-- dump date 20140619_005145 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003632311.1 296125059 9143862 132..1511 1 NC_014150.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bhy:BHWA1_00217 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosome replication initiator DnaA 1511 9143862 Bmur_0001 Brachyspira murdochii DSM 12563 chromosome replication initiator DnaA YP_003632311.1 132 D 526224 CDS YP_003632312.1 296125060 9140969 2051..2671 1 NC_014150.1 PFAM: GrpE protein; KEGG: bhy:BHWA1_00218 protein GrpE (HSP-70 cofactor); heat shock protein GrpE 2671 9140969 Bmur_0002 Brachyspira murdochii DSM 12563 heat shock protein GrpE YP_003632312.1 2051 D 526224 CDS YP_003632313.1 296125061 9140970 2693..2902 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2902 9140970 Bmur_0003 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632313.1 2693 D 526224 CDS YP_003632314.1 296125062 9140971 2992..4908 1 NC_014150.1 KEGG: bhy:BHWA1_00219 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 4908 9140971 Bmur_0004 Brachyspira murdochii DSM 12563 molecular chaperone DnaK YP_003632314.1 2992 D 526224 CDS YP_003632315.1 296125063 9140972 5123..5455 1 NC_014150.1 PFAM: ankyrin; KEGG: ankyrin repeat protein; ankyrin 5455 9140972 Bmur_0005 Brachyspira murdochii DSM 12563 ankyrin YP_003632315.1 5123 D 526224 CDS YP_003632316.1 296125064 9140973 5465..6406 1 NC_014150.1 KEGG: bhy:BHWA1_00853 hypothetical protein; hypothetical protein 6406 9140973 Bmur_0006 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632316.1 5465 D 526224 CDS YP_003632317.1 296125065 9140974 6556..7248 1 NC_014150.1 PFAM: protein of unknown function DUF1275; KEGG: bhy:BHWA1_00222 hypothetical protein; hypothetical protein 7248 9140974 Bmur_0007 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632317.1 6556 D 526224 CDS YP_003632318.1 296125066 9140975 7274..7564 1 NC_014150.1 KEGG: bhy:BHWA1_00223 chaperone protein DnaJ; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; molecular chaperone DnaJ 7564 9140975 Bmur_0008 Brachyspira murdochii DSM 12563 molecular chaperone DnaJ YP_003632318.1 7274 D 526224 CDS YP_003632319.1 296125067 9140976 7604..8734 1 NC_014150.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: bhy:BHWA1_00224 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein; molecular chaperone DnaJ 8734 9140976 Bmur_0009 Brachyspira murdochii DSM 12563 molecular chaperone DnaJ YP_003632319.1 7604 D 526224 CDS YP_003632320.1 296125068 9140977 8859..9899 1 NC_014150.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_00598 ankyrin repeat-containing protein; molecular chaperone GroES 9899 9140977 Bmur_0010 Brachyspira murdochii DSM 12563 molecular chaperone GroES YP_003632320.1 8859 D 526224 CDS YP_003632321.1 296125069 9140978 complement(10288..12345) 1 NC_014150.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; KEGG: bhy:BHWA1_00365 excinuclease ABC, B subunit; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B 12345 9140978 Bmur_0011 Brachyspira murdochii DSM 12563 excinuclease ABC subunit B YP_003632321.1 10288 R 526224 CDS YP_003632322.1 296125070 9140979 complement(12373..13278) 1 NC_014150.1 KEGG: bhy:BHWA1_00366 hypothetical protein; hypothetical protein 13278 9140979 Bmur_0012 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632322.1 12373 R 526224 CDS YP_003632323.1 296125071 9140980 complement(13510..14364) 1 NC_014150.1 PFAM: peptidase M23; KEGG: bhy:BHWA1_00367 peptidase; peptidase M23 14364 9140980 Bmur_0013 Brachyspira murdochii DSM 12563 peptidase M23 YP_003632323.1 13510 R 526224 CDS YP_003632324.1 296125072 9140981 complement(14361..15536) 1 NC_014150.1 KEGG: bhy:BHWA1_00368 hypothetical protein; hypothetical protein 15536 9140981 Bmur_0014 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632324.1 14361 R 526224 CDS YP_003632325.1 296125073 9140982 complement(15593..16780) 1 NC_014150.1 PFAM: peptidase M23; KEGG: bhy:BHWA1_00369 peptidase; peptidase M23 16780 9140982 Bmur_0015 Brachyspira murdochii DSM 12563 peptidase M23 YP_003632325.1 15593 R 526224 CDS YP_003632326.1 296125074 9140983 complement(16832..17521) 1 NC_014150.1 PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; KEGG: bhy:BHWA1_00370 TPR domain-containing protein; hypothetical protein 17521 9140983 Bmur_0016 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632326.1 16832 R 526224 CDS YP_003632327.1 296125075 9140985 17875..19782 1 NC_014150.1 KEGG: bhy:BHWA1_00744 penicillin-binding protein 3; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; peptidoglycan glycosyltransferase 19782 9140985 Bmur_0017 Brachyspira murdochii DSM 12563 peptidoglycan glycosyltransferase YP_003632327.1 17875 D 526224 CDS YP_003632328.1 296125076 9140986 19804..20706 1 NC_014150.1 PFAM: PfkB domain protein; KEGG: bhy:BHWA1_00743 carbohydrate kinase, PfkB family; PfkB domain-containing protein 20706 9140986 Bmur_0018 Brachyspira murdochii DSM 12563 PfkB domain-containing protein YP_003632328.1 19804 D 526224 CDS YP_003632329.1 296125077 9140987 complement(20711..21265) 1 NC_014150.1 KEGG: bhy:BHWA1_00742 hypothetical protein; hypothetical protein 21265 9140987 Bmur_0019 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632329.1 20711 R 526224 CDS YP_003632330.1 296125078 9140988 complement(21293..22465) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00741 hypothetical protein; hypothetical protein 22465 9140988 Bmur_0020 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632330.1 21293 R 526224 CDS YP_003632331.1 296125079 9140989 complement(22492..23142) 1 NC_014150.1 PFAM: protein of unknown function DUF151; UvrB/UvrC protein; KEGG: bhy:BHWA1_00740 hypothetical protein; hypothetical protein 23142 9140989 Bmur_0021 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632331.1 22492 R 526224 CDS YP_003632332.1 296125080 9140990 23339..25096 1 NC_014150.1 KEGG: bhy:BHWA1_00739 hypothetical protein; hypothetical protein 25096 9140990 Bmur_0022 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632332.1 23339 D 526224 CDS YP_003632333.1 296125081 9140991 25083..27134 1 NC_014150.1 KEGG: bhy:BHWA1_00738 hypothetical protein; hypothetical protein 27134 9140991 Bmur_0023 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632333.1 25083 D 526224 CDS YP_003632334.1 296125082 9140992 complement(27314..29854) 1 NC_014150.1 SMART: helicase c2; DEAD-like helicase; KEGG: bhy:BHWA1_00600 helicase; helicase c2 29854 9140992 Bmur_0024 Brachyspira murdochii DSM 12563 helicase c2 YP_003632334.1 27314 R 526224 CDS YP_003632335.1 296125083 9140993 30283..31614 1 NC_014150.1 KEGG: ppd:Ppro_0172 ATPase central domain- containing protein; PFAM: ATPase AAA; SMART: AAA ATPase; ATPase AAA 31614 9140993 Bmur_0025 Brachyspira murdochii DSM 12563 ATPase AAA YP_003632335.1 30283 D 526224 CDS YP_003632336.1 296125084 9140994 31657..32154 1 NC_014150.1 KEGG: viral A-type inclusion protein; hypothetical protein 32154 9140994 Bmur_0026 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632336.1 31657 D 526224 CDS YP_003632337.1 296125085 9140995 32171..32500 1 NC_014150.1 KEGG: cbh:CLC_1106 hypothetical protein; hypothetical protein 32500 9140995 Bmur_0027 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632337.1 32171 D 526224 CDS YP_003632338.1 296125086 9140996 32513..32899 1 NC_014150.1 KEGG: cysteinyl-tRNA synthetase; hypothetical protein 32899 9140996 Bmur_0028 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632338.1 32513 D 526224 CDS YP_003632339.1 296125087 9140997 32902..33447 1 NC_014150.1 KEGG: cbt:CLH_2831 hypothetical protein; hypothetical protein 33447 9140997 Bmur_0029 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632339.1 32902 D 526224 CDS YP_003632340.1 296125088 9140998 33457..33870 1 NC_014150.1 KEGG: kinase domain containing protein; hypothetical protein 33870 9140998 Bmur_0030 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632340.1 33457 D 526224 CDS YP_003632341.1 296125089 9140999 33890..34120 1 NC_014150.1 KEGG: similar to cytochrome C-type biogenesis protein CCMF; hypothetical protein 34120 9140999 Bmur_0031 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632341.1 33890 D 526224 CDS YP_003632342.1 296125090 9141000 complement(34156..35343) 1 NC_014150.1 KEGG: bhy:BHWA1_00588 enzyme of poly-gamma- glutamate biosynthesis (capsule formation)-like protein; PFAM: capsule synthesis protein, CapA; SMART: capsule synthesis protein, CapA; capsule synthesis protein, CapA 35343 9141000 Bmur_0032 Brachyspira murdochii DSM 12563 capsule synthesis protein, CapA YP_003632342.1 34156 R 526224 CDS YP_003632343.1 296125091 9141001 complement(35394..36797) 1 NC_014150.1 KEGG: bhy:BHWA1_00587 hemolysin protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; hypothetical protein 36797 9141001 Bmur_0033 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632343.1 35394 R 526224 CDS YP_003632344.1 296125092 9141002 complement(36816..37502) 1 NC_014150.1 PFAM: N-acetylmuramoyl-L-alanine amidase 2; KEGG: bhy:BHWA1_00586 hypothetical protein; N-acetylmuramoyl-L-alanine amidase 37502 9141002 Bmur_0034 Brachyspira murdochii DSM 12563 N-acetylmuramoyl-L-alanine amidase YP_003632344.1 36816 R 526224 CDS YP_003632345.1 296125093 9141003 complement(37514..37990) 1 NC_014150.1 PFAM: CheC domain protein; KEGG: bhy:BHWA1_00585 chemotaxis protein CheX; chemotaxis protein CheC 37990 9141003 Bmur_0035 Brachyspira murdochii DSM 12563 chemotaxis protein CheC YP_003632345.1 37514 R 526224 CDS YP_003632346.1 296125094 9141004 38394..42116 1 NC_014150.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; KEGG: bhy:BHWA1_00584 DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 42116 9141004 Bmur_0036 Brachyspira murdochii DSM 12563 DNA polymerase III subunit alpha YP_003632346.1 38394 D 526224 CDS YP_003632347.1 296125095 9141005 complement(42485..43477) 1 NC_014150.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: bhy:BHWA1_00449 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 43477 9141005 Bmur_0037 Brachyspira murdochii DSM 12563 tryptophanyl-tRNA synthetase YP_003632347.1 42485 R 526224 CDS YP_003632348.1 296125096 9141006 complement(43554..44540) 1 NC_014150.1 PFAM: PSP1 domain protein; KEGG: bhy:BHWA1_00448 PSP1; PSP1 domain-containing protein 44540 9141006 Bmur_0038 Brachyspira murdochii DSM 12563 PSP1 domain-containing protein YP_003632348.1 43554 R 526224 CDS YP_003632349.1 296125097 9141007 44709..45326 1 NC_014150.1 KEGG: bhy:BHWA1_00447 hypothetical protein; hypothetical protein 45326 9141007 Bmur_0039 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632349.1 44709 D 526224 CDS YP_003632350.1 296125098 9141008 complement(45323..48019) 1 NC_014150.1 KEGG: bhy:BHWA1_00756 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 48019 9141008 Bmur_0040 Brachyspira murdochii DSM 12563 lipoprotein YP_003632350.1 45323 R 526224 CDS YP_003632351.1 296125099 9141009 complement(48182..49216) 1 NC_014150.1 KEGG: bhy:BHWA1_00044 hypothetical protein; hypothetical protein 49216 9141009 Bmur_0041 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632351.1 48182 R 526224 CDS YP_003632352.1 296125100 9141010 49737..50429 1 NC_014150.1 KEGG: bhy:BHWA1_00446 hemolysin III TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; hemolysin III family channel protein 50429 9141010 Bmur_0042 Brachyspira murdochii DSM 12563 hemolysin III family channel protein YP_003632352.1 49737 D 526224 CDS YP_003632353.1 296125101 9141011 50511..51551 1 NC_014150.1 KEGG: bhy:BHWA1_00445 rhodanese-like domain protein; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; tRNA 2-selenouridine synthase 51551 9141011 Bmur_0043 Brachyspira murdochii DSM 12563 tRNA 2-selenouridine synthase YP_003632353.1 50511 D 526224 CDS YP_003632354.1 296125102 9141012 51576..53417 1 NC_014150.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: bhy:BHWA1_00124 excinuclease ABC, C subunit; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 53417 9141012 Bmur_0044 Brachyspira murdochii DSM 12563 excinuclease ABC subunit C YP_003632354.1 51576 D 526224 CDS YP_003632355.1 296125103 9141013 complement(53433..54557) 1 NC_014150.1 PFAM: Radical SAM domain protein; KEGG: bhy:BHWA1_00125 arylsulfatase regulator; radical SAM protein 54557 9141013 Bmur_0045 Brachyspira murdochii DSM 12563 radical SAM protein YP_003632355.1 53433 R 526224 CDS YP_003632356.1 296125104 9141014 54735..55670 1 NC_014150.1 KEGG: bhy:BHWA1_00127 hypothetical protein; hypothetical protein 55670 9141014 Bmur_0046 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632356.1 54735 D 526224 CDS YP_003632357.1 296125105 9141015 55955..57307 1 NC_014150.1 PFAM: nucleoside recognition domain protein; KEGG: bhy:BHWA1_00129 hypothetical protein; nucleoside recognition domain-containing protein 57307 9141015 Bmur_0047 Brachyspira murdochii DSM 12563 nucleoside recognition domain-containing protein YP_003632357.1 55955 D 526224 CDS YP_003632358.1 296125106 9141016 57332..58126 1 NC_014150.1 KEGG: bhy:BHWA1_00130 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family 58126 9141016 Bmur_0048 Brachyspira murdochii DSM 12563 phenazine biosynthesis protein PhzF family YP_003632358.1 57332 D 526224 CDS YP_003632359.1 296125107 9141017 58200..58994 1 NC_014150.1 KEGG: bhy:BHWA1_00131 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 58994 9141017 Bmur_0049 Brachyspira murdochii DSM 12563 hydroxyethylthiazole kinase YP_003632359.1 58200 D 526224 CDS YP_003632360.1 296125108 9141018 complement(59123..60061) 1 NC_014150.1 PFAM: bile acid:sodium symporter; KEGG: bhy:BHWA1_00132 transporter; bile acid:sodium symporter 60061 9141018 Bmur_0050 Brachyspira murdochii DSM 12563 bile acid:sodium symporter YP_003632360.1 59123 R 526224 CDS YP_003632361.1 296125109 9141019 complement(60091..61176) 1 NC_014150.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_00133 glycerol dehydrogenase; iron-containing alcohol dehydrogenase 61176 9141019 Bmur_0051 Brachyspira murdochii DSM 12563 iron-containing alcohol dehydrogenase YP_003632361.1 60091 R 526224 CDS YP_003632362.1 296125110 9141020 complement(61499..63181) 1 NC_014150.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: bhy:BHWA1_00134 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 63181 9141020 Bmur_0052 Brachyspira murdochii DSM 12563 dihydroxy-acid dehydratase YP_003632362.1 61499 R 526224 CDS YP_003632363.1 296125111 9141021 63483..65420 1 NC_014150.1 KEGG: bhy:BHWA1_00135 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 65420 9141021 Bmur_0053 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003632363.1 63483 D 526224 CDS YP_003632364.1 296125112 9141022 complement(65487..67364) 1 NC_014150.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bhy:BHWA1_00552 long-chain acyl-CoA synthetases (AMP-forming); AMP-dependent synthetase/ligase 67364 9141022 Bmur_0054 Brachyspira murdochii DSM 12563 AMP-dependent synthetase/ligase YP_003632364.1 65487 R 526224 CDS YP_003632365.1 296125113 9141023 complement(67439..68569) 1 NC_014150.1 PFAM: glycosyl transferase group 1; KEGG: bhy:BHWA1_00551 mannosyltransferase; group 1 glycosyl transferase 68569 9141023 Bmur_0055 Brachyspira murdochii DSM 12563 group 1 glycosyl transferase YP_003632365.1 67439 R 526224 CDS YP_003632366.1 296125114 9141024 68688..69641 1 NC_014150.1 KEGG: cpy:Cphy_3193 esterase; esterase 69641 9141024 Bmur_0056 Brachyspira murdochii DSM 12563 esterase YP_003632366.1 68688 D 526224 CDS YP_003632367.1 296125115 9141025 70115..71041 1 NC_014150.1 KEGG: efe:EFER_2124 hypothetical protein; hypothetical protein 71041 9141025 Bmur_0057 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632367.1 70115 D 526224 CDS YP_003632368.1 296125116 9141026 complement(71046..71657) 1 NC_014150.1 KEGG: bhy:BHWA1_00374 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 71657 9141026 Bmur_0058 Brachyspira murdochii DSM 12563 HAD-superfamily hydrolase YP_003632368.1 71046 R 526224 CDS YP_003632369.1 296125117 9141027 72127..73713 1 NC_014150.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bhy:BHWA1_00375 pyrrolo-quinoline quinone; ATPase AAA 73713 9141027 Bmur_0059 Brachyspira murdochii DSM 12563 ATPase AAA YP_003632369.1 72127 D 526224 CDS YP_003632370.1 296125118 9141028 73700..75136 1 NC_014150.1 SMART: von Willebrand factor type A; KEGG: bhy:BHWA1_00376 von Willebrand factor type A (vWA) domain containing protein; von Willebrand factor A 75136 9141028 Bmur_0060 Brachyspira murdochii DSM 12563 von Willebrand factor A YP_003632370.1 73700 D 526224 CDS YP_003632371.1 296125119 9141029 complement(75141..75968) 1 NC_014150.1 TIGRFAM: glutamate racemase; KEGG: bhy:BHWA1_00378 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 75968 9141029 Bmur_0061 Brachyspira murdochii DSM 12563 glutamate racemase YP_003632371.1 75141 R 526224 CDS YP_003632372.1 296125120 9141030 76145..76393 1 NC_014150.1 KEGG: bhy:BHWA1_00379 hypothetical protein; TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; sodium pump decarboxylase, gamma subunit 76393 9141030 Bmur_0062 Brachyspira murdochii DSM 12563 sodium pump decarboxylase, gamma subunit YP_003632372.1 76145 D 526224 CDS YP_003632373.1 296125121 9141031 76421..78232 1 NC_014150.1 KEGG: bhy:BHWA1_00380 biotin/lipoyl attachment domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; pyruvate carboxylase 78232 9141031 Bmur_0063 Brachyspira murdochii DSM 12563 pyruvate carboxylase YP_003632373.1 76421 D 526224 CDS YP_003632374.1 296125122 9141032 78264..79640 1 NC_014150.1 TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; KEGG: bhy:BHWA1_00381 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl- CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 79640 9141032 Bmur_0064 Brachyspira murdochii DSM 12563 sodium ion-translocating decarboxylase subunit beta YP_003632374.1 78264 D 526224 CDS YP_003632375.1 296125123 9141033 79933..80871 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: pdi:BDI_1651 glycosyl transferase; glycosyl transferase 80871 9141033 Bmur_0065 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632375.1 79933 D 526224 CDS YP_003632376.1 296125124 9141034 80861..82399 1 NC_014150.1 PFAM: glycosyl transferase 39; KEGG: tye:THEYE_A0589 hypothetical protein; glycosyl transferase 82399 9141034 Bmur_0066 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632376.1 80861 D 526224 CDS YP_003632377.1 296125125 9141035 complement(82452..83408) 1 NC_014150.1 PFAM: Uncharacterised conserved protein UCP018688; KEGG: bhy:BHWA1_00382 hypothetical protein; hypothetical protein 83408 9141035 Bmur_0067 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632377.1 82452 R 526224 CDS YP_003632378.1 296125126 9141037 84149..84481 1 NC_014150.1 PFAM: helix-turn-helix HxlR type; KEGG: bhy:BHWA1_00384 transcriptional regulator; HxlR family transcriptional regulator 84481 9141037 Bmur_0069 Brachyspira murdochii DSM 12563 HxlR family transcriptional regulator YP_003632378.1 84149 D 526224 CDS YP_003632379.1 296125127 9141038 complement(84482..85015) 1 NC_014150.1 KEGG: bhy:BHWA1_00385 hypothetical protein; hypothetical protein 85015 9141038 Bmur_0070 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632379.1 84482 R 526224 CDS YP_003632380.1 296125128 9141039 complement(85015..86322) 1 NC_014150.1 PFAM: protein of unknown function UPF0118; KEGG: bhy:BHWA1_00386 PerM, predicted permease; hypothetical protein 86322 9141039 Bmur_0071 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632380.1 85015 R 526224 CDS YP_003632381.1 296125129 9141042 86751..87104 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00390 ankyrin repeat-containing protein; ankyrin 87104 9141042 Bmur_0072 Brachyspira murdochii DSM 12563 ankyrin YP_003632381.1 86751 D 526224 CDS YP_003632382.1 296125130 9141043 complement(87107..88867) 1 NC_014150.1 KEGG: bhy:BHWA1_00391 hypothetical protein; hypothetical protein 88867 9141043 Bmur_0073 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632382.1 87107 R 526224 CDS YP_003632383.1 296125131 9141044 complement(89287..92457) 1 NC_014150.1 PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_00506 acriflavin resistance protein; acriflavin resistance protein 92457 9141044 Bmur_0074 Brachyspira murdochii DSM 12563 acriflavin resistance protein YP_003632383.1 89287 R 526224 CDS YP_003632384.1 296125132 9141045 complement(92531..94036) 1 NC_014150.1 KEGG: bhy:BHWA1_00505 outer membrane component of multidrug efflux; outer membrane component of multidrug efflux 94036 9141045 Bmur_0075 Brachyspira murdochii DSM 12563 outer membrane component of multidrug efflux YP_003632384.1 92531 R 526224 CDS YP_003632385.1 296125133 9141046 94259..94966 1 NC_014150.1 TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bhy:BHWA1_00504 trehalose operon repressor; SMART: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; GntR family transcriptional regulator 94966 9141046 Bmur_0076 Brachyspira murdochii DSM 12563 GntR family transcriptional regulator YP_003632385.1 94259 D 526224 CDS YP_003632386.1 296125134 9141047 95160..97091 1 NC_014150.1 KEGG: bhy:BHWA1_00503 trehalose PTS system, IIABC component; TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIB/cysteine, phosphorylation site; phosphotransferase system EIIC; PTS system trehalose-specific transporter subunit IIBC 97091 9141047 Bmur_0077 Brachyspira murdochii DSM 12563 PTS system trehalose-specific transporter subunit IIBC YP_003632386.1 95160 D 526224 CDS YP_003632387.1 296125135 9141048 97208..98878 1 NC_014150.1 TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: bhy:BHWA1_00502 trehalose-6-phosphate hydrolase; SMART: alpha amylase catalytic sub domain; alpha,alpha-phosphotrehalase 98878 9141048 Bmur_0078 Brachyspira murdochii DSM 12563 alpha,alpha-phosphotrehalase YP_003632387.1 97208 D 526224 CDS YP_003632388.1 296125136 9141049 99052..99618 1 NC_014150.1 PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_00501 transcriptional regulator, TetR family; TetR family transcriptional regulator 99618 9141049 Bmur_0079 Brachyspira murdochii DSM 12563 TetR family transcriptional regulator YP_003632388.1 99052 D 526224 CDS YP_003632389.1 296125137 9141050 99722..100723 1 NC_014150.1 KEGG: bhy:BHWA1_00500 glycerol-3-phosphate dehydrogenase (D(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; glycerol-3-phosphate dehydrogenase 100723 9141050 Bmur_0080 Brachyspira murdochii DSM 12563 glycerol-3-phosphate dehydrogenase YP_003632389.1 99722 D 526224 CDS YP_003632390.1 296125138 9141051 complement(100724..101131) 1 NC_014150.1 KEGG: bhy:BHWA1_00499 hypothetical protein; hypothetical protein 101131 9141051 Bmur_0081 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632390.1 100724 R 526224 CDS YP_003632391.1 296125139 9141052 101250..102308 1 NC_014150.1 PFAM: protein of unknown function DUF1385; KEGG: bhy:BHWA1_00498 predicted metal-dependent enzyme; hypothetical protein 102308 9141052 Bmur_0082 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632391.1 101250 D 526224 CDS YP_003632392.1 296125140 9141053 102299..103426 1 NC_014150.1 KEGG: bhy:BHWA1_00497 hypothetical protein; hypothetical protein 103426 9141053 Bmur_0083 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632392.1 102299 D 526224 CDS YP_003632393.1 296125141 9141054 103426..104454 1 NC_014150.1 KEGG: bhy:BHWA1_00496 transcriptional regulator; transcriptional regulator 104454 9141054 Bmur_0084 Brachyspira murdochii DSM 12563 transcriptional regulator YP_003632393.1 103426 D 526224 CDS YP_003632394.1 296125142 9141055 complement(104532..106619) 1 NC_014150.1 PFAM: glutamine synthetase catalytic region; KEGG: bhy:BHWA1_00495 glutamine synthetase; glutamine synthetase 106619 9141055 Bmur_0085 Brachyspira murdochii DSM 12563 glutamine synthetase YP_003632394.1 104532 R 526224 CDS YP_003632395.1 296125143 9141056 complement(106753..107571) 1 NC_014150.1 KEGG: bhy:BHWA1_00494 hypothetical protein; hypothetical protein 107571 9141056 Bmur_0086 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632395.1 106753 R 526224 CDS YP_003632396.1 296125144 9141057 complement(107576..108709) 1 NC_014150.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: bhy:BHWA1_00493 response regulator receiver modulated CheB methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 108709 9141057 Bmur_0087 Brachyspira murdochii DSM 12563 response regulator receiver modulated CheB methylesterase YP_003632396.1 107576 R 526224 CDS YP_003632397.1 296125145 9141058 complement(108737..109330) 1 NC_014150.1 PFAM: CheD family protein; KEGG: bhy:BHWA1_00492 chemotaxis protein CheD; stimulates methylation of MCP proteins; chemotaxis protein CheD 109330 9141058 Bmur_0088 Brachyspira murdochii DSM 12563 chemotaxis protein CheD YP_003632397.1 108737 R 526224 CDS YP_003632398.1 296125146 9141059 complement(109346..110197) 1 NC_014150.1 PFAM: MCP methyltransferase CheR-type; KEGG: bhy:BHWA1_00491 chemotaxis protein methyltransferase CheR; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 110197 9141059 Bmur_0089 Brachyspira murdochii DSM 12563 chemotaxis protein CheR YP_003632398.1 109346 R 526224 CDS YP_003632399.1 296125147 9141060 complement(110220..110750) 1 NC_014150.1 KEGG: bhy:BHWA1_00490 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; chemotaxis protein CheW 110750 9141060 Bmur_0090 Brachyspira murdochii DSM 12563 chemotaxis protein CheW YP_003632399.1 110220 R 526224 CDS YP_003632400.1 296125148 9141061 complement(110762..112870) 1 NC_014150.1 KEGG: bhy:BHWA1_00489 chemotaxis histidine kinase CheA; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; CheA signal transduction histidine kinase 112870 9141061 Bmur_0091 Brachyspira murdochii DSM 12563 CheA signal transduction histidine kinase YP_003632400.1 110762 R 526224 CDS YP_003632401.1 296125149 9141062 complement(112930..113298) 1 NC_014150.1 KEGG: bhy:BHWA1_00488 chemotaxis response regulator CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 113298 9141062 Bmur_0092 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003632401.1 112930 R 526224 CDS YP_003632402.1 296125150 9141063 complement(113318..113581) 1 NC_014150.1 KEGG: bhy:BHWA1_00487 anti-sigma-factor antagonist; anti-sigma-factor antagonist 113581 9141063 Bmur_0093 Brachyspira murdochii DSM 12563 anti-sigma-factor antagonist YP_003632402.1 113318 R 526224 CDS YP_003632403.1 296125151 9141064 complement(113606..115537) 1 NC_014150.1 KEGG: bhy:BHWA1_00486 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 115537 9141064 Bmur_0094 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003632403.1 113606 R 526224 CDS YP_003632404.1 296125152 9141065 complement(115850..117742) 1 NC_014150.1 KEGG: bhy:BHWA1_00485 D+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 117742 9141065 Bmur_0095 Brachyspira murdochii DSM 12563 NAD+ synthetase YP_003632404.1 115850 R 526224 CDS YP_003632405.1 296125153 9141066 117889..118476 1 NC_014150.1 KEGG: bhy:BHWA1_00484 predicted flavin-nucleotide- binding protein; flavin-nucleotide-binding protein 118476 9141066 Bmur_0096 Brachyspira murdochii DSM 12563 flavin-nucleotide-binding protein YP_003632405.1 117889 D 526224 CDS YP_003632406.1 296125154 9141067 118593..119582 1 NC_014150.1 KEGG: bhy:BHWA1_00483 cAMP-binding protein; PFAM: cyclic nucleotide-binding; TPR repeat- containing protein; SMART: cyclic nucleotide-binding; Tetratricopeptide repeat; Crp/Fnr family transcriptional regulator 119582 9141067 Bmur_0097 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003632406.1 118593 D 526224 CDS YP_003632407.1 296125155 9141068 119604..120239 1 NC_014150.1 KEGG: bhy:BHWA1_00482 cAMP-dependent protein kinase regulatory chain; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 120239 9141068 Bmur_0098 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003632407.1 119604 D 526224 CDS YP_003632408.1 296125156 9141069 120390..121082 1 NC_014150.1 KEGG: bhy:BHWA1_00481 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 121082 9141069 Bmur_0099 Brachyspira murdochii DSM 12563 ankyrin YP_003632408.1 120390 D 526224 CDS YP_003632409.1 296125157 9141071 complement(122051..123331) 1 NC_014150.1 KEGG: bhy:BHWA1_00478 hypothetical protein; hypothetical protein 123331 9141071 Bmur_0101 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632409.1 122051 R 526224 CDS YP_003632410.1 296125158 9141072 complement(123376..125004) 1 NC_014150.1 PFAM: ABC-type uncharacterised transport system; KEGG: bhy:BHWA1_00477 ABC transporter; ABC transporter 125004 9141072 Bmur_0102 Brachyspira murdochii DSM 12563 ABC transporter YP_003632410.1 123376 R 526224 CDS YP_003632411.1 296125159 9141073 125290..126444 1 NC_014150.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: bhy:BHWA1_00476 1-deoxy-D-xylulose-5- phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 126444 9141073 Bmur_0103 Brachyspira murdochii DSM 12563 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003632411.1 125290 D 526224 CDS YP_003632412.1 296125160 9141074 126528..128264 1 NC_014150.1 TIGRFAM: prolyl-tRNA synthetase; KEGG: bhy:BHWA1_00474 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon- binding domain protein; prolyl-tRNA synthetase 128264 9141074 Bmur_0104 Brachyspira murdochii DSM 12563 prolyl-tRNA synthetase YP_003632412.1 126528 D 526224 CDS YP_003632413.1 296125161 9141075 128337..128774 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00473 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 128774 9141075 Bmur_0105 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003632413.1 128337 D 526224 CDS YP_003632414.1 296125162 9141076 complement(128780..129850) 1 NC_014150.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bhy:BHWA1_00472 permease; YjgP/YjgQ family permease 129850 9141076 Bmur_0106 Brachyspira murdochii DSM 12563 YjgP/YjgQ family permease YP_003632414.1 128780 R 526224 CDS YP_003632415.1 296125163 9141077 complement(129850..130731) 1 NC_014150.1 PFAM: Protein of unknown function DUF2225; KEGG: bhy:BHWA1_00471 hypothetical protein; hypothetical protein 130731 9141077 Bmur_0107 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632415.1 129850 R 526224 CDS YP_003632416.1 296125164 9141078 complement(130801..131931) 1 NC_014150.1 KEGG: bhy:BHWA1_00470 hypothetical protein; hypothetical protein 131931 9141078 Bmur_0108 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632416.1 130801 R 526224 CDS YP_003632417.1 296125165 9141079 complement(131906..133441) 1 NC_014150.1 KEGG: bhy:BHWA1_00469 N-acetylglucosamine-1- phosphate uridyltransferase; PFAM: transferase hexapeptide repeat containing protein; glucosamine-1-phosphate N-acetyltransferase 133441 9141079 Bmur_0109 Brachyspira murdochii DSM 12563 glucosamine-1-phosphate N-acetyltransferase YP_003632417.1 131906 R 526224 CDS YP_003632418.1 296125166 9141080 complement(133452..133991) 1 NC_014150.1 KEGG: bhy:BHWA1_00468 hypothetical protein; hypothetical protein 133991 9141080 Bmur_0110 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632418.1 133452 R 526224 CDS YP_003632419.1 296125167 9141081 complement(134096..135490) 1 NC_014150.1 KEGG: bhy:BHWA1_00467 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 135490 9141081 Bmur_0111 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003632419.1 134096 R 526224 CDS YP_003632420.1 296125168 9141082 135616..136536 1 NC_014150.1 PFAM: methylenetetrahydrofolate reductase; KEGG: bhy:BHWA1_00466 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 136536 9141082 Bmur_0112 Brachyspira murdochii DSM 12563 methylenetetrahydrofolate reductase YP_003632420.1 135616 D 526224 CDS YP_003632421.1 296125169 9141083 136898..137245 1 NC_014150.1 KEGG: smu:SMU.987 cell wall-associated protein precursor WapA; hypothetical protein 137245 9141083 Bmur_0113 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632421.1 136898 D 526224 CDS YP_003632422.1 296125170 9141084 137315..138322 1 NC_014150.1 KEGG: cts:Ctha_1248 hypothetical protein; hypothetical protein 138322 9141084 Bmur_0114 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632422.1 137315 D 526224 CDS YP_003632423.1 296125171 9141085 138338..138922 1 NC_014150.1 KEGG: tde:TDE0731 hypothetical protein; hypothetical protein 138922 9141085 Bmur_0115 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632423.1 138338 D 526224 CDS YP_003632424.1 296125172 9141086 138937..139914 1 NC_014150.1 KEGG: asa:ASA_3240 hypothetical protein; hypothetical protein 139914 9141086 Bmur_0116 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632424.1 138937 D 526224 CDS YP_003632425.1 296125173 9141089 144133..145440 1 NC_014150.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bhy:BHWA1_02543 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 145440 9141089 Bmur_0119 Brachyspira murdochii DSM 12563 nucleotide sugar dehydrogenase YP_003632425.1 144133 D 526224 CDS YP_003632426.1 296125174 9141090 complement(145561..147420) 1 NC_014150.1 PFAM: methyltransferase type 12; KEGG: eel:EUBELI_00268 hypothetical protein; methyltransferase type 12 147420 9141090 Bmur_0120 Brachyspira murdochii DSM 12563 methyltransferase type 12 YP_003632426.1 145561 R 526224 CDS YP_003632427.1 296125175 9141091 complement(147579..148964) 1 NC_014150.1 KEGG: hba:Hbal_2322 glycosyl transferase 2; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 148964 9141091 Bmur_0121 Brachyspira murdochii DSM 12563 radical SAM protein YP_003632427.1 147579 R 526224 CDS YP_003632428.1 296125176 9141092 complement(148989..150125) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: mst:Msp_0538 glycosyltransferase; glycosyl transferase 150125 9141092 Bmur_0122 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632428.1 148989 R 526224 CDS YP_003632429.1 296125177 9141093 complement(150169..151611) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: ter:Tery_2950 glycosyl transferase; glycosyl transferase 151611 9141093 Bmur_0123 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632429.1 150169 R 526224 CDS YP_003632430.1 296125178 9141094 complement(151604..152641) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bfs:BF2599 LPS biosynthesis related glycosyltransferase; glycosyl transferase 152641 9141094 Bmur_0124 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632430.1 151604 R 526224 CDS YP_003632431.1 296125179 9141095 complement(152638..153660) 1 NC_014150.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: vfi:VF_0186 dTDP-glucose 4,6-dehydratase; NAD-dependent epimerase/dehydratase 153660 9141095 Bmur_0125 Brachyspira murdochii DSM 12563 NAD-dependent epimerase/dehydratase YP_003632431.1 152638 R 526224 CDS YP_003632432.1 296125180 9141096 complement(153710..154957) 1 NC_014150.1 PFAM: methyltransferase type 12; KEGG: sun:SUN_2139 hypothetical protein; methyltransferase type 12 154957 9141096 Bmur_0126 Brachyspira murdochii DSM 12563 methyltransferase type 12 YP_003632432.1 153710 R 526224 CDS YP_003632433.1 296125181 9141097 complement(154968..156749) 1 NC_014150.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: sun:SUN_2140 acetolactate synthase, large subunit; thiamine pyrophosphate TPP binding domain-containing protein 156749 9141097 Bmur_0127 Brachyspira murdochii DSM 12563 thiamine pyrophosphate TPP binding domain-containing protein YP_003632433.1 154968 R 526224 CDS YP_003632434.1 296125182 9141098 complement(156758..157582) 1 NC_014150.1 PFAM: pyruvate carboxyltransferase; KEGG: sun:SUN_2142 hypothetical protein; pyruvate carboxyltransferase 157582 9141098 Bmur_0128 Brachyspira murdochii DSM 12563 pyruvate carboxyltransferase YP_003632434.1 156758 R 526224 CDS YP_003632435.1 296125183 9141099 complement(157582..158889) 1 NC_014150.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ypy:YPK_3189 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 158889 9141099 Bmur_0129 Brachyspira murdochii DSM 12563 DegT/DnrJ/EryC1/StrS aminotransferase YP_003632435.1 157582 R 526224 CDS YP_003632436.1 296125184 9141100 complement(158903..159964) 1 NC_014150.1 KEGG: mae:Maeo_0387 CDP-glucose 4,6-dehydratase; TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; CDP-glucose 4,6-dehydratase 159964 9141100 Bmur_0130 Brachyspira murdochii DSM 12563 CDP-glucose 4,6-dehydratase YP_003632436.1 158903 R 526224 CDS YP_003632437.1 296125185 9141101 complement(159946..160740) 1 NC_014150.1 KEGG: bhy:BHWA1_02683 glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase 160740 9141101 Bmur_0131 Brachyspira murdochii DSM 12563 glucose-1-phosphate cytidylyltransferase YP_003632437.1 159946 R 526224 CDS YP_003632438.1 296125186 9141102 160962..162173 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: tde:TDE1433 glycosyl transferase, group 2 family protein; glycosyl transferase 162173 9141102 Bmur_0132 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632438.1 160962 D 526224 CDS YP_003632439.1 296125187 9141103 162181..163926 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: rco:RC0461 glycosyltransferase; glycosyl transferase 163926 9141103 Bmur_0133 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632439.1 162181 D 526224 CDS YP_003632440.1 296125188 9141104 163923..165044 1 NC_014150.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pmo:Pmob_1284 UDP-N-acetylglucosamine 2- epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 165044 9141104 Bmur_0134 Brachyspira murdochii DSM 12563 UDP-N-acetylglucosamine 2-epimerase YP_003632440.1 163923 D 526224 CDS YP_003632441.1 296125189 9141105 165046..166155 1 NC_014150.1 PFAM: Radical SAM domain protein; KEGG: ret:RHE_CH01520 beta-D-1,6 glucosyltransferase; radical SAM protein 166155 9141105 Bmur_0135 Brachyspira murdochii DSM 12563 radical SAM protein YP_003632441.1 165046 D 526224 CDS YP_003632442.1 296125190 9141106 166145..168385 1 NC_014150.1 PFAM: glycosyl transferase 2; glycosyl transferase group 1; KEGG: rpr:RP336 hypothetical protein; glycosyl transferase 168385 9141106 Bmur_0136 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632442.1 166145 D 526224 CDS YP_003632443.1 296125191 9141107 168382..169212 1 NC_014150.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rms:RMA_0473 dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase 169212 9141107 Bmur_0137 Brachyspira murdochii DSM 12563 NAD-dependent epimerase/dehydratase YP_003632443.1 168382 D 526224 CDS YP_003632444.1 296125192 9141108 169218..170228 1 NC_014150.1 PFAM: polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis domain protein; KEGG: geo:Geob_1458 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 170228 9141108 Bmur_0138 Brachyspira murdochii DSM 12563 polysaccharide biosynthesis protein CapD YP_003632444.1 169218 D 526224 CDS YP_003632445.1 296125193 9141109 170282..171568 1 NC_014150.1 KEGG: cyc:PCC7424_4582 hypothetical protein; hypothetical protein 171568 9141109 Bmur_0139 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632445.1 170282 D 526224 CDS YP_003632446.1 296125194 9141110 171686..174289 1 NC_014150.1 PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ere:EUBREC_2763 MurB family protein; coenzyme F420 hydrogenase 174289 9141110 Bmur_0140 Brachyspira murdochii DSM 12563 coenzyme F420 hydrogenase YP_003632446.1 171686 D 526224 CDS YP_003632447.1 296125195 9141111 174636..175748 1 NC_014150.1 KEGG: bhy:BHWA1_00462 dynein heavy chain; dynein heavy chain 175748 9141111 Bmur_0141 Brachyspira murdochii DSM 12563 dynein heavy chain YP_003632447.1 174636 D 526224 CDS YP_003632448.1 296125196 9141112 complement(175794..177560) 1 NC_014150.1 PFAM: protein of unknown function DUF262; KEGG: ppg:PputGB1_3189 hypothetical protein; hypothetical protein 177560 9141112 Bmur_0142 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632448.1 175794 R 526224 CDS YP_003632449.1 296125197 9141113 complement(177606..183434) 1 NC_014150.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bhy:BHWA1_00461 exinuclease ABC subunit A; SMART: AAA ATPase; excinuclease ABC subunit A 183434 9141113 Bmur_0143 Brachyspira murdochii DSM 12563 excinuclease ABC subunit A YP_003632449.1 177606 R 526224 CDS YP_003632450.1 296125198 9141114 complement(183864..184403) 1 NC_014150.1 PFAM: transcriptional regulator PadR family protein; transcriptional regulator PadR-like; KEGG: cdl:CDR20291_2964 transcriptional regulator, PadR-like family; transcriptional regulator, PadR-like family; PadR family transcriptional regulator 184403 9141114 Bmur_0144 Brachyspira murdochii DSM 12563 PadR family transcriptional regulator YP_003632450.1 183864 R 526224 CDS YP_003632451.1 296125199 9141115 185031..185342 1 NC_014150.1 KEGG: bhy:BHWA1_00458 phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 185342 9141115 Bmur_0145 Brachyspira murdochii DSM 12563 phosphotransferase system, phosphocarrier protein HPr YP_003632451.1 185031 D 526224 CDS YP_003632452.1 296125200 9141116 185396..186778 1 NC_014150.1 PFAM: gluconate transporter; KEGG: bhy:BHWA1_00457 gluconate transporter; gluconate transporter 186778 9141116 Bmur_0146 Brachyspira murdochii DSM 12563 gluconate transporter YP_003632452.1 185396 D 526224 CDS YP_003632453.1 296125201 9141117 186853..187287 1 NC_014150.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: bhy:BHWA1_00456 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 187287 9141117 Bmur_0147 Brachyspira murdochii DSM 12563 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_003632453.1 186853 D 526224 CDS YP_003632454.1 296125202 9141118 187326..188141 1 NC_014150.1 KEGG: bhy:BHWA1_00455 hypothetical protein; hypothetical protein 188141 9141118 Bmur_0148 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632454.1 187326 D 526224 CDS YP_003632455.1 296125203 9141119 188145..188891 1 NC_014150.1 KEGG: bhy:BHWA1_00454 hypothetical protein; hypothetical protein 188891 9141119 Bmur_0149 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632455.1 188145 D 526224 CDS YP_003632456.1 296125204 9141120 complement(189193..212172) 1 NC_014150.1 PFAM: apolipoprotein A1/A4/E; RepA / Rep KID repeat- containing protein; KEGG: bhy:BHWA1_00453 hypothetical protein; apolipoprotein A1/A4/E 212172 9141120 Bmur_0150 Brachyspira murdochii DSM 12563 apolipoprotein A1/A4/E YP_003632456.1 189193 R 526224 CDS YP_003632457.1 296125205 9141121 212802..214223 1 NC_014150.1 PFAM: sulfatase; KEGG: bhy:BHWA1_00429 sulfatase; sulfatase 214223 9141121 Bmur_0151 Brachyspira murdochii DSM 12563 sulfatase YP_003632457.1 212802 D 526224 CDS YP_003632458.1 296125206 9141122 214265..215308 1 NC_014150.1 PFAM: extracellular solute-binding protein family 3; KEGG: bhy:BHWA1_00430 ABC transporter periplasmic binding protein; ABC transporter substrate-binding protein 215308 9141122 Bmur_0152 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003632458.1 214265 D 526224 CDS YP_003632459.1 296125207 9141123 215342..216175 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00431 ABC-type nitrate/sulfonate/bicarbonate transport system, permease componen; nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein 216175 9141123 Bmur_0153 Brachyspira murdochii DSM 12563 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_003632459.1 215342 D 526224 CDS YP_003632460.1 296125208 9141124 216188..216982 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00432 ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, permease component; nitrate/sulfonate/bicarbonate ABC transporter permease 216982 9141124 Bmur_0154 Brachyspira murdochii DSM 12563 nitrate/sulfonate/bicarbonate ABC transporter permease YP_003632460.1 216188 D 526224 CDS YP_003632461.1 296125209 9141125 217002..217760 1 NC_014150.1 KEGG: bhy:BHWA1_00433 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 217760 9141125 Bmur_0155 Brachyspira murdochii DSM 12563 ABC transporter YP_003632461.1 217002 D 526224 CDS YP_003632462.1 296125210 9141126 217780..218532 1 NC_014150.1 KEGG: bhy:BHWA1_00434 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 218532 9141126 Bmur_0156 Brachyspira murdochii DSM 12563 ABC transporter YP_003632462.1 217780 D 526224 CDS YP_003632463.1 296125211 9141127 complement(218578..219612) 1 NC_014150.1 KEGG: bhy:BHWA1_00435 transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 219612 9141127 Bmur_0157 Brachyspira murdochii DSM 12563 LacI family transcriptional regulator YP_003632463.1 218578 R 526224 CDS YP_003632464.1 296125212 9141128 220558..221085 1 NC_014150.1 KEGG: bhy:BHWA1_00440 hypothetical protein; hypothetical protein 221085 9141128 Bmur_0158 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632464.1 220558 D 526224 CDS YP_003632465.1 296125213 9141129 complement(221627..222322) 1 NC_014150.1 PFAM: alanine racemase domain protein; KEGG: bhy:BHWA1_00441 hypothetical protein; alanine racemase 222322 9141129 Bmur_0159 Brachyspira murdochii DSM 12563 alanine racemase YP_003632465.1 221627 R 526224 CDS YP_003632466.1 296125214 9141130 222774..223241 1 NC_014150.1 PFAM: protein of unknown function DUF327; KEGG: bhy:BHWA1_00442 hypothetical protein; hypothetical protein 223241 9141130 Bmur_0160 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632466.1 222774 D 526224 CDS YP_003632467.1 296125215 9141131 223238..223918 1 NC_014150.1 PFAM: peptidase M22 glycoprotease; KEGG: bhy:BHWA1_00443 inactive metal-dependent protease, molecular chaperone; peptidase M22 glycoprotease 223918 9141131 Bmur_0161 Brachyspira murdochii DSM 12563 peptidase M22 glycoprotease YP_003632467.1 223238 D 526224 CDS YP_003632468.1 296125216 9141132 224065..226203 1 NC_014150.1 KEGG: bhy:BHWA1_00444 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 226203 9141132 Bmur_0162 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003632468.1 224065 D 526224 CDS YP_003632469.1 296125217 9141133 complement(226255..227325) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00173 TPR domain-containing protein; hypothetical protein 227325 9141133 Bmur_0163 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632469.1 226255 R 526224 CDS YP_003632470.1 296125218 9141134 complement(227702..228199) 1 NC_014150.1 KEGG: bhy:BHWA1_00172 dihydrofolate reductase; PFAM: dihydrofolate reductase region; dihydrofolate reductase 228199 9141134 Bmur_0164 Brachyspira murdochii DSM 12563 dihydrofolate reductase YP_003632470.1 227702 R 526224 CDS YP_003632471.1 296125219 9141135 complement(228196..228996) 1 NC_014150.1 TIGRFAM: thymidylate synthase; KEGG: bhy:BHWA1_00171 thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 228996 9141135 Bmur_0165 Brachyspira murdochii DSM 12563 thymidylate synthase YP_003632471.1 228196 R 526224 CDS YP_003632472.1 296125220 9141136 complement(229153..230397) 1 NC_014150.1 TIGRFAM: peptidase T; KEGG: bhy:BHWA1_00150 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T 230397 9141136 Bmur_0166 Brachyspira murdochii DSM 12563 peptidase T YP_003632472.1 229153 R 526224 CDS YP_003632473.1 296125221 9141137 complement(230441..232003) 1 NC_014150.1 PFAM: AbgT transporter; KEGG: bhy:BHWA1_00149 ABG transport, transporter family; AbgT transporter 232003 9141137 Bmur_0167 Brachyspira murdochii DSM 12563 AbgT transporter YP_003632473.1 230441 R 526224 CDS YP_003632474.1 296125222 9141138 232367..232738 1 NC_014150.1 KEGG: bhy:BHWA1_00170 hypothetical protein; hypothetical protein 232738 9141138 Bmur_0168 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632474.1 232367 D 526224 CDS YP_003632475.1 296125223 9141139 232779..233051 1 NC_014150.1 KEGG: bhy:BHWA1_00169 hypothetical protein; hypothetical protein 233051 9141139 Bmur_0169 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632475.1 232779 D 526224 CDS YP_003632476.1 296125224 9141141 233194..234945 1 NC_014150.1 PFAM: ribonuclease BN; KEGG: bhy:BHWA1_00167 ribonuclease BN, ribonuclease BN-like family; ribonuclease BN 234945 9141141 Bmur_0170 Brachyspira murdochii DSM 12563 ribonuclease BN YP_003632476.1 233194 D 526224 CDS YP_003632477.1 296125225 9141142 complement(234993..236246) 1 NC_014150.1 KEGG: bhy:BHWA1_00358 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; homoserine dehydrogenase 236246 9141142 Bmur_0171 Brachyspira murdochii DSM 12563 homoserine dehydrogenase YP_003632477.1 234993 R 526224 CDS YP_003632478.1 296125226 9141143 236583..236750 1 NC_014150.