransferase type 12; KEGG: sun:SUN_2139 hypothetical protein; methyltransferase type 12 complement(153710..154957) Brachyspira murdochii DSM 12563 9141096 YP_003632433.1 CDS Bmur_0127 NC_014150.1 154968 156749 R PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: sun:SUN_2140 acetolactate synthase, large subunit; thiamine pyrophosphate TPP binding domain-containing protein complement(154968..156749) Brachyspira murdochii DSM 12563 9141097 YP_003632434.1 CDS Bmur_0128 NC_014150.1 156758 157582 R PFAM: pyruvate carboxyltransferase; KEGG: sun:SUN_2142 hypothetical protein; pyruvate carboxyltransferase complement(156758..157582) Brachyspira murdochii DSM 12563 9141098 YP_003632435.1 CDS Bmur_0129 NC_014150.1 157582 158889 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ypy:YPK_3189 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(157582..158889) Brachyspira murdochii DSM 12563 9141099 YP_003632436.1 CDS Bmur_0130 NC_014150.1 158903 159964 R KEGG: mae:Maeo_0387 CDP-glucose 4,6-dehydratase; TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; CDP-glucose 4,6-dehydratase complement(158903..159964) Brachyspira murdochii DSM 12563 9141100 YP_003632437.1 CDS Bmur_0131 NC_014150.1 159946 160740 R KEGG: bhy:BHWA1_02683 glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase complement(159946..160740) Brachyspira murdochii DSM 12563 9141101 YP_003632438.1 CDS Bmur_0132 NC_014150.1 160962 162173 D PFAM: glycosyl transferase 2; KEGG: tde:TDE1433 glycosyl transferase, group 2 family protein; glycosyl transferase 160962..162173 Brachyspira murdochii DSM 12563 9141102 YP_003632439.1 CDS Bmur_0133 NC_014150.1 162181 163926 D PFAM: glycosyl transferase 2; KEGG: rco:RC0461 glycosyltransferase; glycosyl transferase 162181..163926 Brachyspira murdochii DSM 12563 9141103 YP_003632440.1 CDS Bmur_0134 NC_014150.1 163923 165044 D TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pmo:Pmob_1284 UDP-N-acetylglucosamine 2- epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 163923..165044 Brachyspira murdochii DSM 12563 9141104 YP_003632441.1 CDS Bmur_0135 NC_014150.1 165046 166155 D PFAM: Radical SAM domain protein; KEGG: ret:RHE_CH01520 beta-D-1,6 glucosyltransferase; radical SAM protein 165046..166155 Brachyspira murdochii DSM 12563 9141105 YP_003632442.1 CDS Bmur_0136 NC_014150.1 166145 168385 D PFAM: glycosyl transferase 2; glycosyl transferase group 1; KEGG: rpr:RP336 hypothetical protein; glycosyl transferase 166145..168385 Brachyspira murdochii DSM 12563 9141106 YP_003632443.1 CDS Bmur_0137 NC_014150.1 168382 169212 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: rms:RMA_0473 dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase 168382..169212 Brachyspira murdochii DSM 12563 9141107 YP_003632444.1 CDS Bmur_0138 NC_014150.1 169218 170228 D PFAM: polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis domain protein; KEGG: geo:Geob_1458 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 169218..170228 Brachyspira murdochii DSM 12563 9141108 YP_003632445.1 CDS Bmur_0139 NC_014150.1 170282 171568 D KEGG: cyc:PCC7424_4582 hypothetical protein; hypothetical protein 170282..171568 Brachyspira murdochii DSM 12563 9141109 YP_003632446.1 CDS Bmur_0140 NC_014150.1 171686 174289 D PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ere:EUBREC_2763 MurB family protein; coenzyme F420 hydrogenase 171686..174289 Brachyspira murdochii DSM 12563 9141110 YP_003632447.1 CDS Bmur_0141 NC_014150.1 174636 175748 D KEGG: bhy:BHWA1_00462 dynein heavy chain; dynein heavy chain 174636..175748 Brachyspira murdochii DSM 12563 9141111 YP_003632448.1 CDS Bmur_0142 NC_014150.1 175794 177560 R PFAM: protein of unknown function DUF262; KEGG: ppg:PputGB1_3189 hypothetical protein; hypothetical protein complement(175794..177560) Brachyspira murdochii DSM 12563 9141112 YP_003632449.1 CDS Bmur_0143 NC_014150.1 177606 183434 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bhy:BHWA1_00461 exinuclease ABC subunit A; SMART: AAA ATPase; excinuclease ABC subunit A complement(177606..183434) Brachyspira murdochii DSM 12563 9141113 YP_003632450.1 CDS Bmur_0144 NC_014150.1 183864 184403 R PFAM: transcriptional regulator PadR family protein; transcriptional regulator PadR-like; KEGG: cdl:CDR20291_2964 transcriptional regulator, PadR-like family; transcriptional regulator, PadR-like family; PadR family transcriptional regulator complement(183864..184403) Brachyspira murdochii DSM 12563 9141114 YP_003632451.1 CDS Bmur_0145 NC_014150.1 185031 185342 D KEGG: bhy:BHWA1_00458 phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 185031..185342 Brachyspira murdochii DSM 12563 9141115 YP_003632452.1 CDS Bmur_0146 NC_014150.1 185396 186778 D PFAM: gluconate transporter; KEGG: bhy:BHWA1_00457 gluconate transporter; gluconate transporter 185396..186778 Brachyspira murdochii DSM 12563 9141116 YP_003632453.1 CDS Bmur_0147 NC_014150.1 186853 187287 D TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: bhy:BHWA1_00456 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 186853..187287 Brachyspira murdochii DSM 12563 9141117 YP_003632454.1 CDS Bmur_0148 NC_014150.1 187326 188141 D KEGG: bhy:BHWA1_00455 hypothetical protein; hypothetical protein 187326..188141 Brachyspira murdochii DSM 12563 9141118 YP_003632455.1 CDS Bmur_0149 NC_014150.1 188145 188891 D KEGG: bhy:BHWA1_00454 hypothetical protein; hypothetical protein 188145..188891 Brachyspira murdochii DSM 12563 9141119 YP_003632456.1 CDS Bmur_0150 NC_014150.1 189193 212172 R PFAM: apolipoprotein A1/A4/E; RepA / Rep KID repeat- containing protein; KEGG: bhy:BHWA1_00453 hypothetical protein; apolipoprotein A1/A4/E complement(189193..212172) Brachyspira murdochii DSM 12563 9141120 YP_003632457.1 CDS Bmur_0151 NC_014150.1 212802 214223 D PFAM: sulfatase; KEGG: bhy:BHWA1_00429 sulfatase; sulfatase 212802..214223 Brachyspira murdochii DSM 12563 9141121 YP_003632458.1 CDS Bmur_0152 NC_014150.1 214265 215308 D PFAM: extracellular solute-binding protein family 3; KEGG: bhy:BHWA1_00430 ABC transporter periplasmic binding protein; ABC transporter substrate-binding protein 214265..215308 Brachyspira murdochii DSM 12563 9141122 YP_003632459.1 CDS Bmur_0153 NC_014150.1 215342 216175 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00431 ABC-type nitrate/sulfonate/bicarbonate transport system, permease componen; nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein 215342..216175 Brachyspira murdochii DSM 12563 9141123 YP_003632460.1 CDS Bmur_0154 NC_014150.1 216188 216982 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00432 ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, permease component; nitrate/sulfonate/bicarbonate ABC transporter permease 216188..216982 Brachyspira murdochii DSM 12563 9141124 YP_003632461.1 CDS Bmur_0155 NC_014150.1 217002 217760 D KEGG: bhy:BHWA1_00433 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 217002..217760 Brachyspira murdochii DSM 12563 9141125 YP_003632462.1 CDS Bmur_0156 NC_014150.1 217780 218532 D KEGG: bhy:BHWA1_00434 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 217780..218532 Brachyspira murdochii DSM 12563 9141126 YP_003632463.1 CDS Bmur_0157 NC_014150.1 218578 219612 R KEGG: bhy:BHWA1_00435 transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(218578..219612) Brachyspira murdochii DSM 12563 9141127 YP_003632464.1 CDS Bmur_0158 NC_014150.1 220558 221085 D KEGG: bhy:BHWA1_00440 hypothetical protein; hypothetical protein 220558..221085 Brachyspira murdochii DSM 12563 9141128 YP_003632465.1 CDS Bmur_0159 NC_014150.1 221627 222322 R PFAM: alanine racemase domain protein; KEGG: bhy:BHWA1_00441 hypothetical protein; alanine racemase complement(221627..222322) Brachyspira murdochii DSM 12563 9141129 YP_003632466.1 CDS Bmur_0160 NC_014150.1 222774 223241 D PFAM: protein of unknown function DUF327; KEGG: bhy:BHWA1_00442 hypothetical protein; hypothetical protein 222774..223241 Brachyspira murdochii DSM 12563 9141130 YP_003632467.1 CDS Bmur_0161 NC_014150.1 223238 223918 D PFAM: peptidase M22 glycoprotease; KEGG: bhy:BHWA1_00443 inactive metal-dependent protease, molecular chaperone; peptidase M22 glycoprotease 223238..223918 Brachyspira murdochii DSM 12563 9141131 YP_003632468.1 CDS Bmur_0162 NC_014150.1 224065 226203 D KEGG: bhy:BHWA1_00444 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 224065..226203 Brachyspira murdochii DSM 12563 9141132 YP_003632469.1 CDS Bmur_0163 NC_014150.1 226255 227325 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_00173 TPR domain-containing protein; hypothetical protein complement(226255..227325) Brachyspira murdochii DSM 12563 9141133 YP_003632470.1 CDS Bmur_0164 NC_014150.1 227702 228199 R KEGG: bhy:BHWA1_00172 dihydrofolate reductase; PFAM: dihydrofolate reductase region; dihydrofolate reductase complement(227702..228199) Brachyspira murdochii DSM 12563 9141134 YP_003632471.1 CDS Bmur_0165 NC_014150.1 228196 228996 R TIGRFAM: thymidylate synthase; KEGG: bhy:BHWA1_00171 thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase complement(228196..228996) Brachyspira murdochii DSM 12563 9141135 YP_003632472.1 CDS Bmur_0166 NC_014150.1 229153 230397 R TIGRFAM: peptidase T; KEGG: bhy:BHWA1_00150 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T complement(229153..230397) Brachyspira murdochii DSM 12563 9141136 YP_003632473.1 CDS Bmur_0167 NC_014150.1 230441 232003 R PFAM: AbgT transporter; KEGG: bhy:BHWA1_00149 ABG transport, transporter family; AbgT transporter complement(230441..232003) Brachyspira murdochii DSM 12563 9141137 YP_003632474.1 CDS Bmur_0168 NC_014150.1 232367 232738 D KEGG: bhy:BHWA1_00170 hypothetical protein; hypothetical protein 232367..232738 Brachyspira murdochii DSM 12563 9141138 YP_003632475.1 CDS Bmur_0169 NC_014150.1 232779 233051 D KEGG: bhy:BHWA1_00169 hypothetical protein; hypothetical protein 232779..233051 Brachyspira murdochii DSM 12563 9141139 YP_003632476.1 CDS Bmur_0170 NC_014150.1 233194 234945 D PFAM: ribonuclease BN; KEGG: bhy:BHWA1_00167 ribonuclease BN, ribonuclease BN-like family; ribonuclease BN 233194..234945 Brachyspira murdochii DSM 12563 9141141 YP_003632477.1 CDS Bmur_0171 NC_014150.1 234993 236246 R KEGG: bhy:BHWA1_00358 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; homoserine dehydrogenase complement(234993..236246) Brachyspira murdochii DSM 12563 9141142 YP_003632478.1 CDS Bmur_0172 NC_014150.1 236583 236750 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_00357 hypothetical protein; 4Fe-4S ferredoxin 236583..236750 Brachyspira murdochii DSM 12563 9141143 YP_003632479.1 CDS Bmur_0173 NC_014150.1 236833 237621 D KEGG: bhy:BHWA1_00356 D repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO 236833..237621 Brachyspira murdochii DSM 12563 9141144 YP_003632480.1 CDS Bmur_0174 NC_014150.1 237610 238275 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bhy:BHWA1_00355 phosphatase, HAD family; haloacid dehalogenase complement(237610..238275) Brachyspira murdochii DSM 12563 9141145 YP_003632481.1 CDS Bmur_0175 NC_014150.1 238299 239264 R KEGG: bhy:BHWA1_00354 hypothetical protein; hypothetical protein complement(238299..239264) Brachyspira murdochii DSM 12563 9141146 YP_003632482.1 CDS Bmur_0176 NC_014150.1 239290 241272 R PFAM: protein of unknown function DUF342; KEGG: bhy:BHWA1_00353 polymerase; hypothetical protein complement(239290..241272) Brachyspira murdochii DSM 12563 9141147 YP_003632483.1 CDS Bmur_0177 NC_014150.1 241288 242106 R KEGG: bhy:BHWA1_00352 RNA polymerase sigma factor WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; RNA polymerase sigma 28 subunit FliA/WhiG complement(241288..242106) Brachyspira murdochii DSM 12563 9141148 YP_003632484.1 CDS Bmur_0178 NC_014150.1 242356 242949 R KEGG: bhy:BHWA1_00351 hypothetical protein; hypothetical protein complement(242356..242949) Brachyspira murdochii DSM 12563 9141149 YP_003632485.1 CDS Bmur_0179 NC_014150.1 242984 243847 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: bhy:BHWA1_00350 flagellar synthesis regulator FleN; cobyrinic acid ac-diamide synthase complement(242984..243847) Brachyspira murdochii DSM 12563 9141150 YP_003632486.1 CDS Bmur_0180 NC_014150.1 243883 245856 R KEGG: bhy:BHWA1_00349 flagellar biosynthesis regulator FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; GTP-binding signal recognition particle SRP54 G- domain-containing protein complement(243883..245856) Brachyspira murdochii DSM 12563 9141151 YP_003632487.1 CDS Bmur_0181 NC_014150.1 245934 246107 R KEGG: bhy:BHWA1_00348 hypothetical protein; hypothetical protein complement(245934..246107) Brachyspira murdochii DSM 12563 9141152 YP_003632488.1 CDS Bmur_0182 NC_014150.1 246172 248292 R PFAM: type III secretion FHIPEP protein; KEGG: bhy:BHWA1_00347 flagellar biosynthesis protein A; type III secretion FHIPEP protein complement(246172..248292) Brachyspira murdochii DSM 12563 9141153 YP_003632489.1 CDS Bmur_0183 NC_014150.1 248305 249504 R KEGG: bhy:BHWA1_00346 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB complement(248305..249504) Brachyspira murdochii DSM 12563 9141154 YP_003632490.1 CDS Bmur_0184 NC_014150.1 249501 250304 R KEGG: bhy:BHWA1_00345 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR complement(249501..250304) Brachyspira murdochii DSM 12563 9141155 YP_003632491.1 CDS Bmur_0185 NC_014150.1 250344 250613 R KEGG: bhy:BHWA1_00344 flagellar biosynthetic protein (FliQ); TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; flagellar biosynthetic protein FliQ complement(250344..250613) Brachyspira murdochii DSM 12563 9141156 YP_003632492.1 CDS Bmur_0186 NC_014150.1 250666 251454 R KEGG: bhy:BHWA1_00343 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP complement(250666..251454) Brachyspira murdochii DSM 12563 9141157 YP_003632493.1 CDS Bmur_0187 NC_014150.1 251673 252173 R PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00342 acetyltransferase, GT family; N-acetyltransferase GCN5 complement(251673..252173) Brachyspira murdochii DSM 12563 9141158 YP_003632494.1 CDS Bmur_0188 NC_014150.1 252351 253067 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_00341 hypothetical protein; hypothetical protein 252351..253067 Brachyspira murdochii DSM 12563 9141159 YP_003632495.1 CDS Bmur_0189 NC_014150.1 253698 256097 D KEGG: bhy:BHWA1_00340 membrane carboxypeptidase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase 51; penicillin- binding protein transpeptidase; penicillin-binding protein 253698..256097 Brachyspira murdochii DSM 12563 9141160 YP_003632496.1 CDS Bmur_0190 NC_014150.1 256124 258001 D PFAM: TraB determinant protein; KEGG: bhy:BHWA1_00339 hypothetical protein; TraB determinant protein 256124..258001 Brachyspira murdochii DSM 12563 9141161 YP_003632497.1 CDS Bmur_0191 NC_014150.1 258009 259838 R KEGG: cai:Caci_4166 hypothetical protein; hypothetical protein complement(258009..259838) Brachyspira murdochii DSM 12563 9141162 YP_003632498.1 CDS Bmur_0192 NC_014150.1 259835 260884 R KEGG: pmt:PMT0296 hypothetical protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(259835..260884) Brachyspira murdochii DSM 12563 9141163 YP_003632499.1 CDS Bmur_0193 NC_014150.1 261167 262522 D KEGG: bhy:BHWA1_00736 UDP-N-acetylmuramoylalanyl-D- glutamyl-2,6-diaminopimelate--D-alanyl- D-alanyl ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-di aminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase 261167..262522 Brachyspira murdochii DSM 12563 9141164 YP_003632500.1 CDS Bmur_0194 NC_014150.1 262525 263286 D KEGG: bhy:BHWA1_00735 hypothetical protein; hypothetical protein 262525..263286 Brachyspira murdochii DSM 12563 9141165 YP_003632501.1 CDS Bmur_0195 NC_014150.1 263421 267020 R KEGG: bhy:BHWA1_00612 DNA segregation ATPase FtsK/SpoIIIE-like protein; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma; AAA ATPase; DNA translocase FtsK complement(263421..267020) Brachyspira murdochii DSM 12563 9141166 YP_003632502.1 CDS Bmur_0196 NC_014150.1 267036 267845 R PFAM: bacitracin resistance protein BacA; KEGG: bhy:BHWA1_00613 undecaprenyl pyrophosphate phosphatase; bacitracin resistance protein BacA complement(267036..267845) Brachyspira murdochii DSM 12563 9141167 YP_003632503.1 CDS Bmur_0197 NC_014150.1 268017 268745 R KEGG: bhy:BHWA1_00640 hypothetical protein; hypothetical protein complement(268017..268745) Brachyspira murdochii DSM 12563 9141168 YP_003632504.1 CDS Bmur_0198 NC_014150.1 268876 275883 R KEGG: bhy:BHWA1_00641 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; WD40 domain protein beta Propeller; hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(268876..275883) Brachyspira murdochii DSM 12563 9141169 YP_003632505.1 CDS Bmur_0199 NC_014150.1 275986 276318 R KEGG: bhy:BHWA1_00642 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(275986..276318) Brachyspira murdochii DSM 12563 9141170 YP_003632506.1 CDS Bmur_0200 NC_014150.1 276520 277038 R KEGG: bhy:BHWA1_00643 hypothetical protein; hypothetical protein complement(276520..277038) Brachyspira murdochii DSM 12563 9141171 YP_003632507.1 CDS Bmur_0201 NC_014150.1 277047 277577 R KEGG: bhy:BHWA1_00644 hypothetical protein; hypothetical protein complement(277047..277577) Brachyspira murdochii DSM 12563 9141172 YP_003632508.1 CDS Bmur_0202 NC_014150.1 277807 278394 R KEGG: bhy:BHWA1_00645 regulatory protein TetR family; TetR family transcriptional regulator complement(277807..278394) Brachyspira murdochii DSM 12563 9141173 YP_003632509.1 CDS Bmur_0203 NC_014150.1 278710 281883 D PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_00646 acriflavin resistance protein; acriflavin resistance protein 278710..281883 Brachyspira murdochii DSM 12563 9141174 YP_003632510.1 CDS Bmur_0204 NC_014150.1 282218 283849 R KEGG: bhy:BHWA1_00165 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; molecular chaperone GroEL complement(282218..283849) Brachyspira murdochii DSM 12563 9141175 YP_003632511.1 CDS Bmur_0205 NC_014150.1 284041 284250 R KEGG: bhy:BHWA1_00164 30S ribosomal protein S21 TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 complement(284041..284250) Brachyspira murdochii DSM 12563 9141176 YP_003632512.1 CDS Bmur_0206 NC_014150.1 284513 285448 R KEGG: bhy:BHWA1_00161 hypothetical protein; hypothetical protein complement(284513..285448) Brachyspira murdochii DSM 12563 9141179 YP_003632513.1 CDS Bmur_0207 NC_014150.1 285502 286392 R KEGG: bhy:BHWA1_00691 hypothetical protein; hypothetical protein complement(285502..286392) Brachyspira murdochii DSM 12563 9141180 YP_003632514.1 CDS Bmur_0208 NC_014150.1 287066 287872 R PFAM: protein of unknown function DUF140; KEGG: bhy:BHWA1_00630 Ttg2B, ABC-type transport system, permease component; hypothetical protein complement(287066..287872) Brachyspira murdochii DSM 12563 9141181 YP_003632515.1 CDS Bmur_0209 NC_014150.1 287894 289297 R KEGG: bhy:BHWA1_00631 DNA helicase, DnaB type; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; replicative DNA helicase complement(287894..289297) Brachyspira murdochii DSM 12563 9141182 YP_003632516.1 CDS Bmur_0210 NC_014150.1 289335 289853 R KEGG: bhy:BHWA1_00632 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9-like; 50S ribosomal protein L9 complement(289335..289853) Brachyspira murdochii DSM 12563 9141183 YP_003632517.1 CDS Bmur_0211 NC_014150.1 290039 290554 D PFAM: flavodoxin/nitric oxide synthase; KEGG: bhy:BHWA1_00633 flavodoxin; flavodoxin/nitric oxide synthase 290039..290554 Brachyspira murdochii DSM 12563 9141184 YP_003632518.1 CDS Bmur_0212 NC_014150.1 290633 291445 R KEGG: bhy:BHWA1_00634 TatD protein; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase complement(290633..291445) Brachyspira murdochii DSM 12563 9141185 YP_003632519.1 CDS Bmur_0213 NC_014150.1 291466 291816 R PFAM: histidine triad (HIT) protein; KEGG: bhy:BHWA1_00635 protein kinase C; histidine triad (HIT) protein complement(291466..291816) Brachyspira murdochii DSM 12563 9141186 YP_003632520.1 CDS Bmur_0214 NC_014150.1 291995 292801 D PFAM: zinc/iron permease; KEGG: bhy:BHWA1_00636 zinc transporter ZupT; zinc/iron permease 291995..292801 Brachyspira murdochii DSM 12563 9141187 YP_003632521.1 CDS Bmur_0215 NC_014150.1 292822 293772 D KEGG: bhy:BHWA1_00639 hydrolase of the alpha/beta superfamily; alpha/beta superfamily hydrolase 292822..293772 Brachyspira murdochii DSM 12563 9141188 YP_003632522.1 CDS Bmur_0216 NC_014150.1 293805 294743 R KEGG: bhy:BHWA1_00660 hypothetical protein; hypothetical protein complement(293805..294743) Brachyspira murdochii DSM 12563 9141189 YP_003632523.1 CDS Bmur_0217 NC_014150.1 294808 296145 R KEGG: bhy:BHWA1_00118 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(294808..296145) Brachyspira murdochii DSM 12563 9141190 YP_003632524.1 CDS Bmur_0218 NC_014150.1 296228 297115 R KEGG: bhy:BHWA1_00117 von Willebrand factor type A (vWA) domain containing protein; PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; hypothetical protein complement(296228..297115) Brachyspira murdochii DSM 12563 9141191 YP_003632525.1 CDS Bmur_0219 NC_014150.1 297232 298380 R PFAM: ankyrin; KEGG: bhy:BHWA1_00116 ankyrin repeat-containing protein; ankyrin complement(297232..298380) Brachyspira murdochii DSM 12563 9141192 YP_003632526.1 CDS Bmur_0220 NC_014150.1 298546 299376 D SMART: beta-lactamase domain protein; KEGG: bhy:BHWA1_00115 metallo-beta-lactamase; beta-lactamase 298546..299376 Brachyspira murdochii DSM 12563 9141193 YP_003632527.1 CDS Bmur_0222 NC_014150.1 299915 300289 R KEGG: bhy:BHWA1_00113 truncated hemoglobin; hypothetical protein complement(299915..300289) Brachyspira murdochii DSM 12563 9141195 YP_003632528.1 CDS Bmur_0223 NC_014150.1 300495 301337 R KEGG: bhy:BHWA1_00112 3-hydroxybutyryl-CoA dehydratase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxybutyryl-CoA dehydrogenase complement(300495..301337) Brachyspira murdochii DSM 12563 9141196 YP_003632529.1 CDS Bmur_0224 NC_014150.1 301447 302223 R PFAM: enoyl-CoA hydratase/isomerase; KEGG: bhy:BHWA1_00111 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase complement(301447..302223) Brachyspira murdochii DSM 12563 9141197 YP_003632530.1 CDS Bmur_0225 NC_014150.1 302860 304047 R KEGG: bhy:BHWA1_00110 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase complement(302860..304047) Brachyspira murdochii DSM 12563 9141198 YP_003632531.1 CDS Bmur_0226 NC_014150.1 304424 306250 D TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; KEGG: bhy:BHWA1_00109 D mismatch repair protein; SMART: MutL dimerisation; ATP-binding region ATPase domain protein; DNA mismatch repair protein MutL 304424..306250 Brachyspira murdochii DSM 12563 9141199 YP_003632532.1 CDS Bmur_0227 NC_014150.1 306666 307160 R KEGG: bhy:BHWA1_01149 hypothetical protein; hypothetical protein complement(306666..307160) Brachyspira murdochii DSM 12563 9141200 YP_003632533.1 CDS Bmur_0228 NC_014150.1 307284 308696 R KEGG: bhy:BHWA1_01148 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase complement(307284..308696) Brachyspira murdochii DSM 12563 9141201 YP_003632534.1 CDS Bmur_0229 NC_014150.1 309281 311428 D PFAM: ankyrin; KEGG: bhy:BHWA1_00072 ankyrin repeat-containing protein; ankyrin 309281..311428 Brachyspira murdochii DSM 12563 9141202 YP_003632535.1 CDS Bmur_0230 NC_014150.1 311480 312352 D KEGG: bhy:BHWA1_00126 hypothetical protein; hypothetical protein 311480..312352 Brachyspira murdochii DSM 12563 9141203 YP_003632536.1 CDS Bmur_0231 NC_014150.1 312572 313330 D KEGG: bhy:BHWA1_00105 uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-related protein 312572..313330 Brachyspira murdochii DSM 12563 9141204 YP_003632537.1 CDS Bmur_0232 NC_014150.1 313362 314165 D KEGG: bhy:BHWA1_00104 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 313362..314165 Brachyspira murdochii DSM 12563 9141205 YP_003632538.1 CDS Bmur_0233 NC_014150.1 314233 315069 D KEGG: bhy:BHWA1_00103 hypothetical protein; hypothetical protein 314233..315069 Brachyspira murdochii DSM 12563 9141206 YP_003632539.1 CDS Bmur_0234 NC_014150.1 315137 318421 D KEGG: bhy:BHWA1_00102 molybdate metabolism regulator; molybdate metabolism regulator 315137..318421 Brachyspira murdochii DSM 12563 9141207 YP_003632540.1 CDS Bmur_0235 NC_014150.1 318414 319724 D KEGG: bhy:BHWA1_00101 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; RNA polymerase sigma 54 subunit RpoN 318414..319724 Brachyspira murdochii DSM 12563 9141208 YP_003632541.1 CDS Bmur_0236 NC_014150.1 319740 320510 D KEGG: bhy:BHWA1_00100 hypothetical protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 319740..320510 Brachyspira murdochii DSM 12563 9141209 YP_003632542.1 CDS Bmur_0237 NC_014150.1 320552 321016 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_00099 PTS system, fructose subfamily, IIC subunit; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 320552..321016 Brachyspira murdochii DSM 12563 9141210 YP_003632543.1 CDS Bmur_0238 NC_014150.1 321016 321978 D PFAM: HPr serine kinase domain protein; KEGG: bhy:BHWA1_00098 HPr kinase/phosphatase; HPr kinase 321016..321978 Brachyspira murdochii DSM 12563 9141211 YP_003632544.1 CDS Bmur_0239 NC_014150.1 321986 322318 R KEGG: bhy:BHWA1_00097 septum formation initiator; septum formation initiator complement(321986..322318) Brachyspira murdochii DSM 12563 9141212 YP_003632545.1 CDS Bmur_0240 NC_014150.1 322355 323290 R KEGG: bhy:BHWA1_00096 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW complement(322355..323290) Brachyspira murdochii DSM 12563 9141213 YP_003632546.1 CDS Bmur_0241 NC_014150.1 323609 324139 D PFAM: protein of unknown function DUF308 membrane; KEGG: bhy:BHWA1_00095 hypothetical protein; hypothetical protein 323609..324139 Brachyspira murdochii DSM 12563 9141214 YP_003632547.1 CDS Bmur_0242 NC_014150.1 324207 324419 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_00094 nitrite reductase [NAD(P)H], large subunit; BFD domain-containing protein (2Fe-2S)-binding protein 324207..324419 Brachyspira murdochii DSM 12563 9141215 YP_003632548.1 CDS Bmur_0243 NC_014150.1 324412 324588 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_00093 Fer2 BFD, BFD-like [2Fe-2S] binding domain protein; BFD domain-containing protein (2Fe-2S)-binding protein 324412..324588 Brachyspira murdochii DSM 12563 9141216 YP_003632549.1 CDS Bmur_0244 NC_014150.1 324663 325580 R KEGG: bhy:BHWA1_00092 transketolase, pyridine binding subunit; PFAM: transketolase central region; transketolase domain protein; SMART: transketolase central region; transketolase complement(324663..325580) Brachyspira murdochii DSM 12563 9141217 YP_003632550.1 CDS Bmur_0245 NC_014150.1 325612 326409 R PFAM: transketolase domain protein; KEGG: bhy:BHWA1_00091 transketolase N-terminal subunit; transketolase complement(325612..326409) Brachyspira murdochii DSM 12563 9141218 YP_003632551.1 CDS Bmur_0246 NC_014150.1 326625 328559 R KEGG: bhy:BHWA1_00135 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(326625..328559) Brachyspira murdochii DSM 12563 9141219 YP_003632552.1 CDS Bmur_0247 NC_014150.1 328750 329133 R PFAM: Excinuclease ABC C subunit domain protein; KEGG: bhy:BHWA1_00090 endonuclease containing a URI domain; Excinuclease ABC C subunit domain protein complement(328750..329133) Brachyspira murdochii DSM 12563 9141220 YP_003632553.1 CDS Bmur_0248 NC_014150.1 329130 329804 R PFAM: acylneuraminate cytidylyltransferase; KEGG: bhy:BHWA1_00089 spore coat polysaccharide biosynthesis protein F; acylneuraminate cytidylyltransferase complement(329130..329804) Brachyspira murdochii DSM 12563 9141221 YP_003632554.1 CDS Bmur_0249 NC_014150.1 330078 330893 R TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; KEGG: bhy:BHWA1_00088 2-dehydro-3- deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; 2-dehydro-3-deoxyphosphooctonate aldolase complement(330078..330893) Brachyspira murdochii DSM 12563 9141222 YP_003632555.1 CDS Bmur_0250 NC_014150.1 331054 331617 D PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00087 acetyltransferase, GT family; N-acetyltransferase GCN5 331054..331617 Brachyspira murdochii DSM 12563 9141223 YP_003632556.1 CDS Bmur_0251 NC_014150.1 331791 334163 D PFAM: glycoside hydrolase 3 domain protein; KEGG: bhy:BHWA1_00085 glycoside hydrolase, family 3 domain protein; glycoside hydrolase 3 331791..334163 Brachyspira murdochii DSM 12563 9141224 YP_003632557.1 CDS Bmur_0252 NC_014150.1 334271 335269 R KEGG: bhy:BHWA1_00075 sucrose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(334271..335269) Brachyspira murdochii DSM 12563 9141225 YP_003632558.1 CDS Bmur_0253 NC_014150.1 335661 337085 D KEGG: bhy:BHWA1_00076 PTS system, IIABC component; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-like transporter subunit IIB 335661..337085 Brachyspira murdochii DSM 12563 9141226 YP_003632559.1 CDS Bmur_0254 NC_014150.1 337229 338719 D TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: glycosyl hydrolase 32 domain protein; KEGG: bhy:BHWA1_00077 beta-fructosidase (levanase/invertase); SMART: glycoside hydrolase 32; sucrose-6-phosphate hydrolase 337229..338719 Brachyspira murdochii DSM 12563 9141227 YP_003632560.1 CDS Bmur_0255 NC_014150.1 338792 339256 D KEGG: bhy:BHWA1_00078 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; transcription elongation factor GreA 338792..339256 Brachyspira murdochii DSM 12563 9141228 YP_003632561.1 CDS Bmur_0256 NC_014150.1 339435 340928 D TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: bhy:BHWA1_00079 glycogen synthase; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; glycogen/starch synthase 339435..340928 Brachyspira murdochii DSM 12563 9141229 YP_003632562.1 CDS Bmur_0257 NC_014150.1 340961 341485 D PFAM: ThiJ/PfpI domain protein; KEGG: bhy:BHWA1_00080 intracellular protease; ThiJ/PfpI domain-containing protein 340961..341485 Brachyspira murdochii DSM 12563 9141230 YP_003632563.1 CDS Bmur_0258 NC_014150.1 341682 342479 D KEGG: bhy:BHWA1_00081 hydrolase 3, haloacid dehalogenase-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 341682..342479 Brachyspira murdochii DSM 12563 9141231 YP_003632564.1 CDS Bmur_0259 NC_014150.1 342498 343283 D KEGG: bhy:BHWA1_00082 hydrolase 3, haloacid dehalogenase-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 342498..343283 Brachyspira murdochii DSM 12563 9141232 YP_003632565.1 CDS Bmur_0260 NC_014150.1 343362 344648 D TIGRFAM: glucose-1-phosphate adenylyltransferase; KEGG: bhy:BHWA1_00083 glucose-1-phosphate adenylyltransferase; PFAM: nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 343362..344648 Brachyspira murdochii DSM 12563 9141233 YP_003632566.1 CDS Bmur_0261 NC_014150.1 344753 345763 D KEGG: bhy:BHWA1_00533 ribosomal large subunit pseudouridine synthase C; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 344753..345763 Brachyspira murdochii DSM 12563 9141234 YP_003632567.1 CDS Bmur_0262 NC_014150.1 345896 346327 D KEGG: bhy:BHWA1_00532 periplasmic protein; hypothetical protein 345896..346327 Brachyspira murdochii DSM 12563 9141235 YP_003632568.1 CDS Bmur_0263 NC_014150.1 346456 347691 R PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_00838 GltP, Na+/H+-dicarboxylate symporter; sodium:dicarboxylate symporter complement(346456..347691) Brachyspira murdochii DSM 12563 9141236 YP_003632569.1 CDS Bmur_0264 NC_014150.1 347709 348908 R PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00840 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; class I and II aminotransferase complement(347709..348908) Brachyspira murdochii DSM 12563 9141237 YP_003632570.1 CDS Bmur_0265 NC_014150.1 349093 349761 D PFAM: YheO domain protein; KEGG: hin:HI0575 hypothetical protein; hypothetical protein 349093..349761 Brachyspira murdochii DSM 12563 9141238 YP_003632571.1 CDS Bmur_0266 NC_014150.1 349963 350724 R KEGG: bhy:BHWA1_02621 hypothetical protein; hypothetical protein complement(349963..350724) Brachyspira murdochii DSM 12563 9141239 YP_003632572.1 CDS Bmur_0267 NC_014150.1 350796 352412 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_00181 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein complement(350796..352412) Brachyspira murdochii DSM 12563 9141240 YP_003632573.1 CDS Bmur_0268 NC_014150.1 352491 352793 R PFAM: DNA polymerase beta domain protein region; KEGG: bhy:BHWA1_00438 restriction modification system DNA specificity domain protein; DNA polymerase beta domain-containing protein region complement(352491..352793) Brachyspira murdochii DSM 12563 9141241 YP_003632574.1 CDS Bmur_0269 NC_014150.1 352790 353233 R KEGG: bhy:BHWA1_00437 nucleotidyltransferase substrate binding protein; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: nucleotidyltransferase substrate binding protein HI0074; nucleotidyltransferase substrate binding protein complement(352790..353233) Brachyspira murdochii DSM 12563 9141242 YP_003632575.1 CDS Bmur_0270 NC_014150.1 353280 354470 R KEGG: bhy:BHWA1_00180 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase complement(353280..354470) Brachyspira murdochii DSM 12563 9141243 YP_003632576.1 CDS Bmur_0271 NC_014150.1 354842 356083 R PFAM: peptidase M30, hyicolysin; KEGG: bhy:BHWA1_01703 hypothetical protein; peptidase M30, hyicolysin complement(354842..356083) Brachyspira murdochii DSM 12563 9141244 YP_003632577.1 CDS Bmur_0272 NC_014150.1 356411 357184 D PFAM: SCP-like extracellular; KEGG: bhy:BHWA1_00178 spore coat assembly protein; hypothetical protein 356411..357184 Brachyspira murdochii DSM 12563 9141245 YP_003632578.1 CDS Bmur_0273 NC_014150.1 357209 357619 D PFAM: biopolymer transporter ExbD/TolR; KEGG: bhy:BHWA1_00177 biopolymer transport protein ExbD/TolR; biopolymer transporter ExbD/TolR 357209..357619 Brachyspira murdochii DSM 12563 9141246 YP_003632579.1 CDS Bmur_0274 NC_014150.1 357626 358681 R KEGG: bhy:BHWA1_02691 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase complement(357626..358681) Brachyspira murdochii DSM 12563 9141247 YP_003632580.1 CDS Bmur_0275 NC_014150.1 358719 360674 R KEGG: bhy:BHWA1_00176 ABC transporter, transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter complement(358719..360674) Brachyspira murdochii DSM 12563 9141248 YP_003632581.1 CDS Bmur_0276 NC_014150.1 360719 361399 R KEGG: bhy:BHWA1_00175 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(360719..361399) Brachyspira murdochii DSM 12563 9141249 YP_003632582.1 CDS Bmur_0277 NC_014150.1 361392 362687 R PFAM: protein of unknown function DUF214; KEGG: bhy:BHWA1_00174 lipoprotein releasing system, hypothetical protein, LolC/E family; hypothetical protein complement(361392..362687) Brachyspira murdochii DSM 12563 9141250 YP_003632583.1 CDS Bmur_0278 NC_014150.1 363072 363260 D KEGG: hypothetical protein; hypothetical protein 363072..363260 Brachyspira murdochii DSM 12563 9141251 YP_003632584.1 CDS Bmur_0279 NC_014150.1 363522 363920 R PFAM: phosphoribosyltransferase; KEGG: bhy:BHWA1_00123 purine phosphoribosyltransferase; phosphoribosyltransferase complement(363522..363920) Brachyspira murdochii DSM 12563 9141252 YP_003632585.1 CDS Bmur_0280 NC_014150.1 363939 366362 R TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: bhy:BHWA1_00122 phenylalanyl-tRNA synthetase alpha chain; phenylalanyl-tRNA synthetase subunit beta complement(363939..366362) Brachyspira murdochii DSM 12563 9141253 YP_003632586.1 CDS Bmur_0281 NC_014150.1 366430 367449 R TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; KEGG: bhy:BHWA1_00121 phenylalanyl-tRNA synthetase alpha chain; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha complement(366430..367449) Brachyspira murdochii DSM 12563 9141254 YP_003632587.1 CDS Bmur_0282 NC_014150.1 368219 369241 D TIGRFAM: metalloendopeptidase, glycoprotease; KEGG: bhy:BHWA1_00427 O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; metalloendopeptidase, glycoprotease 368219..369241 Brachyspira murdochii DSM 12563 9141255 YP_003632588.1 CDS Bmur_0283 NC_014150.1 369339 370823 R KEGG: bhy:BHWA1_00277 hypothetical protein; hypothetical protein complement(369339..370823) Brachyspira murdochii DSM 12563 9141256 YP_003632589.1 CDS Bmur_0284 NC_014150.1 370986 371972 R KEGG: bhy:BHWA1_00276 hypothetical protein; hypothetical protein complement(370986..371972) Brachyspira murdochii DSM 12563 9141257 YP_003632590.1 CDS Bmur_0285 NC_014150.1 372022 373794 R KEGG: bhy:BHWA1_00275 serine phosphotase RsbU sigma factor regulatory protein; PFAM: Stage II sporulation E family protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; protein serine phosphatase with GAF(s) sensor(s) complement(372022..373794) Brachyspira murdochii DSM 12563 9141258 YP_003632591.1 CDS Bmur_0286 NC_014150.1 374003 374977 D PFAM: dihydrouridine synthase DuS; KEGG: bhy:BHWA1_00274 dihydrouridine synthase-like (DUS-like) FMN-binding domain protein; dihydrouridine synthase DuS 374003..374977 Brachyspira murdochii DSM 12563 9141259 YP_003632592.1 CDS Bmur_0287 NC_014150.1 375042 376157 R KEGG: cpf:CPF_2654 maltose/maltodextrin ABC transporter, ATP-binding protein; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter complement(375042..376157) Brachyspira murdochii DSM 12563 9141260 YP_003632593.1 CDS Bmur_0288 NC_014150.1 376227 377237 R PFAM: phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: bhy:BHWA1_00273 phosphoenolpyruvate-dependent sugar phosphotransferase system; phosphotransferase system EIIB/cysteine, phosphorylation site complement(376227..377237) Brachyspira murdochii DSM 12563 9141261 YP_003632594.1 CDS Bmur_0289 NC_014150.1 377367 378827 R KEGG: bhy:BHWA1_00272 pts system, N- acetylglucosamine-specific IIBC component; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system N-acetylglucosamine-specific transporter subunit IIBC complement(377367..378827) Brachyspira murdochii DSM 12563 9141262 YP_003632595.1 CDS Bmur_0291 NC_014150.1 379675 381009 R KEGG: bhy:BHWA1_00270 response regulatory protein (AtoC); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis- type; SMART: response regulator receiver; AAA ATPase; Fis family transcriptional regulator complement(379675..381009) Brachyspira murdochii DSM 12563 9141264 YP_003632596.1 CDS Bmur_0292 NC_014150.1 381002 382183 R KEGG: bhy:BHWA1_00269 sensory box histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(381002..382183) Brachyspira murdochii DSM 12563 9141265 YP_003632597.1 CDS Bmur_0293 NC_014150.1 382711 383754 R KEGG: bhy:BHWA1_00578 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(382711..383754) Brachyspira murdochii DSM 12563 9141266 YP_003632598.1 CDS Bmur_0294 NC_014150.1 383851 383946 R KEGG: bhy:BHWA1_00578 3-deoxy-7-phosphoheptulonate synthase; hypothetical protein complement(383851..383946) Brachyspira murdochii DSM 12563 9141267 YP_003632599.1 CDS Bmur_0295 NC_014150.1 384252 384950 R KEGG: bhy:BHWA1_00579 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase 1; purine nucleoside phosphorylase complement(384252..384950) Brachyspira murdochii DSM 12563 9141268 YP_003632600.1 CDS Bmur_0296 NC_014150.1 385085 385642 D KEGG: bhy:BHWA1_00547 hypothetical GTP-binding protein; GTP-binding protein 385085..385642 Brachyspira murdochii DSM 12563 9141269 YP_003632601.1 CDS Bmur_0297 NC_014150.1 385646 387907 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; Hemerythrin HHE cation binding domain protein; KEGG: bhy:BHWA1_00548 methyl-accepting chemotaxis protein McpB; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(385646..387907) Brachyspira murdochii DSM 12563 9141270 YP_003632602.1 CDS Bmur_0298 NC_014150.1 388099 390348 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: bhy:BHWA1_00549 methyl-accepting chemotaxis protein McpB; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(388099..390348) Brachyspira murdochii DSM 12563 9141271 YP_003632603.1 CDS Bmur_0299 NC_014150.1 390534 391727 D KEGG: bhy:BHWA1_00597 hypothetical protein; hypothetical protein 390534..391727 Brachyspira murdochii DSM 12563 9141272 YP_003632604.1 CDS Bmur_0300 NC_014150.1 391786 392703 D KEGG: bhy:BHWA1_00853 hypothetical protein; hypothetical protein 391786..392703 Brachyspira murdochii DSM 12563 9141273 YP_003632605.1 CDS Bmur_0301 NC_014150.1 392850 393959 D KEGG: bhy:BHWA1_00591 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 392850..393959 Brachyspira murdochii DSM 12563 9141274 YP_003632606.1 CDS Bmur_0302 NC_014150.1 394313 394822 R KEGG: bhy:BHWA1_01574 hypothetical protein; hypothetical protein complement(394313..394822) Brachyspira murdochii DSM 12563 9141275 YP_003632607.1 CDS Bmur_0303 NC_014150.1 394989 395345 R KEGG: bhy:BHWA1_00763 FMN-binding domain protein; FMN-binding domain-containing protein complement(394989..395345) Brachyspira murdochii DSM 12563 9141276 YP_003632608.1 CDS Bmur_0304 NC_014150.1 395416 395844 R KEGG: bhy:BHWA1_00764 hypothetical protein; hypothetical protein complement(395416..395844) Brachyspira murdochii DSM 12563 9141277 YP_003632609.1 CDS Bmur_0305 NC_014150.1 395993 397597 D KEGG: bhy:BHWA1_00765 hypothetical protein; hypothetical protein 395993..397597 Brachyspira murdochii DSM 12563 9141278 YP_003632610.1 CDS Bmur_0306 NC_014150.1 397837 399744 D KEGG: bhy:BHWA1_00766 predicted hydrolase of the metallo-beta-lactamase superfamily; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase 397837..399744 Brachyspira murdochii DSM 12563 9141279 YP_003632611.1 CDS Bmur_0307 NC_014150.1 399762 400736 D KEGG: bhy:BHWA1_00767 SppA, periplasmic serine proteases (ClpP class); TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 399762..400736 Brachyspira murdochii DSM 12563 9141280 YP_003632612.1 CDS Bmur_0308 NC_014150.1 400736 401302 D KEGG: bhy:BHWA1_00768 hypothetical protein; hypothetical protein 400736..401302 Brachyspira murdochii DSM 12563 9141281 YP_003632613.1 CDS Bmur_0309 NC_014150.1 401304 402557 D PFAM: permease YjgP/YjgQ family protein; KEGG: bhy:BHWA1_00769 permease YjgP/YjgQ; YjgP/YjgQ family permease 401304..402557 Brachyspira murdochii DSM 12563 9141282 YP_003632614.1 CDS Bmur_0310 NC_014150.1 402561 403274 D KEGG: bhy:BHWA1_00553 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase 402561..403274 Brachyspira murdochii DSM 12563 9141283 YP_003632615.1 CDS Bmur_0311 NC_014150.1 403391 403753 D KEGG: bhy:BHWA1_00554 hypothetical protein; hypothetical protein 403391..403753 Brachyspira murdochii DSM 12563 9141284 YP_003632616.1 CDS Bmur_0312 NC_014150.1 403769 404530 D KEGG: bhy:BHWA1_00555 hypothetical protein; hypothetical protein 403769..404530 Brachyspira murdochii DSM 12563 9141285 YP_003632617.1 CDS Bmur_0313 NC_014150.1 404534 404983 R KEGG: bhy:BHWA1_00709 hypothetical protein; hypothetical protein complement(404534..404983) Brachyspira murdochii DSM 12563 9141286 YP_003632618.1 CDS Bmur_0314 NC_014150.1 404987 406393 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00710 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(404987..406393) Brachyspira murdochii DSM 12563 9141287 YP_003632619.1 CDS Bmur_0315 NC_014150.1 406393 407433 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00711 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(406393..407433) Brachyspira murdochii DSM 12563 9141288 YP_003632620.1 CDS Bmur_0316 NC_014150.1 407526 408515 R KEGG: bhy:BHWA1_00243 hypothetical protein; Crp/Fnr family transcriptional regulator complement(407526..408515) Brachyspira murdochii DSM 12563 9141289 YP_003632621.1 CDS Bmur_0317 NC_014150.1 408841 409332 R KEGG: bhy:BHWA1_00712 ribonuclease H; PFAM: ribonuclease H; ribonuclease H complement(408841..409332) Brachyspira murdochii DSM 12563 9141290 YP_003632622.1 CDS Bmur_0318 NC_014150.1 409357 410391 R PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bhy:BHWA1_00713 phosphoesterase, RecJ domain protein; phosphoesterase RecJ complement(409357..410391) Brachyspira murdochii DSM 12563 9141291 YP_003632623.1 CDS Bmur_0319 NC_014150.1 410420 410788 R KEGG: bhy:BHWA1_00714 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A complement(410420..410788) Brachyspira murdochii DSM 12563 9141292 YP_003632624.1 CDS Bmur_0320 NC_014150.1 410794 411276 R KEGG: bhy:BHWA1_00715 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein; chemotaxis protein CheW complement(410794..411276) Brachyspira murdochii DSM 12563 9141293 YP_003632625.1 CDS Bmur_0321 NC_014150.1 411424 412725 R PFAM: protein of unknown function DUF1063; KEGG: cbb:CLD_2825 hypothetical protein; hypothetical protein complement(411424..412725) Brachyspira murdochii DSM 12563 9141294 YP_003632626.1 CDS Bmur_0322 NC_014150.1 412822 413274 R KEGG: bhy:BHWA1_00523 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C complement(412822..413274) Brachyspira murdochii DSM 12563 9141295 YP_003632627.1 CDS Bmur_0323 NC_014150.1 413296 414093 R KEGG: bhy:BHWA1_00524 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(413296..414093) Brachyspira murdochii DSM 12563 9141296 YP_003632628.1 CDS Bmur_0324 NC_014150.1 414077 415288 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bhy:BHWA1_00525 molybdenum cofactor synthesis domain protein; SMART: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein complement(414077..415288) Brachyspira murdochii DSM 12563 9141297 YP_003632629.1 CDS Bmur_0325 NC_014150.1 415327 416187 R KEGG: bhy:BHWA1_00526 dehydrogenase accessory protein; dehydrogenase accessory protein complement(415327..416187) Brachyspira murdochii DSM 12563 9141298 YP_003632630.1 CDS Bmur_0326 NC_014150.1 416354 416803 D PFAM: MOSC domain containing protein; KEGG: bhy:BHWA1_00527 MOSC domain containing protein; MOSC domain-containing protein 416354..416803 Brachyspira murdochii DSM 12563 9141299 YP_003632631.1 CDS Bmur_0327 NC_014150.1 416775 417251 D KEGG: bhy:BHWA1_00528 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein 416775..417251 Brachyspira murdochii DSM 12563 9141300 YP_003632632.1 CDS Bmur_0328 NC_014150.1 417280 418062 D KEGG: bhy:BHWA1_00529 ModA, ABC-type molybdate transport system, periplasmic component; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 417280..418062 Brachyspira murdochii DSM 12563 9141301 YP_003632633.1 CDS Bmur_0329 NC_014150.1 418075 418755 D KEGG: bhy:BHWA1_00530 ModC, ABC-type molybdate transport system, permease component; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit 418075..418755 Brachyspira murdochii DSM 12563 9141302 YP_003632634.1 CDS Bmur_0330 NC_014150.1 418752 419801 D KEGG: bhy:BHWA1_00531 predicted transport protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 418752..419801 Brachyspira murdochii DSM 12563 9141303 YP_003632635.1 CDS Bmur_0331 NC_014150.1 419865 421304 R KEGG: bhy:BHWA1_00074 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; dihydropyrimidinase complement(419865..421304) Brachyspira murdochii DSM 12563 9141304 YP_003632636.1 CDS Bmur_0332 NC_014150.1 421452 421679 R KEGG: hypothetical protein; hypothetical protein complement(421452..421679) Brachyspira murdochii DSM 12563 9141305 YP_003632637.1 CDS Bmur_0333 NC_014150.1 422918 424498 R PFAM: amidohydrolase; KEGG: bhy:BHWA1_00195 amidohydrolase 3; amidohydrolase complement(422918..424498) Brachyspira murdochii DSM 12563 9141306 YP_003632638.1 CDS Bmur_0334 NC_014150.1 424529 426349 R KEGG: bhy:BHWA1_00194 hypothetical ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(424529..426349) Brachyspira murdochii DSM 12563 9141307 YP_003632639.1 CDS Bmur_0335 NC_014150.1 426451 427866 R KEGG: bhy:BHWA1_00193 UDP-N-acetylmuramoylalanine-- D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(426451..427866) Brachyspira murdochii DSM 12563 9141308 YP_003632640.1 CDS Bmur_0337 NC_014150.1 428851 429318 R KEGG: hypothetical protein; hypothetical protein complement(428851..429318) Brachyspira murdochii DSM 12563 9141310 YP_003632641.1 CDS Bmur_0338 NC_014150.1 429432 429848 R KEGG: bhy:BHWA1_00191 hypothetical protein; hypothetical protein complement(429432..429848) Brachyspira murdochii DSM 12563 9141311 YP_003632642.1 CDS Bmur_0339 NC_014150.1 429941 430822 R KEGG: bhy:BHWA1_00190 cation efflux system protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(429941..430822) Brachyspira murdochii DSM 12563 9141312 YP_003632643.1 CDS Bmur_0340 NC_014150.1 431081 431995 D KEGG: bhy:BHWA1_00189 malonyl-CoA-[acyl-carrier- protein] transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-ACP transacylase 431081..431995 Brachyspira murdochii DSM 12563 9141313 YP_003632644.1 CDS Bmur_0341 NC_014150.1 432144 432707 R TIGRFAM: peroxiredoxin; KEGG: bhy:BHWA1_00188 alkyl hydrogen peroxide reductase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; peroxiredoxin complement(432144..432707) Brachyspira murdochii DSM 12563 9141314 YP_003632645.1 CDS Bmur_0342 NC_014150.1 432942 433511 D KEGG: bhy:BHWA1_00328 HDIG domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 432942..433511 Brachyspira murdochii DSM 12563 9141315 YP_003632646.1 CDS Bmur_0343 NC_014150.1 433765 434880 D KEGG: bhy:BHWA1_00327 GTP-binding protein HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; GTP-binding protein HflX 433765..434880 Brachyspira murdochii DSM 12563 9141316 YP_003632647.1 CDS Bmur_0344 NC_014150.1 434885 435343 R PFAM: SCP-like extracellular; KEGG: bhy:BHWA1_00326 SCP-like extracellular protein; hypothetical protein complement(434885..435343) Brachyspira murdochii DSM 12563 9141317 YP_003632648.1 CDS Bmur_0345 NC_014150.1 435417 437138 R KEGG: bhy:BHWA1_00325 site-specific DNA- methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; adenine-specific DNA-methyltransferase complement(435417..437138) Brachyspira murdochii DSM 12563 9141318 YP_003632649.1 CDS Bmur_0346 NC_014150.1 437317 439137 D KEGG: bhy:BHWA1_00522 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 437317..439137 Brachyspira murdochii DSM 12563 9141319 YP_003632650.1 CDS Bmur_0347 NC_014150.1 439190 440554 R KEGG: bhy:BHWA1_00650 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(439190..440554) Brachyspira murdochii DSM 12563 9141320 YP_003632651.1 CDS Bmur_0348 NC_014150.1 440719 441726 R KEGG: bhy:BHWA1_00264 aldose 1-epimerase; PFAM: Aldose 1-epimerase; aldose 1-epimerase complement(440719..441726) Brachyspira murdochii DSM 12563 9141321 YP_003632652.1 CDS Bmur_0349 NC_014150.1 442056 442451 R PFAM: protein of unknown function UPF0047; KEGG: bhy:BHWA1_00265 hypothetical protein; hypothetical protein complement(442056..442451) Brachyspira murdochii DSM 12563 9141322 YP_003632653.1 CDS Bmur_0350 NC_014150.1 442527 443039 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: bhy:BHWA1_00266 nitroimidazole resistance protein; pyridoxamine 5'-phosphate oxidase-related FMN- binding protein 442527..443039 Brachyspira murdochii DSM 12563 9141323 YP_003632654.1 CDS Bmur_0351 NC_014150.1 443040 444428 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bhy:BHWA1_00267 peptidase; peptidase U62 443040..444428 Brachyspira murdochii DSM 12563 9141324 YP_003632655.1 CDS Bmur_0352 NC_014150.1 444432 445790 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bhy:BHWA1_00268 peptidase; peptidase U62 444432..445790 Brachyspira murdochii DSM 12563 9141325 YP_003632656.1 CDS Bmur_0353 NC_014150.1 446359 447612 R KEGG: bhy:BHWA1_00772 tryptophan synthase beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta complement(446359..447612) Brachyspira murdochii DSM 12563 9141326 YP_003632657.1 CDS Bmur_0354 NC_014150.1 447784 449838 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_00771 TPR domain-containing protein; hypothetical protein 447784..449838 Brachyspira murdochii DSM 12563 9141327 YP_003632658.1 CDS Bmur_0355 NC_014150.1 449894 450391 D KEGG: bhy:BHWA1_00770 hypothetical protein; hypothetical protein 449894..450391 Brachyspira murdochii DSM 12563 9141328 YP_003632659.1 CDS Bmur_0356 NC_014150.1 450410 450841 D PFAM: flavodoxin/nitric oxide synthase; KEGG: bhy:BHWA1_02556 flavodoxin; flavodoxin/nitric oxide synthase 450410..450841 Brachyspira murdochii DSM 12563 9141329 YP_003632660.1 CDS Bmur_0357 NC_014150.1 450954 453056 R PFAM: NHL repeat containing protein; KEGG: bhy:BHWA1_00661 NHL repeat containing protein; NHL repeat containing protein complement(450954..453056) Brachyspira murdochii DSM 12563 9141330 YP_003632661.1 CDS Bmur_0358 NC_014150.1 453240 453983 R PFAM: lytic transglycosylase catalytic; KEGG: bhy:BHWA1_00664 lytic transglycosylase; lytic transglycosylase complement(453240..453983) Brachyspira murdochii DSM 12563 9141332 YP_003632662.1 CDS Bmur_0359 NC_014150.1 453995 454447 R TIGRFAM: flagellar export protein FliJ; KEGG: bhy:BHWA1_00665 hypothetical protein; flagellar export protein FliJ complement(453995..454447) Brachyspira murdochii DSM 12563 9141333 YP_003632663.1 CDS Bmur_0360 NC_014150.1 454479 455936 R SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family; KEGG: bhy:BHWA1_00666 flagellar biosynthesis/type III secretory pathway ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; FliI/YscN family ATPase complement(454479..455936) Brachyspira murdochii DSM 12563 9141334 YP_003632664.1 CDS Bmur_0361 NC_014150.1 455974 456876 R PFAM: Flagellar assembly protein FliH/type III secretion system HrpE; KEGG: bhy:BHWA1_00667 flagellar assembly protein H; flagellar assembly protein FliH complement(455974..456876) Brachyspira murdochii DSM 12563 9141335 YP_003632665.1 CDS Bmur_0362 NC_014150.1 456921 457952 R KEGG: bhy:BHWA1_00668 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(456921..457952) Brachyspira murdochii DSM 12563 9141336 YP_003632666.1 CDS Bmur_0363 NC_014150.1 458011 459714 R KEGG: bhy:BHWA1_00669 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: Flagellar M-ring domain protein; secretory protein YscJ/FliF family protein; flagellar M-ring protein FliF complement(458011..459714) Brachyspira murdochii DSM 12563 9141337 YP_003632667.1 CDS Bmur_0364 NC_014150.1 459945 460424 R PFAM: CinA domain protein; KEGG: bhy:BHWA1_00670 competence-damaged protein CinA; CinA domain-containing protein complement(459945..460424) Brachyspira murdochii DSM 12563 9141338 YP_003632668.1 CDS Bmur_0365 NC_014150.1 461020 461811 R PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_00589 hypothetical protein; hypothetical protein complement(461020..461811) Brachyspira murdochii DSM 12563 9141339 YP_003632669.1 CDS Bmur_0366 NC_014150.1 461836 462831 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_00329 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(461836..462831) Brachyspira murdochii DSM 12563 9141340 YP_003632670.1 CDS Bmur_0367 NC_014150.1 462962 463171 D KEGG: cation channel family protein; hypothetical protein 462962..463171 Brachyspira murdochii DSM 12563 9141341 YP_003632671.1 CDS Bmur_0368 NC_014150.1 463194 464642 D KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein 463194..464642 Brachyspira murdochii DSM 12563 9141342 YP_003632672.1 CDS Bmur_0369 NC_014150.1 464635 465594 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_00330 oligopeptide/dipeptide ABC transporter, ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(464635..465594) Brachyspira murdochii DSM 12563 9141343 YP_003632673.1 CDS Bmur_0370 NC_014150.1 465692 466141 R PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00331 acetyltransferase, GT family; N-acetyltransferase GCN5 complement(465692..466141) Brachyspira murdochii DSM 12563 9141344 YP_003632674.1 CDS Bmur_0371 NC_014150.1 466158 466517 R KEGG: bhy:BHWA1_00332 hypothetical protein; hypothetical protein complement(466158..466517) Brachyspira murdochii DSM 12563 9141345 YP_003632675.1 CDS Bmur_0372 NC_014150.1 466658 467401 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bhy:BHWA1_00333 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 466658..467401 Brachyspira murdochii DSM 12563 9141346 YP_003632676.1 CDS Bmur_0373 NC_014150.1 467468 468448 D KEGG: bhy:BHWA1_00334 hypothetical hypothetical protein; hypothetical protein 467468..468448 Brachyspira murdochii DSM 12563 9141347 YP_003632677.1 CDS Bmur_0374 NC_014150.1 468503 468952 D PFAM: protein of unknown function UPF0079; KEGG: bhy:BHWA1_00335 nucleotide-binding protein; hypothetical protein 468503..468952 Brachyspira murdochii DSM 12563 9141348 YP_003632678.1 CDS Bmur_0375 NC_014150.1 468949 469980 D KEGG: bhy:BHWA1_00336 hypothetical protein; hypothetical protein 468949..469980 Brachyspira murdochii DSM 12563 9141349 YP_003632679.1 CDS Bmur_0376 NC_014150.1 469996 471390 D KEGG: bhy:BHWA1_00337 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP- binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE 469996..471390 Brachyspira murdochii DSM 12563 9141350 YP_003632680.1 CDS Bmur_0377 NC_014150.1 471522 472247 D KEGG: bhy:BHWA1_00338 hypothetical protein; hypothetical protein 471522..472247 Brachyspira murdochii DSM 12563 9141351 YP_003632681.1 CDS Bmur_0378 NC_014150.1 472275 473471 R PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_02646 cAMP-binding protein; Crp/Fnr family transcriptional regulator complement(472275..473471) Brachyspira murdochii DSM 12563 9141352 YP_003632682.1 CDS Bmur_0379 NC_014150.1 473602 474894 R KEGG: bhy:BHWA1_00426 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; adenylosuccinate lyase complement(473602..474894) Brachyspira murdochii DSM 12563 9141353 YP_003632683.1 CDS Bmur_0380 NC_014150.1 475065 476081 D KEGG: bhy:BHWA1_00425 L-allo-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 475065..476081 Brachyspira murdochii DSM 12563 9141354 YP_003632684.1 CDS Bmur_0382 NC_014150.1 478095 478991 R PFAM: methyltransferase type 11; KEGG: bhy:BHWA1_00423 methyltransferase; methyltransferase type 11 complement(478095..478991) Brachyspira murdochii DSM 12563 9141356 YP_003632685.1 CDS Bmur_0383 NC_014150.1 479014 480510 R KEGG: bhy:BHWA1_00422 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; NusA antitermination factor complement(479014..480510) Brachyspira murdochii DSM 12563 9141357 YP_003632686.1 CDS Bmur_0384 NC_014150.1 480553 481119 R KEGG: bhy:BHWA1_00421 hypothetical protein; hypothetical protein complement(480553..481119) Brachyspira murdochii DSM 12563 9141358 YP_003632687.1 CDS Bmur_0385 NC_014150.1 481363 482889 D KEGG: bhy:BHWA1_00420 cardiolipin synthase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; phospholipase D 481363..482889 Brachyspira murdochii DSM 12563 9141359 YP_003632688.1 CDS Bmur_0386 NC_014150.1 482918 483862 D KEGG: bhy:BHWA1_00419 hypothetical protein; hypothetical protein 482918..483862 Brachyspira murdochii DSM 12563 9141360 YP_003632689.1 CDS Bmur_0387 NC_014150.1 483952 485805 R KEGG: bhy:BHWA1_00417 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(483952..485805) Brachyspira murdochii DSM 12563 9141361 YP_003632690.1 CDS Bmur_0388 NC_014150.1 486047 487330 D KEGG: bhy:BHWA1_00416 galactokinase; PFAM: GHMP kinase; Galactokinase galactose-binding domain; galactokinase 486047..487330 Brachyspira murdochii DSM 12563 9141362 YP_003632691.1 CDS Bmur_0389 NC_014150.1 487464 489200 R PFAM: protein of unknown function DUF342; KEGG: bhy:BHWA1_00414 predicted polymerase; hypothetical protein complement(487464..489200) Brachyspira murdochii DSM 12563 9141363 YP_003632692.1 CDS Bmur_0390 NC_014150.1 489234 490037 R PFAM: methyltransferase type 11; KEGG: bhy:BHWA1_00413 methyltransferase; methyltransferase type 11 complement(489234..490037) Brachyspira murdochii DSM 12563 9141364 YP_003632693.1 CDS Bmur_0391 NC_014150.1 490103 490846 R PFAM: PASTA domain containing protein; KEGG: bhy:BHWA1_00412 PASTA domain containing protein; PASTA domain-containing protein complement(490103..490846) Brachyspira murdochii DSM 12563 9141365 YP_003632694.1 CDS Bmur_0392 NC_014150.1 490868 491806 R PFAM: formyl transferase domain protein; KEGG: bhy:BHWA1_00411 methionyl-tRNA formyltransferase; formyl transferase domain-containing protein complement(490868..491806) Brachyspira murdochii DSM 12563 9141366 YP_003632695.1 CDS Bmur_0393 NC_014150.1 491868 493316 R KEGG: bhy:BHWA1_00410 hypothetical protein; hypothetical protein complement(491868..493316) Brachyspira murdochii DSM 12563 9141367 YP_003632696.1 CDS Bmur_0394 NC_014150.1 493342 493959 R KEGG: bhy:BHWA1_00409 hypothetical protein; hypothetical protein complement(493342..493959) Brachyspira murdochii DSM 12563 9141368 YP_003632697.1 CDS Bmur_0395 NC_014150.1 494033 495955 R SMART: ankyrin; KEGG: bhy:BHWA1_00408 ankyrin repeat-containing protein; ankyrin complement(494033..495955) Brachyspira murdochii DSM 12563 9141369 YP_003632698.1 CDS Bmur_0396 NC_014150.1 496051 498657 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_00407 solute binding protein-like protein; ABC transporter substrate-binding protein complement(496051..498657) Brachyspira murdochii DSM 12563 9141370 YP_003632699.1 CDS Bmur_0397 NC_014150.1 498843 499796 R KEGG: bhy:BHWA1_00994 hypothetical protein; hypothetical protein complement(498843..499796) Brachyspira murdochii DSM 12563 9141371 YP_003632700.1 CDS Bmur_0398 NC_014150.1 499967 500461 R KEGG: bhy:BHWA1_00312 hypothetical protein; hypothetical protein complement(499967..500461) Brachyspira murdochii DSM 12563 9141372 YP_003632701.1 CDS Bmur_0399 NC_014150.1 500474 501874 R KEGG: bhy:BHWA1_00313 hypothetical protein; hypothetical protein complement(500474..501874) Brachyspira murdochii DSM 12563 9141373 YP_003632702.1 CDS Bmur_0400 NC_014150.1 502026 502697 D PFAM: YheO domain protein; KEGG: bhy:BHWA1_00314 hypothetical protein; hypothetical protein 502026..502697 Brachyspira murdochii DSM 12563 9141374 YP_003632703.1 CDS Bmur_0401 NC_014150.1 502843 503775 R PFAM: integrase; integrase domain protein SAM domain protein; KEGG: bhy:BHWA1_00315 tyrosine recombinase XerD; integrase complement(502843..503775) Brachyspira murdochii DSM 12563 9141375 YP_003632704.1 CDS Bmur_0402 NC_014150.1 504016 505104 D KEGG: bhy:BHWA1_00316 hypothetical protein; hypothetical protein 504016..505104 Brachyspira murdochii DSM 12563 9141376 YP_003632705.1 CDS Bmur_0403 NC_014150.1 505259 506029 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00318 taurine ABC transporter permease; binding-protein-dependent transport system inner membrane protein 505259..506029 Brachyspira murdochii DSM 12563 9141377 YP_003632706.1 CDS Bmur_0404 NC_014150.1 506056 506841 D KEGG: bhy:BHWA1_00319 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 506056..506841 Brachyspira murdochii DSM 12563 9141378 YP_003632707.1 CDS Bmur_0405 NC_014150.1 506904 507899 D KEGG: bhy:BHWA1_00321 ABC-type nitrate/sulfonate/bicarbonate transport system; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; aliphatic sulfonates ABC transporter periplasmic protein 506904..507899 Brachyspira murdochii DSM 12563 9141379 YP_003632708.1 CDS Bmur_0406 NC_014150.1 508054 509058 D PFAM: NMT1/THI5 like domain protein; KEGG: bhy:BHWA1_00322 ABC-type nitrate/sulfonate/bicarbonate transport system; nitrate/sulfonate/bicarbonate ABC transporter 508054..509058 Brachyspira murdochii DSM 12563 9141380 YP_003632709.1 CDS Bmur_0407 NC_014150.1 509151 510344 D PFAM: ROK family protein; KEGG: bhy:BHWA1_00324 transcriptional repressor of the xylose operon; ROK family protein 509151..510344 Brachyspira murdochii DSM 12563 9141381 YP_003632710.1 CDS Bmur_0408 NC_014150.1 510333 511262 R KEGG: bhy:BHWA1_00311 UDP-N- acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(510333..511262) Brachyspira murdochii DSM 12563 9141382 YP_003632711.1 CDS Bmur_0409 NC_014150.1 511231 512619 R KEGG: bhy:BHWA1_00310 UDP-N-acetylmuramate--alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase complement(511231..512619) Brachyspira murdochii DSM 12563 9141383 YP_003632712.1 CDS Bmur_0410 NC_014150.1 512676 513749 R KEGG: bhy:BHWA1_00309 N-acetylglucosaminyl transferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase 28; UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(512676..513749) Brachyspira murdochii DSM 12563 9141384 YP_003632713.1 CDS Bmur_0411 NC_014150.1 513746 514840 R PFAM: cell cycle protein; KEGG: bhy:BHWA1_00308 cell cycle protein; cell cycle protein complement(513746..514840) Brachyspira murdochii DSM 12563 9141385 YP_003632714.1 CDS Bmur_0412 NC_014150.1 514867 515751 R KEGG: bhy:BHWA1_00307 toxin A; toxin A complement(514867..515751) Brachyspira murdochii DSM 12563 9141386 YP_003632715.1 CDS Bmur_0413 NC_014150.1 515900 516928 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; KEGG: bhy:BHWA1_00306 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 515900..516928 Brachyspira murdochii DSM 12563 9141387 YP_003632716.1 CDS Bmur_0414 NC_014150.1 517161 518168 R TIGRFAM: phosphate acetyltransferase; KEGG: bhy:BHWA1_00305 phosphotransacetylase; PFAM: phosphate acetyl/butaryl transferase; phosphate acetyltransferase complement(517161..518168) Brachyspira murdochii DSM 12563 9141388 YP_003632717.1 CDS Bmur_0415 NC_014150.1 518343 519113 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01124 conserved hypothetical protein containing a ferredoxin domain; 4Fe-4S ferredoxin complement(518343..519113) Brachyspira murdochii DSM 12563 9141389 YP_003632718.1 CDS Bmur_0416 NC_014150.1 519251 520393 R KEGG: pac:PPA0632 glycine amidinotransferase; PFAM: amidinotransferase; glycine amidinotransferase complement(519251..520393) Brachyspira murdochii DSM 12563 9141390 YP_003632719.1 CDS Bmur_0417 NC_014150.1 520713 521591 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_00304 permease of the drug/metabolite transporter (DMT); hypothetical protein complement(520713..521591) Brachyspira murdochii DSM 12563 9141391 YP_003632720.1 CDS Bmur_0418 NC_014150.1 521682 523316 R PFAM: ankyrin; KEGG: bhy:BHWA1_00303 ankyrin repeat-containing protein; ankyrin complement(521682..523316) Brachyspira murdochii DSM 12563 9141392 YP_003632721.1 CDS Bmur_0419 NC_014150.1 523476 524843 R TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; KEGG: bhy:BHWA1_00302 magnesium transporter; SMART: CBS domain containing protein; magnesium transporter complement(523476..524843) Brachyspira murdochii DSM 12563 9141393 YP_003632722.1 CDS Bmur_0420 NC_014150.1 524898 525566 R KEGG: bhy:BHWA1_00301 hypothetical protein; hypothetical protein complement(524898..525566) Brachyspira murdochii DSM 12563 9141394 YP_003632723.1 CDS Bmur_0421 NC_014150.1 525730 527889 D KEGG: bhy:BHWA1_00717 hypothetical protein; hypothetical protein 525730..527889 Brachyspira murdochii DSM 12563 9141395 YP_003632724.1 CDS Bmur_0422 NC_014150.1 528000 529367 D PFAM: protein of unknown function DUF88; KEGG: bhy:BHWA1_00718 hypothetical protein; hypothetical protein 528000..529367 Brachyspira murdochii DSM 12563 9141396 YP_003632725.1 CDS Bmur_0423 NC_014150.1 529398 530261 D PFAM: Prephenate dehydrogenase; KEGG: bhy:BHWA1_00719 prephenate dehydrogenase; prephenate dehydrogenase 529398..530261 Brachyspira murdochii DSM 12563 9141397 YP_003632726.1 CDS Bmur_0424 NC_014150.1 530529 532526 D TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; KEGG: bhy:BHWA1_00659 VacB, exoribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; VacB and RNase II family 3'-5' exoribonuclease 530529..532526 Brachyspira murdochii DSM 12563 9141398 YP_003632727.1 CDS Bmur_0425 NC_014150.1 532945 533676 R KEGG: bhy:BHWA1_00773 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(532945..533676) Brachyspira murdochii DSM 12563 9141399 YP_003632728.1 CDS Bmur_0426 NC_014150.1 533704 534024 R KEGG: bhy:BHWA1_00774 Glu-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C complement(533704..534024) Brachyspira murdochii DSM 12563 9141400 YP_003632729.1 CDS Bmur_0427 NC_014150.1 534142 534768 R PFAM: sugar isomerase (SIS); KEGG: bhy:BHWA1_00296 phosphoheptose isomerase; sugar isomerase complement(534142..534768) Brachyspira murdochii DSM 12563 9141401 YP_003632730.1 CDS Bmur_0428 NC_014150.1 534802 535470 R PFAM: ankyrin; KEGG: bhy:BHWA1_00295 ankyrin repeat-containing protein; ankyrin complement(534802..535470) Brachyspira murdochii DSM 12563 9141402 YP_003632731.1 CDS Bmur_0429 NC_014150.1 535593 536321 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bhy:BHWA1_00294 3-ketoacyl-(acyl-carrier- protein) reductase; short-chain dehydrogenase/reductase SDR complement(535593..536321) Brachyspira murdochii DSM 12563 9141403 YP_003632732.1 CDS Bmur_0430 NC_014150.1 536354 536851 R KEGG: bhy:BHWA1_00293 FabA FabZ, FabA/Z, beta- hydroxyacyl-acyl carrier protein (ACP)-dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(536354..536851) Brachyspira murdochii DSM 12563 9141404 YP_003632733.1 CDS Bmur_0431 NC_014150.1 536883 538055 R PFAM: beta-ketoacyl synthase; KEGG: bhy:BHWA1_00292 3-oxoacyl-(acyl carrier protein) synthase I; beta-ketoacyl synthase complement(536883..538055) Brachyspira murdochii DSM 12563 9141405 YP_003632734.1 CDS Bmur_0432 NC_014150.1 538138 540417 R KEGG: bhy:BHWA1_00291 hypothetical hypothetical protein; hypothetical protein complement(538138..540417) Brachyspira murdochii DSM 12563 9141406 YP_003632735.1 CDS Bmur_0433 NC_014150.1 540404 540982 R PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bhy:BHWA1_00290 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(540404..540982) Brachyspira murdochii DSM 12563 9141407 YP_003632736.1 CDS Bmur_0434 NC_014150.1 541064 541504 R PFAM: thioesterase; KEGG: bhy:BHWA1_00289 esterase; thioesterase complement(541064..541504) Brachyspira murdochii DSM 12563 9141408 YP_003632737.1 CDS Bmur_0435 NC_014150.1 541508 542470 R PFAM: lipid A biosynthesis acyltransferase; KEGG: bhy:BHWA1_00288 glycosyl transferase, family 2; lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(541508..542470) Brachyspira murdochii DSM 12563 9141409 YP_003632738.1 CDS Bmur_0436 NC_014150.1 542482 542826 R KEGG: bhy:BHWA1_00287 beta-hydroxyacyl-(acyl- carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ complement(542482..542826) Brachyspira murdochii DSM 12563 9141410 YP_003632739.1 CDS Bmur_0437 NC_014150.1 542828 544174 R KEGG: bhy:BHWA1_00286 AMP-binding enzyme; AMP-binding protein complement(542828..544174) Brachyspira murdochii DSM 12563 9141411 YP_003632740.1 CDS Bmur_0438 NC_014150.1 544191 544451 R PFAM: phosphopantetheine-binding; KEGG: bhy:BHWA1_00285 acyl carrier protein; phosphopantetheine-binding protein complement(544191..544451) Brachyspira murdochii DSM 12563 9141412 YP_003632741.1 CDS Bmur_0439 NC_014150.1 544503 545210 R KEGG: bhy:BHWA1_00284 hypothetical protein; hypothetical protein complement(544503..545210) Brachyspira murdochii DSM 12563 9141413 YP_003632742.1 CDS Bmur_0440 NC_014150.1 545598 545987 D KEGG: bhy:BHWA1_00283 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; MerR family transcriptional regulator 545598..545987 Brachyspira murdochii DSM 12563 9141414 YP_003632743.1 CDS Bmur_0441 NC_014150.1 546000 546470 D KEGG: bhy:BHWA1_00282 hypothetical protein; hypothetical protein 546000..546470 Brachyspira murdochii DSM 12563 9141415 YP_003632744.1 CDS Bmur_0442 NC_014150.1 546657 547502 D KEGG: bhy:BHWA1_00281 oxidoreductase, aldo/keto reductase; PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 546657..547502 Brachyspira murdochii DSM 12563 9141416 YP_003632745.1 CDS Bmur_0443 NC_014150.1 547695 548525 D PFAM: aldo/keto reductase; KEGG: bhy:BHWA1_00280 oxidoreductase, aldo/keto reductase; aldo/keto reductase 547695..548525 Brachyspira murdochii DSM 12563 9141417 YP_003632746.1 CDS Bmur_0444 NC_014150.1 548953 549930 D PFAM: aldo/keto reductase; KEGG: rfr:Rfer_2445 aldo/keto reductase; aldo/keto reductase 548953..549930 Brachyspira murdochii DSM 12563 9141418 YP_003632747.1 CDS Bmur_0445 NC_014150.1 550247 550756 D KEGG: bhy:BHWA1_00279 flavodoxin; flavodoxin 550247..550756 Brachyspira murdochii DSM 12563 9141419 YP_003632748.1 CDS Bmur_0446 NC_014150.1 550791 551240 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_00278 hypothetical protein; cupin 550791..551240 Brachyspira murdochii DSM 12563 9141420 YP_003632749.1 CDS Bmur_0447 NC_014150.1 551344 552813 D PFAM: protein of unknown function DUF323; KEGG: fsu:Fisuc_1693 protein of unknown function DUF323; hypothetical protein 551344..552813 Brachyspira murdochii DSM 12563 9141421 YP_003632750.1 CDS Bmur_0448 NC_014150.1 552937 553605 D KEGG: bhy:BHWA1_01747 hypothetical protein; hypothetical protein 552937..553605 Brachyspira murdochii DSM 12563 9141422 YP_003632751.1 CDS Bmur_0449 NC_014150.1 553602 554495 R PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: bhy:BHWA1_00647 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(553602..554495) Brachyspira murdochii DSM 12563 9141423 YP_003632752.1 CDS Bmur_0450 NC_014150.1 554653 555003 D KEGG: bhy:BHWA1_00648 regulatory protein, MerR; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 554653..555003 Brachyspira murdochii DSM 12563 9141424 YP_003632753.1 CDS Bmur_0451 NC_014150.1 555068 556261 R PFAM: (uracil-5)-methyltransferase; KEGG: bhy:BHWA1_00680 RNA methyltransferase, TrmA family; (uracil-5)-methyltransferase complement(555068..556261) Brachyspira murdochii DSM 12563 9141425 YP_003632754.1 CDS Bmur_0452 NC_014150.1 556765 558045 R KEGG: bhy:BHWA1_00682 Eis, predicted acetyltransferase-like acetyltransferase; acetyltransferase complement(556765..558045) Brachyspira murdochii DSM 12563 9141426 YP_003632755.1 CDS Bmur_0453 NC_014150.1 558091 558921 R KEGG: bhy:BHWA1_00683 hypothetical protein; hypothetical protein complement(558091..558921) Brachyspira murdochii DSM 12563 9141427 YP_003632756.1 CDS Bmur_0454 NC_014150.1 558956 559825 R KEGG: bhy:BHWA1_00684 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin complement(558956..559825) Brachyspira murdochii DSM 12563 9141428 YP_003632757.1 CDS Bmur_0455 NC_014150.1 560082 561332 D KEGG: bhy:BHWA1_00685 hypothetical protein; hypothetical protein 560082..561332 Brachyspira murdochii DSM 12563 9141429 YP_003632758.1 CDS Bmur_0456 NC_014150.1 561417 562562 D SMART: PUA domain containing protein; TIGRFAM: glutamate 5-kinase; KEGG: bhy:BHWA1_00686 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; glutamate 5-kinase 561417..562562 Brachyspira murdochii DSM 12563 9141430 YP_003632759.1 CDS Bmur_0457 NC_014150.1 562557 563558 R TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: bhy:BHWA1_00687 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase complement(562557..563558) Brachyspira murdochii DSM 12563 9141431 YP_003632760.1 CDS Bmur_0458 NC_014150.1 563564 563926 R KEGG: bhy:BHWA1_00688 REC, signal receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(563564..563926) Brachyspira murdochii DSM 12563 9141432 YP_003632761.1 CDS Bmur_0459 NC_014150.1 564061 564852 R TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: bhy:BHWA1_00689 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase complement(564061..564852) Brachyspira murdochii DSM 12563 9141433 YP_003632762.1 CDS Bmur_0460 NC_014150.1 564945 565361 R PFAM: thioesterase; KEGG: bhy:BHWA1_00013 thioesterase; thioesterase complement(564945..565361) Brachyspira murdochii DSM 12563 9141434 YP_003632763.1 CDS Bmur_0461 NC_014150.1 565712 567100 R PFAM: sodium:neurotransmitter symporter; KEGG: bhy:BHWA1_00012 sodium/chloride-dependent transporter; sodium:neurotransmitter symporter complement(565712..567100) Brachyspira murdochii DSM 12563 9141435 YP_003632764.1 CDS Bmur_0462 NC_014150.1 567267 568700 R TIGRFAM: pyruvate kinase; KEGG: bhy:BHWA1_00011 pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta; pyruvate kinase complement(567267..568700) Brachyspira murdochii DSM 12563 9141436 YP_003632765.1 