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_00357 hypothetical protein; 4Fe-4S ferredoxin 236750 9141143 Bmur_0172 Brachyspira murdochii DSM 12563 4Fe-4S ferredoxin YP_003632478.1 236583 D 526224 CDS YP_003632479.1 296125227 9141144 236833..237621 1 NC_014150.1 KEGG: bhy:BHWA1_00356 D repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO 237621 9141144 Bmur_0173 Brachyspira murdochii DSM 12563 DNA repair protein RecO YP_003632479.1 236833 D 526224 CDS YP_003632480.1 296125228 9141145 complement(237610..238275) 1 NC_014150.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bhy:BHWA1_00355 phosphatase, HAD family; haloacid dehalogenase 238275 9141145 Bmur_0174 Brachyspira murdochii DSM 12563 haloacid dehalogenase YP_003632480.1 237610 R 526224 CDS YP_003632481.1 296125229 9141146 complement(238299..239264) 1 NC_014150.1 KEGG: bhy:BHWA1_00354 hypothetical protein; hypothetical protein 239264 9141146 Bmur_0175 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632481.1 238299 R 526224 CDS YP_003632482.1 296125230 9141147 complement(239290..241272) 1 NC_014150.1 PFAM: protein of unknown function DUF342; KEGG: bhy:BHWA1_00353 polymerase; hypothetical protein 241272 9141147 Bmur_0176 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632482.1 239290 R 526224 CDS YP_003632483.1 296125231 9141148 complement(241288..242106) 1 NC_014150.1 KEGG: bhy:BHWA1_00352 RNA polymerase sigma factor WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; RNA polymerase sigma 28 subunit FliA/WhiG 242106 9141148 Bmur_0177 Brachyspira murdochii DSM 12563 RNA polymerase sigma 28 subunit FliA/WhiG YP_003632483.1 241288 R 526224 CDS YP_003632484.1 296125232 9141149 complement(242356..242949) 1 NC_014150.1 KEGG: bhy:BHWA1_00351 hypothetical protein; hypothetical protein 242949 9141149 Bmur_0178 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632484.1 242356 R 526224 CDS YP_003632485.1 296125233 9141150 complement(242984..243847) 1 NC_014150.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bhy:BHWA1_00350 flagellar synthesis regulator FleN; cobyrinic acid ac-diamide synthase 243847 9141150 Bmur_0179 Brachyspira murdochii DSM 12563 cobyrinic acid ac-diamide synthase YP_003632485.1 242984 R 526224 CDS YP_003632486.1 296125234 9141151 complement(243883..245856) 1 NC_014150.1 KEGG: bhy:BHWA1_00349 flagellar biosynthesis regulator FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; GTP-binding signal recognition particle SRP54 G- domain-containing protein 245856 9141151 Bmur_0180 Brachyspira murdochii DSM 12563 GTP-binding signal recognition particle SRP54 G- domain-containing protein YP_003632486.1 243883 R 526224 CDS YP_003632487.1 296125235 9141152 complement(245934..246107) 1 NC_014150.1 KEGG: bhy:BHWA1_00348 hypothetical protein; hypothetical protein 246107 9141152 Bmur_0181 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632487.1 245934 R 526224 CDS YP_003632488.1 296125236 9141153 complement(246172..248292) 1 NC_014150.1 PFAM: type III secretion FHIPEP protein; KEGG: bhy:BHWA1_00347 flagellar biosynthesis protein A; type III secretion FHIPEP protein 248292 9141153 Bmur_0182 Brachyspira murdochii DSM 12563 type III secretion FHIPEP protein YP_003632488.1 246172 R 526224 CDS YP_003632489.1 296125237 9141154 complement(248305..249504) 1 NC_014150.1 KEGG: bhy:BHWA1_00346 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB 249504 9141154 Bmur_0183 Brachyspira murdochii DSM 12563 flagellar biosynthetic protein FlhB YP_003632489.1 248305 R 526224 CDS YP_003632490.1 296125238 9141155 complement(249501..250304) 1 NC_014150.1 KEGG: bhy:BHWA1_00345 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 250304 9141155 Bmur_0184 Brachyspira murdochii DSM 12563 flagellar biosynthetic protein FliR YP_003632490.1 249501 R 526224 CDS YP_003632491.1 296125239 9141156 complement(250344..250613) 1 NC_014150.1 KEGG: bhy:BHWA1_00344 flagellar biosynthetic protein (FliQ); TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; flagellar biosynthetic protein FliQ 250613 9141156 Bmur_0185 Brachyspira murdochii DSM 12563 flagellar biosynthetic protein FliQ YP_003632491.1 250344 R 526224 CDS YP_003632492.1 296125240 9141157 complement(250666..251454) 1 NC_014150.1 KEGG: bhy:BHWA1_00343 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 251454 9141157 Bmur_0186 Brachyspira murdochii DSM 12563 flagellar biosynthetic protein FliP YP_003632492.1 250666 R 526224 CDS YP_003632493.1 296125241 9141158 complement(251673..252173) 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00342 acetyltransferase, GT family; N-acetyltransferase GCN5 252173 9141158 Bmur_0187 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003632493.1 251673 R 526224 CDS YP_003632494.1 296125242 9141159 252351..253067 1 NC_014150.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_00341 hypothetical protein; hypothetical protein 253067 9141159 Bmur_0188 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632494.1 252351 D 526224 CDS YP_003632495.1 296125243 9141160 253698..256097 1 NC_014150.1 KEGG: bhy:BHWA1_00340 membrane carboxypeptidase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase 51; penicillin- binding protein transpeptidase; penicillin-binding protein 256097 9141160 Bmur_0189 Brachyspira murdochii DSM 12563 penicillin-binding protein YP_003632495.1 253698 D 526224 CDS YP_003632496.1 296125244 9141161 256124..258001 1 NC_014150.1 PFAM: TraB determinant protein; KEGG: bhy:BHWA1_00339 hypothetical protein; TraB determinant protein 258001 9141161 Bmur_0190 Brachyspira murdochii DSM 12563 TraB determinant protein YP_003632496.1 256124 D 526224 CDS YP_003632497.1 296125245 9141162 complement(258009..259838) 1 NC_014150.1 KEGG: cai:Caci_4166 hypothetical protein; hypothetical protein 259838 9141162 Bmur_0191 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632497.1 258009 R 526224 CDS YP_003632498.1 296125246 9141163 complement(259835..260884) 1 NC_014150.1 KEGG: pmt:PMT0296 hypothetical protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 260884 9141163 Bmur_0192 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632498.1 259835 R 526224 CDS YP_003632499.1 296125247 9141164 261167..262522 1 NC_014150.1 KEGG: bhy:BHWA1_00736 UDP-N-acetylmuramoylalanyl-D- glutamyl-2,6-diaminopimelate--D-alanyl- D-alanyl ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-di aminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase 262522 9141164 Bmur_0193 Brachyspira murdochii DSM 12563 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase YP_003632499.1 261167 D 526224 CDS YP_003632500.1 296125248 9141165 262525..263286 1 NC_014150.1 KEGG: bhy:BHWA1_00735 hypothetical protein; hypothetical protein 263286 9141165 Bmur_0194 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632500.1 262525 D 526224 CDS YP_003632501.1 296125249 9141166 complement(263421..267020) 1 NC_014150.1 KEGG: bhy:BHWA1_00612 DNA segregation ATPase FtsK/SpoIIIE-like protein; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma; AAA ATPase; DNA translocase FtsK 267020 9141166 Bmur_0195 Brachyspira murdochii DSM 12563 DNA translocase FtsK YP_003632501.1 263421 R 526224 CDS YP_003632502.1 296125250 9141167 complement(267036..267845) 1 NC_014150.1 PFAM: bacitracin resistance protein BacA; KEGG: bhy:BHWA1_00613 undecaprenyl pyrophosphate phosphatase; bacitracin resistance protein BacA 267845 9141167 Bmur_0196 Brachyspira murdochii DSM 12563 bacitracin resistance protein BacA YP_003632502.1 267036 R 526224 CDS YP_003632503.1 296125251 9141168 complement(268017..268745) 1 NC_014150.1 KEGG: bhy:BHWA1_00640 hypothetical protein; hypothetical protein 268745 9141168 Bmur_0197 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632503.1 268017 R 526224 CDS YP_003632504.1 296125252 9141169 complement(268876..275883) 1 NC_014150.1 KEGG: bhy:BHWA1_00641 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; WD40 domain protein beta Propeller; hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 275883 9141169 Bmur_0198 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632504.1 268876 R 526224 CDS YP_003632505.1 296125253 9141170 complement(275986..276318) 1 NC_014150.1 KEGG: bhy:BHWA1_00642 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 276318 9141170 Bmur_0199 Brachyspira murdochii DSM 12563 anti-sigma-factor antagonist YP_003632505.1 275986 R 526224 CDS YP_003632506.1 296125254 9141171 complement(276520..277038) 1 NC_014150.1 KEGG: bhy:BHWA1_00643 hypothetical protein; hypothetical protein 277038 9141171 Bmur_0200 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632506.1 276520 R 526224 CDS YP_003632507.1 296125255 9141172 complement(277047..277577) 1 NC_014150.1 KEGG: bhy:BHWA1_00644 hypothetical protein; hypothetical protein 277577 9141172 Bmur_0201 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632507.1 277047 R 526224 CDS YP_003632508.1 296125256 9141173 complement(277807..278394) 1 NC_014150.1 KEGG: bhy:BHWA1_00645 regulatory protein TetR family; TetR family transcriptional regulator 278394 9141173 Bmur_0202 Brachyspira murdochii DSM 12563 TetR family transcriptional regulator YP_003632508.1 277807 R 526224 CDS YP_003632509.1 296125257 9141174 278710..281883 1 NC_014150.1 PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_00646 acriflavin resistance protein; acriflavin resistance protein 281883 9141174 Bmur_0203 Brachyspira murdochii DSM 12563 acriflavin resistance protein YP_003632509.1 278710 D 526224 CDS YP_003632510.1 296125258 9141175 complement(282218..283849) 1 NC_014150.1 KEGG: bhy:BHWA1_00165 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; molecular chaperone GroEL 283849 9141175 Bmur_0204 Brachyspira murdochii DSM 12563 molecular chaperone GroEL YP_003632510.1 282218 R 526224 CDS YP_003632511.1 296125259 9141176 complement(284041..284250) 1 NC_014150.1 KEGG: bhy:BHWA1_00164 30S ribosomal protein S21 TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 284250 9141176 Bmur_0205 Brachyspira murdochii DSM 12563 30S ribosomal protein S21 YP_003632511.1 284041 R 526224 CDS YP_003632512.1 296125260 9141179 complement(284513..285448) 1 NC_014150.1 KEGG: bhy:BHWA1_00161 hypothetical protein; hypothetical protein 285448 9141179 Bmur_0206 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632512.1 284513 R 526224 CDS YP_003632513.1 296125261 9141180 complement(285502..286392) 1 NC_014150.1 KEGG: bhy:BHWA1_00691 hypothetical protein; hypothetical protein 286392 9141180 Bmur_0207 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632513.1 285502 R 526224 CDS YP_003632514.1 296125262 9141181 complement(287066..287872) 1 NC_014150.1 PFAM: protein of unknown function DUF140; KEGG: bhy:BHWA1_00630 Ttg2B, ABC-type transport system, permease component; hypothetical protein 287872 9141181 Bmur_0208 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632514.1 287066 R 526224 CDS YP_003632515.1 296125263 9141182 complement(287894..289297) 1 NC_014150.1 KEGG: bhy:BHWA1_00631 DNA helicase, DnaB type; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; replicative DNA helicase 289297 9141182 Bmur_0209 Brachyspira murdochii DSM 12563 replicative DNA helicase YP_003632515.1 287894 R 526224 CDS YP_003632516.1 296125264 9141183 complement(289335..289853) 1 NC_014150.1 KEGG: bhy:BHWA1_00632 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9-like; 50S ribosomal protein L9 289853 9141183 Bmur_0210 Brachyspira murdochii DSM 12563 50S ribosomal protein L9 YP_003632516.1 289335 R 526224 CDS YP_003632517.1 296125265 9141184 290039..290554 1 NC_014150.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bhy:BHWA1_00633 flavodoxin; flavodoxin/nitric oxide synthase 290554 9141184 Bmur_0211 Brachyspira murdochii DSM 12563 flavodoxin/nitric oxide synthase YP_003632517.1 290039 D 526224 CDS YP_003632518.1 296125266 9141185 complement(290633..291445) 1 NC_014150.1 KEGG: bhy:BHWA1_00634 TatD protein; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase 291445 9141185 Bmur_0212 Brachyspira murdochii DSM 12563 TatD family hydrolase YP_003632518.1 290633 R 526224 CDS YP_003632519.1 296125267 9141186 complement(291466..291816) 1 NC_014150.1 PFAM: histidine triad (HIT) protein; KEGG: bhy:BHWA1_00635 protein kinase C; histidine triad (HIT) protein 291816 9141186 Bmur_0213 Brachyspira murdochii DSM 12563 histidine triad (HIT) protein YP_003632519.1 291466 R 526224 CDS YP_003632520.1 296125268 9141187 291995..292801 1 NC_014150.1 PFAM: zinc/iron permease; KEGG: bhy:BHWA1_00636 zinc transporter ZupT; zinc/iron permease 292801 9141187 Bmur_0214 Brachyspira murdochii DSM 12563 zinc/iron permease YP_003632520.1 291995 D 526224 CDS YP_003632521.1 296125269 9141188 292822..293772 1 NC_014150.1 KEGG: bhy:BHWA1_00639 hydrolase of the alpha/beta superfamily; alpha/beta superfamily hydrolase 293772 9141188 Bmur_0215 Brachyspira murdochii DSM 12563 alpha/beta superfamily hydrolase YP_003632521.1 292822 D 526224 CDS YP_003632522.1 296125270 9141189 complement(293805..294743) 1 NC_014150.1 KEGG: bhy:BHWA1_00660 hypothetical protein; hypothetical protein 294743 9141189 Bmur_0216 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632522.1 293805 R 526224 CDS YP_003632523.1 296125271 9141190 complement(294808..296145) 1 NC_014150.1 KEGG: bhy:BHWA1_00118 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 296145 9141190 Bmur_0217 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003632523.1 294808 R 526224 CDS YP_003632524.1 296125272 9141191 complement(296228..297115) 1 NC_014150.1 KEGG: bhy:BHWA1_00117 von Willebrand factor type A (vWA) domain containing protein; PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; hypothetical protein 297115 9141191 Bmur_0218 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632524.1 296228 R 526224 CDS YP_003632525.1 296125273 9141192 complement(297232..298380) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00116 ankyrin repeat-containing protein; ankyrin 298380 9141192 Bmur_0219 Brachyspira murdochii DSM 12563 ankyrin YP_003632525.1 297232 R 526224 CDS YP_003632526.1 296125274 9141193 298546..299376 1 NC_014150.1 SMART: beta-lactamase domain protein; KEGG: bhy:BHWA1_00115 metallo-beta-lactamase; beta-lactamase 299376 9141193 Bmur_0220 Brachyspira murdochii DSM 12563 beta-lactamase YP_003632526.1 298546 D 526224 CDS YP_003632527.1 296125275 9141195 complement(299915..300289) 1 NC_014150.1 KEGG: bhy:BHWA1_00113 truncated hemoglobin; hypothetical protein 300289 9141195 Bmur_0222 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632527.1 299915 R 526224 CDS YP_003632528.1 296125276 9141196 complement(300495..301337) 1 NC_014150.1 KEGG: bhy:BHWA1_00112 3-hydroxybutyryl-CoA dehydratase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxybutyryl-CoA dehydrogenase 301337 9141196 Bmur_0223 Brachyspira murdochii DSM 12563 3-hydroxybutyryl-CoA dehydrogenase YP_003632528.1 300495 R 526224 CDS YP_003632529.1 296125277 9141197 complement(301447..302223) 1 NC_014150.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bhy:BHWA1_00111 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase 302223 9141197 Bmur_0224 Brachyspira murdochii DSM 12563 enoyl-CoA hydratase YP_003632529.1 301447 R 526224 CDS YP_003632530.1 296125278 9141198 complement(302860..304047) 1 NC_014150.1 KEGG: bhy:BHWA1_00110 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 304047 9141198 Bmur_0225 Brachyspira murdochii DSM 12563 acetyl-CoA acetyltransferase YP_003632530.1 302860 R 526224 CDS YP_003632531.1 296125279 9141199 304424..306250 1 NC_014150.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; KEGG: bhy:BHWA1_00109 D mismatch repair protein; SMART: MutL dimerisation; ATP-binding region ATPase domain protein; DNA mismatch repair protein MutL 306250 9141199 Bmur_0226 Brachyspira murdochii DSM 12563 DNA mismatch repair protein MutL YP_003632531.1 304424 D 526224 CDS YP_003632532.1 296125280 9141200 complement(306666..307160) 1 NC_014150.1 KEGG: bhy:BHWA1_01149 hypothetical protein; hypothetical protein 307160 9141200 Bmur_0227 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632532.1 306666 R 526224 CDS YP_003632533.1 296125281 9141201 complement(307284..308696) 1 NC_014150.1 KEGG: bhy:BHWA1_01148 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 308696 9141201 Bmur_0228 Brachyspira murdochii DSM 12563 amidophosphoribosyltransferase YP_003632533.1 307284 R 526224 CDS YP_003632534.1 296125282 9141202 309281..311428 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00072 ankyrin repeat-containing protein; ankyrin 311428 9141202 Bmur_0229 Brachyspira murdochii DSM 12563 ankyrin YP_003632534.1 309281 D 526224 CDS YP_003632535.1 296125283 9141203 311480..312352 1 NC_014150.1 KEGG: bhy:BHWA1_00126 hypothetical protein; hypothetical protein 312352 9141203 Bmur_0230 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632535.1 311480 D 526224 CDS YP_003632536.1 296125284 9141204 312572..313330 1 NC_014150.1 KEGG: bhy:BHWA1_00105 uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-related protein 313330 9141204 Bmur_0231 Brachyspira murdochii DSM 12563 phage SPO1 DNA polymerase-related protein YP_003632536.1 312572 D 526224 CDS YP_003632537.1 296125285 9141205 313362..314165 1 NC_014150.1 KEGG: bhy:BHWA1_00104 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 314165 9141205 Bmur_0232 Brachyspira murdochii DSM 12563 ankyrin YP_003632537.1 313362 D 526224 CDS YP_003632538.1 296125286 9141206 314233..315069 1 NC_014150.1 KEGG: bhy:BHWA1_00103 hypothetical protein; hypothetical protein 315069 9141206 Bmur_0233 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632538.1 314233 D 526224 CDS YP_003632539.1 296125287 9141207 315137..318421 1 NC_014150.1 KEGG: bhy:BHWA1_00102 molybdate metabolism regulator; molybdate metabolism regulator 318421 9141207 Bmur_0234 Brachyspira murdochii DSM 12563 molybdate metabolism regulator YP_003632539.1 315137 D 526224 CDS YP_003632540.1 296125288 9141208 318414..319724 1 NC_014150.1 KEGG: bhy:BHWA1_00101 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; RNA polymerase sigma 54 subunit RpoN 319724 9141208 Bmur_0235 Brachyspira murdochii DSM 12563 RNA polymerase sigma 54 subunit RpoN YP_003632540.1 318414 D 526224 CDS YP_003632541.1 296125289 9141209 319740..320510 1 NC_014150.1 KEGG: bhy:BHWA1_00100 hypothetical protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 320510 9141209 Bmur_0236 Brachyspira murdochii DSM 12563 sigma 54 modulation protein/ribosomal protein S30EA YP_003632541.1 319740 D 526224 CDS YP_003632542.1 296125290 9141210 320552..321016 1 NC_014150.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_00099 PTS system, fructose subfamily, IIC subunit; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 321016 9141210 Bmur_0237 Brachyspira murdochii DSM 12563 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_003632542.1 320552 D 526224 CDS YP_003632543.1 296125291 9141211 321016..321978 1 NC_014150.1 PFAM: HPr serine kinase domain protein; KEGG: bhy:BHWA1_00098 HPr kinase/phosphatase; HPr kinase 321978 9141211 Bmur_0238 Brachyspira murdochii DSM 12563 HPr kinase YP_003632543.1 321016 D 526224 CDS YP_003632544.1 296125292 9141212 complement(321986..322318) 1 NC_014150.1 KEGG: bhy:BHWA1_00097 septum formation initiator; septum formation initiator 322318 9141212 Bmur_0239 Brachyspira murdochii DSM 12563 septum formation initiator YP_003632544.1 321986 R 526224 CDS YP_003632545.1 296125293 9141213 complement(322355..323290) 1 NC_014150.1 KEGG: bhy:BHWA1_00096 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 323290 9141213 Bmur_0240 Brachyspira murdochii DSM 12563 S-adenosyl-methyltransferase MraW YP_003632545.1 322355 R 526224 CDS YP_003632546.1 296125294 9141214 323609..324139 1 NC_014150.1 PFAM: protein of unknown function DUF308 membrane; KEGG: bhy:BHWA1_00095 hypothetical protein; hypothetical protein 324139 9141214 Bmur_0241 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632546.1 323609 D 526224 CDS YP_003632547.1 296125295 9141215 324207..324419 1 NC_014150.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_00094 nitrite reductase [NAD(P)H], large subunit; BFD domain-containing protein (2Fe-2S)-binding protein 324419 9141215 Bmur_0242 Brachyspira murdochii DSM 12563 BFD domain-containing protein (2Fe-2S)-binding protein YP_003632547.1 324207 D 526224 CDS YP_003632548.1 296125296 9141216 324412..324588 1 NC_014150.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_00093 Fer2 BFD, BFD-like [2Fe-2S] binding domain protein; BFD domain-containing protein (2Fe-2S)-binding protein 324588 9141216 Bmur_0243 Brachyspira murdochii DSM 12563 BFD domain-containing protein (2Fe-2S)-binding protein YP_003632548.1 324412 D 526224 CDS YP_003632549.1 296125297 9141217 complement(324663..325580) 1 NC_014150.1 KEGG: bhy:BHWA1_00092 transketolase, pyridine binding subunit; PFAM: transketolase central region; transketolase domain protein; SMART: transketolase central region; transketolase 325580 9141217 Bmur_0244 Brachyspira murdochii DSM 12563 transketolase YP_003632549.1 324663 R 526224 CDS YP_003632550.1 296125298 9141218 complement(325612..326409) 1 NC_014150.1 PFAM: transketolase domain protein; KEGG: bhy:BHWA1_00091 transketolase N-terminal subunit; transketolase 326409 9141218 Bmur_0245 Brachyspira murdochii DSM 12563 transketolase YP_003632550.1 325612 R 526224 CDS YP_003632551.1 296125299 9141219 complement(326625..328559) 1 NC_014150.1 KEGG: bhy:BHWA1_00135 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 328559 9141219 Bmur_0246 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003632551.1 326625 R 526224 CDS YP_003632552.1 296125300 9141220 complement(328750..329133) 1 NC_014150.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: bhy:BHWA1_00090 endonuclease containing a URI domain; Excinuclease ABC C subunit domain protein 329133 9141220 Bmur_0247 Brachyspira murdochii DSM 12563 Excinuclease ABC C subunit domain protein YP_003632552.1 328750 R 526224 CDS YP_003632553.1 296125301 9141221 complement(329130..329804) 1 NC_014150.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: bhy:BHWA1_00089 spore coat polysaccharide biosynthesis protein F; acylneuraminate cytidylyltransferase 329804 9141221 Bmur_0248 Brachyspira murdochii DSM 12563 acylneuraminate cytidylyltransferase YP_003632553.1 329130 R 526224 CDS YP_003632554.1 296125302 9141222 complement(330078..330893) 1 NC_014150.1 TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; KEGG: bhy:BHWA1_00088 2-dehydro-3- deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; 2-dehydro-3-deoxyphosphooctonate aldolase 330893 9141222 Bmur_0249 Brachyspira murdochii DSM 12563 2-dehydro-3-deoxyphosphooctonate aldolase YP_003632554.1 330078 R 526224 CDS YP_003632555.1 296125303 9141223 331054..331617 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00087 acetyltransferase, GT family; N-acetyltransferase GCN5 331617 9141223 Bmur_0250 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003632555.1 331054 D 526224 CDS YP_003632556.1 296125304 9141224 331791..334163 1 NC_014150.1 PFAM: glycoside hydrolase 3 domain protein; KEGG: bhy:BHWA1_00085 glycoside hydrolase, family 3 domain protein; glycoside hydrolase 3 334163 9141224 Bmur_0251 Brachyspira murdochii DSM 12563 glycoside hydrolase 3 YP_003632556.1 331791 D 526224 CDS YP_003632557.1 296125305 9141225 complement(334271..335269) 1 NC_014150.1 KEGG: bhy:BHWA1_00075 sucrose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 335269 9141225 Bmur_0252 Brachyspira murdochii DSM 12563 LacI family transcriptional regulator YP_003632557.1 334271 R 526224 CDS YP_003632558.1 296125306 9141226 335661..337085 1 NC_014150.1 KEGG: bhy:BHWA1_00076 PTS system, IIABC component; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-like transporter subunit IIB 337085 9141226 Bmur_0253 Brachyspira murdochii DSM 12563 PTS system glucose-like transporter subunit IIB YP_003632558.1 335661 D 526224 CDS YP_003632559.1 296125307 9141227 337229..338719 1 NC_014150.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: glycosyl hydrolase 32 domain protein; KEGG: bhy:BHWA1_00077 beta-fructosidase (levanase/invertase); SMART: glycoside hydrolase 32; sucrose-6-phosphate hydrolase 338719 9141227 Bmur_0254 Brachyspira murdochii DSM 12563 sucrose-6-phosphate hydrolase YP_003632559.1 337229 D 526224 CDS YP_003632560.1 296125308 9141228 338792..339256 1 NC_014150.1 KEGG: bhy:BHWA1_00078 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; transcription elongation factor GreA 339256 9141228 Bmur_0255 Brachyspira murdochii DSM 12563 transcription elongation factor GreA YP_003632560.1 338792 D 526224 CDS YP_003632561.1 296125309 9141229 339435..340928 1 NC_014150.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: bhy:BHWA1_00079 glycogen synthase; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; glycogen/starch synthase 340928 9141229 Bmur_0256 Brachyspira murdochii DSM 12563 glycogen/starch synthase YP_003632561.1 339435 D 526224 CDS YP_003632562.1 296125310 9141230 340961..341485 1 NC_014150.1 PFAM: ThiJ/PfpI domain protein; KEGG: bhy:BHWA1_00080 intracellular protease; ThiJ/PfpI domain-containing protein 341485 9141230 Bmur_0257 Brachyspira murdochii DSM 12563 ThiJ/PfpI domain-containing protein YP_003632562.1 340961 D 526224 CDS YP_003632563.1 296125311 9141231 341682..342479 1 NC_014150.1 KEGG: bhy:BHWA1_00081 hydrolase 3, haloacid dehalogenase-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 342479 9141231 Bmur_0258 Brachyspira murdochii DSM 12563 cof family hydrolase YP_003632563.1 341682 D 526224 CDS YP_003632564.1 296125312 9141232 342498..343283 1 NC_014150.1 KEGG: bhy:BHWA1_00082 hydrolase 3, haloacid dehalogenase-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 343283 9141232 Bmur_0259 Brachyspira murdochii DSM 12563 cof family hydrolase YP_003632564.1 342498 D 526224 CDS YP_003632565.1 296125313 9141233 343362..344648 1 NC_014150.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; KEGG: bhy:BHWA1_00083 glucose-1-phosphate adenylyltransferase; PFAM: nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 344648 9141233 Bmur_0260 Brachyspira murdochii DSM 12563 glucose-1-phosphate adenylyltransferase YP_003632565.1 343362 D 526224 CDS YP_003632566.1 296125314 9141234 344753..345763 1 NC_014150.1 KEGG: bhy:BHWA1_00533 ribosomal large subunit pseudouridine synthase C; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 345763 9141234 Bmur_0261 Brachyspira murdochii DSM 12563 pseudouridine synthase YP_003632566.1 344753 D 526224 CDS YP_003632567.1 296125315 9141235 345896..346327 1 NC_014150.1 KEGG: bhy:BHWA1_00532 periplasmic protein; hypothetical protein 346327 9141235 Bmur_0262 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632567.1 345896 D 526224 CDS YP_003632568.1 296125316 9141236 complement(346456..347691) 1 NC_014150.1 PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_00838 GltP, Na+/H+-dicarboxylate symporter; sodium:dicarboxylate symporter 347691 9141236 Bmur_0263 Brachyspira murdochii DSM 12563 sodium:dicarboxylate symporter YP_003632568.1 346456 R 526224 CDS YP_003632569.1 296125317 9141237 complement(347709..348908) 1 NC_014150.1 PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00840 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; class I and II aminotransferase 348908 9141237 Bmur_0264 Brachyspira murdochii DSM 12563 class I and II aminotransferase YP_003632569.1 347709 R 526224 CDS YP_003632570.1 296125318 9141238 349093..349761 1 NC_014150.1 PFAM: YheO domain protein; KEGG: hin:HI0575 hypothetical protein; hypothetical protein 349761 9141238 Bmur_0265 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632570.1 349093 D 526224 CDS YP_003632571.1 296125319 9141239 complement(349963..350724) 1 NC_014150.1 KEGG: bhy:BHWA1_02621 hypothetical protein; hypothetical protein 350724 9141239 Bmur_0266 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632571.1 349963 R 526224 CDS YP_003632572.1 296125320 9141240 complement(350796..352412) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_00181 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 352412 9141240 Bmur_0267 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003632572.1 350796 R 526224 CDS YP_003632573.1 296125321 9141241 complement(352491..352793) 1 NC_014150.1 PFAM: DNA polymerase beta domain protein region; KEGG: bhy:BHWA1_00438 restriction modification system DNA specificity domain protein; DNA polymerase beta domain-containing protein region 352793 9141241 Bmur_0268 Brachyspira murdochii DSM 12563 DNA polymerase beta domain-containing protein region YP_003632573.1 352491 R 526224 CDS YP_003632574.1 296125322 9141242 complement(352790..353233) 1 NC_014150.1 KEGG: bhy:BHWA1_00437 nucleotidyltransferase substrate binding protein; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: nucleotidyltransferase substrate binding protein HI0074; nucleotidyltransferase substrate binding protein 353233 9141242 Bmur_0269 Brachyspira murdochii DSM 12563 nucleotidyltransferase substrate binding protein YP_003632574.1 352790 R 526224 CDS YP_003632575.1 296125323 9141243 complement(353280..354470) 1 NC_014150.1 KEGG: bhy:BHWA1_00180 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 354470 9141243 Bmur_0270 Brachyspira murdochii DSM 12563 acetate kinase YP_003632575.1 353280 R 526224 CDS YP_003632576.1 296125324 9141244 complement(354842..356083) 1 NC_014150.1 PFAM: peptidase M30, hyicolysin; KEGG: bhy:BHWA1_01703 hypothetical protein; peptidase M30, hyicolysin 356083 9141244 Bmur_0271 Brachyspira murdochii DSM 12563 peptidase M30, hyicolysin YP_003632576.1 354842 R 526224 CDS YP_003632577.1 296125325 9141245 356411..357184 1 NC_014150.1 PFAM: SCP-like extracellular; KEGG: bhy:BHWA1_00178 spore coat assembly protein; hypothetical protein 357184 9141245 Bmur_0272 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632577.1 356411 D 526224 CDS YP_003632578.1 296125326 9141246 357209..357619 1 NC_014150.1 PFAM: biopolymer transporter ExbD/TolR; KEGG: bhy:BHWA1_00177 biopolymer transport protein ExbD/TolR; biopolymer transporter ExbD/TolR 357619 9141246 Bmur_0273 Brachyspira murdochii DSM 12563 biopolymer transporter ExbD/TolR YP_003632578.1 357209 D 526224 CDS YP_003632579.1 296125327 9141247 complement(357626..358681) 1 NC_014150.1 KEGG: bhy:BHWA1_02691 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 358681 9141247 Bmur_0274 Brachyspira murdochii DSM 12563 dTDP-glucose 4,6-dehydratase YP_003632579.1 357626 R 526224 CDS YP_003632580.1 296125328 9141248 complement(358719..360674) 1 NC_014150.1 KEGG: bhy:BHWA1_00176 ABC transporter, transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 360674 9141248 Bmur_0275 Brachyspira murdochii DSM 12563 ABC transporter YP_003632580.1 358719 R 526224 CDS YP_003632581.1 296125329 9141249 complement(360719..361399) 1 NC_014150.1 KEGG: bhy:BHWA1_00175 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 361399 9141249 Bmur_0276 Brachyspira murdochii DSM 12563 ABC transporter YP_003632581.1 360719 R 526224 CDS YP_003632582.1 296125330 9141250 complement(361392..362687) 1 NC_014150.1 PFAM: protein of unknown function DUF214; KEGG: bhy:BHWA1_00174 lipoprotein releasing system, hypothetical protein, LolC/E family; hypothetical protein 362687 9141250 Bmur_0277 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632582.1 361392 R 526224 CDS YP_003632583.1 296125331 9141251 363072..363260 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 363260 9141251 Bmur_0278 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632583.1 363072 D 526224 CDS YP_003632584.1 296125332 9141252 complement(363522..363920) 1 NC_014150.1 PFAM: phosphoribosyltransferase; KEGG: bhy:BHWA1_00123 purine phosphoribosyltransferase; phosphoribosyltransferase 363920 9141252 Bmur_0279 Brachyspira murdochii DSM 12563 phosphoribosyltransferase YP_003632584.1 363522 R 526224 CDS YP_003632585.1 296125333 9141253 complement(363939..366362) 1 NC_014150.1 TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: bhy:BHWA1_00122 phenylalanyl-tRNA synthetase alpha chain; phenylalanyl-tRNA synthetase subunit beta 366362 9141253 Bmur_0280 Brachyspira murdochii DSM 12563 phenylalanyl-tRNA synthetase subunit beta YP_003632585.1 363939 R 526224 CDS YP_003632586.1 296125334 9141254 complement(366430..367449) 1 NC_014150.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; KEGG: bhy:BHWA1_00121 phenylalanyl-tRNA synthetase alpha chain; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 367449 9141254 Bmur_0281 Brachyspira murdochii DSM 12563 phenylalanyl-tRNA synthetase subunit alpha YP_003632586.1 366430 R 526224 CDS YP_003632587.1 296125335 9141255 368219..369241 1 NC_014150.1 TIGRFAM: metalloendopeptidase, glycoprotease; KEGG: bhy:BHWA1_00427 O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; metalloendopeptidase, glycoprotease 369241 9141255 Bmur_0282 Brachyspira murdochii DSM 12563 metalloendopeptidase, glycoprotease YP_003632587.1 368219 D 526224 CDS YP_003632588.1 296125336 9141256 complement(369339..370823) 1 NC_014150.1 KEGG: bhy:BHWA1_00277 hypothetical protein; hypothetical protein 370823 9141256 Bmur_0283 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632588.1 369339 R 526224 CDS YP_003632589.1 296125337 9141257 complement(370986..371972) 1 NC_014150.1 KEGG: bhy:BHWA1_00276 hypothetical protein; hypothetical protein 371972 9141257 Bmur_0284 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632589.1 370986 R 526224 CDS YP_003632590.1 296125338 9141258 complement(372022..373794) 1 NC_014150.1 KEGG: bhy:BHWA1_00275 serine phosphotase RsbU sigma factor regulatory protein; PFAM: Stage II sporulation E family protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; protein serine phosphatase with GAF(s) sensor(s) 373794 9141258 Bmur_0285 Brachyspira murdochii DSM 12563 protein serine phosphatase with GAF(s) sensor(s) YP_003632590.1 372022 R 526224 CDS YP_003632591.1 296125339 9141259 374003..374977 1 NC_014150.1 PFAM: dihydrouridine synthase DuS; KEGG: bhy:BHWA1_00274 dihydrouridine synthase-like (DUS-like) FMN-binding domain protein; dihydrouridine synthase DuS 374977 9141259 Bmur_0286 Brachyspira murdochii DSM 12563 dihydrouridine synthase DuS YP_003632591.1 374003 D 526224 CDS YP_003632592.1 296125340 9141260 complement(375042..376157) 1 NC_014150.1 KEGG: cpf:CPF_2654 maltose/maltodextrin ABC transporter, ATP-binding protein; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter 376157 9141260 Bmur_0287 Brachyspira murdochii DSM 12563 ABC transporter YP_003632592.1 375042 R 526224 CDS YP_003632593.1 296125341 9141261 complement(376227..377237) 1 NC_014150.1 PFAM: phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: bhy:BHWA1_00273 phosphoenolpyruvate-dependent sugar phosphotransferase system; phosphotransferase system EIIB/cysteine, phosphorylation site 377237 9141261 Bmur_0288 Brachyspira murdochii DSM 12563 phosphotransferase system EIIB/cysteine, phosphorylation site YP_003632593.1 376227 R 526224 CDS YP_003632594.1 296125342 9141262 complement(377367..378827) 1 NC_014150.1 KEGG: bhy:BHWA1_00272 pts system, N- acetylglucosamine-specific IIBC component; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system N-acetylglucosamine-specific transporter subunit IIBC 378827 9141262 Bmur_0289 Brachyspira murdochii DSM 12563 PTS system N-acetylglucosamine-specific transporter subunit IIBC YP_003632594.1 377367 R 526224 CDS YP_003632595.1 296125343 9141264 complement(379675..381009) 1 NC_014150.1 KEGG: bhy:BHWA1_00270 response regulatory protein (AtoC); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis- type; SMART: response regulator receiver; AAA ATPase; Fis family transcriptional regulator 381009 9141264 Bmur_0291 Brachyspira murdochii DSM 12563 Fis family transcriptional regulator YP_003632595.1 379675 R 526224 CDS YP_003632596.1 296125344 9141265 complement(381002..382183) 1 NC_014150.1 KEGG: bhy:BHWA1_00269 sensory box histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 382183 9141265 Bmur_0292 Brachyspira murdochii DSM 12563 PAS/PAC sensor signal transduction histidine kinase YP_003632596.1 381002 R 526224 CDS YP_003632597.1 296125345 9141266 complement(382711..383754) 1 NC_014150.1 KEGG: bhy:BHWA1_00578 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 383754 9141266 Bmur_0293 Brachyspira murdochii DSM 12563 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003632597.1 382711 R 526224 CDS YP_003632598.1 296125346 9141267 complement(383851..383946) 1 NC_014150.1 KEGG: bhy:BHWA1_00578 3-deoxy-7-phosphoheptulonate synthase; hypothetical protein 383946 9141267 Bmur_0294 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632598.1 383851 R 526224 CDS YP_003632599.1 296125347 9141268 complement(384252..384950) 1 NC_014150.1 KEGG: bhy:BHWA1_00579 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase 1; purine nucleoside phosphorylase 384950 9141268 Bmur_0295 Brachyspira murdochii DSM 12563 purine nucleoside phosphorylase YP_003632599.1 384252 R 526224 CDS YP_003632600.1 296125348 9141269 385085..385642 1 NC_014150.1 KEGG: bhy:BHWA1_00547 hypothetical GTP-binding protein; GTP-binding protein 385642 9141269 Bmur_0296 Brachyspira murdochii DSM 12563 GTP-binding protein YP_003632600.1 385085 D 526224 CDS YP_003632601.1 296125349 9141270 complement(385646..387907) 1 NC_014150.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; Hemerythrin HHE cation binding domain protein; KEGG: bhy:BHWA1_00548 methyl-accepting chemotaxis protein McpB; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 387907 9141270 Bmur_0297 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003632601.1 385646 R 526224 CDS YP_003632602.1 296125350 9141271 complement(388099..390348) 1 NC_014150.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: bhy:BHWA1_00549 methyl-accepting chemotaxis protein McpB; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 390348 9141271 Bmur_0298 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003632602.1 388099 R 526224 CDS YP_003632603.1 296125351 9141272 390534..391727 1 NC_014150.1 KEGG: bhy:BHWA1_00597 hypothetical protein; hypothetical protein 391727 9141272 Bmur_0299 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632603.1 390534 D 526224 CDS YP_003632604.1 296125352 9141273 391786..392703 1 NC_014150.1 KEGG: bhy:BHWA1_00853 hypothetical protein; hypothetical protein 392703 9141273 Bmur_0300 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632604.1 391786 D 526224 CDS YP_003632605.1 296125353 9141274 392850..393959 1 NC_014150.1 KEGG: bhy:BHWA1_00591 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 393959 9141274 Bmur_0301 Brachyspira murdochii DSM 12563 ankyrin YP_003632605.1 392850 D 526224 CDS YP_003632606.1 296125354 9141275 complement(394313..394822) 1 NC_014150.1 KEGG: bhy:BHWA1_01574 hypothetical protein; hypothetical protein 394822 9141275 Bmur_0302 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632606.1 394313 R 526224 CDS YP_003632607.1 296125355 9141276 complement(394989..395345) 1 NC_014150.1 KEGG: bhy:BHWA1_00763 FMN-binding domain protein; FMN-binding domain-containing protein 395345 9141276 Bmur_0303 Brachyspira murdochii DSM 12563 FMN-binding domain-containing protein YP_003632607.1 394989 R 526224 CDS YP_003632608.1 296125356 9141277 complement(395416..395844) 1 NC_014150.1 KEGG: bhy:BHWA1_00764 hypothetical protein; hypothetical protein 395844 9141277 Bmur_0304 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632608.1 395416 R 526224 CDS YP_003632609.1 296125357 9141278 395993..397597 1 NC_014150.1 KEGG: bhy:BHWA1_00765 hypothetical protein; hypothetical protein 397597 9141278 Bmur_0305 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632609.1 395993 D 526224 CDS YP_003632610.1 296125358 9141279 397837..399744 1 NC_014150.1 KEGG: bhy:BHWA1_00766 predicted hydrolase of the metallo-beta-lactamase superfamily; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase 399744 9141279 Bmur_0306 Brachyspira murdochii DSM 12563 RNA-metabolising metallo-beta-lactamase YP_003632610.1 397837 D 526224 CDS YP_003632611.1 296125359 9141280 399762..400736 1 NC_014150.1 KEGG: bhy:BHWA1_00767 SppA, periplasmic serine proteases (ClpP class); TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 400736 9141280 Bmur_0307 Brachyspira murdochii DSM 12563 signal peptide peptidase SppA, 36K type YP_003632611.1 399762 D 526224 CDS YP_003632612.1 296125360 9141281 400736..401302 1 NC_014150.1 KEGG: bhy:BHWA1_00768 hypothetical protein; hypothetical protein 401302 9141281 Bmur_0308 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632612.1 400736 D 526224 CDS YP_003632613.1 296125361 9141282 401304..402557 1 NC_014150.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bhy:BHWA1_00769 permease YjgP/YjgQ; YjgP/YjgQ family permease 402557 9141282 Bmur_0309 Brachyspira murdochii DSM 12563 YjgP/YjgQ family permease YP_003632613.1 401304 D 526224 CDS YP_003632614.1 296125362 9141283 402561..403274 1 NC_014150.1 KEGG: bhy:BHWA1_00553 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase 403274 9141283 Bmur_0310 Brachyspira murdochii DSM 12563 TrmH family RNA methyltransferase YP_003632614.1 402561 D 526224 CDS YP_003632615.1 296125363 9141284 403391..403753 1 NC_014150.1 KEGG: bhy:BHWA1_00554 hypothetical protein; hypothetical protein 403753 9141284 Bmur_0311 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632615.1 403391 D 526224 CDS YP_003632616.1 296125364 9141285 403769..404530 1 NC_014150.1 KEGG: bhy:BHWA1_00555 hypothetical protein; hypothetical protein 404530 9141285 Bmur_0312 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632616.1 403769 D 526224 CDS YP_003632617.1 296125365 9141286 complement(404534..404983) 1 NC_014150.1 KEGG: bhy:BHWA1_00709 hypothetical protein; hypothetical protein 404983 9141286 Bmur_0313 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632617.1 404534 R 526224 CDS YP_003632618.1 296125366 9141287 complement(404987..406393) 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00710 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; binding-protein-dependent transport system inner membrane protein 406393 9141287 Bmur_0314 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003632618.1 404987 R 526224 CDS YP_003632619.1 296125367 9141288 complement(406393..407433) 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00711 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; binding-protein-dependent transport system inner membrane protein 407433 9141288 Bmur_0315 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003632619.1 406393 R 526224 CDS YP_003632620.1 296125368 9141289 complement(407526..408515) 1 NC_014150.1 KEGG: bhy:BHWA1_00243 hypothetical protein; Crp/Fnr family transcriptional regulator 408515 9141289 Bmur_0316 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003632620.1 407526 R 526224 CDS YP_003632621.1 296125369 9141290 complement(408841..409332) 1 NC_014150.1 KEGG: bhy:BHWA1_00712 ribonuclease H; PFAM: ribonuclease H; ribonuclease H 409332 9141290 Bmur_0317 Brachyspira murdochii DSM 12563 ribonuclease H YP_003632621.1 408841 R 526224 CDS YP_003632622.1 296125370 9141291 complement(409357..410391) 1 NC_014150.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bhy:BHWA1_00713 phosphoesterase, RecJ domain protein; phosphoesterase RecJ 410391 9141291 Bmur_0318 Brachyspira murdochii DSM 12563 phosphoesterase RecJ YP_003632622.1 409357 R 526224 CDS YP_003632623.1 296125371 9141292 complement(410420..410788) 1 NC_014150.1 KEGG: bhy:BHWA1_00714 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A 410788 9141292 Bmur_0319 Brachyspira murdochii DSM 12563 ribosome-binding factor A YP_003632623.1 410420 R 526224 CDS YP_003632624.1 296125372 9141293 complement(410794..411276) 1 NC_014150.1 KEGG: bhy:BHWA1_00715 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein; chemotaxis protein CheW 411276 9141293 Bmur_0320 Brachyspira murdochii DSM 12563 chemotaxis protein CheW YP_003632624.1 410794 R 526224 CDS YP_003632625.1 296125373 9141294 complement(411424..412725) 1 NC_014150.1 PFAM: protein of unknown function DUF1063; KEGG: cbb:CLD_2825 hypothetical protein; hypothetical protein 412725 9141294 Bmur_0321 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632625.1 411424 R 526224 CDS YP_003632626.1 296125374 9141295 complement(412822..413274) 1 NC_014150.1 KEGG: bhy:BHWA1_00523 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C 413274 9141295 Bmur_0322 Brachyspira murdochii DSM 12563 molybdenum cofactor biosynthesis protein C YP_003632626.1 412822 R 526224 CDS YP_003632627.1 296125375 9141296 complement(413296..414093) 1 NC_014150.1 KEGG: bhy:BHWA1_00524 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 414093 9141296 Bmur_0323 Brachyspira murdochii DSM 12563 radical SAM protein YP_003632627.1 413296 R 526224 CDS YP_003632628.1 296125376 9141297 complement(414077..415288) 1 NC_014150.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bhy:BHWA1_00525 molybdenum cofactor synthesis domain protein; SMART: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein 415288 9141297 Bmur_0324 Brachyspira murdochii DSM 12563 molybdenum cofactor synthesis domain-containing protein YP_003632628.1 414077 R 526224 CDS YP_003632629.1 296125377 9141298 complement(415327..416187) 1 NC_014150.1 KEGG: bhy:BHWA1_00526 dehydrogenase accessory protein; dehydrogenase accessory protein 416187 9141298 Bmur_0325 Brachyspira murdochii DSM 12563 dehydrogenase accessory protein YP_003632629.1 415327 R 526224 CDS YP_003632630.1 296125378 9141299 416354..416803 1 NC_014150.1 PFAM: MOSC domain containing protein; KEGG: bhy:BHWA1_00527 MOSC domain containing protein; MOSC domain-containing protein 416803 9141299 Bmur_0326 Brachyspira murdochii DSM 12563 MOSC domain-containing protein YP_003632630.1 416354 D 526224 CDS YP_003632631.1 296125379 9141300 416775..417251 1 NC_014150.1 KEGG: bhy:BHWA1_00528 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein 417251 9141300 Bmur_0327 Brachyspira murdochii DSM 12563 molybdenum cofactor synthesis domain-containing protein YP_003632631.1 416775 D 526224 CDS YP_003632632.1 296125380 9141301 417280..418062 1 NC_014150.1 KEGG: bhy:BHWA1_00529 ModA, ABC-type molybdate transport system, periplasmic component; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 418062 9141301 Bmur_0328 Brachyspira murdochii DSM 12563 molybdenum ABC transporter periplasmic molybdate-binding protein YP_003632632.1 417280 D 526224 CDS YP_003632633.1 296125381 9141302 418075..418755 1 NC_014150.1 KEGG: bhy:BHWA1_00530 ModC, ABC-type molybdate transport system, permease component; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit 418755 9141302 Bmur_0329 Brachyspira murdochii DSM 12563 molybdate ABC transporter inner membrane subunit YP_003632633.1 418075 D 526224 CDS YP_003632634.1 296125382 9141303 418752..419801 1 NC_014150.1 KEGG: bhy:BHWA1_00531 predicted transport protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 419801 9141303 Bmur_0330 Brachyspira murdochii DSM 12563 ABC transporter YP_003632634.1 418752 D 526224 CDS YP_003632635.1 296125383 9141304 complement(419865..421304) 1 NC_014150.1 KEGG: bhy:BHWA1_00074 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; dihydropyrimidinase 421304 9141304 Bmur_0331 Brachyspira murdochii DSM 12563 dihydropyrimidinase YP_003632635.1 419865 R 526224 CDS YP_003632636.1 296125384 9141305 complement(421452..421679) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 421679 9141305 Bmur_0332 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632636.1 421452 R 526224 CDS YP_003632637.1 296125385 9141306 complement(422918..424498) 1 NC_014150.1 PFAM: amidohydrolase; KEGG: bhy:BHWA1_00195 amidohydrolase 3; amidohydrolase 424498 9141306 Bmur_0333 Brachyspira murdochii DSM 12563 amidohydrolase YP_003632637.1 422918 R 526224 CDS YP_003632638.1 296125386 9141307 complement(424529..426349) 1 NC_014150.1 KEGG: bhy:BHWA1_00194 hypothetical ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 426349 9141307 Bmur_0334 Brachyspira murdochii DSM 12563 ABC transporter YP_003632638.1 424529 R 526224 CDS YP_003632639.1 296125387 9141308 complement(426451..427866) 1 NC_014150.1 KEGG: bhy:BHWA1_00193 UDP-N-acetylmuramoylalanine-- D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 427866 9141308 Bmur_0335 Brachyspira murdochii DSM 12563 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_003632639.1 426451 R 526224 CDS YP_003632640.1 296125388 9141310 complement(428851..429318) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 429318 9141310 Bmur_0337 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632640.1 428851 R 526224 CDS YP_003632641.1 296125389 9141311 complement(429432..429848) 1 NC_014150.1 KEGG: bhy:BHWA1_00191 hypothetical protein; hypothetical protein 429848 9141311 Bmur_0338 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632641.1 429432 R 526224 CDS YP_003632642.1 296125390 9141312 complement(429941..430822) 1 NC_014150.1 KEGG: bhy:BHWA1_00190 cation efflux system protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 430822 9141312 Bmur_0339 Brachyspira murdochii DSM 12563 cation diffusion facilitator family transporter YP_003632642.1 429941 R 526224 CDS YP_003632643.1 296125391 9141313 431081..431995 1 NC_014150.1 KEGG: bhy:BHWA1_00189 malonyl-CoA-[acyl-carrier- protein] transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-ACP transacylase 431995 9141313 Bmur_0340 Brachyspira murdochii DSM 12563 malonyl CoA-ACP transacylase YP_003632643.1 431081 D 526224 CDS YP_003632644.1 296125392 9141314 complement(432144..432707) 1 NC_014150.1 TIGRFAM: peroxiredoxin; KEGG: bhy:BHWA1_00188 alkyl hydrogen peroxide reductase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; peroxiredoxin 432707 9141314 Bmur_0341 Brachyspira murdochii DSM 12563 peroxiredoxin YP_003632644.1 432144 R 526224 CDS YP_003632645.1 296125393 9141315 432942..433511 1 NC_014150.1 KEGG: bhy:BHWA1_00328 HDIG domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 433511 9141315 Bmur_0342 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003632645.1 432942 D 526224 CDS YP_003632646.1 296125394 9141316 433765..434880 1 NC_014150.1 KEGG: bhy:BHWA1_00327 GTP-binding protein HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; GTP-binding protein HflX 434880 9141316 Bmur_0343 Brachyspira murdochii DSM 12563 GTP-binding protein HflX YP_003632646.1 433765 D 526224 CDS YP_003632647.1 296125395 9141317 complement(434885..435343) 1 NC_014150.1 PFAM: SCP-like extracellular; KEGG: bhy:BHWA1_00326 SCP-like extracellular protein; hypothetical protein 435343 9141317 Bmur_0344 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632647.1 434885 R 526224 CDS YP_003632648.1 296125396 9141318 complement(435417..437138) 1 NC_014150.1 KEGG: bhy:BHWA1_00325 site-specific DNA- methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; adenine-specific DNA-methyltransferase 437138 9141318 Bmur_0345 Brachyspira murdochii DSM 12563 adenine-specific DNA-methyltransferase YP_003632648.1 435417 R 526224 CDS YP_003632649.1 296125397 9141319 437317..439137 1 NC_014150.1 KEGG: bhy:BHWA1_00522 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 439137 9141319 Bmur_0346 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003632649.1 437317 D 526224 CDS YP_003632650.1 296125398 9141320 complement(439190..440554) 1 NC_014150.1 KEGG: bhy:BHWA1_00650 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 440554 9141320 Bmur_0347 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003632650.1 439190 R 526224 CDS YP_003632651.1 296125399 9141321 complement(440719..441726) 1 NC_014150.1 KEGG: bhy:BHWA1_00264 aldose 1-epimerase; PFAM: Aldose 1-epimerase; aldose 1-epimerase 441726 9141321 Bmur_0348 Brachyspira murdochii DSM 12563 aldose 1-epimerase YP_003632651.1 440719 R 526224 CDS YP_003632652.1 296125400 9141322 complement(442056..442451) 1 NC_014150.1 PFAM: protein of unknown function UPF0047; KEGG: bhy:BHWA1_00265 hypothetical protein; hypothetical protein 442451 9141322 Bmur_0349 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632652.1 442056 R 526224 CDS YP_003632653.1 296125401 9141323 442527..443039 1 NC_014150.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: bhy:BHWA1_00266 nitroimidazole resistance protein; pyridoxamine 5'-phosphate oxidase-related FMN- binding protein 443039 9141323 Bmur_0350 Brachyspira murdochii DSM 12563 pyridoxamine 5'-phosphate oxidase-related FMN- binding protein YP_003632653.1 442527 D 526224 CDS YP_003632654.1 296125402 9141324 443040..444428 1 NC_014150.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bhy:BHWA1_00267 peptidase; peptidase U62 444428 9141324 Bmur_0351 Brachyspira murdochii DSM 12563 peptidase U62 YP_003632654.1 443040 D 526224 CDS YP_003632655.1 296125403 9141325 444432..445790 1 NC_014150.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bhy:BHWA1_00268 peptidase; peptidase U62 445790 9141325 Bmur_0352 Brachyspira murdochii DSM 12563 peptidase U62 YP_003632655.1 444432 D 526224 CDS YP_003632656.1 296125404 9141326 complement(446359..447612) 1 NC_014150.1 KEGG: bhy:BHWA1_00772 tryptophan synthase beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta 447612 9141326 Bmur_0353 Brachyspira murdochii DSM 12563 tryptophan synthase subunit beta YP_003632656.1 446359 R 526224 CDS YP_003632657.1 296125405 9141327 447784..449838 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00771 TPR domain-containing protein; hypothetical protein 449838 9141327 Bmur_0354 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632657.1 447784 D 526224 CDS YP_003632658.1 296125406 9141328 449894..450391 1 NC_014150.1 KEGG: bhy:BHWA1_00770 hypothetical protein; hypothetical protein 450391 9141328 Bmur_0355 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632658.1 449894 D 526224 CDS YP_003632659.1 296125407 9141329 450410..450841 1 NC_014150.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bhy:BHWA1_02556 flavodoxin; flavodoxin/nitric oxide synthase 450841 9141329 Bmur_0356 Brachyspira murdochii DSM 12563 flavodoxin/nitric oxide synthase YP_003632659.1 450410 D 526224 CDS YP_003632660.1 296125408 9141330 complement(450954..453056) 1 NC_014150.1 PFAM: NHL repeat containing protein; KEGG: bhy:BHWA1_00661 NHL repeat containing protein; NHL repeat containing protein 453056 9141330 Bmur_0357 Brachyspira murdochii DSM 12563 NHL repeat containing protein YP_003632660.1 450954 R 526224 CDS YP_003632661.1 296125409 9141332 complement(453240..453983) 1 NC_014150.1 PFAM: lytic transglycosylase catalytic; KEGG: bhy:BHWA1_00664 lytic transglycosylase; lytic transglycosylase 453983 9141332 Bmur_0358 Brachyspira murdochii DSM 12563 lytic transglycosylase YP_003632661.1 453240 R 526224 CDS YP_003632662.1 296125410 9141333 complement(453995..454447) 1 NC_014150.1 TIGRFAM: flagellar export protein FliJ; KEGG: bhy:BHWA1_00665 hypothetical protein; flagellar export protein FliJ 454447 9141333 Bmur_0359 Brachyspira murdochii DSM 12563 flagellar export protein FliJ YP_003632662.1 453995 R 526224 CDS YP_003632663.1 296125411 9141334 complement(454479..455936) 1 NC_014150.1 SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family; KEGG: bhy:BHWA1_00666 flagellar biosynthesis/type III secretory pathway ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; FliI/YscN family ATPase 455936 9141334 Bmur_0360 Brachyspira murdochii DSM 12563 FliI/YscN family ATPase YP_003632663.1 454479 R 526224 CDS YP_003632664.1 296125412 9141335 complement(455974..456876) 1 NC_014150.1 PFAM: Flagellar assembly protein FliH/type III secretion system HrpE; KEGG: bhy:BHWA1_00667 flagellar assembly protein H; flagellar assembly protein FliH 456876 9141335 Bmur_0361 Brachyspira murdochii DSM 12563 flagellar assembly protein FliH YP_003632664.1 455974 R 526224 CDS YP_003632665.1 296125413 9141336 complement(456921..457952) 1 NC_014150.1 KEGG: bhy:BHWA1_00668 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 457952 9141336 Bmur_0362 Brachyspira murdochii DSM 12563 flagellar motor switch protein FliG YP_003632665.1 456921 R 526224 CDS YP_003632666.1 296125414 9141337 complement(458011..459714) 1 NC_014150.1 KEGG: bhy:BHWA1_00669 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: Flagellar M-ring domain protein; secretory protein YscJ/FliF family protein; flagellar M-ring protein FliF 459714 9141337 Bmur_0363 Brachyspira murdochii DSM 12563 flagellar M-ring protein FliF YP_003632666.1 458011 R 526224 CDS YP_003632667.1 296125415 9141338 complement(459945..460424) 1 NC_014150.1 PFAM: CinA domain protein; KEGG: bhy:BHWA1_00670 competence-damaged protein CinA; CinA domain-containing protein 460424 9141338 Bmur_0364 Brachyspira murdochii DSM 12563 CinA domain-containing protein YP_003632667.1 459945 R 526224 CDS YP_003632668.1 296125416 9141339 complement(461020..461811) 1 NC_014150.1 PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_00589 hypothetical protein; hypothetical protein 461811 9141339 Bmur_0365 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632668.1 461020 R 526224 CDS YP_003632669.1 296125417 9141340 complement(461836..462831) 1 NC_014150.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_00329 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 462831 9141340 Bmur_0366 Brachyspira murdochii DSM 12563 oligopeptide/dipeptide ABC transporter ATPase YP_003632669.1 461836 R 526224 CDS YP_003632670.1 296125418 9141341 462962..463171 1 NC_014150.1 KEGG: cation channel family protein; hypothetical protein 463171 9141341 Bmur_0367 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632670.1 462962 D 526224 CDS YP_003632671.1 296125419 9141342 463194..464642 1 NC_014150.1 KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein 464642 9141342 Bmur_0368 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632671.1 463194 D 526224 CDS YP_003632672.1 296125420 9141343 complement(464635..465594) 1 NC_014150.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_00330 oligopeptide/dipeptide ABC transporter, ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 465594 9141343 Bmur_0369 Brachyspira murdochii DSM 12563 oligopeptide/dipeptide ABC transporter ATPase YP_003632672.1 464635 R 526224 CDS YP_003632673.1 296125421 9141344 complement(465692..466141) 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00331 acetyltransferase, GT family; N-acetyltransferase GCN5 466141 9141344 Bmur_0370 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003632673.1 465692 R 526224 CDS YP_003632674.1 296125422 9141345 complement(466158..466517) 1 NC_014150.1 KEGG: bhy:BHWA1_00332 hypothetical protein; hypothetical protein 466517 9141345 Bmur_0371 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632674.1 466158 R 526224 CDS YP_003632675.1 296125423 9141346 466658..467401 1 NC_014150.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bhy:BHWA1_00333 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 467401 9141346 Bmur_0372 Brachyspira murdochii DSM 12563 ErfK/YbiS/YcfS/YnhG family protein YP_003632675.1 466658 D 526224 CDS YP_003632676.1 296125424 9141347 467468..468448 1 NC_014150.1 KEGG: bhy:BHWA1_00334 hypothetical hypothetical protein; hypothetical protein 468448 9141347 Bmur_0373 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632676.1 467468 D 526224 CDS YP_003632677.1 296125425 9141348 468503..468952 1 NC_014150.1 PFAM: protein of unknown function UPF0079; KEGG: bhy:BHWA1_00335 nucleotide-binding protein; hypothetical protein 468952 9141348 Bmur_0374 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632677.1 468503 D 526224 CDS YP_003632678.1 296125426 9141349 468949..469980 1 NC_014150.1 KEGG: bhy:BHWA1_00336 hypothetical protein; hypothetical protein 469980 9141349 Bmur_0375 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632678.1 468949 D 526224 CDS YP_003632679.1 296125427 9141350 469996..471390 1 NC_014150.1 KEGG: bhy:BHWA1_00337 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP- binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE 471390 9141350 Bmur_0376 Brachyspira murdochii DSM 12563 tRNA modification GTPase TrmE YP_003632679.1 469996 D 526224 CDS YP_003632680.1 296125428 9141351 471522..472247 1 NC_014150.1 KEGG: bhy:BHWA1_00338 hypothetical protein; hypothetical protein 472247 9141351 Bmur_0377 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632680.1 471522 D 526224 CDS YP_003632681.1 296125429 9141352 complement(472275..473471) 1 NC_014150.1 PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_02646 cAMP-binding protein; Crp/Fnr family transcriptional regulator 473471 9141352 Bmur_0378 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003632681.1 472275 R 526224 CDS YP_003632682.1 296125430 9141353 complement(473602..474894) 1 NC_014150.1 KEGG: bhy:BHWA1_00426 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; adenylosuccinate lyase 474894 9141353 Bmur_0379 Brachyspira murdochii DSM 12563 adenylosuccinate lyase YP_003632682.1 473602 R 526224 CDS YP_003632683.1 296125431 9141354 475065..476081 1 NC_014150.1 KEGG: bhy:BHWA1_00425 L-allo-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 476081 9141354 Bmur_0380 Brachyspira murdochii DSM 12563 threonine aldolase YP_003632683.1 475065 D 526224 CDS YP_003632684.1 296125432 9141356 complement(478095..478991) 1 NC_014150.1 PFAM: methyltransferase type 11; KEGG: bhy:BHWA1_00423 methyltransferase; methyltransferase type 11 478991 9141356 Bmur_0382 Brachyspira murdochii DSM 12563 methyltransferase type 11 YP_003632684.1 478095 R 526224 CDS YP_003632685.1 296125433 9141357 complement(479014..480510) 1 NC_014150.1 KEGG: bhy:BHWA1_00422 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; NusA antitermination factor 480510 9141357 Bmur_0383 Brachyspira murdochii DSM 12563 NusA antitermination factor YP_003632685.1 479014 R 526224 CDS YP_003632686.1 296125434 9141358 complement(480553..481119) 1 NC_014150.1 KEGG: bhy:BHWA1_00421 hypothetical protein; hypothetical protein 481119 9141358 Bmur_0384 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632686.1 480553 R 526224 CDS YP_003632687.1 296125435 9141359 481363..482889 1 NC_014150.1 KEGG: bhy:BHWA1_00420 cardiolipin synthase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; phospholipase D 482889 9141359 Bmur_0385 Brachyspira murdochii DSM 12563 phospholipase D YP_003632687.1 481363 D 526224 CDS YP_003632688.1 296125436 9141360 482918..483862 1 NC_014150.1 KEGG: bhy:BHWA1_00419 hypothetical protein; hypothetical protein 483862 9141360 Bmur_0386 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632688.1 482918 D 526224 CDS YP_003632689.1 296125437 9141361 complement(483952..485805) 1 NC_014150.1 KEGG: bhy:BHWA1_00417 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 485805 9141361 Bmur_0387 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003632689.1 483952 R 526224 CDS YP_003632690.1 296125438 9141362 486047..487330 1 NC_014150.1 KEGG: bhy:BHWA1_00416 galactokinase; PFAM: GHMP kinase; Galactokinase galactose-binding domain; galactokinase 487330 9141362 Bmur_0388 Brachyspira murdochii DSM 12563 galactokinase YP_003632690.1 486047 D 526224 CDS YP_003632691.1 296125439 9141363 complement(487464..489200) 1 NC_014150.1 PFAM: protein of unknown function DUF342; KEGG: bhy:BHWA1_00414 predicted polymerase; hypothetical protein 489200 9141363 Bmur_0389 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632691.1 487464 R 526224 CDS YP_003632692.1 296125440 9141364 complement(489234..490037) 1 NC_014150.1 PFAM: methyltransferase type 11; KEGG: bhy:BHWA1_00413 methyltransferase; methyltransferase type 11 490037 9141364 Bmur_0390 Brachyspira murdochii DSM 12563 methyltransferase type 11 YP_003632692.1 489234 R 526224 CDS YP_003632693.1 296125441 9141365 complement(490103..490846) 1 NC_014150.1 PFAM: PASTA domain containing protein; KEGG: bhy:BHWA1_00412 PASTA domain containing protein; PASTA domain-containing protein 490846 9141365 Bmur_0391 Brachyspira murdochii DSM 12563 PASTA domain-containing protein YP_003632693.1 490103 R 526224 CDS YP_003632694.1 296125442 9141366 complement(490868..491806) 1 NC_014150.1 PFAM: formyl transferase domain protein; KEGG: bhy:BHWA1_00411 methionyl-tRNA formyltransferase; formyl transferase domain-containing protein 491806 9141366 Bmur_0392 Brachyspira murdochii DSM 12563 formyl transferase domain-containing protein YP_003632694.1 490868 R 526224 CDS YP_003632695.1 296125443 9141367 complement(491868..493316) 1 NC_014150.1 KEGG: bhy:BHWA1_00410 hypothetical protein; hypothetical protein 493316 9141367 Bmur_0393 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632695.1 491868 R 526224 CDS YP_003632696.1 296125444 9141368 complement(493342..493959) 1 NC_014150.1 KEGG: bhy:BHWA1_00409 hypothetical protein; hypothetical protein 493959 9141368 Bmur_0394 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632696.1 493342 R 526224 CDS YP_003632697.1 296125445 9141369 complement(494033..495955) 1 NC_014150.1 SMART: ankyrin; KEGG: bhy:BHWA1_00408 ankyrin repeat-containing protein; ankyrin 495955 9141369 Bmur_0395 Brachyspira murdochii DSM 12563 ankyrin YP_003632697.1 494033 R 526224 CDS YP_003632698.1 296125446 9141370 complement(496051..498657) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_00407 solute binding protein-like protein; ABC transporter substrate-binding protein 498657 9141370 Bmur_0396 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003632698.1 496051 R 526224 CDS YP_003632699.1 296125447 9141371 complement(498843..499796) 1 NC_014150.1 KEGG: bhy:BHWA1_00994 hypothetical protein; hypothetical protein 499796 9141371 Bmur_0397 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632699.1 498843 R 526224 CDS YP_003632700.1 296125448 9141372 complement(499967..500461) 1 NC_014150.1 KEGG: bhy:BHWA1_00312 hypothetical protein; hypothetical protein 500461 9141372 Bmur_0398 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632700.1 499967 R 526224 CDS YP_003632701.1 296125449 9141373 complement(500474..501874) 1 NC_014150.1 KEGG: bhy:BHWA1_00313 hypothetical protein; hypothetical protein 501874 9141373 Bmur_0399 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632701.1 500474 R 526224 CDS YP_003632702.1 296125450 9141374 502026..502697 1 NC_014150.1 PFAM: YheO domain protein; KEGG: bhy:BHWA1_00314 hypothetical protein; hypothetical protein 502697 9141374 Bmur_0400 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632702.1 502026 D 526224 CDS YP_003632703.1 296125451 9141375 complement(502843..503775) 1 NC_014150.1 PFAM: integrase; integrase domain protein SAM domain protein; KEGG: bhy:BHWA1_00315 tyrosine recombinase XerD; integrase 503775 9141375 Bmur_0401 Brachyspira murdochii DSM 12563 integrase YP_003632703.1 502843 R 526224 CDS YP_003632704.1 296125452 9141376 504016..505104 1 NC_014150.1 KEGG: bhy:BHWA1_00316 hypothetical protein; hypothetical protein 505104 9141376 Bmur_0402 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632704.1 504016 D 526224 CDS YP_003632705.1 296125453 9141377 505259..506029 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00318 taurine ABC transporter permease; binding-protein-dependent transport system inner membrane protein 506029 9141377 Bmur_0403 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003632705.1 505259 D 526224 CDS YP_003632706.1 296125454 9141378 506056..506841 1 NC_014150.1 KEGG: bhy:BHWA1_00319 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 506841 9141378 Bmur_0404 Brachyspira murdochii DSM 12563 ABC transporter YP_003632706.1 506056 D 526224 CDS YP_003632707.1 296125455 9141379 506904..507899 1 NC_014150.1 KEGG: bhy:BHWA1_00321 ABC-type nitrate/sulfonate/bicarbonate transport system; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; aliphatic sulfonates ABC transporter periplasmic protein 507899 9141379 Bmur_0405 Brachyspira murdochii DSM 12563 aliphatic sulfonates ABC transporter periplasmic protein YP_003632707.1 506904 D 526224 CDS YP_003632708.1 296125456 9141380 508054..509058 1 NC_014150.1 PFAM: NMT1/THI5 like domain protein; KEGG: bhy:BHWA1_00322 ABC-type nitrate/sulfonate/bicarbonate transport system; nitrate/sulfonate/bicarbonate ABC transporter 509058 9141380 Bmur_0406 Brachyspira murdochii DSM 12563 nitrate/sulfonate/bicarbonate ABC transporter YP_003632708.1 508054 D 526224 CDS YP_003632709.1 296125457 9141381 509151..510344 1 NC_014150.1 PFAM: ROK family protein; KEGG: bhy:BHWA1_00324 transcriptional repressor of the xylose operon; ROK family protein 510344 9141381 Bmur_0407 Brachyspira murdochii DSM 12563 ROK family protein YP_003632709.1 509151 D 526224 CDS YP_003632710.1 296125458 9141382 complement(510333..511262) 1 NC_014150.1 KEGG: bhy:BHWA1_00311 UDP-N- acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 511262 9141382 Bmur_0408 Brachyspira murdochii DSM 12563 UDP-N-acetylenolpyruvoylglucosamine reductase YP_003632710.1 510333 R 526224 CDS YP_003632711.1 296125459 9141383 complement(511231..512619) 1 NC_014150.1 KEGG: bhy:BHWA1_00310 UDP-N-acetylmuramate--alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase 512619 9141383 Bmur_0409 Brachyspira murdochii DSM 12563 UDP-N-acetylmuramate--L-alanine ligase YP_003632711.1 511231 R 526224 CDS YP_003632712.1 296125460 9141384 complement(512676..513749) 1 NC_014150.1 KEGG: bhy:BHWA1_00309 N-acetylglucosaminyl transferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase 28; UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 513749 9141384 Bmur_0410 Brachyspira murdochii DSM 12563 UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_003632712.1 512676 R 526224 CDS YP_003632713.1 296125461 9141385 complement(513746..514840) 1 NC_014150.1 PFAM: cell cycle protein; KEGG: bhy:BHWA1_00308 cell cycle protein; cell cycle protein 514840 9141385 Bmur_0411 Brachyspira murdochii DSM 12563 cell cycle protein YP_003632713.1 513746 R 526224 CDS YP_003632714.1 296125462 9141386 complement(514867..515751) 1 NC_014150.1 KEGG: bhy:BHWA1_00307 toxin A; toxin A 515751 9141386 Bmur_0412 Brachyspira murdochii DSM 12563 toxin A YP_003632714.1 514867 R 526224 CDS YP_003632715.1 296125463 9141387 515900..516928 1 NC_014150.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; KEGG: bhy:BHWA1_00306 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 516928 9141387 Bmur_0413 Brachyspira murdochii DSM 12563 diguanylate cyclase YP_003632715.1 515900 D 526224 CDS YP_003632716.1 296125464 9141388 complement(517161..518168) 1 NC_014150.1 TIGRFAM: phosphate acetyltransferase; KEGG: bhy:BHWA1_00305 phosphotransacetylase; PFAM: phosphate acetyl/butaryl transferase; phosphate acetyltransferase 518168 9141388 Bmur_0414 Brachyspira murdochii DSM 12563 phosphate acetyltransferase YP_003632716.1 517161 R 526224 CDS YP_003632717.1 296125465 9141389 complement(518343..519113) 1 NC_014150.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01124 conserved hypothetical protein containing a ferredoxin domain; 4Fe-4S ferredoxin 519113 9141389 Bmur_0415 Brachyspira murdochii DSM 12563 4Fe-4S ferredoxin YP_003632717.1 518343 R 526224 CDS YP_003632718.1 296125466 9141390 complement(519251..520393) 1 NC_014150.1 KEGG: pac:PPA0632 glycine amidinotransferase; PFAM: amidinotransferase; glycine amidinotransferase 520393 9141390 Bmur_0416 Brachyspira murdochii DSM 12563 glycine amidinotransferase YP_003632718.1 519251 R 526224 CDS YP_003632719.1 296125467 9141391 complement(520713..521591) 1 NC_014150.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_00304 permease of the drug/metabolite transporter (DMT); hypothetical protein 521591 9141391 Bmur_0417 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632719.1 520713 R 526224 CDS YP_003632720.1 296125468 9141392 complement(521682..523316) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00303 ankyrin repeat-containing protein; ankyrin 523316 9141392 Bmur_0418 Brachyspira murdochii DSM 12563 ankyrin YP_003632720.1 521682 R 526224 CDS YP_003632721.1 296125469 9141393 complement(523476..524843) 1 NC_014150.1 TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; KEGG: bhy:BHWA1_00302 magnesium transporter; SMART: CBS domain containing protein; magnesium transporter 524843 9141393 Bmur_0419 Brachyspira murdochii DSM 12563 magnesium transporter YP_003632721.1 523476 R 526224 CDS YP_003632722.1 296125470 9141394 complement(524898..525566) 1 NC_014150.1 KEGG: bhy:BHWA1_00301 hypothetical protein; hypothetical protein 525566 9141394 Bmur_0420 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632722.1 524898 R 526224 CDS YP_003632723.1 296125471 9141395 525730..527889 1 NC_014150.1 KEGG: bhy:BHWA1_00717 hypothetical protein; hypothetical protein 527889 9141395 Bmur_0421 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632723.1 525730 D 526224 CDS YP_003632724.1 296125472 9141396 528000..529367 1 NC_014150.1 PFAM: protein of unknown function DUF88; KEGG: bhy:BHWA1_00718 hypothetical protein; hypothetical protein 529367 9141396 Bmur_0422 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632724.1 528000 D 526224 CDS YP_003632725.1 296125473 9141397 529398..530261 1 NC_014150.1 PFAM: Prephenate dehydrogenase; KEGG: bhy:BHWA1_00719 prephenate dehydrogenase; prephenate dehydrogenase 530261 9141397 Bmur_0423 Brachyspira murdochii DSM 12563 prephenate dehydrogenase YP_003632725.1 529398 D 526224 CDS YP_003632726.1 296125474 9141398 530529..532526 1 NC_014150.1 TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; KEGG: bhy:BHWA1_00659 VacB, exoribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; VacB and RNase II family 3'-5' exoribonuclease 532526 9141398 Bmur_0424 Brachyspira murdochii DSM 12563 VacB and RNase II family 3'-5' exoribonuclease YP_003632726.1 530529 D 526224 CDS YP_003632727.1 296125475 9141399 complement(532945..533676) 1 NC_014150.1 KEGG: bhy:BHWA1_00773 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; signal peptidase I 533676 9141399 Bmur_0425 Brachyspira murdochii DSM 12563 signal peptidase I YP_003632727.1 532945 R 526224 CDS YP_003632728.1 296125476 9141400 complement(533704..534024) 1 NC_014150.1 KEGG: bhy:BHWA1_00774 Glu-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 534024 9141400 Bmur_0426 Brachyspira murdochii DSM 12563 glutamyl-tRNA(Gln) amidotransferase subunit C YP_003632728.1 533704 R 526224 CDS YP_003632729.1 296125477 9141401 complement(534142..534768) 1 NC_014150.1 PFAM: sugar isomerase (SIS); KEGG: bhy:BHWA1_00296 phosphoheptose isomerase; sugar isomerase 534768 9141401 Bmur_0427 Brachyspira murdochii DSM 12563 sugar isomerase YP_003632729.1 534142 R 526224 CDS YP_003632730.1 296125478 9141402 complement(534802..535470) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00295 ankyrin repeat-containing protein; ankyrin 535470 9141402 Bmur_0428 Brachyspira murdochii DSM 12563 ankyrin YP_003632730.1 534802 R 526224 CDS YP_003632731.1 296125479 9141403 complement(535593..536321) 1 NC_014150.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bhy:BHWA1_00294 3-ketoacyl-(acyl-carrier- protein) reductase; short-chain dehydrogenase/reductase SDR 536321 9141403 Bmur_0429 Brachyspira murdochii DSM 12563 short-chain dehydrogenase/reductase SDR YP_003632731.1 535593 R 526224 CDS YP_003632732.1 296125480 9141404 complement(536354..536851) 1 NC_014150.1 KEGG: bhy:BHWA1_00293 FabA FabZ, FabA/Z, beta- hydroxyacyl-acyl carrier protein (ACP)-dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase 536851 9141404 Bmur_0430 Brachyspira murdochii DSM 12563 (3R)-hydroxymyristoyl-ACP dehydratase YP_003632732.1 536354 R 526224 CDS YP_003632733.1 296125481 9141405 complement(536883..538055) 1 NC_014150.1 PFAM: beta-ketoacyl synthase; KEGG: bhy:BHWA1_00292 3-oxoacyl-(acyl carrier protein) synthase I; beta-ketoacyl synthase 538055 9141405 Bmur_0431 Brachyspira murdochii DSM 12563 beta-ketoacyl synthase YP_003632733.1 536883 R 526224 CDS YP_003632734.1 296125482 9141406 complement(538138..540417) 1 NC_014150.1 KEGG: bhy:BHWA1_00291 hypothetical hypothetical protein; hypothetical protein 540417 9141406 Bmur_0432 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632734.1 538138 R 526224 CDS YP_003632735.1 296125483 9141407 complement(540404..540982) 1 NC_014150.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bhy:BHWA1_00290 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 540982 9141407 Bmur_0433 Brachyspira murdochii DSM 12563 outer membrane lipoprotein carrier protein LolA YP_003632735.1 540404 R 526224 CDS YP_003632736.1 296125484 9141408 complement(541064..541504) 1 NC_014150.1 PFAM: thioesterase; KEGG: bhy:BHWA1_00289 esterase; thioesterase 541504 9141408 Bmur_0434 Brachyspira murdochii DSM 12563 thioesterase YP_003632736.1 541064 R 526224 CDS YP_003632737.1 296125485 9141409 complement(541508..542470) 1 NC_014150.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: bhy:BHWA1_00288 glycosyl transferase, family 2; lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 542470 9141409 Bmur_0435 Brachyspira murdochii DSM 12563 lipid A biosynthesis acyltransferase YP_003632737.1 541508 R 526224 CDS YP_003632738.1 296125486 9141410 complement(542482..542826) 1 NC_014150.1 KEGG: bhy:BHWA1_00287 beta-hydroxyacyl-(acyl- carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 542826 9141410 Bmur_0436 Brachyspira murdochii DSM 12563 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_003632738.1 542482 R 526224 CDS YP_003632739.1 296125487 9141411 complement(542828..544174) 1 NC_014150.1 KEGG: bhy:BHWA1_00286 AMP-binding enzyme; AMP-binding protein 544174 9141411 Bmur_0437 Brachyspira murdochii DSM 12563 AMP-binding protein YP_003632739.1 542828 R 526224 CDS YP_003632740.1 296125488 9141412 complement(544191..544451) 1 NC_014150.1 PFAM: phosphopantetheine-binding; KEGG: bhy:BHWA1_00285 acyl carrier protein; phosphopantetheine-binding protein 544451 9141412 Bmur_0438 Brachyspira murdochii DSM 12563 phosphopantetheine-binding protein YP_003632740.1 544191 R 526224 CDS YP_003632741.1 296125489 9141413 complement(544503..545210) 1 NC_014150.1 KEGG: bhy:BHWA1_00284 hypothetical protein; hypothetical protein 545210 9141413 Bmur_0439 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632741.1 544503 R 526224 CDS YP_003632742.1 296125490 9141414 545598..545987 1 NC_014150.1 KEGG: bhy:BHWA1_00283 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; MerR family transcriptional regulator 545987 9141414 Bmur_0440 Brachyspira murdochii DSM 12563 MerR family transcriptional regulator YP_003632742.1 545598 D 526224 CDS YP_003632743.1 296125491 9141415 546000..546470 1 NC_014150.1 KEGG: bhy:BHWA1_00282 hypothetical protein; hypothetical protein 546470 9141415 Bmur_0441 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632743.1 546000 D 526224 CDS YP_003632744.1 296125492 9141416 546657..547502 1 NC_014150.1 KEGG: bhy:BHWA1_00281 oxidoreductase, aldo/keto reductase; PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 547502 9141416 Bmur_0442 Brachyspira murdochii DSM 12563 2,5-didehydrogluconate reductase YP_003632744.1 546657 D 526224 CDS YP_003632745.1 296125493 9141417 547695..548525 1 NC_014150.1 PFAM: aldo/keto reductase; KEGG: bhy:BHWA1_00280 oxidoreductase, aldo/keto reductase; aldo/keto reductase 548525 9141417 Bmur_0443 Brachyspira murdochii DSM 12563 aldo/keto reductase YP_003632745.1 547695 D 526224 CDS YP_003632746.1 296125494 9141418 548953..549930 1 NC_014150.1 PFAM: aldo/keto reductase; KEGG: rfr:Rfer_2445 aldo/keto reductase; aldo/keto reductase 549930 9141418 Bmur_0444 Brachyspira murdochii DSM 12563 aldo/keto reductase YP_003632746.1 548953 D 526224 CDS YP_003632747.1 296125495 9141419 550247..550756 1 NC_014150.1 KEGG: bhy:BHWA1_00279 flavodoxin; flavodoxin 550756 9141419 Bmur_0445 Brachyspira murdochii DSM 12563 flavodoxin YP_003632747.1 550247 D 526224 CDS YP_003632748.1 296125496 9141420 550791..551240 1 NC_014150.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_00278 hypothetical protein; cupin 551240 9141420 Bmur_0446 Brachyspira murdochii DSM 12563 cupin YP_003632748.1 550791 D 526224 CDS YP_003632749.1 296125497 9141421 551344..552813 1 NC_014150.1 PFAM: protein of unknown function DUF323; KEGG: fsu:Fisuc_1693 protein of unknown function DUF323; hypothetical protein 552813 9141421 Bmur_0447 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632749.1 551344 D 526224 CDS YP_003632750.1 296125498 9141422 552937..553605 1 NC_014150.1 KEGG: bhy:BHWA1_01747 hypothetical protein; hypothetical protein 553605 9141422 Bmur_0448 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632750.1 552937 D 526224 CDS YP_003632751.1 296125499 9141423 complement(553602..554495) 1 NC_014150.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: bhy:BHWA1_00647 transcriptional regulator, LysR family; LysR family transcriptional regulator 554495 9141423 Bmur_0449 Brachyspira murdochii DSM 12563 LysR family transcriptional regulator YP_003632751.1 553602 R 526224 CDS YP_003632752.1 296125500 9141424 554653..555003 1 NC_014150.1 KEGG: bhy:BHWA1_00648 regulatory protein, MerR; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 555003 9141424 Bmur_0450 Brachyspira murdochii DSM 12563 MerR family transcriptional regulator YP_003632752.1 554653 D 526224 CDS YP_003632753.1 296125501 9141425 complement(555068..556261) 1 NC_014150.1 PFAM: (uracil-5)-methyltransferase; KEGG: bhy:BHWA1_00680 RNA methyltransferase, TrmA family; (uracil-5)-methyltransferase 556261 9141425 Bmur_0451 Brachyspira murdochii DSM 12563 (uracil-5)-methyltransferase YP_003632753.1 555068 R 526224 CDS YP_003632754.1 296125502 9141426 complement(556765..558045) 1 NC_014150.1 KEGG: bhy:BHWA1_00682 Eis, predicted acetyltransferase-like acetyltransferase; acetyltransferase 558045 9141426 Bmur_0452 Brachyspira murdochii DSM 12563 acetyltransferase YP_003632754.1 556765 R 526224 CDS YP_003632755.1 296125503 9141427 complement(558091..558921) 1 NC_014150.1 KEGG: bhy:BHWA1_00683 hypothetical protein; hypothetical protein 558921 9141427 Bmur_0453 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632755.1 558091 R 526224 CDS YP_003632756.1 296125504 9141428 complement(558956..559825) 1 NC_014150.1 KEGG: bhy:BHWA1_00684 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 559825 9141428 Bmur_0454 Brachyspira murdochii DSM 12563 ankyrin YP_003632756.1 558956 R 526224 CDS YP_003632757.1 296125505 9141429 560082..561332 1 NC_014150.1 KEGG: bhy:BHWA1_00685 hypothetical protein; hypothetical protein 561332 9141429 Bmur_0455 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632757.1 560082 D 526224 CDS YP_003632758.1 296125506 9141430 561417..562562 1 NC_014150.1 SMART: PUA domain containing protein; TIGRFAM: glutamate 5-kinase; KEGG: bhy:BHWA1_00686 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; glutamate 5-kinase 562562 9141430 Bmur_0456 Brachyspira murdochii DSM 12563 glutamate 5-kinase YP_003632758.1 561417 D 526224 CDS YP_003632759.1 296125507 9141431 complement(562557..563558) 1 NC_014150.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: bhy:BHWA1_00687 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase 563558 9141431 Bmur_0457 Brachyspira murdochii DSM 12563 galactose-1-phosphate uridylyltransferase YP_003632759.1 562557 R 526224 CDS YP_003632760.1 296125508 9141432 complement(563564..563926) 1 NC_014150.1 KEGG: bhy:BHWA1_00688 REC, signal receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 563926 9141432 Bmur_0458 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003632760.1 563564 R 526224 CDS YP_003632761.1 296125509 9141433 complement(564061..564852) 1 NC_014150.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: bhy:BHWA1_00689 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 564852 9141433 Bmur_0459 Brachyspira murdochii DSM 12563 pyrroline-5-carboxylate reductase YP_003632761.1 564061 R 526224 CDS YP_003632762.1 296125510 9141434 complement(564945..565361) 1 NC_014150.1 PFAM: thioesterase; KEGG: bhy:BHWA1_00013 thioesterase; thioesterase 565361 9141434 Bmur_0460 Brachyspira murdochii DSM 12563 thioesterase YP_003632762.1 564945 R 526224 CDS YP_003632763.1 296125511 9141435 complement(565712..567100) 1 NC_014150.1 PFAM: sodium:neurotransmitter symporter; KEGG: bhy:BHWA1_00012 sodium/chloride-dependent transporter; sodium:neurotransmitter symporter 567100 9141435 Bmur_0461 Brachyspira murdochii DSM 12563 sodium:neurotransmitter symporter YP_003632763.1 565712 R 526224 CDS YP_003632764.1 296125512 9141436 complement(567267..568700) 1 NC_014150.1 TIGRFAM: pyruvate kinase; KEGG: bhy:BHWA1_00011 pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta; pyruvate kinase 568700 9141436 Bmur_0462 Brachyspira murdochii DSM 12563 pyruvate kinase YP_003632764.1 567267 R 526224 CDS YP_003632765.1 296125513 9141437 568851..569423 1 NC_014150.1 KEGG: bhy:BHWA1_00010 hypothetical protein; hypothetical protein 569423 9141437 Bmur_0463 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632765.1 568851 D 526224 CDS YP_003632766.1 296125514 9141438 complement(569420..570268) 1 NC_014150.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: bhy:BHWA1_00009 dimethyladenosine transferase; SMART: ribosomal RNA adenine methylase transferase- like; dimethyladenosine transferase 570268 9141438 Bmur_0464 Brachyspira murdochii DSM 12563 dimethyladenosine transferase YP_003632766.1 569420 R 526224 CDS YP_003632767.1 296125515 9141439 complement(570258..571985) 1 NC_014150.1 KEGG: bhy:BHWA1_00008 hypothetical protein; hypothetical protein 571985 9141439 Bmur_0465 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632767.1 570258 R 526224 CDS YP_003632768.1 296125516 9141440 complement(571982..572428) 1 NC_014150.1 KEGG: bhy:BHWA1_00007 response regulator aspartate phosphatase containing TPR repeat domain; response regulator aspartate phosphatase containing TPR repeat domain-containing protein 572428 9141440 Bmur_0466 Brachyspira murdochii DSM 12563 response regulator aspartate phosphatase containing TPR repeat domain-containing protein YP_003632768.1 571982 R 526224 CDS YP_003632769.1 296125517 9141441 complement(572428..572733) 1 NC_014150.1 KEGG: bhy:BHWA1_00006 hypothetical protein; hypothetical protein 572733 9141441 Bmur_0467 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632769.1 572428 R 526224 CDS YP_003632770.1 296125518 9141442 572939..573601 1 NC_014150.1 KEGG: bhy:BHWA1_00005 hypothetical protein; hypothetical protein 573601 9141442 Bmur_0468 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632770.1 572939 D 526224 CDS YP_003632771.1 296125519 9141443 573619..574365 1 NC_014150.1 KEGG: bhy:BHWA1_00004 hypothetical protein; hypothetical protein 574365 9141443 Bmur_0469 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632771.1 573619 D 526224 CDS YP_003632772.1 296125520 9141444 complement(574379..575233) 1 NC_014150.1 KEGG: bhy:BHWA1_00003 permease; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; RarD protein, DMT superfamily transporter 575233 9141444 Bmur_0470 Brachyspira murdochii DSM 12563 RarD protein, DMT superfamily transporter YP_003632772.1 574379 R 526224 CDS YP_003632773.1 296125521 9141445 complement(575346..576095) 1 NC_014150.1 KEGG: bhy:BHWA1_00208 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 576095 9141445 Bmur_0471 Brachyspira murdochii DSM 12563 ankyrin YP_003632773.1 575346 R 526224 CDS YP_003632774.1 296125522 9141446 complement(576260..577294) 1 NC_014150.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bhy:BHWA1_00250 DH:flavin oxidoreductase/DH oxidase; NADH:flavin oxidoreductase 577294 9141446 Bmur_0472 Brachyspira murdochii DSM 12563 NADH:flavin oxidoreductase YP_003632774.1 576260 R 526224 CDS YP_003632775.1 296125523 9141447 complement(577529..577888) 1 NC_014150.1 KEGG: bhy:BHWA1_00179 hypothetical protein; hypothetical protein 577888 9141447 Bmur_0473 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632775.1 577529 R 526224 CDS YP_003632776.1 296125524 9141448 complement(577967..580573) 1 NC_014150.1 SMART: ankyrin; KEGG: bhy:BHWA1_00249 ankyrin repeat-containing protein; ankyrin 580573 9141448 Bmur_0474 Brachyspira murdochii DSM 12563 ankyrin YP_003632776.1 577967 R 526224 CDS YP_003632777.1 296125525 9141449 complement(580671..582041) 1 NC_014150.1 KEGG: bhy:BHWA1_00248 ankyrin repeat-containing protein; ankyrin repeat-containing protein 582041 9141449 Bmur_0475 Brachyspira murdochii DSM 12563 ankyrin repeat-containing protein YP_003632777.1 580671 R 526224 CDS YP_003632778.1 296125526 9141450 complement(582093..585017) 1 NC_014150.1 KEGG: bhy:BHWA1_00247 hypothetical protein; hypothetical protein 585017 9141450 Bmur_0476 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632778.1 582093 R 526224 CDS YP_003632779.1 296125527 9141451 complement(585045..586235) 1 NC_014150.1 TIGRFAM: tyrosyl-tRNA synthetase; KEGG: bhy:BHWA1_00246 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tyrosyl-tRNA synthetase 586235 9141451 Bmur_0477 Brachyspira murdochii DSM 12563 tyrosyl-tRNA synthetase YP_003632779.1 585045 R 526224 CDS YP_003632780.1 296125528 9141452 complement(586394..587473) 1 NC_014150.1 PFAM: peptidase M24; creatinase; KEGG: bhy:BHWA1_00720 Xaa-Pro aminopeptidase; peptidase M24 587473 9141452 Bmur_0478 Brachyspira murdochii DSM 12563 peptidase M24 YP_003632780.1 586394 R 526224 CDS YP_003632781.1 296125529 9141453 587705..588145 1 NC_014150.1 KEGG: bhy:BHWA1_00617 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 588145 9141453 Bmur_0479 Brachyspira murdochii DSM 12563 3-dehydroquinate dehydratase YP_003632781.1 587705 D 526224 CDS YP_003632782.1 296125530 9141454 588164..589279 1 NC_014150.1 PFAM: peptidase M24; creatinase; KEGG: bhy:BHWA1_00618 PepP, Xaa-Pro aminopeptidase; peptidase M24 589279 9141454 Bmur_0480 Brachyspira murdochii DSM 12563 peptidase M24 YP_003632782.1 588164 D 526224 CDS YP_003632783.1 296125531 9141455 589376..589969 1 NC_014150.1 PFAM: Domain of unknown function DUF1994; KEGG: bhy:BHWA1_00733 hypothetical protein; hypothetical protein 589969 9141455 Bmur_0481 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632783.1 589376 D 526224 CDS YP_003632784.1 296125532 9141456 complement(589973..590302) 1 NC_014150.1 KEGG: bhy:BHWA1_00024 hypothetical protein; hypothetical protein 590302 9141456 Bmur_0482 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632784.1 589973 R 526224 CDS YP_003632785.1 296125533 9141457 complement(590312..590602) 1 NC_014150.1 KEGG: bhy:BHWA1_00023 hypothetical protein; hypothetical protein 590602 9141457 Bmur_0483 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632785.1 590312 R 526224 CDS YP_003632786.1 296125534 9141458 complement(590647..591654) 1 NC_014150.1 PFAM: aminodeoxychorismate lyase; KEGG: bhy:BHWA1_00450 aminodeoxychorismate lyase; aminodeoxychorismate lyase 591654 9141458 Bmur_0484 Brachyspira murdochii DSM 12563 aminodeoxychorismate lyase YP_003632786.1 590647 R 526224 CDS YP_003632787.1 296125535 9141459 complement(591728..592975) 1 NC_014150.