CDS Bmur_0463 NC_014150.1 568851 569423 D KEGG: bhy:BHWA1_00010 hypothetical protein; hypothetical protein 568851..569423 Brachyspira murdochii DSM 12563 9141437 YP_003632766.1 CDS Bmur_0464 NC_014150.1 569420 570268 R TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: bhy:BHWA1_00009 dimethyladenosine transferase; SMART: ribosomal RNA adenine methylase transferase- like; dimethyladenosine transferase complement(569420..570268) Brachyspira murdochii DSM 12563 9141438 YP_003632767.1 CDS Bmur_0465 NC_014150.1 570258 571985 R KEGG: bhy:BHWA1_00008 hypothetical protein; hypothetical protein complement(570258..571985) Brachyspira murdochii DSM 12563 9141439 YP_003632768.1 CDS Bmur_0466 NC_014150.1 571982 572428 R KEGG: bhy:BHWA1_00007 response regulator aspartate phosphatase containing TPR repeat domain; response regulator aspartate phosphatase containing TPR repeat domain-containing protein complement(571982..572428) Brachyspira murdochii DSM 12563 9141440 YP_003632769.1 CDS Bmur_0467 NC_014150.1 572428 572733 R KEGG: bhy:BHWA1_00006 hypothetical protein; hypothetical protein complement(572428..572733) Brachyspira murdochii DSM 12563 9141441 YP_003632770.1 CDS Bmur_0468 NC_014150.1 572939 573601 D KEGG: bhy:BHWA1_00005 hypothetical protein; hypothetical protein 572939..573601 Brachyspira murdochii DSM 12563 9141442 YP_003632771.1 CDS Bmur_0469 NC_014150.1 573619 574365 D KEGG: bhy:BHWA1_00004 hypothetical protein; hypothetical protein 573619..574365 Brachyspira murdochii DSM 12563 9141443 YP_003632772.1 CDS Bmur_0470 NC_014150.1 574379 575233 R KEGG: bhy:BHWA1_00003 permease; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; RarD protein, DMT superfamily transporter complement(574379..575233) Brachyspira murdochii DSM 12563 9141444 YP_003632773.1 CDS Bmur_0471 NC_014150.1 575346 576095 R KEGG: bhy:BHWA1_00208 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin complement(575346..576095) Brachyspira murdochii DSM 12563 9141445 YP_003632774.1 CDS Bmur_0472 NC_014150.1 576260 577294 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bhy:BHWA1_00250 DH:flavin oxidoreductase/DH oxidase; NADH:flavin oxidoreductase complement(576260..577294) Brachyspira murdochii DSM 12563 9141446 YP_003632775.1 CDS Bmur_0473 NC_014150.1 577529 577888 R KEGG: bhy:BHWA1_00179 hypothetical protein; hypothetical protein complement(577529..577888) Brachyspira murdochii DSM 12563 9141447 YP_003632776.1 CDS Bmur_0474 NC_014150.1 577967 580573 R SMART: ankyrin; KEGG: bhy:BHWA1_00249 ankyrin repeat-containing protein; ankyrin complement(577967..580573) Brachyspira murdochii DSM 12563 9141448 YP_003632777.1 CDS Bmur_0475 NC_014150.1 580671 582041 R KEGG: bhy:BHWA1_00248 ankyrin repeat-containing protein; ankyrin repeat-containing protein complement(580671..582041) Brachyspira murdochii DSM 12563 9141449 YP_003632778.1 CDS Bmur_0476 NC_014150.1 582093 585017 R KEGG: bhy:BHWA1_00247 hypothetical protein; hypothetical protein complement(582093..585017) Brachyspira murdochii DSM 12563 9141450 YP_003632779.1 CDS Bmur_0477 NC_014150.1 585045 586235 R TIGRFAM: tyrosyl-tRNA synthetase; KEGG: bhy:BHWA1_00246 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tyrosyl-tRNA synthetase complement(585045..586235) Brachyspira murdochii DSM 12563 9141451 YP_003632780.1 CDS Bmur_0478 NC_014150.1 586394 587473 R PFAM: peptidase M24; creatinase; KEGG: bhy:BHWA1_00720 Xaa-Pro aminopeptidase; peptidase M24 complement(586394..587473) Brachyspira murdochii DSM 12563 9141452 YP_003632781.1 CDS Bmur_0479 NC_014150.1 587705 588145 D KEGG: bhy:BHWA1_00617 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 587705..588145 Brachyspira murdochii DSM 12563 9141453 YP_003632782.1 CDS Bmur_0480 NC_014150.1 588164 589279 D PFAM: peptidase M24; creatinase; KEGG: bhy:BHWA1_00618 PepP, Xaa-Pro aminopeptidase; peptidase M24 588164..589279 Brachyspira murdochii DSM 12563 9141454 YP_003632783.1 CDS Bmur_0481 NC_014150.1 589376 589969 D PFAM: Domain of unknown function DUF1994; KEGG: bhy:BHWA1_00733 hypothetical protein; hypothetical protein 589376..589969 Brachyspira murdochii DSM 12563 9141455 YP_003632784.1 CDS Bmur_0482 NC_014150.1 589973 590302 R KEGG: bhy:BHWA1_00024 hypothetical protein; hypothetical protein complement(589973..590302) Brachyspira murdochii DSM 12563 9141456 YP_003632785.1 CDS Bmur_0483 NC_014150.1 590312 590602 R KEGG: bhy:BHWA1_00023 hypothetical protein; hypothetical protein complement(590312..590602) Brachyspira murdochii DSM 12563 9141457 YP_003632786.1 CDS Bmur_0484 NC_014150.1 590647 591654 R PFAM: aminodeoxychorismate lyase; KEGG: bhy:BHWA1_00450 aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(590647..591654) Brachyspira murdochii DSM 12563 9141458 YP_003632787.1 CDS Bmur_0485 NC_014150.1 591728 592975 R TIGRFAM: histidyl-tRNA synthetase; KEGG: bhy:BHWA1_00451 histidyl-tRNA synthetase, class IIa; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase complement(591728..592975) Brachyspira murdochii DSM 12563 9141459 YP_003632788.1 CDS Bmur_0486 NC_014150.1 592993 595110 R KEGG: bhy:BHWA1_00452 hypothetical protein; hypothetical protein complement(592993..595110) Brachyspira murdochii DSM 12563 9141460 YP_003632789.1 CDS Bmur_0487 NC_014150.1 595244 597061 R KEGG: bhy:BHWA1_00362 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 3; elongation factor Tu domain 2 protein; selenocysteine-specific translation elongation factor complement(595244..597061) Brachyspira murdochii DSM 12563 9141461 YP_003632790.1 CDS Bmur_0488 NC_014150.1 597434 598789 R TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: bhy:BHWA1_00360 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase; L-seryl-tRNA selenium transferase complement(597434..598789) Brachyspira murdochii DSM 12563 9141462 YP_003632791.1 CDS Bmur_0489 NC_014150.1 599635 600216 D TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bhy:BHWA1_00605 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 599635..600216 Brachyspira murdochii DSM 12563 9141463 YP_003632792.1 CDS Bmur_0490 NC_014150.1 600244 601143 D KEGG: bhy:BHWA1_00604 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 600244..601143 Brachyspira murdochii DSM 12563 9141464 YP_003632793.1 CDS Bmur_0491 NC_014150.1 601181 602332 D KEGG: bhy:BHWA1_00261 hypothetical protein; hypothetical protein 601181..602332 Brachyspira murdochii DSM 12563 9141465 YP_003632794.1 CDS Bmur_0492 NC_014150.1 602379 603083 D KEGG: bhy:BHWA1_00262 hypothetical protein; hypothetical protein 602379..603083 Brachyspira murdochii DSM 12563 9141466 YP_003632795.1 CDS Bmur_0493 NC_014150.1 603094 603780 D KEGG: bhy:BHWA1_00263 hypothetical protein; hypothetical protein 603094..603780 Brachyspira murdochii DSM 12563 9141467 YP_003632796.1 CDS Bmur_0494 NC_014150.1 603996 604349 R TIGRFAM: preprotein translocase, SecG subunit; KEGG: bhy:BHWA1_02635 preprotein translocase subunit SecG; preprotein translocase subunit SecG complement(603996..604349) Brachyspira murdochii DSM 12563 9141468 YP_003632797.1 CDS Bmur_0495 NC_014150.1 604551 606149 D KEGG: bhy:BHWA1_02634 hypothetical protein; hypothetical protein 604551..606149 Brachyspira murdochii DSM 12563 9141469 YP_003632798.1 CDS Bmur_0496 NC_014150.1 606183 608936 D KEGG: bhy:BHWA1_02633 hypothetical protein; hypothetical protein 606183..608936 Brachyspira murdochii DSM 12563 9141470 YP_003632799.1 CDS Bmur_0497 NC_014150.1 608951 609724 D PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: bhy:BHWA1_02632 glucosamine-6- phosphate isomerase; glucosamine/galactosamine-6-phosphate isomerase 608951..609724 Brachyspira murdochii DSM 12563 9141471 YP_003632800.1 CDS Bmur_0498 NC_014150.1 609738 611702 D KEGG: bhy:BHWA1_02631 N-acetylglucosamine- 6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 609738..611702 Brachyspira murdochii DSM 12563 9141472 YP_003632801.1 CDS Bmur_0499 NC_014150.1 611770 614913 R KEGG: cjr:CJE0310 D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase complement(611770..614913) Brachyspira murdochii DSM 12563 9141473 YP_003632802.1 CDS Bmur_0500 NC_014150.1 615174 615848 D KEGG: bhy:BHWA1_02629 hypothetical protein; hypothetical protein 615174..615848 Brachyspira murdochii DSM 12563 9141475 YP_003632803.1 CDS Bmur_0501 NC_014150.1 616268 617335 D KEGG: bhy:BHWA1_00620 FrvX, cellulase M-like protein; PFAM: peptidase M42 family protein; glutamyl aminopeptidase 616268..617335 Brachyspira murdochii DSM 12563 9141476 YP_003632804.1 CDS Bmur_0502 NC_014150.1 617407 617835 R KEGG: bhy:BHWA1_00621 hypothetical protein; hypothetical protein complement(617407..617835) Brachyspira murdochii DSM 12563 9141477 YP_003632805.1 CDS Bmur_0503 NC_014150.1 617901 619025 R KEGG: bhy:BHWA1_00622 sialidase; sialidase complement(617901..619025) Brachyspira murdochii DSM 12563 9141478 YP_003632806.1 CDS Bmur_0504 NC_014150.1 619120 619896 R KEGG: bhy:BHWA1_00623 hypothetical protein; hypothetical protein complement(619120..619896) Brachyspira murdochii DSM 12563 9141479 YP_003632807.1 CDS Bmur_0505 NC_014150.1 620089 620190 D hypothetical protein 620089..620190 Brachyspira murdochii DSM 12563 9141480 YP_003632808.1 CDS Bmur_0506 NC_014150.1 620733 621359 D KEGG: bhy:BHWA1_00624 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 620733..621359 Brachyspira murdochii DSM 12563 9141481 YP_003632809.1 CDS Bmur_0507 NC_014150.1 621520 622197 R KEGG: bhy:BHWA1_00625 N-glycosylase/DNA lyase; DNA-(apurinic or apyrimidinic site) lyase complement(621520..622197) Brachyspira murdochii DSM 12563 9141482 YP_003632810.1 CDS Bmur_0508 NC_014150.1 622277 624001 R KEGG: apob; apolipoprotein B; hypothetical protein complement(622277..624001) Brachyspira murdochii DSM 12563 9141483 YP_003632811.1 CDS Bmur_0509 NC_014150.1 624530 625597 D PFAM: metallophosphoesterase; KEGG: bhy:BHWA1_00716 exonuclease; metallophosphoesterase 624530..625597 Brachyspira murdochii DSM 12563 9141484 YP_003632812.1 CDS Bmur_0510 NC_014150.1 625606 626643 R PFAM: glycosyl transferase 9; KEGG: bhy:BHWA1_00299 lipopolysaccharide heptosyltransferase II; glycosyl transferase complement(625606..626643) Brachyspira murdochii DSM 12563 9141485 YP_003632813.1 CDS Bmur_0511 NC_014150.1 626824 627813 D PFAM: protein of unknown function DUF534; KEGG: bhy:BHWA1_00396 ABC transporter, periplasmic component; hypothetical protein 626824..627813 Brachyspira murdochii DSM 12563 9141486 YP_003632814.1 CDS Bmur_0512 NC_014150.1 627897 629357 R KEGG: bhy:BHWA1_00782 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(627897..629357) Brachyspira murdochii DSM 12563 9141487 YP_003632815.1 CDS Bmur_0513 NC_014150.1 629452 630255 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bhy:BHWA1_00910 DP-dependent 7-alpha- hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase SDR complement(629452..630255) Brachyspira murdochii DSM 12563 9141488 YP_003632816.1 CDS Bmur_0514 NC_014150.1 630334 631647 R PFAM: multi antimicrobial extrusion protein MatE; KEGG: bhy:BHWA1_00911 NorM, Na+-driven multidrug efflux pump; multi antimicrobial extrusion protein MatE complement(630334..631647) Brachyspira murdochii DSM 12563 9141489 YP_003632817.1 CDS Bmur_0515 NC_014150.1 631947 632663 D KEGG: bhy:BHWA1_00913 hypothetical protein; hypothetical protein 631947..632663 Brachyspira murdochii DSM 12563 9141490 YP_003632818.1 CDS Bmur_0516 NC_014150.1 632729 633238 D KEGG: bhy:BHWA1_00914 hypothetical protein; hypothetical protein 632729..633238 Brachyspira murdochii DSM 12563 9141491 YP_003632819.1 CDS Bmur_0517 NC_014150.1 633248 634237 D KEGG: bhy:BHWA1_00915 MoxR-like ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; ATPase AAA 633248..634237 Brachyspira murdochii DSM 12563 9141492 YP_003632820.1 CDS Bmur_0518 NC_014150.1 634863 636314 D KEGG: bhy:BHWA1_00919 catalase; PFAM: catalase related subgroup; catalase domain protein; catalase 634863..636314 Brachyspira murdochii DSM 12563 9141493 YP_003632821.1 CDS Bmur_0519 NC_014150.1 636500 637696 R PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00947 aspartate aminotransferase; class I and II aminotransferase complement(636500..637696) Brachyspira murdochii DSM 12563 9141494 YP_003632822.1 CDS Bmur_0520 NC_014150.1 638120 639763 D KEGG: bhy:BHWA1_00948 hypothetical protein; hypothetical protein 638120..639763 Brachyspira murdochii DSM 12563 9141495 YP_003632823.1 CDS Bmur_0521 NC_014150.1 639867 640424 D KEGG: bhy:BHWA1_00949 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase 639867..640424 Brachyspira murdochii DSM 12563 9141496 YP_003632824.1 CDS Bmur_0522 NC_014150.1 640720 641184 D KEGG: bhy:BHWA1_00950 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 640720..641184 Brachyspira murdochii DSM 12563 9141497 YP_003632825.1 CDS Bmur_0523 NC_014150.1 641156 643051 D KEGG: bhy:BHWA1_00951 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 641156..643051 Brachyspira murdochii DSM 12563 9141498 YP_003632826.1 CDS Bmur_0524 NC_014150.1 643362 645242 R KEGG: dol:Dole_1466 hypothetical protein; hypothetical protein complement(643362..645242) Brachyspira murdochii DSM 12563 9141499 YP_003632827.1 CDS Bmur_0525 NC_014150.1 645313 646884 R KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein complement(645313..646884) Brachyspira murdochii DSM 12563 9141500 YP_003632828.1 CDS Bmur_0526 NC_014150.1 646902 647831 R PFAM: glycosyl transferase 2; KEGG: dae:Dtox_4133 glycosyl transferase 2; glycosyl transferase complement(646902..647831) Brachyspira murdochii DSM 12563 9141501 YP_003632829.1 CDS Bmur_0527 NC_014150.1 647879 648064 R KEGG: Av71 muscle cell intermediate filament; Av71 muscle cell intermediate filament complement(647879..648064) Brachyspira murdochii DSM 12563 9141502 YP_003632830.1 CDS Bmur_0528 NC_014150.1 648223 648780 D KEGG: bhy:BHWA1_00783 hypothetical protein; hypothetical protein 648223..648780 Brachyspira murdochii DSM 12563 9141503 YP_003632831.1 CDS Bmur_0529 NC_014150.1 648868 650628 R KEGG: conserved hypothetical protein; hypothetical protein complement(648868..650628) Brachyspira murdochii DSM 12563 9141504 YP_003632832.1 CDS Bmur_0530 NC_014150.1 650743 651300 R PFAM: flavodoxin/nitric oxide synthase; KEGG: bhy:BHWA1_00251 flavodoxin; flavodoxin/nitric oxide synthase complement(650743..651300) Brachyspira murdochii DSM 12563 9141505 YP_003632833.1 CDS Bmur_0531 NC_014150.1 651600 651839 R KEGG: bhy:BHWA1_00073 hypothetical protein; hypothetical protein complement(651600..651839) Brachyspira murdochii DSM 12563 9141506 YP_003632834.1 CDS Bmur_0532 NC_014150.1 651967 652431 D KEGG: bhy:BHWA1_00558 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 651967..652431 Brachyspira murdochii DSM 12563 9141507 YP_003632835.1 CDS Bmur_0533 NC_014150.1 652454 653227 R KEGG: bhy:BHWA1_00535 iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(652454..653227) Brachyspira murdochii DSM 12563 9141508 YP_003632836.1 CDS Bmur_0534 NC_014150.1 653229 654233 R PFAM: transport system permease; KEGG: bhy:BHWA1_00536 ferric ion ABC transpoter; transport system permease complement(653229..654233) Brachyspira murdochii DSM 12563 9141509 YP_003632837.1 CDS Bmur_0535 NC_014150.1 654241 655185 R PFAM: periplasmic binding protein; KEGG: bhy:BHWA1_00537 iron compound ABC transporter, periplasmic iron compound-binding protein; periplasmic binding protein complement(654241..655185) Brachyspira murdochii DSM 12563 9141510 YP_003632838.1 CDS Bmur_0536 NC_014150.1 655326 655955 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bhy:BHWA1_00538 biopolymer transport protein ExbB; MotA/TolQ/ExbB proton channel complement(655326..655955) Brachyspira murdochii DSM 12563 9141511 YP_003632839.1 CDS Bmur_0537 NC_014150.1 656290 657348 D SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: bhy:BHWA1_00539 N-acetyl-gamma-glutamyl- phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 656290..657348 Brachyspira murdochii DSM 12563 9141512 YP_003632840.1 CDS Bmur_0538 NC_014150.1 657806 659038 D TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bhy:BHWA1_00540 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 657806..659038 Brachyspira murdochii DSM 12563 9141513 YP_003632841.1 CDS Bmur_0539 NC_014150.1 659077 659943 D TIGRFAM: acetylglutamate kinase; KEGG: bhy:BHWA1_00541 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 659077..659943 Brachyspira murdochii DSM 12563 9141514 YP_003632842.1 CDS Bmur_0540 NC_014150.1 659981 661219 D KEGG: bhy:BHWA1_00542 ArgD, ornithine/acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 659981..661219 Brachyspira murdochii DSM 12563 9141515 YP_003632843.1 CDS Bmur_0541 NC_014150.1 661645 662856 D PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_00837 GltP, Na+/H+-dicarboxylate symporter; sodium:dicarboxylate symporter 661645..662856 Brachyspira murdochii DSM 12563 9141516 YP_003632844.1 CDS Bmur_0542 NC_014150.1 662838 663359 D PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00975 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 662838..663359 Brachyspira murdochii DSM 12563 9141517 YP_003632845.1 CDS Bmur_0545 NC_014150.1 663816 664163 D KEGG: bhy:BHWA1_00836 nitrogen regulatory protein PII; nitrogen regulatory protein PII 663816..664163 Brachyspira murdochii DSM 12563 9141520 YP_003632846.1 CDS Bmur_0546 NC_014150.1 664240 665079 R KEGG: bhy:BHWA1_00976 ferredoxin; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; RnfABCDGE type electron transport complex subunit B complement(664240..665079) Brachyspira murdochii DSM 12563 9141521 YP_003632847.1 CDS Bmur_0547 NC_014150.1 665121 665702 R KEGG: bhy:BHWA1_00977 RnfA, predicted DH:ubiquinone oxidoreductase, subunit RnfA; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit A complement(665121..665702) Brachyspira murdochii DSM 12563 9141522 YP_003632848.1 CDS Bmur_0548 NC_014150.1 665695 666354 R KEGG: bhy:BHWA1_00978 SoxR-reducing system protein RsxE; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit E complement(665695..666354) Brachyspira murdochii DSM 12563 9141523 YP_003632849.1 CDS Bmur_0549 NC_014150.1 666475 668388 R KEGG: bhy:BHWA1_00979 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(666475..668388) Brachyspira murdochii DSM 12563 9141524 YP_003632850.1 CDS Bmur_0550 NC_014150.1 668942 669646 R KEGG: bhy:BHWA1_00922 hypothetical protein; hypothetical protein complement(668942..669646) Brachyspira murdochii DSM 12563 9141525 YP_003632851.1 CDS Bmur_0551 NC_014150.1 669922 671013 R KEGG: bhy:BHWA1_01064 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A complement(669922..671013) Brachyspira murdochii DSM 12563 9141526 YP_003632852.1 CDS Bmur_0552 NC_014150.1 671164 673101 R KEGG: bhy:BHWA1_01068 cadmium-translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; cadmium-translocating P-type ATPase complement(671164..673101) Brachyspira murdochii DSM 12563 9141527 YP_003632853.1 CDS Bmur_0553 NC_014150.1 673088 673456 R KEGG: bhy:BHWA1_01069 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator complement(673088..673456) Brachyspira murdochii DSM 12563 9141528 YP_003632854.1 CDS Bmur_0554 NC_014150.1 674081 674686 D KEGG: bhy:BHWA1_01070 SmpB outer membrane protein; SmpB outer membrane protein 674081..674686 Brachyspira murdochii DSM 12563 9141529 YP_003632855.1 CDS Bmur_0555 NC_014150.1 675148 677130 D KEGG: bhy:BHWA1_01071 hypothetical protein; hypothetical protein 675148..677130 Brachyspira murdochii DSM 12563 9141530 YP_003632856.1 CDS Bmur_0556 NC_014150.1 677156 678025 D PFAM: ribosomal L11 methyltransferase; KEGG: bhy:BHWA1_01072 ribosomal protein L11 methyltransferase; ribosomal L11 methyltransferase 677156..678025 Brachyspira murdochii DSM 12563 9141531 YP_003632857.1 CDS Bmur_0557 NC_014150.1 678067 679365 D KEGG: bhy:BHWA1_01073 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 678067..679365 Brachyspira murdochii DSM 12563 9141532 YP_003632858.1 CDS Bmur_0558 NC_014150.1 679437 679838 R KEGG: bhy:BHWA1_01077 hypothetical protein; hypothetical protein complement(679437..679838) Brachyspira murdochii DSM 12563 9141533 YP_003632859.1 CDS Bmur_0559 NC_014150.1 680039 680236 D KEGG: bhy:BHWA1_00853 hypothetical protein; hypothetical protein 680039..680236 Brachyspira murdochii DSM 12563 9141534 YP_003632860.1 CDS Bmur_0560 NC_014150.1 680406 680741 R KEGG: bhy:BHWA1_00216 hypothetical protein; hypothetical protein complement(680406..680741) Brachyspira murdochii DSM 12563 9141535 YP_003632861.1 CDS Bmur_0561 NC_014150.1 680965 681729 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: bhy:BHWA1_01078 sporulation initiation inhibitor protein Soj; cobyrinic acid ac-diamide synthase 680965..681729 Brachyspira murdochii DSM 12563 9141536 YP_003632862.1 CDS Bmur_0562 NC_014150.1 681832 682770 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bhy:BHWA1_01079 stage 0 sporulation protein J; SMART: ParB domain protein nuclease; parB-like partition protein 681832..682770 Brachyspira murdochii DSM 12563 9141537 YP_003632863.1 CDS Bmur_0563 NC_014150.1 682780 684000 D KEGG: bhy:BHWA1_01080 hypothetical protein; hypothetical protein 682780..684000 Brachyspira murdochii DSM 12563 9141538 YP_003632864.1 CDS Bmur_0564 NC_014150.1 684249 684938 R KEGG: bhy:BHWA1_01081 hypothetical protein; hypothetical protein complement(684249..684938) Brachyspira murdochii DSM 12563 9141539 YP_003632865.1 CDS Bmur_0565 NC_014150.1 685164 686204 R KEGG: bhy:BHWA1_01082 hypothetical protein; hypothetical protein complement(685164..686204) Brachyspira murdochii DSM 12563 9141540 YP_003632866.1 CDS Bmur_0566 NC_014150.1 686232 687047 R KEGG: bhy:BHWA1_01083 metallo-dependent phosphatase; metallo-dependent phosphatase complement(686232..687047) Brachyspira murdochii DSM 12563 9141541 YP_003632867.1 CDS Bmur_0567 NC_014150.1 687073 688602 R SMART: metal-dependent phosphohydrolase HD region; KH domain protein; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; KEGG: bhy:BHWA1_01084 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; metal dependent phosphohydrolase complement(687073..688602) Brachyspira murdochii DSM 12563 9141542 YP_003632868.1 CDS Bmur_0568 NC_014150.1 688724 689263 R PFAM: Rubrerythrin; KEGG: bhy:BHWA1_01085 rubrerythrin fusion protein; rubrerythrin complement(688724..689263) Brachyspira murdochii DSM 12563 9141543 YP_003632869.1 CDS Bmur_0569 NC_014150.1 689483 690097 D KEGG: bhy:BHWA1_01086 cytidylate kinase; cytidylate kinase 689483..690097 Brachyspira murdochii DSM 12563 9141544 YP_003632870.1 CDS Bmur_0570 NC_014150.1 690174 690674 D KEGG: bhy:BHWA1_01087 hypothetical protein; hypothetical protein 690174..690674 Brachyspira murdochii DSM 12563 9141545 YP_003632871.1 CDS Bmur_0571 NC_014150.1 690761 691381 D KEGG: smu:SMU.31 hypothetical protein; hypothetical protein 690761..691381 Brachyspira murdochii DSM 12563 9141546 YP_003632872.1 CDS Bmur_0572 NC_014150.1 691916 692686 D KEGG: cvi:CV_3244 N-acetylglucosamine metabolism protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 691916..692686 Brachyspira murdochii DSM 12563 9141547 YP_003632873.1 CDS Bmur_0573 NC_014150.1 692807 693934 D PFAM: major facilitator superfamily MFS_1; KEGG: bhy:BHWA1_00257 major facilitator superfamily MFS 1; major facilitator superfamily protein 692807..693934 Brachyspira murdochii DSM 12563 9141548 YP_003632874.1 CDS Bmur_0574 NC_014150.1 694039 694962 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_00256 hypothetical protein; hypothetical protein 694039..694962 Brachyspira murdochii DSM 12563 9141549 YP_003632875.1 CDS Bmur_0575 NC_014150.1 695052 695558 R PFAM: Protein of unknown function DUF2147; KEGG: bhy:BHWA1_00255 signal peptide protein; hypothetical protein complement(695052..695558) Brachyspira murdochii DSM 12563 9141550 YP_003632876.1 CDS Bmur_0576 NC_014150.1 695824 696324 R PFAM: Protein of unknown function DUF2147; KEGG: bhy:BHWA1_00253 hypothetical protein; hypothetical protein complement(695824..696324) Brachyspira murdochii DSM 12563 9141551 YP_003632877.1 CDS Bmur_0577 NC_014150.1 696405 698033 R KEGG: bhy:BHWA1_00252 phytoene dehydrogenase-like protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; all-trans-retinol 13,14-reductase complement(696405..698033) Brachyspira murdochii DSM 12563 9141552 YP_003632878.1 CDS Bmur_0578 NC_014150.1 698567 700549 D KEGG: bhy:BHWA1_01021 hypothetical protein; hypothetical protein 698567..700549 Brachyspira murdochii DSM 12563 9141553 YP_003632879.1 CDS Bmur_0579 NC_014150.1 700570 700845 D KEGG: sae:NWMN_0039 hypothetical protein; hypothetical protein 700570..700845 Brachyspira murdochii DSM 12563 9141554 YP_003632880.1 CDS Bmur_0580 NC_014150.1 701039 701461 D KEGG: bhy:BHWA1_01020 rhodanese-like domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein 701039..701461 Brachyspira murdochii DSM 12563 9141555 YP_003632881.1 CDS Bmur_0581 NC_014150.1 701565 703079 R PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: bhy:BHWA1_01019 5'-nucleotidase; 5'-nucleotidase complement(701565..703079) Brachyspira murdochii DSM 12563 9141556 YP_003632882.1 CDS Bmur_0582 NC_014150.1 703252 704652 D KEGG: bhy:BHWA1_01018 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 703252..704652 Brachyspira murdochii DSM 12563 9141557 YP_003632883.1 CDS Bmur_0583 NC_014150.1 704830 705360 D KEGG: bhy:BHWA1_01015 methyl-accepting protein; methyl-accepting protein 704830..705360 Brachyspira murdochii DSM 12563 9141558 YP_003632884.1 CDS Bmur_0584 NC_014150.1 705449 706777 D KEGG: bhy:BHWA1_01015 methyl-accepting protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 705449..706777 Brachyspira murdochii DSM 12563 9141559 YP_003632885.1 CDS Bmur_0585 NC_014150.1 707166 708560 D KEGG: bhy:BHWA1_01013 hypothetical protein; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 707166..708560 Brachyspira murdochii DSM 12563 9141560 YP_003632886.1 CDS Bmur_0586 NC_014150.1 708642 710276 D PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01011 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 708642..710276 Brachyspira murdochii DSM 12563 9141561 YP_003632887.1 CDS Bmur_0587 NC_014150.1 710359 711963 D PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01010 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 710359..711963 Brachyspira murdochii DSM 12563 9141562 YP_003632888.1 CDS Bmur_0588 NC_014150.1 712040 713920 R KEGG: bhy:BHWA1_01009 fused fructose-specific PTS enzymes: IIBcomponent/IIC components; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PTS system fructose subfamily transporter subunit IIC complement(712040..713920) Brachyspira murdochii DSM 12563 9141563 YP_003632889.1 CDS Bmur_0589 NC_014150.1 713945 714862 R KEGG: bhy:BHWA1_01008 fructose-1-phosphate kinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase complement(713945..714862) Brachyspira murdochii DSM 12563 9141564 YP_003632890.1 CDS Bmur_0590 NC_014150.1 714880 715623 R KEGG: bhy:BHWA1_01007 transcription-repair coupling factor; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(714880..715623) Brachyspira murdochii DSM 12563 9141565 YP_003632891.1 CDS Bmur_0591 NC_014150.1 715897 717114 D TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_02436 metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 715897..717114 Brachyspira murdochii DSM 12563 9141566 YP_003632892.1 CDS Bmur_0592 NC_014150.1 717407 718462 D KEGG: bhy:BHWA1_00611 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 717407..718462 Brachyspira murdochii DSM 12563 9141567 YP_003632893.1 CDS Bmur_0593 NC_014150.1 718524 719438 D Unusual start codon; TIGRFAM: homoserine kinase; KEGG: bhy:BHWA1_00610 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; homoserine kinase 718524..719438 Brachyspira murdochii DSM 12563 9141568 YP_003632894.1 CDS Bmur_0594 NC_014150.1 719578 720576 D KEGG: bhy:BHWA1_00044 hypothetical protein; hypothetical protein 719578..720576 Brachyspira murdochii DSM 12563 9141569 YP_003632895.1 CDS Bmur_0595 NC_014150.1 720949 721518 R KEGG: bhy:BHWA1_00043 hypothetical protein; hypothetical protein complement(720949..721518) Brachyspira murdochii DSM 12563 9141570 YP_003632896.1 CDS Bmur_0596 NC_014150.1 721533 722351 R PFAM: ABC transporter; KEGG: bhy:BHWA1_00042 ABC-type Mn/Zn transport system; ABC transporter complement(721533..722351) Brachyspira murdochii DSM 12563 9141571 YP_003632897.1 CDS Bmur_0597 NC_014150.1 722348 723040 R KEGG: bhy:BHWA1_00041 ABC-type Mn/Zn transport system; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(722348..723040) Brachyspira murdochii DSM 12563 9141572 YP_003632898.1 CDS Bmur_0598 NC_014150.1 723044 724045 R PFAM: periplasmic solute binding protein; KEGG: bhy:BHWA1_00040 metal binding protein; periplasmic solute binding protein complement(723044..724045) Brachyspira murdochii DSM 12563 9141573 YP_003632899.1 CDS Bmur_0599 NC_014150.1 724122 724415 R KEGG: nucleoside transporter family protein; hypothetical protein complement(724122..724415) Brachyspira murdochii DSM 12563 9141574 YP_003632900.1 CDS Bmur_0600 NC_014150.1 724540 725148 R KEGG: bhy:BHWA1_00039 hypothetical protein; hypothetical protein complement(724540..725148) Brachyspira murdochii DSM 12563 9141575 YP_003632901.1 CDS Bmur_0601 NC_014150.1 725294 726379 D KEGG: bhy:BHWA1_01026 hypothetical protein; hypothetical protein 725294..726379 Brachyspira murdochii DSM 12563 9141576 YP_003632902.1 CDS Bmur_0602 NC_014150.1 726675 726908 D KEGG: bhy:BHWA1_01028 SirA like N, SirA like N, a protein of unknown function; hypothetical protein 726675..726908 Brachyspira murdochii DSM 12563 9141577 YP_003632903.1 CDS Bmur_0603 NC_014150.1 727262 728866 D PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02537 OppA, ABC-type oligopeptide transport system, periplasmic component; ABC transporter substrate-binding protein 727262..728866 Brachyspira murdochii DSM 12563 9141578 YP_003632904.1 CDS Bmur_0604 NC_014150.1 729011 729451 D KEGG: bhy:BHWA1_02538 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 729011..729451 Brachyspira murdochii DSM 12563 9141579 YP_003632905.1 CDS Bmur_0605 NC_014150.1 729475 730560 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_00845 TPR domain-containing protein; hypothetical protein complement(729475..730560) Brachyspira murdochii DSM 12563 9141580 YP_003632906.1 CDS Bmur_0606 NC_014150.1 730565 731224 R TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); KEGG: bhy:BHWA1_00846 phosphoserine phosphatase SerB; HAD-superfamily hydrolase complement(730565..731224) Brachyspira murdochii DSM 12563 9141581 YP_003632907.1 CDS Bmur_0607 NC_014150.1 731456 732025 D TIGRFAM: peptide deformylase; KEGG: bhy:BHWA1_00847 N-formylmethionyl-tRNA deformylase; PFAM: formylmethionine deformylase; peptide deformylase 731456..732025 Brachyspira murdochii DSM 12563 9141582 YP_003632908.1 CDS Bmur_0608 NC_014150.1 732055 732708 D PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bhy:BHWA1_00848 HAD-superfamily hydrolase, subfamily IA, variant 1; haloacid dehalogenase 732055..732708 Brachyspira murdochii DSM 12563 9141583 YP_003632909.1 CDS Bmur_0609 NC_014150.1 732820 734058 D KEGG: bhy:BHWA1_00849 metalloendopeptidase- like membrane protein; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; peptidase M23 732820..734058 Brachyspira murdochii DSM 12563 9141584 YP_003632910.1 CDS Bmur_0610 NC_014150.1 734183 735010 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bhy:BHWA1_00850 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 734183..735010 Brachyspira murdochii DSM 12563 9141585 YP_003632911.1 CDS Bmur_0611 NC_014150.1 735427 737022 R PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: bhy:BHWA1_00851 potassium/proton antiporter; sodium/hydrogen exchanger complement(735427..737022) Brachyspira murdochii DSM 12563 9141586 YP_003632912.1 CDS Bmur_0612 NC_014150.1 737313 738566 D KEGG: bhy:BHWA1_00021 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 737313..738566 Brachyspira murdochii DSM 12563 9141587 YP_003632913.1 CDS Bmur_0613 NC_014150.1 738643 739101 D PFAM: protein of unknown function DUF180; KEGG: bhy:BHWA1_00020 flagellar assembly protein; hypothetical protein 738643..739101 Brachyspira murdochii DSM 12563 9141588 YP_003632914.1 CDS Bmur_0614 NC_014150.1 739103 739354 D KEGG: bhy:BHWA1_00019 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; carbon storage regulator CsrA 739103..739354 Brachyspira murdochii DSM 12563 9141589 YP_003632915.1 CDS Bmur_0615 NC_014150.1 739670 740572 R KEGG: bhy:BHWA1_00018 hypothetical protein; hypothetical protein complement(739670..740572) Brachyspira murdochii DSM 12563 9141590 YP_003632916.1 CDS Bmur_0616 NC_014150.1 740782 741867 D KEGG: bhy:BHWA1_00017 hypothetical protein; hypothetical protein 740782..741867 Brachyspira murdochii DSM 12563 9141591 YP_003632917.1 CDS Bmur_0617 NC_014150.1 742034 743188 D PFAM: 2-hydroxyglutaryl-CoA dehydratase D- component; KEGG: 2-hydroxyglutaryl-CoA dehydratase D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 742034..743188 Brachyspira murdochii DSM 12563 9141592 YP_003632918.1 CDS Bmur_0618 NC_014150.1 743307 744452 D KEGG: cpy:Cphy_1489 cysteine desulfurase; TIGRFAM: cysteine desulfurase; PFAM: aminotransferase class V; cysteine desulfurase 743307..744452 Brachyspira murdochii DSM 12563 9141593 YP_003632919.1 CDS Bmur_0619 NC_014150.1 744506 745585 D KEGG: CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 744506..745585 Brachyspira murdochii DSM 12563 9141594 YP_003632920.1 CDS Bmur_0620 NC_014150.1 745783 749517 R TIGRFAM: transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; KEGG: bhy:BHWA1_01006 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor complement(745783..749517) Brachyspira murdochii DSM 12563 9141595 YP_003632921.1 CDS Bmur_0621 NC_014150.1 750817 751344 D KEGG: bhy:BHWA1_01005 hypothetical protein; hypothetical protein 750817..751344 Brachyspira murdochii DSM 12563 9141596 YP_003632922.1 CDS Bmur_0622 NC_014150.1 751524 753659 R PFAM: ankyrin; KEGG: bhy:BHWA1_00980 ankyrin repeat-containing protein; ankyrin complement(751524..753659) Brachyspira murdochii DSM 12563 9141597 YP_003632923.1 CDS Bmur_0623 NC_014150.1 754032 754904 D PFAM: flagellin domain protein; KEGG: bhy:BHWA1_00982 flagellar protein; flagellin domain-containing protein 754032..754904 Brachyspira murdochii DSM 12563 9141598 YP_003632924.1 CDS Bmur_0624 NC_014150.1 754997 755374 R PFAM: sigma-70 region 4 domain protein; KEGG: bhy:BHWA1_00983 hypothetical protein; FliA/WhiG subfamily RNA polymerase sigma-28 subunit complement(754997..755374) Brachyspira murdochii DSM 12563 9141599 YP_003632925.1 CDS Bmur_0625 NC_014150.1 755380 755604 R KEGG: bhy:BHWA1_00984 hypothetical protein; hypothetical protein complement(755380..755604) Brachyspira murdochii DSM 12563 9141600 YP_003632926.1 CDS Bmur_0626 NC_014150.1 755998 757098 R KEGG: met:M446_3122 capsular polysaccharide biosynthesis protein-like protein; capsular polysaccharide biosynthesis protein- like protein complement(755998..757098) Brachyspira murdochii DSM 12563 9141601 YP_003632927.1 CDS Bmur_0627 NC_014150.1 757222 761526 R KEGG: bhy:BHWA1_01023 CoA enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase complement(757222..761526) Brachyspira murdochii DSM 12563 9141602 YP_003632928.1 CDS Bmur_0628 NC_014150.1 761555 761905 R KEGG: bhy:BHWA1_01024 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase complement(761555..761905) Brachyspira murdochii DSM 12563 9141603 YP_003632929.1 CDS Bmur_0629 NC_014150.1 762084 762908 R PFAM: Protein of unknown function DUF2262; KEGG: bhy:BHWA1_01025 hypothetical protein; hypothetical protein complement(762084..762908) Brachyspira murdochii DSM 12563 9141604 YP_003632930.1 CDS Bmur_0630 NC_014150.1 763493 764485 D PFAM: Rieske [2Fe-2S] iron-sulfur domain; KEGG: bhy:BHWA1_01090 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) iron-sulfur domain-containing protein 763493..764485 Brachyspira murdochii DSM 12563 9141605 YP_003632931.1 CDS Bmur_0631 NC_014150.1 764559 764936 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bhy:BHWA1_01091 hypothetical protein; anti-sigma-factor antagonist 764559..764936 Brachyspira murdochii DSM 12563 9141606 YP_003632932.1 CDS Bmur_0632 NC_014150.1 764986 765990 D KEGG: bhy:BHWA1_01092 hypothetical protein; hypothetical protein 764986..765990 Brachyspira murdochii DSM 12563 9141607 YP_003632933.1 CDS Bmur_0633 NC_014150.1 766012 766947 D TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: riboflavin kinase; FAD synthetase; KEGG: bhy:BHWA1_01093 riboflavin biosynthesis protein RibF; SMART: riboflavin kinase; riboflavin biosynthesis protein RibF 766012..766947 Brachyspira murdochii DSM 12563 9141608 YP_003632934.1 CDS Bmur_0634 NC_014150.1 766914 767183 D KEGG: dba:Dbac_2419 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 766914..767183 Brachyspira murdochii DSM 12563 9141609 YP_003632935.1 CDS Bmur_0635 NC_014150.1 767244 769394 D SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: bhy:BHWA1_01095 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; polyribonucleotide nucleotidyltransferase 767244..769394 Brachyspira murdochii DSM 12563 9141610 YP_003632936.1 CDS Bmur_0637 NC_014150.1 770149 770763 R KEGG: bhy:BHWA1_00939 hypothetical protein; hypothetical protein complement(770149..770763) Brachyspira murdochii DSM 12563 9141612 YP_003632937.1 CDS Bmur_0638 NC_014150.1 770783 774043 R KEGG: bhy:BHWA1_00940 hypothetical protein; hypothetical protein complement(770783..774043) Brachyspira murdochii DSM 12563 9141613 YP_003632938.1 CDS Bmur_0639 NC_014150.1 774143 775726 R KEGG: bhy:BHWA1_00941 hypothetical protein; hypothetical protein complement(774143..775726) Brachyspira murdochii DSM 12563 9141614 YP_003632939.1 CDS Bmur_0640 NC_014150.1 776015 776338 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cpr:CPR_2022 anti-sigma F factor antagonist; anti-sigma-factor antagonist 776015..776338 Brachyspira murdochii DSM 12563 9141616 YP_003632940.1 CDS Bmur_0641 NC_014150.1 776675 777667 R KEGG: fma:FMG_0304 iron-sulfur binding reductase; iron-sulfur binding reductase complement(776675..777667) Brachyspira murdochii DSM 12563 9141617 YP_003632941.1 CDS Bmur_0642 NC_014150.1 777678 778358 R PFAM: glycosyl transferase 2; KEGG: dhd:Dhaf_3860 glycosyl transferase 2; glycosyl transferase complement(777678..778358) Brachyspira murdochii DSM 12563 9141618 YP_003632942.1 CDS Bmur_0643 NC_014150.1 778359 779018 R PFAM: Protein of unknown function DUF2064; KEGG: cbl:CLK_1999 hypothetical protein; hypothetical protein complement(778359..779018) Brachyspira murdochii DSM 12563 9141619 YP_003632943.1 CDS Bmur_0644 NC_014150.1 779019 779423 R KEGG: bcc:BCc_173 YciC; hypothetical protein complement(779019..779423) Brachyspira murdochii DSM 12563 9141620 YP_003632944.1 CDS Bmur_0645 NC_014150.1 779444 780139 R KEGG: ect:ECIAI39_1303 hypothetical protein; hypothetical protein complement(779444..780139) Brachyspira murdochii DSM 12563 9141621 YP_003632945.1 CDS Bmur_0646 NC_014150.1 780266 780943 R PFAM: SNARE associated Golgi protein; KEGG: dhd:Dhaf_3864 SNARE associated Golgi protein; hypothetical protein complement(780266..780943) Brachyspira murdochii DSM 12563 9141622 YP_003632946.1 CDS Bmur_0647 NC_014150.1 780927 781682 R PFAM: SNARE associated Golgi protein; KEGG: amt:Amet_3297 SNARE associated Golgi protein; hypothetical protein complement(780927..781682) Brachyspira murdochii DSM 12563 9141623 YP_003632947.1 CDS Bmur_0648 NC_014150.1 782190 782807 D PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: cdl:CDR20291_2907 hypothetical protein; 5TM Receptors of the LytS-YhcK type transmembrane region 782190..782807 Brachyspira murdochii DSM 12563 9141624 YP_003632948.1 CDS Bmur_0649 NC_014150.1 782800 783318 D PFAM: Protein of unknown function DUF2297; KEGG: cbi:CLJ_B1612 hypothetical protein; hypothetical protein 782800..783318 Brachyspira murdochii DSM 12563 9141625 YP_003632949.1 CDS Bmur_0650 NC_014150.1 783398 784231 D KEGG: ooe:OEOE_0830 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 783398..784231 Brachyspira murdochii DSM 12563 9141626 YP_003632950.1 CDS Bmur_0651 NC_014150.1 784216 785049 D KEGG: cbl:CLK_2892 cobalt transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 784216..785049 Brachyspira murdochii DSM 12563 9141627 YP_003632951.1 CDS Bmur_0652 NC_014150.1 785062 785802 D PFAM: cobalt transport protein; KEGG: cdf:CD0102 ABC transporter permease; cobalt transport protein 785062..785802 Brachyspira murdochii DSM 12563 9141628 YP_003632952.1 CDS Bmur_0653 NC_014150.1 785854 788061 R KEGG: bhy:BHWA1_00802 transcript cleavage factor/TPR domain containing protein; transcript cleavage factor/TPR domain containing protein complement(785854..788061) Brachyspira murdochii DSM 12563 9141629 YP_003632953.1 CDS Bmur_0654 NC_014150.1 788066 789046 R KEGG: bhy:BHWA1_00803 TPR domain-containing protein; hypothetical protein complement(788066..789046) Brachyspira murdochii DSM 12563 9141630 YP_003632954.1 CDS Bmur_0655 NC_014150.1 789223 790464 R KEGG: bhy:BHWA1_00804 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; imidazolonepropionase complement(789223..790464) Brachyspira murdochii DSM 12563 9141631 YP_003632955.1 CDS Bmur_0656 NC_014150.1 790525 791325 R PFAM: protein of unknown function DUF81; KEGG: bhy:BHWA1_00805 hypothetical protein; hypothetical protein complement(790525..791325) Brachyspira murdochii DSM 12563 9141632 YP_003632956.1 CDS Bmur_0657 NC_014150.1 791322 792029 R KEGG: bhy:BHWA1_00806 hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein complement(791322..792029) Brachyspira murdochii DSM 12563 9141633 YP_003632957.1 CDS Bmur_0658 NC_014150.1 792040 792663 R KEGG: bhy:BHWA1_00807 cytidylate kinase; cytidylate kinase complement(792040..792663) Brachyspira murdochii DSM 12563 9141634 YP_003632958.1 CDS Bmur_0659 NC_014150.1 792790 793590 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: bhy:BHWA1_00808 septum formation inhibitor-activating ATPase; cobyrinic acid ac-diamide synthase complement(792790..793590) Brachyspira murdochii DSM 12563 9141635 YP_003632959.1 CDS Bmur_0660 NC_014150.1 793592 793786 R KEGG: bhy:BHWA1_00809 hypothetical protein; hypothetical protein complement(793592..793786) Brachyspira murdochii DSM 12563 9141636 YP_003632960.1 CDS Bmur_0661 NC_014150.1 793923 794885 R PFAM: Radical SAM domain protein; KEGG: bhy:BHWA1_00810 uncharacterized Fe-S protein PflX, of pyruvate formate lyase activating protein; radical SAM protein complement(793923..794885) Brachyspira murdochii DSM 12563 9141637 YP_003632961.1 CDS Bmur_0662 NC_014150.1 795069 795995 R PFAM: indigoidine synthase A; KEGG: bhy:BHWA1_00903 indigoidine synthase A family protein; indigoidine synthase A complement(795069..795995) Brachyspira murdochii DSM 12563 9141638 YP_003632962.1 CDS Bmur_0663 NC_014150.1 796019 796966 R PFAM: PfkB domain protein; KEGG: bhy:BHWA1_00904 carbohydrate kinase, PfkB family; PfkB domain-containing protein complement(796019..796966) Brachyspira murdochii DSM 12563 9141639 YP_003632963.1 CDS Bmur_0664 NC_014150.1 796977 797588 R TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain protein; KEGG: bhy:BHWA1_00905 recombination protein RecR; SMART: Toprim sub domain protein; recombination protein RecR complement(796977..797588) Brachyspira murdochii DSM 12563 9141640 YP_003632964.1 CDS Bmur_0665 NC_014150.1 797588 798034 R KEGG: bhy:BHWA1_00906 hypothetical protein; hypothetical protein complement(797588..798034) Brachyspira murdochii DSM 12563 9141641 YP_003632965.1 CDS Bmur_0666 NC_014150.1 798287 799759 D KEGG: bhy:BHWA1_00907 curli production assembly/transport component CsgG; curli production protein CsgG 798287..799759 Brachyspira murdochii DSM 12563 9141642 YP_003632966.1 CDS Bmur_0667 NC_014150.1 799759 800355 D KEGG: bhy:BHWA1_00908 hypothetical protein; hypothetical protein 799759..800355 Brachyspira murdochii DSM 12563 9141643 YP_003632967.1 CDS Bmur_0668 NC_014150.1 800343 800837 R PFAM: Septum formation initiator; KEGG: bhy:BHWA1_00909 hypothetical protein; septum formation initiator complement(800343..800837) Brachyspira murdochii DSM 12563 9141644 YP_003632968.1 CDS Bmur_0669 NC_014150.1 801104 802474 D KEGG: bhy:BHWA1_00757 hypothetical protein; hypothetical protein 801104..802474 Brachyspira murdochii DSM 12563 9141645 YP_003632969.1 CDS Bmur_0670 NC_014150.1 802552 803187 R KEGG: hypothetical protein; hypothetical protein complement(802552..803187) Brachyspira murdochii DSM 12563 9141646 YP_003632970.1 CDS Bmur_0671 NC_014150.1 803280 804143 R KEGG: hypothetical protein; hypothetical protein complement(803280..804143) Brachyspira murdochii DSM 12563 9141647 YP_003632971.1 CDS Bmur_0672 NC_014150.1 804159 804932 R KEGG: aap:NT05HA_2062 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; Appr-1-p processing protein complement(804159..804932) Brachyspira murdochii DSM 12563 9141648 YP_003632972.1 CDS Bmur_0673 NC_014150.1 805727 807037 D TIGRFAM: FolC bifunctional protein; KEGG: bhy:BHWA1_00154 folylpolyglutamate synthase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 805727..807037 Brachyspira murdochii DSM 12563 9141649 YP_003632973.1 CDS Bmur_0674 NC_014150.1 807128 807820 R KEGG: bhy:BHWA1_00155 hypothetical protein; hypothetical protein complement(807128..807820) Brachyspira murdochii DSM 12563 9141650 YP_003632974.1 CDS Bmur_0675 NC_014150.1 807928 808614 R KEGG: bhy:BHWA1_00155 hypothetical protein; hypothetical protein complement(807928..808614) Brachyspira murdochii DSM 12563 9141651 YP_003632975.1 CDS Bmur_0676 NC_014150.1 808905 809597 R KEGG: bhy:BHWA1_00155 hypothetical protein; hypothetical protein complement(808905..809597) Brachyspira murdochii DSM 12563 9141652 YP_003632976.1 CDS Bmur_0677 NC_014150.1 809920 810423 R KEGG: bhy:BHWA1_00156 hypothetical protein; hypothetical protein complement(809920..810423) Brachyspira murdochii DSM 12563 9141653 YP_003632977.1 CDS Bmur_0678 NC_014150.1 811007 812269 R PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; glycosyl transferase group 1; KEGG: bhy:BHWA1_00157 3-deoxy-D-manno-oct-2- ulosonic acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(811007..812269) Brachyspira murdochii DSM 12563 9141654 YP_003632978.1 CDS Bmur_0679 NC_014150.1 812287 812577 R KEGG: bhy:BHWA1_00158 hypothetical protein; hypothetical protein complement(812287..812577) Brachyspira murdochii DSM 12563 9141655 YP_003632979.1 CDS Bmur_0680 NC_014150.1 812687 813109 R PFAM: protein of unknown function UPF0074; KEGG: bhy:BHWA1_00148 transcriptional regulator; BadM/Rrf2 family transcriptional regulator complement(812687..813109) Brachyspira murdochii DSM 12563 9141656 YP_003632980.1 CDS Bmur_0681 NC_014150.1 813363 813692 R PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: bhy:BHWA1_02513 phosphotransferase system cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA complement(813363..813692) Brachyspira murdochii DSM 12563 9141657 YP_003632981.1 CDS Bmur_0682 NC_014150.1 813792 815177 R PFAM: glycoside hydrolase 1; KEGG: cpr:CPR_2295 beta-glucosidase A; glycoside hydrolase 1 complement(813792..815177) Brachyspira murdochii DSM 12563 9141658 YP_003632982.1 CDS Bmur_0683 NC_014150.1 815200 816537 R TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: bhy:BHWA1_02515 phosphotransferase system cellobiose-specific component IIC; PFAM: phosphotransferase system EIIC; PTS system cellobiose-specific transporter subunit IIC complement(815200..816537) Brachyspira murdochii DSM 12563 9141659 YP_003632983.1 CDS Bmur_0684 NC_014150.1 816679 817761 R PFAM: protein of unknown function DUF871; KEGG: bhy:BHWA1_02514 hypothetical protein; hypothetical protein complement(816679..817761) Brachyspira murdochii DSM 12563 9141660 YP_003632984.1 CDS Bmur_0685 NC_014150.1 817820 818128 R PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; KEGG: bhy:BHWA1_02516 phosphotransferase system cellobiose-specific component IIB; PTS system lactose/cellobiose-specific transporter subunit IIB complement(817820..818128) Brachyspira murdochii DSM 12563 9141661 YP_003632985.1 CDS Bmur_0686 NC_014150.1 818238 820121 D PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_02517 transcriptional antiterminator , BglB; PTS modulated transcriptional regulator MtlR family 818238..820121 Brachyspira murdochii DSM 12563 9141662 YP_003632986.1 CDS Bmur_0687 NC_014150.1 820135 820404 D PFAM: phosphoryl transfer system HPr; KEGG: bhy:BHWA1_02518 phosphotransferase system, phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr 820135..820404 Brachyspira murdochii DSM 12563 9141663 YP_003632987.1 CDS Bmur_0688 NC_014150.1 820863 822029 R TIGRFAM: cysteine desulfurase NifS; KEGG: bhy:BHWA1_00812 NifS, cysteine sulfinate desulfinase/cysteine desulfurase-like enzyme; PFAM: aminotransferase class V; cysteine desulfurase complement(820863..822029) Brachyspira murdochii DSM 12563 9141664 YP_003632988.1 CDS Bmur_0689 NC_014150.1 822043 822876 R KEGG: bhy:BHWA1_00813 NifU N, NifU-like N terminal domain protein; TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; Fe-S cluster assembly protein NifU complement(822043..822876) Brachyspira murdochii DSM 12563 9141665 YP_003632989.1 CDS Bmur_0691 NC_014150.1 823331 823786 R KEGG: bhy:BHWA1_00815 hypothetical protein; hypothetical protein complement(823331..823786) Brachyspira murdochii DSM 12563 9141667 YP_003632990.1 CDS Bmur_0692 NC_014150.1 823836 824957 R PFAM: monogalactosyldiacylglycerol synthase; KEGG: bhy:BHWA1_00816 monogalactosyldiacylglycerol (MGDG) synthase; monogalactosyldiacylglycerol synthase complement(823836..824957) Brachyspira murdochii DSM 12563 9141668 YP_003632991.1 CDS Bmur_0693 NC_014150.1 825220 826335 R KEGG: bhy:BHWA1_00816 monogalactosyldiacylglycerol (MGDG) synthase; PFAM: monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase complement(825220..826335) Brachyspira murdochii DSM 12563 9141669 YP_003632992.1 CDS Bmur_0694 NC_014150.1 826481 828145 R PFAM: RNA binding S1 domain protein; KEGG: bhy:BHWA1_00817 30S ribosomal protein S1; RNA binding S1 domain-containing protein complement(826481..828145) Brachyspira murdochii DSM 12563 9141670 YP_003632993.1 CDS Bmur_0695 NC_014150.1 828195 828866 R KEGG: bhy:BHWA1_00818 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase; cytidylate kinase complement(828195..828866) Brachyspira murdochii DSM 12563 9141671 YP_003632994.1 CDS Bmur_0696 NC_014150.1 829006 829494 R KEGG: bhy:BHWA1_00819 hypothetical protein; hypothetical protein complement(829006..829494) Brachyspira murdochii DSM 12563 9141672 YP_003632995.1 CDS Bmur_0697 NC_014150.1 829590 830585 R PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00820 hypothetical protein; glycosyl transferase complement(829590..830585) Brachyspira murdochii DSM 12563 9141673 YP_003632996.1 CDS Bmur_0698 NC_014150.1 830586 831560 R TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: bhy:BHWA1_00821 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase complement(830586..831560) Brachyspira murdochii DSM 12563 9141674 YP_003632997.1 CDS Bmur_0699 NC_014150.1 831957 832877 D PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00822 glycosyl transferase 8; glycosyl transferase 831957..832877 Brachyspira murdochii DSM 12563 9141675 YP_003632998.1 CDS Bmur_0700 NC_014150.1 832906 833916 D PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase 832906..833916 Brachyspira murdochii DSM 12563 9141676 YP_003632999.1 CDS Bmur_0701 NC_014150.1 833986 835053 D PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00829 glycosyl transferase 2 protein; glycosyl transferase 833986..835053 Brachyspira murdochii DSM 12563 9141677 YP_003633000.1 CDS Bmur_0702 NC_014150.1 835059 836063 R PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase complement(835059..836063) Brachyspira murdochii DSM 12563 9141678 YP_003633001.1 CDS Bmur_0703 NC_014150.1 836077 837123 R PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00829 glycosyl transferase 2 protein; glycosyl transferase complement(836077..837123) Brachyspira murdochii DSM 12563 9141679 YP_003633002.1 CDS Bmur_0704 NC_014150.1 837139 838134 R PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase complement(837139..838134) Brachyspira murdochii DSM 12563 9141680 YP_003633003.1 CDS Bmur_0705 NC_014150.1 838150 839193 R PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase complement(838150..839193) Brachyspira murdochii DSM 12563 9141681 YP_003633004.1 CDS Bmur_0706 NC_014150.1 839402 840256 R PFAM: aldo/keto reductase; KEGG: bhy:BHWA1_00833 aldo/keto reductase; aldo/keto reductase complement(839402..840256) Brachyspira murdochii DSM 12563 9141682 YP_003633005.1 CDS Bmur_0707 NC_014150.1 840284 841318 R PFAM: MscS Mechanosensitive ion channel; KEGG: bhy:BHWA1_00834 mechanosensitive ion channel; mechanosensitive ion channel MscS complement(840284..841318) Brachyspira murdochii DSM 12563 9141683 YP_003633006.1 CDS Bmur_0708 NC_014150.1 841484 842242 D KEGG: bhy:BHWA1_00835 hypothetical protein; hypothetical protein 841484..842242 Brachyspira murdochii DSM 12563 9141684 YP_003633007.1 CDS Bmur_0709 NC_014150.1 842334 843170 R KEGG: bhy:BHWA1_00960 histidinol- phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; HisJ family histidinol phosphate phosphatase complement(842334..843170) Brachyspira murdochii DSM 12563 9141685 YP_003633008.1 CDS Bmur_0710 NC_014150.1 843415 844713 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bhy:BHWA1_00962 hemolysin; hypothetical protein complement(843415..844713) Brachyspira murdochii DSM 12563 9141687 YP_003633009.1 CDS Bmur_0711 NC_014150.1 845486 847069 D KEGG: bhy:BHWA1_00938 HTH XRE, helix-turn-helix XRE- family like containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 845486..847069 Brachyspira murdochii DSM 12563 9141688 YP_003633010.1 CDS Bmur_0712 NC_014150.1 847205 847921 R TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; KEGG: bhy:BHWA1_01150 phosphoribosylamidoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(847205..847921) Brachyspira murdochii DSM 12563 9141689 YP_003633011.1 CDS Bmur_0713 NC_014150.1 848014 848502 R TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: bhy:BHWA1_01151 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(848014..848502) Brachyspira murdochii DSM 12563 9141690 YP_003633012.1 CDS Bmur_0714 NC_014150.1 848575 848748 R KEGG: bhy:BHWA1_01274 hypothetical protein; hypothetical protein complement(848575..848748) Brachyspira murdochii DSM 12563 9141691 YP_003633013.1 CDS Bmur_0715 NC_014150.1 848848 849255 R KEGG: bhy:BHWA1_02427 hypothetical protein; hypothetical protein complement(848848..849255) Brachyspira murdochii DSM 12563 9141692 YP_003633014.1 CDS Bmur_0716 NC_014150.1 849270 850088 R PFAM: protein of unknown function DUF164; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_02428 phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(849270..850088) Brachyspira murdochii DSM 12563 9141693 YP_003633015.1 CDS Bmur_0717 NC_014150.1 850176 852266 R TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: bhy:BHWA1_02429 translation elongation factor G; SMART: elongation factor G domain IV; elongation factor G domain protein; small GTP-binding protein complement(850176..852266) Brachyspira murdochii DSM 12563 9141694 YP_003633016.1 CDS Bmur_0718 NC_014150.1 852587 854911 D KEGG: bhy:BHWA1_00756 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 852587..854911 Brachyspira murdochii DSM 12563 9141695 YP_003633017.1 CDS Bmur_0719 NC_014150.1 855319 857808 D TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; FeoA family protein; Ferrous iron transport B domain protein; KEGG: bhy:BHWA1_00859 ferrous iron transport protein B; SMART: FeoA family protein; ferrous iron transport protein B 855319..857808 Brachyspira murdochii DSM 12563 9141696 YP_003633018.1 CDS Bmur_0720 NC_014150.1 858057 858908 D KEGG: spq:SPAB_01004 hypothetical protein; hypothetical protein 858057..858908 Brachyspira murdochii DSM 12563 9141697 YP_003633019.1 CDS Bmur_0721 NC_014150.1 859182 859376 D KEGG: ferlin; ferlin 859182..859376 Brachyspira murdochii DSM 12563 9141698 YP_003633020.1 CDS Bmur_0722 NC_014150.1 859589 860131 D KEGG: tel:tll0155 transposase; hypothetical protein 859589..860131 Brachyspira murdochii DSM 12563 9141699 YP_003633021.1 CDS Bmur_0723 NC_014150.1 860242 861135 R PFAM: metallophosphoesterase; KEGG: bhy:BHWA1_01119 phosphodiesterase; metallophosphoesterase complement(860242..861135) Brachyspira murdochii DSM 12563 9141700 YP_003633022.1 CDS Bmur_0724 NC_014150.1 861154 863214 R KEGG: bhy:BHWA1_01120 hypothetical protein; hypothetical protein complement(861154..863214) Brachyspira murdochii DSM 12563 9141701 YP_003633023.1 CDS Bmur_0725 NC_014150.1 863343 863720 R KEGG: bhy:BHWA1_01121 lipoprotein involved with copper homeostasis and adhesion; lipoprotein involved with copper homeostasis and adhesion complement(863343..863720) Brachyspira murdochii DSM 12563 9141702 YP_003633024.1 CDS Bmur_0726 NC_014150.1 863835 865358 R KEGG: bhy:BHWA1_01122 lysyl-tRNA synthetase LysU (class II); TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; lysyl-tRNA synthetase complement(863835..865358) Brachyspira murdochii DSM 12563 9141703 YP_003633025.1 CDS Bmur_0727 NC_014150.1 865807 866244 R KEGG: cch:Cag_1242 VCBS; hypothetical protein complement(865807..866244) Brachyspira murdochii DSM 12563 9141704 YP_003633026.1 CDS Bmur_0728 NC_014150.1 866595 868202 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01102 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein complement(866595..868202) Brachyspira murdochii DSM 12563 9141705 YP_003633027.1 CDS Bmur_0729 NC_014150.1 868594 869172 R PFAM: phosphotransferase KptA/Tpt1; KEGG: bhy:BHWA1_01104 PTS 2-RNA, RNA 2'- phosphotransferase, Tpt1 / KptA family; phosphotransferase KptA/Tpt1 complement(868594..869172) Brachyspira murdochii DSM 12563 9141706 YP_003633028.1 CDS Bmur_0730 NC_014150.1 869301 870017 D PFAM: peptidase C26; KEGG: bhy:BHWA1_01105 predicted glutamine amidotransferase; peptidase C26 869301..870017 Brachyspira murdochii DSM 12563 9141707 YP_003633029.1 CDS Bmur_0731 NC_014150.1 870327 873422 R KEGG: bhy:BHWA1_00700 HepA, superfamily II D/R helicase, SNF2 family; PFAM: SNF2-related protein; helicase domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicase ; helicase domain protein; SNF2-related protein complement(870327..873422) Brachyspira murdochii DSM 12563 9141708 YP_003633030.1 CDS Bmur_0732 NC_014150.1 873606 874382 R PFAM: patatin; KEGG: bhy:BHWA1_00701 patatin-like phospholipase; patatin complement(873606..874382) Brachyspira murdochii DSM 12563 9141709 YP_003633031.1 CDS Bmur_0733 NC_014150.1 874400 876604 R PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: bhy:BHWA1_00702 flagellar hook-associated protein FliD; flagellar hook-associated 2 domain-containing protein complement(874400..876604) Brachyspira murdochii DSM 12563 9141710 YP_003633032.1 CDS Bmur_0734 NC_014150.1 876919 877338 R KEGG: bhy:BHWA1_00857 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator complement(876919..877338) Brachyspira murdochii DSM 12563 9141711 YP_003633033.1 CDS Bmur_0735 NC_014150.1 877342 878025 R PFAM: DNA repair protein RadC; KEGG: bhy:BHWA1_00858 DNA repair protein RadC; DNA repair protein RadC complement(877342..878025) Brachyspira murdochii DSM 12563 9141712 YP_003633034.1 CDS Bmur_0736 NC_014150.1 878177 879676 R KEGG: bhy:BHWA1_00873 hypothetical protein; hypothetical protein complement(878177..879676) Brachyspira murdochii DSM 12563 9141713 YP_003633035.1 CDS Bmur_0737 NC_014150.1 879803 880183 R KEGG: bhy:BHWA1_00874 hypothetical protein; hypothetical protein complement(879803..880183) Brachyspira murdochii DSM 12563 9141714 YP_003633036.1 CDS Bmur_0738 NC_014150.1 880314 882431 R KEGG: bhy:BHWA1_00877 hypothetical protein; hypothetical protein complement(880314..882431) Brachyspira murdochii DSM 12563 9141715 YP_003633037.1 CDS Bmur_0739 NC_014150.1 882537 884117 R KEGG: bhy:BHWA1_00875 hypothetical protein; hypothetical protein complement(882537..884117) Brachyspira murdochii DSM 12563 9141716 YP_003633038.1 CDS Bmur_0740 NC_014150.1 884403 885974 R KEGG: bhy:BHWA1_00876 hypothetical protein; hypothetical protein complement(884403..885974) Brachyspira murdochii DSM 12563 9141717 YP_003633039.1 CDS Bmur_0741 NC_014150.1 885995 886804 R KEGG: bhy:BHWA1_00878 hypothetical protein; hypothetical protein complement(885995..886804) Brachyspira murdochii DSM 12563 9141718 YP_003633040.1 CDS Bmur_0742 NC_014150.1 887057 888037 R KEGG: bhy:BHWA1_00879 hypothetical protein; hypothetical protein complement(887057..888037) Brachyspira murdochii DSM 12563 9141719 YP_003633041.1 CDS Bmur_0743 NC_014150.1 888021 889328 R PFAM: OstA family protein; KEGG: bhy:BHWA1_00880 hypothetical protein; OstA family protein complement(888021..889328) Brachyspira murdochii DSM 12563 9141720 YP_003633042.1 CDS Bmur_0744 NC_014150.1 889348 889914 R PFAM: protein of unknown function DUF1239; KEGG: bhy:BHWA1_00881 hypothetical protein; hypothetical protein complement(889348..889914) Brachyspira murdochii DSM 12563 9141721 YP_003633043.1 CDS Bmur_0745 NC_014150.1 889892 890443 R TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: bhy:BHWA1_00882 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(889892..890443) Brachyspira murdochii DSM 12563 9141722 YP_003633044.1 CDS Bmur_0746 NC_014150.1 890737 891480 R TIGRFAM: tRNA pseudouridine synthase A; KEGG: bhy:BHWA1_00885 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A complement(890737..891480) Brachyspira murdochii DSM 12563 9141725 YP_003633045.1 CDS Bmur_0747 NC_014150.1 891547 892506 R PFAM: protein of unknown function DUF534; KEGG: bhy:BHWA1_00886 ABC transporter substrate binding protein; hypothetical protein complement(891547..892506) Brachyspira murdochii DSM 12563 9141726 YP_003633046.1 CDS Bmur_0748 NC_014150.1 892683 893735 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bhy:BHWA1_00887 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 892683..893735 Brachyspira murdochii DSM 12563 9141727 YP_003633047.1 CDS Bmur_0749 NC_014150.1 893738 894796 R KEGG: bhy:BHWA1_01192 adenine-specific methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; adenine-specific DNA-methyltransferase complement(893738..894796) Brachyspira murdochii DSM 12563 9141728 YP_003633048.1 CDS Bmur_0750 NC_014150.1 894965 896089 D KEGG: cbk:CLL_A2088 hypothetical protein; hypothetical protein 894965..896089 Brachyspira murdochii DSM 12563 9141729 YP_003633049.1 CDS Bmur_0751 NC_014150.1 896474 897223 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bhy:BHWA1_01182 3-ketoacyl-(acyl-carrier- protein) reductase; short-chain dehydrogenase/reductase SDR 896474..897223 Brachyspira murdochii DSM 12563 9141730 YP_003633050.1 CDS Bmur_0752 NC_014150.1 897227 898414 R KEGG: bhy:BHWA1_02540 hypothetical protein; hypothetical protein complement(897227..898414) Brachyspira murdochii DSM 12563 9141731 YP_003633051.1 CDS Bmur_0753 NC_014150.1 898724 899401 D TIGRFAM: histidinol-phosphate phosphatase; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: bhy:BHWA1_02541 histidinol phosphatase-related protein:histidinol- phosphatephosphatase:HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase 898724..899401 Brachyspira murdochii DSM 12563 9141732 YP_003633052.1 CDS Bmur_0754 NC_014150.1 899630 901504 D PFAM: ankyrin; KEGG: bhy:BHWA1_01195 hypothetical protein; ankyrin 899630..901504 Brachyspira murdochii DSM 12563 9141733 YP_003633053.1 CDS Bmur_0755 NC_014150.1 901773 903365 R KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein complement(901773..903365) Brachyspira murdochii DSM 12563 9141734 YP_003633054.1 CDS Bmur_0756 NC_014150.1 903407 904369 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_02534 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(903407..904369) Brachyspira murdochii DSM 12563 9141735 YP_003633055.1 CDS Bmur_0757 NC_014150.1 904422 905399 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_02533 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(904422..905399) Brachyspira murdochii DSM 12563 9141736 YP_003633056.1 CDS Bmur_0758 NC_014150.1 905511 906494 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02532 binding-protein-dependent transport system, membrane component; binding-protein-dependent transport system inner membrane protein complement(905511..906494) Brachyspira murdochii DSM 12563 9141737 YP_003633057.1 CDS Bmur_0759 NC_014150.1 906514 907434 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02531 binding-protein-dependent transport system, membrane component; binding-protein-dependent transport system inner membrane protein complement(906514..907434) Brachyspira murdochii DSM 12563 9141738 YP_003633058.1 CDS Bmur_0760 NC_014150.1 908007 908390 R PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_02548 hypothetical protein; hypothetical protein complement(908007..908390) Brachyspira murdochii DSM 12563 9141739 YP_003633059.1 CDS Bmur_0761 NC_014150.1 908420 908668 R KEGG: bhy:BHWA1_02547 hypothetical protein; hypothetical protein complement(908420..908668) Brachyspira murdochii DSM 12563 9141740 YP_003633060.1 CDS Bmur_0762 NC_014150.1 908665 908925 R KEGG: bhy:BHWA1_02547 hypothetical protein; hypothetical protein complement(908665..908925) Brachyspira murdochii DSM 12563 9141741 YP_003633061.1 CDS Bmur_0763 NC_014150.1 909064 911067 D KEGG: bhy:BHWA1_02546 hypothetical protein; hypothetical protein 909064..911067 Brachyspira murdochii DSM 12563 9141742 YP_003633062.1 CDS Bmur_0764 NC_014150.1 911071 912234 R KEGG: bhy:BHWA1_02545 hypothetical protein; hypothetical protein complement(911071..912234) Brachyspira murdochii DSM 12563 9141743 YP_003633063.1 CDS Bmur_0765 NC_014150.1 912227 912745 R PFAM: metallophosphoesterase; KEGG: bhy:BHWA1_02544 phosphoesterase or phosphohydrolase; metallophosphoesterase complement(912227..912745) Brachyspira murdochii DSM 12563 9141744 YP_003633064.1 CDS Bmur_0766 NC_014150.1 912954 915362 D KEGG: bhy:BHWA1_02542 chemotaxis histidine kinase CheA; PFAM: ATP-binding region ATPase domain protein; P2 response regulator binding domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP- binding region ATPase domain protein; CheA signal transduction histidine kinase 912954..915362 Brachyspira murdochii DSM 12563 9141745 YP_003633065.1 CDS Bmur_0767 NC_014150.1 915438 916865 R PFAM: glycoside hydrolase 1; KEGG: cdf:CD3124 6-phospho-beta-glucosidase; glycoside hydrolase 1 complement(915438..916865) Brachyspira murdochii DSM 12563 9141746 YP_003633066.1 CDS Bmur_0768 NC_014150.1 917096 918442 D TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: bhy:BHWA1_02515 phosphotransferase system cellobiose-specific component IIC; PFAM: phosphotransferase system EIIC; PTS system cellobiose-specific transporter subunit IIC 917096..918442 Brachyspira murdochii DSM 12563 9141747 YP_003633067.1 CDS Bmur_0769 NC_014150.1 918525 918815 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bhy:BHWA1_02498 peptidyl-tRNA hydrolase; antibiotic biosynthesis monooxygenase complement(918525..918815) Brachyspira murdochii DSM 12563 9141748 YP_003633068.1 CDS Bmur_0770 NC_014150.1 918812 919429 R TIGRFAM: peptidyl-tRNA hydrolase; KEGG: bhy:BHWA1_02498 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(918812..919429) Brachyspira murdochii DSM 12563 9141749 YP_003633069.1 CDS Bmur_0771 NC_014150.1 919426 920016 R KEGG: bhy:BHWA1_02497 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; aminoacyl-tRNA hydrolase complement(919426..920016) Brachyspira murdochii DSM 12563 9141750 YP_003633070.1 CDS Bmur_0772 NC_014150.1 920040 920630 R KEGG: bhy:BHWA1_02496 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25-like; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 complement(920040..920630) Brachyspira murdochii DSM 12563 9141751 YP_003633071.1 CDS Bmur_0773 NC_014150.1 920651 921604 R TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: tye:THEYE_A1455 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(920651..921604) Brachyspira murdochii DSM 12563 9141752 YP_003633072.1 CDS Bmur_0774 NC_014150.1 921910 923361 D KEGG: bhy:BHWA1_02493 hypothetical protein; metal dependent phosphohydrolase 921910..923361 Brachyspira murdochii DSM 12563 9141754 YP_003633073.1 CDS Bmur_0775 NC_014150.1 923596 924669 R TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: bhy:BHWA1_02492 translation initiation factor IF-2B subunit alpha; PFAM: initiation factor 2B related; eIF-2B alpha/beta/delta-like protein complement(923596..924669) Brachyspira murdochii DSM 12563 9141755 YP_003633074.1 CDS Bmur_0776 NC_014150.1 924702 925928 R KEGG: bhy:BHWA1_02491 methylthioribose kinase; TIGRFAM: 5-methylthioribose kinase; 5-methylthioribose kinase complement(924702..925928) Brachyspira murdochii DSM 12563 9141756 YP_003633075.1 CDS Bmur_0777 NC_014150.1 926367 927725 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bhy:BHWA1_02490 DH oxidase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 926367..927725 Brachyspira murdochii DSM 12563 9141757 YP_003633076.1 CDS Bmur_0778 NC_014150.1 927944 928501 D KEGG: bhy:BHWA1_02489 hypothetical protein; hypothetical protein 927944..928501 Brachyspira murdochii DSM 12563 9141758 YP_003633077.1 CDS Bmur_0779 NC_014150.1 928650 929603 D KEGG: bhy:BHWA1_02487 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase; membrane dipeptidase 928650..929603 Brachyspira murdochii DSM 12563 9141759 YP_003633078.1 CDS Bmur_0780 NC_014150.1 929826 930902 R KEGG: bhy:BHWA1_02483 S-adenosylmethionine--tR- ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase complement(929826..930902) Brachyspira murdochii DSM 12563 9141760 YP_003633079.1 CDS Bmur_0781 NC_014150.1 930927 932561 R KEGG: bhy:BHWA1_02482 hypothetical protein; hypothetical protein complement(930927..932561) Brachyspira murdochii DSM 12563 9141761 YP_003633080.1 CDS Bmur_0782 NC_014150.1 932572 933621 R KEGG: bhy:BHWA1_02481 leader peptidase (signal peptidase I); TIGRFAM: signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(932572..933621) Brachyspira murdochii DSM 12563 9141762 YP_003633081.1 CDS Bmur_0783 NC_014150.1 933724 934953 R PFAM: 5-methylcytosine restriction system component- like protein; KEGG: pgi:PG0972 hypothetical protein; 5-methylcytosine restriction system component- like protein complement(933724..934953) Brachyspira murdochii DSM 12563 9141763 YP_003633082.1 CDS Bmur_0784 NC_014150.1 934959 936155 R PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pgi:PG0971 McrBC restriction endonuclease system, McrB subunit; ATPase AAA complement(934959..936155) Brachyspira murdochii DSM 12563 9141764 YP_003633083.1 CDS Bmur_0785 NC_014150.1 936184 936573 R KEGG: hypothetical protein; hypothetical protein complement(936184..936573) Brachyspira murdochii DSM 12563 9141765 YP_003633084.1 CDS Bmur_0786 NC_014150.1 936601 937011 R KEGG: hypothetical protein; hypothetical protein complement(936601..937011) Brachyspira murdochii DSM 12563 9141766 YP_003633085.1 CDS Bmur_0787 NC_014150.1 937070 937687 D KEGG: bhy:BHWA1_02480 hypothetical protein; hypothetical protein 937070..937687 Brachyspira murdochii DSM 12563 9141767 YP_003633086.1 CDS Bmur_0788 NC_014150.1 937792 938664 D TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: bhy:BHWA1_01154 glycyl-tRNA synthetase alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit; glycyl-tRNA synthetase subunit alpha 937792..938664 Brachyspira murdochii DSM 12563 9141768 YP_003633087.1 CDS Bmur_0789 NC_014150.1 938798 940114 R KEGG: fnu:FN0553 D-serine dehydratase; TIGRFAM: D-serine ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; D-serine ammonia-lyase complement(938798..940114) Brachyspira murdochii DSM 12563 9141769 YP_003633088.1 CDS Bmur_0790 NC_014150.1 940129 941487 R PFAM: gluconate transporter; KEGG: fnu:FN0554 D-serine permease; gluconate transporter complement(940129..941487) Brachyspira murdochii DSM 12563 9141770 YP_003633089.1 CDS Bmur_0791 NC_014150.1 941692 942333 D KEGG: fnu:FN0555 MerR family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 941692..942333 Brachyspira murdochii DSM 12563 9141771 YP_003633090.1 CDS Bmur_0792 NC_014150.1 942330 942872 R KEGG: bhy:BHWA1_02424 shikimate kinase; PFAM: shikimate kinase; shikimate kinase complement(942330..942872) Brachyspira murdochii DSM 12563 9141772 YP_003633091.1 CDS Bmur_0793 NC_014150.1 942865 943989 R TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; KEGG: bhy:BHWA1_02423 prephenate dehydratase; SMART: Chorismate mutase; chorismate mutase complement(942865..943989) Brachyspira murdochii DSM 12563 9141773 YP_003633092.1 CDS Bmur_0794 NC_014150.1 945133 946389 D KEGG: eca:ECA1639 hypothetical protein; hypothetical protein 945133..946389 Brachyspira murdochii DSM 12563 9141774 YP_003633093.1 CDS Bmur_0795 NC_014150.1 946480 947664 R TIGRFAM: S-adenosylmethionine synthetase; KEGG: bhy:BHWA1_02419 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase complement(946480..947664) Brachyspira murdochii DSM 12563 9141775 YP_003633094.1 CDS Bmur_0796 NC_014150.1 947828 948814 R KEGG: bhy:BHWA1_02420 von Willebrand factor type A (vWA) domain containing protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor A complement(947828..948814) Brachyspira murdochii DSM 12563 9141776 YP_003633095.1 CDS Bmur_0797 NC_014150.1 949278 950234 D KEGG: bhy:BHWA1_02396 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein; TRAP transporter solute receptor, TAXI family 949278..950234 Brachyspira murdochii DSM 12563 9141777 YP_003633096.1 CDS Bmur_0798 NC_014150.1 950315 950821 D PFAM: Domain of unknown function DUF1850; KEGG: bhy:BHWA1_02395 hypothetical protein; hypothetical protein 950315..950821 Brachyspira murdochii DSM 12563 9141778 YP_003633097.1 CDS Bmur_0799 NC_014150.1 950833 952806 D KEGG: bhy:BHWA1_02394 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter, 4TM/12TM fusion protein 950833..952806 Brachyspira murdochii DSM 12563 9141779 YP_003633098.1 CDS Bmur_0800 NC_014150.1 952994 953752 R PFAM: formate/nitrite transporter; KEGG: cbk:CLL_A3042 formate/nitrite family of transporter; formate/nitrite transporter complement(952994..953752) Brachyspira murdochii DSM 12563 9141780 YP_003633099.1 CDS Bmur_0801 NC_014150.1 953989 955374 D PFAM: sodium:neurotransmitter symporter; KEGG: bhy:BHWA1_02461 Na+-dependent transporters of the SNF family; sodium:neurotransmitter symporter 953989..955374 Brachyspira murdochii DSM 12563 9141781 YP_003633100.1 CDS Bmur_0802 NC_014150.1 955496 955834 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_00898 cupin domain containing protein; cupin 955496..955834 Brachyspira murdochii DSM 12563 9141782 YP_003633101.1 CDS Bmur_0803 NC_014150.1 955996 956667 D KEGG: bhy:BHWA1_00897 hypothetical protein; hypothetical protein 955996..956667 Brachyspira murdochii DSM 12563 9141783 YP_003633102.1 CDS Bmur_0804 NC_014150.1 956696 957703 D KEGG: bhy:BHWA1_00896 Na+/Ca+ exchange protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter 956696..957703 Brachyspira murdochii DSM 12563 9141784 YP_003633103.1 CDS Bmur_0805 NC_014150.1 957779 958591 D PFAM: Thioredoxin domain; KEGG: bhy:BHWA1_02614 thiol-disulfide interchange protein DsbD-like protein; thioredoxin 957779..958591 Brachyspira murdochii