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: bhy:BHWA1_00451 histidyl-tRNA synthetase, class IIa; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 592975 9141459 Bmur_0485 Brachyspira murdochii DSM 12563 histidyl-tRNA synthetase YP_003632787.1 591728 R 526224 CDS YP_003632788.1 296125536 9141460 complement(592993..595110) 1 NC_014150.1 KEGG: bhy:BHWA1_00452 hypothetical protein; hypothetical protein 595110 9141460 Bmur_0486 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632788.1 592993 R 526224 CDS YP_003632789.1 296125537 9141461 complement(595244..597061) 1 NC_014150.1 KEGG: bhy:BHWA1_00362 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 3; elongation factor Tu domain 2 protein; selenocysteine-specific translation elongation factor 597061 9141461 Bmur_0487 Brachyspira murdochii DSM 12563 selenocysteine-specific translation elongation factor YP_003632789.1 595244 R 526224 CDS YP_003632790.1 296125538 9141462 complement(597434..598789) 1 NC_014150.1 TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: bhy:BHWA1_00360 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase; L-seryl-tRNA selenium transferase 598789 9141462 Bmur_0488 Brachyspira murdochii DSM 12563 L-seryl-tRNA selenium transferase YP_003632790.1 597434 R 526224 CDS YP_003632791.1 296125539 9141463 599635..600216 1 NC_014150.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bhy:BHWA1_00605 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 600216 9141463 Bmur_0489 Brachyspira murdochii DSM 12563 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_003632791.1 599635 D 526224 CDS YP_003632792.1 296125540 9141464 600244..601143 1 NC_014150.1 KEGG: bhy:BHWA1_00604 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 601143 9141464 Bmur_0490 Brachyspira murdochii DSM 12563 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_003632792.1 600244 D 526224 CDS YP_003632793.1 296125541 9141465 601181..602332 1 NC_014150.1 KEGG: bhy:BHWA1_00261 hypothetical protein; hypothetical protein 602332 9141465 Bmur_0491 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632793.1 601181 D 526224 CDS YP_003632794.1 296125542 9141466 602379..603083 1 NC_014150.1 KEGG: bhy:BHWA1_00262 hypothetical protein; hypothetical protein 603083 9141466 Bmur_0492 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632794.1 602379 D 526224 CDS YP_003632795.1 296125543 9141467 603094..603780 1 NC_014150.1 KEGG: bhy:BHWA1_00263 hypothetical protein; hypothetical protein 603780 9141467 Bmur_0493 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632795.1 603094 D 526224 CDS YP_003632796.1 296125544 9141468 complement(603996..604349) 1 NC_014150.1 TIGRFAM: preprotein translocase, SecG subunit; KEGG: bhy:BHWA1_02635 preprotein translocase subunit SecG; preprotein translocase subunit SecG 604349 9141468 Bmur_0494 Brachyspira murdochii DSM 12563 preprotein translocase subunit SecG YP_003632796.1 603996 R 526224 CDS YP_003632797.1 296125545 9141469 604551..606149 1 NC_014150.1 KEGG: bhy:BHWA1_02634 hypothetical protein; hypothetical protein 606149 9141469 Bmur_0495 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632797.1 604551 D 526224 CDS YP_003632798.1 296125546 9141470 606183..608936 1 NC_014150.1 KEGG: bhy:BHWA1_02633 hypothetical protein; hypothetical protein 608936 9141470 Bmur_0496 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632798.1 606183 D 526224 CDS YP_003632799.1 296125547 9141471 608951..609724 1 NC_014150.1 PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: bhy:BHWA1_02632 glucosamine-6- phosphate isomerase; glucosamine/galactosamine-6-phosphate isomerase 609724 9141471 Bmur_0497 Brachyspira murdochii DSM 12563 glucosamine/galactosamine-6-phosphate isomerase YP_003632799.1 608951 D 526224 CDS YP_003632800.1 296125548 9141472 609738..611702 1 NC_014150.1 KEGG: bhy:BHWA1_02631 N-acetylglucosamine- 6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 611702 9141472 Bmur_0498 Brachyspira murdochii DSM 12563 N-acetylglucosamine-6-phosphate deacetylase YP_003632800.1 609738 D 526224 CDS YP_003632801.1 296125549 9141473 complement(611770..614913) 1 NC_014150.1 KEGG: cjr:CJE0310 D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase 614913 9141473 Bmur_0499 Brachyspira murdochii DSM 12563 D12 class N6 adenine-specific DNA methyltransferase YP_003632801.1 611770 R 526224 CDS YP_003632802.1 296125550 9141475 615174..615848 1 NC_014150.1 KEGG: bhy:BHWA1_02629 hypothetical protein; hypothetical protein 615848 9141475 Bmur_0500 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632802.1 615174 D 526224 CDS YP_003632803.1 296125551 9141476 616268..617335 1 NC_014150.1 KEGG: bhy:BHWA1_00620 FrvX, cellulase M-like protein; PFAM: peptidase M42 family protein; glutamyl aminopeptidase 617335 9141476 Bmur_0501 Brachyspira murdochii DSM 12563 glutamyl aminopeptidase YP_003632803.1 616268 D 526224 CDS YP_003632804.1 296125552 9141477 complement(617407..617835) 1 NC_014150.1 KEGG: bhy:BHWA1_00621 hypothetical protein; hypothetical protein 617835 9141477 Bmur_0502 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632804.1 617407 R 526224 CDS YP_003632805.1 296125553 9141478 complement(617901..619025) 1 NC_014150.1 KEGG: bhy:BHWA1_00622 sialidase; sialidase 619025 9141478 Bmur_0503 Brachyspira murdochii DSM 12563 sialidase YP_003632805.1 617901 R 526224 CDS YP_003632806.1 296125554 9141479 complement(619120..619896) 1 NC_014150.1 KEGG: bhy:BHWA1_00623 hypothetical protein; hypothetical protein 619896 9141479 Bmur_0504 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632806.1 619120 R 526224 CDS YP_003632807.1 296125555 9141480 620089..620190 1 NC_014150.1 hypothetical protein 620190 9141480 Bmur_0505 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632807.1 620089 D 526224 CDS YP_003632808.1 296125556 9141481 620733..621359 1 NC_014150.1 KEGG: bhy:BHWA1_00624 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 621359 9141481 Bmur_0506 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632808.1 620733 D 526224 CDS YP_003632809.1 296125557 9141482 complement(621520..622197) 1 NC_014150.1 KEGG: bhy:BHWA1_00625 N-glycosylase/DNA lyase; DNA-(apurinic or apyrimidinic site) lyase 622197 9141482 Bmur_0507 Brachyspira murdochii DSM 12563 DNA-(apurinic or apyrimidinic site) lyase YP_003632809.1 621520 R 526224 CDS YP_003632810.1 296125558 9141483 complement(622277..624001) 1 NC_014150.1 KEGG: apob; apolipoprotein B; hypothetical protein 624001 9141483 Bmur_0508 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632810.1 622277 R 526224 CDS YP_003632811.1 296125559 9141484 624530..625597 1 NC_014150.1 PFAM: metallophosphoesterase; KEGG: bhy:BHWA1_00716 exonuclease; metallophosphoesterase 625597 9141484 Bmur_0509 Brachyspira murdochii DSM 12563 metallophosphoesterase YP_003632811.1 624530 D 526224 CDS YP_003632812.1 296125560 9141485 complement(625606..626643) 1 NC_014150.1 PFAM: glycosyl transferase 9; KEGG: bhy:BHWA1_00299 lipopolysaccharide heptosyltransferase II; glycosyl transferase 626643 9141485 Bmur_0510 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632812.1 625606 R 526224 CDS YP_003632813.1 296125561 9141486 626824..627813 1 NC_014150.1 PFAM: protein of unknown function DUF534; KEGG: bhy:BHWA1_00396 ABC transporter, periplasmic component; hypothetical protein 627813 9141486 Bmur_0511 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632813.1 626824 D 526224 CDS YP_003632814.1 296125562 9141487 complement(627897..629357) 1 NC_014150.1 KEGG: bhy:BHWA1_00782 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 629357 9141487 Bmur_0512 Brachyspira murdochii DSM 12563 radical SAM protein YP_003632814.1 627897 R 526224 CDS YP_003632815.1 296125563 9141488 complement(629452..630255) 1 NC_014150.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bhy:BHWA1_00910 DP-dependent 7-alpha- hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase SDR 630255 9141488 Bmur_0513 Brachyspira murdochii DSM 12563 short-chain dehydrogenase/reductase SDR YP_003632815.1 629452 R 526224 CDS YP_003632816.1 296125564 9141489 complement(630334..631647) 1 NC_014150.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: bhy:BHWA1_00911 NorM, Na+-driven multidrug efflux pump; multi antimicrobial extrusion protein MatE 631647 9141489 Bmur_0514 Brachyspira murdochii DSM 12563 multi antimicrobial extrusion protein MatE YP_003632816.1 630334 R 526224 CDS YP_003632817.1 296125565 9141490 631947..632663 1 NC_014150.1 KEGG: bhy:BHWA1_00913 hypothetical protein; hypothetical protein 632663 9141490 Bmur_0515 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632817.1 631947 D 526224 CDS YP_003632818.1 296125566 9141491 632729..633238 1 NC_014150.1 KEGG: bhy:BHWA1_00914 hypothetical protein; hypothetical protein 633238 9141491 Bmur_0516 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632818.1 632729 D 526224 CDS YP_003632819.1 296125567 9141492 633248..634237 1 NC_014150.1 KEGG: bhy:BHWA1_00915 MoxR-like ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; ATPase AAA 634237 9141492 Bmur_0517 Brachyspira murdochii DSM 12563 ATPase AAA YP_003632819.1 633248 D 526224 CDS YP_003632820.1 296125568 9141493 634863..636314 1 NC_014150.1 KEGG: bhy:BHWA1_00919 catalase; PFAM: catalase related subgroup; catalase domain protein; catalase 636314 9141493 Bmur_0518 Brachyspira murdochii DSM 12563 catalase YP_003632820.1 634863 D 526224 CDS YP_003632821.1 296125569 9141494 complement(636500..637696) 1 NC_014150.1 PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00947 aspartate aminotransferase; class I and II aminotransferase 637696 9141494 Bmur_0519 Brachyspira murdochii DSM 12563 class I and II aminotransferase YP_003632821.1 636500 R 526224 CDS YP_003632822.1 296125570 9141495 638120..639763 1 NC_014150.1 KEGG: bhy:BHWA1_00948 hypothetical protein; hypothetical protein 639763 9141495 Bmur_0520 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632822.1 638120 D 526224 CDS YP_003632823.1 296125571 9141496 639867..640424 1 NC_014150.1 KEGG: bhy:BHWA1_00949 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase 640424 9141496 Bmur_0521 Brachyspira murdochii DSM 12563 adenylate kinase YP_003632823.1 639867 D 526224 CDS YP_003632824.1 296125572 9141497 640720..641184 1 NC_014150.1 KEGG: bhy:BHWA1_00950 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 641184 9141497 Bmur_0522 Brachyspira murdochii DSM 12563 NusB antitermination factor YP_003632824.1 640720 D 526224 CDS YP_003632825.1 296125573 9141498 641156..643051 1 NC_014150.1 KEGG: bhy:BHWA1_00951 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 643051 9141498 Bmur_0523 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632825.1 641156 D 526224 CDS YP_003632826.1 296125574 9141499 complement(643362..645242) 1 NC_014150.1 KEGG: dol:Dole_1466 hypothetical protein; hypothetical protein 645242 9141499 Bmur_0524 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632826.1 643362 R 526224 CDS YP_003632827.1 296125575 9141500 complement(645313..646884) 1 NC_014150.1 KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein 646884 9141500 Bmur_0525 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632827.1 645313 R 526224 CDS YP_003632828.1 296125576 9141501 complement(646902..647831) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: dae:Dtox_4133 glycosyl transferase 2; glycosyl transferase 647831 9141501 Bmur_0526 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632828.1 646902 R 526224 CDS YP_003632829.1 296125577 9141502 complement(647879..648064) 1 NC_014150.1 KEGG: Av71 muscle cell intermediate filament; Av71 muscle cell intermediate filament 648064 9141502 Bmur_0527 Brachyspira murdochii DSM 12563 Av71 muscle cell intermediate filament YP_003632829.1 647879 R 526224 CDS YP_003632830.1 296125578 9141503 648223..648780 1 NC_014150.1 KEGG: bhy:BHWA1_00783 hypothetical protein; hypothetical protein 648780 9141503 Bmur_0528 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632830.1 648223 D 526224 CDS YP_003632831.1 296125579 9141504 complement(648868..650628) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 650628 9141504 Bmur_0529 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632831.1 648868 R 526224 CDS YP_003632832.1 296125580 9141505 complement(650743..651300) 1 NC_014150.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bhy:BHWA1_00251 flavodoxin; flavodoxin/nitric oxide synthase 651300 9141505 Bmur_0530 Brachyspira murdochii DSM 12563 flavodoxin/nitric oxide synthase YP_003632832.1 650743 R 526224 CDS YP_003632833.1 296125581 9141506 complement(651600..651839) 1 NC_014150.1 KEGG: bhy:BHWA1_00073 hypothetical protein; hypothetical protein 651839 9141506 Bmur_0531 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632833.1 651600 R 526224 CDS YP_003632834.1 296125582 9141507 651967..652431 1 NC_014150.1 KEGG: bhy:BHWA1_00558 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 652431 9141507 Bmur_0532 Brachyspira murdochii DSM 12563 large conductance mechanosensitive channel protein YP_003632834.1 651967 D 526224 CDS YP_003632835.1 296125583 9141508 complement(652454..653227) 1 NC_014150.1 KEGG: bhy:BHWA1_00535 iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 653227 9141508 Bmur_0533 Brachyspira murdochii DSM 12563 ABC transporter YP_003632835.1 652454 R 526224 CDS YP_003632836.1 296125584 9141509 complement(653229..654233) 1 NC_014150.1 PFAM: transport system permease; KEGG: bhy:BHWA1_00536 ferric ion ABC transpoter; transport system permease 654233 9141509 Bmur_0534 Brachyspira murdochii DSM 12563 transport system permease YP_003632836.1 653229 R 526224 CDS YP_003632837.1 296125585 9141510 complement(654241..655185) 1 NC_014150.1 PFAM: periplasmic binding protein; KEGG: bhy:BHWA1_00537 iron compound ABC transporter, periplasmic iron compound-binding protein; periplasmic binding protein 655185 9141510 Bmur_0535 Brachyspira murdochii DSM 12563 periplasmic binding protein YP_003632837.1 654241 R 526224 CDS YP_003632838.1 296125586 9141511 complement(655326..655955) 1 NC_014150.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bhy:BHWA1_00538 biopolymer transport protein ExbB; MotA/TolQ/ExbB proton channel 655955 9141511 Bmur_0536 Brachyspira murdochii DSM 12563 MotA/TolQ/ExbB proton channel YP_003632838.1 655326 R 526224 CDS YP_003632839.1 296125587 9141512 656290..657348 1 NC_014150.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: bhy:BHWA1_00539 N-acetyl-gamma-glutamyl- phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 657348 9141512 Bmur_0537 Brachyspira murdochii DSM 12563 N-acetyl-gamma-glutamyl-phosphate reductase YP_003632839.1 656290 D 526224 CDS YP_003632840.1 296125588 9141513 657806..659038 1 NC_014150.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bhy:BHWA1_00540 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 659038 9141513 Bmur_0538 Brachyspira murdochii DSM 12563 arginine biosynthesis bifunctional protein ArgJ YP_003632840.1 657806 D 526224 CDS YP_003632841.1 296125589 9141514 659077..659943 1 NC_014150.1 TIGRFAM: acetylglutamate kinase; KEGG: bhy:BHWA1_00541 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 659943 9141514 Bmur_0539 Brachyspira murdochii DSM 12563 acetylglutamate kinase YP_003632841.1 659077 D 526224 CDS YP_003632842.1 296125590 9141515 659981..661219 1 NC_014150.1 KEGG: bhy:BHWA1_00542 ArgD, ornithine/acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 661219 9141515 Bmur_0540 Brachyspira murdochii DSM 12563 acetylornithine and succinylornithine aminotransferase YP_003632842.1 659981 D 526224 CDS YP_003632843.1 296125591 9141516 661645..662856 1 NC_014150.1 PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_00837 GltP, Na+/H+-dicarboxylate symporter; sodium:dicarboxylate symporter 662856 9141516 Bmur_0541 Brachyspira murdochii DSM 12563 sodium:dicarboxylate symporter YP_003632843.1 661645 D 526224 CDS YP_003632844.1 296125592 9141517 662838..663359 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00975 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 663359 9141517 Bmur_0542 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003632844.1 662838 D 526224 CDS YP_003632845.1 296125593 9141520 663816..664163 1 NC_014150.1 KEGG: bhy:BHWA1_00836 nitrogen regulatory protein PII; nitrogen regulatory protein PII 664163 9141520 Bmur_0545 Brachyspira murdochii DSM 12563 nitrogen regulatory protein PII YP_003632845.1 663816 D 526224 CDS YP_003632846.1 296125594 9141521 complement(664240..665079) 1 NC_014150.1 KEGG: bhy:BHWA1_00976 ferredoxin; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; RnfABCDGE type electron transport complex subunit B 665079 9141521 Bmur_0546 Brachyspira murdochii DSM 12563 RnfABCDGE type electron transport complex subunit B YP_003632846.1 664240 R 526224 CDS YP_003632847.1 296125595 9141522 complement(665121..665702) 1 NC_014150.1 KEGG: bhy:BHWA1_00977 RnfA, predicted DH:ubiquinone oxidoreductase, subunit RnfA; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit A 665702 9141522 Bmur_0547 Brachyspira murdochii DSM 12563 RnfABCDGE type electron transport complex subunit A YP_003632847.1 665121 R 526224 CDS YP_003632848.1 296125596 9141523 complement(665695..666354) 1 NC_014150.1 KEGG: bhy:BHWA1_00978 SoxR-reducing system protein RsxE; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit E 666354 9141523 Bmur_0548 Brachyspira murdochii DSM 12563 RnfABCDGE type electron transport complex subunit E YP_003632848.1 665695 R 526224 CDS YP_003632849.1 296125597 9141524 complement(666475..668388) 1 NC_014150.1 KEGG: bhy:BHWA1_00979 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 668388 9141524 Bmur_0549 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003632849.1 666475 R 526224 CDS YP_003632850.1 296125598 9141525 complement(668942..669646) 1 NC_014150.1 KEGG: bhy:BHWA1_00922 hypothetical protein; hypothetical protein 669646 9141525 Bmur_0550 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632850.1 668942 R 526224 CDS YP_003632851.1 296125599 9141526 complement(669922..671013) 1 NC_014150.1 KEGG: bhy:BHWA1_01064 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 671013 9141526 Bmur_0551 Brachyspira murdochii DSM 12563 ribosome small subunit-dependent GTPase A YP_003632851.1 669922 R 526224 CDS YP_003632852.1 296125600 9141527 complement(671164..673101) 1 NC_014150.1 KEGG: bhy:BHWA1_01068 cadmium-translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; cadmium-translocating P-type ATPase 673101 9141527 Bmur_0552 Brachyspira murdochii DSM 12563 cadmium-translocating P-type ATPase YP_003632852.1 671164 R 526224 CDS YP_003632853.1 296125601 9141528 complement(673088..673456) 1 NC_014150.1 KEGG: bhy:BHWA1_01069 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator 673456 9141528 Bmur_0553 Brachyspira murdochii DSM 12563 ArsR family transcriptional regulator YP_003632853.1 673088 R 526224 CDS YP_003632854.1 296125602 9141529 674081..674686 1 NC_014150.1 KEGG: bhy:BHWA1_01070 SmpB outer membrane protein; SmpB outer membrane protein 674686 9141529 Bmur_0554 Brachyspira murdochii DSM 12563 SmpB outer membrane protein YP_003632854.1 674081 D 526224 CDS YP_003632855.1 296125603 9141530 675148..677130 1 NC_014150.1 KEGG: bhy:BHWA1_01071 hypothetical protein; hypothetical protein 677130 9141530 Bmur_0555 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632855.1 675148 D 526224 CDS YP_003632856.1 296125604 9141531 677156..678025 1 NC_014150.1 PFAM: ribosomal L11 methyltransferase; KEGG: bhy:BHWA1_01072 ribosomal protein L11 methyltransferase; ribosomal L11 methyltransferase 678025 9141531 Bmur_0556 Brachyspira murdochii DSM 12563 ribosomal L11 methyltransferase YP_003632856.1 677156 D 526224 CDS YP_003632857.1 296125605 9141532 678067..679365 1 NC_014150.1 KEGG: bhy:BHWA1_01073 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 679365 9141532 Bmur_0557 Brachyspira murdochii DSM 12563 gamma-glutamyl phosphate reductase YP_003632857.1 678067 D 526224 CDS YP_003632858.1 296125606 9141533 complement(679437..679838) 1 NC_014150.1 KEGG: bhy:BHWA1_01077 hypothetical protein; hypothetical protein 679838 9141533 Bmur_0558 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632858.1 679437 R 526224 CDS YP_003632859.1 296125607 9141534 680039..680236 1 NC_014150.1 KEGG: bhy:BHWA1_00853 hypothetical protein; hypothetical protein 680236 9141534 Bmur_0559 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632859.1 680039 D 526224 CDS YP_003632860.1 296125608 9141535 complement(680406..680741) 1 NC_014150.1 KEGG: bhy:BHWA1_00216 hypothetical protein; hypothetical protein 680741 9141535 Bmur_0560 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632860.1 680406 R 526224 CDS YP_003632861.1 296125609 9141536 680965..681729 1 NC_014150.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bhy:BHWA1_01078 sporulation initiation inhibitor protein Soj; cobyrinic acid ac-diamide synthase 681729 9141536 Bmur_0561 Brachyspira murdochii DSM 12563 cobyrinic acid ac-diamide synthase YP_003632861.1 680965 D 526224 CDS YP_003632862.1 296125610 9141537 681832..682770 1 NC_014150.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bhy:BHWA1_01079 stage 0 sporulation protein J; SMART: ParB domain protein nuclease; parB-like partition protein 682770 9141537 Bmur_0562 Brachyspira murdochii DSM 12563 parB-like partition protein YP_003632862.1 681832 D 526224 CDS YP_003632863.1 296125611 9141538 682780..684000 1 NC_014150.1 KEGG: bhy:BHWA1_01080 hypothetical protein; hypothetical protein 684000 9141538 Bmur_0563 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632863.1 682780 D 526224 CDS YP_003632864.1 296125612 9141539 complement(684249..684938) 1 NC_014150.1 KEGG: bhy:BHWA1_01081 hypothetical protein; hypothetical protein 684938 9141539 Bmur_0564 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632864.1 684249 R 526224 CDS YP_003632865.1 296125613 9141540 complement(685164..686204) 1 NC_014150.1 KEGG: bhy:BHWA1_01082 hypothetical protein; hypothetical protein 686204 9141540 Bmur_0565 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632865.1 685164 R 526224 CDS YP_003632866.1 296125614 9141541 complement(686232..687047) 1 NC_014150.1 KEGG: bhy:BHWA1_01083 metallo-dependent phosphatase; metallo-dependent phosphatase 687047 9141541 Bmur_0566 Brachyspira murdochii DSM 12563 metallo-dependent phosphatase YP_003632866.1 686232 R 526224 CDS YP_003632867.1 296125615 9141542 complement(687073..688602) 1 NC_014150.1 SMART: metal-dependent phosphohydrolase HD region; KH domain protein; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; KEGG: bhy:BHWA1_01084 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; metal dependent phosphohydrolase 688602 9141542 Bmur_0567 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003632867.1 687073 R 526224 CDS YP_003632868.1 296125616 9141543 complement(688724..689263) 1 NC_014150.1 PFAM: Rubrerythrin; KEGG: bhy:BHWA1_01085 rubrerythrin fusion protein; rubrerythrin 689263 9141543 Bmur_0568 Brachyspira murdochii DSM 12563 rubrerythrin YP_003632868.1 688724 R 526224 CDS YP_003632869.1 296125617 9141544 689483..690097 1 NC_014150.1 KEGG: bhy:BHWA1_01086 cytidylate kinase; cytidylate kinase 690097 9141544 Bmur_0569 Brachyspira murdochii DSM 12563 cytidylate kinase YP_003632869.1 689483 D 526224 CDS YP_003632870.1 296125618 9141545 690174..690674 1 NC_014150.1 KEGG: bhy:BHWA1_01087 hypothetical protein; hypothetical protein 690674 9141545 Bmur_0570 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632870.1 690174 D 526224 CDS YP_003632871.1 296125619 9141546 690761..691381 1 NC_014150.1 KEGG: smu:SMU.31 hypothetical protein; hypothetical protein 691381 9141546 Bmur_0571 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632871.1 690761 D 526224 CDS YP_003632872.1 296125620 9141547 691916..692686 1 NC_014150.1 KEGG: cvi:CV_3244 N-acetylglucosamine metabolism protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 692686 9141547 Bmur_0572 Brachyspira murdochii DSM 12563 HAD-superfamily hydrolase YP_003632872.1 691916 D 526224 CDS YP_003632873.1 296125621 9141548 692807..693934 1 NC_014150.1 PFAM: major facilitator superfamily MFS_1; KEGG: bhy:BHWA1_00257 major facilitator superfamily MFS 1; major facilitator superfamily protein 693934 9141548 Bmur_0573 Brachyspira murdochii DSM 12563 major facilitator superfamily protein YP_003632873.1 692807 D 526224 CDS YP_003632874.1 296125622 9141549 694039..694962 1 NC_014150.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_00256 hypothetical protein; hypothetical protein 694962 9141549 Bmur_0574 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632874.1 694039 D 526224 CDS YP_003632875.1 296125623 9141550 complement(695052..695558) 1 NC_014150.1 PFAM: Protein of unknown function DUF2147; KEGG: bhy:BHWA1_00255 signal peptide protein; hypothetical protein 695558 9141550 Bmur_0575 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632875.1 695052 R 526224 CDS YP_003632876.1 296125624 9141551 complement(695824..696324) 1 NC_014150.1 PFAM: Protein of unknown function DUF2147; KEGG: bhy:BHWA1_00253 hypothetical protein; hypothetical protein 696324 9141551 Bmur_0576 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632876.1 695824 R 526224 CDS YP_003632877.1 296125625 9141552 complement(696405..698033) 1 NC_014150.1 KEGG: bhy:BHWA1_00252 phytoene dehydrogenase-like protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; all-trans-retinol 13,14-reductase 698033 9141552 Bmur_0577 Brachyspira murdochii DSM 12563 all-trans-retinol 13,14-reductase YP_003632877.1 696405 R 526224 CDS YP_003632878.1 296125626 9141553 698567..700549 1 NC_014150.1 KEGG: bhy:BHWA1_01021 hypothetical protein; hypothetical protein 700549 9141553 Bmur_0578 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632878.1 698567 D 526224 CDS YP_003632879.1 296125627 9141554 700570..700845 1 NC_014150.1 KEGG: sae:NWMN_0039 hypothetical protein; hypothetical protein 700845 9141554 Bmur_0579 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632879.1 700570 D 526224 CDS YP_003632880.1 296125628 9141555 701039..701461 1 NC_014150.1 KEGG: bhy:BHWA1_01020 rhodanese-like domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein 701461 9141555 Bmur_0580 Brachyspira murdochii DSM 12563 Rhodanese domain-containing protein YP_003632880.1 701039 D 526224 CDS YP_003632881.1 296125629 9141556 complement(701565..703079) 1 NC_014150.1 PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: bhy:BHWA1_01019 5'-nucleotidase; 5'-nucleotidase 703079 9141556 Bmur_0581 Brachyspira murdochii DSM 12563 5'-nucleotidase YP_003632881.1 701565 R 526224 CDS YP_003632882.1 296125630 9141557 703252..704652 1 NC_014150.1 KEGG: bhy:BHWA1_01018 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 704652 9141557 Bmur_0582 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003632882.1 703252 D 526224 CDS YP_003632883.1 296125631 9141558 704830..705360 1 NC_014150.1 KEGG: bhy:BHWA1_01015 methyl-accepting protein; methyl-accepting protein 705360 9141558 Bmur_0583 Brachyspira murdochii DSM 12563 methyl-accepting protein YP_003632883.1 704830 D 526224 CDS YP_003632884.1 296125632 9141559 705449..706777 1 NC_014150.1 KEGG: bhy:BHWA1_01015 methyl-accepting protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 706777 9141559 Bmur_0584 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003632884.1 705449 D 526224 CDS YP_003632885.1 296125633 9141560 707166..708560 1 NC_014150.1 KEGG: bhy:BHWA1_01013 hypothetical protein; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 708560 9141560 Bmur_0585 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003632885.1 707166 D 526224 CDS YP_003632886.1 296125634 9141561 708642..710276 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01011 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 710276 9141561 Bmur_0586 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003632886.1 708642 D 526224 CDS YP_003632887.1 296125635 9141562 710359..711963 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01010 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 711963 9141562 Bmur_0587 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003632887.1 710359 D 526224 CDS YP_003632888.1 296125636 9141563 complement(712040..713920) 1 NC_014150.1 KEGG: bhy:BHWA1_01009 fused fructose-specific PTS enzymes: IIBcomponent/IIC components; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PTS system fructose subfamily transporter subunit IIC 713920 9141563 Bmur_0588 Brachyspira murdochii DSM 12563 PTS system fructose subfamily transporter subunit IIC YP_003632888.1 712040 R 526224 CDS YP_003632889.1 296125637 9141564 complement(713945..714862) 1 NC_014150.1 KEGG: bhy:BHWA1_01008 fructose-1-phosphate kinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 714862 9141564 Bmur_0589 Brachyspira murdochii DSM 12563 1-phosphofructokinase YP_003632889.1 713945 R 526224 CDS YP_003632890.1 296125638 9141565 complement(714880..715623) 1 NC_014150.1 KEGG: bhy:BHWA1_01007 transcription-repair coupling factor; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 715623 9141565 Bmur_0590 Brachyspira murdochii DSM 12563 DeoR family transcriptional regulator YP_003632890.1 714880 R 526224 CDS YP_003632891.1 296125639 9141566 715897..717114 1 NC_014150.1 TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_02436 metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 717114 9141566 Bmur_0591 Brachyspira murdochii DSM 12563 amidohydrolase YP_003632891.1 715897 D 526224 CDS YP_003632892.1 296125640 9141567 717407..718462 1 NC_014150.1 KEGG: bhy:BHWA1_00611 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 718462 9141567 Bmur_0592 Brachyspira murdochii DSM 12563 threonine synthase YP_003632892.1 717407 D 526224 CDS YP_003632893.1 296125641 9141568 718524..719438 1 NC_014150.1 Unusual start codon; TIGRFAM: homoserine kinase; KEGG: bhy:BHWA1_00610 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; homoserine kinase 719438 9141568 Bmur_0593 Brachyspira murdochii DSM 12563 homoserine kinase YP_003632893.1 718524 D 526224 CDS YP_003632894.1 296125642 9141569 719578..720576 1 NC_014150.1 KEGG: bhy:BHWA1_00044 hypothetical protein; hypothetical protein 720576 9141569 Bmur_0594 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632894.1 719578 D 526224 CDS YP_003632895.1 296125643 9141570 complement(720949..721518) 1 NC_014150.1 KEGG: bhy:BHWA1_00043 hypothetical protein; hypothetical protein 721518 9141570 Bmur_0595 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632895.1 720949 R 526224 CDS YP_003632896.1 296125644 9141571 complement(721533..722351) 1 NC_014150.1 PFAM: ABC transporter; KEGG: bhy:BHWA1_00042 ABC-type Mn/Zn transport system; ABC transporter 722351 9141571 Bmur_0596 Brachyspira murdochii DSM 12563 ABC transporter YP_003632896.1 721533 R 526224 CDS YP_003632897.1 296125645 9141572 complement(722348..723040) 1 NC_014150.1 KEGG: bhy:BHWA1_00041 ABC-type Mn/Zn transport system; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 723040 9141572 Bmur_0597 Brachyspira murdochii DSM 12563 ABC transporter YP_003632897.1 722348 R 526224 CDS YP_003632898.1 296125646 9141573 complement(723044..724045) 1 NC_014150.1 PFAM: periplasmic solute binding protein; KEGG: bhy:BHWA1_00040 metal binding protein; periplasmic solute binding protein 724045 9141573 Bmur_0598 Brachyspira murdochii DSM 12563 periplasmic solute binding protein YP_003632898.1 723044 R 526224 CDS YP_003632899.1 296125647 9141574 complement(724122..724415) 1 NC_014150.1 KEGG: nucleoside transporter family protein; hypothetical protein 724415 9141574 Bmur_0599 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632899.1 724122 R 526224 CDS YP_003632900.1 296125648 9141575 complement(724540..725148) 1 NC_014150.1 KEGG: bhy:BHWA1_00039 hypothetical protein; hypothetical protein 725148 9141575 Bmur_0600 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632900.1 724540 R 526224 CDS YP_003632901.1 296125649 9141576 725294..726379 1 NC_014150.1 KEGG: bhy:BHWA1_01026 hypothetical protein; hypothetical protein 726379 9141576 Bmur_0601 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632901.1 725294 D 526224 CDS YP_003632902.1 296125650 9141577 726675..726908 1 NC_014150.1 KEGG: bhy:BHWA1_01028 SirA like N, SirA like N, a protein of unknown function; hypothetical protein 726908 9141577 Bmur_0602 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632902.1 726675 D 526224 CDS YP_003632903.1 296125651 9141578 727262..728866 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02537 OppA, ABC-type oligopeptide transport system, periplasmic component; ABC transporter substrate-binding protein 728866 9141578 Bmur_0603 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003632903.1 727262 D 526224 CDS YP_003632904.1 296125652 9141579 729011..729451 1 NC_014150.1 KEGG: bhy:BHWA1_02538 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 729451 9141579 Bmur_0604 Brachyspira murdochii DSM 12563 MarR family transcriptional regulator YP_003632904.1 729011 D 526224 CDS YP_003632905.1 296125653 9141580 complement(729475..730560) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00845 TPR domain-containing protein; hypothetical protein 730560 9141580 Bmur_0605 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632905.1 729475 R 526224 CDS YP_003632906.1 296125654 9141581 complement(730565..731224) 1 NC_014150.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); KEGG: bhy:BHWA1_00846 phosphoserine phosphatase SerB; HAD-superfamily hydrolase 731224 9141581 Bmur_0606 Brachyspira murdochii DSM 12563 HAD-superfamily hydrolase YP_003632906.1 730565 R 526224 CDS YP_003632907.1 296125655 9141582 731456..732025 1 NC_014150.1 TIGRFAM: peptide deformylase; KEGG: bhy:BHWA1_00847 N-formylmethionyl-tRNA deformylase; PFAM: formylmethionine deformylase; peptide deformylase 732025 9141582 Bmur_0607 Brachyspira murdochii DSM 12563 peptide deformylase YP_003632907.1 731456 D 526224 CDS YP_003632908.1 296125656 9141583 732055..732708 1 NC_014150.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bhy:BHWA1_00848 HAD-superfamily hydrolase, subfamily IA, variant 1; haloacid dehalogenase 732708 9141583 Bmur_0608 Brachyspira murdochii DSM 12563 haloacid dehalogenase YP_003632908.1 732055 D 526224 CDS YP_003632909.1 296125657 9141584 732820..734058 1 NC_014150.1 KEGG: bhy:BHWA1_00849 metalloendopeptidase- like membrane protein; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; peptidase M23 734058 9141584 Bmur_0609 Brachyspira murdochii DSM 12563 peptidase M23 YP_003632909.1 732820 D 526224 CDS YP_003632910.1 296125658 9141585 734183..735010 1 NC_014150.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bhy:BHWA1_00850 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 735010 9141585 Bmur_0610 Brachyspira murdochii DSM 12563 diguanylate cyclase YP_003632910.1 734183 D 526224 CDS YP_003632911.1 296125659 9141586 complement(735427..737022) 1 NC_014150.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: bhy:BHWA1_00851 potassium/proton antiporter; sodium/hydrogen exchanger 737022 9141586 Bmur_0611 Brachyspira murdochii DSM 12563 sodium/hydrogen exchanger YP_003632911.1 735427 R 526224 CDS YP_003632912.1 296125660 9141587 737313..738566 1 NC_014150.1 KEGG: bhy:BHWA1_00021 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 738566 9141587 Bmur_0612 Brachyspira murdochii DSM 12563 flagellar hook-associated protein 3 YP_003632912.1 737313 D 526224 CDS YP_003632913.1 296125661 9141588 738643..739101 1 NC_014150.1 PFAM: protein of unknown function DUF180; KEGG: bhy:BHWA1_00020 flagellar assembly protein; hypothetical protein 739101 9141588 Bmur_0613 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632913.1 738643 D 526224 CDS YP_003632914.1 296125662 9141589 739103..739354 1 NC_014150.1 KEGG: bhy:BHWA1_00019 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; carbon storage regulator CsrA 739354 9141589 Bmur_0614 Brachyspira murdochii DSM 12563 carbon storage regulator CsrA YP_003632914.1 739103 D 526224 CDS YP_003632915.1 296125663 9141590 complement(739670..740572) 1 NC_014150.1 KEGG: bhy:BHWA1_00018 hypothetical protein; hypothetical protein 740572 9141590 Bmur_0615 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632915.1 739670 R 526224 CDS YP_003632916.1 296125664 9141591 740782..741867 1 NC_014150.1 KEGG: bhy:BHWA1_00017 hypothetical protein; hypothetical protein 741867 9141591 Bmur_0616 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632916.1 740782 D 526224 CDS YP_003632917.1 296125665 9141592 742034..743188 1 NC_014150.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D- component; KEGG: 2-hydroxyglutaryl-CoA dehydratase D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 743188 9141592 Bmur_0617 Brachyspira murdochii DSM 12563 2-hydroxyglutaryl-CoA dehydratase subunit D YP_003632917.1 742034 D 526224 CDS YP_003632918.1 296125666 9141593 743307..744452 1 NC_014150.1 KEGG: cpy:Cphy_1489 cysteine desulfurase; TIGRFAM: cysteine desulfurase; PFAM: aminotransferase class V; cysteine desulfurase 744452 9141593 Bmur_0618 Brachyspira murdochii DSM 12563 cysteine desulfurase YP_003632918.1 743307 D 526224 CDS YP_003632919.1 296125667 9141594 744506..745585 1 NC_014150.1 KEGG: CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 745585 9141594 Bmur_0619 Brachyspira murdochii DSM 12563 CoA-substrate-specific enzyme activase YP_003632919.1 744506 D 526224 CDS YP_003632920.1 296125668 9141595 complement(745783..749517) 1 NC_014150.1 TIGRFAM: transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; KEGG: bhy:BHWA1_01006 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 749517 9141595 Bmur_0620 Brachyspira murdochii DSM 12563 transcription-repair coupling factor YP_003632920.1 745783 R 526224 CDS YP_003632921.1 296125669 9141596 750817..751344 1 NC_014150.1 KEGG: bhy:BHWA1_01005 hypothetical protein; hypothetical protein 751344 9141596 Bmur_0621 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632921.1 750817 D 526224 CDS YP_003632922.1 296125670 9141597 complement(751524..753659) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00980 ankyrin repeat-containing protein; ankyrin 753659 9141597 Bmur_0622 Brachyspira murdochii DSM 12563 ankyrin YP_003632922.1 751524 R 526224 CDS YP_003632923.1 296125671 9141598 754032..754904 1 NC_014150.1 PFAM: flagellin domain protein; KEGG: bhy:BHWA1_00982 flagellar protein; flagellin domain-containing protein 754904 9141598 Bmur_0623 Brachyspira murdochii DSM 12563 flagellin domain-containing protein YP_003632923.1 754032 D 526224 CDS YP_003632924.1 296125672 9141599 complement(754997..755374) 1 NC_014150.1 PFAM: sigma-70 region 4 domain protein; KEGG: bhy:BHWA1_00983 hypothetical protein; FliA/WhiG subfamily RNA polymerase sigma-28 subunit 755374 9141599 Bmur_0624 Brachyspira murdochii DSM 12563 FliA/WhiG subfamily RNA polymerase sigma-28 subunit YP_003632924.1 754997 R 526224 CDS YP_003632925.1 296125673 9141600 complement(755380..755604) 1 NC_014150.1 KEGG: bhy:BHWA1_00984 hypothetical protein; hypothetical protein 755604 9141600 Bmur_0625 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632925.1 755380 R 526224 CDS YP_003632926.1 296125674 9141601 complement(755998..757098) 1 NC_014150.1 KEGG: met:M446_3122 capsular polysaccharide biosynthesis protein-like protein; capsular polysaccharide biosynthesis protein- like protein 757098 9141601 Bmur_0626 Brachyspira murdochii DSM 12563 capsular polysaccharide biosynthesis protein- like protein YP_003632926.1 755998 R 526224 CDS YP_003632927.1 296125675 9141602 complement(757222..761526) 1 NC_014150.1 KEGG: bhy:BHWA1_01023 CoA enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 761526 9141602 Bmur_0627 Brachyspira murdochii DSM 12563 CoA-substrate-specific enzyme activase YP_003632927.1 757222 R 526224 CDS YP_003632928.1 296125676 9141603 complement(761555..761905) 1 NC_014150.1 KEGG: bhy:BHWA1_01024 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 761905 9141603 Bmur_0628 Brachyspira murdochii DSM 12563 aspartate 1-decarboxylase YP_003632928.1 761555 R 526224 CDS YP_003632929.1 296125677 9141604 complement(762084..762908) 1 NC_014150.1 PFAM: Protein of unknown function DUF2262; KEGG: bhy:BHWA1_01025 hypothetical protein; hypothetical protein 762908 9141604 Bmur_0629 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632929.1 762084 R 526224 CDS YP_003632930.1 296125678 9141605 763493..764485 1 NC_014150.1 PFAM: Rieske [2Fe-2S] iron-sulfur domain; KEGG: bhy:BHWA1_01090 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) iron-sulfur domain-containing protein 764485 9141605 Bmur_0630 Brachyspira murdochii DSM 12563 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_003632930.1 763493 D 526224 CDS YP_003632931.1 296125679 9141606 764559..764936 1 NC_014150.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bhy:BHWA1_01091 hypothetical protein; anti-sigma-factor antagonist 764936 9141606 Bmur_0631 Brachyspira murdochii DSM 12563 anti-sigma-factor antagonist YP_003632931.1 764559 D 526224 CDS YP_003632932.1 296125680 9141607 764986..765990 1 NC_014150.1 KEGG: bhy:BHWA1_01092 hypothetical protein; hypothetical protein 765990 9141607 Bmur_0632 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632932.1 764986 D 526224 CDS YP_003632933.1 296125681 9141608 766012..766947 1 NC_014150.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: riboflavin kinase; FAD synthetase; KEGG: bhy:BHWA1_01093 riboflavin biosynthesis protein RibF; SMART: riboflavin kinase; riboflavin biosynthesis protein RibF 766947 9141608 Bmur_0633 Brachyspira murdochii DSM 12563 riboflavin biosynthesis protein RibF YP_003632933.1 766012 D 526224 CDS YP_003632934.1 296125682 9141609 766914..767183 1 NC_014150.1 KEGG: dba:Dbac_2419 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 767183 9141609 Bmur_0634 Brachyspira murdochii DSM 12563 30S ribosomal protein S15 YP_003632934.1 766914 D 526224 CDS YP_003632935.1 296125683 9141610 767244..769394 1 NC_014150.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: bhy:BHWA1_01095 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; polyribonucleotide nucleotidyltransferase 769394 9141610 Bmur_0635 Brachyspira murdochii DSM 12563 polyribonucleotide nucleotidyltransferase YP_003632935.1 767244 D 526224 CDS YP_003632936.1 296125684 9141612 complement(770149..770763) 1 NC_014150.1 KEGG: bhy:BHWA1_00939 hypothetical protein; hypothetical protein 770763 9141612 Bmur_0637 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632936.1 770149 R 526224 CDS YP_003632937.1 296125685 9141613 complement(770783..774043) 1 NC_014150.1 KEGG: bhy:BHWA1_00940 hypothetical protein; hypothetical protein 774043 9141613 Bmur_0638 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632937.1 770783 R 526224 CDS YP_003632938.1 296125686 9141614 complement(774143..775726) 1 NC_014150.1 KEGG: bhy:BHWA1_00941 hypothetical protein; hypothetical protein 775726 9141614 Bmur_0639 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632938.1 774143 R 526224 CDS YP_003632939.1 296125687 9141616 776015..776338 1 NC_014150.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cpr:CPR_2022 anti-sigma F factor antagonist; anti-sigma-factor antagonist 776338 9141616 Bmur_0640 Brachyspira murdochii DSM 12563 anti-sigma-factor antagonist YP_003632939.1 776015 D 526224 CDS YP_003632940.1 296125688 9141617 complement(776675..777667) 1 NC_014150.1 KEGG: fma:FMG_0304 iron-sulfur binding reductase; iron-sulfur binding reductase 777667 9141617 Bmur_0641 Brachyspira murdochii DSM 12563 iron-sulfur binding reductase YP_003632940.1 776675 R 526224 CDS YP_003632941.1 296125689 9141618 complement(777678..778358) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: dhd:Dhaf_3860 glycosyl transferase 2; glycosyl transferase 778358 9141618 Bmur_0642 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632941.1 777678 R 526224 CDS YP_003632942.1 296125690 9141619 complement(778359..779018) 1 NC_014150.1 PFAM: Protein of unknown function DUF2064; KEGG: cbl:CLK_1999 hypothetical protein; hypothetical protein 779018 9141619 Bmur_0643 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632942.1 778359 R 526224 CDS YP_003632943.1 296125691 9141620 complement(779019..779423) 1 NC_014150.1 KEGG: bcc:BCc_173 YciC; hypothetical protein 779423 9141620 Bmur_0644 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632943.1 779019 R 526224 CDS YP_003632944.1 296125692 9141621 complement(779444..780139) 1 NC_014150.1 KEGG: ect:ECIAI39_1303 hypothetical protein; hypothetical protein 780139 9141621 Bmur_0645 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632944.1 779444 R 526224 CDS YP_003632945.1 296125693 9141622 complement(780266..780943) 1 NC_014150.1 PFAM: SNARE associated Golgi protein; KEGG: dhd:Dhaf_3864 SNARE associated Golgi protein; hypothetical protein 780943 9141622 Bmur_0646 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632945.1 780266 R 526224 CDS YP_003632946.1 296125694 9141623 complement(780927..781682) 1 NC_014150.1 PFAM: SNARE associated Golgi protein; KEGG: amt:Amet_3297 SNARE associated Golgi protein; hypothetical protein 781682 9141623 Bmur_0647 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632946.1 780927 R 526224 CDS YP_003632947.1 296125695 9141624 782190..782807 1 NC_014150.1 PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: cdl:CDR20291_2907 hypothetical protein; 5TM Receptors of the LytS-YhcK type transmembrane region 782807 9141624 Bmur_0648 Brachyspira murdochii DSM 12563 5TM Receptors of the LytS-YhcK type transmembrane region YP_003632947.1 782190 D 526224 CDS YP_003632948.1 296125696 9141625 782800..783318 1 NC_014150.1 PFAM: Protein of unknown function DUF2297; KEGG: cbi:CLJ_B1612 hypothetical protein; hypothetical protein 783318 9141625 Bmur_0649 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632948.1 782800 D 526224 CDS YP_003632949.1 296125697 9141626 783398..784231 1 NC_014150.1 KEGG: ooe:OEOE_0830 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 784231 9141626 Bmur_0650 Brachyspira murdochii DSM 12563 ABC transporter YP_003632949.1 783398 D 526224 CDS YP_003632950.1 296125698 9141627 784216..785049 1 NC_014150.1 KEGG: cbl:CLK_2892 cobalt transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 785049 9141627 Bmur_0651 Brachyspira murdochii DSM 12563 ABC transporter YP_003632950.1 784216 D 526224 CDS YP_003632951.1 296125699 9141628 785062..785802 1 NC_014150.1 PFAM: cobalt transport protein; KEGG: cdf:CD0102 ABC transporter permease; cobalt transport protein 785802 9141628 Bmur_0652 Brachyspira murdochii DSM 12563 cobalt transport protein YP_003632951.1 785062 D 526224 CDS YP_003632952.1 296125700 9141629 complement(785854..788061) 1 NC_014150.1 KEGG: bhy:BHWA1_00802 transcript cleavage factor/TPR domain containing protein; transcript cleavage factor/TPR domain containing protein 788061 9141629 Bmur_0653 Brachyspira murdochii DSM 12563 transcript cleavage factor/TPR domain containing protein YP_003632952.1 785854 R 526224 CDS YP_003632953.1 296125701 9141630 complement(788066..789046) 1 NC_014150.1 KEGG: bhy:BHWA1_00803 TPR domain-containing protein; hypothetical protein 789046 9141630 Bmur_0654 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632953.1 788066 R 526224 CDS YP_003632954.1 296125702 9141631 complement(789223..790464) 1 NC_014150.1 KEGG: bhy:BHWA1_00804 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; imidazolonepropionase 790464 9141631 Bmur_0655 Brachyspira murdochii DSM 12563 imidazolonepropionase YP_003632954.1 789223 R 526224 CDS YP_003632955.1 296125703 9141632 complement(790525..791325) 1 NC_014150.1 PFAM: protein of unknown function DUF81; KEGG: bhy:BHWA1_00805 hypothetical protein; hypothetical protein 791325 9141632 Bmur_0656 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632955.1 790525 R 526224 CDS YP_003632956.1 296125704 9141633 complement(791322..792029) 1 NC_014150.1 KEGG: bhy:BHWA1_00806 hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein 792029 9141633 Bmur_0657 Brachyspira murdochii DSM 12563 PHP domain-containing protein YP_003632956.1 791322 R 526224 CDS YP_003632957.1 296125705 9141634 complement(792040..792663) 1 NC_014150.1 KEGG: bhy:BHWA1_00807 cytidylate kinase; cytidylate kinase 792663 9141634 Bmur_0658 Brachyspira murdochii DSM 12563 cytidylate kinase YP_003632957.1 792040 R 526224 CDS YP_003632958.1 296125706 9141635 complement(792790..793590) 1 NC_014150.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bhy:BHWA1_00808 septum formation inhibitor-activating ATPase; cobyrinic acid ac-diamide synthase 793590 9141635 Bmur_0659 Brachyspira murdochii DSM 12563 cobyrinic acid ac-diamide synthase YP_003632958.1 792790 R 526224 CDS YP_003632959.1 296125707 9141636 complement(793592..793786) 1 NC_014150.1 KEGG: bhy:BHWA1_00809 hypothetical protein; hypothetical protein 793786 9141636 Bmur_0660 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632959.1 793592 R 526224 CDS YP_003632960.1 296125708 9141637 complement(793923..794885) 1 NC_014150.1 PFAM: Radical SAM domain protein; KEGG: bhy:BHWA1_00810 uncharacterized Fe-S protein PflX, of pyruvate formate lyase activating protein; radical SAM protein 794885 9141637 Bmur_0661 Brachyspira murdochii DSM 12563 radical SAM protein YP_003632960.1 793923 R 526224 CDS YP_003632961.1 296125709 9141638 complement(795069..795995) 1 NC_014150.1 PFAM: indigoidine synthase A; KEGG: bhy:BHWA1_00903 indigoidine synthase A family protein; indigoidine synthase A 795995 9141638 Bmur_0662 Brachyspira murdochii DSM 12563 indigoidine synthase A YP_003632961.1 795069 R 526224 CDS YP_003632962.1 296125710 9141639 complement(796019..796966) 1 NC_014150.1 PFAM: PfkB domain protein; KEGG: bhy:BHWA1_00904 carbohydrate kinase, PfkB family; PfkB domain-containing protein 796966 9141639 Bmur_0663 Brachyspira murdochii DSM 12563 PfkB domain-containing protein YP_003632962.1 796019 R 526224 CDS YP_003632963.1 296125711 9141640 complement(796977..797588) 1 NC_014150.1 TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain protein; KEGG: bhy:BHWA1_00905 recombination protein RecR; SMART: Toprim sub domain protein; recombination protein RecR 797588 9141640 Bmur_0664 Brachyspira murdochii DSM 12563 recombination protein RecR YP_003632963.1 796977 R 526224 CDS YP_003632964.1 296125712 9141641 complement(797588..798034) 1 NC_014150.1 KEGG: bhy:BHWA1_00906 hypothetical protein; hypothetical protein 798034 9141641 Bmur_0665 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632964.1 797588 R 526224 CDS YP_003632965.1 296125713 9141642 798287..799759 1 NC_014150.1 KEGG: bhy:BHWA1_00907 curli production assembly/transport component CsgG; curli production protein CsgG 799759 9141642 Bmur_0666 Brachyspira murdochii DSM 12563 curli production protein CsgG YP_003632965.1 798287 D 526224 CDS YP_003632966.1 296125714 9141643 799759..800355 1 NC_014150.1 KEGG: bhy:BHWA1_00908 hypothetical protein; hypothetical protein 800355 9141643 Bmur_0667 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632966.1 799759 D 526224 CDS YP_003632967.1 296125715 9141644 complement(800343..800837) 1 NC_014150.1 PFAM: Septum formation initiator; KEGG: bhy:BHWA1_00909 hypothetical protein; septum formation initiator 800837 9141644 Bmur_0668 Brachyspira murdochii DSM 12563 septum formation initiator YP_003632967.1 800343 R 526224 CDS YP_003632968.1 296125716 9141645 801104..802474 1 NC_014150.1 KEGG: bhy:BHWA1_00757 hypothetical protein; hypothetical protein 802474 9141645 Bmur_0669 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632968.1 801104 D 526224 CDS YP_003632969.1 296125717 9141646 complement(802552..803187) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 803187 9141646 Bmur_0670 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632969.1 802552 R 526224 CDS YP_003632970.1 296125718 9141647 complement(803280..804143) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 804143 9141647 Bmur_0671 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632970.1 803280 R 526224 CDS YP_003632971.1 296125719 9141648 complement(804159..804932) 1 NC_014150.1 KEGG: aap:NT05HA_2062 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; Appr-1-p processing protein 804932 9141648 Bmur_0672 Brachyspira murdochii DSM 12563 Appr-1-p processing protein YP_003632971.1 804159 R 526224 CDS YP_003632972.1 296125720 9141649 805727..807037 1 NC_014150.1 TIGRFAM: FolC bifunctional protein; KEGG: bhy:BHWA1_00154 folylpolyglutamate synthase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 807037 9141649 Bmur_0673 Brachyspira murdochii DSM 12563 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_003632972.1 805727 D 526224 CDS YP_003632973.1 296125721 9141650 complement(807128..807820) 1 NC_014150.1 KEGG: bhy:BHWA1_00155 hypothetical protein; hypothetical protein 807820 9141650 Bmur_0674 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632973.1 807128 R 526224 CDS YP_003632974.1 296125722 9141651 complement(807928..808614) 1 NC_014150.1 KEGG: bhy:BHWA1_00155 hypothetical protein; hypothetical protein 808614 9141651 Bmur_0675 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632974.1 807928 R 526224 CDS YP_003632975.1 296125723 9141652 complement(808905..809597) 1 NC_014150.1 KEGG: bhy:BHWA1_00155 hypothetical protein; hypothetical protein 809597 9141652 Bmur_0676 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632975.1 808905 R 526224 CDS YP_003632976.1 296125724 9141653 complement(809920..810423) 1 NC_014150.1 KEGG: bhy:BHWA1_00156 hypothetical protein; hypothetical protein 810423 9141653 Bmur_0677 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632976.1 809920 R 526224 CDS YP_003632977.1 296125725 9141654 complement(811007..812269) 1 NC_014150.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; glycosyl transferase group 1; KEGG: bhy:BHWA1_00157 3-deoxy-D-manno-oct-2- ulosonic acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 812269 9141654 Bmur_0678 Brachyspira murdochii DSM 12563 3-deoxy-D-manno-octulosonic-acid transferase YP_003632977.1 811007 R 526224 CDS YP_003632978.1 296125726 9141655 complement(812287..812577) 1 NC_014150.1 KEGG: bhy:BHWA1_00158 hypothetical protein; hypothetical protein 812577 9141655 Bmur_0679 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632978.1 812287 R 526224 CDS YP_003632979.1 296125727 9141656 complement(812687..813109) 1 NC_014150.1 PFAM: protein of unknown function UPF0074; KEGG: bhy:BHWA1_00148 transcriptional regulator; BadM/Rrf2 family transcriptional regulator 813109 9141656 Bmur_0680 Brachyspira murdochii DSM 12563 BadM/Rrf2 family transcriptional regulator YP_003632979.1 812687 R 526224 CDS YP_003632980.1 296125728 9141657 complement(813363..813692) 1 NC_014150.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: bhy:BHWA1_02513 phosphotransferase system cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA 813692 9141657 Bmur_0681 Brachyspira murdochii DSM 12563 PTS system lactose/cellobiose-specific transporter subunit IIA YP_003632980.1 813363 R 526224 CDS YP_003632981.1 296125729 9141658 complement(813792..815177) 1 NC_014150.1 PFAM: glycoside hydrolase 1; KEGG: cpr:CPR_2295 beta-glucosidase A; glycoside hydrolase 1 815177 9141658 Bmur_0682 Brachyspira murdochii DSM 12563 glycoside hydrolase 1 YP_003632981.1 813792 R 526224 CDS YP_003632982.1 296125730 9141659 complement(815200..816537) 1 NC_014150.1 TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: bhy:BHWA1_02515 phosphotransferase system cellobiose-specific component IIC; PFAM: phosphotransferase system EIIC; PTS system cellobiose-specific transporter subunit IIC 816537 9141659 Bmur_0683 Brachyspira murdochii DSM 12563 PTS system cellobiose-specific transporter subunit IIC YP_003632982.1 815200 R 526224 CDS YP_003632983.1 296125731 9141660 complement(816679..817761) 1 NC_014150.1 PFAM: protein of unknown function DUF871; KEGG: bhy:BHWA1_02514 hypothetical protein; hypothetical protein 817761 9141660 Bmur_0684 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632983.1 816679 R 526224 CDS YP_003632984.1 296125732 9141661 complement(817820..818128) 1 NC_014150.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; KEGG: bhy:BHWA1_02516 phosphotransferase system cellobiose-specific component IIB; PTS system lactose/cellobiose-specific transporter subunit IIB 818128 9141661 Bmur_0685 Brachyspira murdochii DSM 12563 PTS system lactose/cellobiose-specific transporter subunit IIB YP_003632984.1 817820 R 526224 CDS YP_003632985.1 296125733 9141662 818238..820121 1 NC_014150.1 PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_02517 transcriptional antiterminator , BglB; PTS modulated transcriptional regulator MtlR family 820121 9141662 Bmur_0686 Brachyspira murdochii DSM 12563 PTS modulated transcriptional regulator MtlR family YP_003632985.1 818238 D 526224 CDS YP_003632986.1 296125734 9141663 820135..820404 1 NC_014150.1 PFAM: phosphoryl transfer system HPr; KEGG: bhy:BHWA1_02518 phosphotransferase system, phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr 820404 9141663 Bmur_0687 Brachyspira murdochii DSM 12563 phosphotransferase system, phosphocarrier protein HPr YP_003632986.1 820135 D 526224 CDS YP_003632987.1 296125735 9141664 complement(820863..822029) 1 NC_014150.1 TIGRFAM: cysteine desulfurase NifS; KEGG: bhy:BHWA1_00812 NifS, cysteine sulfinate desulfinase/cysteine desulfurase-like enzyme; PFAM: aminotransferase class V; cysteine desulfurase 822029 9141664 Bmur_0688 Brachyspira murdochii DSM 12563 cysteine desulfurase YP_003632987.1 820863 R 526224 CDS YP_003632988.1 296125736 9141665 complement(822043..822876) 1 NC_014150.1 KEGG: bhy:BHWA1_00813 NifU N, NifU-like N terminal domain protein; TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; Fe-S cluster assembly protein NifU 822876 9141665 Bmur_0689 Brachyspira murdochii DSM 12563 Fe-S cluster assembly protein NifU YP_003632988.1 822043 R 526224 CDS YP_003632989.1 296125737 9141667 complement(823331..823786) 1 NC_014150.1 KEGG: bhy:BHWA1_00815 hypothetical protein; hypothetical protein 823786 9141667 Bmur_0691 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632989.1 823331 R 526224 CDS YP_003632990.1 296125738 9141668 complement(823836..824957) 1 NC_014150.1 PFAM: monogalactosyldiacylglycerol synthase; KEGG: bhy:BHWA1_00816 monogalactosyldiacylglycerol (MGDG) synthase; monogalactosyldiacylglycerol synthase 824957 9141668 Bmur_0692 Brachyspira murdochii DSM 12563 monogalactosyldiacylglycerol synthase YP_003632990.1 823836 R 526224 CDS YP_003632991.1 296125739 9141669 complement(825220..826335) 1 NC_014150.1 KEGG: bhy:BHWA1_00816 monogalactosyldiacylglycerol (MGDG) synthase; PFAM: monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 826335 9141669 Bmur_0693 Brachyspira murdochii DSM 12563 monogalactosyldiacylglycerol synthase YP_003632991.1 825220 R 526224 CDS YP_003632992.1 296125740 9141670 complement(826481..828145) 1 NC_014150.1 PFAM: RNA binding S1 domain protein; KEGG: bhy:BHWA1_00817 30S ribosomal protein S1; RNA binding S1 domain-containing protein 828145 9141670 Bmur_0694 Brachyspira murdochii DSM 12563 RNA binding S1 domain-containing protein YP_003632992.1 826481 R 526224 CDS YP_003632993.1 296125741 9141671 complement(828195..828866) 1 NC_014150.1 KEGG: bhy:BHWA1_00818 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase; cytidylate kinase 828866 9141671 Bmur_0695 Brachyspira murdochii DSM 12563 cytidylate kinase YP_003632993.1 828195 R 526224 CDS YP_003632994.1 296125742 9141672 complement(829006..829494) 1 NC_014150.1 KEGG: bhy:BHWA1_00819 hypothetical protein; hypothetical protein 829494 9141672 Bmur_0696 Brachyspira murdochii DSM 12563 hypothetical protein YP_003632994.1 829006 R 526224 CDS YP_003632995.1 296125743 9141673 complement(829590..830585) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00820 hypothetical protein; glycosyl transferase 830585 9141673 Bmur_0697 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632995.1 829590 R 526224 CDS YP_003632996.1 296125744 9141674 complement(830586..831560) 1 NC_014150.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: bhy:BHWA1_00821 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase 831560 9141674 Bmur_0698 Brachyspira murdochii DSM 12563 galactose-1-phosphate uridylyltransferase YP_003632996.1 830586 R 526224 CDS YP_003632997.1 296125745 9141675 831957..832877 1 NC_014150.1 PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00822 glycosyl transferase 8; glycosyl transferase 832877 9141675 Bmur_0699 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632997.1 831957 D 526224 CDS YP_003632998.1 296125746 9141676 832906..833916 1 NC_014150.1 PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase 833916 9141676 Bmur_0700 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632998.1 832906 D 526224 CDS YP_003632999.1 296125747 9141677 833986..835053 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00829 glycosyl transferase 2 protein; glycosyl transferase 835053 9141677 Bmur_0701 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003632999.1 833986 D 526224 CDS YP_003633000.1 296125748 9141678 complement(835059..836063) 1 NC_014150.1 PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase 836063 9141678 Bmur_0702 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633000.1 835059 R 526224 CDS YP_003633001.1 296125749 9141679 complement(836077..837123) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00829 glycosyl transferase 2 protein; glycosyl transferase 837123 9141679 Bmur_0703 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633001.1 836077 R 526224 CDS YP_003633002.1 296125750 9141680 complement(837139..838134) 1 NC_014150.1 PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase 838134 9141680 Bmur_0704 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633002.1 837139 R 526224 CDS YP_003633003.1 296125751 9141681 complement(838150..839193) 1 NC_014150.1 PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase 839193 9141681 Bmur_0705 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633003.1 838150 R 526224 CDS YP_003633004.1 296125752 9141682 complement(839402..840256) 1 NC_014150.1 PFAM: aldo/keto reductase; KEGG: bhy:BHWA1_00833 aldo/keto reductase; aldo/keto reductase 840256 9141682 Bmur_0706 Brachyspira murdochii DSM 12563 aldo/keto reductase YP_003633004.1 839402 R 526224 CDS YP_003633005.1 296125753 9141683 complement(840284..841318) 1 NC_014150.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bhy:BHWA1_00834 mechanosensitive ion channel; mechanosensitive ion channel MscS 841318 9141683 Bmur_0707 Brachyspira murdochii DSM 12563 mechanosensitive ion channel MscS YP_003633005.1 840284 R 526224 CDS YP_003633006.1 296125754 9141684 841484..842242 1 NC_014150.1 KEGG: bhy:BHWA1_00835 hypothetical protein; hypothetical protein 842242 9141684 Bmur_0708 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633006.1 841484 D 526224 CDS YP_003633007.1 296125755 9141685 complement(842334..843170) 1 NC_014150.1 KEGG: bhy:BHWA1_00960 histidinol- phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; HisJ family histidinol phosphate phosphatase 843170 9141685 Bmur_0709 Brachyspira murdochii DSM 12563 HisJ family histidinol phosphate phosphatase YP_003633007.1 842334 R 526224 CDS YP_003633008.1 296125756 9141687 complement(843415..844713) 1 NC_014150.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bhy:BHWA1_00962 hemolysin; hypothetical protein 844713 9141687 Bmur_0710 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633008.1 843415 R 526224 CDS YP_003633009.1 296125757 9141688 845486..847069 1 NC_014150.1 KEGG: bhy:BHWA1_00938 HTH XRE, helix-turn-helix XRE- family like containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 847069 9141688 Bmur_0711 Brachyspira murdochii DSM 12563 XRE family transcriptional regulator YP_003633009.1 845486 D 526224 CDS YP_003633010.1 296125758 9141689 complement(847205..847921) 1 NC_014150.1 TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; KEGG: bhy:BHWA1_01150 phosphoribosylamidoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase 847921 9141689 Bmur_0712 Brachyspira murdochii DSM 12563 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_003633010.1 847205 R 526224 CDS YP_003633011.1 296125759 9141690 complement(848014..848502) 1 NC_014150.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: bhy:BHWA1_01151 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 848502 9141690 Bmur_0713 Brachyspira murdochii DSM 12563 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_003633011.1 848014 R 526224 CDS YP_003633012.1 296125760 9141691 complement(848575..848748) 1 NC_014150.1 KEGG: bhy:BHWA1_01274 hypothetical protein; hypothetical protein 848748 9141691 Bmur_0714 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633012.1 848575 R 526224 CDS YP_003633013.1 296125761 9141692 complement(848848..849255) 1 NC_014150.1 KEGG: bhy:BHWA1_02427 hypothetical protein; hypothetical protein 849255 9141692 Bmur_0715 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633013.1 848848 R 526224 CDS YP_003633014.1 296125762 9141693 complement(849270..850088) 1 NC_014150.1 PFAM: protein of unknown function DUF164; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_02428 phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 850088 9141693 Bmur_0716 Brachyspira murdochii DSM 12563 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_003633014.1 849270 R 526224 CDS YP_003633015.1 296125763 9141694 complement(850176..852266) 1 NC_014150.1 TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: bhy:BHWA1_02429 translation elongation factor G; SMART: elongation factor G domain IV; elongation factor G domain protein; small GTP-binding protein 852266 9141694 Bmur_0717 Brachyspira murdochii DSM 12563 small GTP-binding protein YP_003633015.1 850176 R 526224 CDS YP_003633016.1 296125764 9141695 852587..854911 1 NC_014150.1 KEGG: bhy:BHWA1_00756 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 854911 9141695 Bmur_0718 Brachyspira murdochii DSM 12563 lipoprotein YP_003633016.1 852587 D 526224 CDS YP_003633017.1 296125765 9141696 855319..857808 1 NC_014150.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; FeoA family protein; Ferrous iron transport B domain protein; KEGG: bhy:BHWA1_00859 ferrous iron transport protein B; SMART: FeoA family protein; ferrous iron transport protein B 857808 9141696 Bmur_0719 Brachyspira murdochii DSM 12563 ferrous iron transport protein B YP_003633017.1 855319 D 526224 CDS YP_003633018.1 296125766 9141697 858057..858908 1 NC_014150.1 KEGG: spq:SPAB_01004 hypothetical protein; hypothetical protein 858908 9141697 Bmur_0720 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633018.1 858057 D 526224 CDS YP_003633019.1 296125767 9141698 859182..859376 1 NC_014150.1 KEGG: ferlin; ferlin 859376 9141698 Bmur_0721 Brachyspira murdochii DSM 12563 ferlin YP_003633019.1 859182 D 526224 CDS YP_003633020.1 296125768 9141699 859589..860131 1 NC_014150.1 KEGG: tel:tll0155 transposase; hypothetical protein 860131 9141699 Bmur_0722 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633020.1 859589 D 526224 CDS YP_003633021.1 296125769 9141700 complement(860242..861135) 1 NC_014150.1 PFAM: metallophosphoesterase; KEGG: bhy:BHWA1_01119 phosphodiesterase; metallophosphoesterase 861135 9141700 Bmur_0723 Brachyspira murdochii DSM 12563 metallophosphoesterase YP_003633021.1 860242 R 526224 CDS YP_003633022.1 296125770 9141701 complement(861154..863214) 1 NC_014150.1 KEGG: bhy:BHWA1_01120 hypothetical protein; hypothetical protein 863214 9141701 Bmur_0724 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633022.1 861154 R 526224 CDS YP_003633023.1 296125771 9141702 complement(863343..863720) 1 NC_014150.1 KEGG: bhy:BHWA1_01121 lipoprotein involved with copper homeostasis and adhesion; lipoprotein involved with copper homeostasis and adhesion 863720 9141702 Bmur_0725 Brachyspira murdochii DSM 12563 lipoprotein involved with copper homeostasis and adhesion YP_003633023.1 863343 R 526224 CDS YP_003633024.1 296125772 9141703 complement(863835..865358) 1 NC_014150.1 KEGG: bhy:BHWA1_01122 lysyl-tRNA synthetase LysU (class II); TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; lysyl-tRNA synthetase 865358 9141703 Bmur_0726 Brachyspira murdochii DSM 12563 lysyl-tRNA synthetase YP_003633024.1 863835 R 526224 CDS YP_003633025.1 296125773 9141704 complement(865807..866244) 1 NC_014150.1 KEGG: cch:Cag_1242 VCBS; hypothetical protein 866244 9141704 Bmur_0727 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633025.1 865807 R 526224 CDS YP_003633026.1 296125774 9141705 complement(866595..868202) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01102 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 868202 9141705 Bmur_0728 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633026.1 866595 R 526224 CDS YP_003633027.1 296125775 9141706 complement(868594..869172) 1 NC_014150.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: bhy:BHWA1_01104 PTS 2-RNA, RNA 2'- phosphotransferase, Tpt1 / KptA family; phosphotransferase KptA/Tpt1 869172 9141706 Bmur_0729 Brachyspira murdochii DSM 12563 phosphotransferase KptA/Tpt1 YP_003633027.1 868594 R 526224 CDS YP_003633028.1 296125776 9141707 869301..870017 1 NC_014150.1 PFAM: peptidase C26; KEGG: bhy:BHWA1_01105 predicted glutamine amidotransferase; peptidase C26 870017 9141707 Bmur_0730 Brachyspira murdochii DSM 12563 peptidase C26 YP_003633028.1 869301 D 526224 CDS YP_003633029.1 296125777 9141708 complement(870327..873422) 1 NC_014150.1 KEGG: bhy:BHWA1_00700 HepA, superfamily II D/R helicase, SNF2 family; PFAM: SNF2-related protein; helicase domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicase ; helicase domain protein; SNF2-related protein 873422 9141708 Bmur_0731 Brachyspira murdochii DSM 12563 SNF2-related protein YP_003633029.1 870327 R 526224 CDS YP_003633030.1 296125778 9141709 complement(873606..874382) 1 NC_014150.1 PFAM: patatin; KEGG: bhy:BHWA1_00701 patatin-like phospholipase; patatin 874382 9141709 Bmur_0732 Brachyspira murdochii DSM 12563 patatin YP_003633030.1 873606 R 526224 CDS YP_003633031.1 296125779 9141710 complement(874400..876604) 1 NC_014150.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: bhy:BHWA1_00702 flagellar hook-associated protein FliD; flagellar hook-associated 2 domain-containing protein 876604 9141710 Bmur_0733 Brachyspira murdochii DSM 12563 flagellar hook-associated 2 domain-containing protein YP_003633031.1 874400 R 526224 CDS YP_003633032.1 296125780 9141711 complement(876919..877338) 1 NC_014150.1 KEGG: bhy:BHWA1_00857 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 877338 9141711 Bmur_0734 Brachyspira murdochii DSM 12563 XRE family transcriptional regulator YP_003633032.1 876919 R 526224 CDS YP_003633033.1 296125781 9141712 complement(877342..878025) 1 NC_014150.1 PFAM: DNA repair protein RadC; KEGG: bhy:BHWA1_00858 DNA repair protein RadC; DNA repair protein RadC 878025 9141712 Bmur_0735 Brachyspira murdochii DSM 12563 DNA repair protein RadC YP_003633033.1 877342 R 526224 CDS YP_003633034.1 296125782 9141713 complement(878177..879676) 1 NC_014150.1 KEGG: bhy:BHWA1_00873 hypothetical protein; hypothetical protein 879676 9141713 Bmur_0736 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633034.1 878177 R 526224 CDS YP_003633035.1 296125783 9141714 complement(879803..880183) 1 NC_014150.1 KEGG: bhy:BHWA1_00874 hypothetical protein; hypothetical protein 880183 9141714 Bmur_0737 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633035.1 879803 R 526224 CDS YP_003633036.1 296125784 9141715 complement(880314..882431) 1 NC_014150.1 KEGG: bhy:BHWA1_00877 hypothetical protein; hypothetical protein 882431 9141715 Bmur_0738 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633036.1 880314 R 526224 CDS YP_003633037.1 296125785 9141716 complement(882537..884117) 1 NC_014150.1 KEGG: bhy:BHWA1_00875 hypothetical protein; hypothetical protein 884117 9141716 Bmur_0739 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633037.1 882537 R 526224 CDS YP_003633038.1 296125786 9141717 complement(884403..885974) 1 NC_014150.1 KEGG: bhy:BHWA1_00876 hypothetical protein; hypothetical protein 885974 9141717 Bmur_0740 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633038.1 884403 R 526224 CDS YP_003633039.1 296125787 9141718 complement(885995..886804) 1 NC_014150.1 KEGG: bhy:BHWA1_00878 hypothetical protein; hypothetical protein 886804 9141718 Bmur_0741 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633039.1 885995 R 526224 CDS YP_003633040.1 296125788 9141719 complement(887057..888037) 1 NC_014150.1 KEGG: bhy:BHWA1_00879 hypothetical protein; hypothetical protein 888037 9141719 Bmur_0742 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633040.1 887057 R 526224 CDS YP_003633041.1 296125789 9141720 complement(888021..889328) 1 NC_014150.1 PFAM: OstA family protein; KEGG: bhy:BHWA1_00880 hypothetical protein; OstA family protein 889328 9141720 Bmur_0743 Brachyspira murdochii DSM 12563 OstA family protein YP_003633041.1 888021 R 526224 CDS YP_003633042.1 296125790 9141721 complement(889348..889914) 1 NC_014150.1 PFAM: protein of unknown function DUF1239; KEGG: bhy:BHWA1_00881 hypothetical protein; hypothetical protein 889914 9141721 Bmur_0744 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633042.1 889348 R 526224 CDS YP_003633043.1 296125791 9141722 complement(889892..890443) 1 NC_014150.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: bhy:BHWA1_00882 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 890443 9141722 Bmur_0745 Brachyspira murdochii DSM 12563 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_003633043.1 889892 R 526224 CDS YP_003633044.1 296125792 9141725 complement(890737..891480) 1 NC_014150.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: bhy:BHWA1_00885 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 891480 9141725 Bmur_0746 Brachyspira murdochii DSM 12563 tRNA pseudouridine synthase A YP_003633044.1 890737 R 526224 CDS YP_003633045.1 296125793 9141726 complement(891547..892506) 1 NC_014150.1 PFAM: protein of unknown function DUF534; KEGG: bhy:BHWA1_00886 ABC transporter substrate binding protein; hypothetical protein 892506 9141726 Bmur_0747 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633045.1 891547 R 526224 CDS YP_003633046.1 296125794 9141727 892683..893735 1 NC_014150.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bhy:BHWA1_00887 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 893735 9141727 Bmur_0748 Brachyspira murdochii DSM 12563 DegT/DnrJ/EryC1/StrS aminotransferase YP_003633046.1 892683 D 526224 CDS YP_003633047.1 296125795 9141728 complement(893738..894796) 1 NC_014150.1 KEGG: bhy:BHWA1_01192 adenine-specific methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; adenine-specific DNA-methyltransferase 894796 9141728 Bmur_0749 Brachyspira murdochii DSM 12563 adenine-specific DNA-methyltransferase YP_003633047.1 893738 R 526224 CDS YP_003633048.1 296125796 9141729 894965..896089 1 NC_014150.1 KEGG: cbk:CLL_A2088 hypothetical protein; hypothetical protein 896089 9141729 Bmur_0750 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633048.1 894965 D 526224 CDS YP_003633049.1 296125797 9141730 896474..897223 1 NC_014150.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bhy:BHWA1_01182 3-ketoacyl-(acyl-carrier- protein) reductase; short-chain dehydrogenase/reductase SDR 897223 9141730 Bmur_0751 Brachyspira murdochii DSM 12563 short-chain dehydrogenase/reductase SDR YP_003633049.1 896474 D 526224 CDS YP_003633050.1 296125798 9141731 complement(897227..898414) 1 NC_014150.1 KEGG: bhy:BHWA1_02540 hypothetical protein; hypothetical protein 898414 9141731 Bmur_0752 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633050.1 897227 R 526224 CDS YP_003633051.1 296125799 9141732 898724..899401 1 NC_014150.1 TIGRFAM: histidinol-phosphate phosphatase; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: bhy:BHWA1_02541 histidinol phosphatase-related protein:histidinol- phosphatephosphatase:HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase 899401 9141732 Bmur_0753 Brachyspira murdochii DSM 12563 histidinol-phosphate phosphatase YP_003633051.1 898724 D 526224 CDS YP_003633052.1 296125800 9141733 899630..901504 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_01195 hypothetical protein; ankyrin 901504 9141733 Bmur_0754 Brachyspira murdochii DSM 12563 ankyrin YP_003633052.1 899630 D 526224 CDS YP_003633053.1 296125801 9141734 complement(901773..903365) 1 NC_014150.1 KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein 903365 9141734 Bmur_0755 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633053.1 901773 R 526224 CDS YP_003633054.1 296125802 9141735 complement(903407..904369) 1 NC_014150.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_02534 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 904369 9141735 Bmur_0756 Brachyspira murdochii DSM 12563 oligopeptide/dipeptide ABC transporter ATPase YP_003633054.1 903407 R 526224 CDS YP_003633055.1 296125803 9141736 complement(904422..905399) 1 NC_014150.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_02533 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 905399 9141736 Bmur_0757 Brachyspira murdochii DSM 12563 oligopeptide/dipeptide ABC transporter ATPase YP_003633055.1 904422 R 526224 CDS YP_003633056.1 296125804 9141737 complement(905511..906494) 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02532 binding-protein-dependent transport system, membrane component; binding-protein-dependent transport system inner membrane protein 906494 9141737 Bmur_0758 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003633056.1 905511 R 526224 CDS YP_003633057.1 296125805 9141738 complement(906514..907434) 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02531 binding-protein-dependent transport system, membrane component; binding-protein-dependent transport system inner membrane protein 907434 9141738 Bmur_0759 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003633057.1 906514 R 526224 CDS YP_003633058.1 296125806 9141739 complement(908007..908390) 1 NC_014150.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_02548 hypothetical protein; hypothetical protein 908390 9141739 Bmur_0760 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633058.1 908007 R 526224 CDS YP_003633059.1 296125807 9141740 complement(908420..908668) 1 NC_014150.1 KEGG: bhy:BHWA1_02547 hypothetical protein; hypothetical protein 908668 9141740 Bmur_0761 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633059.1 908420 R 526224 CDS YP_003633060.1 296125808 9141741 complement(908665..908925) 1 NC_014150.1 KEGG: bhy:BHWA1_02547 hypothetical protein; hypothetical protein 908925 9141741 Bmur_0762 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633060.1 908665 R 526224 CDS YP_003633061.1 296125809 9141742 909064..911067 1 NC_014150.1 KEGG: bhy:BHWA1_02546 hypothetical protein; hypothetical protein 911067 9141742 Bmur_0763 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633061.1 909064 D 526224 CDS YP_003633062.1 296125810 9141743 complement(911071..912234) 1 NC_014150.1 KEGG: bhy:BHWA1_02545 hypothetical protein; hypothetical protein 912234 9141743 Bmur_0764 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633062.1 911071 R 526224 CDS YP_003633063.1 296125811 9141744 complement(912227..912745) 1 NC_014150.1 PFAM: metallophosphoesterase; KEGG: bhy:BHWA1_02544 phosphoesterase or phosphohydrolase; metallophosphoesterase 912745 9141744 Bmur_0765 Brachyspira murdochii DSM 12563 metallophosphoesterase YP_003633063.1 912227 R 526224 CDS YP_003633064.1 296125812 9141745 912954..915362 1 NC_014150.1 KEGG: bhy:BHWA1_02542 chemotaxis histidine kinase CheA; PFAM: ATP-binding region ATPase domain protein; P2 response regulator binding domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP- binding region ATPase domain protein; CheA signal transduction histidine kinase 915362 9141745 Bmur_0766 Brachyspira murdochii DSM 12563 CheA signal transduction histidine kinase YP_003633064.1 912954 D 526224 CDS YP_003633065.1 296125813 9141746 complement(915438..916865) 1 NC_014150.1 PFAM: glycoside hydrolase 1; KEGG: cdf:CD3124 6-phospho-beta-glucosidase; glycoside hydrolase 1 916865 9141746 Bmur_0767 Brachyspira murdochii DSM 12563 glycoside hydrolase 1 YP_003633065.1 915438 R 526224 CDS YP_003633066.1 296125814 9141747 917096..918442 1 NC_014150.1 TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: bhy:BHWA1_02515 phosphotransferase system cellobiose-specific component IIC; PFAM: phosphotransferase system EIIC; PTS system cellobiose-specific transporter subunit IIC 918442 9141747 Bmur_0768 Brachyspira murdochii DSM 12563 PTS system cellobiose-specific transporter subunit IIC YP_003633066.1 917096 D 526224 CDS YP_003633067.1 296125815 9141748 complement(918525..918815) 1 NC_014150.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bhy:BHWA1_02498 peptidyl-tRNA hydrolase; antibiotic biosynthesis monooxygenase 918815 9141748 Bmur_0769 Brachyspira murdochii DSM 12563 antibiotic biosynthesis monooxygenase YP_003633067.1 918525 R 526224 CDS YP_003633068.1 296125816 9141749 complement(918812..919429) 1 NC_014150.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: bhy:BHWA1_02498 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 919429 9141749 Bmur_0770 Brachyspira murdochii DSM 12563 peptidyl-tRNA hydrolase YP_003633068.1 918812 R 526224 CDS YP_003633069.1 296125817 9141750 complement(919426..920016) 1 NC_014150.1 KEGG: bhy:BHWA1_02497 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; aminoacyl-tRNA hydrolase 920016 9141750 Bmur_0771 Brachyspira murdochii DSM 12563 aminoacyl-tRNA hydrolase YP_003633069.1 919426 R 526224 CDS YP_003633070.1 296125818 9141751 complement(920040..920630) 1 NC_014150.1 KEGG: bhy:BHWA1_02496 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25-like; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 920630 9141751 Bmur_0772 Brachyspira murdochii DSM 12563 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 YP_003633070.1 920040 R 526224 CDS YP_003633071.1 296125819 9141752 complement(920651..921604) 1 NC_014150.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: tye:THEYE_A1455 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 921604 9141752 Bmur_0773 Brachyspira murdochii DSM 12563 ribose-phosphate pyrophosphokinase YP_003633071.1 920651 R 526224 CDS YP_003633072.1 296125820 9141754 921910..923361 1 NC_014150.1 KEGG: bhy:BHWA1_02493 hypothetical protein; metal dependent phosphohydrolase 923361 9141754 Bmur_0774 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003633072.1 921910 D 526224 CDS YP_003633073.1 296125821 9141755 complement(923596..924669) 1 NC_014150.1 TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: bhy:BHWA1_02492 translation initiation factor IF-2B subunit alpha; PFAM: initiation factor 2B related; eIF-2B alpha/beta/delta-like protein 924669 9141755 Bmur_0775 Brachyspira murdochii DSM 12563 eIF-2B alpha/beta/delta-like protein YP_003633073.1 923596 R 526224 CDS YP_003633074.1 296125822 9141756 complement(924702..925928) 1 NC_014150.1 KEGG: bhy:BHWA1_02491 methylthioribose kinase; TIGRFAM: 5-methylthioribose kinase; 5-methylthioribose kinase 925928 9141756 Bmur_0776 Brachyspira murdochii DSM 12563 5-methylthioribose kinase YP_003633074.1 924702 R 526224 CDS YP_003633075.1 296125823 9141757 926367..927725 1 NC_014150.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bhy:BHWA1_02490 DH oxidase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 927725 9141757 Bmur_0777 Brachyspira murdochii DSM 12563 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003633075.1 926367 D 526224 CDS YP_003633076.1 296125824 9141758 927944..928501 1 NC_014150.1 KEGG: bhy:BHWA1_02489 hypothetical protein; hypothetical protein 928501 9141758 Bmur_0778 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633076.1 927944 D 526224 CDS YP_003633077.1 296125825 9141759 928650..929603 1 NC_014150.1 KEGG: bhy:BHWA1_02487 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase; membrane dipeptidase 929603 9141759 Bmur_0779 Brachyspira murdochii DSM 12563 membrane dipeptidase YP_003633077.1 928650 D 526224 CDS YP_003633078.1 296125826 9141760 complement(929826..930902) 1 NC_014150.1 KEGG: bhy:BHWA1_02483 S-adenosylmethionine--tR- ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 930902 9141760 Bmur_0780 Brachyspira murdochii DSM 12563 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_003633078.1 929826 R 526224 CDS YP_003633079.1 296125827 9141761 complement(930927..932561) 1 NC_014150.1 KEGG: bhy:BHWA1_02482 hypothetical protein; hypothetical protein 932561 9141761 Bmur_0781 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633079.1 930927 R 526224 CDS YP_003633080.1 296125828 9141762 complement(932572..933621) 1 NC_014150.1 KEGG: bhy:BHWA1_02481 leader peptidase (signal peptidase I); TIGRFAM: signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; signal peptidase I 933621 9141762 Bmur_0782 Brachyspira murdochii DSM 12563 signal peptidase I YP_003633080.1 932572 R 526224 CDS YP_003633081.1 296125829 9141763 complement(933724..934953) 1 NC_014150.1 PFAM: 5-methylcytosine restriction system component- like protein; KEGG: pgi:PG0972 hypothetical protein; 5-methylcytosine restriction system component- like protein 934953 9141763 Bmur_0783 Brachyspira murdochii DSM 12563 5-methylcytosine restriction system component- like protein YP_003633081.1 933724 R 526224 CDS YP_003633082.1 296125830 9141764 complement(934959..936155) 1 NC_014150.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pgi:PG0971 McrBC restriction endonuclease system, McrB subunit; ATPase AAA 936155 9141764 Bmur_0784 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633082.1 934959 R 526224 CDS YP_003633083.1 296125831 9141765 complement(936184..936573) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 936573 9141765 Bmur_0785 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633083.1 936184 R 526224 CDS YP_003633084.1 296125832 9141766 complement(936601..937011) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 937011 9141766 Bmur_0786 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633084.1 936601 R 526224 CDS YP_003633085.1 296125833 9141767 937070..937687 1 NC_014150.1 KEGG: bhy:BHWA1_02480 hypothetical protein; hypothetical protein 937687 9141767 Bmur_0787 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633085.1 937070 D 526224 CDS YP_003633086.1 296125834 9141768 937792..938664 1 NC_014150.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: bhy:BHWA1_01154 glycyl-tRNA synthetase alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit; glycyl-tRNA synthetase subunit alpha 938664 9141768 Bmur_0788 Brachyspira murdochii DSM 12563 glycyl-tRNA synthetase subunit alpha YP_003633086.1 937792 D 526224 CDS YP_003633087.1 296125835 9141769 complement(938798..940114) 1 NC_014150.1 KEGG: fnu:FN0553 D-serine dehydratase; TIGRFAM: D-serine ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; D-serine ammonia-lyase 940114 9141769 Bmur_0789 Brachyspira murdochii DSM 12563 D-serine ammonia-lyase YP_003633087.1 938798 R 526224 CDS YP_003633088.1 296125836 9141770 complement(940129..941487) 1 NC_014150.1 PFAM: gluconate transporter; KEGG: fnu:FN0554 D-serine permease; gluconate transporter 941487 9141770 Bmur_0790 Brachyspira murdochii DSM 12563 gluconate transporter YP_003633088.1 940129 R 526224 CDS YP_003633089.1 296125837 9141771 941692..942333 1 NC_014150.1 KEGG: fnu:FN0555 MerR family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 942333 9141771 Bmur_0791 Brachyspira murdochii DSM 12563 XRE family transcriptional regulator YP_003633089.1 941692 D 526224 CDS YP_003633090.1 296125838 9141772 complement(942330..942872) 1 NC_014150.1 KEGG: bhy:BHWA1_02424 shikimate kinase; PFAM: shikimate kinase; shikimate kinase 942872 9141772 Bmur_0792 Brachyspira murdochii DSM 12563 shikimate kinase YP_003633090.1 942330 R 526224 CDS YP_003633091.1 296125839 9141773 complement(942865..943989) 1 NC_014150.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; KEGG: bhy:BHWA1_02423 prephenate dehydratase; SMART: Chorismate mutase; chorismate mutase 943989 9141773 Bmur_0793 Brachyspira murdochii DSM 12563 chorismate mutase YP_003633091.1 942865 R 526224 CDS YP_003633092.1 296125840 9141774 945133..946389 1 NC_014150.1 KEGG: eca:ECA1639 hypothetical protein; hypothetical protein 946389 9141774 Bmur_0794 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633092.1 945133 D 526224 CDS YP_003633093.1 296125841 9141775 complement(946480..947664) 1 NC_014150.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: bhy:BHWA1_02419 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 947664 9141775 Bmur_0795 Brachyspira murdochii DSM 12563 S-adenosylmethionine synthetase YP_003633093.1 946480 R 526224 CDS YP_003633094.1 296125842 9141776 complement(947828..948814) 1 NC_014150.1 KEGG: bhy:BHWA1_02420 von Willebrand factor type A (vWA) domain containing protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor A 948814 9141776 Bmur_0796 Brachyspira murdochii DSM 12563 von Willebrand factor A YP_003633094.1 947828 R 526224 CDS YP_003633095.1 296125843 9141777 949278..950234 1 NC_014150.1 KEGG: bhy:BHWA1_02396 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein; TRAP transporter solute receptor, TAXI family 950234 9141777 Bmur_0797 Brachyspira murdochii DSM 12563 TRAP transporter solute receptor, TAXI family YP_003633095.1 949278 D 526224 CDS YP_003633096.1 296125844 9141778 950315..950821 1 NC_014150.1 PFAM: Domain of unknown function DUF1850; KEGG: bhy:BHWA1_02395 hypothetical protein; hypothetical protein 950821 9141778 Bmur_0798 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633096.1 950315 D 526224 CDS YP_003633097.1 296125845 9141779 950833..952806 1 NC_014150.1 KEGG: bhy:BHWA1_02394 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter, 4TM/12TM fusion protein 952806 9141779 Bmur_0799 Brachyspira murdochii DSM 12563 TRAP transporter, 4TM/12TM fusion protein YP_003633097.1 950833 D 526224 CDS YP_003633098.1 296125846 9141780 complement(952994..953752) 1 NC_014150.1 PFAM: formate/nitrite transporter; KEGG: cbk:CLL_A3042 formate/nitrite family of transporter; formate/nitrite transporter 953752 9141780 Bmur_0800 Brachyspira murdochii DSM 12563 formate/nitrite transporter YP_003633098.1 952994 R 526224 CDS YP_003633099.1 296125847 9141781 953989..955374 1 NC_014150.1 PFAM: sodium:neurotransmitter symporter; KEGG: bhy:BHWA1_02461 Na+-dependent transporters of the SNF family; sodium:neurotransmitter symporter 955374 9141781 Bmur_0801 Brachyspira murdochii DSM 12563 sodium:neurotransmitter symporter YP_003633099.1 953989 D 526224 CDS YP_003633100.1 296125848 9141782 955496..955834 1 NC_014150.