DSM 12563 9141785 YP_003633104.1 CDS Bmur_0806 NC_014150.1 958643 959467 D PFAM: protein of unknown function DUF255; Thioredoxin domain; KEGG: bhy:BHWA1_02615 thiol-disulfide interchange protein DsbD-like protein; hypothetical protein 958643..959467 Brachyspira murdochii DSM 12563 9141786 YP_003633105.1 CDS Bmur_0807 NC_014150.1 959614 960510 D KEGG: bhy:BHWA1_00754 hypothetical protein; hypothetical protein 959614..960510 Brachyspira murdochii DSM 12563 9141787 YP_003633106.1 CDS Bmur_0808 NC_014150.1 960514 961518 D PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_02616 glycosyl transferase 2 protein; glycosyl transferase 960514..961518 Brachyspira murdochii DSM 12563 9141788 YP_003633107.1 CDS Bmur_0809 NC_014150.1 961673 963262 D KEGG: bhy:BHWA1_02451 TPR domain-containing protein; hypothetical protein 961673..963262 Brachyspira murdochii DSM 12563 9141789 YP_003633108.1 CDS Bmur_0810 NC_014150.1 963267 964211 R PFAM: alpha/beta hydrolase fold; KEGG: bhy:BHWA1_02452 hypothetical protein; alpha/beta hydrolase complement(963267..964211) Brachyspira murdochii DSM 12563 9141790 YP_003633109.1 CDS Bmur_0811 NC_014150.1 964352 965710 R PFAM: glycoside hydrolase 4; KEGG: bhy:BHWA1_01142 glycoside hydrolase 4; glycoside hydrolase 4 complement(964352..965710) Brachyspira murdochii DSM 12563 9141791 YP_003633110.1 CDS Bmur_0812 NC_014150.1 965770 966801 R KEGG: bhy:BHWA1_01146 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein complement(965770..966801) Brachyspira murdochii DSM 12563 9141792 YP_003633111.1 CDS Bmur_0813 NC_014150.1 966882 967952 R KEGG: bhy:BHWA1_01200 hypothetical protein; hypothetical protein complement(966882..967952) Brachyspira murdochii DSM 12563 9141793 YP_003633112.1 CDS Bmur_0814 NC_014150.1 968001 968501 R KEGG: bhy:BHWA1_00924 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein complement(968001..968501) Brachyspira murdochii DSM 12563 9141794 YP_003633113.1 CDS Bmur_0815 NC_014150.1 968519 970807 R KEGG: bhy:BHWA1_00969 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein complement(968519..970807) Brachyspira murdochii DSM 12563 9141795 YP_003633114.1 CDS Bmur_0816 NC_014150.1 970818 971822 R PFAM: chromosome segregation and condensation protein ScpA; KEGG: bhy:BHWA1_00925 segregation and condensation protein A; chromosome segregation and condensation protein ScpA complement(970818..971822) Brachyspira murdochii DSM 12563 9141796 YP_003633115.1 CDS Bmur_0817 NC_014150.1 971946 972926 D PFAM: oxidoreductase domain protein; KEGG: bhy:BHWA1_00926 oxidoreductase domain containing protein; oxidoreductase domain-containing protein 971946..972926 Brachyspira murdochii DSM 12563 9141797 YP_003633116.1 CDS Bmur_0818 NC_014150.1 973042 974913 R KEGG: bhy:BHWA1_01226 hypothetical protein; hypothetical protein complement(973042..974913) Brachyspira murdochii DSM 12563 9141798 YP_003633117.1 CDS Bmur_0819 NC_014150.1 974931 975551 R KEGG: bhy:BHWA1_01225 hypothetical protein; hypothetical protein complement(974931..975551) Brachyspira murdochii DSM 12563 9141799 YP_003633118.1 CDS Bmur_0820 NC_014150.1 976003 977403 R KEGG: bhy:BHWA1_01224 glutamate synthase (DPH); TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase (NADPH), homotetrameric complement(976003..977403) Brachyspira murdochii DSM 12563 9141800 YP_003633119.1 CDS Bmur_0821 NC_014150.1 977811 978002 D KEGG: bhy:BHWA1_01222 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 977811..978002 Brachyspira murdochii DSM 12563 9141801 YP_003633120.1 CDS Bmur_0822 NC_014150.1 978027 979778 D TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: bhy:BHWA1_01221 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 978027..979778 Brachyspira murdochii DSM 12563 9141802 YP_003633121.1 CDS Bmur_0823 NC_014150.1 979866 980687 R KEGG: bhy:BHWA1_01220 hypothetical protein; hypothetical protein complement(979866..980687) Brachyspira murdochii DSM 12563 9141803 YP_003633122.1 CDS Bmur_0824 NC_014150.1 980843 981379 D KEGG: bhy:BHWA1_01219 TPR domain-containing protein; hypothetical protein 980843..981379 Brachyspira murdochii DSM 12563 9141804 YP_003633123.1 CDS Bmur_0825 NC_014150.1 981570 983246 R PFAM: ABC transporter; KEGG: bhy:BHWA1_01217 AarF, predicted unusual protein kinase; ABC transporter complement(981570..983246) Brachyspira murdochii DSM 12563 9141806 YP_003633124.1 CDS Bmur_0826 NC_014150.1 983341 983655 R KEGG: bhy:BHWA1_01216 hypothetical protein; hypothetical protein complement(983341..983655) Brachyspira murdochii DSM 12563 9141807 YP_003633125.1 CDS Bmur_0827 NC_014150.1 983785 983997 R KEGG: bhy:BHWA1_01215 hypothetical protein; hypothetical protein complement(983785..983997) Brachyspira murdochii DSM 12563 9141808 YP_003633126.1 CDS Bmur_0828 NC_014150.1 984020 984817 R PFAM: TM2 domain containing protein; KEGG: bhy:BHWA1_01214 TM2 domain containing protein; TM2 domain-containing protein complement(984020..984817) Brachyspira murdochii DSM 12563 9141809 YP_003633127.1 CDS Bmur_0829 NC_014150.1 984966 985706 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bhy:BHWA1_01213 hypothetical protein; DNA methylase N-4/N-6 domain-containing protein 984966..985706 Brachyspira murdochii DSM 12563 9141810 YP_003633128.1 CDS Bmur_0830 NC_014150.1 985835 989929 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_01212 hypothetical protein; hypothetical protein complement(985835..989929) Brachyspira murdochii DSM 12563 9141811 YP_003633129.1 CDS Bmur_0831 NC_014150.1 990035 990457 R KEGG: bhy:BHWA1_01211 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit- like; ATP synthase F1 subunit epsilon complement(990035..990457) Brachyspira murdochii DSM 12563 9141812 YP_003633130.1 CDS Bmur_0832 NC_014150.1 990474 990779 R KEGG: bhy:BHWA1_01210 hypothetical protein; hypothetical protein complement(990474..990779) Brachyspira murdochii DSM 12563 9141813 YP_003633131.1 CDS Bmur_0833 NC_014150.1 990810 991223 R PFAM: thioesterase; KEGG: bhy:BHWA1_01209 FcbC, predicted thioesterase; thioesterase complement(990810..991223) Brachyspira murdochii DSM 12563 9141814 YP_003633132.1 CDS Bmur_0834 NC_014150.1 991412 991897 D TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bhy:BHWA1_01208 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 991412..991897 Brachyspira murdochii DSM 12563 9141815 YP_003633133.1 CDS Bmur_0835 NC_014150.1 992124 993431 D TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bhy:BHWA1_01207 MiaB, 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 992124..993431 Brachyspira murdochii DSM 12563 9141816 YP_003633134.1 CDS Bmur_0836 NC_014150.1 993449 994057 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: bhy:BHWA1_01206 phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 993449..994057 Brachyspira murdochii DSM 12563 9141817 YP_003633135.1 CDS Bmur_0837 NC_014150.1 994151 995149 D KEGG: bhy:BHWA1_01205 hypothetical protein; hypothetical protein 994151..995149 Brachyspira murdochii DSM 12563 9141818 YP_003633136.1 CDS Bmur_0838 NC_014150.1 995146 996591 R KEGG: bhy:BHWA1_01204 hypothetical protein; hypothetical protein complement(995146..996591) Brachyspira murdochii DSM 12563 9141819 YP_003633137.1 CDS Bmur_0839 NC_014150.1 996782 997093 D KEGG: bhy:BHWA1_01203 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 996782..997093 Brachyspira murdochii DSM 12563 9141820 YP_003633138.1 CDS Bmur_0840 NC_014150.1 997093 997449 D PFAM: protein of unknown function DUF464; KEGG: bhy:BHWA1_01202 hypothetical protein; hypothetical protein 997093..997449 Brachyspira murdochii DSM 12563 9141821 YP_003633139.1 CDS Bmur_0841 NC_014150.1 997439 997693 D KEGG: bhy:BHWA1_01201 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 997439..997693 Brachyspira murdochii DSM 12563 9141822 YP_003633140.1 CDS Bmur_0842 NC_014150.1 997805 998551 D KEGG: mar:MAE_61040 hypothetical protein; hypothetical protein 997805..998551 Brachyspira murdochii DSM 12563 9141823 YP_003633141.1 CDS Bmur_0843 NC_014150.1 998555 999793 D KEGG: dfe:Dfer_0931 adenine-specific DNA methylase; Site-specific DNA-methyltransferase (cytosine- N(4)-specific) 998555..999793 Brachyspira murdochii DSM 12563 9141824 YP_003633142.1 CDS Bmur_0844 NC_014150.1 999853 1000929 D KEGG: bhy:BHWA1_01186 PRK00943: selenophosphate synthetase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; selenide, water dikinase 999853..1000929 Brachyspira murdochii DSM 12563 9141825 YP_003633143.1 CDS Bmur_0845 NC_014150.1 1001356 1001904 R KEGG: bhy:BHWA1_01194 hypothetical protein; hypothetical protein complement(1001356..1001904) Brachyspira murdochii DSM 12563 9141826 YP_003633144.1 CDS Bmur_0846 NC_014150.1 1001980 1002489 R PFAM: nitroreductase; KEGG: bhy:BHWA1_01193 DPH oxidoreductase 1, D(P)H; nitroreductase complement(1001980..1002489) Brachyspira murdochii DSM 12563 9141827 YP_003633145.1 CDS Bmur_0847 NC_014150.1 1002745 1003281 D KEGG: bhy:BHWA1_01191 hypothetical protein; hypothetical protein 1002745..1003281 Brachyspira murdochii DSM 12563 9141828 YP_003633146.1 CDS Bmur_0848 NC_014150.1 1003313 1004632 D PFAM: toxic anion resistance family protein; KEGG: bhy:BHWA1_01190 toxic anion resistance protein (TelA); toxic anion resistance family protein 1003313..1004632 Brachyspira murdochii DSM 12563 9141829 YP_003633147.1 CDS Bmur_0849 NC_014150.1 1004711 1005991 R KEGG: bhy:BHWA1_01199 hypothetical protein; hypothetical protein complement(1004711..1005991) Brachyspira murdochii DSM 12563 9141830 YP_003633148.1 CDS Bmur_0850 NC_014150.1 1006306 1007724 R KEGG: bhy:BHWA1_01198 hypothetical protein; hypothetical protein complement(1006306..1007724) Brachyspira murdochii DSM 12563 9141831 YP_003633149.1 CDS Bmur_0851 NC_014150.1 1008153 1009466 R KEGG: bhy:BHWA1_01197 hypothetical protein; hypothetical protein complement(1008153..1009466) Brachyspira murdochii DSM 12563 9141832 YP_003633150.1 CDS Bmur_0852 NC_014150.1 1009574 1009963 R KEGG: bhy:BHWA1_01796 hypothetical protein; hypothetical protein complement(1009574..1009963) Brachyspira murdochii DSM 12563 9141833 YP_003633151.1 CDS Bmur_0853 NC_014150.1 1010013 1010465 R KEGG: bhy:BHWA1_01196 hypothetical protein; hypothetical protein complement(1010013..1010465) Brachyspira murdochii DSM 12563 9141834 YP_003633152.1 CDS Bmur_0854 NC_014150.1 1011044 1012429 R PFAM: sodium:neurotransmitter symporter; KEGG: bhy:BHWA1_01189 Na+-dependent transporter of the SNF family; sodium:neurotransmitter symporter complement(1011044..1012429) Brachyspira murdochii DSM 12563 9141835 YP_003633153.1 CDS Bmur_0855 NC_014150.1 1012485 1013048 R KEGG: bhy:BHWA1_01188 hypothetical protein; hypothetical protein complement(1012485..1013048) Brachyspira murdochii DSM 12563 9141836 YP_003633154.1 CDS Bmur_0856 NC_014150.1 1013308 1016283 D TIGRFAM: pyruvate, phosphate dikinase; KEGG: bhy:BHWA1_01187 pyruvate phosphate dikinase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; pyruvate phosphate dikinase PEP/pyruvate- binding; pyruvate, phosphate dikinase 1013308..1016283 Brachyspira murdochii DSM 12563 9141837 YP_003633155.1 CDS Bmur_0857 NC_014150.1 1016365 1017222 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_00860 hypothetical protein; hypothetical protein complement(1016365..1017222) Brachyspira murdochii DSM 12563 9141838 YP_003633156.1 CDS Bmur_0858 NC_014150.1 1017523 1020465 D KEGG: bhy:BHWA1_00872 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; Preprotein translocase subunit SecA 1017523..1020465 Brachyspira murdochii DSM 12563 9141839 YP_003633157.1 CDS Bmur_0859 NC_014150.1 1020649 1021860 R KEGG: hypothetical protein; hypothetical protein complement(1020649..1021860) Brachyspira murdochii DSM 12563 9141840 YP_003633158.1 CDS Bmur_0860 NC_014150.1 1022408 1022986 D KEGG: bhy:BHWA1_01227 hypothetical protein; hypothetical protein 1022408..1022986 Brachyspira murdochii DSM 12563 9141841 YP_003633159.1 CDS Bmur_0861 NC_014150.1 1023049 1025535 R KEGG: bhy:BHWA1_01228 hemolysin B; ClpA, ATPases with chaperone activity, ATP-binding subunit; PFAM: ATPase AAA; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; ATPase AAA; SMART: AAA ATPase; ATPase AAA complement(1023049..1025535) Brachyspira murdochii DSM 12563 9141842 YP_003633160.1 CDS Bmur_0862 NC_014150.1 1025713 1026042 R KEGG: bhy:BHWA1_01229 hypothetical protein; hypothetical protein complement(1025713..1026042) Brachyspira murdochii DSM 12563 9141843 YP_003633161.1 CDS Bmur_0863 NC_014150.1 1026039 1026611 R KEGG: bhy:BHWA1_01230 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(1026039..1026611) Brachyspira murdochii DSM 12563 9141844 YP_003633162.1 CDS Bmur_0864 NC_014150.1 1026691 1028505 R KEGG: bhy:BHWA1_01231 membrane-associated ATP- dependent Clp protease ATP-binding subunit; PFAM: ATPase AAA; SMART: AAA ATPase; ATPase AAA complement(1026691..1028505) Brachyspira murdochii DSM 12563 9141845 YP_003633163.1 CDS Bmur_0865 NC_014150.1 1028523 1029845 R TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bhy:BHWA1_01232 MiaB, 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme YliG complement(1028523..1029845) Brachyspira murdochii DSM 12563 9141846 YP_003633164.1 CDS Bmur_0866 NC_014150.1 1029985 1031310 R KEGG: bhy:BHWA1_01233 hypothetical protein; hypothetical protein complement(1029985..1031310) Brachyspira murdochii DSM 12563 9141847 YP_003633165.1 CDS Bmur_0867 NC_014150.1 1031326 1032063 R PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bhy:BHWA1_01234 hypothetical protein; outer membrane lipoprotein carrier protein LolA complement(1031326..1032063) Brachyspira murdochii DSM 12563 9141848 YP_003633166.1 CDS Bmur_0868 NC_014150.1 1032390 1032635 D KEGG: bhy:BHWA1_01235 hypothetical protein; hypothetical protein 1032390..1032635 Brachyspira murdochii DSM 12563 9141849 YP_003633167.1 CDS Bmur_0869 NC_014150.1 1032657 1033001 D KEGG: bhy:BHWA1_01236 hypothetical protein; hypothetical protein 1032657..1033001 Brachyspira murdochii DSM 12563 9141850 YP_003633168.1 CDS Bmur_0870 NC_014150.1 1033091 1033486 R KEGG: bhy:BHWA1_01237 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein complement(1033091..1033486) Brachyspira murdochii DSM 12563 9141851 YP_003633169.1 CDS Bmur_0871 NC_014150.1 1033661 1033816 D KEGG: bhy:BHWA1_01238 hypothetical protein; hypothetical protein 1033661..1033816 Brachyspira murdochii DSM 12563 9141852 YP_003633170.1 CDS Bmur_0872 NC_014150.1 1033847 1034758 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_01239 protein of unknown function DUF6, transmembrane; hypothetical protein 1033847..1034758 Brachyspira murdochii DSM 12563 9141853 YP_003633171.1 CDS Bmur_0873 NC_014150.1 1034833 1035516 R PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; KEGG: bhy:BHWA1_01240 endonuclease III; SMART: HhH-GPD family protein; iron-sulfur cluster loop; Helix-hairpin-helix DNA-binding class 1; DNA-(apurinic or apyrimidinic site) lyase complement(1034833..1035516) Brachyspira murdochii DSM 12563 9141854 YP_003633172.1 CDS Bmur_0874 NC_014150.1 1035545 1036597 R KEGG: bhy:BHWA1_01241 hypothetical protein; hypothetical protein complement(1035545..1036597) Brachyspira murdochii DSM 12563 9141855 YP_003633173.1 CDS Bmur_0875 NC_014150.1 1036743 1037504 R KEGG: bhy:BHWA1_01242 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase complement(1036743..1037504) Brachyspira murdochii DSM 12563 9141856 YP_003633174.1 CDS Bmur_0876 NC_014150.1 1037534 1038094 R PFAM: isochorismatase hydrolase; KEGG: bhy:BHWA1_01243 isochorismatase hydrolase; isochorismatase hydrolase complement(1037534..1038094) Brachyspira murdochii DSM 12563 9141857 YP_003633175.1 CDS Bmur_0877 NC_014150.1 1038227 1039174 R PFAM: flagellar filament outer layer protein FlaA; KEGG: bhy:BHWA1_01244 flagellar filament outer layer protein FlaA; flagellar filament outer layer protein FlaA complement(1038227..1039174) Brachyspira murdochii DSM 12563 9141858 YP_003633176.1 CDS Bmur_0878 NC_014150.1 1039360 1040376 D KEGG: bhy:BHWA1_01245 hypothetical protein; hypothetical protein 1039360..1040376 Brachyspira murdochii DSM 12563 9141859 YP_003633177.1 CDS Bmur_0879 NC_014150.1 1040390 1041373 R PFAM: glycosyl transferase 9; KEGG: bhy:BHWA1_01247 RfaF, ADP-heptose:LPS heptosyltransferase; glycosyl transferase complement(1040390..1041373) Brachyspira murdochii DSM 12563 9141860 YP_003633178.1 CDS Bmur_0880 NC_014150.1 1041404 1042177 R KEGG: bhy:BHWA1_01248 hypothetical protein; hypothetical protein complement(1041404..1042177) Brachyspira murdochii DSM 12563 9141861 YP_003633179.1 CDS Bmur_0881 NC_014150.1 1042187 1042873 R KEGG: bhy:BHWA1_01249 hypothetical protein; hypothetical protein complement(1042187..1042873) Brachyspira murdochii DSM 12563 9141862 YP_003633180.1 CDS Bmur_0882 NC_014150.1 1043109 1043780 D KEGG: bhy:BHWA1_01250 hypothetical protein; hypothetical protein 1043109..1043780 Brachyspira murdochii DSM 12563 9141863 YP_003633181.1 CDS Bmur_0883 NC_014150.1 1043786 1044289 D KEGG: bhy:BHWA1_01251 hypothetical protein; hypothetical protein 1043786..1044289 Brachyspira murdochii DSM 12563 9141864 YP_003633182.1 CDS Bmur_0884 NC_014150.1 1044702 1045949 D KEGG: bhy:BHWA1_01252 FtsA, actin-like ATPase involved in cell division; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; cell division protein FtsA 1044702..1045949 Brachyspira murdochii DSM 12563 9141865 YP_003633183.1 CDS Bmur_0885 NC_014150.1 1046127 1047067 D KEGG: bhy:BHWA1_00119 hypothetical protein; manually curated; hypothetical protein join(1046127..1046528,1046528..1047067) Brachyspira murdochii DSM 12563 9141866 YP_003633184.1 CDS Bmur_0886 NC_014150.1 1047269 1047784 D PFAM: Domain of unknown function DUF1877; KEGG: bhy:BHWA1_01254 hypothetical protein; hypothetical protein 1047269..1047784 Brachyspira murdochii DSM 12563 9141867 YP_003633185.1 CDS Bmur_0887 NC_014150.1 1047856 1048419 D KEGG: bhy:BHWA1_01255 hypothetical protein; hypothetical protein 1047856..1048419 Brachyspira murdochii DSM 12563 9141868 YP_003633186.1 CDS Bmur_0888 NC_014150.1 1048433 1049293 R PFAM: protein of unknown function DUF368; KEGG: bhy:BHWA1_01256 protein of unknown function DUF368, transmembrane; hypothetical protein complement(1048433..1049293) Brachyspira murdochii DSM 12563 9141869 YP_003633187.1 CDS Bmur_0889 NC_014150.1 1049460 1050794 R KEGG: bhy:BHWA1_01295 hypothetical protein; hypothetical protein complement(1049460..1050794) Brachyspira murdochii DSM 12563 9141870 YP_003633188.1 CDS Bmur_0890 NC_014150.1 1051246 1052484 R PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_01294 GltP, Na+/H+-dicarboxylate symporter; sodium:dicarboxylate symporter complement(1051246..1052484) Brachyspira murdochii DSM 12563 9141871 YP_003633189.1 CDS Bmur_0891 NC_014150.1 1052668 1053147 D TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; KEGG: bhy:BHWA1_01293 2-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1052668..1053147 Brachyspira murdochii DSM 12563 9141872 YP_003633190.1 CDS Bmur_0892 NC_014150.1 1053160 1054152 D PFAM: squalene/phytoene synthase; KEGG: bhy:BHWA1_01292 SQS PSY, squalene/phytoene synthase-like protein; squalene/phytoene synthase 1053160..1054152 Brachyspira murdochii DSM 12563 9141873 YP_003633191.1 CDS Bmur_0893 NC_014150.1 1054269 1056191 D PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; KEGG: bhy:BHWA1_01291 TPR domain-containing protein; hypothetical protein 1054269..1056191 Brachyspira murdochii DSM 12563 9141874 YP_003633192.1 CDS Bmur_0894 NC_014150.1 1056237 1056959 D KEGG: bhy:BHWA1_01290 hypothetical protein; hypothetical protein 1056237..1056959 Brachyspira murdochii DSM 12563 9141875 YP_003633193.1 CDS Bmur_0895 NC_014150.1 1056967 1057575 D KEGG: bhy:BHWA1_01289 glucose-inhibited division protein B; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 1056967..1057575 Brachyspira murdochii DSM 12563 9141876 YP_003633194.1 CDS Bmur_0896 NC_014150.1 1057572 1058576 R PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_01288 hypothetical protein; hypothetical protein complement(1057572..1058576) Brachyspira murdochii DSM 12563 9141877 YP_003633195.1 CDS Bmur_0897 NC_014150.1 1058589 1060106 R KEGG: bhy:BHWA1_01287 hypothetical protein; hypothetical protein complement(1058589..1060106) Brachyspira murdochii DSM 12563 9141878 YP_003633196.1 CDS Bmur_0898 NC_014150.1 1060214 1061035 R KEGG: bhy:BHWA1_01286 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(1060214..1061035) Brachyspira murdochii DSM 12563 9141879 YP_003633197.1 CDS Bmur_0899 NC_014150.1 1061116 1062237 R TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; KEGG: bhy:BHWA1_01285 queuine tR-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(1061116..1062237) Brachyspira murdochii DSM 12563 9141880 YP_003633198.1 CDS Bmur_0901 NC_014150.1 1064513 1064908 R KEGG: bhy:BHWA1_01282 hypothetical protein; hypothetical protein complement(1064513..1064908) Brachyspira murdochii DSM 12563 9141882 YP_003633199.1 CDS Bmur_0902 NC_014150.1 1065123 1066967 D KEGG: bhy:BHWA1_01281 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1065123..1066967 Brachyspira murdochii DSM 12563 9141883 YP_003633200.1 CDS Bmur_0904 NC_014150.1 1068924 1069760 D KEGG: bhy:BHWA1_01280 hypothetical protein; hypothetical protein 1068924..1069760 Brachyspira murdochii DSM 12563 9141885 YP_003633201.1 CDS Bmur_0905 NC_014150.1 1069906 1070115 D KEGG: bhy:BHWA1_01279 hypothetical protein; hypothetical protein 1069906..1070115 Brachyspira murdochii DSM 12563 9141886 YP_003633202.1 CDS Bmur_0906 NC_014150.1 1070160 1070648 D KEGG: bhy:BHWA1_01278 hypothetical protein; hypothetical protein 1070160..1070648 Brachyspira murdochii DSM 12563 9141887 YP_003633203.1 CDS Bmur_0907 NC_014150.1 1070767 1071234 D KEGG: bhy:BHWA1_01277 hypothetical protein; hypothetical protein 1070767..1071234 Brachyspira murdochii DSM 12563 9141888 YP_003633204.1 CDS Bmur_0908 NC_014150.1 1071255 1071830 R KEGG: bhy:BHWA1_01276 hypothetical protein; hypothetical protein complement(1071255..1071830) Brachyspira murdochii DSM 12563 9141889 YP_003633205.1 CDS Bmur_0909 NC_014150.1 1071833 1072321 R KEGG: bhy:BHWA1_01275 hypothetical protein; hypothetical protein complement(1071833..1072321) Brachyspira murdochii DSM 12563 9141890 YP_003633206.1 CDS Bmur_0910 NC_014150.1 1072538 1073011 R KEGG: bhy:BHWA1_01275 hypothetical protein; hypothetical protein complement(1072538..1073011) Brachyspira murdochii DSM 12563 9141891 YP_003633207.1 CDS Bmur_0911 NC_014150.1 1073167 1074051 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_00721 hypothetical hypothetical protein; hypothetical protein 1073167..1074051 Brachyspira murdochii DSM 12563 9141892 YP_003633208.1 CDS Bmur_0912 NC_014150.1 1074048 1074227 R KEGG: bhy:BHWA1_01274 hypothetical protein; hypothetical protein complement(1074048..1074227) Brachyspira murdochii DSM 12563 9141893 YP_003633209.1 CDS Bmur_0913 NC_014150.1 1074298 1075377 R KEGG: bhy:BHWA1_01273 hypothetical protein; hypothetical protein complement(1074298..1075377) Brachyspira murdochii DSM 12563 9141894 YP_003633210.1 CDS Bmur_0914 NC_014150.1 1075418 1076221 R KEGG: bhy:BHWA1_01272 hypothetical protein; hypothetical protein complement(1075418..1076221) Brachyspira murdochii DSM 12563 9141895 YP_003633211.1 CDS Bmur_0915 NC_014150.1 1076267 1078669 R KEGG: bhy:BHWA1_01271 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; multi-sensor signal transduction histidine kinase complement(1076267..1078669) Brachyspira murdochii DSM 12563 9141896 YP_003633212.1 CDS Bmur_0916 NC_014150.1 1078719 1080149 R KEGG: bhy:BHWA1_01270 alpha amylase, catalytic domain protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase complement(1078719..1080149) Brachyspira murdochii DSM 12563 9141897 YP_003633213.1 CDS Bmur_0917 NC_014150.1 1080589 1081293 D SMART: response regulator receiver; KEGG: bhy:BHWA1_01269 two component transcriptional regulator, winged helix family; response regulator receiver protein 1080589..1081293 Brachyspira murdochii DSM 12563 9141898 YP_003633214.1 CDS Bmur_0918 NC_014150.1 1081305 1082114 D KEGG: bhy:BHWA1_01268 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1081305..1082114 Brachyspira murdochii DSM 12563 9141899 YP_003633215.1 CDS Bmur_0919 NC_014150.1 1082181 1082927 R KEGG: conserved hypothetical protein; hypothetical protein complement(1082181..1082927) Brachyspira murdochii DSM 12563 9141900 YP_003633216.1 CDS Bmur_0920 NC_014150.1 1082914 1084296 R KEGG: pgi:PG0545 hypothetical protein; hypothetical protein complement(1082914..1084296) Brachyspira murdochii DSM 12563 9141901 YP_003633217.1 CDS Bmur_0921 NC_014150.1 1084316 1086346 R PFAM: N-6 DNA methylase; protein of unknown function DUF450; KEGG: syp:SYNPCC7002_F0089 type I restriction modification system, N-6 DNA methylase; N-6 DNA methylase complement(1084316..1086346) Brachyspira murdochii DSM 12563 9141902 YP_003633218.1 CDS Bmur_0922 NC_014150.1 1086412 1087524 R KEGG: bhy:BHWA1_02572 hypothetical protein; hypothetical protein complement(1086412..1087524) Brachyspira murdochii DSM 12563 9141903 YP_003633219.1 CDS Bmur_0923 NC_014150.1 1087707 1088750 D PFAM: extracellular solute-binding protein family 1; KEGG: bhy:BHWA1_02571 periplasmic-iron-binding protein BitB; ABC transporter substrate-binding protein 1087707..1088750 Brachyspira murdochii DSM 12563 9141904 YP_003633220.1 CDS Bmur_0924 NC_014150.1 1088814 1089818 D PFAM: extracellular solute-binding protein family 1; KEGG: bhy:BHWA1_02570 periplasmic-iron-binding protein BitB; ABC transporter substrate-binding protein 1088814..1089818 Brachyspira murdochii DSM 12563 9141905 YP_003633221.1 CDS Bmur_0925 NC_014150.1 1089895 1091559 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02569 binding-protein-dependent transport system, inner membrane component; binding-protein-dependent transport system inner membrane protein 1089895..1091559 Brachyspira murdochii DSM 12563 9141906 YP_003633222.1 CDS Bmur_0926 NC_014150.1 1091818 1092054 R KEGG: bhy:BHWA1_02568 hypothetical protein; hypothetical protein complement(1091818..1092054) Brachyspira murdochii DSM 12563 9141907 YP_003633223.1 CDS Bmur_0927 NC_014150.1 1092080 1092847 R KEGG: bhy:BHWA1_02567 biotin-(acetyl-CoA carboxylase) ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; biotin--acetyl-CoA-carboxylase ligase complement(1092080..1092847) Brachyspira murdochii DSM 12563 9141908 YP_003633224.1 CDS Bmur_0928 NC_014150.1 1093032 1093796 D KEGG: bhy:BHWA1_02566 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 1093032..1093796 Brachyspira murdochii DSM 12563 9141909 YP_003633225.1 CDS Bmur_0929 NC_014150.1 1093908 1094642 R KEGG: bhy:BHWA1_01266 hypothetical protein; hypothetical protein complement(1093908..1094642) Brachyspira murdochii DSM 12563 9141910 YP_003633226.1 CDS Bmur_0930 NC_014150.1 1094807 1096900 R TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: bhy:BHWA1_01265 glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(1094807..1096900) Brachyspira murdochii DSM 12563 9141911 YP_003633227.1 CDS Bmur_0931 NC_014150.1 1097154 1098446 D KEGG: bhy:BHWA1_01264 UDP-3-O-acyl-N- acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1097154..1098446 Brachyspira murdochii DSM 12563 9141912 YP_003633228.1 CDS Bmur_0932 NC_014150.1 1098521 1099378 D KEGG: bhy:BHWA1_01263 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-32 subunit RpoH 1098521..1099378 Brachyspira murdochii DSM 12563 9141913 YP_003633229.1 CDS Bmur_0933 NC_014150.1 1099507 1100748 D KEGG: bhy:BHWA1_01262 hypothetical protein; hypothetical protein 1099507..1100748 Brachyspira murdochii DSM 12563 9141914 YP_003633230.1 CDS Bmur_0934 NC_014150.1 1100755 1101885 D SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: bhy:BHWA1_01261 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; oxygen-independent coproporphyrinogen III oxidase 1100755..1101885 Brachyspira murdochii DSM 12563 9141915 YP_003633231.1 CDS Bmur_0935 NC_014150.1 1101874 1102176 R PFAM: Trp repressor; KEGG: bhy:BHWA1_01260 hypothetical protein; Trp operon repressor complement(1101874..1102176) Brachyspira murdochii DSM 12563 9141916 YP_003633232.1 CDS Bmur_0936 NC_014150.1 1102339 1102920 D PFAM: ankyrin; KEGG: bhy:BHWA1_01259 ankyrin repeat-containing protein; ankyrin 1102339..1102920 Brachyspira murdochii DSM 12563 9141917 YP_003633233.1 CDS Bmur_0937 NC_014150.1 1103040 1104167 D SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: bhy:BHWA1_01258 DNA polymerase III beta (beta clamp) subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 1103040..1104167 Brachyspira murdochii DSM 12563 9141918 YP_003633234.1 CDS Bmur_0938 NC_014150.1 1104190 1104378 D KEGG: bhy:BHWA1_01257 hypothetical protein; hypothetical protein 1104190..1104378 Brachyspira murdochii DSM 12563 9141919 YP_003633235.1 CDS Bmur_0940 NC_014150.1 1104826 1105893 D KEGG: bhy:BHWA1_02418 recombinational DNA repair ATPase (RecF pathway); TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 1104826..1105893 Brachyspira murdochii DSM 12563 9141921 YP_003633236.1 CDS Bmur_0941 NC_014150.1 1105920 1106414 D PFAM: protein of unknown function DUF285 lipoprotein; KEGG: bhy:BHWA1_00703 hypothetical protein; hypothetical protein 1105920..1106414 Brachyspira murdochii DSM 12563 9141922 YP_003633237.1 CDS Bmur_0942 NC_014150.1 1106682 1108907 D KEGG: hhe:HH0050 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 1106682..1108907 Brachyspira murdochii DSM 12563 9141923 YP_003633238.1 CDS Bmur_0943 NC_014150.1 1109127 1111391 D KEGG: bhy:BHWA1_01147 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 1109127..1111391 Brachyspira murdochii DSM 12563 9141924 YP_003633239.1 CDS Bmur_0944 NC_014150.1 1111792 1113621 D KEGG: hhe:HH0050 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 1111792..1113621 Brachyspira murdochii DSM 12563 9141925 YP_003633240.1 CDS Bmur_0945 NC_014150.1 1113772 1114815 R TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bhy:BHWA1_02403 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1113772..1114815) Brachyspira murdochii DSM 12563 9141926 YP_003633241.1 CDS Bmur_0946 NC_014150.1 1115180 1117741 D TIGRFAM: alpha-glucan phosphorylase; KEGG: bhy:BHWA1_02402 alpha-glucan phosphorylase; PFAM: glycosyl transferase 35; alpha-glucan phosphorylase 1115180..1117741 Brachyspira murdochii DSM 12563 9141927 YP_003633242.1 CDS Bmur_0947 NC_014150.1 1117848 1118546 D PFAM: protein of unknown function DUF554; KEGG: bhy:BHWA1_02425 hypothetical protein; hypothetical protein 1117848..1118546 Brachyspira murdochii DSM 12563 9141928 YP_003633243.1 CDS Bmur_0948 NC_014150.1 1118587 1119666 R KEGG: bhy:BHWA1_02414 ankyrin repeat-containing protein; ankyrin repeat-containing protein complement(1118587..1119666) Brachyspira murdochii DSM 12563 9141929 YP_003633244.1 CDS Bmur_0949 NC_014150.1 1119875 1120294 D KEGG: bhy:BHWA1_02413 hypothetical protein; hypothetical protein 1119875..1120294 Brachyspira murdochii DSM 12563 9141930 YP_003633245.1 CDS Bmur_0950 NC_014150.1 1120398 1120865 D PFAM: TspO/MBR family protein; KEGG: taf:THA_1994 integral membrane protein; TspO and MBR-like protein 1120398..1120865 Brachyspira murdochii DSM 12563 9141931 YP_003633246.1 CDS Bmur_0951 NC_014150.1 1120951 1123176 D PFAM: glycoside hydrolase 2 TIM barrel; glycoside hydrolase 2 sugar binding; glycoside hydrolase 2 immunoglobulin domain protein beta- sandwich; KEGG: bhy:BHWA1_02412 beta-D-galactosidase; glycoside hydrolase 2 1120951..1123176 Brachyspira murdochii DSM 12563 9141932 YP_003633247.1 CDS Bmur_0952 NC_014150.1 1123570 1124010 D KEGG: bhy:BHWA1_02411 HTH MarR, helix turn helix multiple antibiotic resistance protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 1123570..1124010 Brachyspira murdochii DSM 12563 9141933 YP_003633248.1 CDS Bmur_0953 NC_014150.1 1124077 1124517 D KEGG: bhy:BHWA1_02410 hypothetical protein; hypothetical protein 1124077..1124517 Brachyspira murdochii DSM 12563 9141934 YP_003633249.1 CDS Bmur_0954 NC_014150.1 1124526 1125992 D KEGG: bhy:BHWA1_02409 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1124526..1125992 Brachyspira murdochii DSM 12563 9141935 YP_003633250.1 CDS Bmur_0955 NC_014150.1 1126160 1127113 D PFAM: SurA domain; PpiC-type peptidyl-prolyl cis- trans isomerase; KEGG: bhy:BHWA1_02408 PpiC-type peptidyl-prolyl cis- trans isomerase; SurA domain-containing protein 1126160..1127113 Brachyspira murdochii DSM 12563 9141936 YP_003633251.1 CDS Bmur_0956 NC_014150.1 1127261 1128214 R PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_01556 inner membrane translocator; inner-membrane translocator complement(1127261..1128214) Brachyspira murdochii DSM 12563 9141937 YP_003633252.1 CDS Bmur_0957 NC_014150.1 1128252 1129367 R PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_01555 inner-membrane-translocator; inner-membrane translocator complement(1128252..1129367) Brachyspira murdochii DSM 12563 9141938 YP_003633253.1 CDS Bmur_0958 NC_014150.1 1130122 1130979 R KEGG: bhy:BHWA1_00126 hypothetical protein; hypothetical protein complement(1130122..1130979) Brachyspira murdochii DSM 12563 9141939 YP_003633254.1 CDS Bmur_0959 NC_014150.1 1131035 1132570 R KEGG: bhy:BHWA1_01553 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1131035..1132570) Brachyspira murdochii DSM 12563 9141940 YP_003633255.1 CDS Bmur_0960 NC_014150.1 1132666 1133742 R PFAM: basic membrane lipoprotein; KEGG: bhy:BHWA1_01552 basic membrane lipoprotein; basic membrane lipoprotein complement(1132666..1133742) Brachyspira murdochii DSM 12563 9141941 YP_003633256.1 CDS Bmur_0961 NC_014150.1 1133804 1134880 R PFAM: basic membrane lipoprotein; KEGG: bhy:BHWA1_01549 basic membrane lipoprotein; basic membrane lipoprotein complement(1133804..1134880) Brachyspira murdochii DSM 12563 9141942 YP_003633257.1 CDS Bmur_0962 NC_014150.1 1134920 1135711 R PFAM: purine or other phosphorylase 1; KEGG: bhy:BHWA1_01548 uridine phosphorylase; purine or other phosphorylase 1 complement(1134920..1135711) Brachyspira murdochii DSM 12563 9141943 YP_003633258.1 CDS Bmur_0963 NC_014150.1 1135714 1136529 R PFAM: purine or other phosphorylase 1; KEGG: bhy:BHWA1_01547 uridine phosphorylase; purine or other phosphorylase 1 complement(1135714..1136529) Brachyspira murdochii DSM 12563 9141944 YP_003633259.1 CDS Bmur_0964 NC_014150.1 1136562 1137215 R TIGRFAM: deoxyribose-phosphate aldolase; KEGG: bhy:BHWA1_01546 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase complement(1136562..1137215) Brachyspira murdochii DSM 12563 9141945 YP_003633260.1 CDS Bmur_0965 NC_014150.1 1137432 1138550 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bhy:BHWA1_01545 aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(1137432..1138550) Brachyspira murdochii DSM 12563 9141946 YP_003633261.1 CDS Bmur_0966 NC_014150.1 1138767 1139207 D PFAM: ATP-binding region ATPase domain protein; KEGG: bhy:BHWA1_01544 anti-sigma factor; anti-sigma regulatory factor, serine/threonine protein kinase 1138767..1139207 Brachyspira murdochii DSM 12563 9141947 YP_003633262.1 CDS Bmur_0967 NC_014150.1 1139204 1140508 R PFAM: multi antimicrobial extrusion protein MatE; KEGG: bhy:BHWA1_01675 MATE efflux family protein; multi antimicrobial extrusion protein MatE complement(1139204..1140508) Brachyspira murdochii DSM 12563 9141948 YP_003633263.1 CDS Bmur_0968 NC_014150.1 1140810 1141544 D KEGG: bhy:BHWA1_01929 tRNA (guanine-N1)- methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 1140810..1141544 Brachyspira murdochii DSM 12563 9141949 YP_003633264.1 CDS Bmur_0969 NC_014150.1 1141544 1142035 D PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_01928 acetyltransferase; N-acetyltransferase GCN5 1141544..1142035 Brachyspira murdochii DSM 12563 9141950 YP_003633265.1 CDS Bmur_0970 NC_014150.1 1142056 1142265 D KEGG: bhy:BHWA1_02181 hypothetical protein; hypothetical protein 1142056..1142265 Brachyspira murdochii DSM 12563 9141951 YP_003633266.1 CDS Bmur_0971 NC_014150.1 1142412 1142867 D KEGG: bhy:BHWA1_02180 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 1142412..1142867 Brachyspira murdochii DSM 12563 9141952 YP_003633267.1 CDS Bmur_0972 NC_014150.1 1142881 1143279 D PFAM: ribosomal protein S9; KEGG: bhy:BHWA1_02179 30S ribosomal protein S9; 30S ribosomal protein S9 1142881..1143279 Brachyspira murdochii DSM 12563 9141953 YP_003633268.1 CDS Bmur_0973 NC_014150.1 1143322 1143687 D PFAM: zinc finger DksA/TraR C4-type; KEGG: bhy:BHWA1_02178 DNA-binding transcriptional regulator of transcription, DnaK suppressor protein; TraR/DksA family transcriptional regulator 1143322..1143687 Brachyspira murdochii DSM 12563 9141954 YP_003633269.1 CDS Bmur_0974 NC_014150.1 1143693 1145678 D TIGRFAM: primosomal protein N'; PFAM: type III restriction protein res subunit; helicase domain protein; KEGG: bhy:BHWA1_02177 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 1143693..1145678 Brachyspira murdochii DSM 12563 9141955 YP_003633270.1 CDS Bmur_0975 NC_014150.1 1145683 1146291 R TIGRFAM: DNA binding domain protein, excisionase; PFAM: response regulator receiver; KEGG: bhy:BHWA1_02176 two-component response regulator; SMART: response regulator receiver; response regulator receiver protein complement(1145683..1146291) Brachyspira murdochii DSM 12563 9141956 YP_003633271.1 CDS Bmur_0976 NC_014150.1 1146606 1147676 D KEGG: bhy:BHWA1_02175 mannose-1-phosphate guanylyltransferase; PFAM: nucleotidyl transferase; mannose-1-phosphate guanylyltransferase 1146606..1147676 Brachyspira murdochii DSM 12563 9141957 YP_003633272.1 CDS Bmur_0977 NC_014150.1 1147683 1148522 R KEGG: bhy:BHWA1_02174 hypothetical protein; hypothetical protein complement(1147683..1148522) Brachyspira murdochii DSM 12563 9141958 YP_003633273.1 CDS Bmur_0978 NC_014150.1 1148535 1149521 R KEGG: bhy:BHWA1_02173 hypothetical protein; hypothetical protein complement(1148535..1149521) Brachyspira murdochii DSM 12563 9141959 YP_003633274.1 CDS Bmur_0979 NC_014150.1 1149580 1150449 R KEGG: bhy:BHWA1_02172 4-diphosphocytidyl-2- C-methyl-D-erythritol kinase; PFAM: GHMP kinase; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase complement(1149580..1150449) Brachyspira murdochii DSM 12563 9141960 YP_003633275.1 CDS Bmur_0980 NC_014150.1 1150616 1150849 R PFAM: YcfA family protein; KEGG: tma:TM1312 hypothetical protein; hypothetical protein complement(1150616..1150849) Brachyspira murdochii DSM 12563 9141961 YP_003633276.1 CDS Bmur_0981 NC_014150.1 1150846 1151067 R PFAM: protein of unknown function UPF0150; KEGG: trq:TRQ2_1511 hypothetical protein; hypothetical protein complement(1150846..1151067) Brachyspira murdochii DSM 12563 9141962 YP_003633277.1 CDS Bmur_0982 NC_014150.1 1151188 1152777 R PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: cjd:JJD26997_0008 hypothetical protein; hypothetical protein complement(1151188..1152777) Brachyspira murdochii DSM 12563 9141963 YP_003633278.1 CDS Bmur_0983 NC_014150.1 1153129 1153545 R KEGG: bhy:BHWA1_02171 hypothetical protein; hypothetical protein complement(1153129..1153545) Brachyspira murdochii DSM 12563 9141964 YP_003633279.1 CDS Bmur_0984 NC_014150.1 1153558 1154046 R KEGG: bhy:BHWA1_02170 hypothetical protein; hypothetical protein complement(1153558..1154046) Brachyspira murdochii DSM 12563 9141965 YP_003633280.1 CDS Bmur_0985 NC_014150.1 1154043 1155230 R PFAM: CheB methylesterase; response regulator receiver; KEGG: bhy:BHWA1_02169 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase complement(1154043..1155230) Brachyspira murdochii DSM 12563 9141966 YP_003633281.1 CDS Bmur_0986 NC_014150.1 1155240 1157522 R TIGRFAM: apolipoprotein N-acyltransferase; KEGG: bhy:BHWA1_02168 apolipoprotein N- acyltransferase; apolipoprotein N-acyltransferase complement(1155240..1157522) Brachyspira murdochii DSM 12563 9141967 YP_003633282.1 CDS Bmur_0987 NC_014150.1 1157618 1158073 R KEGG: bhy:BHWA1_02167 hemerythrin-related protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein complement(1157618..1158073) Brachyspira murdochii DSM 12563 9141968 YP_003633283.1 CDS Bmur_0988 NC_014150.1 1158157 1159518 R TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; Clp ATPase-like; KEGG: bhy:BHWA1_02166 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU complement(1158157..1159518) Brachyspira murdochii DSM 12563 9141969 YP_003633284.1 CDS Bmur_0989 NC_014150.1 1159522 1160052 R PFAM: 20S proteasome A and B subunits; KEGG: bhy:BHWA1_02165 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; 20S proteasome subunits A/B complement(1159522..1160052) Brachyspira murdochii DSM 12563 9141970 YP_003633285.1 CDS Bmur_0990 NC_014150.1 1160224 1160682 R KEGG: lpc:LPC_2553 hypothetical protein; hypothetical protein complement(1160224..1160682) Brachyspira murdochii DSM 12563 9141971 YP_003633286.1 CDS Bmur_0991 NC_014150.1 1160756 1161472 R PFAM: ABC transporter; KEGG: bhy:BHWA1_02359 ABC transporter integral membrane type-2 domain containing protein; ABC transporter complement(1160756..1161472) Brachyspira murdochii DSM 12563 9141972 YP_003633287.1 CDS Bmur_0992 NC_014150.1 1161828 1162520 R KEGG: bhy:BHWA1_02358 ATP binding cassette (ABC) transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1161828..1162520) Brachyspira murdochii DSM 12563 9141973 YP_003633288.1 CDS Bmur_0993 NC_014150.1 1162844 1163578 R KEGG: bhy:BHWA1_02357 hypothetical protein; hypothetical protein complement(1162844..1163578) Brachyspira murdochii DSM 12563 9141974 YP_003633289.1 CDS Bmur_0994 NC_014150.1 1163591 1164256 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_02356 CAAX amino terminal protease; hypothetical protein complement(1163591..1164256) Brachyspira murdochii DSM 12563 9141975 YP_003633290.1 CDS Bmur_0995 NC_014150.1 1164231 1165577 R PFAM: protein of unknown function DUF181; KEGG: bhy:BHWA1_02355 streptolysin associated protein SagD; hypothetical protein complement(1164231..1165577) Brachyspira murdochii DSM 12563 9141976 YP_003633291.1 CDS Bmur_0996 NC_014150.1 1165630 1166721 R KEGG: bhy:BHWA1_02354 streptolysin associated protein SagC; streptolysin associated protein SagC complement(1165630..1166721) Brachyspira murdochii DSM 12563 9141977 YP_003633292.1 CDS Bmur_0997 NC_014150.1 1166774 1167799 R KEGG: bhy:BHWA1_02353 streptolysin associated protein SagB; TIGRFAM: SagB-type dehydrogenase domain; PFAM: nitroreductase; SagB-type dehydrogenase domain-containing protein complement(1166774..1167799) Brachyspira murdochii DSM 12563 9141978 YP_003633293.1 CDS Bmur_0998 NC_014150.1 1167963 1169510 D PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: bhy:BHWA1_02376 UshA protein; 5'-nucleotidase/2',3'-cyclic phosphodiesterase- like esterase; 5'-nucleotidase 1167963..1169510 Brachyspira murdochii DSM 12563 9141979 YP_003633294.1 CDS Bmur_0999 NC_014150.1 1169574 1170002 R KEGG: bhy:BHWA1_02343 ankyrin repeat- containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin complement(1169574..1170002) Brachyspira murdochii DSM 12563 9141980 YP_003633295.1 CDS Bmur_1000 NC_014150.1 1170125 1170907 R KEGG: bhy:BHWA1_02341 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; nucleotide pyrophosphohydrolase complement(1170125..1170907) Brachyspira murdochii DSM 12563 9141981 YP_003633296.1 CDS Bmur_1001 NC_014150.1 1170926 1171435 R KEGG: bhy:BHWA1_02340 hypothetical protein; hypothetical protein complement(1170926..1171435) Brachyspira murdochii DSM 12563 9141982 YP_003633297.1 CDS Bmur_1002 NC_014150.1 1171450 1171587 R KEGG: bhy:BHWA1_02339 hypothetical protein; hypothetical protein complement(1171450..1171587) Brachyspira murdochii DSM 12563 9141983 YP_003633298.1 CDS Bmur_1003 NC_014150.1 1171728 1172435 R PFAM: flagellar filament outer layer protein FlaA; KEGG: bhy:BHWA1_02338 flagellar filament outer layer protein FlaA; flagellar filament outer layer protein FlaA complement(1171728..1172435) Brachyspira murdochii DSM 12563 9141984 YP_003633299.1 CDS Bmur_1004 NC_014150.1 1172460 1173296 R PFAM: flagellar filament outer layer protein FlaA; KEGG: bhy:BHWA1_02337 flagellar filament outer layer protein FlaA; flagellar filament outer layer protein FlaA complement(1172460..1173296) Brachyspira murdochii DSM 12563 9141985 YP_003633300.1 CDS Bmur_1005 NC_014150.1 1173525 1174208 D KEGG: bhy:BHWA1_02336 pseudouridylate synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1173525..1174208 Brachyspira murdochii DSM 12563 9141986 YP_003633301.1 CDS Bmur_1006 NC_014150.1 1174419 1176224 D KEGG: bhy:BHWA1_01302 methyl-accepting chemotaxis- like domains (chemotaxis sensory transducer); PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 1174419..1176224 Brachyspira murdochii DSM 12563 9141987 YP_003633302.1 CDS Bmur_1007 NC_014150.1 1176299 1176931 D KEGG: bhy:BHWA1_02334 hypothetical protein; hypothetical protein 1176299..1176931 Brachyspira murdochii DSM 12563 9141988 YP_003633303.1 CDS Bmur_1008 NC_014150.1 1176959 1177573 D KEGG: bhy:BHWA1_02333 hypothetical protein; hypothetical protein 1176959..1177573 Brachyspira murdochii DSM 12563 9141989 YP_003633304.1 CDS Bmur_1009 NC_014150.1 1177619 1179364 R KEGG: bhy:BHWA1_02332 exoribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; exoribonuclease II complement(1177619..1179364) Brachyspira murdochii DSM 12563 9141990 YP_003633305.1 CDS Bmur_1010 NC_014150.1 1179623 1180732 D TIGRFAM: chorismate synthase; KEGG: bhy:BHWA1_01410 chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1179623..1180732 Brachyspira murdochii DSM 12563 9141991 YP_003633306.1 CDS Bmur_1011 NC_014150.1 1181132 1181905 R PFAM: Protein of unknown function DUF2262; KEGG: bhy:BHWA1_01975 hypothetical membrane spanning protein; hypothetical protein complement(1181132..1181905) Brachyspira murdochii DSM 12563 9141992 YP_003633307.1 CDS Bmur_1012 NC_014150.1 1182236 1183039 R PFAM: Protein of unknown function DUF2262; KEGG: bhy:BHWA1_01976 hypothetical protein; hypothetical protein complement(1182236..1183039) Brachyspira murdochii DSM 12563 9141993 YP_003633308.1 CDS Bmur_1013 NC_014150.1 1183252 1186578 R KEGG: bhy:BHWA1_01977 hypothetical protein; hypothetical protein complement(1183252..1186578) Brachyspira murdochii DSM 12563 9141994 YP_003633309.1 CDS Bmur_1014 NC_014150.1 1186878 1188221 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_01978 hypothetical protein; hypothetical protein complement(1186878..1188221) Brachyspira murdochii DSM 12563 9141995 YP_003633310.1 CDS Bmur_1015 NC_014150.1 1188900 1190225 D KEGG: bhy:BHWA1_01419 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; fagellar hook-basal body protein 1188900..1190225 Brachyspira murdochii DSM 12563 9141997 YP_003633311.1 CDS Bmur_1016 NC_014150.1 1190289 1190513 D PFAM: flagellar FlbD family protein; KEGG: bhy:BHWA1_01418 flagellar family protein; flagellar FlbD family protein 1190289..1190513 Brachyspira murdochii DSM 12563 9141998 YP_003633312.1 CDS Bmur_1017 NC_014150.1 1190552 1191343 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: bhy:BHWA1_01417 flagellar motor protein; MotA/TolQ/ExbB proton channel 1190552..1191343 Brachyspira murdochii DSM 12563 9141999 YP_003633313.1 CDS Bmur_1018 NC_014150.1 1191360 1192160 D PFAM: OmpA/MotB domain protein; KEGG: bhy:BHWA1_01416 flagellar motor protein; OmpA/MotB domain-containing protein 1191360..1192160 Brachyspira murdochii DSM 12563 9142000 YP_003633314.1 CDS Bmur_1019 NC_014150.1 1192188 1193060 D KEGG: bhy:BHWA1_01415 SAM-dependant methyltransferase; SAM-dependent methyltransferase 1192188..1193060 Brachyspira murdochii DSM 12563 9142001 YP_003633315.1 CDS Bmur_1020 NC_014150.1 1193115 1194860 R KEGG: bhy:BHWA1_01414 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoenolpyruvate-protein phosphotransferase complement(1193115..1194860) Brachyspira murdochii DSM 12563 9142002 YP_003633316.1 CDS Bmur_1021 NC_014150.1 1194880 1195146 R KEGG: bhy:BHWA1_01413 phosphocarrier protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr complement(1194880..1195146) Brachyspira murdochii DSM 12563 9142003 YP_003633317.1 CDS Bmur_1022 NC_014150.1 1195873 1196646 R KEGG: bhy:BHWA1_01412 pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; Baf family transcriptional acitvator complement(1195873..1196646) Brachyspira murdochii DSM 12563 9142004 YP_003633318.1 CDS Bmur_1023 NC_014150.1 1196654 1198048 R KEGG: bhy:BHWA1_01411 polyA polymerase; TIGRFAM: metal dependent phophohydrolase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; polynucleotide adenylyltransferase complement(1196654..1198048) Brachyspira murdochii DSM 12563 9142005 YP_003633319.1 CDS Bmur_1024 NC_014150.1 1198939 1199664 R KEGG: bhy:BHWA1_01899 hypothetical protein; hypothetical protein complement(1198939..1199664) Brachyspira murdochii DSM 12563 9142006 YP_003633320.1 CDS Bmur_1025 NC_014150.1 1200519 1203671 R PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_01438 acriflavin resistance protein; acriflavin resistance protein complement(1200519..1203671) Brachyspira murdochii DSM 12563 9142007 YP_003633321.1 CDS Bmur_1026 NC_014150.1 1203916 1207731 R KEGG: cbe:Cbei_0504 hypothetical protein; hypothetical protein complement(1203916..1207731) Brachyspira murdochii DSM 12563 9142008 YP_003633322.1 CDS Bmur_1027 NC_014150.1 1207751 1208809 R KEGG: bhy:BHWA1_01439 hypothetical protein; hypothetical protein complement(1207751..1208809) Brachyspira murdochii DSM 12563 9142009 YP_003633323.1 CDS Bmur_1028 NC_014150.1 1208948 1209340 D KEGG: bhy:BHWA1_01440 hypothetical protein; hypothetical protein 1208948..1209340 Brachyspira murdochii DSM 12563 9142010 YP_003633324.1 CDS Bmur_1029 NC_014150.1 1209429 1209875 D KEGG: bhy:BHWA1_01441 hypothetical protein; hypothetical protein 1209429..1209875 Brachyspira murdochii DSM 12563 9142011 YP_003633325.1 CDS Bmur_1030 NC_014150.1 1209892 1210443 D KEGG: bhy:BHWA1_01442 R polymerase sigma-70 factor 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1209892..1210443 Brachyspira murdochii DSM 12563 9142012 YP_003633326.1 CDS Bmur_1031 NC_014150.1 1210440 1210913 D KEGG: bhy:BHWA1_01443 hypothetical protein; hypothetical protein 1210440..1210913 Brachyspira murdochii DSM 12563 9142013 YP_003633327.1 CDS Bmur_1032 NC_014150.1 1210919 1211482 R KEGG: bhy:BHWA1_01444 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase complement(1210919..1211482) Brachyspira murdochii DSM 12563 9142014 YP_003633328.1 CDS Bmur_1033 NC_014150.1 1211470 1212483 R TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; KEGG: bhy:BHWA1_01445 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase complement(1211470..1212483) Brachyspira murdochii DSM 12563 9142015 YP_003633329.1 CDS Bmur_1034 NC_014150.1 1212724 1215048 R KEGG: bhy:BHWA1_01446 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; translation initiation factor IF-2 complement(1212724..1215048) Brachyspira murdochii DSM 12563 9142016 YP_003633330.1 CDS Bmur_1035 NC_014150.1 1215077 1215823 R KEGG: bhy:BHWA1_01447 hypothetical protein; hypothetical protein complement(1215077..1215823) Brachyspira murdochii DSM 12563 9142017 YP_003633331.1 CDS Bmur_1036 NC_014150.1 1215945 1217438 R KEGG: bhy:BHWA1_01448 hypothetical protein; hypothetical protein complement(1215945..1217438) Brachyspira murdochii DSM 12563 9142018 YP_003633332.1 CDS Bmur_1037 NC_014150.1 1217626 1218114 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bhy:BHWA1_01449 RNA methyltransferase; tRNA/rRNA methyltransferase SpoU 1217626..1218114 Brachyspira murdochii DSM 12563 9142019 YP_003633333.1 CDS Bmur_1038 NC_014150.1 1218247 1219524 R KEGG: cpe:CPE1368 hypothetical protein; hypothetical protein complement(1218247..1219524) Brachyspira murdochii DSM 12563 9142020 YP_003633334.1 CDS Bmur_1039 NC_014150.1 1220210 1221046 R PFAM: flagellin domain protein; KEGG: bhy:BHWA1_01452 periplasmic flagellar filament protein FlaB3; flagellin domain-containing protein complement(1220210..1221046) Brachyspira murdochii DSM 12563 9142021 YP_003633335.1 CDS Bmur_1040 NC_014150.1 1221340 1222302 D PFAM: peptidase M28; KEGG: bhy:BHWA1_01453 leucine aminopeptidase; peptidase M28 1221340..1222302 Brachyspira murdochii DSM 12563 9142022 YP_003633336.1 CDS Bmur_1041 NC_014150.1 1222381 1222890 R KEGG: bhy:BHWA1_01493 hypothetical protein; hypothetical protein complement(1222381..1222890) Brachyspira murdochii DSM 12563 9142023 YP_003633337.1 CDS Bmur_1042 NC_014150.1 1222989 1224335 R KEGG: bhy:BHWA1_01494 hypothetical protein; hypothetical protein complement(1222989..1224335) Brachyspira murdochii DSM 12563 9142024 YP_003633338.1 CDS Bmur_1043 NC_014150.1 1225562 1226656 D KEGG: bhy:BHWA1_01497 hypothetical protein; hypothetical protein 1225562..1226656 Brachyspira murdochii DSM 12563 9142026 YP_003633339.1 CDS Bmur_1044 NC_014150.1 1226688 1228370 D PFAM: protein of unknown function DUF115; KEGG: bhy:BHWA1_01498 hypothetical protein; hypothetical protein 1226688..1228370 Brachyspira murdochii DSM 12563 9142027 YP_003633340.1 CDS Bmur_1045 NC_014150.1 1228468 1229007 D KEGG: bhy:BHWA1_01499 hypothetical protein; hypothetical protein 1228468..1229007 Brachyspira murdochii DSM 12563 9142028 YP_003633341.1 CDS Bmur_1046 NC_014150.1 1229091 1229411 D KEGG: bhy:BHWA1_01525 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein 1229091..1229411 Brachyspira murdochii DSM 12563 9142029 YP_003633342.1 CDS Bmur_1047 NC_014150.1 1229635 1230372 D PFAM: peptidase M50; KEGG: bhy:BHWA1_01564 peptidase; peptidase M50 1229635..1230372 Brachyspira murdochii DSM 12563 9142030 YP_003633343.1 CDS Bmur_1048 NC_014150.1 1231053 1232003 D TIGRFAM: ornithine carbamoyltransferase; KEGG: bhy:BHWA1_01492 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 1231053..1232003 Brachyspira murdochii DSM 12563 9142031 YP_003633344.1 CDS Bmur_1049 NC_014150.1 1232082 1233305 D TIGRFAM: argininosuccinate synthase; KEGG: bhy:BHWA1_01491 argininosuccinate lyase; PFAM: argininosuccinate synthase; argininosuccinate synthase 1232082..1233305 Brachyspira murdochii DSM 12563 9142032 YP_003633345.1 CDS Bmur_1050 NC_014150.1 1233309 1234700 D KEGG: bhy:BHWA1_01490 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 1233309..1234700 Brachyspira murdochii DSM 12563 9142033 YP_003633346.1 CDS Bmur_1051 NC_014150.1 1234770 1235261 R KEGG: bhy:BHWA1_01573 hypothetical protein; hypothetical protein complement(1234770..1235261) Brachyspira murdochii DSM 12563 9142034 YP_003633347.1 CDS Bmur_1052 NC_014150.1 1235324 1235725 R KEGG: bhy:BHWA1_01572 hypothetical protein; hypothetical protein complement(1235324..1235725) Brachyspira murdochii DSM 12563 9142035 YP_003633348.1 CDS Bmur_1053 NC_014150.1 1236442 1237830 R KEGG: bhy:BHWA1_01952 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(1236442..1237830) Brachyspira murdochii DSM 12563 9142036 YP_003633349.1 CDS Bmur_1054 NC_014150.1 1238254 1238964 R PFAM: peptidase membrane zinc metallopeptidase KEGG: bhy:BHWA1_01454 Zn dependant metalloprotease; peptidase membrane zinc metallopeptidase complement(1238254..1238964) Brachyspira murdochii DSM 12563 9142037 YP_003633350.1 CDS Bmur_1055 NC_014150.1 1239578 1239997 D KEGG: bhy:BHWA1_01899 hypothetical protein; hypothetical protein 1239578..1239997 Brachyspira murdochii DSM 12563 9142038 YP_003633351.1 CDS Bmur_1056 NC_014150.1 1240167 1240292 D KEGG: fps:FP1515 hypothetical protein; hypothetical protein 1240167..1240292 Brachyspira murdochii DSM 12563 9142039 YP_003633352.1 CDS Bmur_1057 NC_014150.1 1240400 1241830 R PFAM: Na+/solute symporter; KEGG: Na+/solute symporter; Na+/solute symporter complement(1240400..1241830) Brachyspira murdochii DSM 12563 9142040 YP_003633353.1 CDS Bmur_1058 NC_014150.1 1241973 1243334 R KEGG: bhy:BHWA1_01322 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(1241973..1243334) Brachyspira murdochii DSM 12563 9142041 YP_003633354.1 CDS Bmur_1059 NC_014150.1 1243883 1244617 R PFAM: protein of unknown function DUF1112; KEGG: bhy:BHWA1_01327 hypothetical protein; hypothetical protein complement(1243883..1244617) Brachyspira murdochii DSM 12563 9142042 YP_003633355.1 CDS Bmur_1060 NC_014150.1 1244778 1245050 R KEGG: bhy:BHWA1_01328 hypothetical protein; hypothetical protein complement(1244778..1245050) Brachyspira murdochii DSM 12563 9142043 YP_003633356.1 CDS Bmur_1061 NC_014150.1 1245192 1245422 R KEGG: bhy:BHWA1_01329 hypothetical protein; hypothetical protein complement(1245192..1245422) Brachyspira murdochii DSM 12563 9142044 YP_003633357.1 CDS Bmur_1062 NC_014150.1 1249373 1251880 D KEGG: bhy:BHWA1_01331 hypothetical protein; hypothetical protein 1249373..1251880 Brachyspira murdochii DSM 12563 9142047 YP_003633358.1 CDS Bmur_1063 NC_014150.1 1252707 1253174 D PFAM: CheC domain protein; KEGG: bhy:BHWA1_01332 chemotaxis protein CheX; chemotaxis protein CheC 1252707..1253174 Brachyspira murdochii DSM 12563 9142048 YP_003633359.1 CDS Bmur_1065 NC_014150.1 1253633 1254448 D PFAM: MCP methyltransferase CheR-type; KEGG: bhy:BHWA1_01334 chemotaxis protein methyltransferase CheR; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 1253633..1254448 Brachyspira murdochii DSM 12563 9142050 YP_003633360.1 CDS Bmur_1066 NC_014150.1 1254460 1254867 D PFAM: protein of unknown function DUF583; KEGG: bhy:BHWA1_01335 hypothetical protein; hypothetical protein 1254460..1254867 Brachyspira murdochii DSM 12563 9142051 YP_003633361.1 CDS Bmur_1067 NC_014150.1 1255032 1255826 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_01336 TPR domain-containing protein; hypothetical protein 1255032..1255826 Brachyspira murdochii DSM 12563 9142052 YP_003633362.1 CDS Bmur_1068 NC_014150.1 1255832 1256857 D KEGG: bhy:BHWA1_01337 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 1255832..1256857 Brachyspira murdochii DSM 12563 9142053 YP_003633363.1 CDS Bmur_1069 NC_014150.1 1256976 1257791 D KEGG: bhy:BHWA1_01338 MreC, cell shape-determining protein; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 1256976..1257791 Brachyspira murdochii DSM 12563 9142054 YP_003633364.1 CDS Bmur_1070 NC_014150.1 1257791 1258333 D KEGG: bhy:BHWA1_01339 rod shape- determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; rod shape-determining protein MreD 1257791..1258333 Brachyspira murdochii DSM 12563 9142055 YP_003633365.1 CDS Bmur_1071 NC_014150.1 1258339 1258887 D PFAM: adenylate cyclase; KEGG: bhy:BHWA1_01340 CyaB, adenylate cyclase, class 2 (thermophilic); adenylate cyclase 1258339..1258887 Brachyspira murdochii DSM 12563 9142056 YP_003633366.1 CDS Bmur_1072 NC_014150.1 1259045 1260049 D KEGG: bhy:BHWA1_01341 hypothetical protein; hypothetical protein 1259045..1260049 Brachyspira murdochii DSM 12563 9142057 YP_003633367.1 CDS Bmur_1073 NC_014150.1 1260079 1260672 D KEGG: bhy:BHWA1_01342 hypothetical protein; hypothetical protein 1260079..1260672 Brachyspira murdochii DSM 12563 9142058 YP_003633368.1 CDS Bmur_1074 NC_014150.1 1260722 1261321 D KEGG: bhy:BHWA1_01343 hypothetical protein; hypothetical protein 1260722..1261321 Brachyspira murdochii DSM 12563 9142059 YP_003633369.1 CDS Bmur_1075 NC_014150.1 1261418 1262107 D KEGG: bhy:BHWA1_01344 hypothetical protein; hypothetical protein 1261418..1262107 Brachyspira murdochii DSM 12563 9142060 YP_003633370.1 CDS Bmur_1076 NC_014150.1 1262172 1264277 D SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: bhy:BHWA1_01345 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; ATP-dependent metalloprotease FtsH 1262172..1264277 Brachyspira murdochii DSM 12563 9142061 YP_003633371.1 CDS Bmur_1077 NC_014150.1 1264518 1265504 R PFAM: peptidase S58 DmpA; KEGG: bhy:BHWA1_01348 NylC-like family protein; peptidase S58 DmpA complement(1264518..1265504) Brachyspira murdochii DSM 12563 9142062 YP_003633372.1 CDS Bmur_1078 NC_014150.1 1265925 1266035 D hypothetical protein 1265925..1266035 Brachyspira murdochii DSM 12563 9142063 YP_003633373.1 CDS Bmur_1079 NC_014150.1 1266063 1267568 D PFAM: Na+/solute symporter; KEGG: ppr:PBPRA0991 hypothetical protein; Na+/solute symporter 1266063..1267568 Brachyspira murdochii DSM 12563 9142064 YP_003633374.1 CDS Bmur_1080 NC_014150.1 1268040 1269563 D TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: bhy:BHWA1_02089 predicted ATPase with chaperone activity; SMART: AAA ATPase; Mg chelatase subunit ChlI 1268040..1269563 Brachyspira murdochii DSM 12563 9142065 YP_003633375.1 CDS Bmur_1081 NC_014150.1 1269922 1271400 D PFAM: AAA-4 family protein; KEGG: bhy:BHWA1_02086 hypothetical protein; transcriptional regulator 1269922..1271400 Brachyspira murdochii DSM 12563 9142066 YP_003633376.1 CDS Bmur_1082 NC_014150.1 1271487 1272419 D TIGRFAM: thioredoxin reductase; KEGG: bhy:BHWA1_02087 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 1271487..1272419 Brachyspira murdochii DSM 12563 9142067 YP_003633377.1 CDS Bmur_1083 NC_014150.1 1272477 1273490 R PFAM: ATP:guanido phosphotransferase; KEGG: bhy:BHWA1_01575 guanido phosphotransferase; ATP:guanido phosphotransferase complement(1272477..1273490) Brachyspira murdochii DSM 12563 9142068 YP_003633378.1 CDS Bmur_1084 NC_014150.1 1273480 1274028 R KEGG: bhy:BHWA1_01576 UvrB/UvrC protein; hypothetical protein complement(1273480..1274028) Brachyspira murdochii DSM 12563 9142069 YP_003633379.1 CDS Bmur_1085 NC_014150.1 1274106 1274804 R PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: bhy:BHWA1_01577 2-C-methyl-D- erythritol 4-phosphate cytidylyltransferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase complement(1274106..1274804) Brachyspira murdochii DSM 12563 9142070 YP_003633380.1 CDS Bmur_1086 NC_014150.1 1274810 1276660 R KEGG: bhy:BHWA1_01578 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(1274810..1276660) Brachyspira murdochii DSM 12563 9142071 YP_003633381.1 CDS Bmur_1087 NC_014150.1 1276882 1279269 R PFAM: glycosyl transferase 51; penicillin- binding protein transpeptidase; KEGG: bhy:BHWA1_01579 penicillin binding protein; glycosyl transferase complement(1276882..1279269) Brachyspira murdochii DSM 12563 9142072 YP_003633382.1 CDS Bmur_1088 NC_014150.1 1280616 1281860 D PFAM: extracellular solute-binding protein family 1; KEGG: fma:FMG_0139 sugar ABC transporter substrate- binding protein; ABC transporter substrate-binding protein 1280616..1281860 Brachyspira murdochii DSM 12563 9142073 YP_003633383.1 CDS Bmur_1089 NC_014150.1 1282431 1283303 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fma:FMG_0140 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 1282431..1283303 Brachyspira murdochii DSM 12563 9142074 YP_003633384.1 CDS Bmur_1090 NC_014150.1 1283356 1284210 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fma:FMG_0141 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 1283356..1284210 Brachyspira murdochii DSM 12563 9142075 YP_003633385.1 CDS Bmur_1091 NC_014150.1 1284568 1285923 D KEGG: bhy:BHWA1_02047 signal recognition particle GTPase; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; GTP-binding signal recognition particle SRP54 G- domain-containing protein 1284568..1285923 Brachyspira murdochii DSM 12563 9142076 YP_003633386.1 CDS Bmur_1092 NC_014150.1 1285945 1286304 D KEGG: bhy:BHWA1_02048 hypothetical protein; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; 30S ribosomal protein S16 1285945..1286304 Brachyspira murdochii DSM 12563 9142077 YP_003633387.1 CDS Bmur_1093 NC_014150.1 1286337 1286579 D KEGG: bhy:BHWA1_02049 R-binding protein (contains KH domain); R-binding protein (contains KH domain) 1286337..1286579 Brachyspira murdochii DSM 12563 9142078 YP_003633388.1 CDS Bmur_1094 NC_014150.1 1286576 1287085 D KEGG: bhy:BHWA1_02050 RimM protein, required for 16S processing; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain protein; RimM protein; 16S rRNA-processing protein RimM 1286576..1287085 Brachyspira murdochii DSM 12563 9142079 YP_003633389.1 CDS Bmur_1095 NC_014150.1 1287110 1288120 R KEGG: bhy:BHWA1_02421 nicotinamide-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; cytidyltransferase complement(1287110..1288120) Brachyspira murdochii DSM 12563 9142080 YP_003633390.1 CDS Bmur_1096 NC_014150.1 1288155 1288847 R KEGG: bhy:BHWA1_02422 nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC complement(1288155..1288847) Brachyspira murdochii DSM 12563 9142081 YP_003633391.1 CDS Bmur_1097 NC_014150.1 1289044 1289715 D PFAM: protein of unknown function DUF305; KEGG: bhy:BHWA1_02051 hypothetical protein; hypothetical protein 1289044..1289715 Brachyspira murdochii DSM 12563 9142082 YP_003633392.1 CDS Bmur_1098 NC_014150.1 1289855 1290940 R PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_01618 alcohol dehydrogenase; molecular chaperone GroES complement(1289855..1290940) Brachyspira murdochii DSM 12563 9142083 YP_003633393.1 CDS Bmur_1099 NC_014150.1 1291470 1291895 R PFAM: heat shock protein Hsp20; KEGG: bhy:BHWA1_02065 molecular chaperone, IbpA (small heat shock protein); heat shock protein Hsp20 complement(1291470..1291895) Brachyspira murdochii DSM 12563 9142084 YP_003633394.1 CDS Bmur_1100 NC_014150.1 1292371 1292793 R PFAM: heat shock protein Hsp20; KEGG: bhy:BHWA1_02064 heat shock protein HSP20; heat shock protein Hsp20 complement(1292371..1292793) Brachyspira murdochii DSM 12563 9142085 YP_003633395.1 CDS Bmur_1101 NC_014150.1 1293152 1294204 R KEGG: bhy:BHWA1_01640 hypothetical protein; hypothetical protein complement(1293152..1294204) Brachyspira murdochii DSM 12563 9142086 YP_003633396.1 CDS Bmur_1102 NC_014150.1 1294358 1295203 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bhy:BHWA1_01641 ATPase, associated with various cellular activities; ATPase AAA 1294358..1295203 Brachyspira murdochii DSM 12563 9142087 YP_003633397.1 CDS Bmur_1103 NC_014150.1 1295355 1296176 R KEGG: bhy:BHWA1_02152 hypothetical protein; hypothetical protein complement(1295355..1296176) Brachyspira murdochii DSM 12563 9142088 YP_003633398.1 CDS Bmur_1104 NC_014150.1 1296173 1297303 R TIGRFAM: lipid-A-disaccharide synthase; KEGG: bhy:BHWA1_02153 lipid A disaccharide synthase; LpxB; PFAM: glycosyl transferase 19; lipid-A-disaccharide synthase complement(1296173..1297303) Brachyspira murdochii DSM 12563 9142089 YP_003633399.1 CDS Bmur_1105 NC_014150.1 1297331 1298125 R KEGG: bhy:BHWA1_02154 UDP-N-acetylglucosamine acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylglu cosamineO-acyltransferase; acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase complement(1297331..1298125) Brachyspira murdochii DSM 12563 9142090 YP_003633400.1 CDS Bmur_1106 NC_014150.1 1298141 1298605 R KEGG: bhy:BHWA1_02155 (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ complement(1298141..1298605) Brachyspira murdochii DSM 12563 9142091 YP_003633401.1 CDS Bmur_1107 NC_014150.1 1298758 1299948 R PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_02161 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1298758..1299948) Brachyspira murdochii DSM 12563 9142092 YP_003633402.1 CDS Bmur_1108 NC_014150.1 1300366 1301061 R KEGG: bhy:BHWA1_01538 jag protein; PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein complement(1300366..1301061) Brachyspira murdochii DSM 12563 9142093 YP_003633403.1 CDS Bmur_1109 NC_014150.1 1301127 1303007 R KEGG: bhy:BHWA1_01539 inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein; insertase complement(1301127..1303007) Brachyspira murdochii DSM 12563 9142094 YP_003633404.1 CDS Bmur_1110 NC_014150.1 1303098 1303307 R PFAM: protein of unknown function DUF37; KEGG: bhy:BHWA1_01540 hypothetical protein; hypothetical protein complement(1303098..1303307) Brachyspira murdochii DSM 12563 9142095 YP_003633405.1 CDS Bmur_1111 NC_014150.1 1303718 1303861 R KEGG: tpp:TPASS_0951 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; 50S ribosomal protein L34 complement(1303718..1303861) Brachyspira murdochii DSM 12563 9142096 YP_003633406.1 CDS Bmur_1112 NC_014150.1 1304058 1304540 D KEGG: bhy:BHWA1_01542 response regulator; anti-sigma regulatory factor, serine/threonine protein kinase 1304058..1304540 Brachyspira murdochii DSM 12563 9142097 YP_003633407.1 CDS Bmur_1113 NC_014150.1 1304573 1306132 D KEGG: bhy:BHWA1_01543 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; NUDIX hydrolase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase 1304573..1306132 Brachyspira murdochii DSM 12563 9142098 YP_003633408.1 CDS Bmur_1114 NC_014150.1 1306270 1307202 R KEGG: bhy:BHWA1_01653 hypothetical protein; hypothetical protein complement(1306270..1307202) Brachyspira murdochii DSM 12563 9142099 YP_003633409.1 CDS Bmur_1115 NC_014150.1 1307562 1307852 R KEGG: bhy:BHWA1_01481 hypothetical protein; hypothetical protein complement(1307562..1307852) Brachyspira murdochii DSM 12563 9142100 YP_003633410.1 CDS Bmur_1116 NC_014150.1 1307852 1308637 R KEGG: bhy:BHWA1_01480 hypothetical protein; hypothetical protein complement(1307852..1308637) Brachyspira murdochii DSM 12563 9142101 YP_003633411.1 CDS Bmur_1117 NC_014150.1 1308649 1309329 R PFAM: PBS lyase HEAT domain protein repeat- containing protein; HEAT domain containing protein; KEGG: bhy:BHWA1_01479 hypothetical protein; PBS lyase HEAT domain-containing protein repeat-containing protein complement(1308649..1309329) Brachyspira murdochii DSM 12563 9142102 YP_003633412.1 CDS Bmur_1118 NC_014150.1 1309320 1311893 R SMART: Threonyl/alanyl tRNA synthetase SAD; TIGRFAM: alanyl-tRNA synthetase; KEGG: bhy:BHWA1_01478 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; alanyl-tRNA synthetase complement(1309320..1311893) Brachyspira murdochii DSM 12563 9142103 YP_003633413.1 CDS Bmur_1119 NC_014150.1 1312099 1313610 R SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bhy:BHWA1_01477 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(1312099..1313610) Brachyspira murdochii DSM 12563 9142104 YP_003633414.1 CDS Bmur_1120 NC_014150.1 1313841 1314773 R PFAM: lipid A biosynthesis acyltransferase; KEGG: bhy:BHWA1_01476 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(1313841..1314773) Brachyspira murdochii DSM 12563 9142105 YP_003633415.1 CDS Bmur_1121 NC_014150.1 1314777 1316765 R KEGG: bhy:BHWA1_01475 hypothetical protein; hypothetical protein complement(1314777..1316765) Brachyspira murdochii DSM 12563 9142106 YP_003633416.1 CDS Bmur_1122 NC_014150.1 1316813 1317589 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bhy:BHWA1_01474 short chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1316813..1317589) Brachyspira murdochii DSM 12563 9142107 YP_003633417.1 CDS Bmur_1123 NC_014150.1 1317771 1318271 R PFAM: protein of unknown function DUF400; KEGG: bhy:BHWA1_01473 hypothetical protein; hypothetical protein complement(1317771..1318271) Brachyspira murdochii DSM 12563 9142108 YP_003633418.1 CDS Bmur_1124 NC_014150.1 1318480 1318974 R PFAM: protein of unknown function DUF400; KEGG: bhy:BHWA1_01472 hypothetical protein; hypothetical protein complement(1318480..1318974) Brachyspira murdochii DSM 12563 9142109 YP_003633419.1 CDS Bmur_1125 NC_014150.1 1319127 1320602 D KEGG: bhy:BHWA1_01471 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; leucyl aminopeptidase 1319127..1320602 Brachyspira murdochii DSM 12563 9142110 YP_003633420.1 CDS Bmur_1126 NC_014150.1 1320717 1321313 R KEGG: mma:MM_1673 galactoside-O-acetyltransferase; galactoside-O-acetyltransferase complement(1320717..1321313) Brachyspira murdochii DSM 12563 9142111 YP_003633421.1 CDS Bmur_1127 NC_014150.1 1321621 1321890 D KEGG: bhy:BHWA1_01470 TRX Fd NuoE, TRX-like [2Fe- 2S] ferredoxin (Fd) family, DH:ubiquinone oxidoreductase (Nuo) subunit E subfamily; thioredoxin 1321621..1321890 Brachyspira murdochii DSM 12563 9142112 YP_003633422.1 CDS Bmur_1128 NC_014150.1 1321887 1323047 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: bhy:BHWA1_01469 DH dehydrogenase; respiratory-chain NADH dehydrogenase domain 51 kDa subunit 1321887..1323047 Brachyspira murdochii DSM 12563 9142113 YP_003633423.1 CDS Bmur_1129 NC_014150.1 1323072 1324439 D KEGG: bhy:BHWA1_01468 ferrodoxin; ferrodoxin 1323072..1324439 Brachyspira murdochii DSM 12563 9142114 YP_003633424.1 CDS Bmur_1130 NC_014150.1 1324519 1326069 D PFAM: FAD dependent oxidoreductase; KEGG: bhy:BHWA1_01467 glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase 1324519..1326069 Brachyspira murdochii DSM 12563 9142115 YP_003633425.1 CDS Bmur_1131 NC_014150.1 1326547 1327443 D KEGG: bhy:BHWA1_00126 hypothetical protein; hypothetical protein 1326547..1327443 Brachyspira murdochii DSM 12563 9142116 YP_003633426.1 CDS Bmur_1132 NC_014150.1 1327543 1328166 R KEGG: bhy:BHWA1_01466 HisH, glutamine amidotransferase; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(1327543..1328166) Brachyspira murdochii DSM 12563 9142117 YP_003633427.1 CDS Bmur_1133 NC_014150.1 1328249 1328848 R KEGG: bhy:BHWA1_01465 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase complement(1328249..1328848) Brachyspira murdochii DSM 12563 9142118 YP_003633428.1 CDS Bmur_1134 NC_014150.1 1328954 1329346 D KEGG: bhy:BHWA1_01464 hypothetical protein; hypothetical protein 1328954..1329346 Brachyspira murdochii DSM 12563 9142119 YP_003633429.1 CDS Bmur_1135 NC_014150.1 1329444 1330568 R TIGRFAM: glycerate kinase; KEGG: bhy:BHWA1_01463 glycerate kinase; PFAM: glycerate kinase; glycerate kinase complement(1329444..1330568) Brachyspira murdochii DSM 12563 9142120 YP_003633430.1 CDS Bmur_1136 NC_014150.1 1330614 1331777 R PFAM: sugar diacid recognition domain protein; KEGG: msu:MS0694 carbohydrate diacid transcriptional activator CdaR; CdaR family transcriptional regulator complement(1330614..1331777) Brachyspira murdochii DSM 12563 9142121 YP_003633431.1 CDS Bmur_1137 NC_014150.1 1332050 1333390 D PFAM: gluconate transporter; KEGG: pmo:Pmob_0535 gluconate transporter; gluconate transporter 1332050..1333390 Brachyspira murdochii DSM 12563 9142122 YP_003633432.1 CDS Bmur_1138 NC_014150.1 1333406 1334236 D KEGG: ckr:CKR_2525 hypothetical protein; hypothetical protein 1333406..1334236 Brachyspira murdochii DSM 12563 9142123 YP_003633433.1 CDS Bmur_1139 NC_014150.1 1334395 1335552 D TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_00811 AbgB, metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1334395..1335552 Brachyspira murdochii DSM 12563 9142124 YP_003633434.1 CDS Bmur_1140 NC_014150.1 1335579 1337396 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_01628 TPR domain-containing protein; hypothetical protein complement(1335579..1337396) Brachyspira murdochii DSM 12563 9142125 YP_003633435.1 CDS Bmur_1141 NC_014150.1 1337854 1339305 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; KEGG: bhy:BHWA1_01682 glutamyl-tRNA(Gln) amidotransferase, B subunit; SMART: Asn/Gln amidotransferase; glutamyl-tRNA(Gln) amidotransferase subunit B 1337854..1339305 Brachyspira murdochii DSM 12563 9142126 YP_003633436.1 CDS Bmur_1142 NC_014150.1 1339408 1340694 R PFAM: amine oxidase; KEGG: ypb:YPTS_1046 O-antigen synthesis protein WbyH; amine oxidase complement(1339408..1340694) Brachyspira murdochii DSM 12563 9142127 YP_003633437.1 CDS Bmur_1143 NC_014150.1 1340687 1341625 R PFAM: glycosyl transferase 2; KEGG: cyh:Cyan8802_2789 glycosyl transferase 2; glycosyl transferase complement(1340687..1341625) Brachyspira murdochii DSM 12563 9142128 YP_003633438.1 CDS Bmur_1144 NC_014150.1 1341649 1342737 R PFAM: glycosyl transferase 2; KEGG: mar:MAE_10940 glycosyl transferase; glycosyl transferase complement(1341649..1342737) Brachyspira murdochii DSM 12563 9142129 YP_003633439.1 CDS Bmur_1145 NC_014150.1 1342734 1343612 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bhy:BHWA1_02680 NAD dependent epimerase/dehydratase superfamily protein; NAD-dependent epimerase/dehydratase complement(1342734..1343612) Brachyspira murdochii DSM 12563 9142130 YP_003633440.1 CDS Bmur_1146 NC_014150.1 1343623 1344156 R KEGG: bhy:BHWA1_02681 dTDP-4-dehydrorhamnose 3,5- epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1343623..1344156) Brachyspira murdochii DSM 12563 9142131 YP_003633441.1 CDS Bmur_1147 NC_014150.1 1344239 1345135 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bhy:BHWA1_02680 NAD dependent epimerase/dehydratase superfamily protein; NAD-dependent epimerase/dehydratase complement(1344239..1345135) Brachyspira murdochii DSM 12563 9142132 YP_003633442.1 CDS Bmur_1148 NC_014150.1 1345288 1347015 R KEGG: bhy:BHWA1_01686 hypothetical protein; hypothetical protein complement(1345288..1347015) Brachyspira murdochii DSM 12563 9142133 YP_003633443.1 CDS Bmur_1150 NC_014150.1 1348379 1349749 R KEGG: bhy:BHWA1_01969 phage terminase large subunit; TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; protein of unknown function DUF1545; phage terminase, large subunit, PBSX family complement(1348379..1349749) Brachyspira murdochii DSM 12563 9142135 YP_003633444.1 CDS Bmur_1151 NC_014150.1 1349886 1350260 D KEGG: bhy:BHWA1_01991 hypothetical protein; hypothetical protein 1349886..1350260 Brachyspira murdochii DSM 12563 9142136 YP_003633445.1 CDS Bmur_1152 NC_014150.1 1350642 1352666 D KEGG: bhy:BHWA1_01983 hypothetical protein; hypothetical protein 1350642..1352666 Brachyspira murdochii DSM 12563 9142137 YP_003633446.1 CDS Bmur_1153 NC_014150.1 1352733 1353518 D KEGG: bhy:BHWA1_00028 hypothetical protein; hypothetical protein 1352733..1353518 Brachyspira murdochii DSM 12563 9142138 YP_003633447.1 CDS Bmur_1154 NC_014150.1 1353604 1354104 R KEGG: ape:APE_0319 protease I; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; Pfpi family intracellular protease complement(1353604..1354104) Brachyspira murdochii DSM 12563 9142139 YP_003633448.1 CDS Bmur_1155 NC_014150.1 1354186 1354656 R KEGG: bhy:BHWA1_01990 hypothetical protein; hypothetical protein complement(1354186..1354656) Brachyspira murdochii DSM 12563 9142140 YP_003633449.1 CDS Bmur_1156 NC_014150.1 1354733 1356877 D KEGG: bhy:BHWA1_01979 hypothetical protein; hypothetical protein 1354733..1356877 Brachyspira murdochii DSM 12563 9142141 YP_003633450.1 CDS Bmur_1157 NC_014150.1 1357069 1357752 D KEGG: bhy:BHWA1_01984 transcriptional regulator, MerR family; MerR family transcriptional regulator 1357069..1357752 Brachyspira murdochii DSM 12563 9142142 YP_003633451.1 CDS Bmur_1158 NC_014150.1 1357806 1357970 D KEGG: vfm:VFMJ11_1559 hypothetical protein; hypothetical protein 1357806..1357970 Brachyspira murdochii DSM 12563 9142143 YP_003633452.1 CDS Bmur_1159 NC_014150.1 1358007 1358150 D KEGG: vfm:VFMJ11_1559 hypothetical protein; hypothetical protein 1358007..1358150 Brachyspira murdochii DSM 12563 9142144 YP_003633453.1 CDS Bmur_1160 NC_014150.1 1358331 1358639 D KEGG: bhy:BHWA1_01985 hypothetical protein; hypothetical protein 1358331..1358639 Brachyspira murdochii DSM 12563 9142145 YP_003633454.1 CDS Bmur_1161 NC_014150.1 1358760 1359077 D KEGG: pme:NATL1_02361 hypothetical protein; hypothetical protein 1358760..1359077 Brachyspira murdochii DSM 12563 9142146 YP_003633455.1 CDS Bmur_1162 NC_014150.1 1359218 1359586 D KEGG: bhy:BHWA1_01991 hypothetical protein; hypothetical protein 1359218..1359586 Brachyspira murdochii DSM 12563 9142147 YP_003633456.1 CDS Bmur_1163 NC_014150.1 1359669 1360250 D PFAM: chromate transporter; KEGG: bhy:BHWA1_01706 chromate transport protein; chromate transporter 1359669..1360250 Brachyspira murdochii DSM 12563 9142148 YP_003633457.1 CDS Bmur_1164 NC_014150.1 1360265 1360843 D PFAM: chromate transporter; KEGG: bhy:BHWA1_01707 chromate transport protein; chromate transporter 1360265..1360843 Brachyspira murdochii DSM 12563 9142149 YP_003633458.1 CDS Bmur_1165 NC_014150.1 1360856 1361284 R KEGG: bhy:BHWA1_01796 hypothetical protein; hypothetical protein complement(1360856..1361284) Brachyspira murdochii DSM 12563 9142150 YP_003633459.1 CDS Bmur_1166 NC_014150.1 1361302 1361925 R PFAM: regulatory protein RecX; KEGG: bhy:BHWA1_01873 recombination regulator RecX; regulatory protein RecX complement(1361302..1361925) Brachyspira murdochii DSM 12563 9142151 YP_003633460.1 CDS Bmur_1167 NC_014150.1 1361964 1362482 R KEGG: bhy:BHWA1_01874 hypothetical protein; hypothetical protein complement(1361964..1362482) Brachyspira murdochii DSM 12563 9142152 YP_003633461.1 CDS Bmur_1168 NC_014150.1 1363088 1364074 D PFAM: peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase; KEGG: bhy:BHWA1_01184 predicted choloylglycine hydrolase; peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase 1363088..1364074 Brachyspira murdochii DSM 12563 9142153 YP_003633462.1 CDS Bmur_1169 NC_014150.1 1364087 1364548 R KEGG: bhy:BHWA1_02388 TPR domain-containing protein; hypothetical protein complement(1364087..1364548) Brachyspira murdochii DSM 12563 9142154 YP_003633463.1 CDS Bmur_1170 NC_014150.1 1364632 1365057 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_01764 hypothetical protein; hypothetical protein complement(1364632..1365057) Brachyspira murdochii DSM 12563 9142155 YP_003633464.1 CDS Bmur_1171 NC_014150.1 1365213 1365755 D KEGG: bhy:BHWA1_01782 hypothetical protein; hypothetical protein 1365213..1365755 Brachyspira murdochii DSM 12563 9142156 YP_003633465.1 CDS Bmur_1172 NC_014150.1 1365752 1366174 D KEGG: bhy:BHWA1_01781 hypothetical protein; hypothetical protein 1365752..1366174 Brachyspira murdochii DSM 12563 9142157 YP_003633466.1 CDS Bmur_1173 NC_014150.1 1366171 1367052 R PFAM: protein of unknown function DUF125 transmembrane; KEGG: bhy:BHWA1_01780 ferritin CCC1 C, ferritin CCC1 like C; hypothetical protein complement(1366171..1367052) Brachyspira murdochii DSM 12563 9142158 YP_003633467.1 CDS Bmur_1174 NC_014150.1 1367131 1367808 R KEGG: bhy:BHWA1_01797 HAD-super family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(1367131..1367808) Brachyspira murdochii DSM 12563 9142159 YP_003633468.1 CDS Bmur_1175 NC_014150.1 1367973 1369535 R SMART: AAA ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; KEGG: bhy:BHWA1_01921 DNA polymerase III, gamma and tau subunits; PFAM: ATPase AAA; DNA polymerase III subunits gamma and tau complement(1367973..1369535) Brachyspira murdochii DSM 12563 9142160 YP_003633469.1 CDS Bmur_1176 NC_014150.1 1369617 1370210 R PFAM: protein of unknown function DUF1349; KEGG: cbk:CLL_A1994 hypothetical protein; hypothetical protein complement(1369617..1370210) Brachyspira murdochii DSM 12563 9142161 YP_003633470.1 CDS Bmur_1177 NC_014150.1 1370413 1370829 D KEGG: conserved hypothetical protein; hypothetical protein 1370413..1370829 Brachyspira murdochii DSM 12563 9142162 YP_003633471.1 CDS Bmur_1178 NC_014150.1 1370963 1371907 R KEGG: bhy:BHWA1_01653 hypothetical protein; hypothetical protein complement(1370963..1371907) Brachyspira murdochii DSM 12563 9142163 YP_003633472.1 CDS Bmur_1179 NC_014150.1 1372157 1373347 R KEGG: bhy:BHWA1_01664 hypothetical protein; hypothetical protein complement(1372157..1373347) Brachyspira murdochii DSM 12563 9142164 YP_003633473.1 CDS Bmur_1180 NC_014150.1 1373418 1374485 D KEGG: bhy:BHWA1_01663 hypothetical protein; hypothetical protein 1373418..1374485 Brachyspira murdochii DSM 12563 9142165 YP_003633474.1 CDS Bmur_1181 NC_014150.1 1374509 1374832 D KEGG: bhy:BHWA1_01662 hypothetical protein; hypothetical protein 1374509..1374832 Brachyspira murdochii DSM 12563 9142166 YP_003633475.1 CDS Bmur_1182 NC_014150.1 1374940 1376784 R KEGG: bhy:BHWA1_01657 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(1374940..1376784) Brachyspira murdochii DSM 12563 9142167 YP_003633476.1 CDS Bmur_1183 NC_014150.1 1377260 1377652 R KEGG: bhy:BHWA1_01736 hypothetical protein; hypothetical protein complement(1377260..1377652) Brachyspira murdochii DSM 12563 9142168 YP_003633477.1 CDS Bmur_1184 NC_014150.1 1378237 1378707 D TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: bhy:BHWA1_02030 riboflavin synthase, beta subunit; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 1378237..1378707 Brachyspira murdochii DSM 12563 9142169 YP_003633478.1 CDS Bmur_1185 NC_014150.1 1378899 1379393 D PFAM: Rubrerythrin; KEGG: bhy:BHWA1_02019 rubrerythrin; rubrerythrin 1378899..1379393 Brachyspira murdochii DSM 12563 9142170 YP_003633479.1 CDS Bmur_1186 NC_014150.1 1379671 1380168 R KEGG: bhy:BHWA1_01816 hypothetical hypothetical protein; hypothetical protein complement(1379671..1380168) Brachyspira murdochii DSM 12563 9142171 YP_003633480.1 CDS Bmur_1187 NC_014150.1 1380210 1380746 R KEGG: bhy:BHWA1_01815 hypothetical protein; hypothetical protein complement(1380210..1380746) Brachyspira murdochii DSM 12563 9142172 YP_003633481.1 CDS Bmur_1188 NC_014150.1 1380788 1380991 R KEGG: bhy:BHWA1_01814 hypothetical protein; hypothetical protein complement(1380788..1380991) Brachyspira murdochii DSM 12563 9142173 YP_003633482.1 CDS Bmur_1189 NC_014150.1 1381270 1381506 D KEGG: bhy:BHWA1_01762 hypothetical protein; hypothetical protein 1381270..1381506 Brachyspira murdochii DSM 12563 9142174 YP_003633483.1 CDS Bmur_1190 NC_014150.1 1381579 1382922 R PFAM: protein of unknown function DUF107; KEGG: bhy:BHWA1_01763 NfeD, membrane-bound serine protease (ClpP class); hypothetical protein complement(1381579..1382922) Brachyspira murdochii DSM 12563 9142175 YP_003633484.1 CDS Bmur_1191 NC_014150.1 1383732 1384154 R KEGG: bhy:BHWA1_01482 C GCAxxG C C, redox- active protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein complement(1383732..1384154) Brachyspira murdochii DSM 12563 9142176 YP_003633485.1 CDS Bmur_1192 NC_014150.1 1384200 1385174 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: bhy:BHWA1_01483 3-oxoacyl-(acyl-carrier- protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; 3-oxoacyl-ACP synthase complement(1384200..1385174) Brachyspira murdochii DSM 12563 9142177 YP_003633486.1 CDS Bmur_1193 NC_014150.1 1385224 1385850 R KEGG: bhy:BHWA1_01484 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; hypothetical protein complement(1385224..1385850) Brachyspira murdochii DSM 12563 9142178 YP_003633487.1 CDS Bmur_1194 NC_014150.1 1386003 1387148 D KEGG: bhy:BHWA1_01922 pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1386003..1387148 Brachyspira murdochii DSM 12563 9142179 YP_003633488.1 CDS Bmur_1195 NC_014150.1 1387202 1387816 R KEGG: bhy:BHWA1_01923 leucine rich repeat protein; leucine rich repeat protein complement(1387202..1387816) Brachyspira murdochii DSM 12563 9142180 YP_003633489.1 CDS Bmur_1196 NC_014150.1 1387910 1388833 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bhy:BHWA1_01924 pseudouridylate synthase; SMART: RNA-binding S4 domain protein; pseudouridine synthase complement(1387910..1388833) Brachyspira murdochii DSM 12563 9142181 YP_003633490.1 CDS Bmur_1197 NC_014150.1 1388851 1389405 R KEGG: bhy:BHWA1_01925 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase complement(1388851..1389405) Brachyspira murdochii DSM 12563 9142182 YP_003633491.1 CDS Bmur_1198 NC_014150.1 1389661 1390668 D KEGG: bhy:BHWA1_01926 ADP-heptose synthase; TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; rfaE bifunctional protein 1389661..1390668 Brachyspira murdochii DSM 12563 9142183 YP_003633492.1 CDS Bmur_1199 NC_014150.1 1390707 1391840 D KEGG: bhy:BHWA1_01927 hypothetical protein; hypothetical protein 1390707..1391840 Brachyspira murdochii DSM 12563 9142184 YP_003633493.1 CDS Bmur_1200 NC_014150.1 1391994 1393388 R PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_01940 sodium dicarboxylate symporter family; sodium:dicarboxylate symporter complement(1391994..1393388) Brachyspira murdochii DSM 12563 9142185 YP_003633494.1 CDS Bmur_1201 NC_014150.1 1393732 1394907 R PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_01833 Na+/H+ dicarboxylate symporte; sodium:dicarboxylate symporter complement(1393732..1394907) Brachyspira murdochii DSM 12563 9142186 YP_003633495.1 CDS Bmur_1202 NC_014150.1 1395007 1396110 R PFAM: peptidase M23; KEGG: bhy:BHWA1_01724 peptidase; peptidase M23 complement(1395007..1396110) Brachyspira murdochii DSM 12563 9142187 YP_003633496.1 CDS Bmur_1203 NC_014150.1 1396188 1397225 R TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase RuvB domain; ATPase AAA; KEGG: bhy:BHWA1_01723 Holliday junction DNA helicase B; SMART: AAA ATPase; Holliday junction DNA helicase RuvB complement(1396188..1397225) Brachyspira murdochii DSM 12563 9142188 YP_003633497.1 CDS Bmur_1204 NC_014150.1 1397551 1398936 R KEGG: bhy:BHWA1_01739 multidrug efflux pump VmrA; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(1397551..1398936) Brachyspira murdochii DSM 12563 9142189 YP_003633498.1 CDS Bmur_1205 NC_014150.1 1399755 1401416 R PFAM: AMP-dependent synthetase and ligase; KEGG: bhy:BHWA1_01869 acyl-CoA synthetase; AMP-dependent synthetase/ligase complement(1399755..1401416) Brachyspira murdochii DSM 12563 9142190 YP_003633499.1 CDS Bmur_1206 NC_014150.1 1401456 1402127 R PFAM: Hly-III family protein; KEGG: bhy:BHWA1_01870 channel protein, hemolysin III family protein; Hly-III family protein complement(1401456..1402127) Brachyspira murdochii DSM 12563 9142191 YP_003633500.1 CDS Bmur_1207 NC_014150.1 1402761 1403612 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_01779 membrane protein, transporter; hypothetical protein 1402761..1403612 Brachyspira murdochii DSM 12563 9142192 YP_003633501.1 CDS Bmur_1208 NC_014150.1 1403817 1404785 D TIGRFAM: D-alanine/D-alanine ligase; KEGG: bhy:BHWA1_01871 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1403817..1404785 Brachyspira murdochii DSM 12563 9142193 YP_003633502.1 CDS Bmur_1209 NC_014150.1 1404803 1406419 R KEGG: bhy:BHWA1_01725 hypothetical protein; hypothetical protein complement(1404803..1406419) Brachyspira murdochii DSM 12563 9142194 YP_003633503.1 CDS Bmur_1210 NC_014150.1 1406954 1407919 R SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: bhy:BHWA1_02007 D-arabinose-5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein complement(1406954..1407919) Brachyspira murdochii DSM 12563 9142195 YP_003633504.1 CDS Bmur_1211 NC_014150.1 1407940 1408068 R KEGG: bhy:BHWA1_02006 hypothetical protein; hypothetical protein complement(1407940..1408068) Brachyspira murdochii DSM 12563 9142196 YP_003633505.1 CDS Bmur_1212 NC_014150.1 1408078 1408443 R PFAM: protein of unknown function UPF0102; KEGG: bhy:BHWA1_02005 predicted endonuclease; hypothetical protein complement(1408078..1408443) Brachyspira murdochii DSM 12563 9142197 YP_003633506.1 CDS Bmur_1213 NC_014150.1 1408453 1409688 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bhy:BHWA1_02004 HD-GYP domain containing protein; metal dependent phosphohydrolase complement(1408453..1409688) Brachyspira murdochii DSM 12563 9142198 YP_003633507.1 CDS Bmur_1214 NC_014150.1 1409693 1409956 R PFAM: type III secretion exporter; KEGG: bhy:BHWA1_02003 flagellar biosynthesis protein FlhB; type III secretion exporter complement(1409693..1409956) Brachyspira murdochii DSM 12563 9142199 YP_003633508.1 CDS Bmur_1215 NC_014150.1 1409946 1411028 R KEGG: bhy:BHWA1_02002 hypothetical protein; hypothetical protein complement(1409946..1411028) Brachyspira murdochii DSM 12563 9142200 YP_003633509.1 CDS Bmur_1216 NC_014150.1 1411158 1412888 R TIGRFAM: adenine deaminase; KEGG: bhy:BHWA1_01698 adenine deaminase; PFAM: amidohydrolase; adenine deaminase complement(1411158..1412888) Brachyspira murdochii DSM 12563 9142201 YP_003633510.1 CDS Bmur_1217 NC_014150.1 1413226 1413849 D KEGG: bhy:BHWA1_01630 hypothetical protein; hypothetical protein 1413226..1413849 Brachyspira murdochii DSM 12563 9142202 YP_003633511.1 CDS Bmur_1218 NC_014150.1 1413936 1414190 D PFAM: protein of unknown function DUF167; KEGG: bhy:BHWA1_01632 hypothetical protein; hypothetical protein 1413936..1414190 Brachyspira murdochii DSM 12563 9142203 YP_003633512.1 CDS Bmur_1219 NC_014150.1 1414308 1415174 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_01598 RarD, predicted permease; hypothetical protein 1414308..1415174 Brachyspira murdochii DSM 12563 9142204 YP_003633513.1 CDS Bmur_1220 NC_014150.1 1415215 1416312 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bhy:BHWA1_01599 ATPase, associated with various cellular activities, AAA 5; ATPase AAA 1415215..1416312 Brachyspira murdochii DSM 12563 9142205 YP_003633514.1 CDS Bmur_1221 NC_014150.1 1416532 1417359 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01810 ferredoxin; 4Fe-4S ferredoxin 1416532..1417359 Brachyspira murdochii DSM 12563 9142206 YP_003633515.1 CDS Bmur_1222 NC_014150.1 1417559 1418212 R PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: bhy:BHWA1_01809 formamidopyrimidine-D glycolase; DNA glycosylase/AP lyase complement(1417559..1418212) Brachyspira murdochii DSM 12563 9142207 YP_003633516.1 CDS Bmur_1223 NC_014150.1 1418334 1419272 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bhy:BHWA1_01744 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1418334..1419272) Brachyspira murdochii DSM 12563 9142208 YP_003633517.1 CDS Bmur_1224 NC_014150.1 1419576 1420334 D TIGRFAM: CRISPR-associated protein Cas6; KEGG: dae:Dtox_0913 CRISPR-associated protein Cas6; CRISPR-associated protein Cas6 1419576..1420334 Brachyspira murdochii DSM 12563 9142209 YP_003633518.1 CDS Bmur_1225 NC_014150.1 1420351 1422111 D PFAM: CRISPR-associated protein, CXXC-CXXC region; KEGG: lba:Lebu_0799 CRISPR-associated Cst1 family protein; CRISPR-associated protein 1420351..1422111 Brachyspira murdochii DSM 12563 9142210 YP_003633519.1 CDS Bmur_1226 NC_014150.1 1422135 1423028 D TIGRFAM: CRISPR-associated regulatory protein, DevR family; CRISPR-associated autoregulator DevR family; KEGG: lmh:LMHCC_2119 crispr-associated regulatory protein, DevR family; DevR family CRISPR-associated autoregulator 1422135..1423028 Brachyspira murdochii DSM 12563 9142211 YP_003633520.1 CDS Bmur_1227 NC_014150.1 1423021 1423761 D KEGG: lba:Lebu_0797 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522; CRISPR-associated protein Cas5 1423021..1423761 Brachyspira murdochii DSM 12563 9142212 YP_003633521.1 CDS Bmur_1228 NC_014150.1 1423758 1426052 D TIGRFAM: CRISPR-associated helicase Cas3; CRISPR- associated HD domain protein; PFAM: DEAD/DEAH box helicase domain protein; KEGG: amt:Amet_2193 metal dependent phosphohydrolase; SMART: DEAD-like helicase; CRISPR-associated helicase Cas3 1423758..1426052 Brachyspira murdochii DSM 12563 9142213 YP_003633522.1 CDS Bmur_1229 NC_014150.1 1426060 1426563 D KEGG: dae:Dtox_0918 CRISPR-associated protein Cas4; TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; CRISPR-associated protein Cas4 1426060..1426563 Brachyspira murdochii DSM 12563 9142214 YP_003633523.1 CDS Bmur_1230 NC_014150.1 1426591 1427583 D KEGG: fnu:FN1177 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated protein Cas1 1426591..1427583 Brachyspira murdochii DSM 12563 9142215 YP_003633524.1 CDS Bmur_1231 NC_014150.1 1427590 1427874 D KEGG: dae:Dtox_0920 CRISPR-associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; CRISPR-associated protein Cas2 1427590..1427874 Brachyspira murdochii DSM 12563 9142216 YP_003633525.1 CDS Bmur_1232 NC_014150.1 1431608 1432795 D KEGG: bhy:BHWA1_00239 cAMP-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 1431608..1432795 Brachyspira murdochii DSM 12563 9142217 YP_003633526.1 CDS Bmur_1233 NC_014150.1 1432792 1433958 D KEGG: bhy:BHWA1_00239 cAMP-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 1432792..1433958 Brachyspira murdochii DSM 12563 9142218 YP_003633527.1 CDS Bmur_1234 NC_014150.1 1434290 1437064 D KEGG: bhy:BHWA1_01831 trep; hypothetical protein 1434290..1437064 Brachyspira murdochii DSM 12563 9142219 YP_003633528.1 CDS Bmur_1235 NC_014150.1 1437383 1438507 D PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_01601 variable surface protein - VspF; serpulina hyodysenteriae variable surface protein 1437383..1438507 Brachyspira murdochii DSM 12563 9142220 YP_003633529.1 CDS Bmur_1236 NC_014150.1 1438915 1439850 D KEGG: bhy:BHWA1_01298 hypothetical protein; hypothetical protein 1438915..1439850 Brachyspira murdochii DSM 12563 9142221 YP_003633530.1 CDS Bmur_1237 NC_014150.1 1439938 1440918 R PFAM: acetyl xylan esterase; KEGG: bhy:BHWA1_02085 acetyl xylan esterase, AXE1 family; acetyl xylan esterase complement(1439938..1440918) Brachyspira murdochii DSM 12563 9142222 YP_003633531.1 CDS Bmur_1238 NC_014150.1 1441471 1442670 D PFAM: major facilitator superfamily MFS_1; KEGG: bhy:BHWA1_01606 hypothetical protein; major facilitator superfamily protein 1441471..1442670 Brachyspira murdochii DSM 12563 9142223 YP_003633532.1 CDS Bmur_1239 NC_014150.1 1442708 1443898 D PFAM: major facilitator superfamily MFS_1; KEGG: bhy:BHWA1_01606 hypothetical protein; major facilitator superfamily protein 1442708..1443898 Brachyspira murdochii DSM 12563 9142224 YP_003633533.1 CDS Bmur_1240 NC_014150.1 1443907 1445709 R KEGG: bhy:BHWA1_01955 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(1443907..1445709) Brachyspira murdochii DSM 12563 9142225 YP_003633534.1 CDS Bmur_1241 NC_014150.1 1445980 1446339 R PFAM: protein of unknown function DUF1667; KEGG: bhy:BHWA1_01956 hypothetical protein; hypothetical protein complement(1445980..1446339) Brachyspira murdochii DSM 12563 9142226 YP_003633535.1 CDS Bmur_1242 NC_014150.1 1446386 1447252 R PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bhy:BHWA1_01957 arginase; arginase complement(1446386..1447252) Brachyspira murdochii DSM 12563 9142227 YP_003633536.1 CDS Bmur_1243 NC_014150.1 1447279 1448553 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bhy:BHWA1_01958 pyridine nucleotide- disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1447279..1448553) Brachyspira murdochii DSM 12563 9142228 YP_003633537.1 CDS Bmur_1244 NC_014150.1 1448585 1450024 R PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_01959 predicted dehydrogenase; FAD dependent oxidoreductase complement(1448585..1450024) Brachyspira murdochii DSM 12563 9142229 YP_003633538.1 CDS Bmur_1245 NC_014150.1 1450147 1451631 R KEGG: bhy:BHWA1_01960 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY-like; glycerol kinase complement(1450147..1451631) Brachyspira murdochii DSM 12563 9142230 YP_003633539.1 CDS Bmur_1246 NC_014150.1 1451723 1452463 R KEGG: bhy:BHWA1_01961 GlpF, glycerol uptake facilitator-like permease; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; MIP family channel protein complement(1451723..1452463) Brachyspira murdochii DSM 12563 9142231 YP_003633540.1 CDS Bmur_1247 NC_014150.1 1452545 1453042 R KEGG: bhy:BHWA1_01962 rubrerythrin; PFAM: Rubrerythrin; SMART: zinc finger RanBP2-type; rubrerythrin complement(1452545..1453042) Brachyspira murdochii DSM 12563 9142232 YP_003633541.1 CDS Bmur_1248 NC_014150.1 1453397 1453714 R KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein complement(1453397..1453714) Brachyspira murdochii DSM 12563 9142233 YP_003633542.1 CDS Bmur_1249 NC_014150.1 1453752 1454384 R KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein complement(1453752..1454384) Brachyspira murdochii DSM 12563 9142234 YP_003633543.1 CDS Bmur_1250 NC_014150.1 1454384 1454941 R KEGG: bhy:BHWA1_02535 hypothetical protein; hypothetical protein complement(1454384..1454941) Brachyspira murdochii DSM 12563 9142235 YP_003633544.1 CDS Bmur_1251 NC_014150.1 1454959 1456158 R PFAM: major facilitator superfamily MFS_1; KEGG: bhy:BHWA1_01963 arbinose efflux permease; major facilitator superfamily protein complement(1454959..1456158) Brachyspira murdochii DSM 12563 9142236 YP_003633545.1 CDS Bmur_1252 NC_014150.1 1456396 1456989 R PFAM: lipolytic protein G-D-S-L family; KEGG: bhy:BHWA1_01965 arylesterase; G-D-S-L family lipolytic protein complement(1456396..1456989) Brachyspira murdochii DSM 12563 9142237 YP_003633546.1 CDS Bmur_1254 NC_014150.1 1457595 1458359 R PFAM: polypeptide-transport-associated domain protein FtsQ-type; KEGG: bhy:BHWA1_01588 cell division protein; cell division protein FtsQ complement(1457595..1458359) Brachyspira murdochii DSM 12563 9142239 YP_003633547.1 CDS Bmur_1255 NC_014150.1 1458384 1460339 R KEGG: bhy:BHWA1_01589 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; methionyl-tRNA synthetase complement(1458384..1460339) Brachyspira murdochii DSM 12563 9142240 YP_003633548.1 CDS Bmur_1256 NC_014150.1 1460691 1462529 D KEGG: bhy:BHWA1_01590 methyl-accepting chemotaxis protein B; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 1460691..1462529 Brachyspira murdochii DSM 12563 9142241 YP_003633549.1 CDS Bmur_1257 NC_014150.1 1462632 1463516 R KEGG: bhy:BHWA1_01591 ElaC, metal-dependent hydrolases of the beta-lactamase superfamily; ElaC, metal-dependent hydrolase of the beta- lactamase superfamily complement(1462632..1463516) Brachyspira murdochii DSM 12563 9142242 YP_003633550.1 CDS Bmur_1258 NC_014150.1 1463702 1464475 D TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: bhy:BHWA1_01592 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 1463702..1464475 Brachyspira murdochii DSM 12563 9142243 YP_003633551.1 CDS Bmur_1259 NC_014150.1 1464556 1464888 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bhy:BHWA1_01593 SpoIIAA, anti-anti-sigma regulatory factor; anti-sigma-factor antagonist 1464556..1464888 Brachyspira murdochii DSM 12563 9142244 YP_003633552.1 CDS Bmur_1260 NC_014150.1 1464907 1465227 D PFAM: protein of unknown function YGGT; KEGG: bhy:BHWA1_01594 protein of unknown function YGGT family; hypothetical protein 1464907..1465227 Brachyspira murdochii DSM 12563 9142245 YP_003633553.1 CDS Bmur_1261 NC_014150.1 1465230 1467359 D KEGG: bhy:BHWA1_01595 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide repeat; hypothetical protein 1465230..1467359 Brachyspira murdochii DSM 12563 9142246 YP_003633554.1 CDS Bmur_1262 NC_014150.1 1467413 1467622 D PFAM: Domain of unknown function DUF1858; KEGG: bhy:BHWA1_01596 hypothetical protein; hypothetical protein 1467413..1467622 Brachyspira murdochii DSM 12563 9142247 YP_003633555.1 CDS Bmur_1263 NC_014150.1 1467755 1468501 R KEGG: bhy:BHWA1_01597 hypothetical protein; hypothetical protein complement(1467755..1468501) Brachyspira murdochii DSM 12563 9142248 YP_003633556.1 CDS Bmur_1264 NC_014150.1 1468955 1469068 R KEGG: bhy:BHWA1_00015 hypothetical protein; hypothetical protein complement(1468955..1469068) Brachyspira murdochii DSM 12563 9142249 YP_003633557.1 CDS Bmur_1265 NC_014150.1 1469298 1469561 R KEGG: bhy:BHWA1_02014 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 complement(1469298..1469561) Brachyspira murdochii DSM 12563 9142250 YP_003633558.1 CDS Bmur_1267 NC_014150.1 1470334 1471512 R KEGG: bhy:BHWA1_02011 short-chain alcohol dehydrogenase; PFAM: short-chain alcohol dehydrogenase; trans-2-enoyl-CoA reductase (NAD(+)) complement(1470334..1471512) Brachyspira murdochii DSM 12563 9142253 YP_003633559.1 CDS Bmur_1268 NC_014150.1 1471620 1472729 R PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_01875 glycoslytransferase; glycosyl transferase complement(1471620..1472729) Brachyspira murdochii DSM 12563 9142254 YP_003633560.1 CDS Bmur_1269 NC_014150.1 1472763 1473473 R KEGG: conserved hypothetical protein; hypothetical protein complement(1472763..1473473) Brachyspira murdochii DSM 12563 9142255 YP_003633561.1 CDS Bmur_1270 NC_014150.1 1473531 1474478 R KEGG: bhy:BHWA1_01900 hypothetical protein; hypothetical protein complement(1473531..1474478) Brachyspira murdochii DSM 12563 9142256 YP_003633562.1 CDS Bmur_1271 NC_014150.1 1474514 1475308 R PFAM: MgtC/SapB transporter; KEGG: bhy:BHWA1_01901 MgtC family protein; MgtC/SapB transporter complement(1474514..1475308) Brachyspira murdochii DSM 12563 9142257 YP_003633563.1 CDS Bmur_1272 NC_014150.1 1475333 1475755 R PFAM: PTS system fructose subfamily IIA component; KEGG: bhy:BHWA1_01902 PTS system, IIa component; PTS system fructose subfamily transporter subunit IIA complement(1475333..1475755) Brachyspira murdochii DSM 12563 9142258 YP_003633564.1 CDS Bmur_1273 NC_014150.1 1475944 1476396 D KEGG: bhy:BHWA1_02025 dual specificity protein phosphatase; dual specificity protein phosphatase 1475944..1476396 Brachyspira murdochii DSM 12563 9142259 YP_003633565.1 CDS Bmur_1274 NC_014150.1 1477027 1478139 R KEGG: bhy:BHWA1_01786 hypothetical protein; hypothetical protein complement(1477027..1478139) Brachyspira murdochii DSM 12563 9142260 YP_003633566.1 CDS Bmur_1275 NC_014150.1 1478219 1478821 R KEGG: bhy:BHWA1_01787 OmpA family protein; OmpA family protein complement(1478219..1478821) Brachyspira murdochii DSM 12563 9142261 YP_003633567.1 CDS Bmur_1276 NC_014150.1 1478843 1479460 R KEGG: bhy:BHWA1_01788 outer membrane protein; hypothetical protein complement(1478843..1479460) Brachyspira murdochii DSM 12563 9142262 YP_003633568.1 CDS Bmur_1277 NC_014150.1 1479699 1481417 R PFAM: methyltransferase type 11; KEGG: bhy:BHWA1_01789 2-polyprenyl-3-methyl-5- hydroxy-6-metoxy-1,4-benzoquinol methylase; methyltransferase type 11 complement(1479699..1481417) Brachyspira murdochii DSM 12563 9142263 YP_003633569.1 CDS Bmur_1278 NC_014150.1 1481811 1481951 R hypothetical protein complement(1481811..1481951) Brachyspira murdochii DSM 12563 9142264 YP_003633570.1 CDS Bmur_1279 NC_014150.1 1482128 1482559 R KEGG: bhy:BHWA1_01185 hypothetical protein; hypothetical protein complement(1482128..1482559) Brachyspira murdochii DSM 12563 9142265 YP_003633571.1 CDS Bmur_1280 NC_014150.1 1482853 1484136 R SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: bhy:BHWA1_01817 adenylosuccinate synthase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase complement(1482853..1484136) Brachyspira murdochii DSM 12563 9142266 YP_003633572.1 CDS Bmur_1281 NC_014150.1 1484387 1486837 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_01820 TPR domain-containing protein; hypothetical protein 1484387..1486837 Brachyspira murdochii DSM 12563 9142267 YP_003633573.1 CDS Bmur_1282 NC_014150.1 1486905 1488170 D KEGG: bhy:BHWA1_01821 AAA 5, ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA 1486905..1488170 Brachyspira murdochii DSM 12563 9142268 YP_003633574.1 CDS Bmur_1283 NC_014150.1 1488389 1489441 D PFAM: 5-methylcytosine restriction system component- like protein; KEGG: bhy:BHWA1_01822 5-methylcytosine- specific restriction enzyme subunit Mcr; 5-methylcytosine restriction system component- like protein 1488389..1489441 Brachyspira murdochii DSM 12563 9142269 YP_003633575.1 CDS Bmur_1284 NC_014150.1 1489447 1492500 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_01828 hypothetical protein; hypothetical protein complement(1489447..1492500) Brachyspira murdochii DSM 12563 9142270 YP_003633576.1 CDS Bmur_1285 NC_014150.1 1492658 1493608 D PFAM: cobalamin synthesis protein P47K; KEGG: bhy:BHWA1_01861 GTPase; cobalamin synthesis protein P47K 1492658..1493608 Brachyspira murdochii DSM 12563 9142271 YP_003633577.1 CDS Bmur_1286 NC_014150.1 1493676 1494140 R KEGG: conserved hypothetical protein; hypothetical protein complement(1493676..1494140) Brachyspira murdochii DSM 12563 9142272 YP_003633578.1 CDS Bmur_1287 NC_014150.1 1495514 1495687 R hypothetical protein complement(1495514..1495687) Brachyspira murdochii DSM 12563 9142273 YP_003633579.1 CDS Bmur_1288 NC_014150.1 1495821 1496969 R PFAM: integrase; KEGG: mth:MTH893 integrase-recombinase; integrase complement(1495821..1496969) Brachyspira murdochii DSM 12563 9142274 YP_003633580.1 CDS Bmur_1289 NC_014150.1 1497381 1497566 D KEGG: amsh-lp; associated molecule with the SH3 domain of STAM (AMSH) like protein; K11867 AMSH-like protease; STAM (AMSH)-SH3 domain associated-like protein 1497381..1497566 Brachyspira murdochii DSM 12563 9142275 YP_003633581.1 CDS Bmur_1290 NC_014150.1 1497667 1497891 R KEGG: ote:Oter_2697 hypothetical protein; hypothetical protein complement(1497667..1497891) Brachyspira murdochii DSM 12563 9142276 YP_003633582.1 CDS Bmur_1291 NC_014150.1 1498041 1498250 R KEGG: crp:CRP_182 hypothetical protein; hypothetical protein complement(1498041..1498250) Brachyspira murdochii DSM 12563 9142277 YP_003633583.1 CDS Bmur_1292 NC_014150.1 1498265 1500148 R KEGG: bhy:BHWA1_01851 Hvp 101 VSH-1 tail protein; hypothetical protein complement(1498265..1500148) Brachyspira murdochii DSM 12563 9142278 YP_003633584.1 CDS Bmur_1293 NC_014150.1 1500230 1500769 R KEGG: hypothetical protein; hypothetical protein complement(1500230..1500769) Brachyspira murdochii DSM 12563 9142279 YP_003633585.1 CDS Bmur_1294 NC_014150.1 1500907 1501344 R KEGG: viral A-type inclusion protein; hypothetical protein complement(1500907..1501344) Brachyspira murdochii DSM 12563 9142280 YP_003633586.1 CDS Bmur_1295 NC_014150.1 1501346 1501939 R PFAM: glycoside hydrolase 19; KEGG: bhy:BHWA1_01853 Lys - endolysin; glycoside hydrolase; glycoside hydrolase 19 complement(1501346..1501939) Brachyspira murdochii DSM 12563 9142281 YP_003633587.1 CDS Bmur_1296 NC_014150.1 1501943 1502287 R KEGG: pmx:PERMA_1019 zinc ribbon domain family; hypothetical protein complement(1501943..1502287) Brachyspira murdochii DSM 12563 9142282 YP_003633588.1 CDS Bmur_1297 NC_014150.1 1502361 1502750 R PFAM: Sigma-70 region 4 type 2; KEGG: bhy:BHWA1_00983 hypothetical protein; response regulator receiver protein complement(1502361..1502750) Brachyspira murdochii DSM 12563 9142283 YP_003633589.1 CDS Bmur_1299 NC_014150.1 1502958 1504901 R KEGG: hypothetical protein; hypothetical protein complement(1502958..1504901) Brachyspira murdochii DSM 12563 9142285 YP_003633590.1 CDS Bmur_1300 NC_014150.1 1504914 1506032 R KEGG: mmi:MMAR_2102 PE-PGRS family protein; hypothetical protein complement(1504914..1506032) Brachyspira murdochii DSM 12563 9142286 YP_003633591.1 CDS Bmur_1301 NC_014150.1 1506035 1506487 R KEGG: bhy:BHWA1_01147 hypothetical protein; hypothetical protein complement(1506035..1506487) Brachyspira murdochii DSM 12563 9142287 YP_003633592.1 CDS Bmur_1302 NC_014150.1 1506487 1507383 R KEGG: mmy:MSC_0285 prolipoprotein; hypothetical protein complement(1506487..1507383) Brachyspira murdochii DSM 12563 9142288 YP_003633593.1 CDS Bmur_1303 NC_014150.1 1507380 1510850 R KEGG: hau:Haur_1369 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family complement(1507380..1510850) Brachyspira murdochii DSM 12563 9142289 YP_003633594.1 CDS Bmur_1304 NC_014150.1 1510940 1511128 R KEGG: hypothetical protein; hypothetical protein complement(1510940..1511128) Brachyspira murdochii DSM 12563 9142290 YP_003633595.1 CDS Bmur_1305 NC_014150.1 1511194 1511541 R KEGG: hypothetical protein; hypothetical protein complement(1511194..1511541) Brachyspira murdochii DSM 12563 9142291 YP_003633596.1 CDS Bmur_1306 NC_014150.1 1511553 1512944 R KEGG: mac:MA3808 hypothetical protein; hypothetical protein complement(1511553..1512944) Brachyspira murdochii DSM 12563 9142292 YP_003633597.1 CDS Bmur_1307 NC_014150.1 1513038 1513364 R KEGG: conserved hypothetical protein; hypothetical protein complement(1513038..1513364) Brachyspira murdochii DSM 12563 9142293 YP_003633598.1 CDS Bmur_1308 NC_014150.1 1513376 1513834 R TIGRFAM: phage protein, HK97 gp10 family; KEGG: ATP-dependent RNA helicase; phage protein, HK97 gp10 family complement(1513376..1513834) Brachyspira murdochii DSM 12563 9142294 YP_003633599.1 CDS Bmur_1309 NC_014150.1 1513836 1514189 R TIGRFAM: phage head-tail adaptor; KEGG: cby:CLM_3411 DNA polymerase I; phage head-tail adaptor complement(1513836..1514189) Brachyspira murdochii DSM 12563 9142295 YP_003633600.1 CDS Bmur_1310 NC_014150.1 1514257 1514697 R TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: rsp:RSP_6247 phage-related protein, DNA packing; DNA packaging phage protein complement(1514257..1514697) Brachyspira murdochii DSM 12563 9142296 YP_003633601.1 CDS Bmur_1311 NC_014150.1 1514722 1516005 R KEGG: lga:LGAS_1485 phage phi-C31 GP36 major capsid- like protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; phage major capsid protein, HK97 family complement(1514722..1516005) Brachyspira murdochii DSM 12563 9142297 YP_003633602.1 CDS Bmur_1313 NC_014150.1 1516675 1517952 R KEGG: det:DET1087 HK97 family portal protein , TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family complement(1516675..1517952) Brachyspira murdochii DSM 12563 9142299 YP_003633603.1 CDS Bmur_1314 NC_014150.1 1518082 1518480 D KEGG: pmr:PMI0923 phage terminase, small subunit; phage terminase small subunit 1518082..1518480 Brachyspira murdochii DSM 12563 9142300 YP_003633604.1 CDS Bmur_1315 NC_014150.1 1518489 1520261 D PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase; terminase 1518489..1520261 Brachyspira murdochii DSM 12563 9142301 YP_003633605.1 CDS Bmur_1316 NC_014150.1 1520771 1520977 D PFAM: Protein of unknown function DUF1778; KEGG: nmu:Nmul_B2796 mobilization protein; hypothetical protein 1520771..1520977 Brachyspira murdochii DSM 12563 9142302 YP_003633606.1 CDS Bmur_1317 NC_014150.1 1521041 1522918 D KEGG: spe:Spro_0109 hypothetical protein; hypothetical protein 1521041..1522918 Brachyspira murdochii DSM 12563 9142303 YP_003633607.1 CDS Bmur_1318 NC_014150.1 1523108 1524829 D KEGG: bcm:Bcenmc03_7078 hypothetical protein; hypothetical protein 1523108..1524829 Brachyspira murdochii DSM 12563 9142304 YP_003633608.1 CDS Bmur_1319 NC_014150.1 1525041 1525169 R KEGG: hut:Huta_2286 hypothetical protein; hypothetical protein complement(1525041..1525169) Brachyspira murdochii DSM 12563 9142305 YP_003633609.1 CDS Bmur_1320 NC_014150.1 1525169 1526116 R PFAM: integrase domain protein SAM domain protein; integrase; KEGG: tme:Tmel_0169 phage integrase; integrase domain-containing protein SAM domain-containing protein complement(1525169..1526116) Brachyspira murdochii DSM 12563 9142306 YP_003633610.1 CDS Bmur_1321 NC_014150.1 1526195 1526602 R KEGG: bhy:BHWA1_01032 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(1526195..1526602) Brachyspira murdochii DSM 12563 9142307 YP_003633611.1 CDS Bmur_1322 NC_014150.1 1526777 1527127 R KEGG: bpy:Bphyt_7293 hypothetical protein; hypothetical protein complement(1526777..1527127) Brachyspira murdochii DSM 12563 9142308 YP_003633612.1 CDS Bmur_1323 NC_014150.1 1527150 1527320 R KEGG: bwe:BcerKBAB4_0827 group-specific protein; group-specific protein complement(1527150..1527320) Brachyspira murdochii DSM 12563 9142309 YP_003633613.1 CDS Bmur_1324 NC_014150.1 1527317 1527547 R KEGG: conserved hypothetical protein; K12840 splicing factor 45; hypothetical protein complement(1527317..1527547) Brachyspira murdochii DSM 12563 9142310 YP_003633614.1 CDS Bmur_1325 NC_014150.1 1527551 1527751 R KEGG: predicted protein; hypothetical protein complement(1527551..1527751) Brachyspira murdochii DSM 12563 9142311 YP_003633615.1 CDS Bmur_1326 NC_014150.1 1527755 1527949 R KEGG: hypothetical protein; hypothetical protein complement(1527755..1527949) Brachyspira murdochii DSM 12563 9142312 YP_003633616.1 CDS Bmur_1327 NC_014150.1 1527980 1528699 R KEGG: rme:Rmet_6243 hypothetical protein; hypothetical protein complement(1527980..1528699) Brachyspira murdochii DSM 12563 9142313 YP_003633617.1 CDS Bmur_1328 NC_014150.1 1528696 1529085 R KEGG: hypothetical protein; hypothetical protein complement(1528696..1529085) Brachyspira murdochii DSM 12563 9142314 YP_003633618.1 CDS Bmur_1329 NC_014150.1 1529075 1529929 R KEGG: hypothetical protein; hypothetical protein complement(1529075..1529929) Brachyspira murdochii DSM 12563 9142315 YP_003633619.1 CDS Bmur_1330 NC_014150.1 1529926 1530153 R KEGG: ate:Athe_1169 chromosome segregation protein SMC; hypothetical protein complement(1529926..1530153) Brachyspira murdochii DSM 12563 9142316 YP_003633620.1 CDS Bmur_1331 NC_014150.1 1530166 1530435 R KEGG: cth:Cthe_1731 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(1530166..1530435) Brachyspira murdochii DSM 12563 9142317 YP_003633621.1 CDS Bmur_1332 NC_014150.1 1530498 1530788 R KEGG: cac:CAC1607 hypothetical protein; hypothetical protein complement(1530498..1530788) Brachyspira murdochii DSM 12563 9142318 YP_003633622.1 CDS Bmur_1333 NC_014150.1 1530974 1531825 R SMART: AAA ATPase; KEGG: pml:ATP_00193 chromosomal replication initiator protein; ATPase AAA complement(1530974..1531825) Brachyspira murdochii DSM 12563 9142319 YP_003633623.1 CDS Bmur_1334 NC_014150.1 1531791 1532690 R KEGG: conserved hypothetical protein; hypothetical protein complement(1531791..1532690) Brachyspira murdochii DSM 12563 9142320 YP_003633624.1 CDS Bmur_1335 NC_014150.1 1533198 1533863 R KEGG: bhy:BHWA1_01726 flavin reductase like domain containing protein; PFAM: flavin reductase domain protein FMN-binding; Rubredoxin-type Fe(Cys)4 protein; SMART: flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein complement(1533198..1533863) Brachyspira murdochii DSM 12563 9142321 YP_003633625.1 CDS Bmur_1336 NC_014150.1 1534011 1535384 R KEGG: bhy:BHWA1_01727 AlsT, Na+/alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein complement(1534011..1535384) Brachyspira murdochii DSM 12563 9142322 YP_003633626.1 CDS Bmur_1337 NC_014150.1 1535463 1536572 R TIGRFAM: alanine racemase; KEGG: bhy:BHWA1_01728 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(1535463..1536572) Brachyspira murdochii DSM 12563 9142323 YP_003633627.1 CDS Bmur_1338 NC_014150.1 1536740 1539613 R KEGG: bhy:BHWA1_01729 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1536740..1539613) Brachyspira murdochii DSM 12563 9142324 YP_003633628.1 CDS Bmur_1339 NC_014150.1 1539733 1540581 R KEGG: bhy:BHWA1_01731 flagellar basal body rod protein; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; fagellar hook-basal body protein complement(1539733..1540581) Brachyspira murdochii DSM 12563 9142325 YP_003633629.1 CDS Bmur_1340 NC_014150.1 1540601 1541878 R KEGG: bhy:BHWA1_01732 UDP-N-acetylglucosamine 1- carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); UDP-N-acetylglucosamine1- carboxyvinyltransferase complement(1540601..1541878) Brachyspira murdochii DSM 12563 9142326 YP_003633630.1 CDS Bmur_1341 NC_014150.1 1542221 1544380 R KEGG: bhy:BHWA1_01602 single-stranded-D-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ complement(1542221..1544380) Brachyspira murdochii DSM 12563 9142327 YP_003633631.1 CDS Bmur_1342 NC_014150.1 1544520 1545695 D KEGG: bhy:BHWA1_01603 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 1544520..1545695 Brachyspira murdochii DSM 12563 9142328 YP_003633632.1 CDS Bmur_1343 NC_014150.1 1546016 1546195 D KEGG: bhy:BHWA1_02015 hypothetical protein; hypothetical protein 1546016..1546195 Brachyspira murdochii DSM 12563 9142329 YP_003633633.1 CDS Bmur_1344 NC_014150.1 1546322 1546792 D KEGG: bhy:BHWA1_02016 hypothetical protein; hypothetical protein 1546322..1546792 Brachyspira murdochii DSM 12563 9142330 YP_003633634.1 CDS Bmur_1345 NC_014150.1 1546793 1547791 R KEGG: bhy:BHWA1_02017 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(1546793..1547791) Brachyspira murdochii DSM 12563 9142331 YP_003633635.1 CDS Bmur_1346 NC_014150.1 1547992 1549332 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bhy:BHWA1_02018 coenzyme A disulfide reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1547992..1549332 Brachyspira murdochii DSM 12563 9142332 YP_003633636.1 CDS Bmur_1347 NC_014150.1 1549948 1551162 D KEGG: bhy:BHWA1_02034 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 1549948..1551162 Brachyspira murdochii DSM 12563 9142333 YP_003633637.1 CDS Bmur_1348 NC_014150.1 1551606 1552643 D KEGG: bhy:BHWA1_02033 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 1551606..1552643 Brachyspira murdochii DSM 12563 9142334 YP_003633638.1 CDS Bmur_1349 NC_014150.1 1553050 1553340 R PFAM: DNA polymerase beta domain protein region; KEGG: bhy:BHWA1_02032 nucleotidyltransferase; DNA polymerase beta domain-containing protein region complement(1553050..1553340) Brachyspira murdochii DSM 12563 9142335 YP_003633639.1 CDS Bmur_1350 NC_014150.1 1553354 1553773 R KEGG: bhy:BHWA1_02031 nucleotidyltransferase substrate binding protein; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: nucleotidyltransferase substrate binding protein HI0074; nucleotidyltransferase substrate binding protein complement(1553354..1553773) Brachyspira murdochii DSM 12563 9142336 YP_003633640.1 CDS Bmur_1351 NC_014150.1 1554554 1555909 R KEGG: bhy:BHWA1_02020 predicted phosphate starvation-inducible protein PhoH-like ATPase; PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; PhoH family protein complement(1554554..1555909) Brachyspira murdochii DSM 12563 9142337 YP_003633641.1 CDS Bmur_1352 NC_014150.1 1556003 1558186 R PFAM: protein of unknown function DUF262; KEGG: hhe:HH1029 hypothetical protein; hypothetical protein complement(1556003..1558186) Brachyspira murdochii DSM 12563 9142338 YP_003633642.1 CDS Bmur_1353 NC_014150.1 1558206 1559939 R PFAM: protein of unknown function DUF262; KEGG: hhe:HH1030 hypothetical protein; hypothetical protein complement(1558206..1559939) Brachyspira murdochii DSM 12563 9142339 YP_003633643.1 CDS Bmur_1354 NC_014150.1 1560111 1560698 D KEGG: bhy:BHWA1_02021 acetyltransferase (isoleucine patch superfamily); acetyltransferase 1560111..1560698 Brachyspira murdochii DSM 12563 9142340 YP_003633644.1 CDS Bmur_1355 NC_014150.1 1560726 1561820 D KEGG: bhy:BHWA1_02022 hydrolase of the alpha/beta superfamily; alpha/beta superfamily hydrolase 1560726..1561820 Brachyspira murdochii DSM 12563 9142341 YP_003633645.1 CDS Bmur_1356 NC_014150.1 1562002 1562433 R KEGG: slo:Shew_3661 hypothetical protein; hypothetical protein complement(1562002..1562433) Brachyspira murdochii DSM 12563 9142342 YP_003633646.1 CDS Bmur_1357 NC_014150.1 1562435 1562635 R KEGG: hypothetical protein; hypothetical protein complement(1562435..1562635) Brachyspira murdochii DSM 12563 9142343 YP_003633647.1 CDS Bmur_1358 NC_014150.1 1562909 1563799 R PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: bhy:BHWA1_02024 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1562909..1563799) Brachyspira murdochii DSM 12563 9142344 YP_003633648.1 CDS Bmur_1359 NC_014150.1 1563953 1564996 D KEGG: dsa:Desal_3560 membrane protein; hypothetical protein 1563953..1564996 Brachyspira murdochii DSM 12563 9142345 YP_003633649.1 CDS Bmur_1360 NC_014150.1 1565039 1566835 R KEGG: bhy:BHWA1_01642 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(1565039..1566835) Brachyspira murdochii DSM 12563 9142346 YP_003633650.1 CDS Bmur_1361 NC_014150.1 1567288 1568421 D KEGG: bhy:BHWA1_01718 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; von Willebrand factor A 1567288..1568421 Brachyspira murdochii DSM 12563 9142348 YP_003633651.1 CDS Bmur_1362 NC_014150.1 1568448 1569578 D KEGG: bhy:BHWA1_02529 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; hypothetical protein 1568448..1569578 Brachyspira murdochii DSM 12563 9142349 YP_003633652.1 CDS Bmur_1363 NC_014150.1 1569796 1570680 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bhy:BHWA1_01807 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(1569796..1570680) Brachyspira murdochii DSM 12563 9142350 YP_003633653.1 CDS Bmur_1364 NC_014150.1 1570955 1571542 D PFAM: thymidine kinase; KEGG: bhy:BHWA1_01863 thymidine kinase; thymidine kinase 1570955..1571542 Brachyspira murdochii DSM 12563 9142351 YP_003633654.1 CDS Bmur_1365 NC_014150.1 1571629 1572516 R PFAM: Domain of unknown function DUF1858; protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; KEGG: bhy:BHWA1_01995 hypothetical protein; hypothetical protein complement(1571629..1572516) Brachyspira murdochii DSM 12563 9142352 YP_003633655.1 CDS Bmur_1366 NC_014150.1 1572713 1573894 D KEGG: bhy:BHWA1_01994 N-acyl-D-glucosamine 2- epimerase; PFAM: N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase 1572713..1573894 Brachyspira murdochii DSM 12563 9142353 YP_003633656.1 CDS Bmur_1367 NC_014150.1 1574055 1575137 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: hpg:HPG27_1301 adenine specific DNA methyltransferase; DNA methylase N-4/N-6 domain-containing protein 1574055..1575137 Brachyspira murdochii DSM 12563 9142354 YP_003633657.1 CDS Bmur_1368 NC_014150.1 1575130 1575936 D KEGG: conserved hypothetical protein; type II site-specific deoxyribonuclease 1575130..1575936 Brachyspira murdochii DSM 12563 9142355 YP_003633658.1 CDS Bmur_1369 NC_014150.1 1575988 1576788 D KEGG: bhy:BHWA1_01992 hypothetical protein; hypothetical protein 1575988..1576788 Brachyspira murdochii DSM 12563 9142356 YP_003633659.1 CDS Bmur_1370 NC_014150.1 1576952 1577104 R hypothetical protein complement(1576952..1577104) Brachyspira murdochii DSM 12563 9142357 YP_003633660.1 CDS Bmur_1371 NC_014150.1 1577237 1577359 R KEGG: bhy:BHWA1_01899 hypothetical protein; hypothetical protein complement(1577237..1577359) Brachyspira murdochii DSM 12563 9142358 YP_003633661.1 CDS Bmur_1372 NC_014150.1 1577383 1578972 R TIGRFAM: arginyl-tRNA synthetase; KEGG: bhy:BHWA1_01783 arginyl-tRNA synthease; arginyl-tRNA synthetase complement(1577383..1578972) Brachyspira murdochii DSM 12563 9142359 YP_003633662.1 CDS Bmur_1373 NC_014150.1 1579112 1579504 D KEGG: bhy:BHWA1_01888 hypothetical protein; hypothetical protein 1579112..1579504 Brachyspira murdochii DSM 12563 9142360 YP_003633663.1 CDS Bmur_1374 NC_014150.1 1579545 1580030 D KEGG: bhy:BHWA1_01887 phosphotransferase system mannitol/fructose-specific IIA domain protein; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 1579545..1580030 Brachyspira murdochii DSM 12563 9142361 YP_003633664.1 CDS Bmur_1375 NC_014150.1 1580033 1580806 D TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: bhy:BHWA1_01886 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1580033..1580806 Brachyspira murdochii DSM 12563 9142362 YP_003633665.1 CDS Bmur_1376 NC_014150.1 1581216 1581680 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bhy:BHWA1_01704 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase complement(1581216..1581680) Brachyspira murdochii DSM 12563 9142363 YP_003633666.1 CDS Bmur_1377 NC_014150.1 1581695 1581937 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_01705 [2Fe-2S] binding domain protein; BFD domain-containing protein (2Fe-2S)-binding protein complement(1581695..1581937) Brachyspira murdochii DSM 12563 9142364 YP_003633667.1 CDS Bmur_1378 NC_014150.1 1582140 1583198 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bhy:BHWA1_01862 Tdh, threonine dehydrogenase- like Zn-dependent dehydrogenase; alcohol dehydrogenase complement(1582140..1583198) Brachyspira murdochii DSM 12563 9142365 YP_003633668.1 CDS Bmur_1379 NC_014150.1 1583282 1584178 R KEGG: bhy:BHWA1_01973 nicotinamidase; nicotinamidase complement(1583282..1584178) Brachyspira murdochii DSM 12563 9142366 YP_003633669.1 CDS Bmur_1380 NC_014150.1 1584432 1586579 R KEGG: bhy:BHWA1_01826 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(1584432..1586579) Brachyspira murdochii DSM 12563 9142367 YP_003633670.1 CDS Bmur_1381 NC_014150.1 1586788 1587948 R PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_01827 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1586788..1587948) Brachyspira murdochii DSM 12563 9142368 YP_003633671.1 CDS Bmur_1382 NC_014150.1 1588398 1588829 R KEGG: mta:Moth_0672 protein translocase subunit SecB; hypothetical protein complement(1588398..1588829) Brachyspira murdochii DSM 12563 9142369 YP_003633672.1 CDS Bmur_1383 NC_014150.1 1588810 1589274 R KEGG: conserved hypothetical protein; hypothetical protein complement(1588810..1589274) Brachyspira murdochii DSM 12563 9142370 YP_003633673.1 CDS Bmur_1384 NC_014150.1 1589300 1589716 R KEGG: conserved hypothetical protein; hypothetical protein complement(1589300..1589716) Brachyspira murdochii DSM 12563 9142371 YP_003633674.1 CDS Bmur_1385 NC_014150.1 1589928 1591097 R PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_01768 alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1589928..1591097) Brachyspira murdochii DSM 12563 9142372 YP_003633675.1 CDS Bmur_1386 NC_014150.1 1591482 1592402 R KEGG: bhy:BHWA1_01774 hypothetical protein; hypothetical protein complement(1591482..1592402) Brachyspira murdochii DSM 12563 9142373 YP_003633676.1 CDS Bmur_1387 NC_014150.1 1593413 1594138 D PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bhy:BHWA1_01775 tetrapyrrole methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 1593413..1594138 Brachyspira murdochii DSM 12563 9142374 YP_003633677.1 CDS Bmur_1388 NC_014150.1 1594149 1594442 D KEGG: bhy:BHWA1_01776 hypothetical protein; hypothetical protein 1594149..1594442 Brachyspira murdochii DSM 12563 9142375 YP_003633678.1 CDS Bmur_1389 NC_014150.1 1594558 1595520 R KEGG: bhy:BHWA1_01777 DNA-binding response regulator, LuxR family protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(1594558..1595520) Brachyspira murdochii DSM 12563 9142376 YP_003633679.1 CDS Bmur_1390 NC_014150.1 1595517 1596290 R KEGG: bhy:BHWA1_01778 signal transduction histidine kinase; signal transduction histidine kinase complement(1595517..1596290) Brachyspira murdochii DSM 12563 9142377 YP_003633680.1 CDS Bmur_1391 NC_014150.1 1597163 1597903 D SMART: protein phosphatase 2C domain protein; KEGG: bhy:BHWA1_01700 serine/threonine protein phosphotase; Ser/Thr phosphatase 1597163..1597903 Brachyspira murdochii DSM 12563 9142378 YP_003633681.1 CDS Bmur_1392 NC_014150.1 1598107 1598595 D KEGG: bhy:BHWA1_01699 hypothetical hypothetical protein; hypothetical protein 1598107..1598595 Brachyspira murdochii DSM 12563 9142379 YP_003633682.1 CDS Bmur_1393 NC_014150.1 1598659 1598892 D KEGG: bhy:BHWA1_01897 hypothetical protein; hypothetical protein 1598659..1598892 Brachyspira murdochii DSM 12563 9142380 YP_003633683.1 CDS Bmur_1394 NC_014150.1 1598912 1599601 D KEGG: bhy:BHWA1_01896 hypothetical protein; hypothetical protein 1598912..1599601 Brachyspira murdochii DSM 12563 9142381 YP_003633684.1 CDS Bmur_1395 NC_014150.1 1599996 1601102 D KEGG: bhy:BHWA1_01895 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 1599996..1601102 Brachyspira murdochii DSM 12563 9142382 YP_003633685.1 CDS Bmur_1396 NC_014150.1 1601174 1601836 R KEGG: bhy:BHWA1_01894 redox-sensing transcriptional repressor REX; PFAM: CoA-binding domain protein; SMART: CoA-binding domain protein; CoA-binding protein complement(1601174..1601836) Brachyspira murdochii DSM 12563 9142383 YP_003633686.1 CDS Bmur_1397 NC_014150.1 1602222 1602335 D KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; hypothetical protein 1602222..1602335 Brachyspira murdochii DSM 12563 9142384 YP_003633687.1 CDS Bmur_1398 NC_014150.1 1602453 1603184 D PFAM: Silent information regulator protein Sir2; KEGG: bhy:BHWA1_01893 D-dependent deacetylase; silent information regulator protein Sir2 1602453..1603184 Brachyspira murdochii DSM 12563 9142385 YP_003633688.1 CDS Bmur_1399 NC_014150.1 1603367 1603840 R KEGG: bhy:BHWA1_01892 hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein complement(1603367..1603840) Brachyspira murdochii DSM 12563 9142386 YP_003633689.1 CDS Bmur_1400 NC_014150.1 1603852 1604319 R KEGG: bhy:BHWA1_01891 hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein complement(1603852..1604319) Brachyspira murdochii DSM 12563 9142387 YP_003633690.1 CDS Bmur_1401 NC_014150.1 1604338 1604778 R KEGG: bhy:BHWA1_01891 hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein complement(1604338..1604778) Brachyspira murdochii DSM 12563 9142388 YP_003633691.1 CDS Bmur_1402 NC_014150.1 1605445 1606740 R TIGRFAM: enolase; KEGG: bhy:BHWA1_01890 phosphopyruvate hydratase; PFAM: Enolase-like; enolase complement(1605445..1606740) Brachyspira murdochii DSM 12563 9142389 YP_003633692.1 CDS Bmur_1403 NC_014150.1 1606994 1607740 R SMART: phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; KEGG: bhy:BHWA1_01885 phosphoglycerate mutase; PFAM: phosphoglycerate mutase; phosphoglycerate mutase complement(1606994..1607740) Brachyspira murdochii DSM 12563 9142390 YP_003633693.1 CDS Bmur_1404 NC_014150.1 1607873 1609432 D KEGG: bhy:BHWA1_01884 TPR domain-containing protein; hypothetical protein 1607873..1609432 Brachyspira murdochii DSM 12563 9142391 YP_003633694.1 CDS Bmur_1405 NC_014150.1 1609844 1610296 R KEGG: bhy:BHWA1_01795 hypothetical protein; hypothetical protein complement(1609844..1610296) Brachyspira murdochii DSM 12563 9142392 YP_003633695.1 CDS Bmur_1406 NC_014150.1 1610415 1610855 D KEGG: bhy:BHWA1_01889 hypothetical protein; hypothetical protein 1610415..1610855 Brachyspira murdochii DSM 12563 9142393 YP_003633696.1 CDS Bmur_1407 NC_014150.1 1610950 1611792 D KEGG: bhy:BHWA1_01859 hypothetical protein; hypothetical protein 1610950..1611792 Brachyspira murdochii DSM 12563 9142394 YP_003633697.1 CDS Bmur_1408 NC_014150.1 1612066 1613718 D PFAM: Na+/H+ antiporter NhaC-like; KEGG: bhy:BHWA1_01860 Na+/H+ antiporter; Na+/H+ antiporter NhaC 1612066..1613718 Brachyspira murdochii DSM 12563 9142395 YP_003633698.1 CDS Bmur_1409 NC_014150.1 1614375 1615169 D KEGG: bhy:BHWA1_01825 hypothetical protein; hypothetical protein 1614375..1615169 Brachyspira murdochii DSM 12563 9142396 YP_003633699.1 CDS Bmur_1410 NC_014150.1 1615169 1615447 D KEGG: bhy:BHWA1_01824 hypothetical protein; hypothetical protein 1615169..1615447 Brachyspira murdochii DSM 12563 9142397 YP_003633700.1 CDS Bmur_1411 NC_014150.1 1615527 1616756 D KEGG: bhy:BHWA1_01824 hypothetical protein; hypothetical protein 1615527..1616756 Brachyspira murdochii DSM 12563 9142398 YP_003633701.1 CDS Bmur_1412 NC_014150.1 1616815 1617696 D KEGG: bhy:BHWA1_01850 Hvp 32 VSH-1 tail protein; Hvp 32 VSH-1 tail protein 1616815..1617696 Brachyspira murdochii DSM 12563 9142399 YP_003633702.1 CDS Bmur_1413 NC_014150.1 1617852 1620014 D KEGG: bhy:BHWA1_01851 Hvp 101 VSH-1 tail protein; Hvp 101 VSH-1 tail protein 1617852..1620014 Brachyspira murdochii DSM 12563 9142400 YP_003633703.1 CDS Bmur_1414 NC_014150.1 1620024 1620638 D PFAM: glycoside hydrolase 19; KEGG: bhy:BHWA1_01853 Lys - endolysin; glycoside hydrolase; glycoside hydrolase 19 1620024..1620638 Brachyspira murdochii DSM 12563 9142401 YP_003633704.1 CDS Bmur_1415 NC_014150.1 1620933 1621727 D KEGG: bhy:BHWA1_01854 OrfF; hypothetical protein 1620933..1621727 Brachyspira murdochii DSM 12563 9142402 YP_003633705.1 CDS Bmur_1416 NC_014150.1 1621728 1621988 D KEGG: bhy:BHWA1_01855 Hol; hypothetical protein 1621728..1621988 Brachyspira murdochii DSM 12563 9142403 YP_003633706.1 CDS Bmur_1417 NC_014150.1 1622006 1622353 D KEGG: bhy:BHWA1_01856 OrfG; hypothetical protein 1622006..1622353 Brachyspira murdochii DSM 12563 9142404 YP_003633707.1 CDS Bmur_1418 NC_014150.1 1622340 1622549 D KEGG: hya:HY04AAS1_0362 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1622340..1622549 Brachyspira murdochii DSM 12563 9142405 YP_003633708.1 CDS Bmur_1419 NC_014150.1 1622722 1624608 D KEGG: bhy:BHWA1_01857 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1622722..1624608 Brachyspira murdochii DSM 12563 9142406 YP_003633709.1 CDS Bmur_1420 NC_014150.1 1624881 1626731 D KEGG: bhy:BHWA1_01858 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1624881..1626731 Brachyspira murdochii DSM 12563 9142407 YP_003633710.1 CDS Bmur_1422 NC_014150.1 1627073 1628527 D KEGG: bhy:BHWA1_01734 GTP-binding protein; TIGRFAM: ribosome-associated GTPase EngA; small GTP- binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA 1627073..1628527 Brachyspira murdochii DSM 12563 9142409 YP_003633711.1 CDS Bmur_1423 NC_014150.1 1628517 1629179 D PFAM: protein of unknown function DUF205; KEGG: bhy:BHWA1_01735 predicted membrane protein; hypothetical protein 1628517..1629179 Brachyspira murdochii DSM 12563 9142410 YP_003633712.1 CDS Bmur_1424 NC_014150.1 1629315 1629731 D KEGG: bhy:BHWA1_01832 hypothetical protein; hypothetical protein 1629315..1629731 Brachyspira murdochii DSM 12563 9142411 YP_003633713.1 CDS Bmur_1425 NC_014150.1 1630091 1631590 D KEGG: ate:Athe_2404 hypothetical protein; hypothetical protein 1630091..1631590 Brachyspira murdochii DSM 12563 9142412 YP_003633714.1 CDS Bmur_1426 NC_014150.1 1631732 1632973 D KEGG: bhy:BHWA1_01838 Hvp 45 VSH-1 capsid protein; Hvp 45 VSH-1 capsid protein 1631732..1632973 Brachyspira murdochii DSM 12563 9142413 YP_003633715.1 CDS Bmur_1427 NC_014150.1 1633179 1633421 D KEGG: hypothetical protein; hypothetical protein 1633179..1633421 Brachyspira murdochii DSM 12563 9142414 YP_003633716.1 CDS Bmur_1428 NC_014150.1 1633427 1633816 D PFAM: protein of unknown function DUF955; KEGG: saf:SULAZ_1045 hypothetical protein; hypothetical protein 1633427..1633816 Brachyspira murdochii DSM 12563 9142415 YP_003633717.1 CDS Bmur_1430 NC_014150.1 1635667 1636035 D KEGG: bhy:BHWA1_01840 Hvp 13 VSH-1 associated protein 2; Hvp 13 VSH-1 associated protein 2 1635667..1636035 Brachyspira murdochii DSM 12563 9142417 YP_003633718.1 CDS Bmur_1431 NC_014150.1 1636304 1637347 D KEGG: bhy:BHWA1_01841 Hvp 38 VSH-1 associated protein 3; Hvp 38 VSH-1 associated protein 3 1636304..1637347 Brachyspira murdochii DSM 12563 9142418 YP_003633719.1 CDS Bmur_1432 NC_014150.1 1638010 1638306 D KEGG: bhy:BHWA1_01842 hypothetical protein; hypothetical protein 1638010..1638306 Brachyspira murdochii DSM 12563 9142419 YP_003633720.1 CDS Bmur_1433 NC_014150.1 1638370 1638753 D KEGG: bhy:BHWA1_01843 OrfB; hypothetical protein 1638370..1638753 Brachyspira murdochii DSM 12563 9142420 YP_003633721.1 CDS Bmur_1434 NC_014150.1 1638784 1639341 D KEGG: bhy:BHWA1_01844 Hvp 24 VSH-1 capsid protein; Hvp 24 VSH-1 capsid protein 1638784..1639341 Brachyspira murdochii DSM 12563 9142421 YP_003633722.1 CDS Bmur_1435 NC_014150.1 1639325 1639597 D KEGG: bhy:BHWA1_01845 hypothetical protein; hypothetical protein 1639325..1639597 Brachyspira murdochii DSM 12563 9142422 YP_003633723.1 CDS Bmur_1436 NC_014150.1 1639805 1641202 D KEGG: bhy:BHWA1_01846 Hvp 53 VSH-1 major tail protein; Hvp 53 VSH-1 major tail protein 1639805..1641202 Brachyspira murdochii DSM 12563 9142423 YP_003633724.1 CDS Bmur_1437 NC_014150.1 1641209 1641526 R KEGG: hypothetical protein; hypothetical protein complement(1641209..1641526) Brachyspira murdochii DSM 12563 9142424 YP_003633725.1 CDS Bmur_1438 NC_014150.1 1641869 1642225 D OrfE; KEGG: bhy:BHWA1_01848 OrfE; hypothetical protein 1641869..1642225 Brachyspira murdochii DSM 12563 9142425 YP_003633726.1 CDS Bmur_1439 NC_014150.1 1642234 1642527 D KEGG: bhy:BHWA1_01849 hypothetical protein; hypothetical protein 1642234..1642527 Brachyspira murdochii DSM 12563 9142426 YP_003633727.1 CDS Bmur_1440 NC_014150.1 1642583 1642897 D KEGG: similar to rCG32007; hypothetical protein 1642583..1642897 Brachyspira murdochii DSM 12563 9142427 YP_003633728.1 CDS Bmur_1441 NC_014150.1 1642974 1644122 D KEGG: bhy:BHWA1_01823 hypothetical protein; hypothetical protein 1642974..1644122 Brachyspira murdochii DSM 12563 9142428 YP_003633729.1 CDS Bmur_1442 NC_014150.1 1644413 1644964 D KEGG: bhy:BHWA1_01745 hypothetical protein; hypothetical protein 1644413..1644964 Brachyspira murdochii DSM 12563 9142429 YP_003633730.1 CDS Bmur_1443 NC_014150.1 1644988 1645530 D KEGG: bhy:BHWA1_01745 hypothetical protein; hypothetical protein 1644988..1645530 Brachyspira murdochii DSM 12563 9142430 YP_003633731.1 CDS Bmur_1444 NC_014150.1 1645608 1646444 R KEGG: bhy:BHWA1_01765 methylenetetrahydrofolate dehydrogenase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase complement(1645608..1646444) Brachyspira murdochii DSM 12563 9142431 YP_003633732.1 CDS Bmur_1445 NC_014150.1 1646538 1647734 D KEGG: bhy:BHWA1_01766 hypothetical protein; hypothetical protein 1646538..1647734 Brachyspira murdochii DSM 12563 9142432 YP_003633733.1 CDS Bmur_1446 NC_014150.1 1647807 1649219 D KEGG: bhy:BHWA1_01767 sodium:alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 1647807..1649219 Brachyspira murdochii DSM 12563 9142433 YP_003633734.1 CDS Bmur_1447 NC_014150.1 1649502 1649819 R KEGG: bhy:BHWA1_01812 hypothetical protein; hypothetical protein complement(1649502..1649819) Brachyspira murdochii DSM 12563 9142435 YP_003633735.1 CDS Bmur_1448 NC_014150.1 1650239 1651846 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01813 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein complement(1650239..1651846) Brachyspira murdochii DSM 12563 9142436 YP_003633736.1 CDS Bmur_1449 NC_014150.1 1652081 1652836 R KEGG: bhy:BHWA1_01740 imidazoleglycerol phosphate synthase; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; Imidazole glycerol phosphate synthase cyclase subunit complement(1652081..1652836) Brachyspira murdochii DSM 12563 9142437 YP_003633737.1 CDS Bmur_1450 NC_014150.1 1653422 1654183 D PFAM: ankyrin; KEGG: bhy:BHWA1_01790 ankyrin repeat-containing protein; ankyrin 1653422..1654183 Brachyspira murdochii DSM 12563 9142438 YP_003633738.1 CDS Bmur_1451 NC_014150.1 1654956 1655897 D KEGG: bhy:BHWA1_01834 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1654956..1655897 Brachyspira murdochii DSM 12563 9142439 YP_003633739.1 CDS Bmur_1453 NC_014150.1 1657182 1658216 D KEGG: bhy:BHWA1_01878 TPR domain-containing protein; hypothetical protein 1657182..1658216 Brachyspira murdochii DSM 12563 9142441 YP_003633740.1 CDS Bmur_1454 NC_014150.1 1658560 1659429 D KEGG: bhy:BHWA1_01880 hypothetical protein; hypothetical protein 1658560..1659429 Brachyspira murdochii DSM 12563 9142442 YP_003633741.1 CDS Bmur_1455 NC_014150.1 1659698 1660534 D KEGG: bhy:BHWA1_01879 hypothetical protein; hypothetical protein 1659698..1660534 Brachyspira murdochii DSM 12563 9142443 YP_003633742.1 CDS Bmur_1456 NC_014150.1 1660892 1661449 D KEGG: bhy:BHWA1_01882 hypothetical protein; hypothetical protein 1660892..1661449 Brachyspira murdochii DSM 12563 9142444 YP_003633743.1 CDS Bmur_1457 NC_014150.1 1661564 1662607 D KEGG: bhy:BHWA1_01865 ATPase; ATPase 1661564..1662607 Brachyspira murdochii DSM 12563 9142445 YP_003633744.1 CDS Bmur_1458 NC_014150.1 1662610 1663146 D KEGG: bhy:BHWA1_01866 hypothetical protein; hypothetical protein 1662610..1663146 Brachyspira murdochii DSM 12563 9142446 YP_003633745.1 CDS Bmur_1459 NC_014150.1 1663195 1665366 D PFAM: peptidase U32; KEGG: bhy:BHWA1_01867 peptidase/protease; peptidase U32 1663195..1665366 Brachyspira murdochii DSM 12563 9142447 YP_003633746.1 CDS Bmur_1460 NC_014150.1 1665486 1665833 R KEGG: bhy:BHWA1_00106 hypothetical protein; hypothetical protein complement(1665486..1665833) Brachyspira murdochii DSM 12563 9142448 YP_003633747.1 CDS Bmur_1461 NC_014150.1 1665929 1666045 R KEGG: bhy:BHWA1_01131 hypothetical protein; hypothetical protein complement(1665929..1666045) Brachyspira murdochii DSM 12563 9142449 YP_003633748.1 CDS Bmur_1462 NC_014150.1 1666091 1667665 R PFAM: arylsulfotransferase; KEGG: bhy:BHWA1_01792 arylsulfate sulfotransferase; arylsulfotransferase complement(1666091..1667665) Brachyspira murdochii DSM 12563 9142450 YP_003633749.1 CDS Bmur_1463 NC_014150.1 1668053 1668772 D PFAM: ankyrin; KEGG: bhy:BHWA1_00221 ankyrin repeat-containing protein; ankyrin 1668053..1668772 Brachyspira murdochii DSM 12563 9142451 YP_003633750.1 CDS Bmur_1464 NC_014150.1 1668908 1669129 D PFAM: ankyrin; KEGG: rme:Rmet_5600 ankyrin; ankyrin 1668908..1669129 Brachyspira murdochii DSM 12563 9142452 YP_003633751.1 CDS Bmur_1465 NC_014150.1 1669160 1669939 D KEGG: eel:EUBELI_01714 hypothetical protein; hypothetical protein 1669160..1669939 Brachyspira murdochii DSM 12563 9142453 YP_003633752.1 CDS Bmur_1466 NC_014150.1 1670088 1670270 D KEGG: hde:HDEF_0356 lytic murein transglycosylase C, membrane-bound; hypothetical protein 1670088..1670270 Brachyspira murdochii DSM 12563 9142454 YP_003633753.1 CDS Bmur_1467 NC_014150.1 1670615 1670995 D PFAM: protein of unknown function DUF1232; KEGG: bhy:BHWA1_01997 hypothetical protein; hypothetical protein 1670615..1670995 Brachyspira murdochii DSM 12563 9142455 YP_003633754.1 CDS Bmur_1468 NC_014150.1 1671024 1671431 D KEGG: bhy:BHWA1_01998 hypothetical protein; hypothetical protein 1671024..1671431 Brachyspira murdochii DSM 12563 9142456 YP_003633755.1 CDS Bmur_1469 NC_014150.1 1671995 1674403 D KEGG: bhy:BHWA1_01989 hypothetical protein; hypothetical protein 1671995..1674403 Brachyspira murdochii DSM 12563 9142457 YP_003633756.1 CDS Bmur_1470 NC_014150.1 1674978 1676576 D KEGG: bhy:BHWA1_01695 hypothetical protein; hypothetical protein 1674978..1676576 Brachyspira murdochii DSM 12563 9142458 YP_003633757.1 CDS Bmur_1471 NC_014150.1 1676587 1677543 D KEGG: azo:azo3589 glycosyltransferase; glycosyltransferase 1676587..1677543 Brachyspira murdochii DSM 12563 9142459 YP_003633758.1 CDS Bmur_1472 NC_014150.1 1677559 1678680 D KEGG: pin:Ping_0450 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1677559..1678680 Brachyspira murdochii DSM 12563 9142460 YP_003633759.1 CDS Bmur_1473 NC_014150.1 1678677 1679555 D KEGG: pin:Ping_0449 glycosyl transferase; hypothetical protein 1678677..1679555 Brachyspira murdochii DSM 12563 9142461 YP_003633760.1 CDS Bmur_1474 NC_014150.1 1679581 1680375 D KEGG: pin:Ping_0447 dolichyl-phosphate beta-D- mannosyltransferase; dolichyl-phosphate beta-D-mannosyltransferase 1679581..1680375 Brachyspira murdochii DSM 12563 9142462 YP_003633761.1 CDS Bmur_1475 NC_014150.1 1680393 1681505 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bhy:BHWA1_00926 oxidoreductase domain containing protein; oxidoreductase domain-containing protein 1680393..1681505 Brachyspira murdochii DSM 12563 9142463 YP_003633762.1 CDS Bmur_1476 NC_014150.1 1681498 1682433 D KEGG: rsq:Rsph17025_4042 hypothetical protein; hypothetical protein 1681498..1682433 Brachyspira murdochii DSM 12563 9142464 YP_003633763.1 CDS Bmur_1477 NC_014150.1 1682433 1683254 D PFAM: xylose isomerase domain protein TIM barrel; KEGG: dze:Dd1591_3407 xylose isomerase domain protein TIM barrel; xylose isomerase domain protein TIM barrel 1682433..1683254 Brachyspira murdochii DSM 12563 9142465 YP_003633764.1 CDS Bmur_1478 NC_014150.1 1683271 1684056 D PFAM: glycosyl transferase 2; KEGG: dze:Dd1591_3405 dolichyl-phosphate beta-D- mannosyltransferase; glycosyl transferase 1683271..1684056 Brachyspira murdochii DSM 12563 9142466 YP_003633765.1 CDS Bmur_1479 NC_014150.1 1684211 1684864 D TIGRFAM: transaldolase; KEGG: bhy:BHWA1_01968 transaldolase; PFAM: transaldolase; transaldolase 1684211..1684864 Brachyspira murdochii DSM 12563 9142467 YP_003633766.1 CDS Bmur_1480 NC_014150.1 1685564 1687555 R SMART: NAD-dependent DNA ligase ; Helix-hairpin- helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: bhy:BHWA1_01986 NAD-dependent DNA ligase LigA; PFAM: NAD-dependent DNA ligase adenylation; NAD- dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase complement(1685564..1687555) Brachyspira murdochii DSM 12563 9142468 YP_003633767.1 CDS Bmur_1481 NC_014150.1 1687593 1687787 R KEGG: hypothetical protein; hypothetical protein complement(1687593..1687787) Brachyspira murdochii DSM 12563 9142469 YP_003633768.1 CDS Bmur_1482 NC_014150.1 1687865 1688080 D KEGG: bhy:BHWA1_02009 hypothetical protein; hypothetical protein 1687865..1688080 Brachyspira murdochii DSM 12563 9142470 YP_003633769.1 CDS Bmur_1483 NC_014150.1 1688077 1688337 D KEGG: bhy:BHWA1_02010 RelE, cytotoxic translational repressor of toxin-antitoxin stability system; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 1688077..1688337 Brachyspira murdochii DSM 12563 9142471 YP_003633770.1 CDS Bmur_1484 NC_014150.1 1688506 1690269 R KEGG: bhy:BHWA1_01803 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase- type; aspartyl-tRNA synthetase complement(1688506..1690269) Brachyspira murdochii DSM 12563 9142472 YP_003633771.1 CDS Bmur_1485 NC_014150.1 1690421 1693279 R PFAM: SMC domain protein; KEGG: bhy:BHWA1_01898 chromosome partition protein SmC; SMC domain-containing protein complement(1690421..1693279) Brachyspira murdochii DSM 12563 9142473 YP_003633772.1 CDS Bmur_1486 NC_014150.1 1693894 1694313 D KEGG: bhy:BHWA1_01899 hypothetical protein; hypothetical protein 1693894..1694313 Brachyspira murdochii DSM 12563 9142474 YP_003633773.1 CDS Bmur_1487 NC_014150.1 1694623 1695531 R KEGG: bhy:BHWA1_00754 hypothetical protein; hypothetical protein complement(1694623..1695531) Brachyspira murdochii DSM 12563 9142475 YP_003633774.1 CDS Bmur_1488 NC_014150.1 1695796 1697775 R PFAM: UvrD/REP helicase; KEGG: bhy:BHWA1_01808 ATP-dependent DNA helicase; UvrD/REP helicase complement(1695796..1697775) Brachyspira murdochii DSM 12563 9142476 YP_003633775.1 CDS Bmur_1489 NC_014150.1 1698000 1699469 D SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: bhy:BHWA1_01876 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 1698000..1699469 Brachyspira murdochii DSM 12563 9142477 YP_003633776.1 CDS Bmur_1490 NC_014150.1 1699786 1703226 D KEGG: bhy:BHWA1_00014 molybdate metabolism regulator; molybdate metabolism regulator 1699786..1703226 Brachyspira murdochii DSM 12563 9142478 YP_003633777.1 CDS Bmur_1491 NC_014150.1 1703423 1703821 R KEGG: hypothetical protein; hypothetical protein complement(1703423..1703821) Brachyspira murdochii DSM 12563 9142479 YP_003633778.1 CDS Bmur_1492 NC_014150.1 1703835 1704188 R KEGG: lpc:LPC_1152 hypothetical protein; hypothetical protein complement(1703835..1704188) Brachyspira murdochii DSM 12563 9142480 YP_003633779.1 CDS Bmur_1493 NC_014150.1 1704387 1705010 R KEGG: conserved hypothetical protein; hypothetical protein complement(1704387..1705010) Brachyspira murdochii DSM 12563 9142481 YP_003633780.1 CDS Bmur_1494 NC_014150.1 1705097 1705288 R hypothetical protein complement(1705097..1705288) Brachyspira murdochii DSM 12563 9142482 YP_003633781.1 CDS Bmur_1495 NC_014150.1 1705829 1706941 R PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_01600 variable surface protein - VspE; serpulina hyodysenteriae variable surface protein complement(1705829..1706941) Brachyspira murdochii DSM 12563 9142483 YP_003633782.1 CDS Bmur_1496 NC_014150.1 1707233 1708630 D KEGG: bhy:BHWA1_01183 hypothetical protein; hypothetical protein 1707233..1708630 Brachyspira murdochii DSM 12563 9142484 YP_003633783.1 CDS Bmur_1497 NC_014150.1 1708851 1710131 R TIGRFAM: seryl-tRNA synthetase; KEGG: bhy:BHWA1_01617 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like; seryl-tRNA synthetase complement(1708851..1710131) Brachyspira murdochii DSM 12563 9142485 YP_003633784.1 CDS Bmur_1498 NC_014150.1 1710339 1711646 R KEGG: bhy:BHWA1_01625 Holliday junction resolvase helicase subunit-like ATPase; PFAM: ATPase AAA; SMART: AAA ATPase; ATPase AAA complement(1710339..1711646) Brachyspira murdochii DSM 12563 9142486 YP_003633785.1 CDS Bmur_1499 NC_014150.1 1711627 1712619 R KEGG: bhy:BHWA1_01626 hypothetical protein; hypothetical protein complement(1711627..1712619) Brachyspira murdochii DSM 12563 9142487 YP_003633786.1 CDS Bmur_1500 NC_014150.1 1712826 1714676 D KEGG: bhy:BHWA1_01627 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1712826..1714676 Brachyspira murdochii DSM 12563 9142488 YP_003633787.1 CDS Bmur_1501 NC_014150.1 1714974 1716575 D PFAM: flagellar hook-length control protein; KEGG: bhy:BHWA1_02001 flagellar hook-length control domain containing protein; flagellar hook-length control protein 1714974..1716575 Brachyspira murdochii DSM 12563 9142489 YP_003633788.1 CDS Bmur_1502 NC_014150.1 1716648 1717439 D PFAM: flagellar hook capping protein; KEGG: bhy:BHWA1_02000 flagellar