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_00898 cupin domain containing protein; cupin 955834 9141782 Bmur_0802 Brachyspira murdochii DSM 12563 cupin YP_003633100.1 955496 D 526224 CDS YP_003633101.1 296125849 9141783 955996..956667 1 NC_014150.1 KEGG: bhy:BHWA1_00897 hypothetical protein; hypothetical protein 956667 9141783 Bmur_0803 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633101.1 955996 D 526224 CDS YP_003633102.1 296125850 9141784 956696..957703 1 NC_014150.1 KEGG: bhy:BHWA1_00896 Na+/Ca+ exchange protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter 957703 9141784 Bmur_0804 Brachyspira murdochii DSM 12563 CaCA family Na+/Ca+ antiporter YP_003633102.1 956696 D 526224 CDS YP_003633103.1 296125851 9141785 957779..958591 1 NC_014150.1 PFAM: Thioredoxin domain; KEGG: bhy:BHWA1_02614 thiol-disulfide interchange protein DsbD-like protein; thioredoxin 958591 9141785 Bmur_0805 Brachyspira murdochii DSM 12563 thioredoxin YP_003633103.1 957779 D 526224 CDS YP_003633104.1 296125852 9141786 958643..959467 1 NC_014150.1 PFAM: protein of unknown function DUF255; Thioredoxin domain; KEGG: bhy:BHWA1_02615 thiol-disulfide interchange protein DsbD-like protein; hypothetical protein 959467 9141786 Bmur_0806 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633104.1 958643 D 526224 CDS YP_003633105.1 296125853 9141787 959614..960510 1 NC_014150.1 KEGG: bhy:BHWA1_00754 hypothetical protein; hypothetical protein 960510 9141787 Bmur_0807 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633105.1 959614 D 526224 CDS YP_003633106.1 296125854 9141788 960514..961518 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_02616 glycosyl transferase 2 protein; glycosyl transferase 961518 9141788 Bmur_0808 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633106.1 960514 D 526224 CDS YP_003633107.1 296125855 9141789 961673..963262 1 NC_014150.1 KEGG: bhy:BHWA1_02451 TPR domain-containing protein; hypothetical protein 963262 9141789 Bmur_0809 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633107.1 961673 D 526224 CDS YP_003633108.1 296125856 9141790 complement(963267..964211) 1 NC_014150.1 PFAM: alpha/beta hydrolase fold; KEGG: bhy:BHWA1_02452 hypothetical protein; alpha/beta hydrolase 964211 9141790 Bmur_0810 Brachyspira murdochii DSM 12563 alpha/beta hydrolase YP_003633108.1 963267 R 526224 CDS YP_003633109.1 296125857 9141791 complement(964352..965710) 1 NC_014150.1 PFAM: glycoside hydrolase 4; KEGG: bhy:BHWA1_01142 glycoside hydrolase 4; glycoside hydrolase 4 965710 9141791 Bmur_0811 Brachyspira murdochii DSM 12563 glycoside hydrolase 4 YP_003633109.1 964352 R 526224 CDS YP_003633110.1 296125858 9141792 complement(965770..966801) 1 NC_014150.1 KEGG: bhy:BHWA1_01146 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein 966801 9141792 Bmur_0812 Brachyspira murdochii DSM 12563 metal-dependent phosphohydrolase HD sub domain-containing protein YP_003633110.1 965770 R 526224 CDS YP_003633111.1 296125859 9141793 complement(966882..967952) 1 NC_014150.1 KEGG: bhy:BHWA1_01200 hypothetical protein; hypothetical protein 967952 9141793 Bmur_0813 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633111.1 966882 R 526224 CDS YP_003633112.1 296125860 9141794 complement(968001..968501) 1 NC_014150.1 KEGG: bhy:BHWA1_00924 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 968501 9141794 Bmur_0814 Brachyspira murdochii DSM 12563 lipoprotein YP_003633112.1 968001 R 526224 CDS YP_003633113.1 296125861 9141795 complement(968519..970807) 1 NC_014150.1 KEGG: bhy:BHWA1_00969 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 970807 9141795 Bmur_0815 Brachyspira murdochii DSM 12563 lipoprotein YP_003633113.1 968519 R 526224 CDS YP_003633114.1 296125862 9141796 complement(970818..971822) 1 NC_014150.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bhy:BHWA1_00925 segregation and condensation protein A; chromosome segregation and condensation protein ScpA 971822 9141796 Bmur_0816 Brachyspira murdochii DSM 12563 chromosome segregation and condensation protein ScpA YP_003633114.1 970818 R 526224 CDS YP_003633115.1 296125863 9141797 971946..972926 1 NC_014150.1 PFAM: oxidoreductase domain protein; KEGG: bhy:BHWA1_00926 oxidoreductase domain containing protein; oxidoreductase domain-containing protein 972926 9141797 Bmur_0817 Brachyspira murdochii DSM 12563 oxidoreductase domain-containing protein YP_003633115.1 971946 D 526224 CDS YP_003633116.1 296125864 9141798 complement(973042..974913) 1 NC_014150.1 KEGG: bhy:BHWA1_01226 hypothetical protein; hypothetical protein 974913 9141798 Bmur_0818 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633116.1 973042 R 526224 CDS YP_003633117.1 296125865 9141799 complement(974931..975551) 1 NC_014150.1 KEGG: bhy:BHWA1_01225 hypothetical protein; hypothetical protein 975551 9141799 Bmur_0819 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633117.1 974931 R 526224 CDS YP_003633118.1 296125866 9141800 complement(976003..977403) 1 NC_014150.1 KEGG: bhy:BHWA1_01224 glutamate synthase (DPH); TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase (NADPH), homotetrameric 977403 9141800 Bmur_0820 Brachyspira murdochii DSM 12563 glutamate synthase (NADPH), homotetrameric YP_003633118.1 976003 R 526224 CDS YP_003633119.1 296125867 9141801 977811..978002 1 NC_014150.1 KEGG: bhy:BHWA1_01222 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 978002 9141801 Bmur_0821 Brachyspira murdochii DSM 12563 50S ribosomal protein L28 YP_003633119.1 977811 D 526224 CDS YP_003633120.1 296125868 9141802 978027..979778 1 NC_014150.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: bhy:BHWA1_01221 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 979778 9141802 Bmur_0822 Brachyspira murdochii DSM 12563 hydroxymethylbutenyl pyrophosphate reductase YP_003633120.1 978027 D 526224 CDS YP_003633121.1 296125869 9141803 complement(979866..980687) 1 NC_014150.1 KEGG: bhy:BHWA1_01220 hypothetical protein; hypothetical protein 980687 9141803 Bmur_0823 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633121.1 979866 R 526224 CDS YP_003633122.1 296125870 9141804 980843..981379 1 NC_014150.1 KEGG: bhy:BHWA1_01219 TPR domain-containing protein; hypothetical protein 981379 9141804 Bmur_0824 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633122.1 980843 D 526224 CDS YP_003633123.1 296125871 9141806 complement(981570..983246) 1 NC_014150.1 PFAM: ABC transporter; KEGG: bhy:BHWA1_01217 AarF, predicted unusual protein kinase; ABC transporter 983246 9141806 Bmur_0825 Brachyspira murdochii DSM 12563 ABC transporter YP_003633123.1 981570 R 526224 CDS YP_003633124.1 296125872 9141807 complement(983341..983655) 1 NC_014150.1 KEGG: bhy:BHWA1_01216 hypothetical protein; hypothetical protein 983655 9141807 Bmur_0826 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633124.1 983341 R 526224 CDS YP_003633125.1 296125873 9141808 complement(983785..983997) 1 NC_014150.1 KEGG: bhy:BHWA1_01215 hypothetical protein; hypothetical protein 983997 9141808 Bmur_0827 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633125.1 983785 R 526224 CDS YP_003633126.1 296125874 9141809 complement(984020..984817) 1 NC_014150.1 PFAM: TM2 domain containing protein; KEGG: bhy:BHWA1_01214 TM2 domain containing protein; TM2 domain-containing protein 984817 9141809 Bmur_0828 Brachyspira murdochii DSM 12563 TM2 domain-containing protein YP_003633126.1 984020 R 526224 CDS YP_003633127.1 296125875 9141810 984966..985706 1 NC_014150.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bhy:BHWA1_01213 hypothetical protein; DNA methylase N-4/N-6 domain-containing protein 985706 9141810 Bmur_0829 Brachyspira murdochii DSM 12563 DNA methylase N-4/N-6 domain-containing protein YP_003633127.1 984966 D 526224 CDS YP_003633128.1 296125876 9141811 complement(985835..989929) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_01212 hypothetical protein; hypothetical protein 989929 9141811 Bmur_0830 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633128.1 985835 R 526224 CDS YP_003633129.1 296125877 9141812 complement(990035..990457) 1 NC_014150.1 KEGG: bhy:BHWA1_01211 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit- like; ATP synthase F1 subunit epsilon 990457 9141812 Bmur_0831 Brachyspira murdochii DSM 12563 ATP synthase F1 subunit epsilon YP_003633129.1 990035 R 526224 CDS YP_003633130.1 296125878 9141813 complement(990474..990779) 1 NC_014150.1 KEGG: bhy:BHWA1_01210 hypothetical protein; hypothetical protein 990779 9141813 Bmur_0832 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633130.1 990474 R 526224 CDS YP_003633131.1 296125879 9141814 complement(990810..991223) 1 NC_014150.1 PFAM: thioesterase; KEGG: bhy:BHWA1_01209 FcbC, predicted thioesterase; thioesterase 991223 9141814 Bmur_0833 Brachyspira murdochii DSM 12563 thioesterase YP_003633131.1 990810 R 526224 CDS YP_003633132.1 296125880 9141815 991412..991897 1 NC_014150.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bhy:BHWA1_01208 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 991897 9141815 Bmur_0834 Brachyspira murdochii DSM 12563 pantetheine-phosphate adenylyltransferase YP_003633132.1 991412 D 526224 CDS YP_003633133.1 296125881 9141816 992124..993431 1 NC_014150.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bhy:BHWA1_01207 MiaB, 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 993431 9141816 Bmur_0835 Brachyspira murdochii DSM 12563 MiaB family RNA modification protein YP_003633133.1 992124 D 526224 CDS YP_003633134.1 296125882 9141817 993449..994057 1 NC_014150.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: bhy:BHWA1_01206 phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 994057 9141817 Bmur_0836 Brachyspira murdochii DSM 12563 4'-phosphopantetheinyl transferase YP_003633134.1 993449 D 526224 CDS YP_003633135.1 296125883 9141818 994151..995149 1 NC_014150.1 KEGG: bhy:BHWA1_01205 hypothetical protein; hypothetical protein 995149 9141818 Bmur_0837 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633135.1 994151 D 526224 CDS YP_003633136.1 296125884 9141819 complement(995146..996591) 1 NC_014150.1 KEGG: bhy:BHWA1_01204 hypothetical protein; hypothetical protein 996591 9141819 Bmur_0838 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633136.1 995146 R 526224 CDS YP_003633137.1 296125885 9141820 996782..997093 1 NC_014150.1 KEGG: bhy:BHWA1_01203 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 997093 9141820 Bmur_0839 Brachyspira murdochii DSM 12563 50S ribosomal protein L21 YP_003633137.1 996782 D 526224 CDS YP_003633138.1 296125886 9141821 997093..997449 1 NC_014150.1 PFAM: protein of unknown function DUF464; KEGG: bhy:BHWA1_01202 hypothetical protein; hypothetical protein 997449 9141821 Bmur_0840 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633138.1 997093 D 526224 CDS YP_003633139.1 296125887 9141822 997439..997693 1 NC_014150.1 KEGG: bhy:BHWA1_01201 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 997693 9141822 Bmur_0841 Brachyspira murdochii DSM 12563 50S ribosomal protein L27 YP_003633139.1 997439 D 526224 CDS YP_003633140.1 296125888 9141823 997805..998551 1 NC_014150.1 KEGG: mar:MAE_61040 hypothetical protein; hypothetical protein 998551 9141823 Bmur_0842 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633140.1 997805 D 526224 CDS YP_003633141.1 296125889 9141824 998555..999793 1 NC_014150.1 KEGG: dfe:Dfer_0931 adenine-specific DNA methylase; Site-specific DNA-methyltransferase (cytosine- N(4)-specific) 999793 9141824 Bmur_0843 Brachyspira murdochii DSM 12563 Site-specific DNA-methyltransferase (cytosine- N(4)-specific) YP_003633141.1 998555 D 526224 CDS YP_003633142.1 296125890 9141825 999853..1000929 1 NC_014150.1 KEGG: bhy:BHWA1_01186 PRK00943: selenophosphate synthetase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; selenide, water dikinase 1000929 9141825 Bmur_0844 Brachyspira murdochii DSM 12563 selenide, water dikinase YP_003633142.1 999853 D 526224 CDS YP_003633143.1 296125891 9141826 complement(1001356..1001904) 1 NC_014150.1 KEGG: bhy:BHWA1_01194 hypothetical protein; hypothetical protein 1001904 9141826 Bmur_0845 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633143.1 1001356 R 526224 CDS YP_003633144.1 296125892 9141827 complement(1001980..1002489) 1 NC_014150.1 PFAM: nitroreductase; KEGG: bhy:BHWA1_01193 DPH oxidoreductase 1, D(P)H; nitroreductase 1002489 9141827 Bmur_0846 Brachyspira murdochii DSM 12563 nitroreductase YP_003633144.1 1001980 R 526224 CDS YP_003633145.1 296125893 9141828 1002745..1003281 1 NC_014150.1 KEGG: bhy:BHWA1_01191 hypothetical protein; hypothetical protein 1003281 9141828 Bmur_0847 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633145.1 1002745 D 526224 CDS YP_003633146.1 296125894 9141829 1003313..1004632 1 NC_014150.1 PFAM: toxic anion resistance family protein; KEGG: bhy:BHWA1_01190 toxic anion resistance protein (TelA); toxic anion resistance family protein 1004632 9141829 Bmur_0848 Brachyspira murdochii DSM 12563 toxic anion resistance family protein YP_003633146.1 1003313 D 526224 CDS YP_003633147.1 296125895 9141830 complement(1004711..1005991) 1 NC_014150.1 KEGG: bhy:BHWA1_01199 hypothetical protein; hypothetical protein 1005991 9141830 Bmur_0849 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633147.1 1004711 R 526224 CDS YP_003633148.1 296125896 9141831 complement(1006306..1007724) 1 NC_014150.1 KEGG: bhy:BHWA1_01198 hypothetical protein; hypothetical protein 1007724 9141831 Bmur_0850 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633148.1 1006306 R 526224 CDS YP_003633149.1 296125897 9141832 complement(1008153..1009466) 1 NC_014150.1 KEGG: bhy:BHWA1_01197 hypothetical protein; hypothetical protein 1009466 9141832 Bmur_0851 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633149.1 1008153 R 526224 CDS YP_003633150.1 296125898 9141833 complement(1009574..1009963) 1 NC_014150.1 KEGG: bhy:BHWA1_01796 hypothetical protein; hypothetical protein 1009963 9141833 Bmur_0852 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633150.1 1009574 R 526224 CDS YP_003633151.1 296125899 9141834 complement(1010013..1010465) 1 NC_014150.1 KEGG: bhy:BHWA1_01196 hypothetical protein; hypothetical protein 1010465 9141834 Bmur_0853 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633151.1 1010013 R 526224 CDS YP_003633152.1 296125900 9141835 complement(1011044..1012429) 1 NC_014150.1 PFAM: sodium:neurotransmitter symporter; KEGG: bhy:BHWA1_01189 Na+-dependent transporter of the SNF family; sodium:neurotransmitter symporter 1012429 9141835 Bmur_0854 Brachyspira murdochii DSM 12563 sodium:neurotransmitter symporter YP_003633152.1 1011044 R 526224 CDS YP_003633153.1 296125901 9141836 complement(1012485..1013048) 1 NC_014150.1 KEGG: bhy:BHWA1_01188 hypothetical protein; hypothetical protein 1013048 9141836 Bmur_0855 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633153.1 1012485 R 526224 CDS YP_003633154.1 296125902 9141837 1013308..1016283 1 NC_014150.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: bhy:BHWA1_01187 pyruvate phosphate dikinase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; pyruvate phosphate dikinase PEP/pyruvate- binding; pyruvate, phosphate dikinase 1016283 9141837 Bmur_0856 Brachyspira murdochii DSM 12563 pyruvate, phosphate dikinase YP_003633154.1 1013308 D 526224 CDS YP_003633155.1 296125903 9141838 complement(1016365..1017222) 1 NC_014150.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_00860 hypothetical protein; hypothetical protein 1017222 9141838 Bmur_0857 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633155.1 1016365 R 526224 CDS YP_003633156.1 296125904 9141839 1017523..1020465 1 NC_014150.1 KEGG: bhy:BHWA1_00872 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; Preprotein translocase subunit SecA 1020465 9141839 Bmur_0858 Brachyspira murdochii DSM 12563 Preprotein translocase subunit SecA YP_003633156.1 1017523 D 526224 CDS YP_003633157.1 296125905 9141840 complement(1020649..1021860) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1021860 9141840 Bmur_0859 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633157.1 1020649 R 526224 CDS YP_003633158.1 296125906 9141841 1022408..1022986 1 NC_014150.1 KEGG: bhy:BHWA1_01227 hypothetical protein; hypothetical protein 1022986 9141841 Bmur_0860 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633158.1 1022408 D 526224 CDS YP_003633159.1 296125907 9141842 complement(1023049..1025535) 1 NC_014150.1 KEGG: bhy:BHWA1_01228 hemolysin B; ClpA, ATPases with chaperone activity, ATP-binding subunit; PFAM: ATPase AAA; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; ATPase AAA; SMART: AAA ATPase; ATPase AAA 1025535 9141842 Bmur_0861 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633159.1 1023049 R 526224 CDS YP_003633160.1 296125908 9141843 complement(1025713..1026042) 1 NC_014150.1 KEGG: bhy:BHWA1_01229 hypothetical protein; hypothetical protein 1026042 9141843 Bmur_0862 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633160.1 1025713 R 526224 CDS YP_003633161.1 296125909 9141844 complement(1026039..1026611) 1 NC_014150.1 KEGG: bhy:BHWA1_01230 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1026611 9141844 Bmur_0863 Brachyspira murdochii DSM 12563 ECF subfamily RNA polymerase sigma-24 subunit YP_003633161.1 1026039 R 526224 CDS YP_003633162.1 296125910 9141845 complement(1026691..1028505) 1 NC_014150.1 KEGG: bhy:BHWA1_01231 membrane-associated ATP- dependent Clp protease ATP-binding subunit; PFAM: ATPase AAA; SMART: AAA ATPase; ATPase AAA 1028505 9141845 Bmur_0864 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633162.1 1026691 R 526224 CDS YP_003633163.1 296125911 9141846 complement(1028523..1029845) 1 NC_014150.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bhy:BHWA1_01232 MiaB, 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme YliG 1029845 9141846 Bmur_0865 Brachyspira murdochii DSM 12563 MiaB-like tRNA modifying enzyme YliG YP_003633163.1 1028523 R 526224 CDS YP_003633164.1 296125912 9141847 complement(1029985..1031310) 1 NC_014150.1 KEGG: bhy:BHWA1_01233 hypothetical protein; hypothetical protein 1031310 9141847 Bmur_0866 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633164.1 1029985 R 526224 CDS YP_003633165.1 296125913 9141848 complement(1031326..1032063) 1 NC_014150.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bhy:BHWA1_01234 hypothetical protein; outer membrane lipoprotein carrier protein LolA 1032063 9141848 Bmur_0867 Brachyspira murdochii DSM 12563 outer membrane lipoprotein carrier protein LolA YP_003633165.1 1031326 R 526224 CDS YP_003633166.1 296125914 9141849 1032390..1032635 1 NC_014150.1 KEGG: bhy:BHWA1_01235 hypothetical protein; hypothetical protein 1032635 9141849 Bmur_0868 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633166.1 1032390 D 526224 CDS YP_003633167.1 296125915 9141850 1032657..1033001 1 NC_014150.1 KEGG: bhy:BHWA1_01236 hypothetical protein; hypothetical protein 1033001 9141850 Bmur_0869 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633167.1 1032657 D 526224 CDS YP_003633168.1 296125916 9141851 complement(1033091..1033486) 1 NC_014150.1 KEGG: bhy:BHWA1_01237 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein 1033486 9141851 Bmur_0870 Brachyspira murdochii DSM 12563 Rhodanese domain-containing protein YP_003633168.1 1033091 R 526224 CDS YP_003633169.1 296125917 9141852 1033661..1033816 1 NC_014150.1 KEGG: bhy:BHWA1_01238 hypothetical protein; hypothetical protein 1033816 9141852 Bmur_0871 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633169.1 1033661 D 526224 CDS YP_003633170.1 296125918 9141853 1033847..1034758 1 NC_014150.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_01239 protein of unknown function DUF6, transmembrane; hypothetical protein 1034758 9141853 Bmur_0872 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633170.1 1033847 D 526224 CDS YP_003633171.1 296125919 9141854 complement(1034833..1035516) 1 NC_014150.1 PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; KEGG: bhy:BHWA1_01240 endonuclease III; SMART: HhH-GPD family protein; iron-sulfur cluster loop; Helix-hairpin-helix DNA-binding class 1; DNA-(apurinic or apyrimidinic site) lyase 1035516 9141854 Bmur_0873 Brachyspira murdochii DSM 12563 DNA-(apurinic or apyrimidinic site) lyase YP_003633171.1 1034833 R 526224 CDS YP_003633172.1 296125920 9141855 complement(1035545..1036597) 1 NC_014150.1 KEGG: bhy:BHWA1_01241 hypothetical protein; hypothetical protein 1036597 9141855 Bmur_0874 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633172.1 1035545 R 526224 CDS YP_003633173.1 296125921 9141856 complement(1036743..1037504) 1 NC_014150.1 KEGG: bhy:BHWA1_01242 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase 1037504 9141856 Bmur_0875 Brachyspira murdochii DSM 12563 triosephosphate isomerase YP_003633173.1 1036743 R 526224 CDS YP_003633174.1 296125922 9141857 complement(1037534..1038094) 1 NC_014150.1 PFAM: isochorismatase hydrolase; KEGG: bhy:BHWA1_01243 isochorismatase hydrolase; isochorismatase hydrolase 1038094 9141857 Bmur_0876 Brachyspira murdochii DSM 12563 isochorismatase hydrolase YP_003633174.1 1037534 R 526224 CDS YP_003633175.1 296125923 9141858 complement(1038227..1039174) 1 NC_014150.1 PFAM: flagellar filament outer layer protein FlaA; KEGG: bhy:BHWA1_01244 flagellar filament outer layer protein FlaA; flagellar filament outer layer protein FlaA 1039174 9141858 Bmur_0877 Brachyspira murdochii DSM 12563 flagellar filament outer layer protein FlaA YP_003633175.1 1038227 R 526224 CDS YP_003633176.1 296125924 9141859 1039360..1040376 1 NC_014150.1 KEGG: bhy:BHWA1_01245 hypothetical protein; hypothetical protein 1040376 9141859 Bmur_0878 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633176.1 1039360 D 526224 CDS YP_003633177.1 296125925 9141860 complement(1040390..1041373) 1 NC_014150.1 PFAM: glycosyl transferase 9; KEGG: bhy:BHWA1_01247 RfaF, ADP-heptose:LPS heptosyltransferase; glycosyl transferase 1041373 9141860 Bmur_0879 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633177.1 1040390 R 526224 CDS YP_003633178.1 296125926 9141861 complement(1041404..1042177) 1 NC_014150.1 KEGG: bhy:BHWA1_01248 hypothetical protein; hypothetical protein 1042177 9141861 Bmur_0880 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633178.1 1041404 R 526224 CDS YP_003633179.1 296125927 9141862 complement(1042187..1042873) 1 NC_014150.1 KEGG: bhy:BHWA1_01249 hypothetical protein; hypothetical protein 1042873 9141862 Bmur_0881 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633179.1 1042187 R 526224 CDS YP_003633180.1 296125928 9141863 1043109..1043780 1 NC_014150.1 KEGG: bhy:BHWA1_01250 hypothetical protein; hypothetical protein 1043780 9141863 Bmur_0882 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633180.1 1043109 D 526224 CDS YP_003633181.1 296125929 9141864 1043786..1044289 1 NC_014150.1 KEGG: bhy:BHWA1_01251 hypothetical protein; hypothetical protein 1044289 9141864 Bmur_0883 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633181.1 1043786 D 526224 CDS YP_003633182.1 296125930 9141865 1044702..1045949 1 NC_014150.1 KEGG: bhy:BHWA1_01252 FtsA, actin-like ATPase involved in cell division; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; cell division protein FtsA 1045949 9141865 Bmur_0884 Brachyspira murdochii DSM 12563 cell division protein FtsA YP_003633182.1 1044702 D 526224 CDS YP_003633183.1 296125931 9141866 join(1046127..1046528,1046528..1047067) 1 NC_014150.1 KEGG: bhy:BHWA1_00119 hypothetical protein; manually curated; hypothetical protein 1047067 9141866 Bmur_0885 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633183.1 1046127 D 526224 CDS YP_003633184.1 296125932 9141867 1047269..1047784 1 NC_014150.1 PFAM: Domain of unknown function DUF1877; KEGG: bhy:BHWA1_01254 hypothetical protein; hypothetical protein 1047784 9141867 Bmur_0886 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633184.1 1047269 D 526224 CDS YP_003633185.1 296125933 9141868 1047856..1048419 1 NC_014150.1 KEGG: bhy:BHWA1_01255 hypothetical protein; hypothetical protein 1048419 9141868 Bmur_0887 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633185.1 1047856 D 526224 CDS YP_003633186.1 296125934 9141869 complement(1048433..1049293) 1 NC_014150.1 PFAM: protein of unknown function DUF368; KEGG: bhy:BHWA1_01256 protein of unknown function DUF368, transmembrane; hypothetical protein 1049293 9141869 Bmur_0888 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633186.1 1048433 R 526224 CDS YP_003633187.1 296125935 9141870 complement(1049460..1050794) 1 NC_014150.1 KEGG: bhy:BHWA1_01295 hypothetical protein; hypothetical protein 1050794 9141870 Bmur_0889 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633187.1 1049460 R 526224 CDS YP_003633188.1 296125936 9141871 complement(1051246..1052484) 1 NC_014150.1 PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_01294 GltP, Na+/H+-dicarboxylate symporter; sodium:dicarboxylate symporter 1052484 9141871 Bmur_0890 Brachyspira murdochii DSM 12563 sodium:dicarboxylate symporter YP_003633188.1 1051246 R 526224 CDS YP_003633189.1 296125937 9141872 1052668..1053147 1 NC_014150.1 TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; KEGG: bhy:BHWA1_01293 2-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1053147 9141872 Bmur_0891 Brachyspira murdochii DSM 12563 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_003633189.1 1052668 D 526224 CDS YP_003633190.1 296125938 9141873 1053160..1054152 1 NC_014150.1 PFAM: squalene/phytoene synthase; KEGG: bhy:BHWA1_01292 SQS PSY, squalene/phytoene synthase-like protein; squalene/phytoene synthase 1054152 9141873 Bmur_0892 Brachyspira murdochii DSM 12563 squalene/phytoene synthase YP_003633190.1 1053160 D 526224 CDS YP_003633191.1 296125939 9141874 1054269..1056191 1 NC_014150.1 PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; KEGG: bhy:BHWA1_01291 TPR domain-containing protein; hypothetical protein 1056191 9141874 Bmur_0893 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633191.1 1054269 D 526224 CDS YP_003633192.1 296125940 9141875 1056237..1056959 1 NC_014150.1 KEGG: bhy:BHWA1_01290 hypothetical protein; hypothetical protein 1056959 9141875 Bmur_0894 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633192.1 1056237 D 526224 CDS YP_003633193.1 296125941 9141876 1056967..1057575 1 NC_014150.1 KEGG: bhy:BHWA1_01289 glucose-inhibited division protein B; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 1057575 9141876 Bmur_0895 Brachyspira murdochii DSM 12563 methyltransferase GidB YP_003633193.1 1056967 D 526224 CDS YP_003633194.1 296125942 9141877 complement(1057572..1058576) 1 NC_014150.1 PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_01288 hypothetical protein; hypothetical protein 1058576 9141877 Bmur_0896 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633194.1 1057572 R 526224 CDS YP_003633195.1 296125943 9141878 complement(1058589..1060106) 1 NC_014150.1 KEGG: bhy:BHWA1_01287 hypothetical protein; hypothetical protein 1060106 9141878 Bmur_0897 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633195.1 1058589 R 526224 CDS YP_003633196.1 296125944 9141879 complement(1060214..1061035) 1 NC_014150.1 KEGG: bhy:BHWA1_01286 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; hypothetical protein 1061035 9141879 Bmur_0898 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633196.1 1060214 R 526224 CDS YP_003633197.1 296125945 9141880 complement(1061116..1062237) 1 NC_014150.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; KEGG: bhy:BHWA1_01285 queuine tR-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1062237 9141880 Bmur_0899 Brachyspira murdochii DSM 12563 queuine tRNA-ribosyltransferase YP_003633197.1 1061116 R 526224 CDS YP_003633198.1 296125946 9141882 complement(1064513..1064908) 1 NC_014150.1 KEGG: bhy:BHWA1_01282 hypothetical protein; hypothetical protein 1064908 9141882 Bmur_0901 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633198.1 1064513 R 526224 CDS YP_003633199.1 296125947 9141883 1065123..1066967 1 NC_014150.1 KEGG: bhy:BHWA1_01281 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1066967 9141883 Bmur_0902 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633199.1 1065123 D 526224 CDS YP_003633200.1 296125948 9141885 1068924..1069760 1 NC_014150.1 KEGG: bhy:BHWA1_01280 hypothetical protein; hypothetical protein 1069760 9141885 Bmur_0904 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633200.1 1068924 D 526224 CDS YP_003633201.1 296125949 9141886 1069906..1070115 1 NC_014150.1 KEGG: bhy:BHWA1_01279 hypothetical protein; hypothetical protein 1070115 9141886 Bmur_0905 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633201.1 1069906 D 526224 CDS YP_003633202.1 296125950 9141887 1070160..1070648 1 NC_014150.1 KEGG: bhy:BHWA1_01278 hypothetical protein; hypothetical protein 1070648 9141887 Bmur_0906 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633202.1 1070160 D 526224 CDS YP_003633203.1 296125951 9141888 1070767..1071234 1 NC_014150.1 KEGG: bhy:BHWA1_01277 hypothetical protein; hypothetical protein 1071234 9141888 Bmur_0907 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633203.1 1070767 D 526224 CDS YP_003633204.1 296125952 9141889 complement(1071255..1071830) 1 NC_014150.1 KEGG: bhy:BHWA1_01276 hypothetical protein; hypothetical protein 1071830 9141889 Bmur_0908 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633204.1 1071255 R 526224 CDS YP_003633205.1 296125953 9141890 complement(1071833..1072321) 1 NC_014150.1 KEGG: bhy:BHWA1_01275 hypothetical protein; hypothetical protein 1072321 9141890 Bmur_0909 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633205.1 1071833 R 526224 CDS YP_003633206.1 296125954 9141891 complement(1072538..1073011) 1 NC_014150.1 KEGG: bhy:BHWA1_01275 hypothetical protein; hypothetical protein 1073011 9141891 Bmur_0910 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633206.1 1072538 R 526224 CDS YP_003633207.1 296125955 9141892 1073167..1074051 1 NC_014150.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_00721 hypothetical hypothetical protein; hypothetical protein 1074051 9141892 Bmur_0911 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633207.1 1073167 D 526224 CDS YP_003633208.1 296125956 9141893 complement(1074048..1074227) 1 NC_014150.1 KEGG: bhy:BHWA1_01274 hypothetical protein; hypothetical protein 1074227 9141893 Bmur_0912 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633208.1 1074048 R 526224 CDS YP_003633209.1 296125957 9141894 complement(1074298..1075377) 1 NC_014150.1 KEGG: bhy:BHWA1_01273 hypothetical protein; hypothetical protein 1075377 9141894 Bmur_0913 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633209.1 1074298 R 526224 CDS YP_003633210.1 296125958 9141895 complement(1075418..1076221) 1 NC_014150.1 KEGG: bhy:BHWA1_01272 hypothetical protein; hypothetical protein 1076221 9141895 Bmur_0914 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633210.1 1075418 R 526224 CDS YP_003633211.1 296125959 9141896 complement(1076267..1078669) 1 NC_014150.1 KEGG: bhy:BHWA1_01271 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; multi-sensor signal transduction histidine kinase 1078669 9141896 Bmur_0915 Brachyspira murdochii DSM 12563 multi-sensor signal transduction histidine kinase YP_003633211.1 1076267 R 526224 CDS YP_003633212.1 296125960 9141897 complement(1078719..1080149) 1 NC_014150.1 KEGG: bhy:BHWA1_01270 alpha amylase, catalytic domain protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 1080149 9141897 Bmur_0916 Brachyspira murdochii DSM 12563 alpha amylase YP_003633212.1 1078719 R 526224 CDS YP_003633213.1 296125961 9141898 1080589..1081293 1 NC_014150.1 SMART: response regulator receiver; KEGG: bhy:BHWA1_01269 two component transcriptional regulator, winged helix family; response regulator receiver protein 1081293 9141898 Bmur_0917 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003633213.1 1080589 D 526224 CDS YP_003633214.1 296125962 9141899 1081305..1082114 1 NC_014150.1 KEGG: bhy:BHWA1_01268 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1082114 9141899 Bmur_0918 Brachyspira murdochii DSM 12563 phosphomethylpyrimidine kinase YP_003633214.1 1081305 D 526224 CDS YP_003633215.1 296125963 9141900 complement(1082181..1082927) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1082927 9141900 Bmur_0919 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633215.1 1082181 R 526224 CDS YP_003633216.1 296125964 9141901 complement(1082914..1084296) 1 NC_014150.1 KEGG: pgi:PG0545 hypothetical protein; hypothetical protein 1084296 9141901 Bmur_0920 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633216.1 1082914 R 526224 CDS YP_003633217.1 296125965 9141902 complement(1084316..1086346) 1 NC_014150.1 PFAM: N-6 DNA methylase; protein of unknown function DUF450; KEGG: syp:SYNPCC7002_F0089 type I restriction modification system, N-6 DNA methylase; N-6 DNA methylase 1086346 9141902 Bmur_0921 Brachyspira murdochii DSM 12563 N-6 DNA methylase YP_003633217.1 1084316 R 526224 CDS YP_003633218.1 296125966 9141903 complement(1086412..1087524) 1 NC_014150.1 KEGG: bhy:BHWA1_02572 hypothetical protein; hypothetical protein 1087524 9141903 Bmur_0922 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633218.1 1086412 R 526224 CDS YP_003633219.1 296125967 9141904 1087707..1088750 1 NC_014150.1 PFAM: extracellular solute-binding protein family 1; KEGG: bhy:BHWA1_02571 periplasmic-iron-binding protein BitB; ABC transporter substrate-binding protein 1088750 9141904 Bmur_0923 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633219.1 1087707 D 526224 CDS YP_003633220.1 296125968 9141905 1088814..1089818 1 NC_014150.1 PFAM: extracellular solute-binding protein family 1; KEGG: bhy:BHWA1_02570 periplasmic-iron-binding protein BitB; ABC transporter substrate-binding protein 1089818 9141905 Bmur_0924 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633220.1 1088814 D 526224 CDS YP_003633221.1 296125969 9141906 1089895..1091559 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02569 binding-protein-dependent transport system, inner membrane component; binding-protein-dependent transport system inner membrane protein 1091559 9141906 Bmur_0925 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003633221.1 1089895 D 526224 CDS YP_003633222.1 296125970 9141907 complement(1091818..1092054) 1 NC_014150.1 KEGG: bhy:BHWA1_02568 hypothetical protein; hypothetical protein 1092054 9141907 Bmur_0926 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633222.1 1091818 R 526224 CDS YP_003633223.1 296125971 9141908 complement(1092080..1092847) 1 NC_014150.1 KEGG: bhy:BHWA1_02567 biotin-(acetyl-CoA carboxylase) ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; biotin--acetyl-CoA-carboxylase ligase 1092847 9141908 Bmur_0927 Brachyspira murdochii DSM 12563 biotin--acetyl-CoA-carboxylase ligase YP_003633223.1 1092080 R 526224 CDS YP_003633224.1 296125972 9141909 1093032..1093796 1 NC_014150.1 KEGG: bhy:BHWA1_02566 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 1093796 9141909 Bmur_0928 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633224.1 1093032 D 526224 CDS YP_003633225.1 296125973 9141910 complement(1093908..1094642) 1 NC_014150.1 KEGG: bhy:BHWA1_01266 hypothetical protein; hypothetical protein 1094642 9141910 Bmur_0929 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633225.1 1093908 R 526224 CDS YP_003633226.1 296125974 9141911 complement(1094807..1096900) 1 NC_014150.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: bhy:BHWA1_01265 glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 1096900 9141911 Bmur_0930 Brachyspira murdochii DSM 12563 glycyl-tRNA synthetase subunit beta YP_003633226.1 1094807 R 526224 CDS YP_003633227.1 296125975 9141912 1097154..1098446 1 NC_014150.1 KEGG: bhy:BHWA1_01264 UDP-3-O-acyl-N- acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1098446 9141912 Bmur_0931 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003633227.1 1097154 D 526224 CDS YP_003633228.1 296125976 9141913 1098521..1099378 1 NC_014150.1 KEGG: bhy:BHWA1_01263 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-32 subunit RpoH 1099378 9141913 Bmur_0932 Brachyspira murdochii DSM 12563 RNA polymerase sigma-32 subunit RpoH YP_003633228.1 1098521 D 526224 CDS YP_003633229.1 296125977 9141914 1099507..1100748 1 NC_014150.1 KEGG: bhy:BHWA1_01262 hypothetical protein; hypothetical protein 1100748 9141914 Bmur_0933 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633229.1 1099507 D 526224 CDS YP_003633230.1 296125978 9141915 1100755..1101885 1 NC_014150.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: bhy:BHWA1_01261 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; oxygen-independent coproporphyrinogen III oxidase 1101885 9141915 Bmur_0934 Brachyspira murdochii DSM 12563 oxygen-independent coproporphyrinogen III oxidase YP_003633230.1 1100755 D 526224 CDS YP_003633231.1 296125979 9141916 complement(1101874..1102176) 1 NC_014150.1 PFAM: Trp repressor; KEGG: bhy:BHWA1_01260 hypothetical protein; Trp operon repressor 1102176 9141916 Bmur_0935 Brachyspira murdochii DSM 12563 Trp operon repressor YP_003633231.1 1101874 R 526224 CDS YP_003633232.1 296125980 9141917 1102339..1102920 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_01259 ankyrin repeat-containing protein; ankyrin 1102920 9141917 Bmur_0936 Brachyspira murdochii DSM 12563 ankyrin YP_003633232.1 1102339 D 526224 CDS YP_003633233.1 296125981 9141918 1103040..1104167 1 NC_014150.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: bhy:BHWA1_01258 DNA polymerase III beta (beta clamp) subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 1104167 9141918 Bmur_0937 Brachyspira murdochii DSM 12563 DNA polymerase III subunit beta YP_003633233.1 1103040 D 526224 CDS YP_003633234.1 296125982 9141919 1104190..1104378 1 NC_014150.1 KEGG: bhy:BHWA1_01257 hypothetical protein; hypothetical protein 1104378 9141919 Bmur_0938 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633234.1 1104190 D 526224 CDS YP_003633235.1 296125983 9141921 1104826..1105893 1 NC_014150.1 KEGG: bhy:BHWA1_02418 recombinational DNA repair ATPase (RecF pathway); TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 1105893 9141921 Bmur_0940 Brachyspira murdochii DSM 12563 DNA replication and repair protein RecF YP_003633235.1 1104826 D 526224 CDS YP_003633236.1 296125984 9141922 1105920..1106414 1 NC_014150.1 PFAM: protein of unknown function DUF285 lipoprotein; KEGG: bhy:BHWA1_00703 hypothetical protein; hypothetical protein 1106414 9141922 Bmur_0941 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633236.1 1105920 D 526224 CDS YP_003633237.1 296125985 9141923 1106682..1108907 1 NC_014150.1 KEGG: hhe:HH0050 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 1108907 9141923 Bmur_0942 Brachyspira murdochii DSM 12563 lipoprotein YP_003633237.1 1106682 D 526224 CDS YP_003633238.1 296125986 9141924 1109127..1111391 1 NC_014150.1 KEGG: bhy:BHWA1_01147 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 1111391 9141924 Bmur_0943 Brachyspira murdochii DSM 12563 lipoprotein YP_003633238.1 1109127 D 526224 CDS YP_003633239.1 296125987 9141925 1111792..1113621 1 NC_014150.1 KEGG: hhe:HH0050 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 1113621 9141925 Bmur_0944 Brachyspira murdochii DSM 12563 lipoprotein YP_003633239.1 1111792 D 526224 CDS YP_003633240.1 296125988 9141926 complement(1113772..1114815) 1 NC_014150.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bhy:BHWA1_02403 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 1114815 9141926 Bmur_0945 Brachyspira murdochii DSM 12563 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003633240.1 1113772 R 526224 CDS YP_003633241.1 296125989 9141927 1115180..1117741 1 NC_014150.1 TIGRFAM: alpha-glucan phosphorylase; KEGG: bhy:BHWA1_02402 alpha-glucan phosphorylase; PFAM: glycosyl transferase 35; alpha-glucan phosphorylase 1117741 9141927 Bmur_0946 Brachyspira murdochii DSM 12563 alpha-glucan phosphorylase YP_003633241.1 1115180 D 526224 CDS YP_003633242.1 296125990 9141928 1117848..1118546 1 NC_014150.1 PFAM: protein of unknown function DUF554; KEGG: bhy:BHWA1_02425 hypothetical protein; hypothetical protein 1118546 9141928 Bmur_0947 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633242.1 1117848 D 526224 CDS YP_003633243.1 296125991 9141929 complement(1118587..1119666) 1 NC_014150.1 KEGG: bhy:BHWA1_02414 ankyrin repeat-containing protein; ankyrin repeat-containing protein 1119666 9141929 Bmur_0948 Brachyspira murdochii DSM 12563 ankyrin repeat-containing protein YP_003633243.1 1118587 R 526224 CDS YP_003633244.1 296125992 9141930 1119875..1120294 1 NC_014150.1 KEGG: bhy:BHWA1_02413 hypothetical protein; hypothetical protein 1120294 9141930 Bmur_0949 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633244.1 1119875 D 526224 CDS YP_003633245.1 296125993 9141931 1120398..1120865 1 NC_014150.1 PFAM: TspO/MBR family protein; KEGG: taf:THA_1994 integral membrane protein; TspO and MBR-like protein 1120865 9141931 Bmur_0950 Brachyspira murdochii DSM 12563 TspO and MBR-like protein YP_003633245.1 1120398 D 526224 CDS YP_003633246.1 296125994 9141932 1120951..1123176 1 NC_014150.1 PFAM: glycoside hydrolase 2 TIM barrel; glycoside hydrolase 2 sugar binding; glycoside hydrolase 2 immunoglobulin domain protein beta- sandwich; KEGG: bhy:BHWA1_02412 beta-D-galactosidase; glycoside hydrolase 2 1123176 9141932 Bmur_0951 Brachyspira murdochii DSM 12563 glycoside hydrolase 2 YP_003633246.1 1120951 D 526224 CDS YP_003633247.1 296125995 9141933 1123570..1124010 1 NC_014150.1 KEGG: bhy:BHWA1_02411 HTH MarR, helix turn helix multiple antibiotic resistance protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 1124010 9141933 Bmur_0952 Brachyspira murdochii DSM 12563 MarR family transcriptional regulator YP_003633247.1 1123570 D 526224 CDS YP_003633248.1 296125996 9141934 1124077..1124517 1 NC_014150.1 KEGG: bhy:BHWA1_02410 hypothetical protein; hypothetical protein 1124517 9141934 Bmur_0953 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633248.1 1124077 D 526224 CDS YP_003633249.1 296125997 9141935 1124526..1125992 1 NC_014150.1 KEGG: bhy:BHWA1_02409 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1125992 9141935 Bmur_0954 Brachyspira murdochii DSM 12563 radical SAM protein YP_003633249.1 1124526 D 526224 CDS YP_003633250.1 296125998 9141936 1126160..1127113 1 NC_014150.1 PFAM: SurA domain; PpiC-type peptidyl-prolyl cis- trans isomerase; KEGG: bhy:BHWA1_02408 PpiC-type peptidyl-prolyl cis- trans isomerase; SurA domain-containing protein 1127113 9141936 Bmur_0955 Brachyspira murdochii DSM 12563 SurA domain-containing protein YP_003633250.1 1126160 D 526224 CDS YP_003633251.1 296125999 9141937 complement(1127261..1128214) 1 NC_014150.1 PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_01556 inner membrane translocator; inner-membrane translocator 1128214 9141937 Bmur_0956 Brachyspira murdochii DSM 12563 inner-membrane translocator YP_003633251.1 1127261 R 526224 CDS YP_003633252.1 296126000 9141938 complement(1128252..1129367) 1 NC_014150.1 PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_01555 inner-membrane-translocator; inner-membrane translocator 1129367 9141938 Bmur_0957 Brachyspira murdochii DSM 12563 inner-membrane translocator YP_003633252.1 1128252 R 526224 CDS YP_003633253.1 296126001 9141939 complement(1130122..1130979) 1 NC_014150.1 KEGG: bhy:BHWA1_00126 hypothetical protein; hypothetical protein 1130979 9141939 Bmur_0958 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633253.1 1130122 R 526224 CDS YP_003633254.1 296126002 9141940 complement(1131035..1132570) 1 NC_014150.1 KEGG: bhy:BHWA1_01553 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1132570 9141940 Bmur_0959 Brachyspira murdochii DSM 12563 ABC transporter YP_003633254.1 1131035 R 526224 CDS YP_003633255.1 296126003 9141941 complement(1132666..1133742) 1 NC_014150.1 PFAM: basic membrane lipoprotein; KEGG: bhy:BHWA1_01552 basic membrane lipoprotein; basic membrane lipoprotein 1133742 9141941 Bmur_0960 Brachyspira murdochii DSM 12563 basic membrane lipoprotein YP_003633255.1 1132666 R 526224 CDS YP_003633256.1 296126004 9141942 complement(1133804..1134880) 1 NC_014150.1 PFAM: basic membrane lipoprotein; KEGG: bhy:BHWA1_01549 basic membrane lipoprotein; basic membrane lipoprotein 1134880 9141942 Bmur_0961 Brachyspira murdochii DSM 12563 basic membrane lipoprotein YP_003633256.1 1133804 R 526224 CDS YP_003633257.1 296126005 9141943 complement(1134920..1135711) 1 NC_014150.1 PFAM: purine or other phosphorylase 1; KEGG: bhy:BHWA1_01548 uridine phosphorylase; purine or other phosphorylase 1 1135711 9141943 Bmur_0962 Brachyspira murdochii DSM 12563 purine or other phosphorylase 1 YP_003633257.1 1134920 R 526224 CDS YP_003633258.1 296126006 9141944 complement(1135714..1136529) 1 NC_014150.1 PFAM: purine or other phosphorylase 1; KEGG: bhy:BHWA1_01547 uridine phosphorylase; purine or other phosphorylase 1 1136529 9141944 Bmur_0963 Brachyspira murdochii DSM 12563 purine or other phosphorylase 1 YP_003633258.1 1135714 R 526224 CDS YP_003633259.1 296126007 9141945 complement(1136562..1137215) 1 NC_014150.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: bhy:BHWA1_01546 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 1137215 9141945 Bmur_0964 Brachyspira murdochii DSM 12563 deoxyribose-phosphate aldolase YP_003633259.1 1136562 R 526224 CDS YP_003633260.1 296126008 9141946 complement(1137432..1138550) 1 NC_014150.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bhy:BHWA1_01545 aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 1138550 9141946 Bmur_0965 Brachyspira murdochii DSM 12563 DegT/DnrJ/EryC1/StrS aminotransferase YP_003633260.1 1137432 R 526224 CDS YP_003633261.1 296126009 9141947 1138767..1139207 1 NC_014150.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bhy:BHWA1_01544 anti-sigma factor; anti-sigma regulatory factor, serine/threonine protein kinase 1139207 9141947 Bmur_0966 Brachyspira murdochii DSM 12563 anti-sigma regulatory factor, serine/threonine protein kinase YP_003633261.1 1138767 D 526224 CDS YP_003633262.1 296126010 9141948 complement(1139204..1140508) 1 NC_014150.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: bhy:BHWA1_01675 MATE efflux family protein; multi antimicrobial extrusion protein MatE 1140508 9141948 Bmur_0967 Brachyspira murdochii DSM 12563 multi antimicrobial extrusion protein MatE YP_003633262.1 1139204 R 526224 CDS YP_003633263.1 296126011 9141949 1140810..1141544 1 NC_014150.1 KEGG: bhy:BHWA1_01929 tRNA (guanine-N1)- methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 1141544 9141949 Bmur_0968 Brachyspira murdochii DSM 12563 tRNA (guanine-N(1)-)-methyltransferase YP_003633263.1 1140810 D 526224 CDS YP_003633264.1 296126012 9141950 1141544..1142035 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_01928 acetyltransferase; N-acetyltransferase GCN5 1142035 9141950 Bmur_0969 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003633264.1 1141544 D 526224 CDS YP_003633265.1 296126013 9141951 1142056..1142265 1 NC_014150.1 KEGG: bhy:BHWA1_02181 hypothetical protein; hypothetical protein 1142265 9141951 Bmur_0970 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633265.1 1142056 D 526224 CDS YP_003633266.1 296126014 9141952 1142412..1142867 1 NC_014150.1 KEGG: bhy:BHWA1_02180 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 1142867 9141952 Bmur_0971 Brachyspira murdochii DSM 12563 50S ribosomal protein L13 YP_003633266.1 1142412 D 526224 CDS YP_003633267.1 296126015 9141953 1142881..1143279 1 NC_014150.1 PFAM: ribosomal protein S9; KEGG: bhy:BHWA1_02179 30S ribosomal protein S9; 30S ribosomal protein S9 1143279 9141953 Bmur_0972 Brachyspira murdochii DSM 12563 30S ribosomal protein S9 YP_003633267.1 1142881 D 526224 CDS YP_003633268.1 296126016 9141954 1143322..1143687 1 NC_014150.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: bhy:BHWA1_02178 DNA-binding transcriptional regulator of transcription, DnaK suppressor protein; TraR/DksA family transcriptional regulator 1143687 9141954 Bmur_0973 Brachyspira murdochii DSM 12563 TraR/DksA family transcriptional regulator YP_003633268.1 1143322 D 526224 CDS YP_003633269.1 296126017 9141955 1143693..1145678 1 NC_014150.1 TIGRFAM: primosomal protein N'; PFAM: type III restriction protein res subunit; helicase domain protein; KEGG: bhy:BHWA1_02177 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 1145678 9141955 Bmur_0974 Brachyspira murdochii DSM 12563 primosomal protein N' YP_003633269.1 1143693 D 526224 CDS YP_003633270.1 296126018 9141956 complement(1145683..1146291) 1 NC_014150.1 TIGRFAM: DNA binding domain protein, excisionase; PFAM: response regulator receiver; KEGG: bhy:BHWA1_02176 two-component response regulator; SMART: response regulator receiver; response regulator receiver protein 1146291 9141956 Bmur_0975 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003633270.1 1145683 R 526224 CDS YP_003633271.1 296126019 9141957 1146606..1147676 1 NC_014150.1 KEGG: bhy:BHWA1_02175 mannose-1-phosphate guanylyltransferase; PFAM: nucleotidyl transferase; mannose-1-phosphate guanylyltransferase 1147676 9141957 Bmur_0976 Brachyspira murdochii DSM 12563 mannose-1-phosphate guanylyltransferase YP_003633271.1 1146606 D 526224 CDS YP_003633272.1 296126020 9141958 complement(1147683..1148522) 1 NC_014150.1 KEGG: bhy:BHWA1_02174 hypothetical protein; hypothetical protein 1148522 9141958 Bmur_0977 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633272.1 1147683 R 526224 CDS YP_003633273.1 296126021 9141959 complement(1148535..1149521) 1 NC_014150.1 KEGG: bhy:BHWA1_02173 hypothetical protein; hypothetical protein 1149521 9141959 Bmur_0978 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633273.1 1148535 R 526224 CDS YP_003633274.1 296126022 9141960 complement(1149580..1150449) 1 NC_014150.1 KEGG: bhy:BHWA1_02172 4-diphosphocytidyl-2- C-methyl-D-erythritol kinase; PFAM: GHMP kinase; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1150449 9141960 Bmur_0979 Brachyspira murdochii DSM 12563 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase YP_003633274.1 1149580 R 526224 CDS YP_003633275.1 296126023 9141961 complement(1150616..1150849) 1 NC_014150.1 PFAM: YcfA family protein; KEGG: tma:TM1312 hypothetical protein; hypothetical protein 1150849 9141961 Bmur_0980 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633275.1 1150616 R 526224 CDS YP_003633276.1 296126024 9141962 complement(1150846..1151067) 1 NC_014150.1 PFAM: protein of unknown function UPF0150; KEGG: trq:TRQ2_1511 hypothetical protein; hypothetical protein 1151067 9141962 Bmur_0981 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633276.1 1150846 R 526224 CDS YP_003633277.1 296126025 9141963 complement(1151188..1152777) 1 NC_014150.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: cjd:JJD26997_0008 hypothetical protein; hypothetical protein 1152777 9141963 Bmur_0982 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633277.1 1151188 R 526224 CDS YP_003633278.1 296126026 9141964 complement(1153129..1153545) 1 NC_014150.1 KEGG: bhy:BHWA1_02171 hypothetical protein; hypothetical protein 1153545 9141964 Bmur_0983 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633278.1 1153129 R 526224 CDS YP_003633279.1 296126027 9141965 complement(1153558..1154046) 1 NC_014150.1 KEGG: bhy:BHWA1_02170 hypothetical protein; hypothetical protein 1154046 9141965 Bmur_0984 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633279.1 1153558 R 526224 CDS YP_003633280.1 296126028 9141966 complement(1154043..1155230) 1 NC_014150.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: bhy:BHWA1_02169 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 1155230 9141966 Bmur_0985 Brachyspira murdochii DSM 12563 response regulator receiver modulated CheB methylesterase YP_003633280.1 1154043 R 526224 CDS YP_003633281.1 296126029 9141967 complement(1155240..1157522) 1 NC_014150.1 TIGRFAM: apolipoprotein N-acyltransferase; KEGG: bhy:BHWA1_02168 apolipoprotein N- acyltransferase; apolipoprotein N-acyltransferase 1157522 9141967 Bmur_0986 Brachyspira murdochii DSM 12563 apolipoprotein N-acyltransferase YP_003633281.1 1155240 R 526224 CDS YP_003633282.1 296126030 9141968 complement(1157618..1158073) 1 NC_014150.1 KEGG: bhy:BHWA1_02167 hemerythrin-related protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 1158073 9141968 Bmur_0987 Brachyspira murdochii DSM 12563 hemerythrin-like metal-binding protein YP_003633282.1 1157618 R 526224 CDS YP_003633283.1 296126031 9141969 complement(1158157..1159518) 1 NC_014150.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; Clp ATPase-like; KEGG: bhy:BHWA1_02166 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU 1159518 9141969 Bmur_0988 Brachyspira murdochii DSM 12563 heat shock protein HslVU, ATPase subunit HslU YP_003633283.1 1158157 R 526224 CDS YP_003633284.1 296126032 9141970 complement(1159522..1160052) 1 NC_014150.1 PFAM: 20S proteasome A and B subunits; KEGG: bhy:BHWA1_02165 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; 20S proteasome subunits A/B 1160052 9141970 Bmur_0989 Brachyspira murdochii DSM 12563 20S proteasome subunits A/B YP_003633284.1 1159522 R 526224 CDS YP_003633285.1 296126033 9141971 complement(1160224..1160682) 1 NC_014150.1 KEGG: lpc:LPC_2553 hypothetical protein; hypothetical protein 1160682 9141971 Bmur_0990 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633285.1 1160224 R 526224 CDS YP_003633286.1 296126034 9141972 complement(1160756..1161472) 1 NC_014150.1 PFAM: ABC transporter; KEGG: bhy:BHWA1_02359 ABC transporter integral membrane type-2 domain containing protein; ABC transporter 1161472 9141972 Bmur_0991 Brachyspira murdochii DSM 12563 ABC transporter YP_003633286.1 1160756 R 526224 CDS YP_003633287.1 296126035 9141973 complement(1161828..1162520) 1 NC_014150.1 KEGG: bhy:BHWA1_02358 ATP binding cassette (ABC) transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1162520 9141973 Bmur_0992 Brachyspira murdochii DSM 12563 ABC transporter YP_003633287.1 1161828 R 526224 CDS YP_003633288.1 296126036 9141974 complement(1162844..1163578) 1 NC_014150.1 KEGG: bhy:BHWA1_02357 hypothetical protein; hypothetical protein 1163578 9141974 Bmur_0993 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633288.1 1162844 R 526224 CDS YP_003633289.1 296126037 9141975 complement(1163591..1164256) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_02356 CAAX amino terminal protease; hypothetical protein 1164256 9141975 Bmur_0994 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633289.1 1163591 R 526224 CDS YP_003633290.1 296126038 9141976 complement(1164231..1165577) 1 NC_014150.1 PFAM: protein of unknown function DUF181; KEGG: bhy:BHWA1_02355 streptolysin associated protein SagD; hypothetical protein 1165577 9141976 Bmur_0995 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633290.1 1164231 R 526224 CDS YP_003633291.1 296126039 9141977 complement(1165630..1166721) 1 NC_014150.1 KEGG: bhy:BHWA1_02354 streptolysin associated protein SagC; streptolysin associated protein SagC 1166721 9141977 Bmur_0996 Brachyspira murdochii DSM 12563 streptolysin associated protein SagC YP_003633291.1 1165630 R 526224 CDS YP_003633292.1 296126040 9141978 complement(1166774..1167799) 1 NC_014150.1 KEGG: bhy:BHWA1_02353 streptolysin associated protein SagB; TIGRFAM: SagB-type dehydrogenase domain; PFAM: nitroreductase; SagB-type dehydrogenase domain-containing protein 1167799 9141978 Bmur_0997 Brachyspira murdochii DSM 12563 SagB-type dehydrogenase domain-containing protein YP_003633292.1 1166774 R 526224 CDS YP_003633293.1 296126041 9141979 1167963..1169510 1 NC_014150.1 PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: bhy:BHWA1_02376 UshA protein; 5'-nucleotidase/2',3'-cyclic phosphodiesterase- like esterase; 5'-nucleotidase 1169510 9141979 Bmur_0998 Brachyspira murdochii DSM 12563 5'-nucleotidase YP_003633293.1 1167963 D 526224 CDS YP_003633294.1 296126042 9141980 complement(1169574..1170002) 1 NC_014150.1 KEGG: bhy:BHWA1_02343 ankyrin repeat- containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 1170002 9141980 Bmur_0999 Brachyspira murdochii DSM 12563 ankyrin YP_003633294.1 1169574 R 526224 CDS YP_003633295.1 296126043 9141981 complement(1170125..1170907) 1 NC_014150.1 KEGG: bhy:BHWA1_02341 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; nucleotide pyrophosphohydrolase 1170907 9141981 Bmur_1000 Brachyspira murdochii DSM 12563 nucleotide pyrophosphohydrolase YP_003633295.1 1170125 R 526224 CDS YP_003633296.1 296126044 9141982 complement(1170926..1171435) 1 NC_014150.1 KEGG: bhy:BHWA1_02340 hypothetical protein; hypothetical protein 1171435 9141982 Bmur_1001 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633296.1 1170926 R 526224 CDS YP_003633297.1 296126045 9141983 complement(1171450..1171587) 1 NC_014150.1 KEGG: bhy:BHWA1_02339 hypothetical protein; hypothetical protein 1171587 9141983 Bmur_1002 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633297.1 1171450 R 526224 CDS YP_003633298.1 296126046 9141984 complement(1171728..1172435) 1 NC_014150.1 PFAM: flagellar filament outer layer protein FlaA; KEGG: bhy:BHWA1_02338 flagellar filament outer layer protein FlaA; flagellar filament outer layer protein FlaA 1172435 9141984 Bmur_1003 Brachyspira murdochii DSM 12563 flagellar filament outer layer protein FlaA YP_003633298.1 1171728 R 526224 CDS YP_003633299.1 296126047 9141985 complement(1172460..1173296) 1 NC_014150.1 PFAM: flagellar filament outer layer protein FlaA; KEGG: bhy:BHWA1_02337 flagellar filament outer layer protein FlaA; flagellar filament outer layer protein FlaA 1173296 9141985 Bmur_1004 Brachyspira murdochii DSM 12563 flagellar filament outer layer protein FlaA YP_003633299.1 1172460 R 526224 CDS YP_003633300.1 296126048 9141986 1173525..1174208 1 NC_014150.1 KEGG: bhy:BHWA1_02336 pseudouridylate synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1174208 9141986 Bmur_1005 Brachyspira murdochii DSM 12563 RNA-binding S4 domain-containing protein YP_003633300.1 1173525 D 526224 CDS YP_003633301.1 296126049 9141987 1174419..1176224 1 NC_014150.1 KEGG: bhy:BHWA1_01302 methyl-accepting chemotaxis- like domains (chemotaxis sensory transducer); PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 1176224 9141987 Bmur_1006 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003633301.1 1174419 D 526224 CDS YP_003633302.1 296126050 9141988 1176299..1176931 1 NC_014150.1 KEGG: bhy:BHWA1_02334 hypothetical protein; hypothetical protein 1176931 9141988 Bmur_1007 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633302.1 1176299 D 526224 CDS YP_003633303.1 296126051 9141989 1176959..1177573 1 NC_014150.1 KEGG: bhy:BHWA1_02333 hypothetical protein; hypothetical protein 1177573 9141989 Bmur_1008 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633303.1 1176959 D 526224 CDS YP_003633304.1 296126052 9141990 complement(1177619..1179364) 1 NC_014150.1 KEGG: bhy:BHWA1_02332 exoribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; exoribonuclease II 1179364 9141990 Bmur_1009 Brachyspira murdochii DSM 12563 exoribonuclease II YP_003633304.1 1177619 R 526224 CDS YP_003633305.1 296126053 9141991 1179623..1180732 1 NC_014150.1 TIGRFAM: chorismate synthase; KEGG: bhy:BHWA1_01410 chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1180732 9141991 Bmur_1010 Brachyspira murdochii DSM 12563 chorismate synthase YP_003633305.1 1179623 D 526224 CDS YP_003633306.1 296126054 9141992 complement(1181132..1181905) 1 NC_014150.1 PFAM: Protein of unknown function DUF2262; KEGG: bhy:BHWA1_01975 hypothetical membrane spanning protein; hypothetical protein 1181905 9141992 Bmur_1011 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633306.1 1181132 R 526224 CDS YP_003633307.1 296126055 9141993 complement(1182236..1183039) 1 NC_014150.1 PFAM: Protein of unknown function DUF2262; KEGG: bhy:BHWA1_01976 hypothetical protein; hypothetical protein 1183039 9141993 Bmur_1012 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633307.1 1182236 R 526224 CDS YP_003633308.1 296126056 9141994 complement(1183252..1186578) 1 NC_014150.1 KEGG: bhy:BHWA1_01977 hypothetical protein; hypothetical protein 1186578 9141994 Bmur_1013 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633308.1 1183252 R 526224 CDS YP_003633309.1 296126057 9141995 complement(1186878..1188221) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_01978 hypothetical protein; hypothetical protein 1188221 9141995 Bmur_1014 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633309.1 1186878 R 526224 CDS YP_003633310.1 296126058 9141997 1188900..1190225 1 NC_014150.1 KEGG: bhy:BHWA1_01419 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; fagellar hook-basal body protein 1190225 9141997 Bmur_1015 Brachyspira murdochii DSM 12563 fagellar hook-basal body protein YP_003633310.1 1188900 D 526224 CDS YP_003633311.1 296126059 9141998 1190289..1190513 1 NC_014150.1 PFAM: flagellar FlbD family protein; KEGG: bhy:BHWA1_01418 flagellar family protein; flagellar FlbD family protein 1190513 9141998 Bmur_1016 Brachyspira murdochii DSM 12563 flagellar FlbD family protein YP_003633311.1 1190289 D 526224 CDS YP_003633312.1 296126060 9141999 1190552..1191343 1 NC_014150.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bhy:BHWA1_01417 flagellar motor protein; MotA/TolQ/ExbB proton channel 1191343 9141999 Bmur_1017 Brachyspira murdochii DSM 12563 MotA/TolQ/ExbB proton channel YP_003633312.1 1190552 D 526224 CDS YP_003633313.1 296126061 9142000 1191360..1192160 1 NC_014150.1 PFAM: OmpA/MotB domain protein; KEGG: bhy:BHWA1_01416 flagellar motor protein; OmpA/MotB domain-containing protein 1192160 9142000 Bmur_1018 Brachyspira murdochii DSM 12563 OmpA/MotB domain-containing protein YP_003633313.1 1191360 D 526224 CDS YP_003633314.1 296126062 9142001 1192188..1193060 1 NC_014150.1 KEGG: bhy:BHWA1_01415 SAM-dependant methyltransferase; SAM-dependent methyltransferase 1193060 9142001 Bmur_1019 Brachyspira murdochii DSM 12563 SAM-dependent methyltransferase YP_003633314.1 1192188 D 526224 CDS YP_003633315.1 296126063 9142002 complement(1193115..1194860) 1 NC_014150.1 KEGG: bhy:BHWA1_01414 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoenolpyruvate-protein phosphotransferase 1194860 9142002 Bmur_1020 Brachyspira murdochii DSM 12563 phosphoenolpyruvate-protein phosphotransferase YP_003633315.1 1193115 R 526224 CDS YP_003633316.1 296126064 9142003 complement(1194880..1195146) 1 NC_014150.1 KEGG: bhy:BHWA1_01413 phosphocarrier protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 1195146 9142003 Bmur_1021 Brachyspira murdochii DSM 12563 phosphotransferase system, phosphocarrier protein HPr YP_003633316.1 1194880 R 526224 CDS YP_003633317.1 296126065 9142004 complement(1195873..1196646) 1 NC_014150.1 KEGG: bhy:BHWA1_01412 pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; Baf family transcriptional acitvator 1196646 9142004 Bmur_1022 Brachyspira murdochii DSM 12563 Baf family transcriptional acitvator YP_003633317.1 1195873 R 526224 CDS YP_003633318.1 296126066 9142005 complement(1196654..1198048) 1 NC_014150.1 KEGG: bhy:BHWA1_01411 polyA polymerase; TIGRFAM: metal dependent phophohydrolase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; polynucleotide adenylyltransferase 1198048 9142005 Bmur_1023 Brachyspira murdochii DSM 12563 polynucleotide adenylyltransferase YP_003633318.1 1196654 R 526224 CDS YP_003633319.1 296126067 9142006 complement(1198939..1199664) 1 NC_014150.1 KEGG: bhy:BHWA1_01899 hypothetical protein; hypothetical protein 1199664 9142006 Bmur_1024 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633319.1 1198939 R 526224 CDS YP_003633320.1 296126068 9142007 complement(1200519..1203671) 1 NC_014150.1 PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_01438 acriflavin resistance protein; acriflavin resistance protein 1203671 9142007 Bmur_1025 Brachyspira murdochii DSM 12563 acriflavin resistance protein YP_003633320.1 1200519 R 526224 CDS YP_003633321.1 296126069 9142008 complement(1203916..1207731) 1 NC_014150.1 KEGG: cbe:Cbei_0504 hypothetical protein; hypothetical protein 1207731 9142008 Bmur_1026 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633321.1 1203916 R 526224 CDS YP_003633322.1 296126070 9142009 complement(1207751..1208809) 1 NC_014150.1 KEGG: bhy:BHWA1_01439 hypothetical protein; hypothetical protein 1208809 9142009 Bmur_1027 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633322.1 1207751 R 526224 CDS YP_003633323.1 296126071 9142010 1208948..1209340 1 NC_014150.1 KEGG: bhy:BHWA1_01440 hypothetical protein; hypothetical protein 1209340 9142010 Bmur_1028 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633323.1 1208948 D 526224 CDS YP_003633324.1 296126072 9142011 1209429..1209875 1 NC_014150.1 KEGG: bhy:BHWA1_01441 hypothetical protein; hypothetical protein 1209875 9142011 Bmur_1029 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633324.1 1209429 D 526224 CDS YP_003633325.1 296126073 9142012 1209892..1210443 1 NC_014150.1 KEGG: bhy:BHWA1_01442 R polymerase sigma-70 factor 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1210443 9142012 Bmur_1030 Brachyspira murdochii DSM 12563 ECF subfamily RNA polymerase sigma-24 subunit YP_003633325.1 1209892 D 526224 CDS YP_003633326.1 296126074 9142013 1210440..1210913 1 NC_014150.1 KEGG: bhy:BHWA1_01443 hypothetical protein; hypothetical protein 1210913 9142013 Bmur_1031 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633326.1 1210440 D 526224 CDS YP_003633327.1 296126075 9142014 complement(1210919..1211482) 1 NC_014150.1 KEGG: bhy:BHWA1_01444 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 1211482 9142014 Bmur_1032 Brachyspira murdochii DSM 12563 phosphoribosylglycinamide formyltransferase YP_003633327.1 1210919 R 526224 CDS YP_003633328.1 296126076 9142015 complement(1211470..1212483) 1 NC_014150.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; KEGG: bhy:BHWA1_01445 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 1212483 9142015 Bmur_1033 Brachyspira murdochii DSM 12563 phosphoribosylformylglycinamidine cyclo-ligase YP_003633328.1 1211470 R 526224 CDS YP_003633329.1 296126077 9142016 complement(1212724..1215048) 1 NC_014150.1 KEGG: bhy:BHWA1_01446 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; translation initiation factor IF-2 1215048 9142016 Bmur_1034 Brachyspira murdochii DSM 12563 translation initiation factor IF-2 YP_003633329.1 1212724 R 526224 CDS YP_003633330.1 296126078 9142017 complement(1215077..1215823) 1 NC_014150.1 KEGG: bhy:BHWA1_01447 hypothetical protein; hypothetical protein 1215823 9142017 Bmur_1035 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633330.1 1215077 R 526224 CDS YP_003633331.1 296126079 9142018 complement(1215945..1217438) 1 NC_014150.1 KEGG: bhy:BHWA1_01448 hypothetical protein; hypothetical protein 1217438 9142018 Bmur_1036 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633331.1 1215945 R 526224 CDS YP_003633332.1 296126080 9142019 1217626..1218114 1 NC_014150.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bhy:BHWA1_01449 RNA methyltransferase; tRNA/rRNA methyltransferase SpoU 1218114 9142019 Bmur_1037 Brachyspira murdochii DSM 12563 tRNA/rRNA methyltransferase SpoU YP_003633332.1 1217626 D 526224 CDS YP_003633333.1 296126081 9142020 complement(1218247..1219524) 1 NC_014150.1 KEGG: cpe:CPE1368 hypothetical protein; hypothetical protein 1219524 9142020 Bmur_1038 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633333.1 1218247 R 526224 CDS YP_003633334.1 296126082 9142021 complement(1220210..1221046) 1 NC_014150.1 PFAM: flagellin domain protein; KEGG: bhy:BHWA1_01452 periplasmic flagellar filament protein FlaB3; flagellin domain-containing protein 1221046 9142021 Bmur_1039 Brachyspira murdochii DSM 12563 flagellin domain-containing protein YP_003633334.1 1220210 R 526224 CDS YP_003633335.1 296126083 9142022 1221340..1222302 1 NC_014150.1 PFAM: peptidase M28; KEGG: bhy:BHWA1_01453 leucine aminopeptidase; peptidase M28 1222302 9142022 Bmur_1040 Brachyspira murdochii DSM 12563 peptidase M28 YP_003633335.1 1221340 D 526224 CDS YP_003633336.1 296126084 9142023 complement(1222381..1222890) 1 NC_014150.1 KEGG: bhy:BHWA1_01493 hypothetical protein; hypothetical protein 1222890 9142023 Bmur_1041 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633336.1 1222381 R 526224 CDS YP_003633337.1 296126085 9142024 complement(1222989..1224335) 1 NC_014150.1 KEGG: bhy:BHWA1_01494 hypothetical protein; hypothetical protein 1224335 9142024 Bmur_1042 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633337.1 1222989 R 526224 CDS YP_003633338.1 296126086 9142026 1225562..1226656 1 NC_014150.1 KEGG: bhy:BHWA1_01497 hypothetical protein; hypothetical protein 1226656 9142026 Bmur_1043 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633338.1 1225562 D 526224 CDS YP_003633339.1 296126087 9142027 1226688..1228370 1 NC_014150.1 PFAM: protein of unknown function DUF115; KEGG: bhy:BHWA1_01498 hypothetical protein; hypothetical protein 1228370 9142027 Bmur_1044 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633339.1 1226688 D 526224 CDS YP_003633340.1 296126088 9142028 1228468..1229007 1 NC_014150.1 KEGG: bhy:BHWA1_01499 hypothetical protein; hypothetical protein 1229007 9142028 Bmur_1045 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633340.1 1228468 D 526224 CDS YP_003633341.1 296126089 9142029 1229091..1229411 1 NC_014150.1 KEGG: bhy:BHWA1_01525 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein 1229411 9142029 Bmur_1046 Brachyspira murdochii DSM 12563 Rhodanese domain-containing protein YP_003633341.1 1229091 D 526224 CDS YP_003633342.1 296126090 9142030 1229635..1230372 1 NC_014150.1 PFAM: peptidase M50; KEGG: bhy:BHWA1_01564 peptidase; peptidase M50 1230372 9142030 Bmur_1047 Brachyspira murdochii DSM 12563 peptidase M50 YP_003633342.1 1229635 D 526224 CDS YP_003633343.1 296126091 9142031 1231053..1232003 1 NC_014150.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: bhy:BHWA1_01492 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 1232003 9142031 Bmur_1048 Brachyspira murdochii DSM 12563 ornithine carbamoyltransferase YP_003633343.1 1231053 D 526224 CDS YP_003633344.1 296126092 9142032 1232082..1233305 1 NC_014150.1 TIGRFAM: argininosuccinate synthase; KEGG: bhy:BHWA1_01491 argininosuccinate lyase; PFAM: argininosuccinate synthase; argininosuccinate synthase 1233305 9142032 Bmur_1049 Brachyspira murdochii DSM 12563 argininosuccinate synthase YP_003633344.1 1232082 D 526224 CDS YP_003633345.1 296126093 9142033 1233309..1234700 1 NC_014150.1 KEGG: bhy:BHWA1_01490 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 1234700 9142033 Bmur_1050 Brachyspira murdochii DSM 12563 argininosuccinate lyase YP_003633345.1 1233309 D 526224 CDS YP_003633346.1 296126094 9142034 complement(1234770..1235261) 1 NC_014150.1 KEGG: bhy:BHWA1_01573 hypothetical protein; hypothetical protein 1235261 9142034 Bmur_1051 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633346.1 1234770 R 526224 CDS YP_003633347.1 296126095 9142035 complement(1235324..1235725) 1 NC_014150.1 KEGG: bhy:BHWA1_01572 hypothetical protein; hypothetical protein 1235725 9142035 Bmur_1052 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633347.1 1235324 R 526224 CDS YP_003633348.1 296126096 9142036 complement(1236442..1237830) 1 NC_014150.1 KEGG: bhy:BHWA1_01952 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1237830 9142036 Bmur_1053 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003633348.1 1236442 R 526224 CDS YP_003633349.1 296126097 9142037 complement(1238254..1238964) 1 NC_014150.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: bhy:BHWA1_01454 Zn dependant metalloprotease; peptidase membrane zinc metallopeptidase 1238964 9142037 Bmur_1054 Brachyspira murdochii DSM 12563 peptidase membrane zinc metallopeptidase YP_003633349.1 1238254 R 526224 CDS YP_003633350.1 296126098 9142038 1239578..1239997 1 NC_014150.1 KEGG: bhy:BHWA1_01899 hypothetical protein; hypothetical protein 1239997 9142038 Bmur_1055 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633350.1 1239578 D 526224 CDS YP_003633351.1 296126099 9142039 1240167..1240292 1 NC_014150.1 KEGG: fps:FP1515 hypothetical protein; hypothetical protein 1240292 9142039 Bmur_1056 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633351.1 1240167 D 526224 CDS YP_003633352.1 296126100 9142040 complement(1240400..1241830) 1 NC_014150.1 PFAM: Na+/solute symporter; KEGG: Na+/solute symporter; Na+/solute symporter 1241830 9142040 Bmur_1057 Brachyspira murdochii DSM 12563 Na+/solute symporter YP_003633352.1 1240400 R 526224 CDS YP_003633353.1 296126101 9142041 complement(1241973..1243334) 1 NC_014150.1 KEGG: bhy:BHWA1_01322 NorM, Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1243334 9142041 Bmur_1058 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003633353.1 1241973 R 526224 CDS YP_003633354.1 296126102 9142042 complement(1243883..1244617) 1 NC_014150.1 PFAM: protein of unknown function DUF1112; KEGG: bhy:BHWA1_01327 hypothetical protein; hypothetical protein 1244617 9142042 Bmur_1059 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633354.1 1243883 R 526224 CDS YP_003633355.1 296126103 9142043 complement(1244778..1245050) 1 NC_014150.1 KEGG: bhy:BHWA1_01328 hypothetical protein; hypothetical protein 1245050 9142043 Bmur_1060 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633355.1 1244778 R 526224 CDS YP_003633356.1 296126104 9142044 complement(1245192..1245422) 1 NC_014150.1 KEGG: bhy:BHWA1_01329 hypothetical protein; hypothetical protein 1245422 9142044 Bmur_1061 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633356.1 1245192 R 526224 CDS YP_003633357.1 296126105 9142047 1249373..1251880 1 NC_014150.1 KEGG: bhy:BHWA1_01331 hypothetical protein; hypothetical protein 1251880 9142047 Bmur_1062 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633357.1 1249373 D 526224 CDS YP_003633358.1 296126106 9142048 1252707..1253174 1 NC_014150.1 PFAM: CheC domain protein; KEGG: bhy:BHWA1_01332 chemotaxis protein CheX; chemotaxis protein CheC 1253174 9142048 Bmur_1063 Brachyspira murdochii DSM 12563 chemotaxis protein CheC YP_003633358.1 1252707 D 526224 CDS YP_003633359.1 296126107 9142050 1253633..1254448 1 NC_014150.1 PFAM: MCP methyltransferase CheR-type; KEGG: bhy:BHWA1_01334 chemotaxis protein methyltransferase CheR; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 1254448 9142050 Bmur_1065 Brachyspira murdochii DSM 12563 chemotaxis protein CheR YP_003633359.1 1253633 D 526224 CDS YP_003633360.1 296126108 9142051 1254460..1254867 1 NC_014150.1 PFAM: protein of unknown function DUF583; KEGG: bhy:BHWA1_01335 hypothetical protein; hypothetical protein 1254867 9142051 Bmur_1066 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633360.1 1254460 D 526224 CDS YP_003633361.1 296126109 9142052 1255032..1255826 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_01336 TPR domain-containing protein; hypothetical protein 1255826 9142052 Bmur_1067 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633361.1 1255032 D 526224 CDS YP_003633362.1 296126110 9142053 1255832..1256857 1 NC_014150.1 KEGG: bhy:BHWA1_01337 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 1256857 9142053 Bmur_1068 Brachyspira murdochii DSM 12563 MreB/Mrl family cell shape determining protein YP_003633362.1 1255832 D 526224 CDS YP_003633363.1 296126111 9142054 1256976..1257791 1 NC_014150.1 KEGG: bhy:BHWA1_01338 MreC, cell shape-determining protein; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 1257791 9142054 Bmur_1069 Brachyspira murdochii DSM 12563 rod shape-determining protein MreC YP_003633363.1 1256976 D 526224 CDS YP_003633364.1 296126112 9142055 1257791..1258333 1 NC_014150.1 KEGG: bhy:BHWA1_01339 rod shape- determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; rod shape-determining protein MreD 1258333 9142055 Bmur_1070 Brachyspira murdochii DSM 12563 rod shape-determining protein MreD YP_003633364.1 1257791 D 526224 CDS YP_003633365.1 296126113 9142056 1258339..1258887 1 NC_014150.1 PFAM: adenylate cyclase; KEGG: bhy:BHWA1_01340 CyaB, adenylate cyclase, class 2 (thermophilic); adenylate cyclase 1258887 9142056 Bmur_1071 Brachyspira murdochii DSM 12563 adenylate cyclase YP_003633365.1 1258339 D 526224 CDS YP_003633366.1 296126114 9142057 1259045..1260049 1 NC_014150.1 KEGG: bhy:BHWA1_01341 hypothetical protein; hypothetical protein 1260049 9142057 Bmur_1072 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633366.1 1259045 D 526224 CDS YP_003633367.1 296126115 9142058 1260079..1260672 1 NC_014150.1 KEGG: bhy:BHWA1_01342 hypothetical protein; hypothetical protein 1260672 9142058 Bmur_1073 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633367.1 1260079 D 526224 CDS YP_003633368.1 296126116 9142059 1260722..1261321 1 NC_014150.1 KEGG: bhy:BHWA1_01343 hypothetical protein; hypothetical protein 1261321 9142059 Bmur_1074 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633368.1 1260722 D 526224 CDS YP_003633369.1 296126117 9142060 1261418..1262107 1 NC_014150.1 KEGG: bhy:BHWA1_01344 hypothetical protein; hypothetical protein 1262107 9142060 Bmur_1075 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633369.1 1261418 D 526224 CDS YP_003633370.1 296126118 9142061 1262172..1264277 1 NC_014150.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: bhy:BHWA1_01345 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; ATP-dependent metalloprotease FtsH 1264277 9142061 Bmur_1076 Brachyspira murdochii DSM 12563 ATP-dependent metalloprotease FtsH YP_003633370.1 1262172 D 526224 CDS YP_003633371.1 296126119 9142062 complement(1264518..1265504) 1 NC_014150.1 PFAM: peptidase S58 DmpA; KEGG: bhy:BHWA1_01348 NylC-like family protein; peptidase S58 DmpA 1265504 9142062 Bmur_1077 Brachyspira murdochii DSM 12563 peptidase S58 DmpA YP_003633371.1 1264518 R 526224 CDS YP_003633372.1 296126120 9142063 1265925..1266035 1 NC_014150.1 hypothetical protein 1266035 9142063 Bmur_1078 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633372.1 1265925 D 526224 CDS YP_003633373.1 296126121 9142064 1266063..1267568 1 NC_014150.1 PFAM: Na+/solute symporter; KEGG: ppr:PBPRA0991 hypothetical protein; Na+/solute symporter 1267568 9142064 Bmur_1079 Brachyspira murdochii DSM 12563 Na+/solute symporter YP_003633373.1 1266063 D 526224 CDS YP_003633374.1 296126122 9142065 1268040..1269563 1 NC_014150.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: bhy:BHWA1_02089 predicted ATPase with chaperone activity; SMART: AAA ATPase; Mg chelatase subunit ChlI 1269563 9142065 Bmur_1080 Brachyspira murdochii DSM 12563 Mg chelatase subunit ChlI YP_003633374.1 1268040 D 526224 CDS YP_003633375.1 296126123 9142066 1269922..1271400 1 NC_014150.1 PFAM: AAA-4 family protein; KEGG: bhy:BHWA1_02086 hypothetical protein; transcriptional regulator 1271400 9142066 Bmur_1081 Brachyspira murdochii DSM 12563 transcriptional regulator YP_003633375.1 1269922 D 526224 CDS YP_003633376.1 296126124 9142067 1271487..1272419 1 NC_014150.1 TIGRFAM: thioredoxin reductase; KEGG: bhy:BHWA1_02087 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 1272419 9142067 Bmur_1082 Brachyspira murdochii DSM 12563 thioredoxin reductase YP_003633376.1 1271487 D 526224 CDS YP_003633377.1 296126125 9142068 complement(1272477..1273490) 1 NC_014150.1 PFAM: ATP:guanido phosphotransferase; KEGG: bhy:BHWA1_01575 guanido phosphotransferase; ATP:guanido phosphotransferase 1273490 9142068 Bmur_1083 Brachyspira murdochii DSM 12563 ATP:guanido phosphotransferase YP_003633377.1 1272477 R 526224 CDS YP_003633378.1 296126126 9142069 complement(1273480..1274028) 1 NC_014150.1 KEGG: bhy:BHWA1_01576 UvrB/UvrC protein; hypothetical protein 1274028 9142069 Bmur_1084 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633378.1 1273480 R 526224 CDS YP_003633379.1 296126127 9142070 complement(1274106..1274804) 1 NC_014150.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: bhy:BHWA1_01577 2-C-methyl-D- erythritol 4-phosphate cytidylyltransferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1274804 9142070 Bmur_1085 Brachyspira murdochii DSM 12563 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003633379.1 1274106 R 526224 CDS YP_003633380.1 296126128 9142071 complement(1274810..1276660) 1 NC_014150.1 KEGG: bhy:BHWA1_01578 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1276660 9142071 Bmur_1086 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003633380.1 1274810 R 526224 CDS YP_003633381.1 296126129 9142072 complement(1276882..1279269) 1 NC_014150.1 PFAM: glycosyl transferase 51; penicillin- binding protein transpeptidase; KEGG: bhy:BHWA1_01579 penicillin binding protein; glycosyl transferase 1279269 9142072 Bmur_1087 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633381.1 1276882 R 526224 CDS YP_003633382.1 296126130 9142073 1280616..1281860 1 NC_014150.1 PFAM: extracellular solute-binding protein family 1; KEGG: fma:FMG_0139 sugar ABC transporter substrate- binding protein; ABC transporter substrate-binding protein 1281860 9142073 Bmur_1088 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633382.1 1280616 D 526224 CDS YP_003633383.1 296126131 9142074 1282431..1283303 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fma:FMG_0140 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 1283303 9142074 Bmur_1089 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003633383.1 1282431 D 526224 CDS YP_003633384.1 296126132 9142075 1283356..1284210 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fma:FMG_0141 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 1284210 9142075 Bmur_1090 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003633384.1 1283356 D 526224 CDS YP_003633385.1 296126133 9142076 1284568..1285923 1 NC_014150.1 KEGG: bhy:BHWA1_02047 signal recognition particle GTPase; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; GTP-binding signal recognition particle SRP54 G- domain-containing protein 1285923 9142076 Bmur_1091 Brachyspira murdochii DSM 12563 GTP-binding signal recognition particle SRP54 G- domain-containing protein YP_003633385.1 1284568 D 526224 CDS YP_003633386.1 296126134 9142077 1285945..1286304 1 NC_014150.1 KEGG: bhy:BHWA1_02048 hypothetical protein; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; 30S ribosomal protein S16 1286304 9142077 Bmur_1092 Brachyspira murdochii DSM 12563 30S ribosomal protein S16 YP_003633386.1 1285945 D 526224 CDS YP_003633387.1 296126135 9142078 1286337..1286579 1 NC_014150.1 KEGG: bhy:BHWA1_02049 R-binding protein (contains KH domain); R-binding protein (contains KH domain) 1286579 9142078 Bmur_1093 Brachyspira murdochii DSM 12563 R-binding protein (contains KH domain) YP_003633387.1 1286337 D 526224 CDS YP_003633388.1 296126136 9142079 1286576..1287085 1 NC_014150.1 KEGG: bhy:BHWA1_02050 RimM protein, required for 16S processing; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain protein; RimM protein; 16S rRNA-processing protein RimM 1287085 9142079 Bmur_1094 Brachyspira murdochii DSM 12563 16S rRNA-processing protein RimM YP_003633388.1 1286576 D 526224 CDS YP_003633389.1 296126137 9142080 complement(1287110..1288120) 1 NC_014150.1 KEGG: bhy:BHWA1_02421 nicotinamide-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; cytidyltransferase 1288120 9142080 Bmur_1095 Brachyspira murdochii DSM 12563 cytidyltransferase YP_003633389.1 1287110 R 526224 CDS YP_003633390.1 296126138 9142081 complement(1288155..1288847) 1 NC_014150.1 KEGG: bhy:BHWA1_02422 nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 1288847 9142081 Bmur_1096 Brachyspira murdochii DSM 12563 nicotinamide mononucleotide transporter PnuC YP_003633390.1 1288155 R 526224 CDS YP_003633391.1 296126139 9142082 1289044..1289715 1 NC_014150.1 PFAM: protein of unknown function DUF305; KEGG: bhy:BHWA1_02051 hypothetical protein; hypothetical protein 1289715 9142082 Bmur_1097 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633391.1 1289044 D 526224 CDS YP_003633392.1 296126140 9142083 complement(1289855..1290940) 1 NC_014150.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_01618 alcohol dehydrogenase; molecular chaperone GroES 1290940 9142083 Bmur_1098 Brachyspira murdochii DSM 12563 molecular chaperone GroES YP_003633392.1 1289855 R 526224 CDS YP_003633393.1 296126141 9142084 complement(1291470..1291895) 1 NC_014150.1 PFAM: heat shock protein Hsp20; KEGG: bhy:BHWA1_02065 molecular chaperone, IbpA (small heat shock protein); heat shock protein Hsp20 1291895 9142084 Bmur_1099 Brachyspira murdochii DSM 12563 heat shock protein Hsp20 YP_003633393.1 1291470 R 526224 CDS YP_003633394.1 296126142 9142085 complement(1292371..1292793) 1 NC_014150.1 PFAM: heat shock protein Hsp20; KEGG: bhy:BHWA1_02064 heat shock protein HSP20; heat shock protein Hsp20 1292793 9142085 Bmur_1100 Brachyspira murdochii DSM 12563 heat shock protein Hsp20 YP_003633394.1 1292371 R 526224 CDS YP_003633395.1 296126143 9142086 complement(1293152..1294204) 1 NC_014150.1 KEGG: bhy:BHWA1_01640 hypothetical protein; hypothetical protein 1294204 9142086 Bmur_1101 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633395.1 1293152 R 526224 CDS YP_003633396.1 296126144 9142087 1294358..1295203 1 NC_014150.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bhy:BHWA1_01641 ATPase, associated with various cellular activities; ATPase AAA 1295203 9142087 Bmur_1102 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633396.1 1294358 D 526224 CDS YP_003633397.1 296126145 9142088 complement(1295355..1296176) 1 NC_014150.1 KEGG: bhy:BHWA1_02152 hypothetical protein; hypothetical protein 1296176 9142088 Bmur_1103 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633397.1 1295355 R 526224 CDS YP_003633398.1 296126146 9142089 complement(1296173..1297303) 1 NC_014150.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: bhy:BHWA1_02153 lipid A disaccharide synthase; LpxB; PFAM: glycosyl transferase 19; lipid-A-disaccharide synthase 1297303 9142089 Bmur_1104 Brachyspira murdochii DSM 12563 lipid-A-disaccharide synthase YP_003633398.1 1296173 R 526224 CDS YP_003633399.1 296126147 9142090 complement(1297331..1298125) 1 NC_014150.1 KEGG: bhy:BHWA1_02154 UDP-N-acetylglucosamine acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylglu cosamineO-acyltransferase; acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase 1298125 9142090 Bmur_1105 Brachyspira murdochii DSM 12563 acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase YP_003633399.1 1297331 R 526224 CDS YP_003633400.1 296126148 9142091 complement(1298141..1298605) 1 NC_014150.1 KEGG: bhy:BHWA1_02155 (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1298605 9142091 Bmur_1106 Brachyspira murdochii DSM 12563 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_003633400.1 1298141 R 526224 CDS YP_003633401.1 296126149 9142092 complement(1298758..1299948) 1 NC_014150.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_02161 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1299948 9142092 Bmur_1107 Brachyspira murdochii DSM 12563 iron-containing alcohol dehydrogenase YP_003633401.1 1298758 R 526224 CDS YP_003633402.1 296126150 9142093 complement(1300366..1301061) 1 NC_014150.1 KEGG: bhy:BHWA1_01538 jag protein; PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein 1301061 9142093 Bmur_1108 Brachyspira murdochii DSM 12563 single-stranded nucleic acid binding R3H domain-containing protein YP_003633402.1 1300366 R 526224 CDS YP_003633403.1 296126151 9142094 complement(1301127..1303007) 1 NC_014150.1 KEGG: bhy:BHWA1_01539 inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein; insertase 1303007 9142094 Bmur_1109 Brachyspira murdochii DSM 12563 insertase YP_003633403.1 1301127 R 526224 CDS YP_003633404.1 296126152 9142095 complement(1303098..1303307) 1 NC_014150.1 PFAM: protein of unknown function DUF37; KEGG: bhy:BHWA1_01540 hypothetical protein; hypothetical protein 1303307 9142095 Bmur_1110 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633404.1 1303098 R 526224 CDS YP_003633405.1 296126153 9142096 complement(1303718..1303861) 1 NC_014150.1 KEGG: tpp:TPASS_0951 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; 50S ribosomal protein L34 1303861 9142096 Bmur_1111 Brachyspira murdochii DSM 12563 50S ribosomal protein L34 YP_003633405.1 1303718 R 526224 CDS YP_003633406.1 296126154 9142097 1304058..1304540 1 NC_014150.1 KEGG: bhy:BHWA1_01542 response regulator; anti-sigma regulatory factor, serine/threonine protein kinase 1304540 9142097 Bmur_1112 Brachyspira murdochii DSM 12563 anti-sigma regulatory factor, serine/threonine protein kinase YP_003633406.1 1304058 D 526224 CDS YP_003633407.1 296126155 9142098 1304573..1306132 1 NC_014150.1 KEGG: bhy:BHWA1_01543 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; NUDIX hydrolase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase 1306132 9142098 Bmur_1113 Brachyspira murdochii DSM 12563 histidine kinase YP_003633407.1 1304573 D 526224 CDS YP_003633408.1 296126156 9142099 complement(1306270..1307202) 1 NC_014150.1 KEGG: bhy:BHWA1_01653 hypothetical protein; hypothetical protein 1307202 9142099 Bmur_1114 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633408.1 1306270 R 526224 CDS YP_003633409.1 296126157 9142100 complement(1307562..1307852) 1 NC_014150.1 KEGG: bhy:BHWA1_01481 hypothetical protein; hypothetical protein 1307852 9142100 Bmur_1115 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633409.1 1307562 R 526224 CDS YP_003633410.1 296126158 9142101 complement(1307852..1308637) 1 NC_014150.1 KEGG: bhy:BHWA1_01480 hypothetical protein; hypothetical protein 1308637 9142101 Bmur_1116 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633410.1 1307852 R 526224 CDS YP_003633411.1 296126159 9142102 complement(1308649..1309329) 1 NC_014150.1 PFAM: PBS lyase HEAT domain protein repeat- containing protein; HEAT domain containing protein; KEGG: bhy:BHWA1_01479 hypothetical protein; PBS lyase HEAT domain-containing protein repeat-containing protein 1309329 9142102 Bmur_1117 Brachyspira murdochii DSM 12563 PBS lyase HEAT domain-containing protein repeat-containing protein YP_003633411.1 1308649 R 526224 CDS YP_003633412.1 296126160 9142103 complement(1309320..1311893) 1 NC_014150.1 SMART: Threonyl/alanyl tRNA synthetase SAD; TIGRFAM: alanyl-tRNA synthetase; KEGG: bhy:BHWA1_01478 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; alanyl-tRNA synthetase 1311893 9142103 Bmur_1118 Brachyspira murdochii DSM 12563 alanyl-tRNA synthetase YP_003633412.1 1309320 R 526224 CDS YP_003633413.1 296126161 9142104 complement(1312099..1313610) 1 NC_014150.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bhy:BHWA1_01477 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1313610 9142104 Bmur_1119 Brachyspira murdochii DSM 12563 protease Do YP_003633413.1 1312099 R 526224 CDS YP_003633414.1 296126162 9142105 complement(1313841..1314773) 1 NC_014150.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: bhy:BHWA1_01476 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 1314773 9142105 Bmur_1120 Brachyspira murdochii DSM 12563 lipid A biosynthesis acyltransferase YP_003633414.1 1313841 R 526224 CDS YP_003633415.1 296126163 9142106 complement(1314777..1316765) 1 NC_014150.1 KEGG: bhy:BHWA1_01475 hypothetical protein; hypothetical protein 1316765 9142106 Bmur_1121 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633415.1 1314777 R 526224 CDS YP_003633416.1 296126164 9142107 complement(1316813..1317589) 1 NC_014150.