hook capping protein; flagellar hook capping protein 1716648..1717439 Brachyspira murdochii DSM 12563 9142490 YP_003633789.1 CDS Bmur_1503 NC_014150.1 1717914 1718966 D KEGG: bhy:BHWA1_01748 ABC transport related protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; ABC transporter 1717914..1718966 Brachyspira murdochii DSM 12563 9142491 YP_003633790.1 CDS Bmur_1504 NC_014150.1 1718947 1719627 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_01749 binding-protein-dependent transport system, inner membrane component; binding-protein-dependent transport system inner membrane protein 1718947..1719627 Brachyspira murdochii DSM 12563 9142492 YP_003633791.1 CDS Bmur_1505 NC_014150.1 1719683 1720651 D KEGG: bhy:BHWA1_01750 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; L-lactate dehydrogenase 1719683..1720651 Brachyspira murdochii DSM 12563 9142493 YP_003633792.1 CDS Bmur_1506 NC_014150.1 1720743 1721543 D PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01751 BlpG, outer membrane lipoprotein; NLPA lipoprotein 1720743..1721543 Brachyspira murdochii DSM 12563 9142494 YP_003633793.1 CDS Bmur_1507 NC_014150.1 1721569 1722366 D PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01752 BlpF, outer membrane lipoprotein; NLPA lipoprotein 1721569..1722366 Brachyspira murdochii DSM 12563 9142495 YP_003633794.1 CDS Bmur_1508 NC_014150.1 1722384 1723181 D PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01753 BlpE, outer membrane lipoprotein; NLPA lipoprotein 1722384..1723181 Brachyspira murdochii DSM 12563 9142496 YP_003633795.1 CDS Bmur_1509 NC_014150.1 1723285 1724085 D PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01754 BmpB, outer membrane lipoprotein; NLPA lipoprotein 1723285..1724085 Brachyspira murdochii DSM 12563 9142497 YP_003633796.1 CDS Bmur_1510 NC_014150.1 1724240 1725049 D PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01754 BmpB, outer membrane lipoprotein; NLPA lipoprotein 1724240..1725049 Brachyspira murdochii DSM 12563 9142498 YP_003633797.1 CDS Bmur_1511 NC_014150.1 1725150 1726775 R PFAM: carboxylesterase type B; KEGG: carboxylesterase type B; carboxylesterase type B complement(1725150..1726775) Brachyspira murdochii DSM 12563 9142499 YP_003633798.1 CDS Bmur_1512 NC_014150.1 1727074 1727715 D KEGG: bhy:BHWA1_01948 hypothetical protein; hypothetical protein 1727074..1727715 Brachyspira murdochii DSM 12563 9142500 YP_003633799.1 CDS Bmur_1513 NC_014150.1 1727726 1728955 D PFAM: extracellular solute-binding protein family 1; KEGG: bhy:BHWA1_02375 spermidine/putrescine transport ATP-binding protein PotA; ABC transporter substrate-binding protein 1727726..1728955 Brachyspira murdochii DSM 12563 9142501 YP_003633800.1 CDS Bmur_1514 NC_014150.1 1729062 1729679 R PFAM: cyclase; KEGG: bhy:BHWA1_01949 cyclase; cyclase complement(1729062..1729679) Brachyspira murdochii DSM 12563 9142502 YP_003633801.1 CDS Bmur_1515 NC_014150.1 1729676 1730671 R KEGG: bhy:BHWA1_01950 integral membrane protein (PIN domain superfamily); PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: nucleotide binding protein PINc; twitching motility protein PilT complement(1729676..1730671) Brachyspira murdochii DSM 12563 9142503 YP_003633802.1 CDS Bmur_1516 NC_014150.1 1730761 1731336 R PFAM: transcription factor CarD; KEGG: bhy:BHWA1_01951 transcriptional regulator; CarD family transcriptional regulator complement(1730761..1731336) Brachyspira murdochii DSM 12563 9142504 YP_003633803.1 CDS Bmur_1517 NC_014150.1 1731511 1731606 R hypothetical protein complement(1731511..1731606) Brachyspira murdochii DSM 12563 9142505 YP_003633804.1 CDS Bmur_1518 NC_014150.1 1731633 1733126 R PFAM: sodium:neurotransmitter symporter; KEGG: bhy:BHWA1_01462 sodium dependant transporter; sodium:neurotransmitter symporter complement(1731633..1733126) Brachyspira murdochii DSM 12563 9142506 YP_003633805.1 CDS Bmur_1519 NC_014150.1 1733653 1734462 R KEGG: bhy:BHWA1_01881 hypothetical protein; hypothetical protein complement(1733653..1734462) Brachyspira murdochii DSM 12563 9142507 YP_003633806.1 CDS Bmur_1520 NC_014150.1 1734716 1735585 R KEGG: bhy:BHWA1_01880 hypothetical protein; hypothetical protein complement(1734716..1735585) Brachyspira murdochii DSM 12563 9142508 YP_003633807.1 CDS Bmur_1521 NC_014150.1 1736031 1737230 R KEGG: bhy:BHWA1_02028 bifunctional riboflavin biosynthesis protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(1736031..1737230) Brachyspira murdochii DSM 12563 9142509 YP_003633808.1 CDS Bmur_1522 NC_014150.1 1737304 1737957 R TIGRFAM: riboflavin synthase, alpha subunit; KEGG: bhy:BHWA1_02027 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha complement(1737304..1737957) Brachyspira murdochii DSM 12563 9142510 YP_003633809.1 CDS Bmur_1523 NC_014150.1 1738134 1739240 R TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bhy:BHWA1_02026 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD complement(1738134..1739240) Brachyspira murdochii DSM 12563 9142511 YP_003633810.1 CDS Bmur_1524 NC_014150.1 1739578 1740003 R KEGG: ngk:NGK_1958 very short patch repair endonuclease; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr complement(1739578..1740003) Brachyspira murdochii DSM 12563 9142512 YP_003633811.1 CDS Bmur_1525 NC_014150.1 1740022 1741185 R KEGG: coc:Coch_0821 hypothetical protein; hypothetical protein complement(1740022..1741185) Brachyspira murdochii DSM 12563 9142513 YP_003633812.1 CDS Bmur_1526 NC_014150.1 1741204 1742139 R KEGG: coc:Coch_0822 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(1741204..1742139) Brachyspira murdochii DSM 12563 9142514 YP_003633813.1 CDS Bmur_1527 NC_014150.1 1742288 1744228 R PFAM: fructose-16-bisphosphatase; KEGG: bhy:BHWA1_01708 fructose-1,6-bisphosphatase; fructose-16-bisphosphatase complement(1742288..1744228) Brachyspira murdochii DSM 12563 9142515 YP_003633814.1 CDS Bmur_1528 NC_014150.1 1744767 1745480 D KEGG: bhy:BHWA1_01714 hypothetical protein; hypothetical protein 1744767..1745480 Brachyspira murdochii DSM 12563 9142519 YP_003633815.1 CDS Bmur_1529 NC_014150.1 1745673 1746857 D KEGG: bhy:BHWA1_01978 hypothetical protein; hypothetical protein 1745673..1746857 Brachyspira murdochii DSM 12563 9142521 YP_003633816.1 CDS Bmur_1530 NC_014150.1 1746864 1748042 R KEGG: bhy:BHWA1_01717 abortive infection protein; abortive infection protein complement(1746864..1748042) Brachyspira murdochii DSM 12563 9142522 YP_003633817.1 CDS Bmur_1531 NC_014150.1 1748339 1749007 R KEGG: bhy:BHWA1_01747 hypothetical protein; hypothetical protein complement(1748339..1749007) Brachyspira murdochii DSM 12563 9142523 YP_003633818.1 CDS Bmur_1532 NC_014150.1 1749299 1751575 R KEGG: bhy:BHWA1_01746 ZntA, cation transport ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase complement(1749299..1751575) Brachyspira murdochii DSM 12563 9142524 YP_003633819.1 CDS Bmur_1533 NC_014150.1 1752382 1752777 D KEGG: bhy:BHWA1_01702 hypothetical protein; hypothetical protein 1752382..1752777 Brachyspira murdochii DSM 12563 9142525 YP_003633820.1 CDS Bmur_1534 NC_014150.1 1752900 1754072 D PFAM: peptidase M30, hyicolysin; KEGG: bhy:BHWA1_01703 hypothetical protein; peptidase M30, hyicolysin 1752900..1754072 Brachyspira murdochii DSM 12563 9142526 YP_003633821.1 CDS Bmur_1535 NC_014150.1 1754355 1756832 R SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: bhy:BHWA1_01721 ATP-dependent protease La; PFAM: ATPase AAA; peptidase S16 lon domain protein; ATP-dependent protease La complement(1754355..1756832) Brachyspira murdochii DSM 12563 9142527 YP_003633822.1 CDS Bmur_1536 NC_014150.1 1757696 1758292 R KEGG: bhy:BHWA1_01785 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; Sua5/YciO/YrdC/YwlC family protein complement(1757696..1758292) Brachyspira murdochii DSM 12563 9142528 YP_003633823.1 CDS Bmur_1537 NC_014150.1 1758299 1759321 R TIGRFAM: diguanylate cyclase; PFAM: response regulator receiver; GGDEF domain containing protein; KEGG: bhy:BHWA1_01784 response regulatory protein; SMART: response regulator receiver; response regulator receiver modulated diguanylate cyclase complement(1758299..1759321) Brachyspira murdochii DSM 12563 9142529 YP_003633824.1 CDS Bmur_1538 NC_014150.1 1759499 1760929 D KEGG: gyc:GYMC61_3383 hypothetical protein; hypothetical protein 1759499..1760929 Brachyspira murdochii DSM 12563 9142530 YP_003633825.1 CDS Bmur_1539 NC_014150.1 1760932 1761534 D KEGG: hypothetical protein; hypothetical protein 1760932..1761534 Brachyspira murdochii DSM 12563 9142531 YP_003633826.1 CDS Bmur_1540 NC_014150.1 1761624 1762982 D TIGRFAM: aspartate kinase; KEGG: bhy:BHWA1_01701 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase 1761624..1762982 Brachyspira murdochii DSM 12563 9142532 YP_003633827.1 CDS Bmur_1541 NC_014150.1 1763333 1764562 R PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_02257 cinnamyl-alcohol dehydrogenase ELI3-2 (cad); molecular chaperone GroES complement(1763333..1764562) Brachyspira murdochii DSM 12563 9142533 YP_003633828.1 CDS Bmur_1542 NC_014150.1 1764796 1766238 R PFAM: polysaccharide biosynthesis protein CapD; KEGG: bhy:BHWA1_01906 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD complement(1764796..1766238) Brachyspira murdochii DSM 12563 9142534 YP_003633829.1 CDS Bmur_1543 NC_014150.1 1767626 1768156 R TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: bhy:BHWA1_01908 hypoxanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(1767626..1768156) Brachyspira murdochii DSM 12563 9142535 YP_003633830.1 CDS Bmur_1544 NC_014150.1 1768370 1769389 R KEGG: bhy:BHWA1_01909 electron transfer flavoprotein alpha subunit; PFAM: electron transfer flavoprotein alpha/beta- subunit ; electron transfer flavoprotein alpha subunit; SMART: electron transfer flavoprotein alpha/beta- subunit; electron transfer flavoprotein alpha/beta- subunit complement(1768370..1769389) Brachyspira murdochii DSM 12563 9142536 YP_003633831.1 CDS Bmur_1545 NC_014150.1 1769422 1770207 R KEGG: bhy:BHWA1_01910 electron transfer flavoprotein beta subunit; PFAM: electron transfer flavoprotein alpha/beta- subunit; SMART: electron transfer flavoprotein alpha/beta- subunit; electron transfer flavoprotein alpha/beta- subunit complement(1769422..1770207) Brachyspira murdochii DSM 12563 9142537 YP_003633832.1 CDS Bmur_1546 NC_014150.1 1770244 1771389 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bhy:BHWA1_01911 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(1770244..1771389) Brachyspira murdochii DSM 12563 9142538 YP_003633833.1 CDS Bmur_1547 NC_014150.1 1771447 1772748 R KEGG: fnu:FN0814 propionate CoA-transferase; PFAM: coenzyme A transferase; SMART: coenzyme A transferase; coenzyme A transferase complement(1771447..1772748) Brachyspira murdochii DSM 12563 9142539 YP_003633834.1 CDS Bmur_1548 NC_014150.1 1773375 1773989 D PFAM: DivIVA family protein; KEGG: bhy:BHWA1_01912 V-type ATP synthase subunit E; DivIVA family protein 1773375..1773989 Brachyspira murdochii DSM 12563 9142540 YP_003633835.1 CDS Bmur_1549 NC_014150.1 1774001 1774840 D KEGG: bhy:BHWA1_01913 hypothetical protein; hypothetical protein 1774001..1774840 Brachyspira murdochii DSM 12563 9142541 YP_003633836.1 CDS Bmur_1550 NC_014150.1 1774854 1776617 D KEGG: bhy:BHWA1_01914 V-type ATP synthase subunit A; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; H(+)-transporting two-sector ATPase 1774854..1776617 Brachyspira murdochii DSM 12563 9142542 YP_003633837.1 CDS Bmur_1551 NC_014150.1 1776610 1777932 D PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: bhy:BHWA1_01915 V-type ATP synthase subunit B; H+transporting two-sector ATPase alpha/beta subunit 1776610..1777932 Brachyspira murdochii DSM 12563 9142543 YP_003633838.1 CDS Bmur_1552 NC_014150.1 1777954 1778553 D KEGG: bhy:BHWA1_01916 V-type ATP synthase subunit D; TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit; V-type ATPase subunit D 1777954..1778553 Brachyspira murdochii DSM 12563 9142544 YP_003633839.1 CDS Bmur_1553 NC_014150.1 1778550 1780418 D PFAM: V-type ATPase 116 kDa subunit; KEGG: bhy:BHWA1_01917 V-type ATP synthase subunit I; V-type ATPase 116 kDa subunit 1778550..1780418 Brachyspira murdochii DSM 12563 9142545 YP_003633840.1 CDS Bmur_1554 NC_014150.1 1780495 1780962 D PFAM: H+transporting two-sector ATPase C subunit; KEGG: bhy:BHWA1_01918 V-type ATP synthase subunit K; H+transporting two-sector ATPase subunit C 1780495..1780962 Brachyspira murdochii DSM 12563 9142546 YP_003633841.1 CDS Bmur_1555 NC_014150.1 1781655 1782704 D SMART: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bhy:BHWA1_01681 glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 1781655..1782704 Brachyspira murdochii DSM 12563 9142547 YP_003633842.1 CDS Bmur_1556 NC_014150.1 1782854 1784053 D KEGG: bhy:BHWA1_01680 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase 1782854..1784053 Brachyspira murdochii DSM 12563 9142548 YP_003633843.1 CDS Bmur_1557 NC_014150.1 1784347 1784739 D KEGG: bhy:BHWA1_01678 hypothetical protein; hypothetical protein 1784347..1784739 Brachyspira murdochii DSM 12563 9142549 YP_003633844.1 CDS Bmur_1558 NC_014150.1 1784807 1785319 D KEGG: bhy:BHWA1_01677 hypothetical protein; hypothetical protein 1784807..1785319 Brachyspira murdochii DSM 12563 9142550 YP_003633845.1 CDS Bmur_1559 NC_014150.1 1785312 1786499 D TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bhy:BHWA1_01676 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 1785312..1786499 Brachyspira murdochii DSM 12563 9142551 YP_003633846.1 CDS Bmur_1560 NC_014150.1 1786576 1789677 D KEGG: bhy:BHWA1_01743 ATP-dependent nuclease subunit B; ATP-dependent nuclease subunit B 1786576..1789677 Brachyspira murdochii DSM 12563 9142552 YP_003633847.1 CDS Bmur_1561 NC_014150.1 1789687 1791042 R PFAM: 5-methylcytosine restriction system component- like protein; KEGG: smu:SMU.1484c hypothetical protein; 5-methylcytosine restriction system component- like protein complement(1789687..1791042) Brachyspira murdochii DSM 12563 9142553 YP_003633848.1 CDS Bmur_1562 NC_014150.1 1791085 1792896 R KEGG: smu:SMU.1485c endonuclease; PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: AAA ATPase; ATPase AAA complement(1791085..1792896) Brachyspira murdochii DSM 12563 9142554 YP_003633849.1 CDS Bmur_1563 NC_014150.1 1793030 1794841 R KEGG: bhy:BHWA1_01905 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; GTP- binding protein LepA domain protein; elongation factor Tu domain 2 protein; elongation factor G domain protein; GTP-binding protein LepA complement(1793030..1794841) Brachyspira murdochii DSM 12563 9142555 YP_003633850.1 CDS Bmur_1564 NC_014150.1 1794942 1798346 R PFAM: restriction modification system DNA specificity domain; N-6 DNA methylase; KEGG: cff:CFF8240_1393 restriction and modification enzyme CjeI; restriction modification system DNA specificity domain-containing protein complement(1794942..1798346) Brachyspira murdochii DSM 12563 9142556 YP_003633851.1 CDS Bmur_1565 NC_014150.1 1798513 1799295 D KEGG: bhy:BHWA1_01904 amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 1798513..1799295 Brachyspira murdochii DSM 12563 9142557 YP_003633852.1 CDS Bmur_1566 NC_014150.1 1799398 1800159 D KEGG: bhy:BHWA1_01903 amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 1799398..1800159 Brachyspira murdochii DSM 12563 9142558 YP_003633853.1 CDS Bmur_1567 NC_014150.1 1800156 1801949 R PFAM: zinc finger SWIM domain protein; KEGG: bhy:BHWA1_01383 zinc finger SIM domain protein; zinc finger SWIM domain-containing protein complement(1800156..1801949) Brachyspira murdochii DSM 12563 9142559 YP_003633854.1 CDS Bmur_1568 NC_014150.1 1801966 1802625 R KEGG: mvu:Metvu_0114 hypothetical protein; hypothetical protein complement(1801966..1802625) Brachyspira murdochii DSM 12563 9142560 YP_003633855.1 CDS Bmur_1569 NC_014150.1 1802630 1803694 R KEGG: mvu:Metvu_0115 ATPase; ATPase complement(1802630..1803694) Brachyspira murdochii DSM 12563 9142561 YP_003633856.1 CDS Bmur_1570 NC_014150.1 1803848 1804786 R KEGG: bhy:BHWA1_01382 preprotein translocase; TIGRFAM: protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF complement(1803848..1804786) Brachyspira murdochii DSM 12563 9142562 YP_003633857.1 CDS Bmur_1571 NC_014150.1 1804859 1806370 R KEGG: bhy:BHWA1_01381 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD complement(1804859..1806370) Brachyspira murdochii DSM 12563 9142563 YP_003633858.1 CDS Bmur_1572 NC_014150.1 1806401 1806829 R KEGG: bhy:BHWA1_01380 preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC complement(1806401..1806829) Brachyspira murdochii DSM 12563 9142564 YP_003633859.1 CDS Bmur_1573 NC_014150.1 1807001 1807978 R KEGG: cco:CCC13826_1743 nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB complement(1807001..1807978) Brachyspira murdochii DSM 12563 9142565 YP_003633860.1 CDS Bmur_1574 NC_014150.1 1808025 1808735 R KEGG: cdl:CDR20291_1332 aliphatic sulfonates ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1808025..1808735) Brachyspira murdochii DSM 12563 9142566 YP_003633861.1 CDS Bmur_1575 NC_014150.1 1808725 1809525 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdf:CD2991 ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(1808725..1809525) Brachyspira murdochii DSM 12563 9142567 YP_003633862.1 CDS Bmur_1576 NC_014150.1 1809671 1810300 D KEGG: mno:Mnod_8422 hypothetical protein; hypothetical protein 1809671..1810300 Brachyspira murdochii DSM 12563 9142568 YP_003633863.1 CDS Bmur_1577 NC_014150.1 1810532 1810756 D KEGG: bhy:BHWA1_01377 hypothetical protein; hypothetical protein 1810532..1810756 Brachyspira murdochii DSM 12563 9142570 YP_003633864.1 CDS Bmur_1578 NC_014150.1 1810760 1811047 R KEGG: bhy:BHWA1_01376 hypothetical protein; hypothetical protein complement(1810760..1811047) Brachyspira murdochii DSM 12563 9142571 YP_003633865.1 CDS Bmur_1579 NC_014150.1 1811661 1814801 R PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_02039 acriflavin resistance protein; acriflavin resistance protein complement(1811661..1814801) Brachyspira murdochii DSM 12563 9142572 YP_003633866.1 CDS Bmur_1580 NC_014150.1 1814833 1816023 R KEGG: bhy:BHWA1_02038 membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(1814833..1816023) Brachyspira murdochii DSM 12563 9142573 YP_003633867.1 CDS Bmur_1581 NC_014150.1 1816034 1817398 R PFAM: outer membrane efflux protein; KEGG: bhy:BHWA1_02037 outer membrane protein; outer membrane efflux protein complement(1816034..1817398) Brachyspira murdochii DSM 12563 9142574 YP_003633868.1 CDS Bmur_1582 NC_014150.1 1817904 1818161 D KEGG: hypothetical protein; hypothetical protein 1817904..1818161 Brachyspira murdochii DSM 12563 9142575 YP_003633869.1 CDS Bmur_1583 NC_014150.1 1818247 1819074 R PFAM: SCP-like extracellular; KEGG: bhy:BHWA1_01489 SCP-like extracellular protein; hypothetical protein complement(1818247..1819074) Brachyspira murdochii DSM 12563 9142576 YP_003633870.1 CDS Bmur_1584 NC_014150.1 1819280 1820839 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bhy:BHWA1_01488 hypothetical protein; NAD-dependent epimerase/dehydratase 1819280..1820839 Brachyspira murdochii DSM 12563 9142577 YP_003633871.1 CDS Bmur_1585 NC_014150.1 1820867 1821814 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01487 hypothetical ferrotoxin domain protein; 4Fe-4S ferredoxin 1820867..1821814 Brachyspira murdochii DSM 12563 9142578 YP_003633872.1 CDS Bmur_1586 NC_014150.1 1821907 1822839 D KEGG: bhy:BHWA1_01486 hypothetical protein; hypothetical protein 1821907..1822839 Brachyspira murdochii DSM 12563 9142579 YP_003633873.1 CDS Bmur_1587 NC_014150.1 1823201 1824439 R KEGG: bhy:BHWA1_01521 hypothetical protein; hypothetical protein complement(1823201..1824439) Brachyspira murdochii DSM 12563 9142580 YP_003633874.1 CDS Bmur_1588 NC_014150.1 1824608 1826209 D PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01522 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 1824608..1826209 Brachyspira murdochii DSM 12563 9142581 YP_003633875.1 CDS Bmur_1589 NC_014150.1 1826551 1827201 R KEGG: viral A-type inclusion protein; hypothetical protein complement(1826551..1827201) Brachyspira murdochii DSM 12563 9142582 YP_003633876.1 CDS Bmur_1590 NC_014150.1 1827369 1828961 D PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01524 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 1827369..1828961 Brachyspira murdochii DSM 12563 9142583 YP_003633877.1 CDS Bmur_1591 NC_014150.1 1829232 1829834 R KEGG: bhy:BHWA1_01634 segregation and condesation protein B; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; chromosome segregation and condensation protein ScpB complement(1829232..1829834) Brachyspira murdochii DSM 12563 9142584 YP_003633878.1 CDS Bmur_1592 NC_014150.1 1830502 1830981 D KEGG: bhy:BHWA1_02052 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein 1830502..1830981 Brachyspira murdochii DSM 12563 9142585 YP_003633879.1 CDS Bmur_1593 NC_014150.1 1830987 1831265 R KEGG: bhy:BHWA1_02053 hypothetical protein; hypothetical protein complement(1830987..1831265) Brachyspira murdochii DSM 12563 9142586 YP_003633880.1 CDS Bmur_1594 NC_014150.1 1831278 1832456 R KEGG: bhy:BHWA1_02054 hypothetical protein; hypothetical protein complement(1831278..1832456) Brachyspira murdochii DSM 12563 9142587 YP_003633881.1 CDS Bmur_1595 NC_014150.1 1832703 1832969 R KEGG: bhy:BHWA1_02055 co-chaperonin GroES; PFAM: chaperonin Cpn10; SMART: chaperonin Cpn10; chaperonin Cpn10 complement(1832703..1832969) Brachyspira murdochii DSM 12563 9142588 YP_003633882.1 CDS Bmur_1596 NC_014150.1 1833068 1833580 R KEGG: bhy:BHWA1_02056 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase complement(1833068..1833580) Brachyspira murdochii DSM 12563 9142589 YP_003633883.1 CDS Bmur_1597 NC_014150.1 1833673 1835055 R KEGG: bhy:BHWA1_01621 Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(1833673..1835055) Brachyspira murdochii DSM 12563 9142590 YP_003633884.1 CDS Bmur_1598 NC_014150.1 1835398 1835847 D KEGG: lmh:LMHCC_1999 Rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 1835398..1835847 Brachyspira murdochii DSM 12563 9142591 YP_003633885.1 CDS Bmur_1599 NC_014150.1 1835860 1837509 D KEGG: cpr:CPR_1120 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane; hybrid cluster protein 1835860..1837509 Brachyspira murdochii DSM 12563 9142592 YP_003633886.1 CDS Bmur_1600 NC_014150.1 1838113 1839036 R KEGG: bhy:BHWA1_01512 thermonuclease; thermonuclease complement(1838113..1839036) Brachyspira murdochii DSM 12563 9142593 YP_003633887.1 CDS Bmur_1601 NC_014150.1 1839000 1839704 R TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: bhy:BHWA1_01513 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(1839000..1839704) Brachyspira murdochii DSM 12563 9142594 YP_003633888.1 CDS Bmur_1602 NC_014150.1 1839911 1841515 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02059 oligopeptide ABC transporter periplasmic subunit; ABC transporter substrate-binding protein complement(1839911..1841515) Brachyspira murdochii DSM 12563 9142595 YP_003633889.1 CDS Bmur_1603 NC_014150.1 1841866 1844280 R KEGG: bhy:BHWA1_01941 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein; hypothetical protein complement(1841866..1844280) Brachyspira murdochii DSM 12563 9142596 YP_003633890.1 CDS Bmur_1604 NC_014150.1 1844565 1844798 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01942 ferredoxin; 4Fe-4S ferredoxin 1844565..1844798 Brachyspira murdochii DSM 12563 9142597 YP_003633891.1 CDS Bmur_1605 NC_014150.1 1844799 1845854 D PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: bhy:BHWA1_01943 2-ketoisovalerate ferredoxin reductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1844799..1845854 Brachyspira murdochii DSM 12563 9142598 YP_003633892.1 CDS Bmur_1606 NC_014150.1 1845851 1846585 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bhy:BHWA1_01944 thiamine pyrophosphate; thiamine pyrophosphate domain-containing TPP-binding protein 1845851..1846585 Brachyspira murdochii DSM 12563 9142599 YP_003633893.1 CDS Bmur_1607 NC_014150.1 1846599 1847153 D KEGG: bhy:BHWA1_01945 pyruvate ferredoxin oxireductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate/ketoisovalerate oxidoreductase; pyruvate/ketoisovalerate oxidoreductase subunit gamma 1846599..1847153 Brachyspira murdochii DSM 12563 9142600 YP_003633894.1 CDS Bmur_1608 NC_014150.1 1847419 1848339 D KEGG: bhy:BHWA1_01653 hypothetical protein; hypothetical protein 1847419..1848339 Brachyspira murdochii DSM 12563 9142601 YP_003633895.1 CDS Bmur_1610 NC_014150.1 1849512 1850642 D PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_01601 variable surface protein - VspF; serpulina hyodysenteriae variable surface protein 1849512..1850642 Brachyspira murdochii DSM 12563 9142603 YP_003633896.1 CDS Bmur_1611 NC_014150.1 1851034 1851990 D KEGG: bhy:BHWA1_01298 hypothetical protein; hypothetical protein 1851034..1851990 Brachyspira murdochii DSM 12563 9142604 YP_003633897.1 CDS Bmur_1612 NC_014150.1 1852077 1852628 D KEGG: bhy:BHWA1_01654 hypothetical protein; hypothetical protein 1852077..1852628 Brachyspira murdochii DSM 12563 9142605 YP_003633898.1 CDS Bmur_1613 NC_014150.1 1852888 1854801 D KEGG: bhy:BHWA1_01652 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein FlgK 1852888..1854801 Brachyspira murdochii DSM 12563 9142606 YP_003633899.1 CDS Bmur_1614 NC_014150.1 1855053 1857887 D KEGG: bhy:BHWA1_01651 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1855053..1857887 Brachyspira murdochii DSM 12563 9142607 YP_003633900.1 CDS Bmur_1615 NC_014150.1 1858049 1859113 D KEGG: bhy:BHWA1_01658 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 1858049..1859113 Brachyspira murdochii DSM 12563 9142608 YP_003633901.1 CDS Bmur_1616 NC_014150.1 1859110 1860375 R PFAM: peptidase M16 domain protein; KEGG: bhy:BHWA1_02046 Zn-dependent peptidase; peptidase M16 domain-containing protein complement(1859110..1860375) Brachyspira murdochii DSM 12563 9142609 YP_003633902.1 CDS Bmur_1617 NC_014150.1 1860476 1862989 R KEGG: bhy:BHWA1_02036 hypothetical protein; hypothetical protein complement(1860476..1862989) Brachyspira murdochii DSM 12563 9142610 YP_003633903.1 CDS Bmur_1618 NC_014150.1 1863007 1864059 R KEGG: bhy:BHWA1_01192 adenine-specific methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; adenine-specific DNA-methyltransferase complement(1863007..1864059) Brachyspira murdochii DSM 12563 9142611 YP_003633904.1 CDS Bmur_1619 NC_014150.1 1864198 1864503 R KEGG: hypothetical protein; hypothetical protein complement(1864198..1864503) Brachyspira murdochii DSM 12563 9142612 YP_003633905.1 CDS Bmur_1620 NC_014150.1 1864503 1864898 R KEGG: hypothetical protein; hypothetical protein complement(1864503..1864898) Brachyspira murdochii DSM 12563 9142613 YP_003633906.1 CDS Bmur_1621 NC_014150.1 1865513 1867789 R KEGG: bhy:BHWA1_02071 hypothetical protein; hypothetical protein complement(1865513..1867789) Brachyspira murdochii DSM 12563 9142614 YP_003633907.1 CDS Bmur_1622 NC_014150.1 1867822 1868754 R KEGG: bhy:BHWA1_02070 site-specific recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase; integrase domain protein SAM domain protein; tyrosine recombinase XerD complement(1867822..1868754) Brachyspira murdochii DSM 12563 9142615 YP_003633908.1 CDS Bmur_1623 NC_014150.1 1868978 1869979 D PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_02069 histidinol-phosphate aminotransferase; class I and II aminotransferase 1868978..1869979 Brachyspira murdochii DSM 12563 9142616 YP_003633909.1 CDS Bmur_1624 NC_014150.1 1870086 1870469 D KEGG: bhy:BHWA1_01619 hypothetical protein; hypothetical protein 1870086..1870469 Brachyspira murdochii DSM 12563 9142617 YP_003633910.1 CDS Bmur_1625 NC_014150.1 1870492 1871145 D KEGG: bhy:BHWA1_01620 hypothetical protein; hypothetical protein 1870492..1871145 Brachyspira murdochii DSM 12563 9142618 YP_003633911.1 CDS Bmur_1626 NC_014150.1 1871294 1872004 D KEGG: bhy:BHWA1_01954 hypothetical protein; hypothetical protein 1871294..1872004 Brachyspira murdochii DSM 12563 9142619 YP_003633912.1 CDS Bmur_1627 NC_014150.1 1872123 1872374 D KEGG: bhy:BHWA1_01971 hypothetical protein; hypothetical protein 1872123..1872374 Brachyspira murdochii DSM 12563 9142620 YP_003633913.1 CDS Bmur_1628 NC_014150.1 1872626 1873558 D KEGG: bhy:BHWA1_01972 hypothetical protein; hypothetical protein 1872626..1873558 Brachyspira murdochii DSM 12563 9142621 YP_003633914.1 CDS Bmur_1629 NC_014150.1 1873705 1874607 D KEGG: bhy:BHWA1_01973 nicotinamidase; nicotinamidase 1873705..1874607 Brachyspira murdochii DSM 12563 9142622 YP_003633915.1 CDS Bmur_1630 NC_014150.1 1874899 1875864 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: bhy:BHWA1_01586 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; 3-oxoacyl-ACP synthase complement(1874899..1875864) Brachyspira murdochii DSM 12563 9142623 YP_003633916.1 CDS Bmur_1631 NC_014150.1 1876432 1877853 R KEGG: bhy:BHWA1_01585 hypothetical protein; hypothetical protein complement(1876432..1877853) Brachyspira murdochii DSM 12563 9142624 YP_003633917.1 CDS Bmur_1632 NC_014150.1 1877948 1878646 R PFAM: protein of unknown function DUF45; KEGG: bhy:BHWA1_01584 predicted metal-dependent hydrolase; hypothetical protein complement(1877948..1878646) Brachyspira murdochii DSM 12563 9142625 YP_003633918.1 CDS Bmur_1633 NC_014150.1 1879006 1880844 D KEGG: bhy:BHWA1_01583 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1879006..1880844 Brachyspira murdochii DSM 12563 9142626 YP_003633919.1 CDS Bmur_1634 NC_014150.1 1880934 1881608 R PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bhy:BHWA1_02109 tetrapyrrole (corrin/porphyrin) methylase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase complement(1880934..1881608) Brachyspira murdochii DSM 12563 9142627 YP_003633920.1 CDS Bmur_1635 NC_014150.1 1881647 1882681 R KEGG: bhy:BHWA1_02108 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase 2; SMART: N-acetylmuramoyl-L-alanine amidase 2; N-acetylmuramoyl-L-alanine amidase complement(1881647..1882681) Brachyspira murdochii DSM 12563 9142628 YP_003633921.1 CDS Bmur_1636 NC_014150.1 1882674 1884002 R KEGG: bhy:BHWA1_02107 hypothetical protein; hypothetical protein complement(1882674..1884002) Brachyspira murdochii DSM 12563 9142629 YP_003633922.1 CDS Bmur_1637 NC_014150.1 1884112 1884765 R KEGG: protein serine/threonine kinase; hypothetical protein complement(1884112..1884765) Brachyspira murdochii DSM 12563 9142630 YP_003633923.1 CDS Bmur_1638 NC_014150.1 1884981 1886345 D KEGG: bhy:BHWA1_02105 membrane associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; zinc metalloprotease 1884981..1886345 Brachyspira murdochii DSM 12563 9142631 YP_003633924.1 CDS Bmur_1639 NC_014150.1 1886541 1888952 D KEGG: bhy:BHWA1_02102 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1886541..1888952 Brachyspira murdochii DSM 12563 9142632 YP_003633925.1 CDS Bmur_1640 NC_014150.1 1888984 1889277 D PFAM: Protein of unknown function DUF2314; KEGG: bcx:BCA_2465 hypothetical protein; hypothetical protein 1888984..1889277 Brachyspira murdochii DSM 12563 9142633 YP_003633926.1 CDS Bmur_1641 NC_014150.1 1889301 1890179 R KEGG: bhy:BHWA1_01628 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(1889301..1890179) Brachyspira murdochii DSM 12563 9142634 YP_003633927.1 CDS Bmur_1642 NC_014150.1 1890334 1891485 D PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_01519 alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1890334..1891485 Brachyspira murdochii DSM 12563 9142635 YP_003633928.1 CDS Bmur_1643 NC_014150.1 1891482 1892345 R KEGG: bhy:BHWA1_01518 exonuclease; exonuclease complement(1891482..1892345) Brachyspira murdochii DSM 12563 9142636 YP_003633929.1 CDS Bmur_1644 NC_014150.1 1892375 1893793 R SMART: Cysteinyl-tRNA synthetase class Ia DALR; TIGRFAM: cysteinyl-tRNA synthetase; KEGG: bhy:BHWA1_01517 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; cysteinyl-tRNA synthetase complement(1892375..1893793) Brachyspira murdochii DSM 12563 9142637 YP_003633930.1 CDS Bmur_1645 NC_014150.1 1894008 1894103 R hypothetical protein complement(1894008..1894103) Brachyspira murdochii DSM 12563 9142638 YP_003633931.1 CDS Bmur_1646 NC_014150.1 1894142 1894732 R KEGG: bhy:BHWA1_01516 hypothetical protein; hypothetical protein complement(1894142..1894732) Brachyspira murdochii DSM 12563 9142639 YP_003633932.1 CDS Bmur_1647 NC_014150.1 1894822 1895724 R KEGG: bhy:BHWA1_01529 esterase; esterase complement(1894822..1895724) Brachyspira murdochii DSM 12563 9142640 YP_003633933.1 CDS Bmur_1648 NC_014150.1 1895741 1896409 R KEGG: bhy:BHWA1_01530 hypothetical protein; hypothetical protein complement(1895741..1896409) Brachyspira murdochii DSM 12563 9142641 YP_003633934.1 CDS Bmur_1649 NC_014150.1 1896411 1897685 R KEGG: bhy:BHWA1_01531 hypothetical protein; hypothetical protein complement(1896411..1897685) Brachyspira murdochii DSM 12563 9142642 YP_003633935.1 CDS Bmur_1650 NC_014150.1 1897967 1898710 D PFAM: protein of unknown function DUF28; KEGG: bhy:BHWA1_01533 hypothetical protein; hypothetical protein 1897967..1898710 Brachyspira murdochii DSM 12563 9142643 YP_003633936.1 CDS Bmur_1651 NC_014150.1 1898728 1899201 D TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: bhy:BHWA1_01534 crossover junction endodeoxyribonuclease; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1898728..1899201 Brachyspira murdochii DSM 12563 9142644 YP_003633937.1 CDS Bmur_1652 NC_014150.1 1899880 1901730 D KEGG: bhy:BHWA1_01637 tRNA uridine 5- carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A 1899880..1901730 Brachyspira murdochii DSM 12563 9142645 YP_003633938.1 CDS Bmur_1653 NC_014150.1 1902241 1904517 D PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; KEGG: bhy:BHWA1_01633 TPR domain-containing protein; hypothetical protein 1902241..1904517 Brachyspira murdochii DSM 12563 9142646 YP_003633939.1 CDS Bmur_1654 NC_014150.1 1905060 1905647 D KEGG: bhy:BHWA1_02073 hypothetical protein; hypothetical protein 1905060..1905647 Brachyspira murdochii DSM 12563 9142647 YP_003633940.1 CDS Bmur_1655 NC_014150.1 1906213 1907667 R TIGRFAM: metal dependent phophohydrolase; KEGG: bhy:BHWA1_02074 hypothetical protein; metal dependent phosphohydrolase complement(1906213..1907667) Brachyspira murdochii DSM 12563 9142649 YP_003633941.1 CDS Bmur_1656 NC_014150.1 1907743 1908117 R PFAM: protein of unknown function UPF0153; KEGG: bhy:BHWA1_02075 hypothetical protein; hypothetical protein complement(1907743..1908117) Brachyspira murdochii DSM 12563 9142650 YP_003633942.1 CDS Bmur_1657 NC_014150.1 1908169 1910811 R KEGG: bhy:BHWA1_02076 hypothetical protein; hypothetical protein complement(1908169..1910811) Brachyspira murdochii DSM 12563 9142651 YP_003633943.1 CDS Bmur_1658 NC_014150.1 1910816 1911556 R KEGG: bhy:BHWA1_02077 hypothetical protein; hypothetical protein complement(1910816..1911556) Brachyspira murdochii DSM 12563 9142652 YP_003633944.1 CDS Bmur_1659 NC_014150.1 1914135 1914461 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_02096 cupin 2, conserved barrel domain protein; cupin 1914135..1914461 Brachyspira murdochii DSM 12563 9142654 YP_003633945.1 CDS Bmur_1660 NC_014150.1 1914468 1915331 D TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; KEGG: bhy:BHWA1_02097 modification methylase, HemK family; protein-(glutamine-N5) methyltransferase 1914468..1915331 Brachyspira murdochii DSM 12563 9142655 YP_003633946.1 CDS Bmur_1661 NC_014150.1 1915537 1916307 D KEGG: bhy:BHWA1_02099 hydrolase (HAD superfamily); TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; HAD-superfamily hydrolase 1915537..1916307 Brachyspira murdochii DSM 12563 9142656 YP_003633947.1 CDS Bmur_1662 NC_014150.1 1916713 1917705 R KEGG: bhy:BHWA1_01537 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase complement(1916713..1917705) Brachyspira murdochii DSM 12563 9142657 YP_003633948.1 CDS Bmur_1663 NC_014150.1 1918094 1919896 R PFAM: Lipoprotein LpqB, GerMN domain; KEGG: bhy:BHWA1_01526 hypothetical protein; Lipoprotein LpqB, GerMN domain-containing protein complement(1918094..1919896) Brachyspira murdochii DSM 12563 9142658 YP_003633949.1 CDS Bmur_1664 NC_014150.1 1920182 1921216 R KEGG: bhy:BHWA1_01436 SpsE, sialic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; N-acylneuraminate-9-phosphate synthase complement(1920182..1921216) Brachyspira murdochii DSM 12563 9142659 YP_003633950.1 CDS Bmur_1665 NC_014150.1 1921522 1923843 R PFAM: protein of unknown function DUF214; KEGG: bhy:BHWA1_01433 permease; hypothetical protein complement(1921522..1923843) Brachyspira murdochii DSM 12563 9142661 YP_003633951.1 CDS Bmur_1666 NC_014150.1 1923866 1924573 R KEGG: bhy:BHWA1_01432 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1923866..1924573) Brachyspira murdochii DSM 12563 9142662 YP_003633952.1 CDS Bmur_1667 NC_014150.1 1924603 1925799 R TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: bhy:BHWA1_01431 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase complement(1924603..1925799) Brachyspira murdochii DSM 12563 9142663 YP_003633953.1 CDS Bmur_1668 NC_014150.1 1926222 1927175 D PFAM: PhoH family protein; KEGG: bhy:BHWA1_01430 phosphate starvation- inducible (PhoH)-like protein; PhoH family protein 1926222..1927175 Brachyspira murdochii DSM 12563 9142664 YP_003633954.1 CDS Bmur_1669 NC_014150.1 1927210 1929681 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bhy:BHWA1_01429 metal-dependant phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1927210..1929681 Brachyspira murdochii DSM 12563 9142665 YP_003633955.1 CDS Bmur_1670 NC_014150.1 1929681 1930118 D PFAM: protein of unknown function UPF0054; KEGG: bhy:BHWA1_01428 metal-dependent hydrolase; hypothetical protein 1929681..1930118 Brachyspira murdochii DSM 12563 9142666 YP_003633956.1 CDS Bmur_1671 NC_014150.1 1930132 1930953 D PFAM: CBS domain containing protein; transporter- associated region; KEGG: bhy:BHWA1_01427 hemolysin C; hypothetical protein 1930132..1930953 Brachyspira murdochii DSM 12563 9142667 YP_003633957.1 CDS Bmur_1672 NC_014150.1 1931253 1932935 D KEGG: bhy:BHWA1_01661 hypothetical protein; hypothetical protein 1931253..1932935 Brachyspira murdochii DSM 12563 9142668 YP_003633958.1 CDS Bmur_1673 NC_014150.1 1934197 1935321 R PFAM: integrase; integrase domain protein SAM domain protein; KEGG: coc:Coch_1556 integrase; integrase complement(1934197..1935321) Brachyspira murdochii DSM 12563 9142669 YP_003633959.1 CDS Bmur_1674 NC_014150.1 1935556 1935780 R KEGG: ote:Oter_2697 hypothetical protein; hypothetical protein complement(1935556..1935780) Brachyspira murdochii DSM 12563 9142670 YP_003633960.1 CDS Bmur_1675 NC_014150.1 1935930 1936139 R KEGG: crp:CRP_182 hypothetical protein; hypothetical protein complement(1935930..1936139) Brachyspira murdochii DSM 12563 9142671 YP_003633961.1 CDS Bmur_1676 NC_014150.1 1936154 1938037 R KEGG: bhy:BHWA1_01851 Hvp 101 VSH-1 tail protein; hypothetical protein complement(1936154..1938037) Brachyspira murdochii DSM 12563 9142672 YP_003633962.1 CDS Bmur_1677 NC_014150.1 1938119 1938658 R KEGG: hypothetical protein; hypothetical protein complement(1938119..1938658) Brachyspira murdochii DSM 12563 9142673 YP_003633963.1 CDS Bmur_1678 NC_014150.1 1938796 1939233 R KEGG: viral A-type inclusion protein; hypothetical protein complement(1938796..1939233) Brachyspira murdochii DSM 12563 9142674 YP_003633964.1 CDS Bmur_1679 NC_014150.1 1939235 1939828 R PFAM: glycoside hydrolase 19; KEGG: bhy:BHWA1_01853 Lys - endolysin; glycoside hydrolase; glycoside hydrolase 19 complement(1939235..1939828) Brachyspira murdochii DSM 12563 9142675 YP_003633965.1 CDS Bmur_1680 NC_014150.1 1939832 1940176 R KEGG: pmx:PERMA_1019 zinc ribbon domain family; hypothetical protein complement(1939832..1940176) Brachyspira murdochii DSM 12563 9142676 YP_003633966.1 CDS Bmur_1681 NC_014150.1 1940250 1940639 R PFAM: Sigma-70 region 4 type 2; KEGG: bhy:BHWA1_00983 hypothetical protein; response regulator receiver protein complement(1940250..1940639) Brachyspira murdochii DSM 12563 9142677 YP_003633967.1 CDS Bmur_1683 NC_014150.1 1940847 1942790 R KEGG: hypothetical protein; hypothetical protein complement(1940847..1942790) Brachyspira murdochii DSM 12563 9142679 YP_003633968.1 CDS Bmur_1684 NC_014150.1 1942803 1943921 R KEGG: mmi:MMAR_2102 PE-PGRS family protein; hypothetical protein complement(1942803..1943921) Brachyspira murdochii DSM 12563 9142680 YP_003633969.1 CDS Bmur_1685 NC_014150.1 1943924 1944376 R KEGG: bhy:BHWA1_01147 hypothetical protein; hypothetical protein complement(1943924..1944376) Brachyspira murdochii DSM 12563 9142681 YP_003633970.1 CDS Bmur_1686 NC_014150.1 1944376 1945272 R KEGG: mmy:MSC_0285 prolipoprotein; hypothetical protein complement(1944376..1945272) Brachyspira murdochii DSM 12563 9142682 YP_003633971.1 CDS Bmur_1687 NC_014150.1 1945269 1948739 R KEGG: hau:Haur_1369 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family complement(1945269..1948739) Brachyspira murdochii DSM 12563 9142683 YP_003633972.1 CDS Bmur_1688 NC_014150.1 1948829 1949017 R KEGG: hypothetical protein; hypothetical protein complement(1948829..1949017) Brachyspira murdochii DSM 12563 9142684 YP_003633973.1 CDS Bmur_1689 NC_014150.1 1949083 1949430 R KEGG: hypothetical protein; hypothetical protein complement(1949083..1949430) Brachyspira murdochii DSM 12563 9142685 YP_003633974.1 CDS Bmur_1690 NC_014150.1 1949442 1950845 R KEGG: mac:MA3808 hypothetical protein; hypothetical protein complement(1949442..1950845) Brachyspira murdochii DSM 12563 9142686 YP_003633975.1 CDS Bmur_1691 NC_014150.1 1950880 1951251 R KEGG: conserved hypothetical protein; hypothetical protein complement(1950880..1951251) Brachyspira murdochii DSM 12563 9142687 YP_003633976.1 CDS Bmur_1692 NC_014150.1 1951263 1951721 R TIGRFAM: phage protein, HK97 gp10 family; KEGG: ATP-dependent RNA helicase; phage protein, HK97 gp10 family complement(1951263..1951721) Brachyspira murdochii DSM 12563 9142688 YP_003633977.1 CDS Bmur_1693 NC_014150.1 1951723 1952076 R TIGRFAM: phage head-tail adaptor; KEGG: cby:CLM_3411 DNA polymerase I; phage head-tail adaptor complement(1951723..1952076) Brachyspira murdochii DSM 12563 9142689 YP_003633978.1 CDS Bmur_1694 NC_014150.1 1952144 1952584 R TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: rsp:RSP_6247 phage-related protein, DNA packing; phage protein complement(1952144..1952584) Brachyspira murdochii DSM 12563 9142690 YP_003633979.1 CDS Bmur_1695 NC_014150.1 1952609 1953892 R KEGG: lga:LGAS_1485 phage phi-C31 GP36 major capsid- like protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; phage major capsid protein, HK97 family complement(1952609..1953892) Brachyspira murdochii DSM 12563 9142691 YP_003633980.1 CDS Bmur_1696 NC_014150.1 1953912 1954574 R KEGG: efa:EF2821 prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; phage prohead protease, HK97 family complement(1953912..1954574) Brachyspira murdochii DSM 12563 9142692 YP_003633981.1 CDS Bmur_1697 NC_014150.1 1954561 1955838 R KEGG: det:DET1087 HK97 family portal protein , TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family complement(1954561..1955838) Brachyspira murdochii DSM 12563 9142693 YP_003633982.1 CDS Bmur_1698 NC_014150.1 1955968 1956366 D KEGG: pmr:PMI0923 phage terminase, small subunit; phage terminase small subunit 1955968..1956366 Brachyspira murdochii DSM 12563 9142694 YP_003633983.1 CDS Bmur_1699 NC_014150.1 1956375 1958147 D PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase; terminase 1956375..1958147 Brachyspira murdochii DSM 12563 9142695 YP_003633984.1 CDS Bmur_1700 NC_014150.1 1958657 1958863 D PFAM: Protein of unknown function DUF1778; KEGG: nmu:Nmul_B2796 mobilization protein; hypothetical protein 1958657..1958863 Brachyspira murdochii DSM 12563 9142696 YP_003633985.1 CDS Bmur_1701 NC_014150.1 1958927 1960945 D KEGG: fps:FP1554 hypothetical protein; hypothetical protein 1958927..1960945 Brachyspira murdochii DSM 12563 9142697 YP_003633986.1 CDS Bmur_1702 NC_014150.1 1960992 1962851 D KEGG: bcm:Bcenmc03_7078 hypothetical protein; hypothetical protein 1960992..1962851 Brachyspira murdochii DSM 12563 9142698 YP_003633987.1 CDS Bmur_1703 NC_014150.1 1962924 1963052 R KEGG: hut:Huta_2286 hypothetical protein; hypothetical protein complement(1962924..1963052) Brachyspira murdochii DSM 12563 9142699 YP_003633988.1 CDS Bmur_1704 NC_014150.1 1963052 1963999 R PFAM: integrase domain protein SAM domain protein; integrase; KEGG: tme:Tmel_0169 phage integrase; integrase domain-containing protein SAM domain-containing protein complement(1963052..1963999) Brachyspira murdochii DSM 12563 9142700 YP_003633989.1 CDS Bmur_1705 NC_014150.1 1964078 1964485 R KEGG: bhy:BHWA1_01032 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(1964078..1964485) Brachyspira murdochii DSM 12563 9142701 YP_003633990.1 CDS Bmur_1706 NC_014150.1 1964512 1965009 R KEGG: bpy:Bphyt_7293 hypothetical protein; hypothetical protein complement(1964512..1965009) Brachyspira murdochii DSM 12563 9142702 YP_003633991.1 CDS Bmur_1707 NC_014150.1 1965032 1965199 R hypothetical protein complement(1965032..1965199) Brachyspira murdochii DSM 12563 9142703 YP_003633992.1 CDS Bmur_1708 NC_014150.1 1965196 1965441 R KEGG: hypothetical protein; hypothetical protein complement(1965196..1965441) Brachyspira murdochii DSM 12563 9142704 YP_003633993.1 CDS Bmur_1709 NC_014150.1 1965438 1965674 R KEGG: hypothetical protein; hypothetical protein complement(1965438..1965674) Brachyspira murdochii DSM 12563 9142705 YP_003633994.1 CDS Bmur_1710 NC_014150.1 1965678 1965878 R KEGG: predicted protein; hypothetical protein complement(1965678..1965878) Brachyspira murdochii DSM 12563 9142706 YP_003633995.1 CDS Bmur_1711 NC_014150.1 1965882 1966076 R KEGG: hypothetical protein; hypothetical protein complement(1965882..1966076) Brachyspira murdochii DSM 12563 9142707 YP_003633996.1 CDS Bmur_1712 NC_014150.1 1966107 1966826 R KEGG: rme:Rmet_6243 hypothetical protein; hypothetical protein complement(1966107..1966826) Brachyspira murdochii DSM 12563 9142708 YP_003633997.1 CDS Bmur_1713 NC_014150.1 1966823 1967248 R KEGG: hypothetical protein; hypothetical protein complement(1966823..1967248) Brachyspira murdochii DSM 12563 9142709 YP_003633998.1 CDS Bmur_1714 NC_014150.1 1967202 1968056 R KEGG: hypothetical protein; hypothetical protein complement(1967202..1968056) Brachyspira murdochii DSM 12563 9142710 YP_003633999.1 CDS Bmur_1715 NC_014150.1 1968060 1968281 R KEGG: CG17514 gene product from transcript CG17514- RA; hypothetical protein complement(1968060..1968281) Brachyspira murdochii DSM 12563 9142711 YP_003634000.1 CDS Bmur_1716 NC_014150.1 1968294 1968563 R KEGG: cth:Cthe_1731 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(1968294..1968563) Brachyspira murdochii DSM 12563 9142712 YP_003634001.1 CDS Bmur_1717 NC_014150.1 1968626 1968916 R KEGG: cbi:CLJ_B2480 hypothetical protein; hypothetical protein complement(1968626..1968916) Brachyspira murdochii DSM 12563 9142713 YP_003634002.1 CDS Bmur_1718 NC_014150.1 1968988 1969263 R KEGG: bth:BT_2588 hypothetical protein; hypothetical protein complement(1968988..1969263) Brachyspira murdochii DSM 12563 9142714 YP_003634003.1 CDS Bmur_1719 NC_014150.1 1969275 1969535 R KEGG: cbi:CLJ_B1169 sensor histidine kinase; sensor histidine kinase complement(1969275..1969535) Brachyspira murdochii DSM 12563 9142715 YP_003634004.1 CDS Bmur_1720 NC_014150.1 1969607 1970053 R KEGG: gfo:GFO_3392 hypothetical protein; hypothetical protein complement(1969607..1970053) Brachyspira murdochii DSM 12563 9142716 YP_003634005.1 CDS Bmur_1721 NC_014150.1 1970071 1970907 R SMART: AAA ATPase; KEGG: ayw:AYWB_001 chromosomal replication initiation protein; hypothetical protein complement(1970071..1970907) Brachyspira murdochii DSM 12563 9142717 YP_003634006.1 CDS Bmur_1722 NC_014150.1 1970873 1971811 R KEGG: tpd:Teth39_0039 hypothetical protein; hypothetical protein complement(1970873..1971811) Brachyspira murdochii DSM 12563 9142718 YP_003634007.1 CDS Bmur_1723 NC_014150.1 1971801 1972169 R KEGG: cbk:CLL_A0880 calcium-transporting ATPase; hypothetical protein complement(1971801..1972169) Brachyspira murdochii DSM 12563 9142719 YP_003634008.1 CDS Bmur_1725 NC_014150.1 1973632 1974588 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bhy:BHWA1_02068 D-isomer specific 2- hydroxyacid dehydrogenase, catalytic domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(1973632..1974588) Brachyspira murdochii DSM 12563 9142721 YP_003634009.1 CDS Bmur_1726 NC_014150.1 1975033 1976394 D PFAM: Inner membrane CreD family protein; KEGG: bhy:BHWA1_01610 inner membrane protein; Inner membrane CreD family protein 1975033..1976394 Brachyspira murdochii DSM 12563 9142722 YP_003634010.1 CDS Bmur_1727 NC_014150.1 1976738 1977646 R KEGG: bhy:BHWA1_01612 hypothetical protein; hypothetical protein complement(1976738..1977646) Brachyspira murdochii DSM 12563 9142723 YP_003634011.1 CDS Bmur_1728 NC_014150.1 1977779 1978426 D TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; KEGG: bhy:BHWA1_01665 tRNA (guanine-N(7)-)- methyltransferase; PFAM: methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1977779..1978426 Brachyspira murdochii DSM 12563 9142724 YP_003634012.1 CDS Bmur_1729 NC_014150.1 1978446 1979432 D KEGG: bhy:BHWA1_01666 hypothetical protein; hypothetical protein 1978446..1979432 Brachyspira murdochii DSM 12563 9142725 YP_003634013.1 CDS Bmur_1730 NC_014150.1 1979644 1979838 D KEGG: bhy:BHWA1_01667 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 1979644..1979838 Brachyspira murdochii DSM 12563 9142726 YP_003634014.1 CDS Bmur_1731 NC_014150.1 1979867 1980886 D KEGG: bhy:BHWA1_01668 fatty acid/phospholipid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX 1979867..1980886 Brachyspira murdochii DSM 12563 9142727 YP_003634015.1 CDS Bmur_1732 NC_014150.1 1980929 1981783 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bhy:BHWA1_01669 3-oxoacyl-(acyl-carrier- protein) synthase III; 3-oxoacyl-ACP synthase 1980929..1981783 Brachyspira murdochii DSM 12563 9142728 YP_003634016.1 CDS Bmur_1733 NC_014150.1 1981846 1983153 D KEGG: bhy:BHWA1_01670 electron transport complex protein; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; RnfABCDGE type electron transport complex subunit C 1981846..1983153 Brachyspira murdochii DSM 12563 9142729 YP_003634017.1 CDS Bmur_1734 NC_014150.1 1983169 1984254 D KEGG: bhy:BHWA1_01671 electron transport complex; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; RnfABCDGE type electron transport complex subunit D 1983169..1984254 Brachyspira murdochii DSM 12563 9142730 YP_003634018.1 CDS Bmur_1735 NC_014150.1 1984254 1984826 D TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: bhy:BHWA1_01672 electron transport complex; SMART: FMN-binding domain protein; RnfABCDGE type electron transport complex subunit G 1984254..1984826 Brachyspira murdochii DSM 12563 9142731 YP_003634019.1 CDS Bmur_1736 NC_014150.1 1985030 1985881 R KEGG: bhy:BHWA1_00229 hypothetical protein; hypothetical protein complement(1985030..1985881) Brachyspira murdochii DSM 12563 9142732 YP_003634020.1 CDS Bmur_1737 NC_014150.1 1986172 1986552 R KEGG: bhy:BHWA1_01581 hypothetical protein; hypothetical protein complement(1986172..1986552) Brachyspira murdochii DSM 12563 9142733 YP_003634021.1 CDS Bmur_1738 NC_014150.1 1986946 1988160 D KEGG: bhy:BHWA1_01582 hypothetical protein; hypothetical protein 1986946..1988160 Brachyspira murdochii DSM 12563 9142734 YP_003634022.1 CDS Bmur_1739 NC_014150.1 1988202 1988618 D PFAM: protein of unknown function UPF0047; KEGG: bhy:BHWA1_02101 hypothetical protein; hypothetical protein 1988202..1988618 Brachyspira murdochii DSM 12563 9142735 YP_003634023.1 CDS Bmur_1740 NC_014150.1 1988844 1989257 R KEGG: bhy:BHWA1_02098 hypothetical protein; hypothetical protein complement(1988844..1989257) Brachyspira murdochii DSM 12563 9142736 YP_003634024.1 CDS Bmur_1741 NC_014150.1 1989309 1991603 R PFAM: metallophosphoesterase; tRNA ligase, adenylyltransferase, fungi; KEGG: bpu:BPUM_1677 phosphoprotein phosphatase; metallophosphoesterase complement(1989309..1991603) Brachyspira murdochii DSM 12563 9142737 YP_003634025.1 CDS Bmur_1742 NC_014150.1 1991639 1992139 R PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01604 NUDIX hydrolase; NUDIX hydrolase complement(1991639..1992139) Brachyspira murdochii DSM 12563 9142738 YP_003634026.1 CDS Bmur_1743 NC_014150.1 1992254 1993060 R PFAM: peptidase M55 D-aminopeptidase; KEGG: bhy:BHWA1_01605 D-aminopeptidase; peptidase M55 D-aminopeptidase complement(1992254..1993060) Brachyspira murdochii DSM 12563 9142739 YP_003634027.1 CDS Bmur_1744 NC_014150.1 1993195 1995924 D KEGG: syp:SYNPCC7002_A2132 DNA methyltransferase; DNA methyltransferase 1993195..1995924 Brachyspira murdochii DSM 12563 9142740 YP_003634028.1 CDS Bmur_1745 NC_014150.1 1996106 1997077 D KEGG: nmn:NMCC_0685 hypothetical protein; hypothetical protein 1996106..1997077 Brachyspira murdochii DSM 12563 9142741 YP_003634029.1 CDS Bmur_1746 NC_014150.1 1997161 1997637 R KEGG: cch:Cag_0310 hypothetical protein; PFAM: PilT protein domain protein; SMART: nucleotide binding protein PINc; twitching motility protein PilT complement(1997161..1997637) Brachyspira murdochii DSM 12563 9142742 YP_003634030.1 CDS Bmur_1747 NC_014150.1 1997638 1998783 R KEGG: cch:Cag_0309 hypothetical protein; PFAM: protein of unknown function DUF955; SMART: helix-turn-helix domain protein; hypothetical protein complement(1997638..1998783) Brachyspira murdochii DSM 12563 9142743 YP_003634031.1 CDS Bmur_1748 NC_014150.1 1998949 2000031 R SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: bhy:BHWA1_01648 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase complement(1998949..2000031) Brachyspira murdochii DSM 12563 9142744 YP_003634032.1 CDS Bmur_1749 NC_014150.1 2000555 2001127 D KEGG: bhy:BHWA1_01647 periplasmic protein; hypothetical protein 2000555..2001127 Brachyspira murdochii DSM 12563 9142745 YP_003634033.1 CDS Bmur_1750 NC_014150.1 2001177 2001428 D KEGG: bhy:BHWA1_01646 periplasmic protein; hypothetical protein 2001177..2001428 Brachyspira murdochii DSM 12563 9142746 YP_003634034.1 CDS Bmur_1751 NC_014150.1 2001740 2003080 R KEGG: bhy:BHWA1_02060 adenosylmethionine--8-amino-7- oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(2001740..2003080) Brachyspira murdochii DSM 12563 9142747 YP_003634035.1 CDS Bmur_1752 NC_014150.1 2003187 2003855 R KEGG: bhy:BHWA1_02061 dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase complement(2003187..2003855) Brachyspira murdochii DSM 12563 9142748 YP_003634036.1 CDS Bmur_1753 NC_014150.1 2003872 2004873 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: bhy:BHWA1_02062 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; biotin synthase complement(2003872..2004873) Brachyspira murdochii DSM 12563 9142749 YP_003634037.1 CDS Bmur_1754 NC_014150.1 2004890 2005873 R KEGG: bhy:BHWA1_02063 biotin--protein ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn- helix type 11 domain protein; biotin--acetyl-CoA-carboxylase ligase complement(2004890..2005873) Brachyspira murdochii DSM 12563 9142750 YP_003634038.1 CDS Bmur_1756 NC_014150.1 2007013 2008140 R TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; KEGG: bhy:BHWA1_02045 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl- CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta complement(2007013..2008140) Brachyspira murdochii DSM 12563 9142752 YP_003634039.1 CDS Bmur_1757 NC_014150.1 2008157 2008561 R PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bhy:BHWA1_02044 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; biotin/lipoyl attachment domain-containing protein complement(2008157..2008561) Brachyspira murdochii DSM 12563 9142753 YP_003634040.1 CDS Bmur_1758 NC_014150.1 2008657 2008974 R PFAM: sodium pump decarboxylase gamma subunit; KEGG: bhy:BHWA1_02043 sodium pump decarboxylase, gamma subunit; sodium pump decarboxylase gamma subunit complement(2008657..2008974) Brachyspira murdochii DSM 12563 9142754 YP_003634041.1 CDS Bmur_1759 NC_014150.1 2009007 2010551 R PFAM: carboxyl transferase; KEGG: bhy:BHWA1_02042 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); carboxyl transferase complement(2009007..2010551) Brachyspira murdochii DSM 12563 9142755 YP_003634042.1 CDS Bmur_1760 NC_014150.1 2010854 2011498 D KEGG: bhy:BHWA1_02041 hypothetical protein; hypothetical protein 2010854..2011498 Brachyspira murdochii DSM 12563 9142756 YP_003634043.1 CDS Bmur_1761 NC_014150.1 2011917 2013101 D TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_01389 metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2011917..2013101 Brachyspira murdochii DSM 12563 9142757 YP_003634044.1 CDS Bmur_1762 NC_014150.1 2013173 2014054 D KEGG: bhy:BHWA1_01388 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 2013173..2014054 Brachyspira murdochii DSM 12563 9142758 YP_003634045.1 CDS Bmur_1763 NC_014150.1 2014088 2014783 D TIGRFAM: dihydrodipicolinate reductase; KEGG: bhy:BHWA1_01387 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 2014088..2014783 Brachyspira murdochii DSM 12563 9142759 YP_003634046.1 CDS Bmur_1764 NC_014150.1 2014849 2015562 D KEGG: bhy:BHWA1_01386 tetrahydrodipicolinate succinylase; TIGRFAM:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase hexapeptide repeat containing protein; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2014849..2015562 Brachyspira murdochii DSM 12563 9142760 YP_003634047.1 CDS Bmur_1765 NC_014150.1 2015722 2016363 D KEGG: bhy:BHWA1_02058 hypothetical protein; hypothetical protein 2015722..2016363 Brachyspira murdochii DSM 12563 9142761 YP_003634048.1 CDS Bmur_1766 NC_014150.1 2016642 2017775 D PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_01385 aminotransferase A; class I and II aminotransferase 2016642..2017775 Brachyspira murdochii DSM 12563 9142762 YP_003634049.1 CDS Bmur_1768 NC_014150.1 2019029 2021293 R PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bhy:BHWA1_01938 pyruvate ferredoxin oxireductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(2019029..2021293) Brachyspira murdochii DSM 12563 9142764 YP_003634050.1 CDS Bmur_1769 NC_014150.1 2021308 2022342 R KEGG: bhy:BHWA1_01937 pyruvate oxireductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate/ketoisovalerate oxidoreductase; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; pyruvate/ketoisovalerate oxidoreductase subunit gamma complement(2021308..2022342) Brachyspira murdochii DSM 12563 9142765 YP_003634051.1 CDS Bmur_1770 NC_014150.1 2022639 2024483 D KEGG: bhy:BHWA1_01935 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2022639..2024483 Brachyspira murdochii DSM 12563 9142766 YP_003634052.1 CDS Bmur_1771 NC_014150.1 2024703 2025815 D KEGG: bhy:BHWA1_01934 hypothetical protein; hypothetical protein 2024703..2025815 Brachyspira murdochii DSM 12563 9142767 YP_003634053.1 CDS Bmur_1772 NC_014150.1 2025888 2026292 D KEGG: bhy:BHWA1_01933 hypothetical protein; hypothetical protein 2025888..2026292 Brachyspira murdochii DSM 12563 9142768 YP_003634054.1 CDS Bmur_1773 NC_014150.1 2026433 2026858 D KEGG: bhy:BHWA1_01607 hypothetical protein; hypothetical protein 2026433..2026858 Brachyspira murdochii DSM 12563 9142769 YP_003634055.1 CDS Bmur_1774 NC_014150.1 2026945 2027469 R KEGG: bhy:BHWA1_01608 hypothetical protein; hypothetical protein complement(2026945..2027469) Brachyspira murdochii DSM 12563 9142770 YP_003634056.1 CDS Bmur_1775 NC_014150.1 2027650 2028636 D PFAM: aldo/keto reductase; KEGG: bhy:BHWA1_01609 aldo/keto reductase; aldo/keto reductase 2027650..2028636 Brachyspira murdochii DSM 12563 9142771 YP_003634057.1 CDS Bmur_1776 NC_014150.1 2028886 2029812 D KEGG: bhy:BHWA1_01536 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 2028886..2029812 Brachyspira murdochii DSM 12563 9142772 YP_003634058.1 CDS Bmur_1777 NC_014150.1 2030008 2030709 D KEGG: bhy:BHWA1_01535 hypothetical protein; hypothetical protein 2030008..2030709 Brachyspira murdochii DSM 12563 9142773 YP_003634059.1 CDS Bmur_1778 NC_014150.1 2030795 2032153 R KEGG: bhy:BHWA1_01527 hypothetical protein; PFAM: hypothetical protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide repeat; hypothetical protein complement(2030795..2032153) Brachyspira murdochii DSM 12563 9142774 YP_003634060.1 CDS Bmur_1779 NC_014150.1 2032177 2032461 R KEGG: bhy:BHWA1_01528 hypothetical protein; hypothetical protein complement(2032177..2032461) Brachyspira murdochii DSM 12563 9142775 YP_003634061.1 CDS Bmur_1780 NC_014150.1 2032945 2033667 D KEGG: bhy:BHWA1_01515 hypothetical protein; hypothetical protein 2032945..2033667 Brachyspira murdochii DSM 12563 9142776 YP_003634062.1 CDS Bmur_1781 NC_014150.1 2033732 2034982 D KEGG: bhy:BHWA1_01460 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 2033732..2034982 Brachyspira murdochii DSM 12563 9142777 YP_003634063.1 CDS Bmur_1782 NC_014150.1 2035010 2035570 D KEGG: lba:Lebu_0364 hypothetical protein; hypothetical protein 2035010..2035570 Brachyspira murdochii DSM 12563 9142778 YP_003634064.1 CDS Bmur_1783 NC_014150.1 2035688 2036638 D KEGG: bhy:BHWA1_01514 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2035688..2036638 Brachyspira murdochii DSM 12563 9142779 YP_003634065.1 CDS Bmur_1784 NC_014150.1 2036694 2036873 R KEGG: hypothetical protein; hypothetical protein complement(2036694..2036873) Brachyspira murdochii DSM 12563 9142780 YP_003634066.1 CDS Bmur_1785 NC_014150.1 2037080 2038390 D PFAM: xanthine/uracil/vitamin C permease; KEGG: bhy:BHWA1_01649 integral membrane transport protein; xanthine/uracil/vitamin C permease 2037080..2038390 Brachyspira murdochii DSM 12563 9142781 YP_003634067.1 CDS Bmur_1786 NC_014150.1 2038807 2039259 R KEGG: hypothetical protein; hypothetical protein complement(2038807..2039259) Brachyspira murdochii DSM 12563 9142782 YP_003634068.1 CDS Bmur_1787 NC_014150.1 2039796 2040947 D TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide- transf erase; KEGG: bhy:BHWA1_01638 phospho-N-acetylmuramoyl- pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 2039796..2040947 Brachyspira murdochii DSM 12563 9142783 YP_003634069.1 CDS Bmur_1788 NC_014150.1 2041025 2041636 D TIGRFAM: thymidylate kinase; KEGG: bhy:BHWA1_01639 thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 2041025..2041636 Brachyspira murdochii DSM 12563 9142784 YP_003634070.1 CDS Bmur_1789 NC_014150.1 2041605 2042021 R KEGG: cts:Ctha_0653 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(2041605..2042021) Brachyspira murdochii DSM 12563 9142785 YP_003634071.1 CDS Bmur_1790 NC_014150.1 2042778 2043446 R PFAM: DNA alkylation repair enzyme; KEGG: bhy:BHWA1_01644 DNA alkylation repair enzyme; DNA alkylation repair protein complement(2042778..2043446) Brachyspira murdochii DSM 12563 9142786 YP_003634072.1 CDS Bmur_1791 NC_014150.1 2043461 2044465 R PFAM: Malate/L-lactate dehydrogenase; KEGG: bhy:BHWA1_01645 malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase complement(2043461..2044465) Brachyspira murdochii DSM 12563 9142787 YP_003634073.1 CDS Bmur_1792 NC_014150.1 2045342 2046199 D PFAM: flagellin domain protein; KEGG: bhy:BHWA1_01501 flagellar filament core protein flaB2; flagellin domain-containing protein 2045342..2046199 Brachyspira murdochii DSM 12563 9142788 YP_003634074.1 CDS Bmur_1793 NC_014150.1 2046680 2047312 D PFAM: protein of unknown function DUF1121; KEGG: bhy:BHWA1_01500 hypothetical protein; hypothetical protein 2046680..2047312 Brachyspira murdochii DSM 12563 9142789 YP_003634075.1 CDS Bmur_1794 NC_014150.1 2047394 2051131 R KEGG: bhy:BHWA1_01509 hypothetical protein; hypothetical protein complement(2047394..2051131) Brachyspira murdochii DSM 12563 9142790 YP_003634076.1 CDS Bmur_1795 NC_014150.1 2051446 2051925 D KEGG: bhy:BHWA1_01508 hypothetical protein; hypothetical protein 2051446..2051925 Brachyspira murdochii DSM 12563 9142791 YP_003634077.1 CDS Bmur_1796 NC_014150.1 2052381 2053610 D PFAM: Colicin lysis protein; KEGG: hypothetical protein; Colicin lysis protein 2052381..2053610 Brachyspira murdochii DSM 12563 9142792 YP_003634078.1 CDS Bmur_1797 NC_014150.1 2053622 2054473 D KEGG: bhy:BHWA1_01349 hypothetical protein; hypothetical protein 2053622..2054473 Brachyspira murdochii DSM 12563 9142793 YP_003634079.1 CDS Bmur_1798 NC_014150.1 2054777 2055412 R KEGG: bhy:BHWA1_01643 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(2054777..2055412) Brachyspira murdochii DSM 12563 9142794 YP_003634080.1 CDS Bmur_1799 NC_014150.1 2055907 2056479 D KEGG: bhy:BHWA1_01507 hypothetical protein; hypothetical protein 2055907..2056479 Brachyspira murdochii DSM 12563 9142795 YP_003634081.1 CDS Bmur_1800 NC_014150.1 2056539 2057165 R KEGG: bhy:BHWA1_01506 hypothetical protein; hypothetical protein complement(2056539..2057165) Brachyspira murdochii DSM 12563 9142796 YP_003634082.1 CDS Bmur_1801 NC_014150.1 2057187 2057738 R KEGG: hypothetical protein; hypothetical protein complement(2057187..2057738) Brachyspira murdochii DSM 12563 9142797 YP_003634083.1 CDS Bmur_1802 NC_014150.1 2058030 2058590 R KEGG: bhy:BHWA1_01505 hypothetical protein; hypothetical protein complement(2058030..2058590) Brachyspira murdochii DSM 12563 9142798 YP_003634084.1 CDS Bmur_1803 NC_014150.1 2059097 2060710 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01426 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein complement(2059097..2060710) Brachyspira murdochii DSM 12563 9142799 YP_003634085.1 CDS Bmur_1804 NC_014150.1 2060860 2061549 D SMART: ankyrin; KEGG: bhy:BHWA1_01425 ankyrin repeat-containing protein; ankyrin 2060860..2061549 Brachyspira murdochii DSM 12563 9142800 YP_003634086.1 CDS Bmur_1805 NC_014150.1 2061649 2063616 R KEGG: bhy:BHWA1_01375 methyl-accepting chemotaxis protein C; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(2061649..2063616) Brachyspira murdochii DSM 12563 9142801 YP_003634087.1 CDS Bmur_1806 NC_014150.1 2063753 2064793 R KEGG: bhy:BHWA1_01374 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase complement(2063753..2064793) Brachyspira murdochii DSM 12563 9142802 YP_003634088.1 CDS Bmur_1807 NC_014150.1 2064881 2065309 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: bhy:BHWA1_01373 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(2064881..2065309) Brachyspira murdochii DSM 12563 9142803 YP_003634089.1 CDS Bmur_1808 NC_014150.1 2065364 2067970 R KEGG: bhy:BHWA1_01372 outer membrane protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; outer membrane protein assembly complex, YaeT protein complement(2065364..2067970) Brachyspira murdochii DSM 12563 9142804 YP_003634090.1 CDS Bmur_1809 NC_014150.1 2067970 2072418 R PFAM: protein of unknown function DUF490; KEGG: bhy:BHWA1_01371 hypothetical protein; hypothetical protein complement(2067970..2072418) Brachyspira murdochii DSM 12563 9142805 YP_003634091.1 CDS Bmur_1810 NC_014150.1 2072658 2073092 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_01370 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 2072658..2073092 Brachyspira murdochii DSM 12563 9142806 YP_003634092.1 CDS Bmur_1811 NC_014150.1 2073346 2074380 D KEGG: bhy:BHWA1_01367 hypothetical protein; hypothetical protein 2073346..2074380 Brachyspira murdochii DSM 12563 9142807 YP_003634093.1 CDS Bmur_1812 NC_014150.1 2074377 2075114 R PFAM: phosphoribosyltransferase; KEGG: bhy:BHWA1_01366 phosphoribosyltransferace; phosphoribosyltransferase complement(2074377..2075114) Brachyspira murdochii DSM 12563 9142808 YP_003634094.1 CDS Bmur_1813 NC_014150.1 2075114 2075905 R KEGG: bhy:BHWA1_01365 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein complement(2075114..2075905) Brachyspira murdochii DSM 12563 9142809 YP_003634095.1 CDS Bmur_1814 NC_014150.1 2076588 2077520 D KEGG: bhy:BHWA1_01364 lysophospholipase; lysophospholipase 2076588..2077520 Brachyspira murdochii DSM 12563 9142810 YP_003634096.1 CDS Bmur_1815 NC_014150.1 2077601 2078953 R KEGG: bhy:BHWA1_01362 cell cycle protein MesJ; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase complement(2077601..2078953) Brachyspira murdochii DSM 12563 9142811 YP_003634097.1 CDS Bmur_1816 NC_014150.1 2078971 2079864 R PFAM: Domain of unknown function DUF1848; KEGG: bhy:BHWA1_01361 hypothetical protein; hypothetical protein complement(2078971..2079864) Brachyspira murdochii DSM 12563 9142812 YP_003634098.1 CDS Bmur_1817 NC_014150.1 2079877 2080503 R SMART: beta-lactamase domain protein; KEGG: bhy:BHWA1_01360 beta-lactamase domain protein; beta-lactamase complement(2079877..2080503) Brachyspira murdochii DSM 12563 9142813 YP_003634099.1 CDS Bmur_1818 NC_014150.1 2080516 2081322 R KEGG: bhy:BHWA1_01359 hypothetical protein; hypothetical protein complement(2080516..2081322) Brachyspira murdochii DSM 12563 9142814 YP_003634100.1 CDS Bmur_1819 NC_014150.1 2081370 2081747 R KEGG: bhy:BHWA1_01358 hypothetical protein; hypothetical protein complement(2081370..2081747) Brachyspira murdochii DSM 12563 9142815 YP_003634101.1 CDS Bmur_1820 NC_014150.1 2081765 2081908 R KEGG: bhy:BHWA1_01357 hypothetical protein; hypothetical protein complement(2081765..2081908) Brachyspira murdochii DSM 12563 9142816 YP_003634102.1 CDS Bmur_1821 NC_014150.1 2082015 2082464 R KEGG: bhy:BHWA1_01356 hypothetical protein; hypothetical protein complement(2082015..2082464) Brachyspira murdochii DSM 12563 9142817 YP_003634103.1 CDS Bmur_1822 NC_014150.1 2082636 2083979 D PFAM: multi antimicrobial extrusion protein MatE; KEGG: bhy:BHWA1_01355 MATE efflux family protein; multi antimicrobial extrusion protein MatE 2082636..2083979 Brachyspira murdochii DSM 12563 9142818 YP_003634104.1 CDS Bmur_1823 NC_014150.1 2084060 2085037 R PFAM: cobalamin biosynthesis protein CbiB; KEGG: bhy:BHWA1_01354 cobalamin biosynthesis protein B; cobalamin biosynthesis protein CbiB complement(2084060..2085037) Brachyspira murdochii DSM 12563 9142819 YP_003634105.1 CDS Bmur_1824 NC_014150.1 2085085 2085669 R KEGG: bhy:BHWA1_01353 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase; SMART: phosphoglycerate mutase; phosphoglycerate mutase complement(2085085..2085669) Brachyspira murdochii DSM 12563 9142820 YP_003634106.1 CDS Bmur_1825 NC_014150.1 2086152 2087660 D PFAM: arylsulfotransferase; KEGG: bhy:BHWA1_01792 arylsulfate sulfotransferase; arylsulfotransferase 2086152..2087660 Brachyspira murdochii DSM 12563 9142821 YP_003634107.1 CDS Bmur_1826 NC_014150.1 2088012 2090408 D TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: bhy:BHWA1_01352 membrane-bound proton- translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; V-type H(+)-translocating pyrophosphatase 2088012..2090408 Brachyspira murdochii DSM 12563 9142822 YP_003634108.1 CDS Bmur_1827 NC_014150.1 2090553 2091308 D KEGG: bhy:BHWA1_01349 hypothetical protein; hypothetical protein 2090553..2091308 Brachyspira murdochii DSM 12563 9142823 YP_003634109.1 CDS Bmur_1828 NC_014150.1 2091549 2093381 D KEGG: bhy:BHWA1_01350 methyl-accepting chemotaxis protein A; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2091549..2093381 Brachyspira murdochii DSM 12563 9142824 YP_003634110.1 CDS Bmur_1829 NC_014150.1 2093546 2094676 R KEGG: bhy:BHWA1_00870 ABC transporter BitD; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2093546..2094676) Brachyspira murdochii DSM 12563 9142825 YP_003634111.1 CDS Bmur_1830 NC_014150.1 2094836 2095498 R KEGG: bhy:BHWA1_02118 bifunctional phosphoribosyl- AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP diphosphatase complement(2094836..2095498) Brachyspira murdochii DSM 12563 9142826 YP_003634112.1 CDS Bmur_1831 NC_014150.1 2095903 2096277 D KEGG: bhy:BHWA1_02119 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 2095903..2096277 Brachyspira murdochii DSM 12563 9142827 YP_003634113.1 CDS Bmur_1832 NC_014150.1 2096292 2096762 D KEGG: bhy:BHWA1_02120 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 2096292..2096762 Brachyspira murdochii DSM 12563 9142828 YP_003634114.1 CDS Bmur_1833 NC_014150.1 2096783 2098864 D KEGG: bhy:BHWA1_02121 elongation factor G; TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; translation elongation factor G 2096783..2098864 Brachyspira murdochii DSM 12563 9142829 YP_003634115.1 CDS Bmur_1834 NC_014150.1 2098935 2100161 D KEGG: bhy:BHWA1_02122 elongation factor Tu; TIGRFAM: translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; translation elongation factor Tu 2098935..2100161 Brachyspira murdochii DSM 12563 9142830 YP_003634116.1 CDS Bmur_1835 NC_014150.1 2100246 2100551 D KEGG: bhy:BHWA1_02123 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 2100246..2100551 Brachyspira murdochii DSM 12563 9142831 YP_003634117.1 CDS Bmur_1836 NC_014150.1 2100656 2101309 D KEGG: bhy:BHWA1_02124 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 2100656..2101309 Brachyspira murdochii DSM 12563 9142832 YP_003634118.1 CDS Bmur_1837 NC_014150.1 2101335 2101982 D PFAM: ribosomal protein L4/L1e; KEGG: bhy:BHWA1_02125 50S ribosomal protein L4; 50S ribosomal protein L4 2101335..2101982 Brachyspira murdochii DSM 12563 9142833 YP_003634119.1 CDS Bmur_1838 NC_014150.1 2101988 2102287 D PFAM: ribosomal protein L25/L23; KEGG: bhy:BHWA1_02126 50S ribosomal protein L23; ribosomal protein L25/L23 2101988..2102287 Brachyspira murdochii DSM 12563 9142834 YP_003634120.1 CDS Bmur_1839 NC_014150.1 2102300 2103136 D KEGG: bhy:BHWA1_02127 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 2102300..2103136 Brachyspira murdochii DSM 12563 9142835 YP_003634121.1 CDS Bmur_1840 NC_014150.1 2103136 2103405 D KEGG: bhy:BHWA1_02128 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 2103136..2103405 Brachyspira murdochii DSM 12563 9142836 YP_003634122.1 CDS Bmur_1841 NC_014150.1 2103417 2103824 D KEGG: bhy:BHWA1_02129 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 2103417..2103824 Brachyspira murdochii DSM 12563 9142837 YP_003634123.1 CDS Bmur_1842 NC_014150.1 2103828 2104565 D TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; ribosomal protein S3 domain; KH type 2 domain protein; KEGG: bhy:BHWA1_02130 30S ribosomal protein S3; SMART: KH domain protein; 30S ribosomal protein S3 2103828..2104565 Brachyspira murdochii DSM 12563 9142838 YP_003634124.1 CDS Bmur_1843 NC_014150.1 2104565 2104978 D KEGG: bhy:BHWA1_02131 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L10e/L16; 50S ribosomal protein L16 2104565..2104978 Brachyspira murdochii DSM 12563 9142839 YP_003634125.1 CDS Bmur_1844 NC_014150.1 2104978 2105184 D KEGG: bhy:BHWA1_02132 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 2104978..2105184 Brachyspira murdochii DSM 12563 9142840 YP_003634126.1 CDS Bmur_1845 NC_014150.1 2105197 2105559 D KEGG: bhy:BHWA1_02133 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 2105197..2105559 Brachyspira murdochii DSM 12563 9142841 YP_003634127.1 CDS Bmur_1846 NC_014150.1 2105565 2105933 D KEGG: bhy:BHWA1_02134 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 2105565..2105933 Brachyspira murdochii DSM 12563 9142842 YP_003634128.1 CDS Bmur_1847 NC_014150.1 2105935 2106276 D TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: bhy:BHWA1_02135 50S ribosomal protein L24; SMART: KOW domain protein; 50S ribosomal protein L24 2105935..2106276 Brachyspira murdochii DSM 12563 9142843 YP_003634129.1 CDS Bmur_1848 NC_014150.1 2106292 2106855 D PFAM: ribosomal protein L5; KEGG: bhy:BHWA1_02136 50S ribosomal protein L5; 50S ribosomal protein L5 2106292..2106855 Brachyspira murdochii DSM 12563 9142844 YP_003634130.1 CDS Bmur_1849 NC_014150.1 2106855 2107040 D PFAM: ribosomal protein S14; KEGG: ribosomal protein S14; 30S ribosomal protein S14 2106855..2107040 Brachyspira murdochii DSM 12563 9142845 YP_003634131.1 CDS Bmur_1850 NC_014150.1 2107058 2107459 D PFAM: ribosomal protein S8; KEGG: bhy:BHWA1_02137 30S ribosomal protein S8; 30S ribosomal protein S8 2107058..2107459 Brachyspira murdochii DSM 12563 9142846 YP_003634132.1 CDS Bmur_1851 NC_014150.1 2107481 2108053 D KEGG: bhy:BHWA1_02138 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 2107481..2108053 Brachyspira murdochii DSM 12563 9142847 YP_003634133.1 CDS Bmur_1852 NC_014150.1 2108064 2108420 D KEGG: bhy:BHWA1_02139 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 2108064..2108420 Brachyspira murdochii DSM 12563 9142848 YP_003634134.1 CDS Bmur_1853 NC_014150.1 2108432 2108950 D KEGG: bhy:BHWA1_02140 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein; 30S ribosomal protein S5 2108432..2108950 Brachyspira murdochii DSM 12563 9142849 YP_003634135.1 CDS Bmur_1854 NC_014150.1 2108950 2109129 D KEGG: bhy:BHWA1_02141 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 2108950..2109129 Brachyspira murdochii DSM 12563 9142850 YP_003634136.1 CDS Bmur_1855 NC_014150.1 2109141 2109629 D KEGG: bhy:BHWA1_02142 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; 50S ribosomal protein L15 2109141..2109629 Brachyspira murdochii DSM 12563 9142851 YP_003634137.1 CDS Bmur_1856 NC_014150.1 2109641 2110981 D KEGG: bhy:BHWA1_02143 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 2109641..2110981 Brachyspira murdochii DSM 12563 9142852 YP_003634138.1 CDS Bmur_1857 NC_014150.1 2110986 2111204 D KEGG: bhy:BHWA1_02144 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 2110986..2111204 Brachyspira murdochii DSM 12563 9142853 YP_003634139.1 CDS Bmur_1858 NC_014150.1 2111229 2111345 D KEGG: fsu:Fisuc_1400 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 2111229..2111345 Brachyspira murdochii DSM 12563 9142854 YP_003634140.1 CDS Bmur_1859 NC_014150.1 2111368 2111757 D KEGG: bhy:BHWA1_02145 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 2111368..2111757 Brachyspira murdochii DSM 12563 9142855 YP_003634141.1 CDS Bmur_1860 NC_014150.1 2111774 2112184 D KEGG: bhy:BHWA1_02146 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 2111774..2112184 Brachyspira murdochii DSM 12563 9142856 YP_003634142.1 CDS Bmur_1861 NC_014150.1 2112223 2112849 D TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: bhy:BHWA1_02147 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 2112223..2112849 Brachyspira murdochii DSM 12563 9142857 YP_003634143.1 CDS Bmur_1862 NC_014150.1 2112880 2113854 D TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; KEGG: bhy:BHWA1_02148 DNA-directed RNA polymerase alpha subunit; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 2112880..2113854 Brachyspira murdochii DSM 12563 9142858 YP_003634144.1 CDS Bmur_1863 NC_014150.1 2113888 2114274 D KEGG: bhy:BHWA1_02149 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 2113888..2114274 Brachyspira murdochii DSM 12563 9142859 YP_003634145.1 CDS Bmur_1864 NC_014150.1 2114407 2115897 D TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA- binding; KEGG: bhy:BHWA1_02150 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho 2114407..2115897 Brachyspira murdochii DSM 12563 9142860 YP_003634146.1 CDS Bmur_1865 NC_014150.1 2115923 2116519 D KEGG: bhy:BHWA1_02151 Smr domain protein; small MutS related protein; C-terminal region of the MutS2 protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 2115923..2116519 Brachyspira murdochii DSM 12563 9142861 YP_003634147.1 CDS Bmur_1866 NC_014150.1 2116649 2117377 R KEGG: bhy:BHWA1_01565 amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2116649..2117377) Brachyspira murdochii DSM 12563 9142862 YP_003634148.1 CDS Bmur_1867 NC_014150.1 2117370 2118083 R KEGG: bhy:BHWA1_01566 amino acid transport system permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(2117370..2118083) Brachyspira murdochii DSM 12563 9142863 YP_003634149.1 CDS Bmur_1868 NC_014150.1 2118202 2118945 R KEGG: bhy:BHWA1_01567 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein complement(2118202..2118945) Brachyspira murdochii DSM 12563 9142864 YP_003634150.1 CDS Bmur_1869 NC_014150.1 2119187 2119795 D KEGG: bhy:BHWA1_01568 LemA family protein; LemA family protein 2119187..2119795 Brachyspira murdochii DSM 12563 9142865 YP_003634151.1 CDS Bmur_1870 NC_014150.1 2119914 2120948 D KEGG: bhy:BHWA1_01569 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: regulatory protein LacI; LacI family transcriptional regulator 2119914..2120948 Brachyspira murdochii DSM 12563 9142866 YP_003634152.1 CDS Bmur_1871 NC_014150.1 2121133 2121564 D KEGG: bhy:BHWA1_01570 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 2121133..2121564 Brachyspira murdochii DSM 12563 9142867 YP_003634153.1 CDS Bmur_1872 NC_014150.1 2121602 2122429 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: bhy:BHWA1_01571 ferredoxin--DP(+) reductase subunit alpha ue; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2121602..2122429 Brachyspira murdochii DSM 12563 9142868 YP_003634154.1 CDS Bmur_1873 NC_014150.1 2122658 2123551 D PFAM: restriction endonuclease; KEGG: bhy:BHWA1_02110 restriction system protein Mrr; restriction endonuclease 2122658..2123551 Brachyspira murdochii DSM 12563 9142869 YP_003634155.1 CDS Bmur_1874 NC_014150.1 2123608 2124570 D TIGRFAM: thiamine-monophosphate kinase; KEGG: bhy:BHWA1_01673 thiamine monophosphate kinase; PFAM: AIR synthase related protein; thiamine-monophosphate kinase 2123608..2124570 Brachyspira murdochii DSM 12563 9142870 YP_003634156.1 CDS Bmur_1875 NC_014150.1 2124675 2125850 D KEGG: bhy:BHWA1_01674 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 2124675..2125850 Brachyspira murdochii DSM 12563 9142871 YP_003634157.1 CDS Bmur_1876 NC_014150.1 2126313 2127482 D TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_00811 AbgB, metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2126313..2127482 Brachyspira murdochii DSM 12563 9142872 YP_003634158.1 CDS Bmur_1877 NC_014150.1 2127556 2127819 D KEGG: bhy:BHWA1_01557 hypothetical protein; hypothetical protein 2127556..2127819 Brachyspira murdochii DSM 12563 9142873 YP_003634159.1 CDS Bmur_1878 NC_014150.1 2127923 2129716 R PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_01558 glycosyltransferase; glycosyl transferase complement(2127923..2129716) Brachyspira murdochii DSM 12563 9142874 YP_003634160.1 CDS Bmur_1879 NC_014150.1 2129802 2130377 R PFAM: Radical SAM domain protein; KEGG: pna:Pnap_4602 radical SAM domain-containing protein; radical SAM protein complement(2129802..2130377) Brachyspira murdochii DSM 12563 9142875 YP_003634161.1 CDS Bmur_1881 NC_014150.1 2132234 2133373 R KEGG: pna:Pnap_4604 hypothetical protein; hypothetical protein complement(2132234..2133373) Brachyspira murdochii DSM 12563 9142877 YP_003634162.1 CDS Bmur_1882 NC_014150.1 2133388 2135835 R SMART: nucleotide binding protein PINc; KEGG: bhy:BHWA1_01907 predicted nucleotide-binding domain PINc family; nucleotide binding protein PINc complement(2133388..2135835) Brachyspira murdochii DSM 12563 9142878 YP_003634163.1 CDS Bmur_1883 NC_014150.1 2135871 2139725 R SMART: AAA ATPase; KEGG: pna:Pnap_4606 superfamily I DNA/RNA helicase; ATPase AAA complement(2135871..2139725) Brachyspira murdochii DSM 12563 9142879 YP_003634164.1 CDS Bmur_1884 NC_014150.1 2139933 2140445 R KEGG: bhy:BHWA1_01559 thioesterase; thioesterase complement(2139933..2140445) Brachyspira murdochii DSM 12563 9142880 YP_003634165.1 CDS Bmur_1885 NC_014150.1 2140891 2141154 D KEGG: bhy:BHWA1_01560 hypothetical protein; hypothetical protein 2140891..2141154 Brachyspira murdochii DSM 12563 9142881 YP_003634166.1 CDS Bmur_1886 NC_014150.1 2141164 2141559 D KEGG: bhy:BHWA1_01561 hypothetical protein; hypothetical protein 2141164..2141559 Brachyspira murdochii DSM 12563 9142882 YP_003634167.1 CDS Bmur_1887 NC_014150.1 2141581 2142657 D KEGG: bhy:BHWA1_01562 hypothetical protein; hypothetical protein 2141581..2142657 Brachyspira murdochii DSM 12563 9142883 YP_003634168.1 CDS Bmur_1888 NC_014150.1 2142674 2143579 D KEGG: bhy:BHWA1_01563 hypothetical protein; hypothetical protein 2142674..2143579 Brachyspira murdochii DSM 12563 9142884 YP_003634169.1 CDS Bmur_1889 NC_014150.1 2144034 2146805 D KEGG: bhy:BHWA1_01321 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 2144034..2146805 Brachyspira murdochii DSM 12563 9142885 YP_003634170.1 CDS Bmur_1890 NC_014150.1 2146887 2148509 R KEGG: aae:aq_793 ATP-dependent DNA helicase REP; superfamily I DNA and RNA helicase-like protein complement(2146887..2148509) Brachyspira murdochii DSM 12563 9142886 YP_003634171.1 CDS Bmur_1891 NC_014150.1 2148499 2150385 R PFAM: SMC domain protein; KEGG: lsl:LSL_1565 hypothetical protein; SMC domain-containing protein complement(2148499..2150385) Brachyspira murdochii DSM 12563 9142887 YP_003634172.1 CDS Bmur_1892 NC_014150.1 2150714 2153890 D PFAM: protein of unknown function DUF450; N-6 DNA methylase; Eco57I restriction endonuclease; KEGG: bhy:BHWA1_01318 restriction enzyme methylase subunit; hypothetical protein 2150714..2153890 Brachyspira murdochii DSM 12563 9142888 YP_003634173.1 CDS Bmur_1893 NC_014150.1 2153891 2155045 D KEGG: conserved hypothetical protein; hypothetical protein 2153891..2155045 Brachyspira murdochii DSM 12563 9142889 YP_003634174.1 CDS Bmur_1895 NC_014150.1 2156475 2157281 D PFAM: RES domain protein; KEGG: bpu:BPUM_2269 hypothetical protein; RES domain-containing protein 2156475..2157281 Brachyspira murdochii DSM 12563 9142891 YP_003634175.1 CDS Bmur_1896 NC_014150.1 2157282 2158235 D KEGG: bth:BT_4741 hypothetical protein; hypothetical protein 2157282..2158235 Brachyspira murdochii DSM 12563 9142892 YP_003634176.1 CDS Bmur_1897 NC_014150.1 2158447 2159679 D KEGG: bhy:BHWA1_01313 hypothetical protein; hypothetical protein 2158447..2159679 Brachyspira murdochii DSM 12563 9142893 YP_003634177.1 CDS Bmur_1898 NC_014150.1 2160174 2162009 D KEGG: hypothetical protein; hypothetical protein 2160174..2162009 Brachyspira murdochii DSM 12563 9142894 YP_003634178.1 CDS Bmur_1900 NC_014150.1 2164099 2164413 D KEGG: pth:PTH_2162 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 2164099..2164413 Brachyspira murdochii DSM 12563 9142896 YP_003634179.1 CDS Bmur_1901 NC_014150.1 2164410 2165321 D KEGG: csc:Csac_2641 hypothetical protein; hypothetical protein 2164410..2165321 Brachyspira murdochii DSM 12563 9142897 YP_003634180.1 CDS Bmur_1902 NC_014150.1 2165490 2166704 D KEGG: bhy:BHWA1_01313 hypothetical protein; hypothetical protein 2165490..2166704 Brachyspira murdochii DSM 12563 9142898 YP_003634181.1 CDS Bmur_1903 NC_014150.1 2166776 2167051 D KEGG: bth:BT_0938 hypothetical protein; hypothetical protein 2166776..2167051 Brachyspira murdochii DSM 12563 9142899 YP_003634182.1 CDS Bmur_1904 NC_014150.1 2167169 2169487 D KEGG: ter:Tery_1465 signal transduction protein; hypothetical protein 2167169..2169487 Brachyspira murdochii DSM 12563 9142900 YP_003634183.1 CDS Bmur_1905 NC_014150.1 2169658 2170275 R KEGG: bhy:BHWA1_01307 phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(2169658..2170275) Brachyspira murdochii DSM 12563 9142901 YP_003634184.1 CDS Bmur_1906 NC_014150.1 2170376 2170630 D KEGG: bhy:BHWA1_01306 hypothetical protein; hypothetical protein 2170376..2170630 Brachyspira murdochii DSM 12563 9142902 YP_003634185.1 CDS Bmur_1907 NC_014150.1 2170965 2174081 D PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_01305 AcrB, cation/multidrug efflux pump; acriflavin resistance protein 2170965..2174081 Brachyspira murdochii DSM 12563 9142903 YP_003634186.1 CDS Bmur_1908 NC_014150.1 2174396 2175115 R KEGG: bhy:BHWA1_00027 hypothetical protein; hypothetical protein complement(2174396..2175115) Brachyspira murdochii DSM 12563 9142904 YP_003634187.1 CDS Bmur_1909 NC_014150.1 2175695 2177077 D KEGG: bhy:BHWA1_01301 hypothetical protein; hypothetical protein 2175695..2177077 Brachyspira murdochii DSM 12563 9142905 YP_003634188.1 CDS Bmur_1910 NC_014150.1 2177255 2177458 D KEGG: bhy:BHWA1_01303 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 2177255..2177458 Brachyspira murdochii DSM 12563 9142906 YP_003634189.1 CDS Bmur_1911 NC_014150.1 2177462 2178430 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bhy:BHWA1_02580 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 2177462..2178430 Brachyspira murdochii DSM 12563 9142907 YP_003634190.1 CDS Bmur_1912 NC_014150.1 2178476 2179177 D KEGG: bhy:BHWA1_01304 hypothetical protein; PFAM: B3/4 domain protein; SMART: B3/4 domain protein; B3/4 domain-containing protein 2178476..2179177 Brachyspira murdochii DSM 12563 9142908 YP_003634191.1 CDS Bmur_1913 NC_014150.1 2179399 2180652 R TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: bhy:BHWA1_01297 phosphoribosylamine-glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP- grasp (A) domain; phosphoribosylglycinamide synthetase, N- domain; phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine/glycine ligase complement(2179399..2180652) Brachyspira murdochii DSM 12563 9142909 YP_003634192.1 CDS Bmur_1914 NC_014150.1 2181304 2182722 D PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: art:Arth_0543 exo-alpha-sialidase; glycosyl hydrolase family protein 2181304..2182722 Brachyspira murdochii DSM 12563 9142910 YP_003634193.1 CDS Bmur_1915 NC_014150.1 2182741 2183961 D PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_02382 variable surface protein VspH; serpulina hyodysenteriae variable surface protein 2182741..2183961 Brachyspira murdochii DSM 12563 9142911 YP_003634194.1 CDS Bmur_1916 NC_014150.1 2184107 2184991 D PFAM: polyprenyl synthetase; KEGG: bhy:BHWA1_01299 geranylgeranyl pyrophosphate synthase; polyprenyl synthetase 2184107..2184991 Brachyspira murdochii DSM 12563 9142912 YP_003634195.1 CDS Bmur_1917 NC_014150.1 2185089 2186939 D PFAM: protein of unknown function DUF115; KEGG: bhy:BHWA1_01300 hypothetical protein; hypothetical protein 2185089..2186939 Brachyspira murdochii DSM 12563 9142913 YP_003634196.1 CDS Bmur_1918 NC_014150.1 2187421 2188008 D KEGG: abu:Abu_1515 hypothetical protein; hypothetical protein 2187421..2188008 Brachyspira murdochii DSM 12563 9142914 YP_003634197.1 CDS Bmur_1919 NC_014150.1 2188051 2188680 D KEGG: abu:Abu_1516 hypothetical protein; hypothetical protein 2188051..2188680 Brachyspira murdochii DSM 12563 9142915 YP_003634198.1 CDS Bmur_1920 NC_014150.1 2188717 2189064 D KEGG: hypothetical protein; hypothetical protein 2188717..2189064 Brachyspira murdochii DSM 12563 9142916 YP_003634199.1 CDS Bmur_1921 NC_014150.1 2189102 2189374 D KEGG: abu:Abu_1517 hypothetical protein; hypothetical protein 2189102..2189374 Brachyspira murdochii DSM 12563 9142917 YP_003634200.1 CDS Bmur_1922 NC_014150.1 2189388 2190182 R TIGRFAM: methionine aminopeptidase, type I; KEGG: bhy:BHWA1_01409 methionine aminopeptidase; PFAM: peptidase M24; methionine aminopeptidase complement(2189388..2190182) Brachyspira murdochii DSM 12563 9142918 YP_003634201.1 CDS Bmur_1923 NC_014150.1 2190200 2190463 R KEGG: bhy:BHWA1_01408 membrane protein; hypothetical protein complement(2190200..2190463) Brachyspira murdochii DSM 12563 9142919 YP_003634202.1 CDS Bmur_1924 NC_014150.1 2190494 2194504 R KEGG: bhy:BHWA1_01407 hypothetical protein; ATPase AAA complement(2190494..2194504) Brachyspira murdochii DSM 12563 9142920 YP_003634203.1 CDS Bmur_1925 NC_014150.1 2194538 2196607 R KEGG: bhy:BHWA1_01406 hypothetical protein; hypothetical protein complement(2194538..2196607) Brachyspira murdochii DSM 12563 9142921 YP_003634204.1 CDS Bmur_1926 NC_014150.1 2197084 2197689 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: bhy:BHWA1_01405 HAD superfamily hydrolase; HAD-superfamily hydrolase 2197084..2197689 Brachyspira murdochii DSM 12563 9142923 YP_003634205.1 CDS Bmur_1927 NC_014150.1 2197719 2199509 D KEGG: bhy:BHWA1_01404 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 2197719..2199509 Brachyspira murdochii DSM 12563 9142924 YP_003634206.1 CDS Bmur_1928 NC_014150.1 2199514 2199870 R KEGG: bhy:BHWA1_01403 response regulator; response regulator complement(2199514..2199870) Brachyspira murdochii DSM 12563 9142925 YP_003634207.1 CDS Bmur_1929 NC_014150.1 2200144 2201148 D KEGG: bhy:BHWA1_01400 hypothetical protein; hypothetical protein 2200144..2201148 Brachyspira murdochii DSM 12563 9142927 YP_003634208.1 CDS Bmur_1930 NC_014150.1 2201251 2202390 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bhy:BHWA1_01399 metal dependant phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 2201251..2202390 Brachyspira murdochii DSM 12563 9142928 YP_003634209.1 CDS Bmur_1931 NC_014150.1 2202400 2202732 R KEGG: bhy:BHWA1_01398 hypothetical protein; hypothetical protein complement(2202400..2202732) Brachyspira murdochii DSM 12563 9142929 YP_003634210.1 CDS Bmur_1932 NC_014150.1 2202735 2203208 R PFAM: CheC domain protein; KEGG: bhy:BHWA1_01397 chemotaxis protein CheC; chemotaxis protein CheC complement(2202735..2203208) Brachyspira murdochii DSM 12563 9142930 YP_003634211.1 CDS Bmur_1933 NC_014150.1 2203406 2203723 D KEGG: bhy:BHWA1_01396 hypothetical protein; hypothetical protein 2203406..2203723 Brachyspira murdochii DSM 12563 9142931 YP_003634212.1 CDS Bmur_1934 NC_014150.1 2203727 2212801 D KEGG: bhy:BHWA1_01395 hypothetical protein; hypothetical protein 2203727..2212801 Brachyspira murdochii DSM 12563 9142932 YP_003634213.1 CDS Bmur_1935 NC_014150.1 2212926 2213453 R KEGG: bhy:BHWA1_01394 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase complement(2212926..2213453) Brachyspira murdochii DSM 12563 9142933 YP_003634214.1 CDS Bmur_1936 NC_014150.1 2213707 2214255 D PFAM: flagellar basal body-associated protein FliL; KEGG: bhy:BHWA1_01393 flagellar basal body- associated protein; flagellar basal body protein FliL 2213707..2214255 Brachyspira murdochii DSM 12563 9142934 YP_003634215.1 CDS Bmur_1937 NC_014150.1 2214297 2215328 D KEGG: bhy:BHWA1_01392 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM 2214297..2215328 Brachyspira murdochii DSM 12563 9142935 YP_003634216.1 CDS Bmur_1938 NC_014150.1 2215333 2216412 D KEGG: bhy:BHWA1_01391 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN 2215333..2216412 Brachyspira murdochii DSM 12563 9142936 YP_003634217.1 CDS Bmur_1940 NC_014150.1 2216908 2217462 D KEGG: bhy:BHWA1_02578 hypothetical protein; hypothetical protein 2216908..2217462 Brachyspira murdochii DSM 12563 9142938 YP_003634218.1 CDS Bmur_1941 NC_014150.1 2217890 2218834 D PFAM: cell wall hydrolase/autolysin; KEGG: bhy:BHWA1_01424 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 2217890..2218834 Brachyspira murdochii DSM 12563 9142939 YP_003634219.1 CDS Bmur_1942 NC_014150.1 2218905 2219810 D PFAM: peptidase M23; KEGG: bhy:BHWA1_01423 peptidase; peptidase M23 2218905..2219810 Brachyspira murdochii DSM 12563 9142940 YP_003634220.1 CDS Bmur_1943 NC_014150.1 2219794 2220027 D KEGG: bhy:BHWA1_01422 hypothetical protein; hypothetical protein 2219794..2220027 Brachyspira murdochii DSM 12563 9142941 YP_003634221.1 CDS Bmur_1944 NC_014150.1 2220031 2221230 D TIGRFAM: nicotinate phosphoribosyltransferase; KEGG: bhy:BHWA1_01421 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 2220031..2221230 Brachyspira murdochii DSM 12563 9142942 YP_003634222.1 CDS Bmur_1945 NC_014150.1 2221840 2221983 D KEGG: bhy:BHWA1_02330 hypothetical protein; hypothetical protein 2221840..2221983 Brachyspira murdochii DSM 12563 9142943 YP_003634223.1 CDS Bmur_1946 NC_014150.1 2221987 2223099 R KEGG: bhy:BHWA1_02331 ATP phosphoribosyltransferase regulatory subunit; ATP phosphoribosyltransferase complement(2221987..2223099) Brachyspira murdochii DSM 12563 9142944 YP_003634224.1 CDS Bmur_1947 NC_014150.1 2223315 2223539 D KEGG: bhy:BHWA1_02313 hypothetical protein; hypothetical protein 2223315..2223539 Brachyspira murdochii DSM 12563 9142945 YP_003634225.1 CDS Bmur_1948 NC_014150.1 2223566 2223979 D KEGG: bhy:BHWA1_02314 hypothetical protein; hypothetical protein 2223566..2223979 Brachyspira murdochii DSM 12563 9142946 YP_003634226.1 CDS Bmur_1949 NC_014150.1 2223983 2224693 R PFAM: LrgB family protein; KEGG: bhy:BHWA1_02315 LrgB-like family protein; LrgB family protein complement(2223983..2224693) Brachyspira murdochii DSM 12563 9142947 YP_003634227.1 CDS Bmur_1950 NC_014150.1 2224723 2225082 R PFAM: LrgA family protein; KEGG: bhy:BHWA1_02316 effector of murein hydrolase LrgA; LrgA family protein complement(2224723..2225082) Brachyspira murdochii DSM 12563 9142948 YP_003634228.1 CDS Bmur_1951 NC_014150.1 2225289 2225465 D KEGG: bhy:BHWA1_02317 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 2225289..2225465 Brachyspira murdochii DSM 12563 9142949 YP_003634229.1 CDS Bmur_1952 NC_014150.1 2225620 2225940 D KEGG: bhy:BHWA1_02319 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; Preprotein translocase subunit SecE 2225620..2225940 Brachyspira murdochii DSM 12563 9142951 YP_003634230.1 CDS Bmur_1953 NC_014150.1 2225947 2226534 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: bhy:BHWA1_02320 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor 2225947..2226534 Brachyspira murdochii DSM 12563 9142952 YP_003634231.1 CDS Bmur_1954 NC_014150.1 2226562 2226984 D TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11-like; KEGG: bhy:BHWA1_02321 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 2226562..2226984 Brachyspira murdochii DSM 12563 9142953 YP_003634232.1 CDS Bmur_1955 NC_014150.1 2227051 2227752 D KEGG: bhy:BHWA1_02322 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 2227051..2227752 Brachyspira murdochii DSM 12563 9142954 YP_003634233.1 CDS Bmur_1956 NC_014150.1 2227857 2228381 D PFAM: ribosomal protein L10; KEGG: bhy:BHWA1_02323 50S ribosomal protein L10; 50S ribosomal protein L10 2227857..2228381 Brachyspira murdochii DSM 12563 9142955 YP_003634234.1 CDS Bmur_1957 NC_014150.1 2228444 2228830 D KEGG: bhy:BHWA1_02324 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2228444..2228830 Brachyspira murdochii DSM 12563 9142956 YP_003634235.1 CDS Bmur_1958 NC_014150.1 2228963 2232484 D TIGRFAM: DNA-directed RNA polymerase, beta subunit; KEGG: bhy:BHWA1_02325 DNA-directed RNA polymerase beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta 2228963..2232484 Brachyspira murdochii DSM 12563 9142957 YP_003634236.1 CDS Bmur_1959 NC_014150.1 2232504 2236706 D TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: bhy:BHWA1_02326 DNA-directed RNA polymerase beta' subunit; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 2232504..2236706 Brachyspira murdochii DSM 12563 9142958 YP_003634237.1 CDS Bmur_1960 NC_014150.1 2236792 2237733 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bhy:BHWA1_02327 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 2236792..2237733 Brachyspira murdochii DSM 12563 9142959 YP_003634238.1 CDS Bmur_1961 NC_014150.1 2237767 2238522 R KEGG: mar:MAE_18950 hypothetical protein; hypothetical protein complement(2237767..2238522) Brachyspira murdochii DSM 12563 9142960 YP_003634239.1 CDS Bmur_1962 NC_014150.1 2238519 2239298 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: emi:Emin_0686 DNA methylase N-4/N-6 domain- containing protein; DNA methylase N-4/N-6 domain-containing protein complement(2238519..2239298) Brachyspira murdochii DSM 12563 9142961 YP_003634240.1 CDS Bmur_1963 NC_014150.1 2239305 2240579 R TIGRFAM: histidinol dehydrogenase; KEGG: bhy:BHWA1_02328 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase complement(2239305..2240579) Brachyspira murdochii DSM 12563 9142962 YP_003634241.1 CDS Bmur_1964 NC_014150.1 2240592 2241212 R TIGRFAM: ATP phosphoribosyltransferase; KEGG: bhy:BHWA1_02329 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase complement(2240592..2241212) Brachyspira murdochii DSM 12563 9142963 YP_003634242.1 CDS Bmur_1965 NC_014150.1 2241500 2242330 R TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; KEGG: bhy:BHWA1_02182 pantoate-beta-alanine ligase; pantothenate synthase; PFAM: Pantoate-beta-alanine ligase; pantoate/beta-alanine ligase complement(2241500..2242330) Brachyspira murdochii DSM 12563 9142964 YP_003634243.1 CDS Bmur_1966 NC_014150.1 2242335 2242796 R KEGG: bhy:BHWA1_02183 hypothetical protein; hypothetical protein complement(2242335..2242796) Brachyspira murdochii DSM 12563 9142965 YP_003634244.1 CDS Bmur_1967 NC_014150.1 2243179 2243778 D KEGG: mat:MARTH_orf139 hypothetical protein; hypothetical protein 2243179..2243778 Brachyspira murdochii DSM 12563 9142966 YP_003634245.1 CDS Bmur_1968 NC_014150.1 2243773 2244747 R TIGRFAM: DNA-cytosine methyltransferase; KEGG: cce:Ccel_2549 DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(2243773..2244747) Brachyspira murdochii DSM 12563 9142967 YP_003634246.1 CDS Bmur_1969 NC_014150.1 2244895 2248089 R PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_02184 acriflavin resistance protein ; heavy metal efflux pump; cation/multidrug efflux pump; acriflavin resistance protein complement(2244895..2248089) Brachyspira murdochii DSM 12563 9142968 YP_003634247.1 CDS Bmur_1970 NC_014150.1 2248234 2249697 R KEGG: bhy:BHWA1_02185 integral outer membrane protein TolC, efflux pump component; integral outer membrane protein TolC, efflux pump component complement(2248234..2249697) Brachyspira murdochii DSM 12563 9142969 YP_003634248.1 CDS Bmur_1971 NC_014150.1 2249727 2250512 R PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_02186 hypothetical protein; TetR family transcriptional regulator complement(2249727..2250512) Brachyspira murdochii DSM 12563 9142970 YP_003634249.1 CDS Bmur_1972 NC_014150.1 2250738 2251073 D KEGG: bhy:BHWA1_02187 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 2250738..2251073 Brachyspira murdochii DSM 12563 9142971 YP_003634250.1 CDS Bmur_1973 NC_014150.1 2251216 2252127 D KEGG: bhy:BHWA1_02188 F0F1-type ATP synthase, subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 subunit A 2251216..2252127 Brachyspira murdochii DSM 12563 9142972 YP_003634251.1 CDS Bmur_1974 NC_014150.1 2252186 2252407 D KEGG: bhy:BHWA1_02189 F0F1-type ATP synthase, subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; ATP synthase F0 subunit C 2252186..2252407 Brachyspira murdochii DSM 12563 9142973 YP_003634252.1 CDS Bmur_1975 NC_014150.1 2252436 2252936 D KEGG: bhy:BHWA1_02190 F0F1-type ATP synthase, subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; ATP synthase F0 subunit B 2252436..2252936 Brachyspira murdochii DSM 12563 9142974 YP_003634253.1 CDS Bmur_1976 NC_014150.1 2252976 2253524 D KEGG: bhy:BHWA1_02191 F0F1-type ATP synthase, delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 2252976..2253524 Brachyspira murdochii DSM 12563 9142975 YP_003634254.1 CDS Bmur_1977 NC_014150.1 2253560 2254204 D KEGG: bhy:BHWA1_02192 F0F1-type ATP synthase, delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 2253560..2254204 Brachyspira murdochii DSM 12563 9142976 YP_003634255.1 CDS Bmur_1978 NC_014150.1 2254232 2255731 D TIGRFAM: ATP synthase F1, alpha subunit; KEGG: bhy:BHWA1_02193 F0F1-type ATP synthase, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha 2254232..2255731 Brachyspira murdochii DSM 12563 9142977 YP_003634256.1 CDS Bmur_1979 NC_014150.1 2255735 2256568 D PFAM: glycosyl transferase 14; KEGG: phe:Phep_1973 glycosyl transferase 14; glycosyl transferase 2255735..2256568 Brachyspira murdochii DSM 12563 9142978 YP_003634257.1 CDS Bmur_1980 NC_014150.1 2256597 2257475 D KEGG: bhy:BHWA1_02194 F0F1-type ATP synthase, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; ATP synthase F1 subunit gamma 2256597..2257475 Brachyspira murdochii DSM 12563 9142979 YP_003634258.1 CDS Bmur_1981 NC_014150.1 2257604 2257828 D KEGG: bhy:BHWA1_02196 ankyrin repeat- containing protein; ankyrin repeat-containing protein 2257604..2257828 Brachyspira murdochii DSM 12563 9142980 YP_003634259.1 CDS Bmur_1982 NC_014150.1 2257889 2258362 D KEGG: bhy:BHWA1_02196 ankyrin repeat- containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2257889..2258362 Brachyspira murdochii DSM 12563 9142981 YP_003634260.1 CDS Bmur_1983 NC_014150.1 2259015 2259776 D PFAM: ankyrin; KEGG: bhy:BHWA1_02196 ankyrin repeat- containing protein; ankyrin 2259015..2259776 Brachyspira murdochii DSM 12563 9142982 YP_003634261.1 CDS Bmur_1984 NC_014150.1 2260411 2261532 R KEGG: bhy:BHWA1_02208 inositol-5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; GMP reductase complement(2260411..2261532) Brachyspira murdochii DSM 12563 9142983 YP_003634262.1 CDS Bmur_1985 NC_014150.1 2261816 2262877 D KEGG: bhy:BHWA1_02209 hypothetical protein; hypothetical protein 2261816..2262877 Brachyspira murdochii DSM 12563 9142984 YP_003634263.1 CDS Bmur_1986 NC_014150.1 2262925 2263458 R PFAM: Rubrerythrin; KEGG: bhy:BHWA1_02210 rubrerythrin; rubrerythrin complement(2262925..2263458) Brachyspira murdochii DSM 12563 9142985 YP_003634264.1 CDS Bmur_1987 NC_014150.1 2263507 2264103 R KEGG: bhy:BHWA1_02211 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; superoxide dismutase complement(2263507..2264103) Brachyspira murdochii DSM 12563 9142986 YP_003634265.1 CDS Bmur_1988 NC_014150.1 2264273 2265313 R KEGG: bhy:BHWA1_02212 hypothetical protein; hypothetical protein complement(2264273..2265313) Brachyspira murdochii DSM 12563 9142987 YP_003634266.1 CDS Bmur_1989 NC_014150.1 2265323 2266717 R KEGG: bhy:BHWA1_02213 DNA polymerase III delta prime subunit; DNA polymerase III delta prime subunit complement(2265323..2266717) Brachyspira murdochii DSM 12563 9142988 YP_003634267.1 CDS Bmur_1990 NC_014150.1 2266904 2270422 D KEGG: bhy:BHWA1_02215 hypothetical protein; hypothetical protein 2266904..2270422 Brachyspira murdochii DSM 12563 9142989 YP_003634268.1 CDS Bmur_1991 NC_014150.1 2270447 2271145 D KEGG: bhy:BHWA1_02216 ribonuclease HII; PFAM: ribonuclease HII/HIII; ribonuclease H 2270447..2271145 Brachyspira murdochii DSM 12563 9142990 YP_003634269.1 CDS Bmur_1992 NC_014150.1 2271271 2271606 R KEGG: bhy:BHWA1_02286 hypothetical protein; hypothetical protein complement(2271271..2271606) Brachyspira murdochii DSM 12563 9142991 YP_003634270.1 CDS Bmur_1993 NC_014150.1 2271760 2271930 R KEGG: bhy:BHWA1_02288 hypothetical protein; hypothetical protein complement(2271760..2271930) Brachyspira murdochii DSM 12563 9142992 YP_003634271.1 CDS Bmur_1994 NC_014150.1 2271953 2273038 R KEGG: bhy:BHWA1_02289 hypothetical protein; hypothetical protein complement(2271953..2273038) Brachyspira murdochii DSM 12563 9142993 YP_003634272.1 CDS Bmur_1995 NC_014150.1 2273166 2273813 R KEGG: bhy:BHWA1_02290 invasin; opacity protein-like surface antigens; invasin; opacity protein-like surface antigen complement(2273166..2273813) Brachyspira murdochii DSM 12563 9142994 YP_003634273.1 CDS Bmur_1996 NC_014150.1 2273824 2274489 R KEGG: bhy:BHWA1_02291 tia invasion determinant; tia invasion determinant complement(2273824..2274489) Brachyspira murdochii DSM 12563 9142995 YP_003634274.1 CDS Bmur_1997 NC_014150.1 2274510 2275241 R KEGG: bhy:BHWA1_02292 hypothetical protein; hypothetical protein complement(2274510..2275241) Brachyspira murdochii DSM 12563 9142996 YP_003634275.1 CDS Bmur_1998 NC_014150.1 2275258 2276217 R KEGG: bhy:BHWA1_02293 hypothetical protein; hypothetical protein complement(2275258..2276217) Brachyspira murdochii DSM 12563 9142997 YP_003634276.1 CDS Bmur_1999 NC_014150.1 2276236 2276757 R KEGG: bhy:BHWA1_02294 hypothetical protein; hypothetical protein complement(2276236..2276757) Brachyspira murdochii DSM 12563 9142998 YP_003634277.1 CDS Bmur_2000 NC_014150.1 2277031 2277450 D KEGG: bhy:BHWA1_02295 hypothetical protein; hypothetical protein 2277031..2277450 Brachyspira murdochii DSM 12563 9142999 YP_003634278.1 CDS Bmur_2001 NC_014150.1 2277480 2278505 D KEGG: bhy:BHWA1_02296 D polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 2277480..2278505 Brachyspira murdochii DSM 12563 9143000 YP_003634279.1 CDS Bmur_2003 NC_014150.1 2280007 2280681 D PFAM: Late competence development protein ComFB; KEGG: bhy:BHWA1_02297 hypothetical protein; Late competence development protein ComFB 2280007..2280681 Brachyspira murdochii DSM 12563 9143002 YP_003634280.1 CDS Bmur_2004 NC_014150.1 2280751 2281302 D KEGG: bhy:BHWA1_02298 hypothetical protein; hypothetical protein 2280751..2281302 Brachyspira murdochii DSM 12563 9143003 YP_003634281.1 CDS Bmur_2005 NC_014150.1 2281426 2281812 D PFAM: ferric-uptake regulator; KEGG: bhy:BHWA1_02299 ferric uptake regulator; ferric uptake regulator, Fur family 2281426..2281812 Brachyspira murdochii DSM 12563 9143004 YP_003634282.1 CDS Bmur_2006 NC_014150.1 2281942 2283528 D PFAM: Domain of unknown function DUF1957; glycoside hydrolase 57; KEGG: bhy:BHWA1_02300 glycosyl hydrolase 57; hypothetical protein 2281942..2283528 Brachyspira murdochii DSM 12563 9143005 YP_003634283.1 CDS Bmur_2007 NC_014150.1 2283634 2284155 R KEGG: hypothetical protein; hypothetical protein complement(2283634..2284155) Brachyspira murdochii DSM 12563 9143006 YP_003634284.1 CDS Bmur_2008 NC_014150.1 2284858 2286666 R KEGG: bhy:BHWA1_02304 peptidoglycan- binding LysM:peptidase M23B family; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; peptidase M23 complement(2284858..2286666) Brachyspira murdochii DSM 12563 9143008 YP_003634285.1 CDS Bmur_2009 NC_014150.1 2286693 2286971 R PFAM: acylphosphatase; KEGG: bhy:BHWA1_02305 acylphosphatase; acylphosphatase complement(2286693..2286971) Brachyspira murdochii DSM 12563 9143009 YP_003634286.1 CDS Bmur_2010 NC_014150.1 2287057 2287656 D PFAM: methyltransferase small; KEGG: bhy:BHWA1_02306 methyltransferase small domain protein; methyltransferase small 2287057..2287656 Brachyspira murdochii DSM 12563 9143010 YP_003634287.1 CDS Bmur_2011 NC_014150.1 2287647 2288315 R KEGG: bhy:BHWA1_02307 phosphoesterase, phosphatidic acid phosphatase-related; PAP2 superfamily; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase complement(2287647..2288315) Brachyspira murdochii DSM 12563 9143011 YP_003634288.1 CDS Bmur_2012 NC_014150.1 2288513 2289265 D KEGG: bhy:BHWA1_02308 pyridoxine kinase; pyridoxine kinase 2288513..2289265 Brachyspira murdochii DSM 12563 9143012 YP_003634289.1 CDS Bmur_2013 NC_014150.1 2289253 2290296 D KEGG: bhy:BHWA1_02309 hypothetical protein; hypothetical protein 2289253..2290296 Brachyspira murdochii DSM 12563 9143013 YP_003634290.1 CDS Bmur_2014 NC_014150.1 2290442 2291620 R KEGG: bhy:BHWA1_01152 hypothetical protein; PFAM: protein of unknown function DUF815; ATPase AAA; SMART: AAA ATPase; hypothetical protein complement(2290442..2291620) Brachyspira murdochii DSM 12563 9143014 YP_003634291.1 CDS Bmur_2015 NC_014150.1 2291851 2293512 D KEGG: bhy:BHWA1_01153 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2291851..2293512 Brachyspira murdochii DSM 12563 9143015 YP_003634292.1 CDS Bmur_2016 NC_014150.1 2293578 2294705 R KEGG: bhy:BHWA1_02426 hypothetical protein; hypothetical protein complement(2293578..2294705) Brachyspira murdochii DSM 12563 9143016 YP_003634293.1 CDS Bmur_2017 NC_014150.1 2295186 2295995 D KEGG: bhy:BHWA1_02217 hydrolase, HAD superfamily; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 2295186..2295995 Brachyspira murdochii DSM 12563 9143017 YP_003634294.1 CDS Bmur_2018 NC_014150.1 2296234 2297544 D PFAM: trigger factor domain; KEGG: bhy:BHWA1_02220 trigger factor; trigger factor domain-containing protein 2296234..2297544 Brachyspira murdochii DSM 12563 9143019 YP_003634295.1 CDS Bmur_2019 NC_014150.1 2297562 2298164 D TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: bhy:BHWA1_02221 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 2297562..2298164 Brachyspira murdochii DSM 12563 9143020 YP_003634296.1 CDS Bmur_2020 NC_014150.1 2298337 2299572 D TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; Clp ATPase-like; KEGG: bhy:BHWA1_02222 ATP-dependent protease ATP- binding subunit; SMART: AAA ATPase; hypothetical protein 2298337..2299572 Brachyspira murdochii DSM 12563 9143021 YP_003634297.1 CDS Bmur_2021 NC_014150.1 2299634 2300197 D TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW domain protein; Elongation factor P/YeiP protein; KEGG: bhy:BHWA1_02223 translation elongation factor P (EF-P); SMART: Elongation factor P; translation elongation factor P 2299634..2300197 Brachyspira murdochii DSM 12563 9143022 YP_003634298.1 CDS Bmur_2022 NC_014150.1 2300197 2300760 D KEGG: bhy:BHWA1_02224 hypothetical protein; hypothetical protein 2300197..2300760 Brachyspira murdochii DSM 12563 9143023 YP_003634299.1 CDS Bmur_2023 NC_014150.1 2300945 2302540 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02225 ABC-type oligopeptide transport system, periplasmic component; ABC transporter substrate-binding protein complement(2300945..2302540) Brachyspira murdochii DSM 12563 9143024 YP_003634300.1 CDS Bmur_2024 NC_014150.1 2302825 2304435 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02226 ABC-type oligopeptide transport system, periplasmic component; ABC transporter substrate-binding protein complement(2302825..2304435) Brachyspira murdochii DSM 12563 9143025 YP_003634301.1 CDS Bmur_2025 NC_014150.1 2304786 2306135 D PFAM: acetyl-CoA hydrolase/transferase; KEGG: bhy:BHWA1_02227 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 2304786..2306135 Brachyspira murdochii DSM 12563 9143026 YP_003634302.1 CDS Bmur_2026 NC_014150.1 2306201 2308126 D PFAM: acyl-CoA dehydrogenase domain protein; Rubredoxin-type Fe(Cys)4 protein; electron transfer flavoprotein alpha subunit; KEGG: bhy:BHWA1_02228 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 2306201..2308126 Brachyspira murdochii DSM 12563 9143027 YP_003634303.1 CDS Bmur_2027 NC_014150.1 2308162 2309376 D KEGG: bhy:BHWA1_02229 flavoprotein; PFAM: flavodoxin/nitric oxide synthase; SMART: beta-lactamase domain protein; flavodoxin/nitric oxide synthase 2308162..2309376 Brachyspira murdochii DSM 12563 9143028 YP_003634304.1 CDS Bmur_2028 NC_014150.1 2309515 2311137 D KEGG: bhy:BHWA1_02230 hypothetical protein; hypothetical protein 2309515..2311137 Brachyspira murdochii DSM 12563 9143029 YP_003634305.1 CDS Bmur_2029 NC_014150.1 2311219 2312295 D KEGG: bhy:BHWA1_02231 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 2311219..2312295 Brachyspira murdochii DSM 12563 9143030 YP_003634306.1 CDS Bmur_2030 NC_014150.1 2312320 2313012 D KEGG: bhy:BHWA1_02232 hypothetical protein; hypothetical protein 2312320..2313012 Brachyspira murdochii DSM 12563 9143031 YP_003634307.1 CDS Bmur_2031 NC_014150.1 2313034 2314464 D KEGG: bhy:BHWA1_02233 radical SAM protein ; predicted Fe-S oxidoreductase; radical SAM protein 2313034..2314464 Brachyspira murdochii DSM 12563 9143032 YP_003634308.1 CDS Bmur_2032 NC_014150.1 2314474 2314905 D KEGG: bhy:BHWA1_02234 hypothetical protein; hypothetical protein 2314474..2314905 Brachyspira murdochii DSM 12563 9143033 YP_003634309.1 CDS Bmur_2033 NC_014150.1 2315000 2315986 R PFAM: nucleotidyl transferase; KEGG: bhy:BHWA1_02235 nucleotidyltransferase; nucleotidyl transferase complement(2315000..2315986) Brachyspira murdochii DSM 12563 9143034 YP_003634310.1 CDS Bmur_2034 NC_014150.1 2316066 2316620 R KEGG: bhy:BHWA1_02236 ThiJ/PfpI domain-containing protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; DJ-1 family protein complement(2316066..2316620) Brachyspira murdochii DSM 12563 9143035 YP_003634311.1 CDS Bmur_2035 NC_014150.1 2316700 2317284 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_02237 TPR domain-containing protein; hypothetical protein complement(2316700..2317284) Brachyspira murdochii DSM 12563 9143036 YP_003634312.1 CDS Bmur_2036 NC_014150.1 2317373 2318005 R TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: bhy:BHWA1_02238 2-keto-3-deoxy-6- phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(2317373..2318005) Brachyspira murdochii DSM 12563 9143037 YP_003634313.1 CDS Bmur_2037 NC_014150.1 2318049 2319455 R KEGG: bhy:BHWA1_02239 glucuronate isomerase; PFAM: glucuronate isomerase; glucuronate isomerase complement(2318049..2319455) Brachyspira murdochii DSM 12563 9143038 YP_003634314.1 CDS Bmur_2038 NC_014150.1 2319537 2320604 R TIGRFAM: mannonate dehydratase; KEGG: bhy:BHWA1_02240 mannonate dehydratase; PFAM: mannonate dehydratase; mannonate dehydratase complement(2319537..2320604) Brachyspira murdochii DSM 12563 9143039 YP_003634315.1 CDS Bmur_2039 NC_014150.1 2320624 2322252 R PFAM: mannitol dehydrogenase domain; mannitol dehydrogenase rossman domain; KEGG: bhy:BHWA1_02241 mannitol-1- phosphate/altronate dehydrogenase; mannitol dehydrogenase complement(2320624..2322252) Brachyspira murdochii DSM 12563 9143040 YP_003634316.1 CDS Bmur_2040 NC_014150.1 2322326 2323765 R KEGG: bhy:BHWA1_02242 sugar/sodium symporter; sugar/sodium symporter complement(2322326..2323765) Brachyspira murdochii DSM 12563 9143041 YP_003634317.1 CDS Bmur_2041 NC_014150.1 2323839 2325644 R KEGG: bhy:BHWA1_02243 beta-D-glucuronidase; PFAM: glycoside hydrolase 2 TIM barrel; glycoside hydrolase 2 sugar binding; glycoside hydrolase 2 immunoglobulin domain protein beta- sandwich; beta-glucuronidase complement(2323839..2325644) Brachyspira murdochii DSM 12563 9143042 YP_003634318.1 CDS Bmur_2042 NC_014150.1 2325686 2326558 R KEGG: bhy:BHWA1_02244 hypothetical protein; hypothetical protein complement(2325686..2326558) Brachyspira murdochii DSM 12563 9143043 YP_003634319.1 CDS Bmur_2043 NC_014150.1 2326739 2327446 D KEGG: bhy:BHWA1_02245 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein; GntR family transcriptional regulator 2326739..2327446 Brachyspira murdochii DSM 12563 9143044 YP_003634320.1 CDS Bmur_2044 NC_014150.1 2327448 2328470 R PFAM: PfkB domain protein; KEGG: bhy:BHWA1_02246 carbohydrate kinase, PfkB family; PfkB domain-containing protein complement(2327448..2328470) Brachyspira murdochii DSM 12563 9143045 YP_003634321.1 CDS Bmur_2046 NC_014150.1 2329142 2329420 R KEGG: bhy:BHWA1_02248 hypothetical protein; hypothetical protein complement(2329142..2329420) Brachyspira murdochii DSM 12563 9143047 YP_003634322.1 CDS Bmur_2047 NC_014150.1 2329608 2329895 R TIGRFAM: redox-active disulfide protein 2; KEGG: bhy:BHWA1_02249 hypothetical protein; redox-active disulfide protein 2 complement(2329608..2329895) Brachyspira murdochii DSM 12563 9143048 YP_003634323.1 CDS Bmur_2048 NC_014150.1 2329936 2330946 R PFAM: permease; KEGG: bhy:BHWA1_02250 predicted permease; permease complement(2329936..2330946) Brachyspira murdochii DSM 12563 9143049 YP_003634324.1 CDS Bmur_2050 NC_014150.1 2332165 2332488 R KEGG: bhy:BHWA1_02252 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator complement(2332165..2332488) Brachyspira murdochii DSM 12563 9143051 YP_003634325.1 CDS Bmur_2051 NC_014150.1 2332659 2333684 D KEGG: bhy:BHWA1_02253 aldose 1-epimerase; PFAM: Aldose 1-epimerase; aldose 1-epimerase 2332659..2333684 Brachyspira murdochii DSM 12563 9143052 YP_003634326.1 CDS Bmur_2052 NC_014150.1 2333722 2334357 D PFAM: methyltransferase type 12; KEGG: bhy:BHWA1_02254 methyltransferase type 12 domain protein; methyltransferase type 12 2333722..2334357 Brachyspira murdochii DSM 12563 9143053 YP_003634327.1 CDS Bmur_2053 NC_014150.1 2334445 2335683 R PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_02257 cinnamyl-alcohol dehydrogenase ELI3-2 (cad); molecular chaperone GroES complement(2334445..2335683) Brachyspira murdochii DSM 12563 9143054 YP_003634328.1 CDS Bmur_2054 NC_014150.1 2336435 2336836 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_01643 TPR domain-containing protein; hypothetical protein 2336435..2336836 Brachyspira murdochii DSM 12563 9143055 YP_003634329.1 CDS Bmur_2055 NC_014150.1 2337182 2339743 R KEGG: bhy:BHWA1_02260 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(2337182..2339743) Brachyspira murdochii DSM 12563 9143056 YP_003634330.1 CDS Bmur_2056 NC_014150.1 2340213 2340578 R KEGG: bhy:BHWA1_02261 hypothetical protein; hypothetical protein complement(2340213..2340578) Brachyspira murdochii DSM 12563 9143057 YP_003634331.1 CDS Bmur_2057 NC_014150.1 2340801 2341826 R KEGG: bhy:BHWA1_02262 ATPase; ATPase complement(2340801..2341826) Brachyspira murdochii DSM 12563 9143058 YP_003634332.1 CDS Bmur_2058 NC_014150.1 2341957 2342673 D TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: bhy:BHWA1_02263 phosphoribosylformimino-5- aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2341957..2342673 Brachyspira murdochii DSM 12563 9143059 YP_003634333.1 CDS Bmur_2059 NC_014150.1 2342701 2343657 D TIGRFAM: methyltransferase FkbM family; KEGG: bhy:BHWA1_02264 methyltransferase; FkbM family methyltransferase 2342701..2343657 Brachyspira murdochii DSM 12563 9143060 YP_003634334.1 CDS Bmur_2060 NC_014150.1 2343769 2344275 D PFAM: protein of unknown function DUF583; KEGG: bhy:BHWA1_02265 hypothetical protein; hypothetical protein 2343769..2344275 Brachyspira murdochii DSM 12563 9143061 YP_003634335.1 CDS Bmur_2061 NC_014150.1 2344295 2345089 D KEGG: bhy:BHWA1_02266 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 2344295..2345089 Brachyspira murdochii DSM 12563 9143062 YP_003634336.1 CDS Bmur_2062 NC_014150.1 2345179 2346009 D KEGG: bhy:BHWA1_02267 TPR domain-containing protein; hypothetical protein 2345179..2346009 Brachyspira murdochii DSM 12563 9143063 YP_003634337.1 CDS Bmur_2063 NC_014150.1 2346142 2347074 D KEGG: bhy:BHWA1_01341 hypothetical protein; hypothetical protein 2346142..2347074 Brachyspira murdochii DSM 12563 9143064 YP_003634338.1 CDS Bmur_2064 NC_014150.1 2347297 2347971 D TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, beta subunit; KEGG: bhy:BHWA1_02268 L-serine dehydratase, iron- sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid- binding ACT domain protein; L-serine dehydratase, iron-sulfur-dependent subunit beta 2347297..2347971 Brachyspira murdochii DSM 12563 9143065 YP_003634339.1 CDS Bmur_2065 NC_014150.1 2348027 2348908 D TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, alpha subunit; KEGG: bhy:BHWA1_02269 L-serine dehydratase, iron- sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; L-serine dehydratase, iron-sulfur-dependent subunit alpha 2348027..2348908 Brachyspira murdochii DSM 12563 9143066 YP_003634340.1 CDS Bmur_2066 NC_014150.1 2349205 2350179 D KEGG: bhy:BHWA1_02271 ankyrin repeat- containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2349205..2350179 Brachyspira murdochii DSM 12563 9143067 YP_003634341.1 CDS Bmur_2067 NC_014150.1 2350264 2350602 D KEGG: bhy:BHWA1_02272 hypothetical protein; hypothetical protein 2350264..2350602 Brachyspira murdochii DSM 12563 9143068 YP_003634342.1 CDS Bmur_2068 NC_014150.1 2350738 2351439 R KEGG: bhy:BHWA1_02273 hypothetical protein; hypothetical protein complement(2350738..2351439) Brachyspira murdochii DSM 12563 9143069 YP_003634343.1 CDS Bmur_2069 NC_014150.1 2351710 2352396 D PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: bhy:BHWA1_02274 potassium uptake protein TrkA; TrkA-N domain-containing protein 2351710..2352396 Brachyspira murdochii DSM 12563 9143070 YP_003634344.1 CDS Bmur_2070 NC_014150.1 2352399 2352614 D KEGG: bhy:BHWA1_02275 hypothetical protein; hypothetical protein 2352399..2352614 Brachyspira murdochii DSM 12563 9143071 YP_003634345.1 CDS Bmur_2071 NC_014150.1 2352823 2354514 D KEGG: bhy:BHWA1_02285 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; glucose-1,6-bisphosphate synthase 2352823..2354514 Brachyspira murdochii DSM 12563 9143072 YP_003634346.1 CDS Bmur_2072 NC_014150.1 2354938 2357028 R KEGG: bhy:BHWA1_02283 RecG-like DNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase complement(2354938..2357028) Brachyspira murdochii DSM 12563 9143073 YP_003634347.1 CDS Bmur_2073 NC_014150.1 2357051 2357530 R PFAM: protein of unknown function DUF1232; KEGG: bhy:BHWA1_02282 hypothetical protein; hypothetical protein complement(2357051..2357530) Brachyspira murdochii DSM 12563 9143074 YP_003634348.1 CDS Bmur_2074 NC_014150.1 2357673 2358431 D PFAM: type IV pilus assembly PilZ; KEGG: bhy:BHWA1_02281 PilZ domain containing protein; type IV pilus assembly PilZ 2357673..2358431 Brachyspira murdochii DSM 12563 9143075 YP_003634349.1 CDS Bmur_2075 NC_014150.1 2358412 2359017 D KEGG: bhy:BHWA1_02280 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 2358412..2359017 Brachyspira murdochii DSM 12563 9143076 YP_003634350.1 CDS Bmur_2076 NC_014150.1 2359033 2359545 R KEGG: bhy:BHWA1_02278 chemotaxis signal transduction protein; PFAM: CheW domain protein; SMART: CheW domain protein; chemotaxis protein CheW complement(2359033..2359545) Brachyspira murdochii DSM 12563 9143077 YP_003634351.1 CDS Bmur_2077 NC_014150.1 2360284 2361468 R PFAM: sodium/hydrogen exchanger; KEGG: bhy:BHWA1_01437 Na(+)/H(+) antiporter; sodium/hydrogen exchanger complement(2360284..2361468) Brachyspira murdochii DSM 12563 9143078 YP_003634352.1 CDS Bmur_2078 NC_014150.1 2361933 2363123 D KEGG: uue:UUR10_0159 hypothetical protein; hypothetical protein 2361933..2363123 Brachyspira murdochii DSM 12563 9143079 YP_003634353.1 CDS Bmur_2079 NC_014150.1 2363144 2363866 D KEGG: bhy:BHWA1_01635 hypothetical protein; hypothetical protein 2363144..2363866 Brachyspira murdochii DSM 12563 9143080 YP_003634354.1 CDS Bmur_2080 NC_014150.1 2363999 2366005 D PFAM: ankyrin; KEGG: bhy:BHWA1_02162 ankyrin repeat- containing protein; ankyrin 2363999..2366005 Brachyspira murdochii DSM 12563 9143081 YP_003634355.1 CDS Bmur_2081 NC_014150.1 2366188 2366517 D PFAM: transcriptional regulator PadR family protein; KEGG: cbe:Cbei_3914 PadR-like family transcriptional regulator; PadR family transcriptional regulator 2366188..2366517 Brachyspira murdochii DSM 12563 9143082 YP_003634356.1 CDS Bmur_2082 NC_014150.1 2366541 2367185 D KEGG: cbk:CLL_A2660 hypothetical protein; hypothetical protein 2366541..2367185 Brachyspira murdochii DSM 12563 9143083 YP_003634357.1 CDS Bmur_2083 NC_014150.1 2367189 2367845 D KEGG: bhy:BHWA1_02360 hypothetical protein; hypothetical protein 2367189..2367845 Brachyspira murdochii DSM 12563 9143084 YP_003634358.1 CDS Bmur_2084 NC_014150.1 2367932 2368936 D KEGG: bhy:BHWA1_02361 hypothetical protein; hypothetical protein 2367932..2368936 Brachyspira murdochii DSM 12563 9143085 YP_003634359.1 CDS Bmur_2085 NC_014150.1 2368957 2369616 D KEGG: hypothetical protein; hypothetical protein 2368957..2369616 Brachyspira murdochii DSM 12563 9143086 YP_003634360.1 CDS Bmur_2086 NC_014150.1 2369651 2370373 D KEGG: bhy:BHWA1_02363 hypothetical protein; hypothetical protein 2369651..2370373 Brachyspira murdochii DSM 12563 9143087 YP_003634361.1 CDS Bmur_2087 NC_014150.1 2370623 2371399 D KEGG: bhy:BHWA1_02364 hypothetical protein; hypothetical protein 2370623..2371399 Brachyspira murdochii DSM 12563 9143088 YP_003634362.1 CDS Bmur_2088 NC_014150.1 2371402 2372076 D KEGG: bhy:BHWA1_02365 ABC transporter ATP-binding protein YbbA; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2371402..2372076 Brachyspira murdochii DSM 12563 9143089 YP_003634363.1 CDS Bmur_2089 NC_014150.1 2372609 2373826 D PFAM: protein of unknown function DUF214; KEGG: bhy:BHWA1_02366 hypothetical protein; hypothetical protein 2372609..2373826 Brachyspira murdochii DSM 12563 9143090 YP_003634364.1 CDS Bmur_2090 NC_014150.1 2373819 2374502 D KEGG: bhy:BHWA1_02367 hypothetical protein; hypothetical protein 2373819..2374502 Brachyspira murdochii DSM 12563 9143091 YP_003634365.1 CDS Bmur_2091 NC_014150.1 2374510 2375568 D KEGG: bhy:BHWA1_02368 hypothetical protein; hypothetical protein 2374510..2375568 Brachyspira murdochii DSM 12563 9143092 YP_003634366.1 CDS Bmur_2092 NC_014150.1 2375871 2376302 R KEGG: bhy:BHWA1_02083 hypothetical protein; hypothetical protein complement(2375871..2376302) Brachyspira murdochii DSM 12563 9143093 YP_003634367.1 CDS Bmur_2093 NC_014150.1 2376621 2377622 D PFAM: ApbE family lipoprotein; KEGG: bhy:BHWA1_02084 thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein 2376621..2377622 Brachyspira murdochii DSM 12563 9143094 YP_003634368.1 CDS Bmur_2094 NC_014150.1 2377623 2378192 R KEGG: bhy:BHWA1_02082 N6-adenine-specific methylase; TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase; methyltransferase complement(2377623..2378192) Brachyspira murdochii DSM 12563 9143095 YP_003634369.1 CDS Bmur_2095 NC_014150.1 2378212 2378886 R KEGG: bhy:BHWA1_02081 hypothetical protein; hypothetical protein complement(2378212..2378886) Brachyspira murdochii DSM 12563 9143096 YP_003634370.1 CDS Bmur_2096 NC_014150.1 2378979 2380139 R TIGRFAM: homoserine O-acetyltransferase; KEGG: bhy:BHWA1_01510 homoserine O- acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase complement(2378979..2380139) Brachyspira murdochii DSM 12563 9143097 YP_003634371.1 CDS Bmur_2097 NC_014150.1 2380218 2381513 R TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bhy:BHWA1_01511 O-acetylhomoserine/O- acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(2380218..2381513) Brachyspira murdochii DSM 12563 9143098 YP_003634372.1 CDS Bmur_2098 NC_014150.1 2382236 2382970 D PFAM: ankyrin; KEGG: bhy:BHWA1_02198 ankyrin repeat- containing protein; ankyrin 2382236..2382970 Brachyspira murdochii DSM 12563 9143099 YP_003634373.1 CDS Bmur_2099 NC_014150.1 2383386 2384651 R PFAM: protein of unknown function UPF0027; KEGG: bhy:BHWA1_02202 hypothetical protein; hypothetical protein complement(2383386..2384651) Brachyspira murdochii DSM 12563 9143100 YP_003634374.1 CDS Bmur_2100 NC_014150.1 2384815 2384976 R KEGG: bhy:BHWA1_02689 alpha-1,2- fucosyltransferase; glycosyl transferase, family 11; hypothetical protein complement(2384815..2384976) Brachyspira murdochii DSM 12563 9143101 YP_003634375.1 CDS Bmur_2101 NC_014150.1 2385046 2385774 R PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase complement(2385046..2385774) Brachyspira murdochii DSM 12563 9143102 YP_003634376.1 CDS Bmur_2102 NC_014150.1 2386011 2386919 D KEGG: bhy:BHWA1_02201 D repair photolyase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2386011..2386919 Brachyspira murdochii DSM 12563 9143103 YP_003634377.1 CDS Bmur_2103 NC_014150.1 2386982 2387122 D KEGG: hit:NTHI1750 glycosyl transferase; hypothetical protein 2386982..2387122 Brachyspira murdochii DSM 12563 9143104 YP_003634378.1 CDS Bmur_2104 NC_014150.1 2387115 2388116 D PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_02200 lipopolysaccharide 1,2-glucosyltransferase RfaJ; glycosyl transferase 2387115..2388116 Brachyspira murdochii DSM 12563 9143105 YP_003634379.1 CDS Bmur_2105 NC_014150.1 2388734 2390908 D KEGG: bhy:BHWA1_02203 fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar- specific permease EIIA 1 domain; phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose subfamily transporter subunit IIA 2388734..2390908 Brachyspira murdochii DSM 12563 9143106 YP_003634380.1 CDS Bmur_2106 NC_014150.1 2391130 2392935 D KEGG: bhy:BHWA1_02204 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 2391130..2392935 Brachyspira murdochii DSM 12563 9143107 YP_003634381.1 CDS Bmur_2107 NC_014150.1 2393412 2394866 D KEGG: bhy:BHWA1_02207 hypothetical protein; hypothetical protein 2393412..2394866 Brachyspira murdochii DSM 12563 9143108 YP_003634382.1 CDS Bmur_2108 NC_014150.1 2394945 2395313 R PFAM: protein of unknown function DUF486; KEGG: bhy:BHWA1_02206 hypothetical protein; hypothetical protein complement(2394945..2395313) Brachyspira murdochii DSM 12563 9143109 YP_003634383.1 CDS Bmur_2109 NC_014150.1 2396748 2399882 D PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_02310 acriflavin resistance protein; acriflavin resistance protein 2396748..2399882 Brachyspira murdochii DSM 12563 9143110 YP_003634384.1 CDS Bmur_2110 NC_014150.1 2399997 2400971 D SMART: Rhodanese domain protein; KEGG: msu:MS1140 SseA protein; Rhodanese domain-containing protein 2399997..2400971 Brachyspira murdochii DSM 12563 9143111 YP_003634385.1 CDS Bmur_2111 NC_014150.1 2401025 2401474 R KEGG: cbf:CLI_1228 hypothetical protein; hypothetical protein complement(2401025..2401474) Brachyspira murdochii DSM 12563 9143112 YP_003634386.1 CDS Bmur_2112 NC_014150.1 2401550 2402545 R KEGG: hor:Hore_04570 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(2401550..2402545) Brachyspira murdochii DSM 12563 9143113 YP_003634387.1 CDS Bmur_2113 NC_014150.1 2402734 2403798 D PFAM: basic membrane lipoprotein; KEGG: basic membrane lipoprotein; basic membrane lipoprotein 2402734..2403798 Brachyspira murdochii DSM 12563 9143114 YP_003634388.1 CDS Bmur_2114 NC_014150.1 2403906 2405426 D KEGG: ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2403906..2405426 Brachyspira murdochii DSM 12563 9143115 YP_003634389.1 CDS Bmur_2115 NC_014150.1 2405465 2406526 D PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; inner-membrane translocator 2405465..2406526 Brachyspira murdochii DSM 12563 9143116 YP_003634390.1 CDS Bmur_2116 NC_014150.1 2406549 2407487 D PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; inner-membrane translocator 2406549..2407487 Brachyspira murdochii DSM 12563 9143117 YP_003634391.1 CDS Bmur_2117 NC_014150.1 2407543 2408475 D KEGG: ribosylpyrimidine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase 2407543..2408475 Brachyspira murdochii DSM 12563 9143118 YP_003634392.1 CDS Bmur_2118 NC_014150.1 2408492 2409760 D KEGG: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase 2408492..2409760 Brachyspira murdochii DSM 12563 9143119 YP_003634393.1 CDS Bmur_2119 NC_014150.1 2409792 2410544 D PFAM: protein of unknown function DUF1355; KEGG: protein of unknown function DUF1355; hypothetical protein 2409792..2410544 Brachyspira murdochii DSM 12563 9143120 YP_003634394.1 CDS Bmur_2120 NC_014150.1 2410558 2411430 D PFAM: PfkB domain protein; KEGG: bhy:BHWA1_02311 ribokinase; PfkB domain-containing protein 2410558..2411430 Brachyspira murdochii DSM 12563 9143121 YP_003634395.1 CDS Bmur_2121 NC_014150.1 2412561 2412788 D KEGG: bhy:BHWA1_01157 hypothetical protein; hypothetical protein 2412561..2412788 Brachyspira murdochii DSM 12563 9143122 YP_003634396.1 CDS Bmur_2122 NC_014150.1 2412747 2413730 R KEGG: bhy:BHWA1_01158 hypothetical protein; hypothetical protein complement(2412747..2413730) Brachyspira murdochii DSM 12563 9143123 YP_003634397.1 CDS Bmur_2123 NC_014150.1 2413742 2414062 R KEGG: bhy:BHWA1_01159 hypothetical protein; hypothetical protein complement(2413742..2414062) Brachyspira murdochii DSM 12563 9143124 YP_003634398.1 CDS Bmur_2124 NC_014150.1 2414372 2414791 D KEGG: bhy:BHWA1_01185 hypothetical protein; hypothetical protein 2414372..2414791 Brachyspira murdochii DSM 12563 9143125 YP_003634399.1 CDS Bmur_2125 NC_014150.1 2415131 2416792 R KEGG: bhy:BHWA1_02387 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; formate--tetrahydrofolate ligase complement(2415131..2416792) Brachyspira murdochii DSM 12563 9143126 YP_003634400.1 CDS Bmur_2126 NC_014150.1 2417030 2417992 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bhy:BHWA1_02386 Gfo/Idh/MocA family oxidoreductase; oxidoreductase domain-containing protein 2417030..2417992 Brachyspira murdochii DSM 12563 9143127 YP_003634401.1 CDS Bmur_2127 NC_014150.1 2418112 2418885 R TIGRFAM: tryptophan synthase, alpha subunit; KEGG: ere:EUBREC_2975 tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(2418112..2418885) Brachyspira murdochii DSM 12563 9143128 YP_003634402.1 CDS Bmur_2128 NC_014150.1 2418878 2420062 R KEGG: ere:EUBREC_2976 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta complement(2418878..2420062) Brachyspira murdochii DSM 12563 9143129 YP_003634403.1 CDS Bmur_2129 NC_014150.1 2420052 2420705 R KEGG: rsd:TGRD_120 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase complement(2420052..2420705) Brachyspira murdochii DSM 12563 9143130 YP_003634404.1 CDS Bmur_2130 NC_014150.1 2420708 2421487 R KEGG: msi:Msm_1143 indole-3-glycerol-phosphate synthase; PFAM: indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase complement(2420708..2421487) Brachyspira murdochii DSM 12563 9143131 YP_003634405.1 CDS Bmur_2131 NC_014150.1 2421509 2422531 R TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: msi:Msm_1144 anthranilate phosphoribosyltransferase, TrpD; PFAM: glycosyl transferase 3; glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase complement(2421509..2422531) Brachyspira murdochii DSM 12563 9143132 YP_003634406.1 CDS Bmur_2132 NC_014150.1 2422695 2423279 R KEGG: ere:EUBREC_2979 anthranilate/para- aminobenzoate synthase component II, TrpG; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase complement(2422695..2423279) Brachyspira murdochii DSM 12563 9143133 YP_003634407.1 CDS Bmur_2133 NC_014150.1 2423279 2424733 R KEGG: msi:Msm_1146 anthranilate/para-aminobenzoate synthase component I, TrpE; PFAM: Chorismate binding-like; anthranilate synthase component I domain protein; anthranilate synthase complement(2423279..2424733) Brachyspira murdochii DSM 12563 9143134 YP_003634408.1 CDS Bmur_2134 NC_014150.1 2425115 2425981 R KEGG: bhy:BHWA1_02255 hypothetical protein; hypothetical protein complement(2425115..2425981) Brachyspira murdochii DSM 12563 9143135 YP_003634409.1 CDS Bmur_2135 NC_014150.1 2425992 2427221 R KEGG: conserved hypothetical protein; hypothetical protein complement(2425992..2427221) Brachyspira murdochii DSM 12563 9143136 YP_003634410.1 CDS Bmur_2136 NC_014150.1 2427548 2429311 R KEGG: bhy:BHWA1_00985 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD subfamily RNA polymerase sigma-70 subunit complement(2427548..2429311) Brachyspira murdochii DSM 12563 9143137 YP_003634411.1 CDS Bmur_2137 NC_014150.1 2429308 2431113 R TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; KEGG: bhy:BHWA1_00986 DNA primase; SMART: Toprim sub domain protein; zinc finger CHC2- family protein; DNA primase complement(2429308..2431113) Brachyspira murdochii DSM 12563 9143138 YP_003634412.1 CDS Bmur_2138 NC_014150.1 2431351 2432397 D KEGG: bhy:BHWA1_00987 hypothetical protein; hypothetical protein 2431351..2432397 Brachyspira murdochii DSM 12563 9143139 YP_003634413.1 CDS Bmur_2139 NC_014150.1 2432381 2432947 D PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_00988 NUDIX hydrolase; NUDIX hydrolase 2432381..2432947 Brachyspira murdochii DSM 12563 9143140 YP_003634414.1 CDS Bmur_2140 NC_014150.1 2432998 2433522 D KEGG: bhy:BHWA1_00989 LepB, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; signal peptidase I 2432998..2433522 Brachyspira murdochii DSM 12563 9143141 YP_003634415.1 CDS Bmur_2141 NC_014150.1 2433578 2433907 R PFAM: branched-chain amino acid transport; KEGG: bhy:BHWA1_00990 branched-chain amino acid transport; branched-chain amino acid transport complement(2433578..2433907) Brachyspira murdochii DSM 12563 9143142 YP_003634416.1 CDS Bmur_2142 NC_014150.1 2433904 2434614 R PFAM: AzlC family protein; KEGG: bhy:BHWA1_00991 branched-chain amino acid transport; AzlC family protein complement(2433904..2434614) Brachyspira murdochii DSM 12563 9143143 YP_003634417.1 CDS Bmur_2143 NC_014150.1 2434695 2435432 R PFAM: CutC family protein; KEGG: bhy:BHWA1_00992 CutC family protein copper transport; CutC family protein complement(2434695..2435432) Brachyspira murdochii DSM 12563 9143144 YP_003634418.1 CDS Bmur_2144 NC_014150.1 2435545 2436636 D KEGG: bhy:BHWA1_00993 hypothetical protein; hypothetical protein 2435545..2436636 Brachyspira murdochii DSM 12563 9143145 YP_003634419.1 CDS Bmur_2145 NC_014150.1 2436707 2437564 D KEGG: bhy:BHWA1_00106 hypothetical protein; hypothetical protein 2436707..2437564 Brachyspira murdochii DSM 12563 9143146 YP_003634420.1 CDS Bmur_2146 NC_014150.1 2438200 2438682 R manually curated; manually curated; KEGG: bhy:BHWA1_00995 glutathione peroxidase; Contains selenocysteine; PFAM: glutathione peroxidase; Contains selenocysteine; peroxiredoxin complement(2438200..2438682) Brachyspira murdochii DSM 12563 9143147 YP_003634421.1 CDS Bmur_2147 NC_014150.1 2438798 2439295 R PFAM: redoxin domain protein; KEGG: bhy:BHWA1_00997 peroxiredoxin family, thiol peroxidase; redoxin domain protein complement(2438798..2439295) Brachyspira murdochii DSM 12563 9143148 YP_003634422.1 CDS Bmur_2148 NC_014150.1 2439412 2440062 R PFAM: pseudouridine synthase; KEGG: bhy:BHWA1_00998 pseudouridine synthase, RsuA/RluD family; pseudouridine synthase complement(2439412..2440062) Brachyspira murdochii DSM 12563 9143149 YP_003634423.1 CDS Bmur_2149 NC_014150.1 2440074 2441807 R PFAM: protein of unknown function DUF115; KEGG: bhy:BHWA1_00999 hypothetical protein; hypothetical protein complement(2440074..2441807) Brachyspira murdochii DSM 12563 9143150 YP_003634424.1 CDS Bmur_2150 NC_014150.1 2441939 2442364 D KEGG: bhy:BHWA1_01000 chemotaxis response regulator CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2441939..2442364 Brachyspira murdochii DSM 12563 9143151 YP_003634425.1 CDS Bmur_2151 NC_014150.1 2442491 2444995 D SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: bhy:BHWA1_01001 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 2442491..2444995 Brachyspira murdochii DSM 12563 9143152 YP_003634426.1 CDS Bmur_2152 NC_014150.1 2445263 2445613 D KEGG: bhy:BHWA1_01002 hypothetical protein; hypothetical protein 2445263..2445613 Brachyspira murdochii DSM 12563 9143153 YP_003634427.1 CDS Bmur_2153 NC_014150.1 2445616 2446290 R KEGG: bhy:BHWA1_01003 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2445616..2446290) Brachyspira murdochii DSM 12563 9143154 YP_003634428.1 CDS Bmur_2154 NC_014150.1 2446287 2446850 R PFAM: protein of unknown function DUF214; KEGG: bhy:BHWA1_01004 hypothetical protein; hypothetical protein complement(2446287..2446850) Brachyspira murdochii DSM 12563 9143155 YP_003634429.1 CDS Bmur_2155 NC_014150.1 2446975 2448063 R KEGG: bhy:BHWA1_02499 serine phosphatase RsbU, regulator of sigma subunit; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; Ser/Thr phosphatase complement(2446975..2448063) Brachyspira murdochii DSM 12563 9143156 YP_003634430.1 CDS Bmur_2156 NC_014150.1 2448240 2449136 D PFAM: dihydrodipicolinate synthetase; KEGG: cdl:CDR20291_2139 N-acetylneuraminate lyase; dihydrodipicolinate synthetase 2448240..2449136 Brachyspira murdochii DSM 12563 9143157 YP_003634431.1 CDS Bmur_2157 NC_014150.1 2449211 2449675 D PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_02500 hypothetical protein; hypothetical protein 2449211..2449675 Brachyspira murdochii DSM 12563 9143158 YP_003634432.1 CDS Bmur_2158 NC_014150.1 2450153 2451103 D KEGG: bhy:BHWA1_02501 multimeric flavodoxin WrbA fused to cytochrome c-like domain; multimeric flavodoxin WrbA fused to cytochrome c- like domain 2450153..2451103 Brachyspira murdochii DSM 12563 9143159 YP_003634433.1 CDS Bmur_2159 NC_014150.1 2451190 2452938 R TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; KEGG: bhy:BHWA1_02502 [Fe] hydrogenase, large subunit HymC; SMART: iron hydrogenase small subunit; hydrogenase, Fe-only complement(2451190..2452938) Brachyspira murdochii DSM 12563 9143160 YP_003634434.1 CDS Bmur_2160 NC_014150.1 2452968 2454656 R KEGG: bhy:BHWA1_02503 DH:ubiquinone oxidoreductase, DH-binding (51 kDa) subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) complement(2452968..2454656) Brachyspira murdochii DSM 12563 9143161 YP_003634435.1 CDS Bmur_2161 NC_014150.1 2454668 2455159 R PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bhy:BHWA1_02504 DH:ubiquinone oxidoreductase 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit complement(2454668..2455159) Brachyspira murdochii DSM 12563 9143162 YP_003634436.1 CDS Bmur_2162 NC_014150.1 2455424 2456302 R KEGG: bhy:BHWA1_02505 hypothetical protein; hypothetical protein complement(2455424..2456302) Brachyspira murdochii DSM 12563 9143163 YP_003634437.1 CDS Bmur_2163 NC_014150.1 2456355 2457461 R KEGG: bhy:BHWA1_02506 hypothetical protein; hypothetical protein complement(2456355..2457461) Brachyspira murdochii DSM 12563 9143164 YP_003634438.1 CDS Bmur_2164 NC_014150.1 2457615 2457827 R KEGG: sag:SAG2013 hypothetical protein; hypothetical protein complement(2457615..2457827) Brachyspira murdochii DSM 12563 9143165 YP_003634439.1 CDS Bmur_2166 NC_014150.1 2458233 2459570 R SMART: AAA ATPase; KEGG: bhy:BHWA1_02508 hypothetical protein; ATPase AAA complement(2458233..2459570) Brachyspira murdochii DSM 12563 9143167 YP_003634440.1 CDS Bmur_2167 NC_014150.1 2459748 2461277 D SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: bhy:BHWA1_02509 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2459748..2461277 Brachyspira murdochii DSM 12563 9143168 YP_003634441.1 CDS Bmur_2168 NC_014150.1 2461798 2462208 R KEGG: bhy:BHWA1_02510 rhodanese homology domain (RHOD) superfamily protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein complement(2461798..2462208) Brachyspira murdochii DSM 12563 9143169 YP_003634442.1 CDS Bmur_2169 NC_014150.1 2462293 2462955 R PFAM: TENA/THI-4 domain protein; KEGG: bhy:BHWA1_02511 transcription activator; TenA family transcriptional regulator complement(2462293..2462955) Brachyspira murdochii DSM 12563 9143170 YP_003634443.1 CDS Bmur_2170 NC_014150.1 2463023 2464630 R PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02512 OppA, ABC-type oligopeptide transport system, periplasmic component; ABC transporter substrate-binding protein complement(2463023..2464630) Brachyspira murdochii DSM 12563 9143171 YP_003634444.1 CDS Bmur_2171 NC_014150.1 2464952 2465923 R KEGG: bhy:BHWA1_01695 hypothetical protein; hypothetical protein complement(2464952..2465923) Brachyspira murdochii DSM 12563 9143172 YP_003634445.1 CDS Bmur_2172 NC_014150.1 2466186 2467661 D PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: bhy:BHWA1_02519 alginate O-acetylation protein; membrane bound O-acyl transferase MBOAT family protein 2466186..2467661 Brachyspira murdochii DSM 12563 9143173 YP_003634446.1 CDS Bmur_2173 NC_014150.1 2467676 2469100 D KEGG: bhy:BHWA1_02522 hypothetical protein; hypothetical protein 2467676..2469100 Brachyspira murdochii DSM 12563 9143174 YP_003634447.1 CDS Bmur_2174 NC_014150.1 2469193 2470890 R KEGG: mmo:MMOB5130 hypothetical protein; hypothetical protein complement(2469193..2470890) Brachyspira murdochii DSM 12563 9143175 YP_003634448.1 CDS Bmur_2175 NC_014150.1 2471028 2472503 D PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: bhy:BHWA1_02519 alginate O-acetylation protein; membrane bound O-acyl transferase MBOAT family protein 2471028..2472503 Brachyspira murdochii DSM 12563 9143176 YP_003634449.1 CDS Bmur_2176 NC_014150.1 2473096 2474526 D KEGG: bhy:BHWA1_02522 hypothetical protein; hypothetical protein 2473096..2474526 Brachyspira murdochii DSM 12563 9143177 YP_003634450.1 CDS Bmur_2177 NC_014150.1 2474696 2475268 D KEGG: bhy:BHWA1_01139 hypothetical protein; hypothetical protein 2474696..2475268 Brachyspira murdochii DSM 12563 9143178 YP_003634451.1 CDS Bmur_2178 NC_014150.1 2475567 2476508 D KEGG: bhy:BHWA1_01296 hypothetical protein; hypothetical protein 2475567..2476508 Brachyspira murdochii DSM 12563 9143179 YP_003634452.1 CDS Bmur_2179 NC_014150.1 2476640 2477041 D KEGG: bhy:BHWA1_02523 hypothetical protein; hypothetical protein 2476640..2477041 Brachyspira murdochii DSM 12563 9143180 YP_003634453.1 CDS Bmur_2180 NC_014150.1 2477093 2477473 D KEGG: bhy:BHWA1_02524 hypothetical protein; hypothetical protein 2477093..2477473 Brachyspira murdochii DSM 12563 9143181 YP_003634454.1 CDS Bmur_2181 NC_014150.1 2477702 2479330 D SMART: von Willebrand factor type A; KEGG: bhy:BHWA1_01140 hypothetical protein; von Willebrand factor A 2477702..2479330 Brachyspira murdochii DSM 12563 9143182 YP_003634455.1 CDS Bmur_2182 NC_014150.1 2480670 2481470 R KEGG: bhy:BHWA1_02435 haloacid dehalogenase-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase complement(2480670..2481470) Brachyspira murdochii DSM 12563 9143183 YP_003634456.1 CDS Bmur_2183 NC_014150.1 2481558 2485316 R TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: bhy:BHWA1_02433 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase complement(2481558..2485316) Brachyspira murdochii DSM 12563 9143184 YP_003634457.1 CDS Bmur_2184 NC_014150.1 2485557 2485940 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fph:Fphi_0487 glyoxalase; bleomycin resistance protein 2485557..2485940 Brachyspira murdochii DSM 12563 9143185 YP_003634458.1 CDS Bmur_2185 NC_014150.1 2485951 2487642 D PFAM: amidohydrolase; KEGG: bhy:BHWA1_02431 metal dependent amidohydrolase; amidohydrolase 2485951..2487642 Brachyspira murdochii DSM 12563 9143186 YP_003634459.1 CDS Bmur_2186 NC_014150.1 2487724 2488506 D PFAM: protein of unknown function DUF147; KEGG: bhy:BHWA1_01167 hypothetical protein; hypothetical protein 2487724..2488506 Brachyspira murdochii DSM 12563 9143187 YP_003634460.1 CDS Bmur_2187 NC_014150.1 2488503 2489504 D PFAM: YbbR family protein; KEGG: bhy:BHWA1_01168 hypothetical protein; hypothetical protein 2488503..2489504 Brachyspira murdochii DSM 12563 9143188 YP_003634461.1 CDS Bmur_2188 NC_014150.1 2489508 2489870 D KEGG: bhy:BHWA1_01169 hypothetical protein; hypothetical protein 2489508..2489870 Brachyspira murdochii DSM 12563 9143189 YP_003634462.1 CDS Bmur_2189 NC_014150.1 2489880 2490410 D PFAM: Heptaprenyl diphosphate synthase component I; KEGG: bhy:BHWA1_01170 hypothetical protein; heptaprenyl diphosphate synthase component I 2489880..2490410 Brachyspira murdochii DSM 12563 9143190 YP_003634463.1 CDS Bmur_2190 NC_014150.1 2490415 2492163 R KEGG: bhy:BHWA1_02437 hypothetical protein; hypothetical protein complement(2490415..2492163) Brachyspira murdochii DSM 12563 9143191 YP_003634464.1 CDS Bmur_2191 NC_014150.1 2492350 2493135 D KEGG: bhy:BHWA1_02453 hypothetical protein; hypothetical protein 2492350..2493135 Brachyspira murdochii DSM 12563 9143192 YP_003634465.1 CDS Bmur_2192 NC_014150.1 2493184 2493957 D KEGG: bhy:BHWA1_02454 hypothetical protein; hypothetical protein 2493184..2493957 Brachyspira murdochii DSM 12563 9143193 YP_003634466.1 CDS Bmur_2193 NC_014150.1 2493973 2494779 D KEGG: bhy:BHWA1_02455 hypothetical protein; hypothetical protein 2493973..2494779 Brachyspira murdochii DSM 12563 9143194 YP_003634467.1 CDS Bmur_2194 NC_014150.1 2494788 2495633 D KEGG: bhy:BHWA1_02456 hypothetical protein; hypothetical protein 2494788..2495633 Brachyspira murdochii DSM 12563 9143195 YP_003634468.1 CDS Bmur_2195 NC_014150.1 2495709 2496146 R KEGG: bhy:BHWA1_02438 hypothetical protein; hypothetical protein complement(2495709..2496146) Brachyspira murdochii DSM 12563 9143196 YP_003634469.1 CDS Bmur_2196 NC_014150.1 2496374 2496811 R KEGG: bhy:BHWA1_02438 hypothetical protein; hypothetical protein complement(2496374..2496811) Brachyspira murdochii DSM 12563 9143197 YP_003634470.1 CDS Bmur_2197 NC_014150.1 2497069 2497308 D KEGG: bhy:BHWA1_02440 hypothetical protein; hypothetical protein 2497069..2497308 Brachyspira murdochii DSM 12563 9143198 YP_003634471.1 CDS Bmur_2198 NC_014150.1 2497345 2497818 R KEGG: bhy:BHWA1_02441 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin complement(2497345..2497818) Brachyspira murdochii DSM 12563 9143199 YP_003634472.1 CDS Bmur_2199 NC_014150.1 2497888 2499339 R KEGG: bhy:BHWA1_02442 fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region; dihydroxyacetone kinase, phosphotransfer subunit complement(2497888..2499339) Brachyspira murdochii DSM 12563 9143200 YP_003634473.1 CDS Bmur_2200 NC_014150.1 2499377 2499991 R KEGG: bhy:BHWA1_02443 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; dihydroxyacetone kinase subunit DhaL complement(2499377..2499991) Brachyspira murdochii DSM 12563 9143201 YP_003634474.1 CDS Bmur_2201 NC_014150.1 2500026 2501021 R TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: bhy:BHWA1_02444 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase; dihydroxyacetone kinase subunit DhaK complement(2500026..2501021) Brachyspira murdochii DSM 12563 9143202 YP_003634475.1 CDS Bmur_2202 NC_014150.1 2501299 2502024 D PFAM: PBS lyase HEAT domain protein repeat- containing protein; KEGG: bhy:BHWA1_02445 hypothetical protein; PBS lyase HEAT domain-containing protein repeat-containing protein 2501299..2502024 Brachyspira murdochii DSM 12563 9143203 YP_003634476.1 CDS Bmur_2203 NC_014150.1 2502428 2503438 D KEGG: bhy:BHWA1_02446 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2502428..2503438 Brachyspira murdochii DSM 12563 9143204 YP_003634477.1 CDS Bmur_2204 NC_014150.1 2503455 2504162 D KEGG: bhy:BHWA1_02447 ABC-type transport system involved in multi-copper enzyme maturation, permease component; copper ABC transporter permease 2503455..2504162 Brachyspira murdochii DSM 12563 9143205 YP_003634478.1 CDS Bmur_2205 NC_014150.1 2504196 2504771 D KEGG: bhy:BHWA1_02448 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2504196..2504771 Brachyspira murdochii DSM 12563 9143206 YP_003634479.1 CDS Bmur_2206 NC_014150.1 2505018 2506010 D TIGRFAM: ferrochelatase; KEGG: bhy:BHWA1_00920 ferrochelatase; PFAM: ferrochelatase; ferrochelatase 2505018..2506010 Brachyspira murdochii DSM 12563 9143207 YP_003634480.1 CDS Bmur_2207 NC_014150.1 2506185 2511935 D PFAM: alpha-2-macroglobulin domain protein; alpha-2- macroglobulin domain protein 2; alpha-2-macroglobulin; KEGG: bhy:BHWA1_00921 alpha-2- macroglobulin domain protein; alpha-2-macroglobulin 2506185..2511935 Brachyspira murdochii DSM 12563 9143208 YP_003634481.1 CDS Bmur_2208 NC_014150.1 2512288 2512722 D KEGG: bhy:BHWA1_01058 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2512288..2512722 Brachyspira murdochii DSM 12563 9143209 YP_003634482.1 CDS Bmur_2209 NC_014150.1 2512883 2513365 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_01054 heat shock protein; hypothetical protein 2512883..2513365 Brachyspira murdochii DSM 12563 9143210 YP_003634483.1 CDS Bmur_2210 NC_014150.1 2513552 2514142 D KEGG: bhy:BHWA1_01053 lipoprotein; lipoprotein 2513552..2514142 Brachyspira murdochii DSM 12563 9143211 YP_003634484.1 CDS Bmur_2211 NC_014150.1 2514205 2515707 D KEGG: bhy:BHWA1_01052 outer membrane protein (TmpB); PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; peptidoglycan-binding lysin domain protein 2514205..2515707 Brachyspira murdochii DSM 12563 9143212 YP_003634485.1 CDS Bmur_2212 NC_014150.1 2515789 2516364 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bhy:BHWA1_01051 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase 2515789..2516364 Brachyspira murdochii DSM 12563 9143213 YP_003634486.1 CDS Bmur_2213 NC_014150.1 2516389 2516877 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bhy:BHWA1_01050 peptidyl-prolyl cis-trans isomerase A; cyclophilin type peptidyl-prolyl cis-trans isomerase 2516389..2516877 Brachyspira murdochii DSM 12563 9143214 YP_003634487.1 CDS Bmur_2214 NC_014150.1 2516956 2518380 R PFAM: sodium/glutamate symporter; KEGG: bhy:BHWA1_01049 sodium/glutamate symporter; sodium/glutamate symporter complement(2516956..2518380) Brachyspira murdochii DSM 12563 9143215 YP_003634488.1 CDS Bmur_2215 NC_014150.1 2518414 2519220 R PFAM: protein of unknown function DUF218; KEGG: bhy:BHWA1_01048 hypothetical protein; hypothetical protein complement(2518414..2519220) Brachyspira murdochii DSM 12563 9143216 YP_003634489.1 CDS Bmur_2216 NC_014150.1 2519645 2521318 D KEGG: bhy:BHWA1_01047 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; acetolactate synthase large subunit 2519645..2521318 Brachyspira murdochii DSM 12563 9143217 YP_003634490.1 CDS Bmur_2217 NC_014150.1 2521338 2521865 D KEGG: bhy:BHWA1_01046 acetolactate synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit 2521338..2521865 Brachyspira murdochii DSM 12563 9143218 YP_003634491.1 CDS Bmur_2218 NC_014150.1 2521903 2522898 D TIGRFAM: ketol-acid reductoisomerase; KEGG: bhy:BHWA1_01045 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 2521903..2522898 Brachyspira murdochii DSM 12563 9143219 YP_003634492.1 CDS Bmur_2219 NC_014150.1 2523230 2524729 D KEGG: bhy:BHWA1_01044 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase 2523230..2524729 Brachyspira murdochii DSM 12563 9143220 YP_003634493.1 CDS Bmur_2220 NC_014150.1 2524800 2526047 D KEGG: bhy:BHWA1_01043 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit 2524800..2526047 Brachyspira murdochii DSM 12563 9143221 YP_003634494.1 CDS Bmur_2221 NC_014150.1 2526092 2526580 D KEGG: bhy:BHWA1_01042 3-isopropylmalate dehydratase; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 2526092..2526580 Brachyspira murdochii DSM 12563 9143222 YP_003634495.1 CDS Bmur_2222 NC_014150.1 2526587 2527675 D TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: bhy:BHWA1_01041 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2526587..2527675 Brachyspira murdochii DSM 12563 9143223 YP_003634496.1 CDS Bmur_2223 NC_014150.1 2527819 2528055 D KEGG: bhy:BHWA1_01040 hypothetical protein; hypothetical protein 2527819..2528055 Brachyspira murdochii DSM 12563 9143224 YP_003634497.1 CDS Bmur_2224 NC_014150.1 2528048 2528758 D PFAM: protein of unknown function DUF152; KEGG: bhy:BHWA1_01039 hypothetical protein; hypothetical protein 2528048..2528758 Brachyspira murdochii DSM 12563 9143225 YP_003634498.1 CDS Bmur_2225 NC_014150.1 2529194 2529349 D KEGG: bhy:BHWA1_02577 hypothetical protein; hypothetical protein 2529194..2529349 Brachyspira murdochii DSM 12563 9143226 YP_003634499.1 CDS Bmur_2226 NC_014150.1 2529784 2530854 D TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; KEGG: bhy:BHWA1_01163 4-hydroxy-3-methylbut-2-en-1- yl diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2529784..2530854 Brachyspira murdochii DSM 12563 9143227 YP_003634500.1 CDS Bmur_2227 NC_014150.1 2531515 2531985 D KEGG: bhy:BHWA1_02393 effector-binding domain containing protein; PFAM: transcription activator effector binding; SMART: transcription activator effector binding; transcription activator effector binding protein 2531515..2531985 Brachyspira murdochii DSM 12563 9143228 YP_003634501.1 CDS Bmur_2228 NC_014150.1 2532026 2532619 D KEGG: bhy:BHWA1_02392 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 2532026..2532619 Brachyspira murdochii DSM 12563 9143229 YP_003634502.1 CDS Bmur_2229 NC_014150.1 2533015 2533539 D KEGG: bhy:BHWA1_02391 hypothetical protein; hypothetical protein 2533015..2533539 Brachyspira murdochii DSM 12563 9143230 YP_003634503.1 CDS Bmur_2230 NC_014150.1 2533574 2535241 D PFAM: carbon starvation protein CstA; KEGG: bhy:BHWA1_02390 carbon starvation protein CstA; carbon starvation protein CstA 2533574..2535241 Brachyspira murdochii DSM 12563 9143231 YP_003634504.1 CDS Bmur_2231 NC_014150.1 2535342 2535806 D KEGG: bhy:BHWA1_02389 hypothetical protein; hypothetical protein 2535342..2535806 Brachyspira murdochii DSM 12563 9143232 YP_003634505.1 CDS Bmur_2232 NC_014150.1 2535855 2538695 D KEGG: bhy:BHWA1_02388 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 2535855..2538695 Brachyspira murdochii DSM 12563 9143233 YP_003634506.1 CDS Bmur_2233 NC_014150.1 2539198 2539521 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_01135 cupin domain containing protein; cupin complement(2539198..2539521) Brachyspira murdochii DSM 12563 9143234 YP_003634507.1 CDS Bmur_2234 NC_014150.1 2539611 2542295 R TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: bhy:BHWA1_01134 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS complement(2539611..2542295) Brachyspira murdochii DSM 12563 9143235 YP_003634508.1 CDS Bmur_2235 NC_014150.1 2542442 2543233 R KEGG: bhy:BHWA1_01130 hypothetical protein; hypothetical protein complement(2542442..2543233) Brachyspira murdochii DSM 12563 9143236 YP_003634509.1 CDS Bmur_2236 NC_014150.1 2543307 2544266 R KEGG: bhy:BHWA1_01128 ankyrin repeat-containing protein; hypothetical protein complement(2543307..2544266) Brachyspira murdochii DSM 12563 9143237 YP_003634510.1 CDS Bmur_2237 NC_014150.1 2544319 2544777 R KEGG: bhy:BHWA1_01123 hypothetical protein; hypothetical protein complement(2544319..2544777) Brachyspira murdochii DSM 12563 9143238 YP_003634511.1 CDS Bmur_2238 NC_014150.1 2544916 2546520 D PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01813 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 2544916..2546520 Brachyspira murdochii DSM 12563 9143239 YP_003634512.1 CDS Bmur_2239 NC_014150.1 2546999 2547190 D KEGG: bhy:BHWA1_00901 CCAAT-box DNA binding protein subunit B; CCAAT-box DNA binding protein subunit B 2546999..2547190 Brachyspira murdochii DSM 12563 9143240 YP_003634513.1 CDS Bmur_2240 NC_014150.1 2547308 2548924 D TIGRFAM: CTP synthase; KEGG: bhy:BHWA1_00899 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 2547308..2548924 Brachyspira murdochii DSM 12563 9143241 YP_003634514.1 CDS Bmur_2241 NC_014150.1 2549069 2549587 R TIGRFAM: deoxycytidine triphosphate deaminase; KEGG: bhy:BHWA1_01136 deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase complement(2549069..2549587) Brachyspira murdochii DSM 12563 9143242 YP_003634515.1 CDS Bmur_2242 NC_014150.1 2549699 2551030 D KEGG: bhy:BHWA1_01137 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase 2549699..2551030 Brachyspira murdochii DSM 12563 9143243 YP_003634516.1 CDS Bmur_2243 NC_014150.1 2551088 2551753 R KEGG: bhy:BHWA1_01143 hypothetical protein; hypothetical protein complement(2551088..2551753) Brachyspira murdochii DSM 12563 9143244 YP_003634517.1 CDS Bmur_2244 NC_014150.1 2551780 2553900 R KEGG: bhy:BHWA1_01144 alpha-amylase 1 (1,4-alpha-D- glucan glucanohydrolase); PFAM: glycoside hydrolase 57; Domain of unknown function DUF1925; Domain of unknown function DUF1926; 4-alpha-glucanotransferase complement(2551780..2553900) Brachyspira murdochii DSM 12563 9143245 YP_003634518.1 CDS Bmur_2245 NC_014150.1 2554136 2555959 D KEGG: bhy:BHWA1_01145 glucosamine--fructose-6- phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; glucosamine/fructose-6-phosphate aminotransferase 2554136..2555959 Brachyspira murdochii DSM 12563 9143246 YP_003634519.1 CDS Bmur_2246 NC_014150.1 2557495 2558643 R PFAM: integrase; KEGG: mth:MTH893 integrase-recombinase; integrase complement(2557495..2558643) Brachyspira murdochii DSM 12563 9143247 YP_003634520.1 CDS Bmur_2247 NC_014150.1 2558824 2559582 D TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: ckr:CKR_P20 hypothetical protein; SMART: Exonuclease; DNA polymerase III subunit epsilon 2558824..2559582 Brachyspira murdochii DSM 12563 9143248 YP_003634521.1 CDS Bmur_2248 NC_014150.1 2560057 2560242 D KEGG: amsh-lp; associated molecule with the SH3 domain of STAM (AMSH) like protein; K11867 AMSH-like protease; STAM (AMSH)-SH3 domain associated-like protein 2560057..2560242 Brachyspira murdochii DSM 12563 9143249 YP_003634522.1 CDS Bmur_2249 NC_014150.1 2560475 2560699 R KEGG: ote:Oter_2697 hypothetical protein; hypothetical protein complement(2560475..2560699) Brachyspira murdochii DSM 12563 9143250 YP_003634523.1 CDS Bmur_2250 NC_014150.1 2560849 2561058 R KEGG: vvy:VV1710 small-conductance mechanosensitive channel; hypothetical protein complement(2560849..2561058) Brachyspira murdochii DSM 12563 9143251 YP_003634524.1 CDS Bmur_2251 NC_014150.1 2561074 2561565 R KEGG: hypothetical protein; hypothetical protein complement(2561074..2561565) Brachyspira murdochii DSM 12563 9143252 YP_003634525.1 CDS Bmur_2252 NC_014150.1 2561578 2562477 R KEGG: Hypothetical protein CBG04117; hypothetical protein complement(2561578..2562477) Brachyspira murdochii DSM 12563 9143253 YP_003634526.1 CDS Bmur_2253 NC_014150.1 2562558 2563097 R KEGG: wbr:WGLp481 hypothetical protein; hypothetical protein complement(2562558..2563097) Brachyspira murdochii DSM 12563 9143254 YP_003634527.1 CDS Bmur_2254 NC_014150.1 2563234 2563671 R KEGG: hypothetical protein; hypothetical protein complement(2563234..2563671) Brachyspira murdochii DSM 12563 9143255 YP_003634528.1 CDS Bmur_2255 NC_014150.1 2563676 2564269 R PFAM: glycoside hydrolase 19; KEGG: bhy:BHWA1_01853 Lys - endolysin; glycoside hydrolase; glycoside hydrolase 19 complement(2563676..2564269) Brachyspira murdochii DSM 12563 9143256 YP_003634529.1 CDS Bmur_2256 NC_014150.1 2564375 2564716 R KEGG: hypothetical protein; hypothetical protein complement(2564375..2564716) Brachyspira murdochii DSM 12563 9143257 YP_003634530.1 CDS Bmur_2257 NC_014150.1 2564790 2565179 R PFAM: Sigma-70 region 4 type 2; KEGG: bhy:BHWA1_00983 hypothetical protein; response regulator receiver protein complement(2564790..2565179) Brachyspira murdochii DSM 12563 9143258 YP_003634531.1 CDS Bmur_2259 NC_014150.1 2565387 2567351 R KEGG: bhy:BHWA1_00453 hypothetical protein; hypothetical protein complement(2565387..2567351) Brachyspira murdochii DSM 12563 9143260 YP_003634532.1 CDS Bmur_2260 NC_014150.1 2567364 2568500 R KEGG: mbo:Mb3541 PE-PGRS family protein; hypothetical protein complement(2567364..2568500) Brachyspira murdochii DSM 12563 9143261 YP_003634533.1 CDS Bmur_2261 NC_014150.1 2568606 2569061 R KEGG: hypothetical protein; hypothetical protein complement(2568606..2569061) Brachyspira murdochii DSM 12563 9143262 YP_003634534.1 CDS Bmur_2262 NC_014150.1 2569061 2569957 R KEGG: hypothetical protein; hypothetical protein complement(2569061..2569957) Brachyspira murdochii DSM 12563 9143263 YP_003634535.1 CDS Bmur_2263 NC_014150.1 2569954 2573424 R KEGG: hau:Haur_1369 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family complement(2569954..2573424) Brachyspira murdochii DSM 12563 9143264 YP_003634536.1 CDS Bmur_2264 NC_014150.1 2573514 2573702 R KEGG: hypothetical protein; hypothetical protein complement(2573514..2573702) Brachyspira murdochii DSM 12563 9143265 YP_003634537.1 CDS Bmur_2265 NC_014150.1 2573768 2574115 R KEGG: hypothetical protein; hypothetical protein complement(2573768..2574115) Brachyspira murdochii DSM 12563 9143266 YP_003634538.1 CDS Bmur_2266 NC_014150.1 2574127 2575530 R KEGG: mac:MA3808 hypothetical protein; hypothetical protein complement(2574127..2575530) Brachyspira murdochii DSM 12563 9143267 YP_003634539.1 CDS Bmur_2267 NC_014150.1 2575565 2575936 R KEGG: conserved hypothetical protein; hypothetical protein complement(2575565..2575936) Brachyspira murdochii DSM 12563 9143268 YP_003634540.1 CDS Bmur_2268 NC_014150.1 2575948 2576406 R TIGRFAM: phage protein, HK97 gp10 family; KEGG: ATP-dependent RNA helicase; phage protein, HK97 gp10 family complement(2575948..2576406) Brachyspira murdochii DSM 12563 9143269 YP_003634541.1 CDS Bmur_2269 NC_014150.1 2576408 2576761 R TIGRFAM: phage head-tail adaptor; KEGG: cby:CLM_3411 DNA polymerase I; phage head-tail adaptor complement(2576408..2576761) Brachyspira murdochii DSM 12563 9143270 YP_003634542.1 CDS Bmur_2270 NC_014150.1 2576829 2577269 R TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: rsp:RSP_6247 phage-related protein, DNA packing; DNA packaging phage protein complement(2576829..2577269) Brachyspira murdochii DSM 12563 9143271 YP_003634543.1 CDS Bmur_2271 NC_014150.1 2577294 2578577 R KEGG: lga:LGAS_1485 phage phi-C31 GP36 major capsid- like protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; phage major capsid protein, HK97 family complement(2577294..2578577) Brachyspira murdochii DSM 12563 9143272 YP_003634544.1 CDS Bmur_2272 NC_014150.1 2578597 2579259 R KEGG: efa:EF2821 prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; phage prohead protease, HK97 family complement(2578597..2579259) Brachyspira murdochii DSM 12563 9143273 YP_003634545.1 CDS Bmur_2273 NC_014150.1 2579246 2580523 R KEGG: det:DET1087 HK97 family portal protein , TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family complement(2579246..2580523) Brachyspira murdochii DSM 12563 9143274 YP_003634546.1 CDS Bmur_2274 NC_014150.1 2580653 2581051 D KEGG: pmr:PMI0923 phage terminase, small subunit; phage terminase small subunit 2580653..2581051 Brachyspira murdochii DSM 12563 9143275 YP_003634547.1 CDS Bmur_2275 NC_014150.1 2581060 2582832 D PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase; terminase 2581060..2582832 Brachyspira murdochii DSM 12563 9143276 YP_003634548.1 CDS Bmur_2276 NC_014150.1 2583342 2583548 D PFAM: Protein of unknown function DUF1778; KEGG: nmu:Nmul_B2796 mobilization protein; hypothetical protein 2583342..2583548 Brachyspira murdochii DSM 12563 9143277 YP_003634549.1 CDS Bmur_2277 NC_014150.1 2583612 2585630 D KEGG: fps:FP1554 hypothetical protein; hypothetical protein 2583612..2585630 Brachyspira murdochii DSM 12563 9143278 YP_003634550.1 CDS Bmur_2278 NC_014150.1 2585677 2587536 D KEGG: bcm:Bcenmc03_7078 hypothetical protein; hypothetical protein 2585677..2587536 Brachyspira murdochii DSM 12563 9143279 YP_003634551.1 CDS Bmur_2279 NC_014150.1 2587609 2587737 R KEGG: hut:Huta_2286 hypothetical protein; hypothetical protein complement(2587609..2587737) Brachyspira murdochii DSM 12563 9143280 YP_003634552.1 CDS Bmur_2280 NC_014150.1 2587737 2588684 R PFAM: integrase domain protein SAM domain protein; integrase; KEGG: tme:Tmel_0169 phage integrase; integrase domain-containing protein SAM domain-containing protein complement(2587737..2588684) Brachyspira murdochii DSM 12563 9143281 YP_003634553.1 CDS Bmur_2281 NC_014150.1 2588763 2589170 R KEGG: bhy:BHWA1_01032 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(2588763..2589170) Brachyspira murdochii DSM 12563 9143282 YP_003634554.1 CDS Bmur_2282 NC_014150.1 2589197 2589694 R KEGG: bpy:Bphyt_7293 hypothetical protein; hypothetical protein complement(2589197..2589694) Brachyspira murdochii DSM 12563 9143283 YP_003634555.1 CDS Bmur_2283 NC_014150.1 2589717 2589887 R KEGG: bwe:BcerKBAB4_0827 group-specific protein; group-specific protein complement(2589717..2589887) Brachyspira murdochii DSM 12563 9143284 YP_003634556.1 CDS Bmur_2284 NC_014150.1 2589884 2590114 R KEGG: conserved hypothetical protein; K12840 splicing factor 45; hypothetical protein complement(2589884..2590114) Brachyspira murdochii DSM 12563 9143285 YP_003634557.1 CDS Bmur_2285 NC_014150.1 2590118 2590318 R KEGG: predicted protein; hypothetical protein complement(2590118..2590318) Brachyspira murdochii DSM 12563 9143286 YP_003634558.1 CDS Bmur_2286 NC_014150.1 2590322 2590516 R KEGG: hypothetical protein; hypothetical protein complement(2590322..2590516) Brachyspira murdochii DSM 12563 9143287 YP_003634559.1 CDS Bmur_2287 NC_014150.1 2590547 2591266 R KEGG: rme:Rmet_6243 hypothetical protein; hypothetical protein complement(2590547..2591266) Brachyspira murdochii DSM 12563 9143288 YP_003634560.1 CDS Bmur_2288 NC_014150.1 2591263 2591652 R KEGG: hypothetical protein; hypothetical protein complement(2591263..2591652) Brachyspira murdochii DSM 12563 9143289 YP_003634561.1 CDS Bmur_2289 NC_014150.1 2591642 2592496 R KEGG: hypothetical protein; hypothetical protein complement(2591642..2592496) Brachyspira murdochii DSM 12563 9143290 YP_003634562.1 CDS Bmur_2290 NC_014150.1 2592493 2592720 R KEGG: ate:Athe_1169 chromosome segregation protein SMC; hypothetical protein complement(2592493..2592720) Brachyspira murdochii DSM 12563 9143291 YP_003634563.1 CDS Bmur_2291 NC_014150.1 2592733 2593002 R KEGG: cth:Cthe_1731 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(2592733..2593002) Brachyspira murdochii DSM 12563 9143292 YP_003634564.1 CDS Bmur_2292 NC_014150.1 2593065 2593355 R KEGG: cac:CAC1607 hypothetical protein; hypothetical protein complement(2593065..2593355) Brachyspira murdochii DSM 12563 9143293 YP_003634565.1 CDS Bmur_2293 NC_014150.1 2593541 2594392 R SMART: AAA ATPase; KEGG: pml:ATP_00193 chromosomal replication initiator protein; ATPase AAA complement(2593541..2594392) Brachyspira murdochii DSM 12563 9143294 YP_003634566.1 CDS Bmur_2294 NC_014150.1 2594358 2595248 R KEGG: hypothetical protein; hypothetical protein complement(2594358..2595248) Brachyspira murdochii DSM 12563 9143295 YP_003634567.1 CDS Bmur_2295 NC_014150.1 2595784 2597784 D PFAM: UvrD/REP helicase; KEGG: bhy:BHWA1_01161 ATP-dependent DNA helicase; UvrD/REP helicase 2595784..2597784 Brachyspira murdochii DSM 12563 9143296 YP_003634568.1 CDS Bmur_2296 NC_014150.1 2598341 2598481 D hypothetical protein 2598341..2598481 Brachyspira murdochii DSM 12563 9143297 YP_003634569.1 CDS Bmur_2297 NC_014150.1 2599006 2600064 D TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; transport-associated OB domain protein; KEGG: bhy:BHWA1_02372 spermidine/putrescine transport ATP-binding protein PotA; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 2599006..2600064 Brachyspira murdochii DSM 12563 9143298 YP_003634570.1 CDS Bmur_2298 NC_014150.1 2600061 2600870 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02373 spermidine/putrescine transport ATP-binding protein PotA; binding-protein-dependent transport system inner membrane protein 2600061..2600870 Brachyspira murdochii DSM 12563 9143299 YP_003634571.1 CDS Bmur_2299 NC_014150.1 2600883 2601689 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02374 spermidine/putrescine transport ATP-binding protein PotA; binding-protein-dependent transport system inner membrane protein 2600883..2601689 Brachyspira murdochii DSM 12563 9143300 YP_003634572.1 CDS Bmur_2300 NC_014150.1 2601743 2602945 D PFAM: extracellular solute-binding protein family 1; KEGG: bhy:BHWA1_02375 spermidine/putrescine transport ATP-binding protein PotA; ABC transporter substrate-binding protein 2601743..2602945 Brachyspira murdochii DSM 12563 9143301 YP_003634573.1 CDS Bmur_2301 NC_014150.1 2603132 2603725 D PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_02346 transcriptional regulator, TetR family protein; TetR family transcriptional regulator 2603132..2603725 Brachyspira murdochii DSM 12563 9143302 YP_003634574.1 CDS Bmur_2302 NC_014150.1 2603757 2605505 D KEGG: bhy:BHWA1_02345 ABC-type transport system , ATPase and permease components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 2603757..2605505 Brachyspira murdochii DSM 12563 9143303 YP_003634575.1 CDS Bmur_2303 NC_014150.1 2605828 2607486 D KEGG: bhy:BHWA1_02344 ABC-type multidrug transport system, ATPase and permease components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 2605828..2607486 Brachyspira murdochii DSM 12563 9143304 YP_003634576.1 CDS Bmur_2304 NC_014150.1 2607572 2608951 R KEGG: bhy:BHWA1_02619 hydroxydechloroatrazine ethylaminohydrolase; PFAM: amidohydrolase; hydroxydechloroatrazine ethylaminohydrolase complement(2607572..2608951) Brachyspira murdochii DSM 12563 9143305 YP_003634577.1 CDS Bmur_2305 NC_014150.1 2609225 2609833 R KEGG: bhy:BHWA1_02385 hypothetical protein; hypothetical protein complement(2609225..2609833) Brachyspira murdochii DSM 12563 9143306 YP_003634578.1 CDS Bmur_2306 NC_014150.1 2609898 2610311 R PFAM: protein of unknown function DUF454; KEGG: bhy:BHWA1_02384 hypothetical protein; hypothetical protein complement(2609898..2610311) Brachyspira murdochii DSM 12563 9143307 YP_003634579.1 CDS Bmur_2307 NC_014150.1 2610308 2610727 R KEGG: bhy:BHWA1_02383 hypothetical protein; hypothetical protein complement(2610308..2610727) Brachyspira murdochii DSM 12563 9143308 YP_003634580.1 CDS Bmur_2308 NC_014150.1 2610828 2612147 R PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_02382 variable surface protein VspH; serpulina hyodysenteriae variable surface protein complement(2610828..2612147) Brachyspira murdochii DSM 12563 9143309 YP_003634581.1 CDS Bmur_2309 NC_014150.1 2612255 2612935 R KEGG: bhy:BHWA1_02381 hypothetical protein; hypothetical protein complement(2612255..2612935) Brachyspira murdochii DSM 12563 9143310 YP_003634582.1 CDS Bmur_2310 NC_014150.1 2613025 2613657 R KEGG: bhy:BHWA1_01714 hypothetical protein; hypothetical protein complement(2613025..2613657) Brachyspira murdochii DSM 12563 9143311 YP_003634583.1 CDS Bmur_2311 NC_014150.1 2613869 2615269 D KEGG: bhy:BHWA1_02380 glycine/serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 2613869..2615269 Brachyspira murdochii DSM 12563 9143312 YP_003634584.1 CDS Bmur_2312 NC_014150.1 2615353 2616012 R KEGG: bhy:BHWA1_02379 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(2615353..2616012) Brachyspira murdochii DSM 12563 9143313 YP_003634585.1 CDS Bmur_2313 NC_014150.1 2616192 2616953 D KEGG: bhy:BHWA1_02378 glucosamine-6-phosphate deaminase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase 2616192..2616953 Brachyspira murdochii DSM 12563 9143314 YP_003634586.1 CDS Bmur_2314 NC_014150.1 2617072 2618229 D TIGRFAM: phosphopentomutase; KEGG: bhy:BHWA1_02377 phosphopentomutase; PFAM: phosphopentomutase domain protein; metalloenzyme domain protein; phosphopentomutase 2617072..2618229 Brachyspira murdochii DSM 12563 9143315 YP_003634587.1 CDS Bmur_2315 NC_014150.1 2619047 2620591 D KEGG: bhy:BHWA1_02581 bifunctional GMP synthase/glutamine amidotransferase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; tRNA methyl transferase-like; glutamine amidotransferase class-I; GMP synthase 2619047..2620591 Brachyspira murdochii DSM 12563 9143316 YP_003634588.1 CDS Bmur_2316 NC_014150.1 2620722 2621540 D KEGG: bhy:BHWA1_02539 hypothetical protein; hypothetical protein 2620722..2621540 Brachyspira murdochii DSM 12563 9143317 YP_003634589.1 CDS Bmur_2317 NC_014150.1 2621817 2622380 R KEGG: bhy:BHWA1_01141 PAP2 family protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein complement(2621817..2622380) Brachyspira murdochii DSM 12563 9143318 YP_003634590.1 CDS Bmur_2318 NC_014150.1 2622516 2623169 D PFAM: ankyrin; KEGG: NACHT and ankyrin domain protein; ankyrin 2622516..2623169 Brachyspira murdochii DSM 12563 9143319 YP_003634591.1 CDS Bmur_2319 NC_014150.1 2623245 2624258 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bhy:BHWA1_02525 FMN-dependent alpha- hydroxyacid oxidizing enzyme; FMN-dependent alpha-hydroxy acid dehydrogenase complement(2623245..2624258) Brachyspira murdochii DSM 12563 9143320 YP_003634592.1 CDS Bmur_2320 NC_014150.1 2624435 2626288 D KEGG: bhy:BHWA1_02527 hypothetical protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 2624435..2626288 Brachyspira murdochii DSM 12563 9143321 YP_003634593.1 CDS Bmur_2321 NC_014150.1 2626326 2628578 D KEGG: bhy:BHWA1_02528 TPR domain- containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein; hypothetical protein 2626326..2628578 Brachyspira murdochii DSM 12563 9143322 YP_003634594.1 CDS Bmur_2322 NC_014150.1 2628740 2629798 D KEGG: bhy:BHWA1_02529 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 2628740..2629798 Brachyspira murdochii DSM 12563 9143323 YP_003634595.1 CDS Bmur_2324 NC_014150.1 2630876 2631034 R KEGG: bhy:BHWA1_02549 hypothetical protein; hypothetical protein complement(2630876..2631034) Brachyspira murdochii DSM 12563 9143325 YP_003634596.1 CDS Bmur_2325 NC_014150.1 2631046 2632068 R PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_02550 beta-methylgalactoside transporter inner membrane component; inner-membrane translocator complement(2631046..2632068) Brachyspira murdochii DSM 12563 9143326 YP_003634597.1 CDS Bmur_2326 NC_014150.1 2632087 2633592 R KEGG: bhy:BHWA1_02551 galactose/methyl galaxtoside transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2632087..2633592) Brachyspira murdochii DSM 12563 9143327 YP_003634598.1 CDS Bmur_2327 NC_014150.1 2633687 2634739 R KEGG: bhy:BHWA1_02552 galactose/glucose-binding protein; galactose/glucose-binding protein complement(2633687..2634739) Brachyspira murdochii DSM 12563 9143328 YP_003634599.1 CDS Bmur_2328 NC_014150.1 2635181 2636215 R KEGG: bhy:BHWA1_02552 galactose/glucose-binding protein; galactose/glucose-binding protein complement(2635181..2636215) Brachyspira murdochii DSM 12563 9143329 YP_003634600.1 CDS Bmur_2329 NC_014150.1 2636287 2637315 R KEGG: bhy:BHWA1_02553 galactose/glucose-binding protein; galactose/glucose-binding protein complement(2636287..2637315) Brachyspira murdochii DSM 12563 9143330 YP_003634601.1 CDS Bmur_2330 NC_014150.1 2637464 2638477 R KEGG: bhy:BHWA1_02554 galactose/glucose-binding protein; galactose/glucose-binding protein complement(2637464..2638477) Brachyspira murdochii DSM 12563 9143331 YP_003634602.1 CDS Bmur_2331 NC_014150.1 2638563 2640491 R KEGG: dol:Dole_1466 hypothetical protein; hypothetical protein complement(2638563..2640491) Brachyspira murdochii DSM 12563 9143332 YP_003634603.1 CDS Bmur_2332 NC_014150.1 2640599 2640889 R KEGG: bhy:BHWA1_01650 hypothetical protein; hypothetical protein complement(2640599..2640889) Brachyspira murdochii DSM 12563 9143333 YP_003634604.1 CDS Bmur_2333 NC_014150.1 2641030 2642091 D TIGRFAM: 3-dehydroquinate synthase; KEGG: bhy:BHWA1_02555 3-dehydroquinate synthetase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 2641030..2642091 Brachyspira murdochii DSM 12563 9143334 YP_003634605.1 CDS Bmur_2334 NC_014150.1 2642278 2642949 D KEGG: bhy:BHWA1_00734 ankyrin repeat- containing protein; hypothetical protein 2642278..2642949 Brachyspira murdochii DSM 12563 9143335 YP_003634606.1 CDS Bmur_2335 NC_014150.1 2643019 2643450 R KEGG: bhy:BHWA1_02556 flavodoxin; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin complement(2643019..2643450) Brachyspira murdochii DSM 12563 9143336 YP_003634607.1 CDS Bmur_2336 NC_014150.1 2643490 2644056 R KEGG: bhy:BHWA1_02557 hypothetical protein; hypothetical protein complement(2643490..2644056) Brachyspira murdochii DSM 12563 9143337 YP_003634608.1 CDS Bmur_2337 NC_014150.1 2644181 2645104 R PFAM: auxin efflux carrier; KEGG: hor:Hore_22310 auxin efflux carrier; auxin efflux carrier complement(2644181..2645104) Brachyspira murdochii DSM 12563 9143338 YP_003634609.1 CDS Bmur_2338 NC_014150.1 2645331 2647247 D KEGG: bhy:BHWA1_02558 heat shock protein HSP90; PFAM: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like; SMART: ATP-binding region ATPase domain protein; ATP-binding region ATPase domain-containing protein 2645331..2647247 Brachyspira murdochii DSM 12563 9143339 YP_003634610.1 CDS Bmur_2339 NC_014150.1 2647554 2648231 R KEGG: bhy:BHWA1_00619 hypothetical protein; hypothetical protein complement(2647554..2648231) Brachyspira murdochii DSM 12563 9143340 YP_003634611.1 CDS Bmur_2340 NC_014150.1 2648255 2648680 R KEGG: bhy:BHWA1_02559 hypothetical protein; hypothetical protein complement(2648255..2648680) Brachyspira murdochii DSM 12563 9143341 YP_003634612.1 CDS Bmur_2341 NC_014150.1 2648839 2649072 R KEGG: bre:BRE_355 hypothetical protein; hypothetical protein complement(2648839..2649072) Brachyspira murdochii DSM 12563 9143342 YP_003634613.1 CDS Bmur_2342 NC_014150.1 2649641 2650663 D KEGG: bhy:BHWA1_02561 hypothetical protein; hypothetical protein 2649641..2650663 Brachyspira murdochii DSM 12563 9143343 YP_003634614.1 CDS Bmur_2343 NC_014150.1 2650770 2651699 D KEGG: bhy:BHWA1_02562 R polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; RpoD subfamily RNA polymerase sigma-70 subunit 2650770..2651699 Brachyspira murdochii DSM 12563 9143344 YP_003634615.1 CDS Bmur_2344 NC_014150.1 2651799 2652671 D KEGG: bhy:BHWA1_02563 hypothetical protein; hypothetical protein 2651799..2652671 Brachyspira murdochii DSM 12563 9143345 YP_003634616.1 CDS Bmur_2345 NC_014150.1 2653016 2653855 D TIGRFAM: diaminopimelate epimerase; KEGG: bhy:BHWA1_00918 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 2653016..2653855 Brachyspira murdochii DSM 12563 9143346 YP_003634617.1 CDS Bmur_2346 NC_014150.1 2653999 2654559 D PFAM: lytic transglycosylase catalytic; KEGG: bhy:BHWA1_00917 LT GEWL, lytic transglycosylase (LT); lytic transglycosylase 2653999..2654559 Brachyspira murdochii DSM 12563 9143347 YP_003634618.1 CDS Bmur_2347 NC_014150.1 2654607 2655401 R KEGG: bhy:BHWA1_00916 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgG complement(2654607..2655401) Brachyspira murdochii DSM 12563 9143348 YP_003634619.1 CDS Bmur_2348 NC_014150.1 2655584 2656969 D KEGG: gyc:GYMC61_3383 hypothetical protein; hypothetical protein 2655584..2656969 Brachyspira murdochii DSM 12563 9143349 YP_003634620.1 CDS Bmur_2349 NC_014150.1 2656969 2657574 D KEGG: pml:ATP_00169 hypothetical protein; hypothetical protein 2656969..2657574 Brachyspira murdochii DSM 12563 9143350 YP_003634621.1 CDS Bmur_2350 NC_014150.1 2657704 2658354 D KEGG: bhy:BHWA1_01181 HisM, ABC-type amino acid transport system, permease component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2657704..2658354 Brachyspira murdochii DSM 12563 9143351 YP_003634622.1 CDS Bmur_2351 NC_014150.1 2658338 2659120 D KEGG: bhy:BHWA1_01180 GlnQ, ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2658338..2659120 Brachyspira murdochii DSM 12563 9143352 YP_003634623.1 CDS Bmur_2352 NC_014150.1 2659387 2660214 D KEGG: bhy:BHWA1_01179 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 2659387..2660214 Brachyspira murdochii DSM 12563 9143353 YP_003634624.1 CDS Bmur_2353 NC_014150.1 2660258 2661118 D KEGG: bhy:BHWA1_01178 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 2660258..2661118 Brachyspira murdochii DSM 12563 9143354 YP_003634625.1 CDS Bmur_2354 NC_014150.1 2661183 2662043 R PFAM: leucine-rich repeat protein; KEGG: bhy:BHWA1_01177 leucine-rich repeat containing protein; leucine-rich repeat protein complement(2661183..2662043) Brachyspira murdochii DSM 12563 9143355 YP_003634626.1 CDS Bmur_2355 NC_014150.1 2662132 2662872 R TIGRFAM: 3-dehydroquinate dehydratase, type I; KEGG: bhy:BHWA1_01176 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I; 3-dehydroquinate dehydratase complement(2662132..2662872) Brachyspira murdochii DSM 12563 9143356 YP_003634627.1 CDS Bmur_2356 NC_014150.1 2662907 2663758 R KEGG: bhy:BHWA1_01175 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; shikimate 5-dehydrogenase complement(2662907..2663758) Brachyspira murdochii DSM 12563 9143357 YP_003634628.1 CDS Bmur_2357 NC_014150.1 2663950 2664333 D KEGG: bhy:BHWA1_01174 endoribonuclease; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 2663950..2664333 Brachyspira murdochii DSM 12563 9143358 YP_003634629.1 CDS Bmur_2358 NC_014150.1 2664786 2665646 D PFAM: protein of unknown function DUF368; KEGG: bhy:BHWA1_01173 hypothetical protein; hypothetical protein 2664786..2665646 Brachyspira murdochii DSM 12563 9143359 YP_003634630.1 CDS Bmur_2359 NC_014150.1 2665847 2666851 D KEGG: bhy:BHWA1_01172 hypothetical protein; hypothetical protein 2665847..2666851 Brachyspira murdochii DSM 12563 9143360 YP_003634631.1 CDS Bmur_2360 NC_014150.1 2666869 2667909 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_01171 TPR domain-containing protein; hypothetical protein 2666869..2667909 Brachyspira murdochii DSM 12563 9143361 YP_003634632.1 CDS Bmur_2361 NC_014150.1 2668000 2668752 R KEGG: bhy:BHWA1_02458 UDP-N-acetyl-D-mannosamine transferase; UDP-N-acetyl-D-mannosamine transferase complement(2668000..2668752) Brachyspira murdochii DSM 12563 9143362 YP_003634633.1 CDS Bmur_2362 NC_014150.1 2668786 2669766 R TIGRFAM: 6-phosphofructokinase; KEGG: bhy:BHWA1_02459 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase complement(2668786..2669766) Brachyspira murdochii DSM 12563 9143363 YP_003634634.1 CDS Bmur_2363 NC_014150.1 2669894 2671258 D KEGG: bhy:BHWA1_02460 Mg/Co/Ni transporter MgtE; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; magnesium transporter 2669894..2671258 Brachyspira murdochii DSM 12563 9143364 YP_003634635.1 CDS Bmur_2364 NC_014150.1 2671410 2672540 R PFAM: protein of unknown function DUF362; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_02617 hypothetical protein; hypothetical protein complement(2671410..2672540) Brachyspira murdochii DSM 12563 9143365 YP_003634636.1 CDS Bmur_2365 NC_014150.1 2672744 2673853 R KEGG: bhy:BHWA1_01367 hypothetical protein; hypothetical protein complement(2672744..2673853) Brachyspira murdochii DSM 12563 9143366 YP_003634637.1 CDS Bmur_2366 NC_014150.1 2673892 2675142 R PFAM: Cl- channel voltage-gated family protein; KEGG: bhy:BHWA1_01088 chloride channel protein; Cl- channel voltage-gated family protein complement(2673892..2675142) Brachyspira murdochii DSM 12563 9143367 YP_003634638.1 CDS Bmur_2367 NC_014150.1 2675187 2676287 R KEGG: bhy:BHWA1_01089 translation-associated GTPase; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related; GTP-binding protein YchF complement(2675187..2676287) Brachyspira murdochii DSM 12563 9143368 YP_003634639.1 CDS Bmur_2368 NC_014150.1 2676610 2677515 D TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: bhy:BHWA1_00923 UDP-N-acetylmuramate dehydrogenase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 2676610..2677515 Brachyspira murdochii DSM 12563 9143369 YP_003634640.1 CDS Bmur_2369 NC_014150.1 2677518 2678225 R PFAM: acyl-ACP thioesterase; KEGG: bhy:BHWA1_01038 acyl-ACP thioesterase; acyl-ACP thioesterase complement(2677518..2678225) Brachyspira murdochii DSM 12563 9143370 YP_003634641.1 CDS Bmur_2370 NC_014150.1 2678304 2679581 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_00784 TPR domain-containing protein; hypothetical protein complement(2678304..2679581) Brachyspira murdochii DSM 12563 9143371 YP_003634642.1 CDS Bmur_2371 NC_014150.1 2679765 2681027 D KEGG: bhy:BHWA1_02620 hypothetical protein; hypothetical protein 2679765..2681027 Brachyspira murdochii DSM 12563 9143372 YP_003634643.1 CDS Bmur_2372 NC_014150.1 2681148 2683124 R KEGG: bhy:BHWA1_00855 hypothetical protein; hypothetical protein complement(2681148..2683124) Brachyspira murdochii DSM 12563 9143373 YP_003634644.1 CDS Bmur_2373 NC_014150.1 2683251 2684918 R KEGG: bhy:BHWA1_00854 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin complement(2683251..2684918) Brachyspira murdochii DSM 12563 9143374 YP_003634645.1 CDS Bmur_2374 NC_014150.1 2685105 2685248 R PFAM: ankyrin; KEGG: bhy:BHWA1_00591 ankyrin repeat-containing protein; ankyrin complement(2685105..2685248) Brachyspira murdochii DSM 12563 9143375 YP_003634646.1 CDS Bmur_2375 NC_014150.1 2685953 2687401 R KEGG: bhy:BHWA1_01029 glutamyl-tRNA(Gln) amidotransferase, A subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A complement(2685953..2687401) Brachyspira murdochii DSM 12563 9143376 YP_003634647.1 CDS Bmur_2376 NC_014150.1 2687579 2688481 R KEGG: bhy:BHWA1_01030 hypothetical protein; hypothetical protein complement(2687579..2688481) Brachyspira murdochii DSM 12563 9143377 YP_003634648.1 CDS Bmur_2377 NC_014150.1 2688752 2689099 D KEGG: bhy:BHWA1_01031 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 2688752..2689099 Brachyspira murdochii DSM 12563 9143378 YP_003634649.1 CDS Bmur_2378 NC_014150.1 2689116 2689541 D KEGG: bhy:BHWA1_01032 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 2689116..2689541 Brachyspira murdochii DSM 12563 9143379 YP_003634650.1 CDS Bmur_2379 NC_014150.1 2689573 2689911 D KEGG: bhy:BHWA1_01033 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 2689573..2689911 Brachyspira murdochii DSM 12563 9143380 YP_003634651.1 CDS Bmur_2380 NC_014150.1 2690132 2691082 D PFAM: aldo/keto reductase; KEGG: bfs:BF2134 aldo/keto reductase; aldo/keto reductase 2690132..2691082 Brachyspira murdochii DSM 12563 9143381 YP_003634652.1 CDS Bmur_2381 NC_014150.1 2691189 2691776 D PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3505 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase 2691189..2691776 Brachyspira murdochii DSM 12563 9143382 YP_003634653.1 CDS Bmur_2382 NC_014150.1 2691971 2693716 D KEGG: bhy:BHWA1_01034 thiol-disulfide interchange protein; PFAM: cytochrome c biogenesis protein transmembrane region; Protein-disulfide reductase 2691971..2693716 Brachyspira murdochii DSM 12563 9143383 YP_003634654.1 CDS Bmur_2383 NC_014150.1 2693836 2695416 D KEGG: bhy:BHWA1_01036 ankyrin repeat-containing protein; ankyrin repeat-containing protein 2693836..2695416 Brachyspira murdochii DSM 12563 9143384 YP_003634655.1 CDS Bmur_2384 NC_014150.1 2695473 2696417 R KEGG: bhy:BHWA1_00754 hypothetical protein; hypothetical protein complement(2695473..2696417) Brachyspira murdochii DSM 12563 9143385 YP_003634656.1 CDS Bmur_2385 NC_014150.1 2696568 2697017 R TIGRFAM: ribose 5-phosphate isomerase B; sugar- phosphate isomerase, RpiB/LacA/LacB family; KEGG: bhy:BHWA1_01037 ribose-5-phosphate isomerase B; PFAM: ribose/galactose isomerase; ribose 5-phosphate isomerase B complement(2696568..2697017) Brachyspira murdochii DSM 12563 9143386 YP_003634657.1 CDS Bmur_2387 NC_014150.1 2698223 2698582 R KEGG: bhy:BHWA1_01116 hypothetical protein; hypothetical protein complement(2698223..2698582) Brachyspira murdochii DSM 12563 9143388 YP_003634658.1 CDS Bmur_2388 NC_014150.1 2698865 2699209 R KEGG: bhy:BHWA1_01116 hypothetical protein; hypothetical protein complement(2698865..2699209) Brachyspira murdochii DSM 12563 9143389 YP_003634659.1 CDS Bmur_2389 NC_014150.1 2699223 2700203 R KEGG: bhy:BHWA1_01115 hypothetical protein; hypothetical protein complement(2699223..2700203) Brachyspira murdochii DSM 12563 9143390 YP_003634660.1 CDS Bmur_2390 NC_014150.1 2700479 2701708 D KEGG: bhy:BHWA1_01113 hypothetical protein; hypothetical protein 2700479..2701708 Brachyspira murdochii DSM 12563 9143391 YP_003634661.1 CDS Bmur_2391 NC_014150.1 2701692 2702138 D KEGG: bhy:BHWA1_01112 iojap superfamily ortholog; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 2701692..2702138 Brachyspira murdochii DSM 12563 9143392 YP_003634662.1 CDS Bmur_2392 NC_014150.1 2702160 2702900 D KEGG: bhy:BHWA1_01111 hypothetical protein; hypothetical protein 2702160..2702900 Brachyspira murdochii DSM 12563 9143393 YP_003634663.1 CDS Bmur_2393 NC_014150.1 2702966 2703988 R KEGG: hypothetical protein; hypothetical protein complement(2702966..2703988) Brachyspira murdochii DSM 12563 9143394 YP_003634664.1 CDS Bmur_2394 NC_014150.1 2704181 2704861 R KEGG: dma:DMR_30000 hypothetical protein; hypothetical protein complement(2704181..2704861) Brachyspira murdochii DSM 12563 9143395 YP_003634665.1 CDS Bmur_2395 NC_014150.1 2705004 2705387 R KEGG: ssp:SSP0585 sodium-dependent transporter; hypothetical protein complement(2705004..2705387) Brachyspira murdochii DSM 12563 9143396 YP_003634666.1 CDS Bmur_2396 NC_014150.1 2705416 2705907 R KEGG: aac:Aaci_1410 flagellar biosynthesis protein FlhA; hypothetical protein complement(2705416..2705907) Brachyspira murdochii DSM 12563 9143397 YP_003634667.1 CDS Bmur_2397 NC_014150.1 2705978 2706319 R PFAM: TM2 domain containing protein; KEGG: lic:LIC12836 hypothetical protein; TM2 domain-containing protein complement(2705978..2706319) Brachyspira murdochii DSM 12563 9143398 YP_003634668.1 CDS Bmur_2398 NC_014150.1 2707131 2708417 D TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: bhy:BHWA1_01107 recombinase A; SMART: AAA ATPase; recombinase A 2707131..2708417 Brachyspira murdochii DSM 12563 9143402 YP_003634669.1 CDS Bmur_2399 NC_014150.1 2708584 2709438 D KEGG: bhy:BHWA1_01106 hypothetical protein; hypothetical protein 2708584..2709438 Brachyspira murdochii DSM 12563 9143403 YP_003634670.1 CDS Bmur_2400 NC_014150.1 2709394 2709948 R PFAM: SCP-like extracellular; KEGG: cpy:Cphy_1940 SCP-like extracellular; hypothetical protein complement(2709394..2709948) Brachyspira murdochii DSM 12563 9143404 YP_003634671.1 CDS Bmur_2401 NC_014150.1 2710191 2710964 D PFAM: dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bhy:BHWA1_02607 dihydroorotate dehydrogenase electron transfer subunit; dihydroorotate dehydrogenase electron transfer subunit 2710191..2710964 Brachyspira murdochii DSM 12563 9143405 YP_003634672.1 CDS Bmur_2402 NC_014150.1 2710980 2711891 D KEGG: bhy:BHWA1_02606 dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain protein; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase 2710980..2711891 Brachyspira murdochii DSM 12563 9143406 YP_003634673.1 CDS Bmur_2403 NC_014150.1 2711953 2713308 D TIGRFAM: orotidine 5'-phosphate decarboxylase; orotate phosphoribosyltransferase; KEGG: bhy:BHWA1_02605 orotidine 5'- phosphate decarboxylase/orotate phosphoribosyltransferase; PFAM: Orotidine 5'-phosphate decarboxylase; phosphoribosyltransferase; orotidine 5'-phosphate decarboxylase 2711953..2713308 Brachyspira murdochii DSM 12563 9143407 YP_003634674.1 CDS Bmur_2404 NC_014150.1 2713378 2713983 R KEGG: bhy:BHWA1_02604 rhodanese homology domain (RHOD) protein; PFAM: protein of unknown function DUF156; Rhodanese domain protein; SMART: Rhodanese domain protein; hypothetical protein complement(2713378..2713983) Brachyspira murdochii DSM 12563 9143408 YP_003634675.1 CDS Bmur_2405 NC_014150.1 2714141 2715829 R KEGG: bhy:BHWA1_02603 pyridine nucleotide- disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2714141..2715829) Brachyspira murdochii DSM 12563 9143409 YP_003634676.1 CDS Bmur_2406 NC_014150.1 2716112 2716309 D KEGG: bhy:BHWA1_02602 hypothetical protein; hypothetical protein 2716112..2716309 Brachyspira murdochii DSM 12563 9143410 YP_003634677.1 CDS Bmur_2407 NC_014150.1 2716509 2716697 D KEGG: bhy:BHWA1_02601 hypothetical protein; hypothetical protein 2716509..2716697 Brachyspira murdochii DSM 12563 9143411 YP_003634678.1 CDS Bmur_2408 NC_014150.1 2716894 2717283 D KEGG: bhy:BHWA1_02599 transcriptional regulator, MerR family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 2716894..2717283 Brachyspira murdochii DSM 12563 9143412 YP_003634679.1 CDS Bmur_2409 NC_014150.1 2717550 2717756 D KEGG: bhy:BHWA1_00595 ankyrin repeat-containing protein; ankyrin repeat-containing protein 2717550..2717756 Brachyspira murdochii DSM 12563 9143413 YP_003634680.1 CDS Bmur_2410 NC_014150.1 2717763 2718017 D KEGG: bhy:BHWA1_00596 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2717763..2718017 Brachyspira murdochii DSM 12563 9143414 YP_003634681.1 CDS Bmur_2411 NC_014150.1 2718036 2718620 D KEGG: bhy:BHWA1_00591 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2718036..2718620 Brachyspira murdochii DSM 12563 9143415 YP_003634682.1 CDS Bmur_2413 NC_014150.1 2720468 2721448 D KEGG: bhy:BHWA1_00994 hypothetical protein; hypothetical protein 2720468..2721448 Brachyspira murdochii DSM 12563 9143417 YP_003634683.1 CDS Bmur_2414 NC_014150.1 2721579 2723510 D KEGG: bhy:BHWA1_00856 hypothetical protein; hypothetical protein 2721579..2723510 Brachyspira murdochii DSM 12563 9143418 YP_003634684.1 CDS Bmur_2415 NC_014150.1 2723944 2724924 R PFAM: glycosyl transferase 9; KEGG: bhy:BHWA1_02595 ADP-heptose:LPS heptosyltransferase II; glycosyl transferase complement(2723944..2724924) Brachyspira murdochii DSM 12563 9143419 YP_003634685.1 CDS Bmur_2416 NC_014150.1 2724921 2726057 R PFAM: protein of unknown function UPF0118; KEGG: bhy:BHWA1_02594 predicted hypothetical protein of unknown function; hypothetical protein complement(2724921..2726057) Brachyspira murdochii DSM 12563 9143420 YP_003634686.1 CDS Bmur_2417 NC_014150.1 2726164 2729538 D KEGG: bhy:BHWA1_02593 UvrD/REP helicase; PFAM: UvrD/REP helicase; exodeoxyribonuclease V 2726164..2729538 Brachyspira murdochii DSM 12563 9143421 YP_003634687.1 CDS Bmur_2418 NC_014150.1 2729773 2730489 D KEGG: bhy:BHWA1_02592 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 2729773..2730489 Brachyspira murdochii DSM 12563 9143422 YP_003634688.1 CDS Bmur_2419 NC_014150.1 2730486 2731766 D KEGG: bhy:BHWA1_02591 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 2730486..2731766 Brachyspira murdochii DSM 12563 9143423 YP_003634689.1 CDS Bmur_2420 NC_014150.1 2731805 2733952 D SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: bhy:BHWA1_02590 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I 2731805..2733952 Brachyspira murdochii DSM 12563 9143424 YP_003634690.1 CDS Bmur_2421 NC_014150.1 2733913 2734842 D PFAM: cell wall hydrolase/autolysin; KEGG: bhy:BHWA1_02589 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 2733913..2734842 Brachyspira murdochii DSM 12563 9143425 YP_003634691.1 CDS Bmur_2422 NC_014150.1 2734897 2736225 D KEGG: gwc:GWCH70_3230 hypothetical protein; hypothetical protein 2734897..2736225 Brachyspira murdochii DSM 12563 9143426 YP_003634692.1 CDS Bmur_2423 NC_014150.1 2736229 2736828 D KEGG: gwc:GWCH70_3229 hypothetical protein; hypothetical protein 2736229..2736828 Brachyspira murdochii DSM 12563 9143427 YP_003634693.1 CDS Bmur_2424 NC_014150.1 2736844 2737926 R KEGG: rbo:A1I_03215 capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein- like protein complement(2736844..2737926) Brachyspira murdochii DSM 12563 9143428 YP_003634694.1 CDS Bmur_2425 NC_014150.1 2738385 2739770 D KEGG: bhy:BHWA1_02479 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 2738385..2739770 Brachyspira murdochii DSM 12563 9143429 YP_003634695.1 CDS Bmur_2426 NC_014150.1 2739979 2741913 D KEGG: bhy:BHWA1_02478 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2739979..2741913 Brachyspira murdochii DSM 12563 9143430 YP_003634696.1 CDS Bmur_2427 NC_014150.1 2741926 2743878 D KEGG: bhy:BHWA1_02477 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2741926..2743878 Brachyspira murdochii DSM 12563 9143431 YP_003634697.1 CDS Bmur_2428 NC_014150.1 2743878 2744348 D PFAM: Colicin V production protein; KEGG: bhy:BHWA1_02476 hypothetical protein; colicin V production protein 2743878..2744348 Brachyspira murdochii DSM 12563 9143432 YP_003634698.1 CDS Bmur_2429 NC_014150.1 2744397 2744618 R KEGG: bhy:BHWA1_02473 hypothetical protein; hypothetical protein complement(2744397..2744618) Brachyspira murdochii DSM 12563 9143433 YP_003634699.1 CDS Bmur_2430 NC_014150.1 2744612 2745730 R KEGG: bhy:BHWA1_02474 aminotransferase class-V; PFAM: aminotransferase class V; cysteine desulfurase complement(2744612..2745730) Brachyspira murdochii DSM 12563 9143434 YP_003634700.1 CDS Bmur_2431 NC_014150.1 2745745 2746314 R KEGG: bhy:BHWA1_02475 protein of unknown function with an N-terminal SirA-like domain; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA family protein; selenium metabolism protein YedF complement(2745745..2746314) Brachyspira murdochii DSM 12563 9143435 YP_003634701.1 CDS Bmur_2432 NC_014150.1 2746404 2747210 R PFAM: ABC transporter; KEGG: bhy:BHWA1_00888 ABC-3, ABC 3 transport family protein; ABC transporter complement(2746404..2747210) Brachyspira murdochii DSM 12563 9143436 YP_003634702.1 CDS Bmur_2433 NC_014150.1 2747329 2748414 R PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_00889 variable surface protein A; serpulina hyodysenteriae variable surface protein complement(2747329..2748414) Brachyspira murdochii DSM 12563 9143437 YP_003634703.1 CDS Bmur_2434 NC_014150.1 2748531 2749271 R KEGG: bhy:BHWA1_00890 ZnuC, ABC-type Mn/Zn transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2748531..2749271) Brachyspira murdochii DSM 12563 9143438 YP_003634704.1 CDS Bmur_2435 NC_014150.1 2749303 2750208 R PFAM: periplasmic solute binding protein; KEGG: bhy:BHWA1_00891 periplasmic solute binding protein; periplasmic solute binding protein complement(2749303..2750208) Brachyspira murdochii DSM 12563 9143439 YP_003634705.1 CDS Bmur_2436 NC_014150.1 2750390 2750797 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_00892 heat shock protein; hypothetical protein 2750390..2750797 Brachyspira murdochii DSM 12563 9143440 YP_003634706.1 CDS Bmur_2437 NC_014150.1 2750814 2751224 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_00893 hypothetical protein; hypothetical protein 2750814..2751224 Brachyspira murdochii DSM 12563 9143441 YP_003634707.1 CDS Bmur_2438 NC_014150.1 2751232 2751960 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00894 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 2751232..2751960 Brachyspira murdochii DSM 12563 9143442 YP_003634708.1 CDS Bmur_2439 NC_014150.1 2751950 2752636 D KEGG: bhy:BHWA1_00895 nitrate ABC transporter, ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2751950..2752636 Brachyspira murdochii DSM 12563 9143443 YP_003634709.1 CDS Bmur_2440 NC_014150.1 2752995 2753669 R PFAM: Suppressor of fused; KEGG: cbt:CLH_2457 BtrU protein; Suppressor of fused complement(2752995..2753669) Brachyspira murdochii DSM 12563 9143444 YP_003634710.1 CDS Bmur_2441 NC_014150.1 2753814 2755877 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_00970 TPR domain-containing protein; hypothetical protein 2753814..2755877 Brachyspira murdochii DSM 12563 9143445 YP_003634711.1 CDS Bmur_2442 NC_014150.1 2755874 2758243 R KEGG: bhy:BHWA1_00969 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein complement(2755874..2758243) Brachyspira murdochii DSM 12563 9143446 YP_003634712.1 CDS Bmur_2443 NC_014150.1 2758268 2759656 R KEGG: fjo:Fjoh_2580 hypothetical protein; hypothetical protein complement(2758268..2759656) Brachyspira murdochii DSM 12563 9143447 YP_003634713.1 CDS Bmur_2444 NC_014150.1 2759689 2761509 R PFAM: protein of unknown function DUF262; KEGG: shi:Shel_19080 hypothetical protein; hypothetical protein complement(2759689..2761509) Brachyspira murdochii DSM 12563 9143448 YP_003634714.1 CDS Bmur_2445 NC_014150.1 2761532 2762785 R TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; KEGG: bhy:BHWA1_00968 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein complement(2761532..2762785) Brachyspira murdochii DSM 12563 9143449 YP_003634715.1 CDS Bmur_2446 NC_014150.1 2763062 2765056 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: bhy:BHWA1_00967 cell division protein FtsZ; SMART: Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 2763062..2765056 Brachyspira murdochii DSM 12563 9143450 YP_003634716.1 CDS Bmur_2447 NC_014150.1 2765072 2767009 D KEGG: bhy:BHWA1_00966 TPR domain-containing protein; hypothetical protein 2765072..2767009 Brachyspira murdochii DSM 12563 9143451 YP_003634717.1 CDS Bmur_2448 NC_014150.1 2767012 2767632 D TIGRFAM: dephospho-CoA kinase; KEGG: bhy:BHWA1_00965 dephospho-CoA kinase; dephospho-CoA kinase 2767012..2767632 Brachyspira murdochii DSM 12563 9143452 YP_003634718.1 CDS Bmur_2449 NC_014150.1 2767589 2768395 D PFAM: sporulation domain protein; KEGG: bhy:BHWA1_00964 sporulation related repeat protein; sporulation domain protein 2767589..2768395 Brachyspira murdochii DSM 12563 9143453 YP_003634719.1 CDS Bmur_2450 NC_014150.1 2768464 2769522 R KEGG: bhy:BHWA1_00963 thiamine biosynthesis protein; thiamine biosynthesis protein complement(2768464..2769522) Brachyspira murdochii DSM 12563 9143454 YP_003634720.1 CDS Bmur_2451 NC_014150.1 2769835 2771073 R KEGG: hypothetical protein; hypothetical protein complement(2769835..2771073) Brachyspira murdochii DSM 12563 9143455 YP_003634721.1 CDS Bmur_2452 NC_014150.1 2771475 2772017 R PFAM: protein of unknown function DUF208; KEGG: bhy:BHWA1_02598 hypothetical protein; hypothetical protein complement(2771475..2772017) Brachyspira murdochii DSM 12563 9143456 YP_003634722.1 CDS Bmur_2453 NC_014150.1 2772029 2773261 R KEGG: bhy:BHWA1_02597 hypothetical protein; hypothetical protein complement(2772029..2773261) Brachyspira murdochii DSM 12563 9143457 YP_003634723.1 CDS Bmur_2454 NC_014150.1 2773447 2774262 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_02608 4Fe-4S ferredoxin, iron- sulfur binding domain protein; 4Fe-4S ferredoxin complement(2773447..2774262) Brachyspira murdochii DSM 12563 9143458 YP_003634724.1 CDS Bmur_2455 NC_014150.1 2774484 2775500 D KEGG: bhy:BHWA1_02609 membrane protein containing von Willebrand factor (vWA) type A domain; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor A 2774484..2775500 Brachyspira murdochii DSM 12563 9143459 YP_003634725.1 CDS Bmur_2456 NC_014150.1 2775549 2776400 D KEGG: bhy:BHWA1_02610 aerotolerance- related exported protein BatC containing TPR domain; aerotolerance-related exported protein BatC containing TPR domain 2775549..2776400 Brachyspira murdochii DSM 12563 9143460 YP_003634726.1 CDS Bmur_2457 NC_014150.1 2776369 2778099 D KEGG: bhy:BHWA1_02611 hypothetical protein; hypothetical protein 2776369..2778099 Brachyspira murdochii DSM 12563 9143461 YP_003634727.1 CDS Bmur_2458 NC_014150.1 2778124 2778807 D PFAM: protein of unknown function DUF1058; KEGG: bhy:BHWA1_02612 aerotolerance-related exported protein BatE containing TPR domain; hypothetical protein 2778124..2778807 Brachyspira murdochii DSM 12563 9143462 YP_003634728.1 CDS Bmur_2459 NC_014150.1 2778834 2779892 D KEGG: bhy:BHWA1_02613 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA methyl transferase-like; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase 2778834..2779892 Brachyspira murdochii DSM 12563 9143463 YP_003634729.1 CDS Bmur_2460 NC_014150.1 2780211 2780537 D PFAM: protein of unknown function DUF74; KEGG: bhy:BHWA1_02464 hypothetical protein; hypothetical protein 2780211..2780537 Brachyspira murdochii DSM 12563 9143464 YP_003634730.1 CDS Bmur_2461 NC_014150.1 2780555 2781217 D PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_02463 predicted Rossmann fold nucleotide-binding protein; hypothetical protein 2780555..2781217 Brachyspira murdochii DSM 12563 9143465 YP_003634731.1 CDS Bmur_2462 NC_014150.1 2781220 2781807 D KEGG: bhy:BHWA1_02462 hypothetical protein; hypothetical protein 2781220..2781807 Brachyspira murdochii DSM 12563 9143466 YP_003634732.1 CDS Bmur_2463 NC_014150.1 2782041 2782976 R KEGG: bhy:BHWA1_02468 periplasmic ATP/GTP-binding protein; periplasmic ATP/GTP-binding protein complement(2782041..2782976) Brachyspira murdochii DSM 12563 9143467 YP_003634733.1 CDS Bmur_2464 NC_014150.1 2783148 2783588 D PFAM: protein of unknown function UPF0074; KEGG: bhy:BHWA1_02469 Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 2783148..2783588 Brachyspira murdochii DSM 12563 9143468 YP_003634734.1 CDS Bmur_2465 NC_014150.1 2783616 2784272 R KEGG: bhy:BHWA1_02470 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(2783616..2784272) Brachyspira murdochii DSM 12563 9143469 YP_003634735.1 CDS Bmur_2466 NC_014150.1 2784552 2786081 D KEGG: bhy:BHWA1_02471 Na+/proline symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS sodium solute transporter superfamily protein 2784552..2786081 Brachyspira murdochii DSM 12563 9143470 YP_003634736.1 CDS Bmur_2467 NC_014150.1 2786094 2787245 D KEGG: bhy:BHWA1_02472 hypothetical protein; TIGRFAM: cyclically-permuted mutatrotase; PFAM: Kelch repeat-containing protein; cyclically-permuted mutatrotase 2786094..2787245 Brachyspira murdochii DSM 12563 9143471 YP_003634737.1 CDS Bmur_2468 NC_014150.1 2787430 2788584 D PFAM: phosphoryl transfer system HPr; KEGG: bhy:BHWA1_00937 phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 2787430..2788584 Brachyspira murdochii DSM 12563 9143472 YP_003634738.1 CDS Bmur_2469 NC_014150.1 2788599 2789294 D PFAM: metallophosphoesterase; KEGG: bhy:BHWA1_00936 Metallophos, calcineurin-like phosphoesterase; metallophosphoesterase 2788599..2789294 Brachyspira murdochii DSM 12563 9143473 YP_003634739.1 CDS Bmur_2470 NC_014150.1 2789314 2789598 D KEGG: bhy:BHWA1_00935 hypothetical protein; hypothetical protein 2789314..2789598 Brachyspira murdochii DSM 12563 9143474 YP_003634740.1 CDS Bmur_2471 NC_014150.1 2789671 2790579 D PFAM: protein of unknown function DUF610 YibQ; KEGG: bhy:BHWA1_00934 divergent polysaccharide deacetylase; hypothetical protein 2789671..2790579 Brachyspira murdochii DSM 12563 9143475 YP_003634741.1 CDS Bmur_2472 NC_014150.1 2790617 2791855 D KEGG: bhy:BHWA1_00933 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 2790617..2791855 Brachyspira murdochii DSM 12563 9143476 YP_003634742.1 CDS Bmur_2473 NC_014150.1 2791985 2792446 R KEGG: bhy:BHWA1_00932 iron dependend repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; DtxR family iron (metal) dependent repressor complement(2791985..2792446) Brachyspira murdochii DSM 12563 9143477 YP_003634743.1 CDS Bmur_2474 NC_014150.1 2792649 2793332 D KEGG: bhy:BHWA1_00931 OmpR; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator, winged helix family 2792649..2793332 Brachyspira murdochii DSM 12563 9143478 YP_003634744.1 CDS Bmur_2475 NC_014150.1 2793340 2795097 D KEGG: bhy:BHWA1_00930 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; multi-sensor signal transduction histidine kinase 2793340..2795097 Brachyspira murdochii DSM 12563 9143479 YP_003634745.1 CDS Bmur_2476 NC_014150.1 2795179 2795388 D PFAM: Heavy metal transport/detoxification protein; KEGG: bhy:BHWA1_00929 CopZ, copper chaperone; heavy metal transport/detoxification protein 2795179..2795388 Brachyspira murdochii DSM 12563 9143480 YP_003634746.1 CDS Bmur_2477 NC_014150.1 2795389 2795973 D TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; KEGG: bhy:BHWA1_00928 Holliday junction DNA helicase RuvA; SMART: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote; Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA 2795389..2795973 Brachyspira murdochii DSM 12563 9143481 YP_003634747.1 CDS Bmur_2478 NC_014150.1 2796059 2796562 D PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00927 acetyltransferase; N-acetyltransferase GCN5 2796059..2796562 Brachyspira murdochii DSM 12563 9143482 YP_003634748.1 CDS Bmur_2479 NC_014150.1 2798044 2799837 D KEGG: bhy:BHWA1_01100 phosphoenolpyruvate carboxykinase (GTP); PFAM: phosphoenolpyruvate carboxykinase (GTP); phosphoenolpyruvate carboxykinase 2798044..2799837 Brachyspira murdochii DSM 12563 9143483 YP_003634749.1 CDS Bmur_2480 NC_014150.1 2800014 2801186 D KEGG: bhy:BHWA1_01098 hypothetical protein; hypothetical protein 2800014..2801186 Brachyspira murdochii DSM 12563 9143484 YP_003634750.1 CDS Bmur_2481 NC_014150.1 2801262 2802437 R KEGG: bhy:BHWA1_01096 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin complement(2801262..2802437) Brachyspira murdochii DSM 12563 9143485 YP_003634751.1 CDS Bmur_2482 NC_014150.1 2802598 2803263 D PFAM: class II aldolase/adducin family protein; KEGG: bhy:BHWA1_00758 L-fuculose phosphate aldolase; class II aldolase/adducin family protein 2802598..2803263 Brachyspira murdochii DSM 12563 9143486 YP_003634752.1 CDS Bmur_2483 NC_014150.1 2804011 2805090 D KEGG: bhy:BHWA1_02407 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl- phosphate synthase small chain; carbamoyl-phosphate synthase small subunit 2804011..2805090 Brachyspira murdochii DSM 12563 9143487 YP_003634753.1 CDS Bmur_2484 NC_014150.1 2805083 2808274 D KEGG: bhy:BHWA1_02406 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit 2805083..2808274 Brachyspira murdochii DSM 12563 9143488 YP_003634754.1 CDS Bmur_2485 NC_014150.1 2808389 2809012 D KEGG: bhy:BHWA1_00761 hypothetical protein; hypothetical protein 2808389..2809012 Brachyspira murdochii DSM 12563 9143489 YP_003634755.1 CDS Bmur_2486 NC_014150.1 2809519 2811561 D TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; Radical SAM domain protein; KEGG: bhy:BHWA1_00207 GTPase ObgE; SMART: Elongator protein 3/MiaB/NifB; GTP-binding protein Obg/CgtA 2809519..2811561 Brachyspira murdochii DSM 12563 9143490 YP_003634756.1 CDS Bmur_2487 NC_014150.1 2811607 2813226 D KEGG: bhy:BHWA1_00759 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2811607..2813226 Brachyspira murdochii DSM 12563 9143491 YP_003634757.1 CDS Bmur_2488 NC_014150.1 2813307 2813744 R PFAM: RbsD or FucU transport; KEGG: pmo:Pmob_1603 RbsD or FucU transport; transport protein RbsD/FucU complement(2813307..2813744) Brachyspira murdochii DSM 12563 9143492 YP_003634758.1 CDS Bmur_2489 NC_014150.1 2813824 2815605 R TIGRFAM: L-fucose isomerase; KEGG: hor:Hore_09570 L-fucose isomerase; PFAM: L-fucose isomerase _1 domain protein; L- fucose isomerase-like-like; L-fucose isomerase _2 domain protein; L-fucose isomerase complement(2813824..2815605) Brachyspira murdochii DSM 12563 9143493 YP_003634759.1 CDS Bmur_2490 NC_014150.1 2815641 2816663 R KEGG: cpy:Cphy_2012 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator complement(2815641..2816663) Brachyspira murdochii DSM 12563 9143494 YP_003634760.1 CDS Bmur_2491 NC_014150.1 2816692 2817909 R PFAM: inner-membrane translocator; KEGG: cpy:Cphy_2011 monosaccharide-transporting ATPase; inner-membrane translocator complement(2816692..2817909) Brachyspira murdochii DSM 12563 9143495 YP_003634761.1 CDS Bmur_2492 NC_014150.1 2817953 2819449 R KEGG: cpy:Cphy_2010 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2817953..2819449) Brachyspira murdochii DSM 12563 9143496 YP_003634762.1 CDS Bmur_2493 NC_014150.1 2819691 2821103 D PFAM: carbohydrate kinase, FGGY-like; KEGG: csc:Csac_0989 carbohydrate kinase, FGGY; FGGY-like carbohydrate kinase 2819691..2821103 Brachyspira murdochii DSM 12563 9143497 YP_003634763.1 CDS Bmur_2494 NC_014150.1 2821134 2821802 D KEGG: bhy:BHWA1_00758 L-fuculose phosphate aldolase; PFAM: class II aldolase/adducin family protein; L-fuculose phosphate aldolase 2821134..2821802 Brachyspira murdochii DSM 12563 9143498 YP_003634764.1 CDS Bmur_2495 NC_014150.1 2821876 2823024 D KEGG: bvu:BVU_1251 L-1,2-propanediol oxidoreductase; TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; lactaldehyde reductase 2821876..2823024 Brachyspira murdochii DSM 12563 9143499 YP_003634765.1 CDS Bmur_2496 NC_014150.1 2823098 2823856 R SMART: beta-lactamase domain protein; KEGG: bhy:BHWA1_00300 metal-dependent hydrolase; beta-lactamase complement(2823098..2823856) Brachyspira murdochii DSM 12563 9143500 YP_003634766.1 CDS Bmur_2498 NC_014150.1 2824598 2825143 R KEGG: bhy:BHWA1_00781 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; 2'-5' RNA ligase complement(2824598..2825143) Brachyspira murdochii DSM 12563 9143502 YP_003634767.1 CDS Bmur_2499 NC_014150.1 2825179 2825775 R KEGG: bhy:BHWA1_00780 hypothetical protein; hypothetical protein complement(2825179..2825775) Brachyspira murdochii DSM 12563 9143503 YP_003634768.1 CDS Bmur_2500 NC_014150.1 2825917 2826636 R KEGG: bhy:BHWA1_00779 hypothetical protein; hypothetical protein complement(2825917..2826636) Brachyspira murdochii DSM 12563 9143504 YP_003634769.1 CDS Bmur_2501 NC_014150.1 2826834 2827445 R KEGG: bhy:BHWA1_00778 GPR1/FUN34/YaaH family protein; GPR1/FUN34/YaaH family protein complement(2826834..2827445) Brachyspira murdochii DSM 12563 9143505 YP_003634770.1 CDS Bmur_2502 NC_014150.1 2828155 2829309 R KEGG: bhy:BHWA1_00777 SpoIIE, stage II sporulation protein E (SpoIIE); PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; response regulator receiver modulated serine phosphatase complement(2828155..2829309) Brachyspira murdochii DSM 12563 9143506 YP_003634771.1 CDS Bmur_2503 NC_014150.1 2829330 2830646 R PFAM: cell cycle protein; KEGG: bhy:BHWA1_00776 rod shape- determining protein RodA; cell cycle protein complement(2829330..2830646) Brachyspira murdochii DSM 12563 9143507 YP_003634772.1 CDS Bmur_2504 NC_014150.1 2830639 2832648 R TIGRFAM: penicillin-binding protein 2; KEGG: bhy:BHWA1_00775 transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2); PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 complement(2830639..2832648) Brachyspira murdochii DSM 12563 9143508 YP_003634773.1 CDS Bmur_2505 NC_014150.1 2832899 2833402 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cbk:CLL_A1544 flavodoxin-like fold domain protein; NAD(P)H dehydrogenase (quinone) complement(2832899..2833402) Brachyspira murdochii DSM 12563 9143509 YP_003634774.1 CDS Bmur_2506 NC_014150.1 2833447 2834106 R KEGG: bhy:BHWA1_00658 hypothetical protein; hypothetical protein complement(2833447..2834106) Brachyspira murdochii DSM 12563 9143510 YP_003634775.1 CDS Bmur_2507 NC_014150.1 2834146 2834832 R KEGG: bhy:BHWA1_00657 flavodoxin; flavodoxin complement(2834146..2834832) Brachyspira murdochii DSM 12563 9143511 YP_003634776.1 CDS Bmur_2508 NC_014150.1 2834921 2835754 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bfs:BF2136 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2834921..2835754) Brachyspira murdochii DSM 12563 9143512 YP_003634777.1 CDS Bmur_2509 NC_014150.1 2835766 2836383 R KEGG: chy:CHY_1707 hypothetical protein; hypothetical protein complement(2835766..2836383) Brachyspira murdochii DSM 12563 9143513 YP_003634778.1 CDS Bmur_2510 NC_014150.1 2836686 2837243 R KEGG: bhy:BHWA1_00656 flavodoxin; flavodoxin complement(2836686..2837243) Brachyspira murdochii DSM 12563 9143514 YP_003634779.1 CDS Bmur_2511 NC_014150.1 2837363 2838208 R PFAM: carboxymuconolactone decarboxylase; KEGG: bhy:BHWA1_00655 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(2837363..2838208) Brachyspira murdochii DSM 12563 9143515 YP_003634780.1 CDS Bmur_2512 NC_014150.1 2838228 2839073 R PFAM: aldo/keto reductase; KEGG: bhy:BHWA1_00654 aldo/keto reductase; aldo/keto reductase complement(2838228..2839073) Brachyspira murdochii DSM 12563 9143516 YP_003634781.1 CDS Bmur_2513 NC_014150.1 2839190 2839618 R KEGG: bhy:BHWA1_00653 hypothetical protein; hypothetical protein complement(2839190..2839618) Brachyspira murdochii DSM 12563 9143517 YP_003634782.1 CDS Bmur_2514 NC_014150.1 2839661 2840185 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_00278 hypothetical protein; cupin complement(2839661..2840185) Brachyspira murdochii DSM 12563 9143518 YP_003634783.1 CDS Bmur_2515 NC_014150.1 2840307 2841902 R KEGG: bhy:BHWA1_00159 hypothetical protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein complement(2840307..2841902) Brachyspira murdochii DSM 12563 9143519 YP_003634784.1 CDS Bmur_2516 NC_014150.1 2841914 2842480 R PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_00160 transcriptional regulator; TetR family transcriptional regulator complement(2841914..2842480) Brachyspira murdochii DSM 12563 9143520 YP_003634785.1 CDS Bmur_2517 NC_014150.1 2842563 2843321 R KEGG: bhy:BHWA1_00049 hypothetical protein; hypothetical protein complement(2842563..2843321) Brachyspira murdochii DSM 12563 9143521 YP_003634786.1 CDS Bmur_2518 NC_014150.1 2843396 2845969 R PFAM: glycosyl transferase 51; penicillin- binding protein transpeptidase; KEGG: bhy:BHWA1_00050 penicillin-binding protein 2; glycosyl transferase complement(2843396..2845969) Brachyspira murdochii DSM 12563 9143522 YP_003634787.1 CDS Bmur_2519 NC_014150.1 2846228 2848069 D KEGG: bhy:BHWA1_00052 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2846228..2848069 Brachyspira murdochii DSM 12563 9143523 YP_003634788.1 CDS Bmur_2520 NC_014150.1 2848478 2849224 R PFAM: glycoside hydrolase 13 domain protein; KEGG: bhy:BHWA1_02627 AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD); glycoside hydrolase 13 complement(2848478..2849224) Brachyspira murdochii DSM 12563 9143524 YP_003634789.1 CDS Bmur_2521 NC_014150.1 2849232 2849681 R KEGG: bhy:BHWA1_02626 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; flagellar protein FliS complement(2849232..2849681) Brachyspira murdochii DSM 12563 9143525 YP_003634790.1 CDS Bmur_2522 NC_014150.1 2849929 2850750 D KEGG: bhy:BHWA1_02625 aldo/keto reductase; PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 2849929..2850750 Brachyspira murdochii DSM 12563 9143526 YP_003634791.1 CDS Bmur_2523 NC_014150.1 2850890 2852326 D KEGG: bhy:BHWA1_01717 abortive infection protein; abortive infection protein 2850890..2852326 Brachyspira murdochii DSM 12563 9143527 YP_003634792.1 CDS Bmur_2524 NC_014150.1 2852327 2853040 D KEGG: hypothetical protein; hypothetical protein 2852327..2853040 Brachyspira murdochii DSM 12563 9143528 YP_003634793.1 CDS Bmur_2525 NC_014150.1 2853143 2853571 D KEGG: bhy:BHWA1_00844 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgB 2853143..2853571 Brachyspira murdochii DSM 12563 9143529 YP_003634794.1 CDS Bmur_2526 NC_014150.1 2853596 2854057 D KEGG: bhy:BHWA1_00843 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body rod protein FlgC 2853596..2854057 Brachyspira murdochii DSM 12563 9143530 YP_003634795.1 CDS Bmur_2527 NC_014150.1 2854101 2854430 D KEGG: bhy:BHWA1_00842 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 2854101..2854430 Brachyspira murdochii DSM 12563 9143531 YP_003634796.1 CDS Bmur_2528 NC_014150.1 2854467 2855243 D KEGG: bhy:BHWA1_00841 hypothetical protein; hypothetical protein 2854467..2855243 Brachyspira murdochii DSM 12563 9143532 YP_003634797.1 CDS Bmur_2529 NC_014150.1 2855426 2857039 D KEGG: bhy:BHWA1_02582 integral membrane protein MviN, virulence factor; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 2855426..2857039 Brachyspira murdochii DSM 12563 9143533 YP_003634798.1 CDS Bmur_2530 NC_014150.1 2857120 2860014 D KEGG: bhy:BHWA1_02583 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2857120..2860014 Brachyspira murdochii DSM 12563 9143534 YP_003634799.1 CDS Bmur_2531 NC_014150.1 2860146 2860532 D PFAM: Flagellar protein FlgJ-like; KEGG: bhy:BHWA1_02584 hypothetical protein; Flagellar protein FlgJ-like protein 2860146..2860532 Brachyspira murdochii DSM 12563 9143535 YP_003634800.1 CDS Bmur_2532 NC_014150.1 2860564 2861001 D KEGG: bhy:BHWA1_02585 hypothetical protein; hypothetical protein 2860564..2861001 Brachyspira murdochii DSM 12563 9143536 YP_003634801.1 CDS Bmur_2533 NC_014150.1 2861104 2862432 D PFAM: TonB-dependent receptor; KEGG: bhy:BHWA1_02586 TonB-dependent receptor; TonB-dependent receptor 2861104..2862432 Brachyspira murdochii DSM 12563 9143537 YP_003634802.1 CDS Bmur_2534 NC_014150.1 2862492 2865272 D SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix DNA- binding class 1; Helix-hairpin-helix domain protein class 2; TIGRFAM: DNA polymerase I; KEGG: bhy:BHWA1_02587 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; 5'- 3' exonuclease, N-terminal resolvase-like domain; DNA polymerase I 2862492..2865272 Brachyspira murdochii DSM 12563 9143538 YP_003634803.1 CDS Bmur_2535 NC_014150.1 2865629 2866552 R TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: bhy:BHWA1_00671 MiaA, tR delta(2)- isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2865629..2866552) Brachyspira murdochii DSM 12563 9143539 YP_003634804.1 CDS Bmur_2536 NC_014150.1 2866558 2866971 R KEGG: bhy:BHWA1_00672 hypothetical protein; hypothetical protein complement(2866558..2866971) Brachyspira murdochii DSM 12563 9143540 YP_003634805.1 CDS Bmur_2537 NC_014150.1 2866997 2867548 R SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bhy:BHWA1_00673 guanylate kinase; PFAM: guanylate kinase; guanylate kinase complement(2866997..2867548) Brachyspira murdochii DSM 12563 9143541 YP_003634806.1 CDS Bmur_2538 NC_014150.1 2867804 2869249 D KEGG: bhy:BHWA1_00674 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 2867804..2869249 Brachyspira murdochii DSM 12563 9143542 YP_003634807.1 CDS Bmur_2539 NC_014150.1 2869267 2869659 D KEGG: bhy:BHWA1_00675 REC, signal receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2869267..2869659 Brachyspira murdochii DSM 12563 9143543 YP_003634808.1 CDS Bmur_2540 NC_014150.1 2870162 2870371 R KEGG: bhy:BHWA1_00676 hypothetical protein; hypothetical protein complement(2870162..2870371) Brachyspira murdochii DSM 12563 9143544 YP_003634809.1 CDS Bmur_2541 NC_014150.1 2870395 2870841 R PFAM: SCP-like extracellular; KEGG: bhy:BHWA1_00677 SCP-like extracellular protein; hypothetical protein complement(2870395..2870841) Brachyspira murdochii DSM 12563 9143545 YP_003634810.1 CDS Bmur_2542 NC_014150.1 2870929 2871876 R KEGG: bhy:BHWA1_00678 ADP-L-glycero-D-manno-heptose- 6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; ADP-L-glycero-D-manno-heptose-6-epimerase complement(2870929..2871876) Brachyspira murdochii DSM 12563 9143546 YP_003634811.1 CDS Bmur_2543 NC_014150.1 2871899 2872357 R KEGG: bhy:BHWA1_00679 RfaE, ADP-heptose synthase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; rfaE bifunctional protein complement(2871899..2872357) Brachyspira murdochii DSM 12563 9143547 YP_003634812.1 CDS Bmur_2544 NC_014150.1 2872444 2873433 R SMART: regulatory protein LacI; KEGG: cpf:CPF_2817 LacI family transcription regulator; LacI family transcriptional regulator complement(2872444..2873433) Brachyspira murdochii DSM 12563 9143548 YP_003634813.1 CDS Bmur_2545 NC_014150.1 2873882 2874469 R KEGG: conserved hypothetical protein; hypothetical protein complement(2873882..2874469) Brachyspira murdochii DSM 12563 9143549 YP_003634814.1 CDS Bmur_2546 NC_014150.1 2874462 2875163 R KEGG: conserved hypothetical protein; hypothetical protein complement(2874462..2875163) Brachyspira murdochii DSM 12563 9143550 YP_003634815.1 CDS Bmur_2547 NC_014150.1 2875262 2878492 R KEGG: dth:DICTH_1776 type IIS restriction endonuclease; type IIS restriction endonuclease complement(2875262..2878492) Brachyspira murdochii DSM 12563 9143551 YP_003634816.1 CDS Bmur_2548 NC_014150.1 2879123 2879386 D KEGG: cbh:CLC_3167 hypothetical protein; hypothetical protein 2879123..2879386 Brachyspira murdochii DSM 12563 9143552 YP_003634817.1 CDS Bmur_2549 NC_014150.1 2879397 2880503 D PFAM: permease; KEGG: pth:PTH_0570 permease; permease 2879397..2880503 Brachyspira murdochii DSM 12563 9143553 YP_003634818.1 CDS Bmur_2550 NC_014150.1 2880497 2880949 D KEGG: cdl:CDR20291_2253 hypothetical protein; hypothetical protein 2880497..2880949 Brachyspira murdochii DSM 12563 9143554 YP_003634819.1 CDS Bmur_2551 NC_014150.1 2880985 2882151 D KEGG: pth:PTH_0572 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2880985..2882151 Brachyspira murdochii DSM 12563 9143555 YP_003634820.1 CDS Bmur_2552 NC_014150.1 2882193 2883020 D KEGG: pth:PTH_0573 hypothetical protein; hypothetical protein 2882193..2883020 Brachyspira murdochii DSM 12563 9143556 YP_003634821.1 CDS Bmur_2553 NC_014150.1 2882972 2883799 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pth:PTH_0574 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; nitrate/sulfonate/bicarbonate ABC transporter permease 2882972..2883799 Brachyspira murdochii DSM 12563 9143557 YP_003634822.1 CDS Bmur_2554 NC_014150.1 2883786 2884565 D KEGG: cby:CLM_3660 nitrate transport ATP-binding protein NrtD; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter ATP-binding protein 2883786..2884565 Brachyspira murdochii DSM 12563 9143558 YP_003634823.1 CDS Bmur_2555 NC_014150.1 2884629 2884961 D KEGG: cdl:CDR20291_2256 hypothetical protein; hypothetical protein 2884629..2884961 Brachyspira murdochii DSM 12563 9143559 YP_003634824.1 CDS Bmur_2556 NC_014150.1 2884971 2885456 D KEGG: sfu:Sfum_3948 hypothetical protein; hypothetical protein 2884971..2885456 Brachyspira murdochii DSM 12563 9143560 YP_003634825.1 CDS Bmur_2557 NC_014150.1 2885663 2889016 R KEGG: kol:Kole_1972 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; helicase domain-containing protein complement(2885663..2889016) Brachyspira murdochii DSM 12563 9143561 YP_003634826.1 CDS Bmur_2558 NC_014150.1 2889359 2890792 R KEGG: bhy:BHWA1_02622 hypothetical protein; hypothetical protein complement(2889359..2890792) Brachyspira murdochii DSM 12563 9143562 YP_003634827.1 CDS Bmur_2559 NC_014150.1 2890789 2892555 R KEGG: bhy:BHWA1_02623 phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoenolpyruvate-protein phosphotransferase complement(2890789..2892555) Brachyspira murdochii DSM 12563 9143563 YP_003634828.1 CDS Bmur_2560 NC_014150.1 2892815 2893531 R TIGRFAM: MTA/SAH nucleosidase; KEGG: bhy:BHWA1_02624 5'-methylthioadenosine; S- adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase 1; MTA/SAH nucleosidase complement(2892815..2893531) Brachyspira murdochii DSM 12563 9143564 YP_003634829.1 CDS Bmur_2561 NC_014150.1 2893743 2895371 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: apl:APL_0852 FAD flavoprotein oxidase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2893743..2895371 Brachyspira murdochii DSM 12563 9143565 YP_003634830.1 CDS Bmur_2562 NC_014150.1 2895829 2897259 D KEGG: bhy:BHWA1_01262 hypothetical protein; hypothetical protein 2895829..2897259 Brachyspira murdochii DSM 12563 9143567 YP_003634831.1 CDS Bmur_2563 NC_014150.1 2897611 2898378 R PFAM: protein of unknown function DUF81; KEGG: bhy:BHWA1_00032 transporter/membrane; hypothetical protein complement(2897611..2898378) Brachyspira murdochii DSM 12563 9143568 YP_003634832.1 CDS Bmur_2564 NC_014150.1 2898750 2899961 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bhy:BHWA1_00033 spore coat polysaccharide biosynthesis protein SpsC; DegT/DnrJ/EryC1/StrS aminotransferase 2898750..2899961 Brachyspira murdochii DSM 12563 9143569 YP_003634833.1 CDS Bmur_2565 NC_014150.1 2900007 2900948 D KEGG: bhy:BHWA1_00073 hypothetical protein; hypothetical protein 2900007..2900948 Brachyspira murdochii DSM 12563 9143570 YP_003634834.1 CDS Bmur_2566 NC_014150.1 2901385 2902344 D PFAM: glycoside hydrolase 3 domain protein; KEGG: bhy:BHWA1_00035 hypothetical protein; glycoside hydrolase 3 2901385..2902344 Brachyspira murdochii DSM 12563 9143571 YP_003634835.1 CDS Bmur_2567 NC_014150.1 2902308 2903411 D PFAM: glycoside hydrolase 3 domain protein; KEGG: bhy:BHWA1_00036 beta-hexosaminidase; glycoside hydrolase 3 2902308..2903411 Brachyspira murdochii DSM 12563 9143572 YP_003634836.1 CDS Bmur_2568 NC_014150.1 2903426 2903722 R KEGG: bhy:BHWA1_00037 hypothetical protein; hypothetical protein complement(2903426..2903722) Brachyspira murdochii DSM 12563 9143573 YP_003634837.1 CDS Bmur_2569 NC_014150.1 2904069 2904713 R PFAM: formiminotransferase-cyclodeaminase; KEGG: bhy:BHWA1_00038 formiminotransferase- cyclodeaminase; formiminotransferase-cyclodeaminase complement(2904069..2904713) Brachyspira murdochii DSM 12563 9143574 YP_003634838.1 CDS Bmur_2570 NC_014150.1 2904800 2904925 R KEGG: bhy:BHWA1_00127 hypothetical protein; hypothetical protein complement(2904800..2904925) Brachyspira murdochii DSM 12563 9143575 YP_003634839.1 CDS Bmur_2571 NC_014150.1 2905404 2906477 D TIGRFAM: methyltransferase FkbM family; KEGG: cbb:CLD_3206 FkbM family methyltransferase; FkbM family methyltransferase 2905404..2906477 Brachyspira murdochii DSM 12563 9143576 YP_003634840.1 CDS Bmur_2572 NC_014150.1 2906678 2909332 D KEGG: bhy:BHWA1_00153 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 2906678..2909332 Brachyspira murdochii DSM 12563 9143577 YP_003634841.1 CDS Bmur_2573 NC_014150.1 2909858 2910124 R KEGG: bhy:BHWA1_00152 plasmid encoded toxin Txe; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; Txe/YoeB family addiction module toxin complement(2909858..2910124) Brachyspira murdochii DSM 12563 9143578 YP_003634842.1 CDS Bmur_2574 NC_014150.1 2910117 2910383 R KEGG: bhy:BHWA1_00151 DNA-damage-inducible protein J TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; RelB/DinJ family addiction module antitoxin complement(2910117..2910383) Brachyspira murdochii DSM 12563 9143579 YP_003634843.1 CDS Bmur_2575 NC_014150.1 2910554 2911591 D PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_00889 variable surface protein A; serpulina hyodysenteriae variable surface protein 2910554..2911591 Brachyspira murdochii DSM 12563 9143580 YP_003634844.1 CDS Bmur_2576 NC_014150.1 2911769 2912602 R KEGG: bhy:BHWA1_00025 hypothetical protein; hypothetical protein complement(2911769..2912602) Brachyspira murdochii DSM 12563 9143581 YP_003634845.1 CDS Bmur_2577 NC_014150.1 2912819 2913574 D KEGG: bhy:BHWA1_00029 hypothetical protein; hypothetical protein 2912819..2913574 Brachyspira murdochii DSM 12563 9143582 YP_003634846.1 CDS Bmur_2578 NC_014150.1 2913672 2914277 D KEGG: bhy:BHWA1_00030 hypothetical protein; hypothetical protein 2913672..2914277 Brachyspira murdochii DSM 12563 9143583 YP_003634847.1 CDS Bmur_2579 NC_014150.1 2914362 2915918 D KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein 2914362..2915918 Brachyspira murdochii DSM 12563 9143584 YP_003634848.1 CDS Bmur_2580 NC_014150.1 2915924 2916757 R PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00031 glycosyltransferase; glycosyl transferase complement(2915924..2916757) Brachyspira murdochii DSM 12563 9143585 YP_003634849.1 CDS Bmur_2581 NC_014150.1 2916929 2918914 R PFAM: TonB-dependent receptor plug; KEGG: bhy:BHWA1_00392 outer membrane receptor; TonB-dependent receptor plug complement(2916929..2918914) Brachyspira murdochii DSM 12563 9143586 YP_003634850.1 CDS Bmur_2582 NC_014150.1 2918978 2919541 R KEGG: bhy:BHWA1_00393 hypothetical protein; hypothetical protein complement(2918978..2919541) Brachyspira murdochii DSM 12563 9143587 YP_003634851.1 CDS Bmur_2583 NC_014150.1 2920002 2920955 R KEGG: bhy:BHWA1_00073 hypothetical protein; hypothetical protein complement(2920002..2920955) Brachyspira murdochii DSM 12563 9143588 YP_003634852.1 CDS Bmur_2584 NC_014150.1 2921299 2922267 D PFAM: protein of unknown function DUF534; KEGG: bhy:BHWA1_00396 ABC transporter, periplasmic component; hypothetical protein 2921299..2922267 Brachyspira murdochii DSM 12563 9143589 YP_003634853.1 CDS Bmur_2585 NC_014150.1 2922316 2923224 D PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_00397 hypothetical protein; inner-membrane translocator 2922316..2923224 Brachyspira murdochii DSM 12563 9143590 YP_003634854.1 CDS Bmur_2586 NC_014150.1 2923240 2924028 D KEGG: bhy:BHWA1_00398 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2923240..2924028 Brachyspira murdochii DSM 12563 9143591 YP_003634855.1 CDS Bmur_2587 NC_014150.1 2924158 2926104 D KEGG: bhy:BHWA1_00260 hypothetical protein; hypothetical protein 2924158..2926104 Brachyspira murdochii DSM 12563 9143592 YP_003634856.1 CDS Bmur_2588 NC_014150.1 2926175 2926690 D KEGG: bhy:BHWA1_01805 hypothetical membrane protein; hypothetical protein 2926175..2926690 Brachyspira murdochii DSM 12563 9143593 YP_003634857.1 CDS Bmur_2589 NC_014150.1 2926683 2927210 D KEGG: bhy:BHWA1_01804 ComFC, predicted amidophosphoribosyltransferase; amidophosphoribosyltransferase ComFC 2926683..2927210 Brachyspira murdochii DSM 12563 9143594 YP_003634858.1 CDS Bmur_2590 NC_014150.1 2927241 2928074 D PFAM: DinB family protein; KEGG: bhy:BHWA1_01872 DinB family protein; DinB family protein 2927241..2928074 Brachyspira murdochii DSM 12563 9143595 YP_003634859.1 CDS Bmur_2591 NC_014150.1 2928791 2929696 R PFAM: phosphatidate cytidylyltransferase; KEGG: bhy:BHWA1_00196 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(2928791..2929696) Brachyspira murdochii DSM 12563 9143596 YP_003634860.1 CDS Bmur_2592 NC_014150.1 2929704 2930420 R TIGRFAM: undecaprenyl diphosphate synthase; KEGG: bhy:BHWA1_00197 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(2929704..2930420) Brachyspira murdochii DSM 12563 9143597 YP_003634861.1 CDS Bmur_2593 NC_014150.1 2930417 2930965 R KEGG: bhy:BHWA1_00198 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor complement(2930417..2930965) Brachyspira murdochii DSM 12563 9143598 YP_003634862.1 CDS Bmur_2594 NC_014150.1 2931253 2931690 D PFAM: protein of unknown function DUF523; KEGG: fma:FMG_1287 hypothetical protein; hypothetical protein 2931253..2931690 Brachyspira murdochii DSM 12563 9143599 YP_003634863.1 CDS Bmur_2595 NC_014150.1 2931729 2932706 D KEGG: bhy:BHWA1_00199 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase 2931729..2932706 Brachyspira murdochii DSM 12563 9143600 YP_003634864.1 CDS Bmur_2596 NC_014150.1 2932708 2933490 D KEGG: bhy:BHWA1_00200 ABC-type transport system, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2932708..2933490 Brachyspira murdochii DSM 12563 9143601 YP_003634865.1 CDS Bmur_2597 NC_014150.1 2933532 2934311 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_00201 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component; hypothetical protein 2933532..2934311 Brachyspira murdochii DSM 12563 9143602 YP_003634866.1 CDS Bmur_2598 NC_014150.1 2934336 2935265 D PFAM: inositol monophosphatase; KEGG: bhy:BHWA1_00202 inositol-1-monophosphatase; inositol monophosphatase 2934336..2935265 Brachyspira murdochii DSM 12563 9143603 YP_003634867.1 CDS Bmur_2599 NC_014150.1 2935325 2936737 D SMART: AAA ATPase; TIGRFAM: ATP synthase F1, beta subunit; KEGG: bhy:BHWA1_00203 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit beta 2935325..2936737 Brachyspira murdochii DSM 12563 9143604 YP_003634868.1 CDS Bmur_2600 NC_014150.1 2936817 2939672 D KEGG: bhy:BHWA1_00205 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2936817..2939672 Brachyspira murdochii DSM 12563 9143605 YP_003634869.1 CDS Bmur_2601 NC_014150.1 2939694 2940905 D PFAM: OmpA/MotB domain protein; KEGG: bhy:BHWA1_00206 outer membrane protein OmpA family; OmpA/MotB domain-containing protein 2939694..2940905 Brachyspira murdochii DSM 12563 9143606 YP_003634870.1 CDS Bmur_2602 NC_014150.1 2940955 2942172 R PFAM: amidohydrolase; KEGG: bhy:BHWA1_00045 dihydroorotase; amidohydrolase complement(2940955..2942172) Brachyspira murdochii DSM 12563 9143607 YP_003634871.1 CDS Bmur_2603 NC_014150.1 2942273 2943352 R TIGRFAM: aspartate carbamoyltransferase; KEGG: bhy:BHWA1_00046 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase complement(2942273..2943352) Brachyspira murdochii DSM 12563 9143608 YP_003634872.1 CDS Bmur_2604 NC_014150.1 2943692 2945548 D TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase domain protein; KEGG: bhy:BHWA1_00047 1-deoxy-D-xylulose-5- phosphate synthase; SMART: transketolase central region; deoxyxylulose-5-phosphate synthase 2943692..2945548 Brachyspira murdochii DSM 12563 9143609 YP_003634873.1 CDS Bmur_2605 NC_014150.1 2945543 2946676 R KEGG: bhy:BHWA1_00048 hypothetical protein; hypothetical protein complement(2945543..2946676) Brachyspira murdochii DSM 12563 9143610 YP_003634874.1 CDS Bmur_2606 NC_014150.1 2946810 2948192 R KEGG: bhy:BHWA1_00959 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA complement(2946810..2948192) Brachyspira murdochii DSM 12563 9143611 YP_003634875.1 CDS Bmur_2607 NC_014150.1 2948202 2949071 R KEGG: bhy:BHWA1_02029 hypothetical protein; hypothetical protein complement(2948202..2949071) Brachyspira murdochii DSM 12563 9143612 YP_003634876.1 CDS Bmur_2608 NC_014150.1 2949160 2951196 R PFAM: ABC-type uncharacterised transport system; KEGG: bhy:BHWA1_00958 ABC-type transport system protein involved in gliding motility auxiliary component-like protein; ABC transporter complement(2949160..2951196) Brachyspira murdochii DSM 12563 9143613 YP_003634877.1 CDS Bmur_2609 NC_014150.1 2951576 2952289 D PFAM: pseudouridine synthase; KEGG: bhy:BHWA1_00955 pseudouridine synthase; pseudouridine synthase 2951576..2952289 Brachyspira murdochii DSM 12563 9143615 YP_003634878.1 CDS Bmur_2610 NC_014150.1 2952709 2953908 D PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00946 aspartate aminotransferase; class I and II aminotransferase 2952709..2953908 Brachyspira murdochii DSM 12563 9143618 YP_003634879.1 CDS Bmur_2611 NC_014150.1 2953978 2955984 R KEGG: bhy:BHWA1_01021 hypothetical protein; hypothetical protein complement(2953978..2955984) Brachyspira murdochii DSM 12563 9143619 YP_003634880.1 CDS Bmur_2612 NC_014150.1 2956385 2957647 R KEGG: bhy:BHWA1_00945 methylthioribose kinase; TIGRFAM: 5-methylthioribose kinase; 5-methylthioribose kinase complement(2956385..2957647) Brachyspira murdochii DSM 12563 9143620 YP_003634881.1 CDS Bmur_2613 NC_014150.1 2957674 2958723 R TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: bhy:BHWA1_00944 methylthioribose-1-phosphate isomerase; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family complement(2957674..2958723) Brachyspira murdochii DSM 12563 9143621 YP_003634882.1 CDS Bmur_2614 NC_014150.1 2958796 2959746 R KEGG: cph:Cpha266_0829 radical SAM domain- containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(2958796..2959746) Brachyspira murdochii DSM 12563 9143622 YP_003634883.1 CDS Bmur_2615 NC_014150.1 2960008 2960415 R KEGG: bhy:BHWA1_01020 rhodanese-like domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein complement(2960008..2960415) Brachyspira murdochii DSM 12563 9143623 YP_003634884.1 CDS Bmur_2616 NC_014150.1 2960620 2961807 D PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00801 transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family); GntR family transcriptional regulator 2960620..2961807 Brachyspira murdochii DSM 12563 9143624 YP_003634885.1 CDS Bmur_2617 NC_014150.1 2962114 2962722 D PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: bhy:BHWA1_00800 rubrerythrin; rubrerythrin 2962114..2962722 Brachyspira murdochii DSM 12563 9143625 YP_003634886.1 CDS Bmur_2618 NC_014150.1 2962879 2963838 D TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: bhy:BHWA1_00799 signal recognition particle GTPase; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 2962879..2963838 Brachyspira murdochii DSM 12563 9143626 YP_003634887.1 CDS Bmur_2619 NC_014150.1 2963863 2965125 D KEGG: bhy:BHWA1_00798 3-phosphoshikimate 1- carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 2963863..2965125 Brachyspira murdochii DSM 12563 9143627 YP_003634888.1 CDS Bmur_2620 NC_014150.1 2965120 2966106 R PFAM: NMT1/THI5 like domain protein; KEGG: bhy:BHWA1_00797 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2965120..2966106) Brachyspira murdochii DSM 12563 9143628 YP_003634889.1 CDS Bmur_2621 NC_014150.1 2966233 2967225 R PFAM: NMT1/THI5 like domain protein; KEGG: bhy:BHWA1_00797 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2966233..2967225) Brachyspira murdochii DSM 12563 9143629 YP_003634890.1 CDS Bmur_2622 NC_014150.1 2967232 2967954 R PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00785 glycosyl transferase 2; glycosyl transferase complement(2967232..2967954) Brachyspira murdochii DSM 12563 9143630 YP_003634891.1 CDS Bmur_2623 NC_014150.1 2967951 2970662 R KEGG: bhy:BHWA1_00786 hypothetical protein; hypothetical protein complement(2967951..2970662) Brachyspira murdochii DSM 12563 9143631 YP_003634892.1 CDS Bmur_2624 NC_014150.1 2970743 2971771 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bhy:BHWA1_00787 predicted Fe-S-cluster redox enzyme; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(2970743..2971771) Brachyspira murdochii DSM 12563 9143632 YP_003634893.1 CDS Bmur_2625 NC_014150.1 2971834 2972061 R TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: bhy:BHWA1_00788 hypothetical protein; SMART: regulatory protein FmdB; FmdB family regulatory protein complement(2971834..2972061) Brachyspira murdochii DSM 12563 9143633 YP_003634894.1 CDS Bmur_2626 NC_014150.1 2972204 2973760 R KEGG: bhy:BHWA1_00789 xylulose kinase; PFAM: carbohydrate kinase, FGGY-like; xylulokinase complement(2972204..2973760) Brachyspira murdochii DSM 12563 9143634 YP_003634895.1 CDS Bmur_2627 NC_014150.1 2973817 2975541 R KEGG: bhy:BHWA1_00790 D repair and genetic recombination protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN complement(2973817..2975541) Brachyspira murdochii DSM 12563 9143635 YP_003634896.1 CDS Bmur_2628 NC_014150.1 2975541 2976410 R PFAM: ATP-NAD/AcoX kinase; KEGG: bhy:BHWA1_00791 PpnK, inorganic polyphosphate/ATP-D kinase; ATP-NAD/AcoX kinase complement(2975541..2976410) Brachyspira murdochii DSM 12563 9143636 YP_003634897.1 CDS Bmur_2629 NC_014150.1 2976520 2977257 D KEGG: bhy:BHWA1_00792 1-acyl-sn-glycerol-3- phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2976520..2977257 Brachyspira murdochii DSM 12563 9143637 YP_003634898.1 CDS Bmur_2630 NC_014150.1 2977608 2978720 R KEGG: hap:HAPS_1913 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase complement(2977608..2978720) Brachyspira murdochii DSM 12563 9143638 YP_003634899.1 CDS Bmur_2631 NC_014150.1 2979048 2980520 D KEGG: bhy:BHWA1_00793 iron only hydrogenase large subunit, C-terminal domain protein; PFAM: hydrogenase large subunit domain protein; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; ferredoxin hydrogenase 2979048..2980520 Brachyspira murdochii DSM 12563 9143639 YP_003634900.1 CDS Bmur_2632 NC_014150.1 2980605 2981237 R PFAM: ankyrin; KEGG: bhy:BHWA1_00794 ankyrin repeat-containing protein; ankyrin complement(2980605..2981237) Brachyspira murdochii DSM 12563 9143640 YP_003634901.1 CDS Bmur_2633 NC_014150.1 2981526 2982941 D KEGG: bhy:BHWA1_00795 fibronectin type III domain containing protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; fibronectin type III 2981526..2982941 Brachyspira murdochii DSM 12563 9143641 YP_003634902.1 CDS Bmur_2634 NC_014150.1 2982961 2983824 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_00796 TPR domain-containing protein; hypothetical protein 2982961..2983824 Brachyspira murdochii DSM 12563 9143642 YP_003634903.1 CDS Bmur_2635 NC_014150.1 2984145 2985971 D KEGG: bhy:BHWA1_00052 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2984145..2985971 Brachyspira murdochii DSM 12563 9143643 YP_003634904.1 CDS Bmur_2636 NC_014150.1 2986104 2986355 D KEGG: bhy:BHWA1_00053 hypothetical protein; hypothetical protein 2986104..2986355 Brachyspira murdochii DSM 12563 9143644 YP_003634905.1 CDS Bmur_2637 NC_014150.1 2986394 2987818 D KEGG: bhy:BHWA1_00054 thiamine biosynthesis protein; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB; biotin and thiamin synthesis associated protein 2986394..2987818 Brachyspira murdochii DSM 12563 9143645 YP_003634906.1 CDS Bmur_2638 NC_014150.1 2988008 2989192 D KEGG: bhy:BHWA1_00055 GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; small GTP-binding protein 2988008..2989192 Brachyspira murdochii DSM 12563 9143646 YP_003634907.1 CDS Bmur_2639 NC_014150.1 2989733 2990857 D KEGG: bhy:BHWA1_00056 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2989733..2990857 Brachyspira murdochii DSM 12563 9143647 YP_003634908.1 CDS Bmur_2640 NC_014150.1 2990925 2992679 D KEGG: bhy:BHWA1_00057 cation transport protein TrkH; PFAM: cation transporter; H(+)-transporting two-sector ATPase 2990925..2992679 Brachyspira murdochii DSM 12563 9143648 YP_003634909.1 CDS Bmur_2641 NC_014150.1 2992686 2993870 D KEGG: bhy:BHWA1_00058 MobA-related protein; MobA-related protein 2992686..2993870 Brachyspira murdochii DSM 12563 9143649 YP_003634910.1 CDS Bmur_2642 NC_014150.1 2994187 2995377 D KEGG: hhe:HH1512 hypothetical protein; hypothetical protein 2994187..2995377 Brachyspira murdochii DSM 12563 9143650 YP_003634911.1 CDS Bmur_2643 NC_014150.1 2995433 2996548 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hhe:HH1513 hypothetical protein; acyl-CoA dehydrogenase 2995433..2996548 Brachyspira murdochii DSM 12563 9143651 YP_003634912.1 CDS Bmur_2644 NC_014150.1 2996590 2997444 D KEGG: hhe:HH1514 hypothetical protein; hypothetical protein 2996590..2997444 Brachyspira murdochii DSM 12563 9143652 YP_003634913.1 CDS Bmur_2645 NC_014150.1 2997594 2998976 R KEGG: bhy:BHWA1_00059 xanthine/uracil permease; TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; uracil-xanthine permease complement(2997594..2998976) Brachyspira murdochii DSM 12563 9143653 YP_003634914.1 CDS Bmur_2646 NC_014150.1 2999020 2999871 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bhy:BHWA1_00060 aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM S; molybdopterin dehydrogenase FAD-binding protein complement(2999020..2999871) Brachyspira murdochii DSM 12563 9143654 YP_003634915.1 CDS Bmur_2647 NC_014150.1 2999862 3000350 R PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bhy:BHWA1_00061 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS S; (2Fe-2S)-binding protein complement(2999862..3000350) Brachyspira murdochii DSM 12563 9143655 YP_003634916.1 CDS Bmur_2648 NC_014150.1 3000350 3002485 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bhy:BHWA1_00062 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL S; aldehyde oxidase complement(3000350..3002485) Brachyspira murdochii DSM 12563 9143656 YP_003634917.1 CDS Bmur_2650 NC_014150.1 3003910 3004851 R TIGRFAM: carbamate kinase; KEGG: bhy:BHWA1_00063 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; carbamate kinase complement(3003910..3004851) Brachyspira murdochii DSM 12563 9143658 YP_003634918.1 CDS Bmur_2651 NC_014150.1 3004985 3006178 R KEGG: bhy:BHWA1_00064 ornithine carbamoyltransferase; TIGRFAM: carbamoyltransferase YgeW; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; carbamoyltransferase YgeW complement(3004985..3006178) Brachyspira murdochii DSM 12563 9143659 YP_003634919.1 CDS Bmur_2652 NC_014150.1 3006227 3007558 R KEGG: bhy:BHWA1_00065 acetylornithine deacetylase ArgE; TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase dimerisation domain protein; peptidase M20; M20/DapE family protein YgeY complement(3006227..3007558) Brachyspira murdochii DSM 12563 9143660 YP_003634920.1 CDS Bmur_2653 NC_014150.1 3007634 3008827 R KEGG: bhy:BHWA1_00066 diaminopropionate ammonia- lyase; TIGRFAM: diaminopropionate ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; diaminopropionate ammonia-lyase complement(3007634..3008827) Brachyspira murdochii DSM 12563 9143661 YP_003634921.1 CDS Bmur_2654 NC_014150.1 3008820 3009473 R PFAM: YheO domain protein; KEGG: bhy:BHWA1_00067 hypothetical protein containing PAS domain; hypothetical protein complement(3008820..3009473) Brachyspira murdochii DSM 12563 9143662 YP_003634922.1 CDS Bmur_2655 NC_014150.1 3009675 3011006 D KEGG: bhy:BHWA1_00068 chlorohydrolase/aminohydrolase; TIGRFAM: selenium metabolism protein SsnA; PFAM: amidohydrolase; selenium metabolism protein SsnA 3009675..3011006 Brachyspira murdochii DSM 12563 9143663 YP_003634923.1 CDS Bmur_2656 NC_014150.1 3011134 3014109 D KEGG: bhy:BHWA1_00069 oxidoreductase, Fe-S subunit; TIGRFAM: selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; selenate reductase YgfK 3011134..3014109 Brachyspira murdochii DSM 12563 9143664 YP_003634924.1 CDS Bmur_2657 NC_014150.1 3014215 3016785 D KEGG: bhy:BHWA1_00070 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL S; TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; selenium-dependent molybdenum hydroxylase 1 3014215..3016785 Brachyspira murdochii DSM 12563 9143665 YP_003634925.1 CDS Bmur_2658 NC_014150.1 3016797 3017624 D TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; KEGG: bhy:BHWA1_00071 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component; selenium-dependent molybdenum hydroxylase system protein, YqeB family 3016797..3017624 Brachyspira murdochii DSM 12563 9143666 YP_003634926.1 CDS Bmur_2659 NC_014150.1 3018053 3018601 R KEGG: bhy:BHWA1_02636 hypothetical protein; hypothetical protein complement(3018053..3018601) Brachyspira murdochii DSM 12563 9143667 YP_003634927.1 CDS Bmur_2660 NC_014150.1 3018607 3020148 R KEGG: bhy:BHWA1_02637 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; carbohydrate kinase complement(3018607..3020148) Brachyspira murdochii DSM 12563 9143668 YP_003634928.1 CDS Bmur_2661 NC_014150.1 3020145 3022004 R KEGG: bhy:BHWA1_02638 hypothetical protein; hypothetical protein complement(3020145..3022004) Brachyspira murdochii DSM 12563 9143669 YP_003634929.1 CDS Bmur_2662 NC_014150.1 3022114 3022431 R KEGG: bhy:BHWA1_02639 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(3022114..3022431) Brachyspira murdochii DSM 12563 9143670 YP_003634930.1 CDS Bmur_2663 NC_014150.1 3022611 3023027 D KEGG: bhy:BHWA1_02640 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 3022611..3023027 Brachyspira murdochii DSM 12563 9143671 YP_003634931.1 CDS Bmur_2664 NC_014150.1 3023030 3023692 D PFAM: protein of unknown function DUF161; KEGG: bhy:BHWA1_02641 hypothetical protein; hypothetical protein 3023030..3023692 Brachyspira murdochii DSM 12563 9143672 YP_003634932.1 CDS Bmur_2665 NC_014150.1 3023905 3025158 R KEGG: bhy:BHWA1_02642 3-oxoacyl-ACP (acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; 3-oxoacyl-ACP synthase complement(3023905..3025158) Brachyspira murdochii DSM 12563 9143673 YP_003634933.1 CDS Bmur_2666 NC_014150.1 3025251 3025487 R KEGG: bhy:BHWA1_02643 acyl carrier protein (ACP) contains: beta-hemolysin; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; acyl carrier protein complement(3025251..3025487) Brachyspira murdochii DSM 12563 9143674 YP_003634934.1 CDS Bmur_2667 NC_014150.1 3025568 3026317 R KEGG: bhy:BHWA1_02644 3-oxoacyl-ACP (acyl carrier protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(3025568..3026317) Brachyspira murdochii DSM 12563 9143675 YP_003634935.1 CDS Bmur_2668 NC_014150.1 3026564 3028000 R KEGG: bhy:BHWA1_02645 phosphomannomutase/phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase complement(3026564..3028000) Brachyspira murdochii DSM 12563 9143676 YP_003634936.1 CDS Bmur_2669 NC_014150.1 3028134 3029318 R PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_02646 cAMP-binding protein; Crp/Fnr family transcriptional regulator complement(3028134..3029318) Brachyspira murdochii DSM 12563 9143677 YP_003634937.1 CDS Bmur_2670 NC_014150.1 3029390 3029968 R KEGG: bhy:BHWA1_02647 3-methyl-adenine D glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(3029390..3029968) Brachyspira murdochii DSM 12563 9143678 YP_003634938.1 CDS Bmur_2671 NC_014150.1 3029995 3030489 R KEGG: bhy:BHWA1_02648 hypothetical protein; hypothetical protein complement(3029995..3030489) Brachyspira murdochii DSM 12563 9143679 YP_003634939.1 CDS Bmur_2672 NC_014150.1 3030506 3031393 R KEGG: bhy:BHWA1_02649 RNA polymerase sigma subunit RpoD; RNA polymerase sigma subunit RpoD complement(3030506..3031393) Brachyspira murdochii DSM 12563 9143680 YP_003634940.1 CDS Bmur_2673 NC_014150.1 3031386 3031841 R PFAM: protein of unknown function DUF721; KEGG: bhy:BHWA1_02650 hypothetical protein; hypothetical protein complement(3031386..3031841) Brachyspira murdochii DSM 12563 9143681 YP_003634941.1 CDS Bmur_2674 NC_014150.1 3031892 3032842 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_02651 TPR domain protein; hypothetical protein complement(3031892..3032842) Brachyspira murdochii DSM 12563 9143682 YP_003634942.1 CDS Bmur_2675 NC_014150.1 3032832 3033674 R KEGG: bhy:BHWA1_02653 hypothetical protein; hypothetical protein complement(3032832..3033674) Brachyspira murdochii DSM 12563 9143683 YP_003634943.1 CDS Bmur_2677 NC_014150.1 3035387 3036568 D TIGRFAM: galactokinase; KEGG: bhy:BHWA1_02655 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase domain protein; GHMP kinase; cyclic nucleotide-binding protein 3035387..3036568 Brachyspira murdochii DSM 12563 9143685 YP_003634944.1 CDS Bmur_2678 NC_014150.1 3036708 3037812 D manually curated; hypothetical protein join(3036708..3036779,3036781..3037812) Brachyspira murdochii DSM 12563 9143686 YP_003634945.1 CDS Bmur_2679 NC_014150.1 3038014 3038586 D KEGG: bhy:BHWA1_02657 hypothetical protein; hypothetical protein 3038014..3038586 Brachyspira murdochii DSM 12563 9143687 YP_003634946.1 CDS Bmur_2680 NC_014150.1 3038732 3039304 D KEGG: bhy:BHWA1_02658 hypothetical protein; hypothetical protein 3038732..3039304 Brachyspira murdochii DSM 12563 9143688 YP_003634947.1 CDS Bmur_2681 NC_014150.1 3039310 3040590 R PFAM: ankyrin; KEGG: bhy:BHWA1_00209 ankyrin repeat-containing protein; ankyrin complement(3039310..3040590) Brachyspira murdochii DSM 12563 9143689 YP_003634948.1 CDS Bmur_2682 NC_014150.1 3040768 3041340 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bhy:BHWA1_00210 HDIG domain protein; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 3040768..3041340 Brachyspira murdochii DSM 12563 9143690 YP_003634949.1 CDS Bmur_2683 NC_014150.1 3041358 3041999 D KEGG: bhy:BHWA1_00211 bifunctional pyrazinamidase/nicotinamidase; bifunctional pyrazinamidase/nicotinamidase 3041358..3041999 Brachyspira murdochii DSM 12563 9143691 YP_003634950.1 CDS Bmur_2684 NC_014150.1 3041996 3042529 D KEGG: bhy:BHWA1_00212 methylated DNA-protein cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3041996..3042529 Brachyspira murdochii DSM 12563 9143692 YP_003634951.1 CDS Bmur_2685 NC_014150.1 3042570 3043124 D PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00213 ribosomal-protein-S5-alanine acetyltransferase; N-acetyltransferase GCN5 3042570..3043124 Brachyspira murdochii DSM 12563 9143693 YP_003634952.1 CDS Bmur_2686 NC_014150.1 3043706 3044707 D PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_01503 quinone reductase; molecular chaperone GroES 3043706..3044707 Brachyspira murdochii DSM 12563 9143694 YP_003634953.1 CDS Bmur_2687 NC_014150.1 3044846 3045997 D KEGG: bhy:BHWA1_00569 sporulation stage II protein D, amidase enhancer LytB; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; SpoIID/LytB domain-containing protein 3044846..3045997 Brachyspira murdochii DSM 12563 9143695 YP_003634954.1 CDS Bmur_2688 NC_014150.1 3046082 3047452 R PFAM: aldehyde Dehydrogenase; KEGG: bhy:BHWA1_00568 aldehyde dehydrogenase YwdH; aldehyde dehydrogenase complement(3046082..3047452) Brachyspira murdochii DSM 12563 9143696 YP_003634955.1 CDS Bmur_2689 NC_014150.1 3047633 3049891 D PFAM: lytic transglycosylase catalytic; KEGG: bhy:BHWA1_00566 lytic transglycosylase catalytic; lytic transglycosylase 3047633..3049891 Brachyspira murdochii DSM 12563 9143697 YP_003634956.1 CDS Bmur_2690 NC_014150.1 3050360 3050785 R KEGG: bhy:BHWA1_00565 periplasmic protein; hypothetical protein complement(3050360..3050785) Brachyspira murdochii DSM 12563 9143698 YP_003634957.1 CDS Bmur_2691 NC_014150.1 3051073 3053643 R KEGG: bhy:BHWA1_00564 hypothetical protein; hypothetical protein complement(3051073..3053643) Brachyspira murdochii DSM 12563 9143699 YP_003634958.1 CDS Bmur_2692 NC_014150.1 3053859 3054440 R KEGG: hypothetical protein; hypothetical protein complement(3053859..3054440) Brachyspira murdochii DSM 12563 9143700 YP_003634959.1 CDS Bmur_2693 NC_014150.1 3054682 3055827 D PFAM: aminotransferase class V; KEGG: bhy:BHWA1_00563 serine-pyruvate/aspartate aminotransferase related enzyme; class V aminotransferase 3054682..3055827 Brachyspira murdochii DSM 12563 9143701 YP_003634960.1 CDS Bmur_2694 NC_014150.1 3056010 3057614 D KEGG: bhy:BHWA1_00562 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; amino acid-binding ACT domain protein; D- isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-3-phosphoglycerate dehydrogenase 3056010..3057614 Brachyspira murdochii DSM 12563 9143702 YP_003634961.1 CDS Bmur_2695 NC_014150.1 3057633 3058253 D TIGRFAM: phosphoserine phosphatase SerB; HAD- superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bhy:BHWA1_00561 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3057633..3058253 Brachyspira murdochii DSM 12563 9143703 YP_003634962.1 CDS Bmur_2696 NC_014150.1 3058444 3059787 R KEGG: pdi:BDI_1076 citrate synthase; PFAM: citrate synthase; citrate (Si)-synthase complement(3058444..3059787) Brachyspira murdochii DSM 12563 9143704 YP_003634963.1 CDS Bmur_2697 NC_014150.1 3059872 3061131 R TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: pdi:BDI_1075 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase complement(3059872..3061131) Brachyspira murdochii DSM 12563 9143705 YP_003634964.1 CDS Bmur_2698 NC_014150.1 3061227 3062102 R KEGG: bhy:BHWA1_01131 hypothetical protein; hypothetical protein complement(3061227..3062102) Brachyspira murdochii DSM 12563 9143706 YP_003634965.1 CDS Bmur_2699 NC_014150.1 3062323 3063405 R PFAM: ankyrin; KEGG: bhy:BHWA1_01125 ankyrin repeat-containing protein; ankyrin complement(3062323..3063405) Brachyspira murdochii DSM 12563 9143707 YP_003634966.1 CDS Bmur_2700 NC_014150.1 3063771 3064853 R KEGG: bhy:BHWA1_01126 hypothetical protein; hypothetical protein complement(3063771..3064853) Brachyspira murdochii DSM 12563 9143708 YP_003634967.1 CDS Bmur_2701 NC_014150.1 3065010 3066167 R PFAM: ankyrin; KEGG: bhy:BHWA1_01127 ankyrin repeat-containing protein; ankyrin complement(3065010..3066167) Brachyspira murdochii DSM 12563 9143709 YP_003634968.1 CDS Bmur_2702 NC_014150.1 3066313 3068568 R KEGG: pdi:BDI_1074 aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; aconitate hydratase complement(3066313..3068568) Brachyspira murdochii DSM 12563 9143710 YP_003634969.1 CDS Bmur_2703 NC_014150.1 3068743 3069240 D KEGG: bhy:BHWA1_00559 hypothetical protein; hypothetical protein 3068743..3069240 Brachyspira murdochii DSM 12563 9143711 YP_003634970.1 CDS Bmur_2704 NC_014150.1 3069321 3071636 R TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; KEGG: bhy:BHWA1_00403 ribonucleotide-diphosphate reductase alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP- cone domain protein; ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha complement(3069321..3071636) Brachyspira murdochii DSM 12563 9143712 YP_003634971.1 CDS Bmur_2705 NC_014150.1 3071688 3072761 R PFAM: ribonucleotide reductase; KEGG: bhy:BHWA1_00404 ribonucleoside-diphosphate reductase, beta subunit; ribonucleotide reductase complement(3071688..3072761) Brachyspira murdochii DSM 12563 9143713 YP_003634972.1 CDS Bmur_2706 NC_014150.1 3073318 3074757 D TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: bhy:BHWA1_00520 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20; aminoacyl-histidine dipeptidase 3073318..3074757 Brachyspira murdochii DSM 12563 9143714 YP_003634973.1 CDS Bmur_2707 NC_014150.1 3074834 3076768 D KEGG: cbl:CLK_1671 OPT family oligopeptide transporter; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; oligopeptide transporter 3074834..3076768 Brachyspira murdochii DSM 12563 9143715 YP_003634974.1 CDS Bmur_2708 NC_014150.1 3076906 3077319 D KEGG: cby:CLM_2436 hypothetical protein; hypothetical protein 3076906..3077319 Brachyspira murdochii DSM 12563 9143716 YP_003634975.1 CDS Bmur_2709 NC_014150.1 3077388 3078311 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bhy:BHWA1_00519 cysteine synthase A; pyridoxal-5'-phosphate-dependent protein subunit beta 3077388..3078311 Brachyspira murdochii DSM 12563 9143717 YP_003634976.1 CDS Bmur_2710 NC_014150.1 3078322 3079044 D KEGG: bhy:BHWA1_00518 serine acetyltransferase-like protein; serine O-acetyltransferase 3078322..3079044 Brachyspira murdochii DSM 12563 9143718 YP_003634977.1 CDS Bmur_2711 NC_014150.1 3079104 3079775 R KEGG: bhy:BHWA1_00619 hypothetical protein; hypothetical protein complement(3079104..3079775) Brachyspira murdochii DSM 12563 9143719 YP_003634978.1 CDS Bmur_2712 NC_014150.1 3079873 3081402 D KEGG: aau:AAur_0636 BNR/Asp-box repeat-containing protein; hypothetical protein 3079873..3081402 Brachyspira murdochii DSM 12563 9143720 YP_003634979.1 CDS Bmur_2713 NC_014150.1 3081561 3082583 D PFAM: PfkB domain protein; KEGG: bhy:BHWA1_00517 2-keto-3-deoxygluconate kinase; PfkB domain-containing protein 3081561..3082583 Brachyspira murdochii DSM 12563 9143721 YP_003634980.1 CDS Bmur_2714 NC_014150.1 3082657 3083613 D PFAM: ROK family protein; KEGG: bhy:BHWA1_00514 transcriptional regulator/sugar kinase; ROK family protein 3082657..3083613 Brachyspira murdochii DSM 12563 9143722 YP_003634981.1 CDS Bmur_2715 NC_014150.1 3083919 3084407 D KEGG: glo:Glov_1958 hypothetical protein; hypothetical protein 3083919..3084407 Brachyspira murdochii DSM 12563 9143723 YP_003634982.1 CDS Bmur_2716 NC_014150.1 3084397 3084948 D KEGG: glo:Glov_1958 hypothetical protein; hypothetical protein 3084397..3084948 Brachyspira murdochii DSM 12563 9143724 YP_003634983.1 CDS Bmur_2717 NC_014150.1 3085013 3087592 R TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase- like; KEGG: bhy:BHWA1_00583 ATP-dependent Clp protease, ATP-binding subunit ClpB; SMART: AAA ATPase; ATP-dependent chaperone ClpB complement(3085013..3087592) Brachyspira murdochii DSM 12563 9143725 YP_003634984.1 CDS Bmur_2718 NC_014150.1 3088319 3089047 D PFAM: peptidase C26; KEGG: tde:TDE0444 glutamine amidotransferase class I; peptidase C26 3088319..3089047 Brachyspira murdochii DSM 12563 9143726 YP_003634985.1 CDS Bmur_2719 NC_014150.1 3089069 3090352 D PFAM: amino acid permease-associated region; KEGG: tde:TDE0445 amino acid permease; amino acid permease 3089069..3090352 Brachyspira murdochii DSM 12563 9143727 YP_003634986.1 CDS Bmur_2720 NC_014150.1 3090531 3090926 D KEGG: cdl:CDR20291_2244 glycine reductase complex component; glycine reductase complex component 3090531..3090926 Brachyspira murdochii DSM 12563 9143728 YP_003634987.1 CDS Bmur_2721 NC_014150.1 3090950 3091909 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cdl:CDR20291_2243 thioredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3090950..3091909 Brachyspira murdochii DSM 12563 9143729 YP_003634988.1 CDS Bmur_2722 NC_014150.1 3092248 3093534 D PFAM: glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: aoe:Clos_0956 sarcosine reductase; glycine/sarcosine/betaine reductase complex protein B subunits alpha and beta 3092248..3093534 Brachyspira murdochii DSM 12563 9143730 YP_003634989.1 CDS Bmur_2723 NC_014150.1 3093590 3093724 D PFAM: glycine reductase complex selenoprotein A; KEGG: cdl:CDR20291_2240 glycine/sarcosine/betaine reductase complex component A; glycine reductase complex selenoprotein A 3093590..3093724 Brachyspira murdochii DSM 12563 9143731 YP_003634990.1 CDS Bmur_2724 NC_014150.1 3093740 3094063 D PFAM: glycine reductase complex selenoprotein A; KEGG: aoe:Clos_0957 glycine/sarcosine/betaine reductase complex protein A; glycine reductase complex selenoprotein A 3093740..3094063 Brachyspira murdochii DSM 12563 9143732 YP_003634991.1 CDS Bmur_2725 NC_014150.1 3094216 3095253 D KEGG: aoe:Clos_0958 selenoprotein B; TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase; PFAM: Selenoprotein B glycine/betaine/sarcosine/D- proline reductase; selenoprotein B, glycine/betaine/sarcosine/D- proline reductase 3094216..3095253 Brachyspira murdochii DSM 12563 9143733 YP_003634992.1 CDS Bmur_2726 NC_014150.1 3095281 3095514 D TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase; KEGG: shi:Shel_25230 glycine reductase, selenoprotein B; selenoprotein B, glycine/betaine/sarcosine/D- proline reductase 3095281..3095514 Brachyspira murdochii DSM 12563 9143734 YP_003634993.1 CDS Bmur_2727 NC_014150.1 3095670 3097256 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: aoe:Clos_0959 sarcosine reductase; 3-oxoacyl-ACP synthase 3095670..3097256 Brachyspira murdochii DSM 12563 9143735 YP_003634994.1 CDS Bmur_2728 NC_014150.1 3097268 3098443 D PFAM: fatty acid synthesis plsX protein; KEGG: aoe:Clos_0960 glycine reductase; fatty acid/phospholipid synthesis protein PlsX 3097268..3098443 Brachyspira murdochii DSM 12563 9143736 YP_003634995.1 CDS Bmur_2729 NC_014150.1 3098595 3099995 D KEGG: bhy:BHWA1_00582 sodium:alanine symporter family protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 3098595..3099995 Brachyspira murdochii DSM 12563 9143737 YP_003634996.1 CDS Bmur_2730 NC_014150.1 3100197 3101606 D KEGG: bhy:BHWA1_00582 sodium:alanine symporter family protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 3100197..3101606 Brachyspira murdochii DSM 12563 9143738 YP_003634997.1 CDS Bmur_2731 NC_014150.1 3101675 3102037 R KEGG: bhy:BHWA1_00581 methionine sulfoxide reductase B; PFAM: methionine sulfoxide reductase B; peptide-methionine (R)-S-oxide reductase complement(3101675..3102037) Brachyspira murdochii DSM 12563 9143739 YP_003634998.1 CDS Bmur_2732 NC_014150.1 3102078 3102650 R PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00580 sortase related acyltransferase; N-acetyltransferase GCN5 complement(3102078..3102650) Brachyspira murdochii DSM 12563 9143740 YP_003634999.1 CDS Bmur_2733 NC_014150.1 3103001 3103816 D KEGG: bhy:BHWA1_00513 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 3103001..3103816 Brachyspira murdochii DSM 12563 9143741 YP_003635000.1 CDS Bmur_2734 NC_014150.1 3103861 3104715 D KEGG: bhy:BHWA1_00512 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts 3103861..3104715 Brachyspira murdochii DSM 12563 9143742 YP_003635001.1 CDS Bmur_2735 NC_014150.1 3104882 3106243 R PFAM: hypothetical protein; KEGG: bhy:BHWA1_00511 TPR domain-containing protein; hypothetical protein complement(3104882..3106243) Brachyspira murdochii DSM 12563 9143743 YP_003635002.1 CDS Bmur_2736 NC_014150.1 3106258 3107298 R KEGG: bhy:BHWA1_00510 hypothetical protein; hypothetical protein complement(3106258..3107298) Brachyspira murdochii DSM 12563 9143744 YP_003635003.1 CDS Bmur_2737 NC_014150.1 3107308 3109479 R PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: bhy:BHWA1_00509 L-lactate dehydrogenase; ATPase complement(3107308..3109479) Brachyspira murdochii DSM 12563 9143745 YP_003635004.1 CDS Bmur_2738 NC_014150.1 3109703 3110053 D KEGG: bhy:BHWA1_00363 tRNA bind CsaA, tR-binding- domain-containing CsaA-like proteins; TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; export-related chaperone CsaA 3109703..3110053 Brachyspira murdochii DSM 12563 9143746 YP_003635005.1 CDS Bmur_2739 NC_014150.1 3110164 3111858 R KEGG: bhy:BHWA1_00750 DNA or RNA helicase of superfamily II; PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; helicase domain-containing protein complement(3110164..3111858) Brachyspira murdochii DSM 12563 9143747 YP_003635006.1 CDS Bmur_2740 NC_014150.1 3111930 3112622 R PFAM: Tetratricopeptide TPR_3; KEGG: bhy:BHWA1_00749 TPR domain-containing protein; Tetratricopeptide TPR_3 complement(3111930..3112622) Brachyspira murdochii DSM 12563 9143748 YP_003635007.1 CDS Bmur_2741 NC_014150.1 3112798 3113832 D KEGG: bhy:BHWA1_00748 hypothetical protein; hypothetical protein 3112798..3113832 Brachyspira murdochii DSM 12563 9143749 YP_003635008.1 CDS Bmur_2742 NC_014150.1 3113920 3114915 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bhy:BHWA1_00747 lactate dehydrogenase-like dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 3113920..3114915 Brachyspira murdochii DSM 12563 9143750 YP_003635009.1 CDS Bmur_2743 NC_014150.1 3115059 3116687 D PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_00746 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 3115059..3116687 Brachyspira murdochii DSM 12563 9143751 YP_003635010.1 CDS Bmur_2744 NC_014150.1 3117269 3118615 D KEGG: bhy:BHWA1_00147 lytic transglycosylase, catalytic; PFAM: lytic transglycosylase catalytic; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; lytic transglycosylase 3117269..3118615 Brachyspira murdochii DSM 12563 9143752 YP_003635011.1 CDS Bmur_2745 NC_014150.1 3118839 3120509 R KEGG: bhy:BHWA1_00143 Na+/phosphate symporter; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; Na/Pi-cotransporter II-like protein complement(3118839..3120509) Brachyspira murdochii DSM 12563 9143753 YP_003635012.1 CDS Bmur_2746 NC_014150.1 3120638 3120841 R PFAM: TM2 domain containing protein; KEGG: bhy:BHWA1_00609 TM2 domain family protein; TM2 domain-containing protein complement(3120638..3120841) Brachyspira murdochii DSM 12563 9143754 YP_003635013.1 CDS Bmur_2747 NC_014150.1 3121092 3122696 D KEGG: bhy:BHWA1_00364 TPR domain-containing protein; hypothetical protein 3121092..3122696 Brachyspira murdochii DSM 12563 9143755 YP_003635014.1 CDS Bmur_2748 NC_014150.1 3122874 3124787 D SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: bhy:BHWA1_00601 D gyrase B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; ATP- binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B 3122874..3124787 Brachyspira murdochii DSM 12563 9143756 YP_003635015.1 CDS Bmur_2749 NC_014150.1 3124885 3125847 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bhy:BHWA1_00602 thioredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3124885..3125847 Brachyspira murdochii DSM 12563 9143757 YP_003635016.1 CDS Bmur_2750 NC_014150.1 3125904 3126335 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_01369 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3125904..3126335 Brachyspira murdochii DSM 12563 9143758 YP_003635017.1 CDS Bmur_2751 NC_014150.1 3126346 3126648 D PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; KEGG: bhy:BHWA1_00603 phosphotransferase enzyme II, B compnent SgaB; PTS system lactose/cellobiose-specific transporter subunit IIB 3126346..3126648 Brachyspira murdochii DSM 12563 9143759 YP_003635018.1 CDS Bmur_2752 NC_014150.1 3126734 3128575 R PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: bhy:BHWA1_00606 UshA, 5'-nucleotidase/2',3'- cyclic phosphodiesterase-like esterase; 5'-nucleotidase complement(3126734..3128575) Brachyspira murdochii DSM 12563 9143760 YP_003635019.1 CDS Bmur_2753 NC_014150.1 3128634 3128993 R KEGG: bhy:BHWA1_00607 hypothetical protein; hypothetical protein complement(3128634..3128993) Brachyspira murdochii DSM 12563 9143761 YP_003635020.1 CDS Bmur_2754 NC_014150.1 3129021 3129320 R KEGG: hypothetical protein; hypothetical protein complement(3129021..3129320) Brachyspira murdochii DSM 12563 9143762 YP_003635021.1 CDS Bmur_2755 NC_014150.1 3129485 3131305 D KEGG: bhy:BHWA1_00608 peptidase; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; oligoendopeptidase F 3129485..3131305 Brachyspira murdochii DSM 12563 9143763 YP_003635022.1 CDS Bmur_2756 NC_014150.1 3131432 3131635 D PFAM: TM2 domain containing protein; KEGG: bhy:BHWA1_00609 TM2 domain family protein; TM2 domain-containing protein 3131432..3131635 Brachyspira murdochii DSM 12563 9143764 YP_003635023.1 CDS Bmur_2757 NC_014150.1 3131739 3132554 R PFAM: phosphomethylpyrimidine kinase type-1; KEGG: bhy:BHWA1_00227 pyridoxamine kinase; phosphomethylpyrimidine kinase type-1 complement(3131739..3132554) Brachyspira murdochii DSM 12563 9143765 YP_003635024.1 CDS Bmur_2758 NC_014150.1 3132565 3132789 R KEGG: bhy:BHWA1_00228 hypothetical protein; hypothetical protein complement(3132565..3132789) Brachyspira murdochii DSM 12563 9143766 YP_003635025.1 CDS Bmur_2759 NC_014150.1 3132929 3133981 R KEGG: bhy:BHWA1_00230 hypothetical protein; hypothetical protein complement(3132929..3133981) Brachyspira murdochii DSM 12563 9143767 YP_003635026.1 CDS Bmur_2760 NC_014150.1 3134441 3137077 D TIGRFAM: calcium-translocating P-type ATPase, PMCA- type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bhy:BHWA1_00231 cation transport ATPase; SMART: cation transporting ATPase domain protein; calcium-translocating P-type ATPase 3134441..3137077 Brachyspira murdochii DSM 12563 9143768 YP_003635027.1 CDS Bmur_2761 NC_014150.1 3137278 3138684 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_00232 TPR domain-containing protein; hypothetical protein 3137278..3138684 Brachyspira murdochii DSM 12563 9143769 YP_003635028.1 CDS Bmur_2762 NC_014150.1 3138806 3139387 D PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bhy:BHWA1_00233 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 3138806..3139387 Brachyspira murdochii DSM 12563 9143770 YP_003635029.1 CDS Bmur_2763 NC_014150.1 3139411 3139833 D KEGG: bhy:BHWA1_00234 positive regulator of sigma E, RseC/MucC; sigma E positive regulator RseC/MucC 3139411..3139833 Brachyspira murdochii DSM 12563 9143771 YP_003635030.1 CDS Bmur_2764 NC_014150.1 3139852 3140301 D KEGG: bhy:BHWA1_00235 hypothetical protein; hypothetical protein 3139852..3140301 Brachyspira murdochii DSM 12563 9143772 YP_003635031.1 CDS Bmur_2765 NC_014150.1 3140309 3142609 R PFAM: glycoside hydrolase 57; KEGG: bhy:BHWA1_00236 glycoside hydrolase, family 57; glycoside hydrolase 57 complement(3140309..3142609) Brachyspira murdochii DSM 12563 9143773 YP_003635032.1 CDS Bmur_2766 NC_014150.1 3142796 3144301 D KEGG: bhy:BHWA1_00237 hypothetical protein; hypothetical protein 3142796..3144301 Brachyspira murdochii DSM 12563 9143774 YP_003635033.1 CDS Bmur_2767 NC_014150.1 3144321 3145043 D TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bhy:BHWA1_00238 hemolysin protein; SMART: RNA-binding S4 domain protein; hemolysin A 3144321..3145043 Brachyspira murdochii DSM 12563 9143775 YP_003635034.1 CDS Bmur_2768 NC_014150.1 3145040 3146245 R PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_00239 cAMP-binding protein; Crp/Fnr family transcriptional regulator complement(3145040..3146245) Brachyspira murdochii DSM 12563 9143776 YP_003635035.1 CDS Bmur_2769 NC_014150.1 3146296 3147456 R PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_00240 cAMP-binding protein; Crp/Fnr family transcriptional regulator complement(3146296..3147456) Brachyspira murdochii DSM 12563 9143777 YP_003635036.1 CDS Bmur_2770 NC_014150.1 3147618 3148772 R PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_00242 hypothetical protein; Crp/Fnr family transcriptional regulator complement(3147618..3148772) Brachyspira murdochii DSM 12563 9143778 YP_003635037.1 CDS Bmur_2771 NC_014150.1 3148870 3150024 R PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_00243 hypothetical protein; Crp/Fnr family transcriptional regulator complement(3148870..3150024) Brachyspira murdochii DSM 12563 9143779 YP_003635038.1 CDS Bmur_2772 NC_014150.1 3150087 3151244 R KEGG: bhy:BHWA1_00244 cAMP-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(3150087..3151244) Brachyspira murdochii DSM 12563 9143780 YP_003635039.1 CDS Bmur_2773 NC_014150.1 3151384 3152571 R KEGG: bhy:BHWA1_00245 cAMP-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(3151384..3152571) Brachyspira murdochii DSM 12563 9143781 YP_003635040.1 CDS Bmur_2774 NC_014150.1 3152652 3153335 R KEGG: bhy:BHWA1_00708 hypothetical protein; hypothetical protein complement(3152652..3153335) Brachyspira murdochii DSM 12563 9143782 YP_003635041.1 CDS Bmur_2775 NC_014150.1 3153372 3155189 R PFAM: protein of unknown function DUF187; KEGG: bhy:BHWA1_00707 hypothetical protein; hypothetical protein complement(3153372..3155189) Brachyspira murdochii DSM 12563 9143783 YP_003635042.1 CDS Bmur_2776 NC_014150.1 3155357 3155674 R PFAM: Thioredoxin domain; KEGG: cbi:CLJ_B1303 thioredoxin family protein; thioredoxin complement(3155357..3155674) Brachyspira murdochii DSM 12563 9143784 YP_003635043.1 CDS Bmur_2777 NC_014150.1 3155846 3156556 D KEGG: bhy:BHWA1_00705 hypothetical protein; hypothetical protein 3155846..3156556 Brachyspira murdochii DSM 12563 9143785 YP_003635044.1 CDS Bmur_2778 NC_014150.1 3156576 3157793 D PFAM: N-6 DNA methylase; KEGG: bhy:BHWA1_00704 modification methylase; N-6 DNA methylase 3156576..3157793 Brachyspira murdochii DSM 12563 9143786 YP_003635045.1 CDS Bmur_2779 NC_014150.1 3158183 3158530 D KEGG: bhy:BHWA1_00137 hypothetical protein; hypothetical protein 3158183..3158530 Brachyspira murdochii DSM 12563 9143787 YP_003635046.1 CDS Bmur_2780 NC_014150.1 3158590 3160047 D PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bhy:BHWA1_00138 hypothetical protein; hypothetical protein 3158590..3160047 Brachyspira murdochii DSM 12563 9143788 YP_003635047.1 CDS Bmur_2781 NC_014150.1 3160291 3160794 D KEGG: bhy:BHWA1_00139 flavin reductase- like, FMN-binding; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein 3160291..3160794 Brachyspira murdochii DSM 12563 9143789 YP_003635048.1 CDS Bmur_2782 NC_014150.1 3160910 3162250 R KEGG: bhy:BHWA1_00140 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SMART: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase complement(3160910..3162250) Brachyspira murdochii DSM 12563 9143790 YP_003635049.1 CDS Bmur_2783 NC_014150.1 3162440 3162982 D KEGG: bhy:BHWA1_00969 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3162440..3162982 Brachyspira murdochii DSM 12563 9143791 YP_003635050.1 CDS Bmur_2784 NC_014150.1 3163047 3164507 D KEGG: hhe:HH0050 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3163047..3164507 Brachyspira murdochii DSM 12563 9143792 YP_003635051.1 CDS Bmur_2785 NC_014150.1 3164617 3165774 D TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_00811 AbgB, metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3164617..3165774 Brachyspira murdochii DSM 12563 9143793 YP_003635052.1 CDS Bmur_2786 NC_014150.1 3165988 3168561 D KEGG: bhy:BHWA1_00756 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3165988..3168561 Brachyspira murdochii DSM 12563 9143794 YP_003635053.1 CDS Bmur_2787 NC_014150.1 3168952 3171540 D KEGG: bhy:BHWA1_00752 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3168952..3171540 Brachyspira murdochii DSM 12563 9143795 YP_003635054.1 CDS Bmur_2788 NC_014150.1 3171641 3174043 D KEGG: bhy:BHWA1_00755 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3171641..3174043 Brachyspira murdochii DSM 12563 9143796 YP_003635055.1 CDS Bmur_2789 NC_014150.1 3174087 3175274 D KEGG: bhy:BHWA1_00751 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3174087..3175274 Brachyspira murdochii DSM 12563 9143797 YP_003635056.1 CDS Bmur_2790 NC_014150.1 3175330 3177918 D KEGG: bhy:BHWA1_00751 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3175330..3177918 Brachyspira murdochii DSM 12563 9143798 YP_003635057.1 CDS Bmur_2791 NC_014150.1 3178193 3178996 D PFAM: flagellin domain protein; KEGG: bhy:BHWA1_00550 flagellar protein; flagellin domain-containing protein 3178193..3178996 Brachyspira murdochii DSM 12563 9143799 YP_003635058.1 CDS Bmur_2792 NC_014150.1 3179215 3179730 D PFAM: Ferritin Dps family protein; KEGG: bhy:BHWA1_00136 non-heme iron-containing ferritin; ferritin 3179215..3179730 Brachyspira murdochii DSM 12563 9143800 YP_003635059.1 CDS Bmur_2793 NC_014150.1 3179785 3180627 R KEGG: cpe:CPE0551 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; agmatinase complement(3179785..3180627) Brachyspira murdochii DSM 12563 9143801 YP_003635060.1 CDS Bmur_2794 NC_014150.1 3180620 3181480 R KEGG: aoe:Clos_0384 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; spermidine synthase complement(3180620..3181480) Brachyspira murdochii DSM 12563 9143802 YP_003635061.1 CDS Bmur_2795 NC_014150.1 3181482 3182939 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: dhd:Dhaf_0181 Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase major region complement(3181482..3182939) Brachyspira murdochii DSM 12563 9143803 YP_003635062.1 CDS Bmur_2796 NC_014150.1 3182920 3183732 R KEGG: cbk:CLL_A1011 S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase complement(3182920..3183732) Brachyspira murdochii DSM 12563 9143804 YP_003635063.1 CDS Bmur_2797 NC_014150.1 3184311 3184841 D PFAM: Ferritin Dps family protein; KEGG: bhy:BHWA1_00697 non-heme iron-containing ferritin; ferritin 3184311..3184841 Brachyspira murdochii DSM 12563 9143805 YP_003635064.1 CDS Bmur_2798 NC_014150.1 3184874 3185707 D KEGG: bhy:BHWA1_00696 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3184874..3185707 Brachyspira murdochii DSM 12563 9143806 YP_003635065.1 CDS Bmur_2799 NC_014150.1 3185772 3186701 R KEGG: bhy:BHWA1_00695 hypothetical protein; hypothetical protein complement(3185772..3186701) Brachyspira murdochii DSM 12563 9143807 YP_003635066.1 CDS Bmur_2800 NC_014150.1 3186774 3187199 R KEGG: bhy:BHWA1_00694 Holliday junction resolvase; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF complement(3186774..3187199) Brachyspira murdochii DSM 12563 9143808 YP_003635067.1 CDS Bmur_2801 NC_014150.1 3187216 3188451 R PFAM: peptidase U32; KEGG: bhy:BHWA1_00693 peptidase; peptidase U32 complement(3187216..3188451) Brachyspira murdochii DSM 12563 9143809 YP_003635068.1 CDS Bmur_2802 NC_014150.1 3188938 3190464 R KEGG: bhy:BHWA1_00629 UDP-N-acetylmuramoylalanyl-D- glutamate--2,6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase complement(3188938..3190464) Brachyspira murdochii DSM 12563 9143810 YP_003635069.1 CDS Bmur_2803 NC_014150.1 3190642 3192144 D TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: bhy:BHWA1_00628 glycogen/starch synthase, ADP- glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; glycogen/starch synthase 3190642..3192144 Brachyspira murdochii DSM 12563 9143811 YP_003635070.1 CDS Bmur_2804 NC_014150.1 3192187 3192684 D PFAM: protein of unknown function DUF520; KEGG: bhy:BHWA1_00627 nucleotide-binding protein; hypothetical protein 3192187..3192684 Brachyspira murdochii DSM 12563 9143812 YP_003635071.1 CDS Bmur_2805 NC_014150.1 3192765 3193391 R TIGRFAM: LexA repressor; KEGG: bhy:BHWA1_00626 LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24/S26A/S26B, conserved region; LexA family transcriptional regulator complement(3192765..3193391) Brachyspira murdochii DSM 12563 9143813 YP_003635072.1 CDS Bmur_2806 NC_014150.1 3193564 3194214 R TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bhy:BHWA1_00002 ribulose-phosphate 3- epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(3193564..3194214) Brachyspira murdochii DSM 12563 9143814 YP_003635073.1 CDS Bmur_2807 NC_014150.1 3194254 3194994 R SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: bhy:BHWA1_02665 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III complement(3194254..3194994) Brachyspira murdochii DSM 12563 9143815 YP_003635074.1 CDS Bmur_2808 NC_014150.1 3195091 3196680 R SMART: von Willebrand factor type A; KEGG: bhy:BHWA1_02664 hypothetical protein containing a von Willebrand factor type A (vWA) domain; von Willebrand factor A complement(3195091..3196680) Brachyspira murdochii DSM 12563 9143816 YP_003635075.1 CDS Bmur_2809 NC_014150.1 3196712 3198292 R KEGG: bhy:BHWA1_02663 AAA+ ATPase associated with various cellular activities; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA complement(3196712..3198292) Brachyspira murdochii DSM 12563 9143817 YP_003635076.1 CDS Bmur_2810 NC_014150.1 3198822 3199769 D KEGG: bhy:BHWA1_02662 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3198822..3199769 Brachyspira murdochii DSM 12563 9143818 YP_003635077.1 CDS Bmur_2811 NC_014150.1 3199770 3200513 D KEGG: bhy:BHWA1_02661 ABC transporter permease; ABC transporter permease 3199770..3200513 Brachyspira murdochii DSM 12563 9143819 YP_003635078.1 CDS Bmur_2812 NC_014150.1 3200552 3201580 D KEGG: bhy:BHWA1_02660 hypothetical protein; hypothetical protein 3200552..3201580 Brachyspira murdochii DSM 12563 9143820 YP_003635079.1 CDS Bmur_2813 NC_014150.1 3201597 3202154 D KEGG: bhy:BHWA1_02659 CDP-diacylglycerol--glycerol- 3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 3201597..3202154 Brachyspira murdochii DSM 12563 9143821 YP_003635080.1 CDS Bmur_2814 NC_014150.1 3202636 3203838 R PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_00557 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(3202636..3203838) Brachyspira murdochii DSM 12563 9143822 YP_003635081.1 CDS Bmur_2815 NC_014150.1 3204267 3204662 D KEGG: similar to conserved hypothetical protein; hypothetical protein 3204267..3204662 Brachyspira murdochii DSM 12563 9143823 YP_003635082.1 CDS Bmur_2816 NC_014150.1 3204687 3204890 D KEGG: bhy:BHWA1_02400 hypothetical protein; hypothetical protein 3204687..3204890 Brachyspira murdochii DSM 12563 9143824 YP_003635083.1 CDS Bmur_2817 NC_014150.1 3204954 3205517 D KEGG: bhy:BHWA1_02397 hypothetical protein; hypothetical protein 3204954..3205517 Brachyspira murdochii DSM 12563 9143825 YP_003635084.1 CDS Bmur_2818 NC_014150.1 3205530 3206123 D KEGG: bhy:BHWA1_01787 OmpA family protein; hypothetical protein 3205530..3206123 Brachyspira murdochii DSM 12563 9143826 YP_003635085.1 CDS Bmur_2819 NC_014150.1 3206141 3206488 D KEGG: bhy:BHWA1_00619 hypothetical protein; hypothetical protein 3206141..3206488 Brachyspira murdochii DSM 12563 9143827 YP_003635086.1 CDS Bmur_2820 NC_014150.1 3206463 3206807 D KEGG: bhy:BHWA1_00619 hypothetical protein; hypothetical protein 3206463..3206807 Brachyspira murdochii DSM 12563 9143828 YP_003635087.1 CDS Bmur_2821 NC_014150.1 3206911 3207810 R PFAM: protein of unknown function DUF62; KEGG: bhy:BHWA1_00732 hypothetical protein; hypothetical protein complement(3206911..3207810) Brachyspira murdochii DSM 12563 9143829 YP_003635088.1 CDS Bmur_2822 NC_014150.1 3208059 3209021 R TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: bhy:BHWA1_00731 fructose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-1,6-bisphosphate aldolase complement(3208059..3209021) Brachyspira murdochii DSM 12563 9143830 YP_003635089.1 CDS Bmur_2823 NC_014150.1 3209373 3211304 D SMART: Threonyl/alanyl tRNA synthetase SAD; TIGRFAM: threonyl-tRNA synthetase; KEGG: bhy:BHWA1_00727 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; threonyl-tRNA synthetase 3209373..3211304 Brachyspira murdochii DSM 12563 9143831 YP_003635090.1 CDS Bmur_2824 NC_014150.1 3211317 3211895 D KEGG: bhy:BHWA1_00726 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like; translation initiation factor IF-3 3211317..3211895 Brachyspira murdochii DSM 12563 9143832 YP_003635091.1 CDS Bmur_2825 NC_014150.1 3211990 3212193 D KEGG: bhy:BHWA1_00725 RpmI, 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; 50S ribosomal protein L35 3211990..3212193 Brachyspira murdochii DSM 12563 9143833 YP_003635092.1 CDS Bmur_2826 NC_014150.1 3212209 3212562 D KEGG: bhy:BHWA1_00724 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 3212209..3212562 Brachyspira murdochii DSM 12563 9143834 YP_003635093.1 CDS Bmur_2827 NC_014150.1 3212805 3213920 R PFAM: OmpA/MotB domain protein; KEGG: predicted protein; OmpA/MotB domain-containing protein complement(3212805..3213920) Brachyspira murdochii DSM 12563 9143835 YP_003635094.1 CDS Bmur_2828 NC_014150.1 3213987 3215492 R KEGG: bhy:BHWA1_02397 hypothetical protein; hypothetical protein complement(3213987..3215492) Brachyspira murdochii DSM 12563 9143836 YP_003635095.1 CDS Bmur_2829 NC_014150.1 3215519 3216742 R KEGG: transporter; hypothetical protein complement(3215519..3216742) Brachyspira murdochii DSM 12563 9143837 YP_003635096.1 CDS Bmur_2830 NC_014150.1 3216783 3218003 R KEGG: hypothetical protein; hypothetical protein complement(3216783..3218003) Brachyspira murdochii DSM 12563 9143838 YP_003635097.1 CDS Bmur_2831 NC_014150.1 3218019 3219233 R KEGG: hypothetical protein; hypothetical protein complement(3218019..3219233) Brachyspira murdochii DSM 12563 9143839 YP_003635098.1 CDS Bmur_2832 NC_014150.1 3219246 3219473 R KEGG: hypothetical protein; hypothetical protein complement(3219246..3219473) Brachyspira murdochii DSM 12563 9143840 YP_003635099.1 CDS Bmur_2833 NC_014150.1 3220391 3221266 R KEGG: bhy:BHWA1_00616 pseudouridylate synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B complement(3220391..3221266) Brachyspira murdochii DSM 12563 9143841 YP_003635100.1 CDS Bmur_2834 NC_014150.1 3221308 3222051 R KEGG: bhy:BHWA1_00615 hypothetical protein; hypothetical protein complement(3221308..3222051) Brachyspira murdochii DSM 12563 9143842 YP_003635101.1 CDS Bmur_2835 NC_014150.1 3222169 3222792 D KEGG: bhy:BHWA1_00614 hypothetical protein; hypothetical protein 3222169..3222792 Brachyspira murdochii DSM 12563 9143843 YP_003635102.1 CDS Bmur_2836 NC_014150.1 3222850 3224022 R PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3695 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3222850..3224022) Brachyspira murdochii DSM 12563 9143844 YP_003635103.1 CDS Bmur_2837 NC_014150.1 3224207 3224851 R KEGG: bhy:BHWA1_00399 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU complement(3224207..3224851) Brachyspira murdochii DSM 12563 9143845 YP_003635104.1 CDS Bmur_2838 NC_014150.1 3224903 3225700 R TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; KEGG: bhy:BHWA1_00400 phosphate ABC transporter, ATP-binding protein; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(3224903..3225700) Brachyspira murdochii DSM 12563 9143846 YP_003635105.1 CDS Bmur_2839 NC_014150.1 3225733 3227523 R KEGG: bhy:BHWA1_00401 phosphate ABC transporter, permease; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(3225733..3227523) Brachyspira murdochii DSM 12563 9143847 YP_003635106.1 CDS Bmur_2840 NC_014150.1 3227644 3228450 R KEGG: bhy:BHWA1_00402 phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein complement(3227644..3228450) Brachyspira murdochii DSM 12563 9143848 YP_003635107.1 CDS Bmur_2841 NC_014150.1 3228676 3229188 R PFAM: Protein of unknown function DUF2147; KEGG: bhy:BHWA1_00182 hypothetical protein; hypothetical protein complement(3228676..3229188) Brachyspira murdochii DSM 12563 9143849 YP_003635108.1 CDS Bmur_2842 NC_014150.1 3229333 3230457 D KEGG: bhy:BHWA1_00183 aminopeptidase; aminopeptidase 3229333..3230457 Brachyspira murdochii DSM 12563 9143850 YP_003635109.1 CDS Bmur_2843 NC_014150.1 3230474 3230968 D PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00184 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 3230474..3230968 Brachyspira murdochii DSM 12563 9143851 YP_003635110.1 CDS Bmur_2844 NC_014150.1 3231422 3232126 D TIGRFAM: uridylate kinase; KEGG: bhy:BHWA1_00186 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 3231422..3232126 Brachyspira murdochii DSM 12563 9143852 YP_003635111.1 CDS Bmur_2845 NC_014150.1 3232150 3233166 D KEGG: bhy:BHWA1_00187 hypothetical protein; hypothetical protein 3232150..3233166 Brachyspira murdochii DSM 12563 9143853 YP_003635112.1 CDS Bmur_2846 NC_014150.1 3233399 3233716 R KEGG: bhy:BHWA1_00215 hypothetical protein; hypothetical protein complement(3233399..3233716) Brachyspira murdochii DSM 12563 9143854 YP_003635113.1 CDS Bmur_2847 NC_014150.1 3233713 3234003 R KEGG: bhy:BHWA1_00214 hypothetical protein; hypothetical protein complement(3233713..3234003) Brachyspira murdochii DSM 12563 9143855 YP_003635114.1 CDS Bmur_2848 NC_014150.1 3234104 3234775 R KEGG: bhy:BHWA1_02058 hypothetical protein; hypothetical protein complement(3234104..3234775) Brachyspira murdochii DSM 12563 9143856 YP_003635115.1 CDS Bmur_2849 NC_014150.1 3235044 3236534 D KEGG: bhy:BHWA1_00372 hypothetical protein; hypothetical protein 3235044..3236534 Brachyspira murdochii DSM 12563 9143857 YP_003635116.1 CDS Bmur_2850 NC_014150.1 3236551 3237450 D PFAM: patatin; KEGG: bhy:BHWA1_00371 patatin-like phospholipase; patatin 3236551..3237450 Brachyspira murdochii DSM 12563 9143858 YP_003635117.1 CDS Bmur_2851 NC_014150.1 3237452 3237757 R KEGG: hypothetical protein; hypothetical protein complement(3237452..3237757) Brachyspira murdochii DSM 12563 9143859 YP_003635118.1 CDS Bmur_2852 NC_014150.1 3237754 3238836 R PFAM: glycosyl transferase group 1; KEGG: bhy:BHWA1_00225 hypothetical protein; group 1 glycosyl transferase complement(3237754..3238836) Brachyspira murdochii DSM 12563 9143860 YP_003635119.1 CDS Bmur_2853 NC_014150.1 3238909 3241650 D PFAM: hypothetical protein; KEGG: bhy:BHWA1_00226 TPR domain-containing protein; hypothetical protein 3238909..3241650 Brachyspira murdochii DSM 12563 9143861 Bmur_R0001 tRNA Bmur_R0001 NC_014150.1 17792 17862 D tRNA-Cys 17792..17862 Brachyspira murdochii DSM 12563 9140984 Bmur_R0002 tRNA Bmur_R0002 NC_014150.1 86476 86549 D tRNA-Ile 86476..86549 Brachyspira murdochii DSM 12563 9141040 Bmur_R0003 tRNA Bmur_R0003 NC_014150.1 86579 86652 D tRNA-Ala 86579..86652 Brachyspira murdochii DSM 12563 9141041 Bmur_R0004 tRNA Bmur_R0004 NC_014150.1 233058 233138 R tRNA-Leu complement(233058..233138) Brachyspira murdochii DSM 12563 9141140 Bmur_R0005 tRNA Bmur_R0005 NC_014150.1 284280 284353 R tRNA-Met complement(284280..284353) Brachyspira murdochii DSM 12563 9141177 Bmur_R0006 tRNA Bmur_R0006 NC_014150.1 284385 284457 R tRNA-Met complement(284385..284457) Brachyspira murdochii DSM 12563 9141178 Bmur_R0007 tRNA Bmur_R0007 NC_014150.1 453094 453166 R tRNA-Thr complement(453094..453166) Brachyspira murdochii DSM 12563 9141331 Bmur_R0008 tRNA Bmur_R0008 NC_014150.1 615075 615160 D tRNA-Ser 615075..615160 Brachyspira murdochii DSM 12563 9141474 Bmur_R0009 tRNA Bmur_R0009 NC_014150.1 775887 775969 D tRNA-Tyr 775887..775969 Brachyspira murdochii DSM 12563 9141615 Bmur_R0010 tRNA Bmur_R0010 NC_014150.1 843326 843407 D tRNA-Leu 843326..843407 Brachyspira murdochii DSM 12563 9141686 Bmur_R0011 tRNA Bmur_R0011 NC_014150.1 890485 890557 R tRNA-Arg complement(890485..890557) Brachyspira murdochii DSM 12563 9141723 Bmur_R0012 tRNA Bmur_R0012 NC_014150.1 890590 890672 R tRNA-Ser complement(890590..890672) Brachyspira murdochii DSM 12563 9141724 Bmur_R0013 tRNA Bmur_R0013 NC_014150.1 921630 921701 R tRNA-Gln complement(921630..921701) Brachyspira murdochii DSM 12563 9141753 Bmur_R0014 tRNA Bmur_R0014 NC_014150.1 981455 981527 D tRNA-Asn 981455..981527 Brachyspira murdochii DSM 12563 9141805 Bmur_R0015 tRNA Bmur_R0015 NC_014150.1 1188563 1188636 R tRNA-Ala complement(1188563..1188636) Brachyspira murdochii DSM 12563 9141996 Bmur_R0016 tRNA Bmur_R0016 NC_014150.1 1225340 1225412 D tRNA-Val 1225340..1225412 Brachyspira murdochii DSM 12563 9142025 Bmur_R0019 tRNA Bmur_R0019 NC_014150.1 1469591 1469665 R tRNA-Asp complement(1469591..1469665) Brachyspira murdochii DSM 12563 9142251 Bmur_R0020 tRNA Bmur_R0020 NC_014150.1 1566948 1567019 R tRNA-Gly complement(1566948..1567019) Brachyspira murdochii DSM 12563 9142347 Bmur_R0021 tRNA Bmur_R0021 NC_014150.1 1649299 1649372 D tRNA-Met 1649299..1649372 Brachyspira murdochii DSM 12563 9142434 Bmur_R0022 tRNA Bmur_R0022 NC_014150.1 1744377 1744450 D tRNA-Pro 1744377..1744450 Brachyspira murdochii DSM 12563 9142516 Bmur_R0023 tRNA Bmur_R0023 NC_014150.1 1744453 1744526 D tRNA-Arg 1744453..1744526 Brachyspira murdochii DSM 12563 9142517 Bmur_R0024 tRNA Bmur_R0024 NC_014150.1 1744610 1744683 D tRNA-His 1744610..1744683 Brachyspira murdochii DSM 12563 9142518 Bmur_R0025 tRNA Bmur_R0025 NC_014150.1 1745526 1745599 D tRNA-Arg 1745526..1745599 Brachyspira murdochii DSM 12563 9142520 Bmur_R0026 tRNA Bmur_R0026 NC_014150.1 1810395 1810479 D tRNA-Leu 1810395..1810479 Brachyspira murdochii DSM 12563 9142569 Bmur_R0027 tRNA Bmur_R0027 NC_014150.1 1905653 1905725 D tRNA-Thr 1905653..1905725 Brachyspira murdochii DSM 12563 9142648 Bmur_R0029 tRNA Bmur_R0029 NC_014150.1 1921384 1921456 R tRNA-Thr complement(1921384..1921456) Brachyspira murdochii DSM 12563 9142660 Bmur_R0031 tRNA Bmur_R0031 NC_014150.1 2199898 2199981 R tRNA-Leu complement(2199898..2199981) Brachyspira murdochii DSM 12563 9142926 Bmur_R0032 tRNA Bmur_R0032 NC_014150.1 2225502 2225574 D tRNA-Trp 2225502..2225574 Brachyspira murdochii DSM 12563 9142950 Bmur_R0034 tRNA Bmur_R0034 NC_014150.1 2296057 2296129 D tRNA-Gly 2296057..2296129 Brachyspira murdochii DSM 12563 9143018 Bmur_R0035 tRNA Bmur_R0035 NC_014150.1 2706706 2706779 D tRNA-Arg 2706706..2706779 Brachyspira murdochii DSM 12563 9143399 Bmur_R0036 tRNA Bmur_R0036 NC_014150.1 2706792 2706877 D tRNA-Ser 2706792..2706877 Brachyspira murdochii DSM 12563 9143400 Bmur_R0039 tRNA Bmur_R0039 NC_014150.1 2951380 2951452 D tRNA-Phe 2951380..2951452 Brachyspira murdochii DSM 12563 9143614 Bmur_R0040 tRNA Bmur_R0040 NC_014150.1 2952375 2952447 D tRNA-Lys 2952375..2952447 Brachyspira murdochii DSM 12563 9143616 Bmur_R0041 tRNA Bmur_R0041 NC_014150.1 2952480 2952552 D tRNA-Glu 2952480..2952552 Brachyspira murdochii DSM 12563 9143617 Bmur_R0017 rRNA Bmur_R0017 NC_014150.1 1245496 1245611 R 5S ribosomal RNA complement(1245496..1245611) Brachyspira murdochii DSM 12563 9142045 Bmur_R0018 rRNA Bmur_R0018 NC_014150.1 1245733 1248720 R 23S ribosomal RNA complement(1245733..1248720) Brachyspira murdochii DSM 12563 9142046 Bmur_R0028 rRNA Bmur_R0028 NC_014150.1 1912474 1913976 D 16S ribosomal RNA 1912474..1913976 Brachyspira murdochii DSM 12563 9142653