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bhy:BHWA1_01474 short chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR 1317589 9142107 Bmur_1122 Brachyspira murdochii DSM 12563 short-chain dehydrogenase/reductase SDR YP_003633416.1 1316813 R 526224 CDS YP_003633417.1 296126165 9142108 complement(1317771..1318271) 1 NC_014150.1 PFAM: protein of unknown function DUF400; KEGG: bhy:BHWA1_01473 hypothetical protein; hypothetical protein 1318271 9142108 Bmur_1123 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633417.1 1317771 R 526224 CDS YP_003633418.1 296126166 9142109 complement(1318480..1318974) 1 NC_014150.1 PFAM: protein of unknown function DUF400; KEGG: bhy:BHWA1_01472 hypothetical protein; hypothetical protein 1318974 9142109 Bmur_1124 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633418.1 1318480 R 526224 CDS YP_003633419.1 296126167 9142110 1319127..1320602 1 NC_014150.1 KEGG: bhy:BHWA1_01471 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; leucyl aminopeptidase 1320602 9142110 Bmur_1125 Brachyspira murdochii DSM 12563 leucyl aminopeptidase YP_003633419.1 1319127 D 526224 CDS YP_003633420.1 296126168 9142111 complement(1320717..1321313) 1 NC_014150.1 KEGG: mma:MM_1673 galactoside-O-acetyltransferase; galactoside-O-acetyltransferase 1321313 9142111 Bmur_1126 Brachyspira murdochii DSM 12563 galactoside-O-acetyltransferase YP_003633420.1 1320717 R 526224 CDS YP_003633421.1 296126169 9142112 1321621..1321890 1 NC_014150.1 KEGG: bhy:BHWA1_01470 TRX Fd NuoE, TRX-like [2Fe- 2S] ferredoxin (Fd) family, DH:ubiquinone oxidoreductase (Nuo) subunit E subfamily; thioredoxin 1321890 9142112 Bmur_1127 Brachyspira murdochii DSM 12563 thioredoxin YP_003633421.1 1321621 D 526224 CDS YP_003633422.1 296126170 9142113 1321887..1323047 1 NC_014150.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: bhy:BHWA1_01469 DH dehydrogenase; respiratory-chain NADH dehydrogenase domain 51 kDa subunit 1323047 9142113 Bmur_1128 Brachyspira murdochii DSM 12563 respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_003633422.1 1321887 D 526224 CDS YP_003633423.1 296126171 9142114 1323072..1324439 1 NC_014150.1 KEGG: bhy:BHWA1_01468 ferrodoxin; ferrodoxin 1324439 9142114 Bmur_1129 Brachyspira murdochii DSM 12563 ferrodoxin YP_003633423.1 1323072 D 526224 CDS YP_003633424.1 296126172 9142115 1324519..1326069 1 NC_014150.1 PFAM: FAD dependent oxidoreductase; KEGG: bhy:BHWA1_01467 glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase 1326069 9142115 Bmur_1130 Brachyspira murdochii DSM 12563 FAD dependent oxidoreductase YP_003633424.1 1324519 D 526224 CDS YP_003633425.1 296126173 9142116 1326547..1327443 1 NC_014150.1 KEGG: bhy:BHWA1_00126 hypothetical protein; hypothetical protein 1327443 9142116 Bmur_1131 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633425.1 1326547 D 526224 CDS YP_003633426.1 296126174 9142117 complement(1327543..1328166) 1 NC_014150.1 KEGG: bhy:BHWA1_01466 HisH, glutamine amidotransferase; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1328166 9142117 Bmur_1132 Brachyspira murdochii DSM 12563 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_003633426.1 1327543 R 526224 CDS YP_003633427.1 296126175 9142118 complement(1328249..1328848) 1 NC_014150.1 KEGG: bhy:BHWA1_01465 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1328848 9142118 Bmur_1133 Brachyspira murdochii DSM 12563 imidazoleglycerol-phosphate dehydratase YP_003633427.1 1328249 R 526224 CDS YP_003633428.1 296126176 9142119 1328954..1329346 1 NC_014150.1 KEGG: bhy:BHWA1_01464 hypothetical protein; hypothetical protein 1329346 9142119 Bmur_1134 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633428.1 1328954 D 526224 CDS YP_003633429.1 296126177 9142120 complement(1329444..1330568) 1 NC_014150.1 TIGRFAM: glycerate kinase; KEGG: bhy:BHWA1_01463 glycerate kinase; PFAM: glycerate kinase; glycerate kinase 1330568 9142120 Bmur_1135 Brachyspira murdochii DSM 12563 glycerate kinase YP_003633429.1 1329444 R 526224 CDS YP_003633430.1 296126178 9142121 complement(1330614..1331777) 1 NC_014150.1 PFAM: sugar diacid recognition domain protein; KEGG: msu:MS0694 carbohydrate diacid transcriptional activator CdaR; CdaR family transcriptional regulator 1331777 9142121 Bmur_1136 Brachyspira murdochii DSM 12563 CdaR family transcriptional regulator YP_003633430.1 1330614 R 526224 CDS YP_003633431.1 296126179 9142122 1332050..1333390 1 NC_014150.1 PFAM: gluconate transporter; KEGG: pmo:Pmob_0535 gluconate transporter; gluconate transporter 1333390 9142122 Bmur_1137 Brachyspira murdochii DSM 12563 gluconate transporter YP_003633431.1 1332050 D 526224 CDS YP_003633432.1 296126180 9142123 1333406..1334236 1 NC_014150.1 KEGG: ckr:CKR_2525 hypothetical protein; hypothetical protein 1334236 9142123 Bmur_1138 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633432.1 1333406 D 526224 CDS YP_003633433.1 296126181 9142124 1334395..1335552 1 NC_014150.1 TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_00811 AbgB, metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1335552 9142124 Bmur_1139 Brachyspira murdochii DSM 12563 amidohydrolase YP_003633433.1 1334395 D 526224 CDS YP_003633434.1 296126182 9142125 complement(1335579..1337396) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_01628 TPR domain-containing protein; hypothetical protein 1337396 9142125 Bmur_1140 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633434.1 1335579 R 526224 CDS YP_003633435.1 296126183 9142126 1337854..1339305 1 NC_014150.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; KEGG: bhy:BHWA1_01682 glutamyl-tRNA(Gln) amidotransferase, B subunit; SMART: Asn/Gln amidotransferase; glutamyl-tRNA(Gln) amidotransferase subunit B 1339305 9142126 Bmur_1141 Brachyspira murdochii DSM 12563 glutamyl-tRNA(Gln) amidotransferase subunit B YP_003633435.1 1337854 D 526224 CDS YP_003633436.1 296126184 9142127 complement(1339408..1340694) 1 NC_014150.1 PFAM: amine oxidase; KEGG: ypb:YPTS_1046 O-antigen synthesis protein WbyH; amine oxidase 1340694 9142127 Bmur_1142 Brachyspira murdochii DSM 12563 amine oxidase YP_003633436.1 1339408 R 526224 CDS YP_003633437.1 296126185 9142128 complement(1340687..1341625) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: cyh:Cyan8802_2789 glycosyl transferase 2; glycosyl transferase 1341625 9142128 Bmur_1143 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633437.1 1340687 R 526224 CDS YP_003633438.1 296126186 9142129 complement(1341649..1342737) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: mar:MAE_10940 glycosyl transferase; glycosyl transferase 1342737 9142129 Bmur_1144 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633438.1 1341649 R 526224 CDS YP_003633439.1 296126187 9142130 complement(1342734..1343612) 1 NC_014150.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bhy:BHWA1_02680 NAD dependent epimerase/dehydratase superfamily protein; NAD-dependent epimerase/dehydratase 1343612 9142130 Bmur_1145 Brachyspira murdochii DSM 12563 NAD-dependent epimerase/dehydratase YP_003633439.1 1342734 R 526224 CDS YP_003633440.1 296126188 9142131 complement(1343623..1344156) 1 NC_014150.1 KEGG: bhy:BHWA1_02681 dTDP-4-dehydrorhamnose 3,5- epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1344156 9142131 Bmur_1146 Brachyspira murdochii DSM 12563 dTDP-4-dehydrorhamnose 3,5-epimerase YP_003633440.1 1343623 R 526224 CDS YP_003633441.1 296126189 9142132 complement(1344239..1345135) 1 NC_014150.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bhy:BHWA1_02680 NAD dependent epimerase/dehydratase superfamily protein; NAD-dependent epimerase/dehydratase 1345135 9142132 Bmur_1147 Brachyspira murdochii DSM 12563 NAD-dependent epimerase/dehydratase YP_003633441.1 1344239 R 526224 CDS YP_003633442.1 296126190 9142133 complement(1345288..1347015) 1 NC_014150.1 KEGG: bhy:BHWA1_01686 hypothetical protein; hypothetical protein 1347015 9142133 Bmur_1148 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633442.1 1345288 R 526224 CDS YP_003633443.1 296126191 9142135 complement(1348379..1349749) 1 NC_014150.1 KEGG: bhy:BHWA1_01969 phage terminase large subunit; TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; protein of unknown function DUF1545; phage terminase, large subunit, PBSX family 1349749 9142135 Bmur_1150 Brachyspira murdochii DSM 12563 phage terminase, large subunit, PBSX family YP_003633443.1 1348379 R 526224 CDS YP_003633444.1 296126192 9142136 1349886..1350260 1 NC_014150.1 KEGG: bhy:BHWA1_01991 hypothetical protein; hypothetical protein 1350260 9142136 Bmur_1151 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633444.1 1349886 D 526224 CDS YP_003633445.1 296126193 9142137 1350642..1352666 1 NC_014150.1 KEGG: bhy:BHWA1_01983 hypothetical protein; hypothetical protein 1352666 9142137 Bmur_1152 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633445.1 1350642 D 526224 CDS YP_003633446.1 296126194 9142138 1352733..1353518 1 NC_014150.1 KEGG: bhy:BHWA1_00028 hypothetical protein; hypothetical protein 1353518 9142138 Bmur_1153 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633446.1 1352733 D 526224 CDS YP_003633447.1 296126195 9142139 complement(1353604..1354104) 1 NC_014150.1 KEGG: ape:APE_0319 protease I; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; Pfpi family intracellular protease 1354104 9142139 Bmur_1154 Brachyspira murdochii DSM 12563 Pfpi family intracellular protease YP_003633447.1 1353604 R 526224 CDS YP_003633448.1 296126196 9142140 complement(1354186..1354656) 1 NC_014150.1 KEGG: bhy:BHWA1_01990 hypothetical protein; hypothetical protein 1354656 9142140 Bmur_1155 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633448.1 1354186 R 526224 CDS YP_003633449.1 296126197 9142141 1354733..1356877 1 NC_014150.1 KEGG: bhy:BHWA1_01979 hypothetical protein; hypothetical protein 1356877 9142141 Bmur_1156 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633449.1 1354733 D 526224 CDS YP_003633450.1 296126198 9142142 1357069..1357752 1 NC_014150.1 KEGG: bhy:BHWA1_01984 transcriptional regulator, MerR family; MerR family transcriptional regulator 1357752 9142142 Bmur_1157 Brachyspira murdochii DSM 12563 MerR family transcriptional regulator YP_003633450.1 1357069 D 526224 CDS YP_003633451.1 296126199 9142143 1357806..1357970 1 NC_014150.1 KEGG: vfm:VFMJ11_1559 hypothetical protein; hypothetical protein 1357970 9142143 Bmur_1158 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633451.1 1357806 D 526224 CDS YP_003633452.1 296126200 9142144 1358007..1358150 1 NC_014150.1 KEGG: vfm:VFMJ11_1559 hypothetical protein; hypothetical protein 1358150 9142144 Bmur_1159 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633452.1 1358007 D 526224 CDS YP_003633453.1 296126201 9142145 1358331..1358639 1 NC_014150.1 KEGG: bhy:BHWA1_01985 hypothetical protein; hypothetical protein 1358639 9142145 Bmur_1160 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633453.1 1358331 D 526224 CDS YP_003633454.1 296126202 9142146 1358760..1359077 1 NC_014150.1 KEGG: pme:NATL1_02361 hypothetical protein; hypothetical protein 1359077 9142146 Bmur_1161 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633454.1 1358760 D 526224 CDS YP_003633455.1 296126203 9142147 1359218..1359586 1 NC_014150.1 KEGG: bhy:BHWA1_01991 hypothetical protein; hypothetical protein 1359586 9142147 Bmur_1162 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633455.1 1359218 D 526224 CDS YP_003633456.1 296126204 9142148 1359669..1360250 1 NC_014150.1 PFAM: chromate transporter; KEGG: bhy:BHWA1_01706 chromate transport protein; chromate transporter 1360250 9142148 Bmur_1163 Brachyspira murdochii DSM 12563 chromate transporter YP_003633456.1 1359669 D 526224 CDS YP_003633457.1 296126205 9142149 1360265..1360843 1 NC_014150.1 PFAM: chromate transporter; KEGG: bhy:BHWA1_01707 chromate transport protein; chromate transporter 1360843 9142149 Bmur_1164 Brachyspira murdochii DSM 12563 chromate transporter YP_003633457.1 1360265 D 526224 CDS YP_003633458.1 296126206 9142150 complement(1360856..1361284) 1 NC_014150.1 KEGG: bhy:BHWA1_01796 hypothetical protein; hypothetical protein 1361284 9142150 Bmur_1165 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633458.1 1360856 R 526224 CDS YP_003633459.1 296126207 9142151 complement(1361302..1361925) 1 NC_014150.1 PFAM: regulatory protein RecX; KEGG: bhy:BHWA1_01873 recombination regulator RecX; regulatory protein RecX 1361925 9142151 Bmur_1166 Brachyspira murdochii DSM 12563 regulatory protein RecX YP_003633459.1 1361302 R 526224 CDS YP_003633460.1 296126208 9142152 complement(1361964..1362482) 1 NC_014150.1 KEGG: bhy:BHWA1_01874 hypothetical protein; hypothetical protein 1362482 9142152 Bmur_1167 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633460.1 1361964 R 526224 CDS YP_003633461.1 296126209 9142153 1363088..1364074 1 NC_014150.1 PFAM: peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase; KEGG: bhy:BHWA1_01184 predicted choloylglycine hydrolase; peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase 1364074 9142153 Bmur_1168 Brachyspira murdochii DSM 12563 peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase YP_003633461.1 1363088 D 526224 CDS YP_003633462.1 296126210 9142154 complement(1364087..1364548) 1 NC_014150.1 KEGG: bhy:BHWA1_02388 TPR domain-containing protein; hypothetical protein 1364548 9142154 Bmur_1169 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633462.1 1364087 R 526224 CDS YP_003633463.1 296126211 9142155 complement(1364632..1365057) 1 NC_014150.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_01764 hypothetical protein; hypothetical protein 1365057 9142155 Bmur_1170 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633463.1 1364632 R 526224 CDS YP_003633464.1 296126212 9142156 1365213..1365755 1 NC_014150.1 KEGG: bhy:BHWA1_01782 hypothetical protein; hypothetical protein 1365755 9142156 Bmur_1171 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633464.1 1365213 D 526224 CDS YP_003633465.1 296126213 9142157 1365752..1366174 1 NC_014150.1 KEGG: bhy:BHWA1_01781 hypothetical protein; hypothetical protein 1366174 9142157 Bmur_1172 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633465.1 1365752 D 526224 CDS YP_003633466.1 296126214 9142158 complement(1366171..1367052) 1 NC_014150.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: bhy:BHWA1_01780 ferritin CCC1 C, ferritin CCC1 like C; hypothetical protein 1367052 9142158 Bmur_1173 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633466.1 1366171 R 526224 CDS YP_003633467.1 296126215 9142159 complement(1367131..1367808) 1 NC_014150.1 KEGG: bhy:BHWA1_01797 HAD-super family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1367808 9142159 Bmur_1174 Brachyspira murdochii DSM 12563 HAD-superfamily hydrolase YP_003633467.1 1367131 R 526224 CDS YP_003633468.1 296126216 9142160 complement(1367973..1369535) 1 NC_014150.1 SMART: AAA ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; KEGG: bhy:BHWA1_01921 DNA polymerase III, gamma and tau subunits; PFAM: ATPase AAA; DNA polymerase III subunits gamma and tau 1369535 9142160 Bmur_1175 Brachyspira murdochii DSM 12563 DNA polymerase III subunits gamma and tau YP_003633468.1 1367973 R 526224 CDS YP_003633469.1 296126217 9142161 complement(1369617..1370210) 1 NC_014150.1 PFAM: protein of unknown function DUF1349; KEGG: cbk:CLL_A1994 hypothetical protein; hypothetical protein 1370210 9142161 Bmur_1176 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633469.1 1369617 R 526224 CDS YP_003633470.1 296126218 9142162 1370413..1370829 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1370829 9142162 Bmur_1177 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633470.1 1370413 D 526224 CDS YP_003633471.1 296126219 9142163 complement(1370963..1371907) 1 NC_014150.1 KEGG: bhy:BHWA1_01653 hypothetical protein; hypothetical protein 1371907 9142163 Bmur_1178 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633471.1 1370963 R 526224 CDS YP_003633472.1 296126220 9142164 complement(1372157..1373347) 1 NC_014150.1 KEGG: bhy:BHWA1_01664 hypothetical protein; hypothetical protein 1373347 9142164 Bmur_1179 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633472.1 1372157 R 526224 CDS YP_003633473.1 296126221 9142165 1373418..1374485 1 NC_014150.1 KEGG: bhy:BHWA1_01663 hypothetical protein; hypothetical protein 1374485 9142165 Bmur_1180 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633473.1 1373418 D 526224 CDS YP_003633474.1 296126222 9142166 1374509..1374832 1 NC_014150.1 KEGG: bhy:BHWA1_01662 hypothetical protein; hypothetical protein 1374832 9142166 Bmur_1181 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633474.1 1374509 D 526224 CDS YP_003633475.1 296126223 9142167 complement(1374940..1376784) 1 NC_014150.1 KEGG: bhy:BHWA1_01657 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1376784 9142167 Bmur_1182 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633475.1 1374940 R 526224 CDS YP_003633476.1 296126224 9142168 complement(1377260..1377652) 1 NC_014150.1 KEGG: bhy:BHWA1_01736 hypothetical protein; hypothetical protein 1377652 9142168 Bmur_1183 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633476.1 1377260 R 526224 CDS YP_003633477.1 296126225 9142169 1378237..1378707 1 NC_014150.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: bhy:BHWA1_02030 riboflavin synthase, beta subunit; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 1378707 9142169 Bmur_1184 Brachyspira murdochii DSM 12563 6,7-dimethyl-8-ribityllumazine synthase YP_003633477.1 1378237 D 526224 CDS YP_003633478.1 296126226 9142170 1378899..1379393 1 NC_014150.1 PFAM: Rubrerythrin; KEGG: bhy:BHWA1_02019 rubrerythrin; rubrerythrin 1379393 9142170 Bmur_1185 Brachyspira murdochii DSM 12563 rubrerythrin YP_003633478.1 1378899 D 526224 CDS YP_003633479.1 296126227 9142171 complement(1379671..1380168) 1 NC_014150.1 KEGG: bhy:BHWA1_01816 hypothetical hypothetical protein; hypothetical protein 1380168 9142171 Bmur_1186 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633479.1 1379671 R 526224 CDS YP_003633480.1 296126228 9142172 complement(1380210..1380746) 1 NC_014150.1 KEGG: bhy:BHWA1_01815 hypothetical protein; hypothetical protein 1380746 9142172 Bmur_1187 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633480.1 1380210 R 526224 CDS YP_003633481.1 296126229 9142173 complement(1380788..1380991) 1 NC_014150.1 KEGG: bhy:BHWA1_01814 hypothetical protein; hypothetical protein 1380991 9142173 Bmur_1188 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633481.1 1380788 R 526224 CDS YP_003633482.1 296126230 9142174 1381270..1381506 1 NC_014150.1 KEGG: bhy:BHWA1_01762 hypothetical protein; hypothetical protein 1381506 9142174 Bmur_1189 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633482.1 1381270 D 526224 CDS YP_003633483.1 296126231 9142175 complement(1381579..1382922) 1 NC_014150.1 PFAM: protein of unknown function DUF107; KEGG: bhy:BHWA1_01763 NfeD, membrane-bound serine protease (ClpP class); hypothetical protein 1382922 9142175 Bmur_1190 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633483.1 1381579 R 526224 CDS YP_003633484.1 296126232 9142176 complement(1383732..1384154) 1 NC_014150.1 KEGG: bhy:BHWA1_01482 C GCAxxG C C, redox- active protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 1384154 9142176 Bmur_1191 Brachyspira murdochii DSM 12563 C_GCAxxG_C_C family protein YP_003633484.1 1383732 R 526224 CDS YP_003633485.1 296126233 9142177 complement(1384200..1385174) 1 NC_014150.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: bhy:BHWA1_01483 3-oxoacyl-(acyl-carrier- protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; 3-oxoacyl-ACP synthase 1385174 9142177 Bmur_1192 Brachyspira murdochii DSM 12563 3-oxoacyl-ACP synthase YP_003633485.1 1384200 R 526224 CDS YP_003633486.1 296126234 9142178 complement(1385224..1385850) 1 NC_014150.1 KEGG: bhy:BHWA1_01484 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; hypothetical protein 1385850 9142178 Bmur_1193 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633486.1 1385224 R 526224 CDS YP_003633487.1 296126235 9142179 1386003..1387148 1 NC_014150.1 KEGG: bhy:BHWA1_01922 pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1387148 9142179 Bmur_1194 Brachyspira murdochii DSM 12563 RNA-binding S4 domain-containing protein YP_003633487.1 1386003 D 526224 CDS YP_003633488.1 296126236 9142180 complement(1387202..1387816) 1 NC_014150.1 KEGG: bhy:BHWA1_01923 leucine rich repeat protein; leucine rich repeat protein 1387816 9142180 Bmur_1195 Brachyspira murdochii DSM 12563 leucine rich repeat protein YP_003633488.1 1387202 R 526224 CDS YP_003633489.1 296126237 9142181 complement(1387910..1388833) 1 NC_014150.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bhy:BHWA1_01924 pseudouridylate synthase; SMART: RNA-binding S4 domain protein; pseudouridine synthase 1388833 9142181 Bmur_1196 Brachyspira murdochii DSM 12563 pseudouridine synthase YP_003633489.1 1387910 R 526224 CDS YP_003633490.1 296126238 9142182 complement(1388851..1389405) 1 NC_014150.1 KEGG: bhy:BHWA1_01925 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase 1389405 9142182 Bmur_1197 Brachyspira murdochii DSM 12563 lipoprotein signal peptidase YP_003633490.1 1388851 R 526224 CDS YP_003633491.1 296126239 9142183 1389661..1390668 1 NC_014150.1 KEGG: bhy:BHWA1_01926 ADP-heptose synthase; TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; rfaE bifunctional protein 1390668 9142183 Bmur_1198 Brachyspira murdochii DSM 12563 rfaE bifunctional protein YP_003633491.1 1389661 D 526224 CDS YP_003633492.1 296126240 9142184 1390707..1391840 1 NC_014150.1 KEGG: bhy:BHWA1_01927 hypothetical protein; hypothetical protein 1391840 9142184 Bmur_1199 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633492.1 1390707 D 526224 CDS YP_003633493.1 296126241 9142185 complement(1391994..1393388) 1 NC_014150.1 PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_01940 sodium dicarboxylate symporter family; sodium:dicarboxylate symporter 1393388 9142185 Bmur_1200 Brachyspira murdochii DSM 12563 sodium:dicarboxylate symporter YP_003633493.1 1391994 R 526224 CDS YP_003633494.1 296126242 9142186 complement(1393732..1394907) 1 NC_014150.1 PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_01833 Na+/H+ dicarboxylate symporte; sodium:dicarboxylate symporter 1394907 9142186 Bmur_1201 Brachyspira murdochii DSM 12563 sodium:dicarboxylate symporter YP_003633494.1 1393732 R 526224 CDS YP_003633495.1 296126243 9142187 complement(1395007..1396110) 1 NC_014150.1 PFAM: peptidase M23; KEGG: bhy:BHWA1_01724 peptidase; peptidase M23 1396110 9142187 Bmur_1202 Brachyspira murdochii DSM 12563 peptidase M23 YP_003633495.1 1395007 R 526224 CDS YP_003633496.1 296126244 9142188 complement(1396188..1397225) 1 NC_014150.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase RuvB domain; ATPase AAA; KEGG: bhy:BHWA1_01723 Holliday junction DNA helicase B; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 1397225 9142188 Bmur_1203 Brachyspira murdochii DSM 12563 Holliday junction DNA helicase RuvB YP_003633496.1 1396188 R 526224 CDS YP_003633497.1 296126245 9142189 complement(1397551..1398936) 1 NC_014150.1 KEGG: bhy:BHWA1_01739 multidrug efflux pump VmrA; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1398936 9142189 Bmur_1204 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003633497.1 1397551 R 526224 CDS YP_003633498.1 296126246 9142190 complement(1399755..1401416) 1 NC_014150.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bhy:BHWA1_01869 acyl-CoA synthetase; AMP-dependent synthetase/ligase 1401416 9142190 Bmur_1205 Brachyspira murdochii DSM 12563 AMP-dependent synthetase/ligase YP_003633498.1 1399755 R 526224 CDS YP_003633499.1 296126247 9142191 complement(1401456..1402127) 1 NC_014150.1 PFAM: Hly-III family protein; KEGG: bhy:BHWA1_01870 channel protein, hemolysin III family protein; Hly-III family protein 1402127 9142191 Bmur_1206 Brachyspira murdochii DSM 12563 Hly-III family protein YP_003633499.1 1401456 R 526224 CDS YP_003633500.1 296126248 9142192 1402761..1403612 1 NC_014150.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_01779 membrane protein, transporter; hypothetical protein 1403612 9142192 Bmur_1207 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633500.1 1402761 D 526224 CDS YP_003633501.1 296126249 9142193 1403817..1404785 1 NC_014150.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: bhy:BHWA1_01871 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1404785 9142193 Bmur_1208 Brachyspira murdochii DSM 12563 D-alanine--D-alanine ligase YP_003633501.1 1403817 D 526224 CDS YP_003633502.1 296126250 9142194 complement(1404803..1406419) 1 NC_014150.1 KEGG: bhy:BHWA1_01725 hypothetical protein; hypothetical protein 1406419 9142194 Bmur_1209 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633502.1 1404803 R 526224 CDS YP_003633503.1 296126251 9142195 complement(1406954..1407919) 1 NC_014150.1 SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: bhy:BHWA1_02007 D-arabinose-5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein 1407919 9142195 Bmur_1210 Brachyspira murdochii DSM 12563 KpsF/GutQ family protein YP_003633503.1 1406954 R 526224 CDS YP_003633504.1 296126252 9142196 complement(1407940..1408068) 1 NC_014150.1 KEGG: bhy:BHWA1_02006 hypothetical protein; hypothetical protein 1408068 9142196 Bmur_1211 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633504.1 1407940 R 526224 CDS YP_003633505.1 296126253 9142197 complement(1408078..1408443) 1 NC_014150.1 PFAM: protein of unknown function UPF0102; KEGG: bhy:BHWA1_02005 predicted endonuclease; hypothetical protein 1408443 9142197 Bmur_1212 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633505.1 1408078 R 526224 CDS YP_003633506.1 296126254 9142198 complement(1408453..1409688) 1 NC_014150.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bhy:BHWA1_02004 HD-GYP domain containing protein; metal dependent phosphohydrolase 1409688 9142198 Bmur_1213 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003633506.1 1408453 R 526224 CDS YP_003633507.1 296126255 9142199 complement(1409693..1409956) 1 NC_014150.1 PFAM: type III secretion exporter; KEGG: bhy:BHWA1_02003 flagellar biosynthesis protein FlhB; type III secretion exporter 1409956 9142199 Bmur_1214 Brachyspira murdochii DSM 12563 type III secretion exporter YP_003633507.1 1409693 R 526224 CDS YP_003633508.1 296126256 9142200 complement(1409946..1411028) 1 NC_014150.1 KEGG: bhy:BHWA1_02002 hypothetical protein; hypothetical protein 1411028 9142200 Bmur_1215 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633508.1 1409946 R 526224 CDS YP_003633509.1 296126257 9142201 complement(1411158..1412888) 1 NC_014150.1 TIGRFAM: adenine deaminase; KEGG: bhy:BHWA1_01698 adenine deaminase; PFAM: amidohydrolase; adenine deaminase 1412888 9142201 Bmur_1216 Brachyspira murdochii DSM 12563 adenine deaminase YP_003633509.1 1411158 R 526224 CDS YP_003633510.1 296126258 9142202 1413226..1413849 1 NC_014150.1 KEGG: bhy:BHWA1_01630 hypothetical protein; hypothetical protein 1413849 9142202 Bmur_1217 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633510.1 1413226 D 526224 CDS YP_003633511.1 296126259 9142203 1413936..1414190 1 NC_014150.1 PFAM: protein of unknown function DUF167; KEGG: bhy:BHWA1_01632 hypothetical protein; hypothetical protein 1414190 9142203 Bmur_1218 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633511.1 1413936 D 526224 CDS YP_003633512.1 296126260 9142204 1414308..1415174 1 NC_014150.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bhy:BHWA1_01598 RarD, predicted permease; hypothetical protein 1415174 9142204 Bmur_1219 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633512.1 1414308 D 526224 CDS YP_003633513.1 296126261 9142205 1415215..1416312 1 NC_014150.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bhy:BHWA1_01599 ATPase, associated with various cellular activities, AAA 5; ATPase AAA 1416312 9142205 Bmur_1220 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633513.1 1415215 D 526224 CDS YP_003633514.1 296126262 9142206 1416532..1417359 1 NC_014150.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01810 ferredoxin; 4Fe-4S ferredoxin 1417359 9142206 Bmur_1221 Brachyspira murdochii DSM 12563 4Fe-4S ferredoxin YP_003633514.1 1416532 D 526224 CDS YP_003633515.1 296126263 9142207 complement(1417559..1418212) 1 NC_014150.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: bhy:BHWA1_01809 formamidopyrimidine-D glycolase; DNA glycosylase/AP lyase 1418212 9142207 Bmur_1222 Brachyspira murdochii DSM 12563 DNA glycosylase/AP lyase YP_003633515.1 1417559 R 526224 CDS YP_003633516.1 296126264 9142208 complement(1418334..1419272) 1 NC_014150.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bhy:BHWA1_01744 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1419272 9142208 Bmur_1223 Brachyspira murdochii DSM 12563 NAD-dependent epimerase/dehydratase YP_003633516.1 1418334 R 526224 CDS YP_003633517.1 296126265 9142209 1419576..1420334 1 NC_014150.1 TIGRFAM: CRISPR-associated protein Cas6; KEGG: dae:Dtox_0913 CRISPR-associated protein Cas6; CRISPR-associated protein Cas6 1420334 9142209 Bmur_1224 Brachyspira murdochii DSM 12563 CRISPR-associated protein Cas6 YP_003633517.1 1419576 D 526224 CDS YP_003633518.1 296126266 9142210 1420351..1422111 1 NC_014150.1 PFAM: CRISPR-associated protein, CXXC-CXXC region; KEGG: lba:Lebu_0799 CRISPR-associated Cst1 family protein; CRISPR-associated protein 1422111 9142210 Bmur_1225 Brachyspira murdochii DSM 12563 CRISPR-associated protein YP_003633518.1 1420351 D 526224 CDS YP_003633519.1 296126267 9142211 1422135..1423028 1 NC_014150.1 TIGRFAM: CRISPR-associated regulatory protein, DevR family; CRISPR-associated autoregulator DevR family; KEGG: lmh:LMHCC_2119 crispr-associated regulatory protein, DevR family; DevR family CRISPR-associated autoregulator 1423028 9142211 Bmur_1226 Brachyspira murdochii DSM 12563 DevR family CRISPR-associated autoregulator YP_003633519.1 1422135 D 526224 CDS YP_003633520.1 296126268 9142212 1423021..1423761 1 NC_014150.1 KEGG: lba:Lebu_0797 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522; CRISPR-associated protein Cas5 1423761 9142212 Bmur_1227 Brachyspira murdochii DSM 12563 CRISPR-associated protein Cas5 YP_003633520.1 1423021 D 526224 CDS YP_003633521.1 296126269 9142213 1423758..1426052 1 NC_014150.1 TIGRFAM: CRISPR-associated helicase Cas3; CRISPR- associated HD domain protein; PFAM: DEAD/DEAH box helicase domain protein; KEGG: amt:Amet_2193 metal dependent phosphohydrolase; SMART: DEAD-like helicase; CRISPR-associated helicase Cas3 1426052 9142213 Bmur_1228 Brachyspira murdochii DSM 12563 CRISPR-associated helicase Cas3 YP_003633521.1 1423758 D 526224 CDS YP_003633522.1 296126270 9142214 1426060..1426563 1 NC_014150.1 KEGG: dae:Dtox_0918 CRISPR-associated protein Cas4; TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; CRISPR-associated protein Cas4 1426563 9142214 Bmur_1229 Brachyspira murdochii DSM 12563 CRISPR-associated protein Cas4 YP_003633522.1 1426060 D 526224 CDS YP_003633523.1 296126271 9142215 1426591..1427583 1 NC_014150.1 KEGG: fnu:FN1177 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated protein Cas1 1427583 9142215 Bmur_1230 Brachyspira murdochii DSM 12563 CRISPR-associated protein Cas1 YP_003633523.1 1426591 D 526224 CDS YP_003633524.1 296126272 9142216 1427590..1427874 1 NC_014150.1 KEGG: dae:Dtox_0920 CRISPR-associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; CRISPR-associated protein Cas2 1427874 9142216 Bmur_1231 Brachyspira murdochii DSM 12563 CRISPR-associated protein Cas2 YP_003633524.1 1427590 D 526224 CDS YP_003633525.1 296126273 9142217 1431608..1432795 1 NC_014150.1 KEGG: bhy:BHWA1_00239 cAMP-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 1432795 9142217 Bmur_1232 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003633525.1 1431608 D 526224 CDS YP_003633526.1 296126274 9142218 1432792..1433958 1 NC_014150.1 KEGG: bhy:BHWA1_00239 cAMP-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 1433958 9142218 Bmur_1233 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003633526.1 1432792 D 526224 CDS YP_003633527.1 296126275 9142219 1434290..1437064 1 NC_014150.1 KEGG: bhy:BHWA1_01831 trep; hypothetical protein 1437064 9142219 Bmur_1234 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633527.1 1434290 D 526224 CDS YP_003633528.1 296126276 9142220 1437383..1438507 1 NC_014150.1 PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_01601 variable surface protein - VspF; serpulina hyodysenteriae variable surface protein 1438507 9142220 Bmur_1235 Brachyspira murdochii DSM 12563 serpulina hyodysenteriae variable surface protein YP_003633528.1 1437383 D 526224 CDS YP_003633529.1 296126277 9142221 1438915..1439850 1 NC_014150.1 KEGG: bhy:BHWA1_01298 hypothetical protein; hypothetical protein 1439850 9142221 Bmur_1236 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633529.1 1438915 D 526224 CDS YP_003633530.1 296126278 9142222 complement(1439938..1440918) 1 NC_014150.1 PFAM: acetyl xylan esterase; KEGG: bhy:BHWA1_02085 acetyl xylan esterase, AXE1 family; acetyl xylan esterase 1440918 9142222 Bmur_1237 Brachyspira murdochii DSM 12563 acetyl xylan esterase YP_003633530.1 1439938 R 526224 CDS YP_003633531.1 296126279 9142223 1441471..1442670 1 NC_014150.1 PFAM: major facilitator superfamily MFS_1; KEGG: bhy:BHWA1_01606 hypothetical protein; major facilitator superfamily protein 1442670 9142223 Bmur_1238 Brachyspira murdochii DSM 12563 major facilitator superfamily protein YP_003633531.1 1441471 D 526224 CDS YP_003633532.1 296126280 9142224 1442708..1443898 1 NC_014150.1 PFAM: major facilitator superfamily MFS_1; KEGG: bhy:BHWA1_01606 hypothetical protein; major facilitator superfamily protein 1443898 9142224 Bmur_1239 Brachyspira murdochii DSM 12563 major facilitator superfamily protein YP_003633532.1 1442708 D 526224 CDS YP_003633533.1 296126281 9142225 complement(1443907..1445709) 1 NC_014150.1 KEGG: bhy:BHWA1_01955 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 1445709 9142225 Bmur_1240 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003633533.1 1443907 R 526224 CDS YP_003633534.1 296126282 9142226 complement(1445980..1446339) 1 NC_014150.1 PFAM: protein of unknown function DUF1667; KEGG: bhy:BHWA1_01956 hypothetical protein; hypothetical protein 1446339 9142226 Bmur_1241 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633534.1 1445980 R 526224 CDS YP_003633535.1 296126283 9142227 complement(1446386..1447252) 1 NC_014150.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bhy:BHWA1_01957 arginase; arginase 1447252 9142227 Bmur_1242 Brachyspira murdochii DSM 12563 arginase YP_003633535.1 1446386 R 526224 CDS YP_003633536.1 296126284 9142228 complement(1447279..1448553) 1 NC_014150.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bhy:BHWA1_01958 pyridine nucleotide- disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1448553 9142228 Bmur_1243 Brachyspira murdochii DSM 12563 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003633536.1 1447279 R 526224 CDS YP_003633537.1 296126285 9142229 complement(1448585..1450024) 1 NC_014150.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_01959 predicted dehydrogenase; FAD dependent oxidoreductase 1450024 9142229 Bmur_1244 Brachyspira murdochii DSM 12563 FAD dependent oxidoreductase YP_003633537.1 1448585 R 526224 CDS YP_003633538.1 296126286 9142230 complement(1450147..1451631) 1 NC_014150.1 KEGG: bhy:BHWA1_01960 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY-like; glycerol kinase 1451631 9142230 Bmur_1245 Brachyspira murdochii DSM 12563 glycerol kinase YP_003633538.1 1450147 R 526224 CDS YP_003633539.1 296126287 9142231 complement(1451723..1452463) 1 NC_014150.1 KEGG: bhy:BHWA1_01961 GlpF, glycerol uptake facilitator-like permease; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; MIP family channel protein 1452463 9142231 Bmur_1246 Brachyspira murdochii DSM 12563 MIP family channel protein YP_003633539.1 1451723 R 526224 CDS YP_003633540.1 296126288 9142232 complement(1452545..1453042) 1 NC_014150.1 KEGG: bhy:BHWA1_01962 rubrerythrin; PFAM: Rubrerythrin; SMART: zinc finger RanBP2-type; rubrerythrin 1453042 9142232 Bmur_1247 Brachyspira murdochii DSM 12563 rubrerythrin YP_003633540.1 1452545 R 526224 CDS YP_003633541.1 296126289 9142233 complement(1453397..1453714) 1 NC_014150.1 KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein 1453714 9142233 Bmur_1248 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633541.1 1453397 R 526224 CDS YP_003633542.1 296126290 9142234 complement(1453752..1454384) 1 NC_014150.1 KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein 1454384 9142234 Bmur_1249 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633542.1 1453752 R 526224 CDS YP_003633543.1 296126291 9142235 complement(1454384..1454941) 1 NC_014150.1 KEGG: bhy:BHWA1_02535 hypothetical protein; hypothetical protein 1454941 9142235 Bmur_1250 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633543.1 1454384 R 526224 CDS YP_003633544.1 296126292 9142236 complement(1454959..1456158) 1 NC_014150.1 PFAM: major facilitator superfamily MFS_1; KEGG: bhy:BHWA1_01963 arbinose efflux permease; major facilitator superfamily protein 1456158 9142236 Bmur_1251 Brachyspira murdochii DSM 12563 major facilitator superfamily protein YP_003633544.1 1454959 R 526224 CDS YP_003633545.1 296126293 9142237 complement(1456396..1456989) 1 NC_014150.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bhy:BHWA1_01965 arylesterase; G-D-S-L family lipolytic protein 1456989 9142237 Bmur_1252 Brachyspira murdochii DSM 12563 G-D-S-L family lipolytic protein YP_003633545.1 1456396 R 526224 CDS YP_003633546.1 296126294 9142239 complement(1457595..1458359) 1 NC_014150.1 PFAM: polypeptide-transport-associated domain protein FtsQ-type; KEGG: bhy:BHWA1_01588 cell division protein; cell division protein FtsQ 1458359 9142239 Bmur_1254 Brachyspira murdochii DSM 12563 cell division protein FtsQ YP_003633546.1 1457595 R 526224 CDS YP_003633547.1 296126295 9142240 complement(1458384..1460339) 1 NC_014150.1 KEGG: bhy:BHWA1_01589 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; methionyl-tRNA synthetase 1460339 9142240 Bmur_1255 Brachyspira murdochii DSM 12563 methionyl-tRNA synthetase YP_003633547.1 1458384 R 526224 CDS YP_003633548.1 296126296 9142241 1460691..1462529 1 NC_014150.1 KEGG: bhy:BHWA1_01590 methyl-accepting chemotaxis protein B; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 1462529 9142241 Bmur_1256 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003633548.1 1460691 D 526224 CDS YP_003633549.1 296126297 9142242 complement(1462632..1463516) 1 NC_014150.1 KEGG: bhy:BHWA1_01591 ElaC, metal-dependent hydrolases of the beta-lactamase superfamily; ElaC, metal-dependent hydrolase of the beta- lactamase superfamily 1463516 9142242 Bmur_1257 Brachyspira murdochii DSM 12563 ElaC, metal-dependent hydrolase of the beta- lactamase superfamily YP_003633549.1 1462632 R 526224 CDS YP_003633550.1 296126298 9142243 1463702..1464475 1 NC_014150.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: bhy:BHWA1_01592 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 1464475 9142243 Bmur_1258 Brachyspira murdochii DSM 12563 exodeoxyribonuclease III YP_003633550.1 1463702 D 526224 CDS YP_003633551.1 296126299 9142244 1464556..1464888 1 NC_014150.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bhy:BHWA1_01593 SpoIIAA, anti-anti-sigma regulatory factor; anti-sigma-factor antagonist 1464888 9142244 Bmur_1259 Brachyspira murdochii DSM 12563 anti-sigma-factor antagonist YP_003633551.1 1464556 D 526224 CDS YP_003633552.1 296126300 9142245 1464907..1465227 1 NC_014150.1 PFAM: protein of unknown function YGGT; KEGG: bhy:BHWA1_01594 protein of unknown function YGGT family; hypothetical protein 1465227 9142245 Bmur_1260 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633552.1 1464907 D 526224 CDS YP_003633553.1 296126301 9142246 1465230..1467359 1 NC_014150.1 KEGG: bhy:BHWA1_01595 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide repeat; hypothetical protein 1467359 9142246 Bmur_1261 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633553.1 1465230 D 526224 CDS YP_003633554.1 296126302 9142247 1467413..1467622 1 NC_014150.1 PFAM: Domain of unknown function DUF1858; KEGG: bhy:BHWA1_01596 hypothetical protein; hypothetical protein 1467622 9142247 Bmur_1262 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633554.1 1467413 D 526224 CDS YP_003633555.1 296126303 9142248 complement(1467755..1468501) 1 NC_014150.1 KEGG: bhy:BHWA1_01597 hypothetical protein; hypothetical protein 1468501 9142248 Bmur_1263 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633555.1 1467755 R 526224 CDS YP_003633556.1 296126304 9142249 complement(1468955..1469068) 1 NC_014150.1 KEGG: bhy:BHWA1_00015 hypothetical protein; hypothetical protein 1469068 9142249 Bmur_1264 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633556.1 1468955 R 526224 CDS YP_003633557.1 296126305 9142250 complement(1469298..1469561) 1 NC_014150.1 KEGG: bhy:BHWA1_02014 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 1469561 9142250 Bmur_1265 Brachyspira murdochii DSM 12563 30S ribosomal protein S20 YP_003633557.1 1469298 R 526224 CDS YP_003633558.1 296126306 9142253 complement(1470334..1471512) 1 NC_014150.1 KEGG: bhy:BHWA1_02011 short-chain alcohol dehydrogenase; PFAM: short-chain alcohol dehydrogenase; trans-2-enoyl-CoA reductase (NAD(+)) 1471512 9142253 Bmur_1267 Brachyspira murdochii DSM 12563 trans-2-enoyl-CoA reductase (NAD(+)) YP_003633558.1 1470334 R 526224 CDS YP_003633559.1 296126307 9142254 complement(1471620..1472729) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_01875 glycoslytransferase; glycosyl transferase 1472729 9142254 Bmur_1268 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633559.1 1471620 R 526224 CDS YP_003633560.1 296126308 9142255 complement(1472763..1473473) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1473473 9142255 Bmur_1269 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633560.1 1472763 R 526224 CDS YP_003633561.1 296126309 9142256 complement(1473531..1474478) 1 NC_014150.1 KEGG: bhy:BHWA1_01900 hypothetical protein; hypothetical protein 1474478 9142256 Bmur_1270 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633561.1 1473531 R 526224 CDS YP_003633562.1 296126310 9142257 complement(1474514..1475308) 1 NC_014150.1 PFAM: MgtC/SapB transporter; KEGG: bhy:BHWA1_01901 MgtC family protein; MgtC/SapB transporter 1475308 9142257 Bmur_1271 Brachyspira murdochii DSM 12563 MgtC/SapB transporter YP_003633562.1 1474514 R 526224 CDS YP_003633563.1 296126311 9142258 complement(1475333..1475755) 1 NC_014150.1 PFAM: PTS system fructose subfamily IIA component; KEGG: bhy:BHWA1_01902 PTS system, IIa component; PTS system fructose subfamily transporter subunit IIA 1475755 9142258 Bmur_1272 Brachyspira murdochii DSM 12563 PTS system fructose subfamily transporter subunit IIA YP_003633563.1 1475333 R 526224 CDS YP_003633564.1 296126312 9142259 1475944..1476396 1 NC_014150.1 KEGG: bhy:BHWA1_02025 dual specificity protein phosphatase; dual specificity protein phosphatase 1476396 9142259 Bmur_1273 Brachyspira murdochii DSM 12563 dual specificity protein phosphatase YP_003633564.1 1475944 D 526224 CDS YP_003633565.1 296126313 9142260 complement(1477027..1478139) 1 NC_014150.1 KEGG: bhy:BHWA1_01786 hypothetical protein; hypothetical protein 1478139 9142260 Bmur_1274 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633565.1 1477027 R 526224 CDS YP_003633566.1 296126314 9142261 complement(1478219..1478821) 1 NC_014150.1 KEGG: bhy:BHWA1_01787 OmpA family protein; OmpA family protein 1478821 9142261 Bmur_1275 Brachyspira murdochii DSM 12563 OmpA family protein YP_003633566.1 1478219 R 526224 CDS YP_003633567.1 296126315 9142262 complement(1478843..1479460) 1 NC_014150.1 KEGG: bhy:BHWA1_01788 outer membrane protein; hypothetical protein 1479460 9142262 Bmur_1276 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633567.1 1478843 R 526224 CDS YP_003633568.1 296126316 9142263 complement(1479699..1481417) 1 NC_014150.1 PFAM: methyltransferase type 11; KEGG: bhy:BHWA1_01789 2-polyprenyl-3-methyl-5- hydroxy-6-metoxy-1,4-benzoquinol methylase; methyltransferase type 11 1481417 9142263 Bmur_1277 Brachyspira murdochii DSM 12563 methyltransferase type 11 YP_003633568.1 1479699 R 526224 CDS YP_003633569.1 296126317 9142264 complement(1481811..1481951) 1 NC_014150.1 hypothetical protein 1481951 9142264 Bmur_1278 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633569.1 1481811 R 526224 CDS YP_003633570.1 296126318 9142265 complement(1482128..1482559) 1 NC_014150.1 KEGG: bhy:BHWA1_01185 hypothetical protein; hypothetical protein 1482559 9142265 Bmur_1279 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633570.1 1482128 R 526224 CDS YP_003633571.1 296126319 9142266 complement(1482853..1484136) 1 NC_014150.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: bhy:BHWA1_01817 adenylosuccinate synthase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase 1484136 9142266 Bmur_1280 Brachyspira murdochii DSM 12563 adenylosuccinate synthetase YP_003633571.1 1482853 R 526224 CDS YP_003633572.1 296126320 9142267 1484387..1486837 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_01820 TPR domain-containing protein; hypothetical protein 1486837 9142267 Bmur_1281 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633572.1 1484387 D 526224 CDS YP_003633573.1 296126321 9142268 1486905..1488170 1 NC_014150.1 KEGG: bhy:BHWA1_01821 AAA 5, ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA 1488170 9142268 Bmur_1282 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633573.1 1486905 D 526224 CDS YP_003633574.1 296126322 9142269 1488389..1489441 1 NC_014150.1 PFAM: 5-methylcytosine restriction system component- like protein; KEGG: bhy:BHWA1_01822 5-methylcytosine- specific restriction enzyme subunit Mcr; 5-methylcytosine restriction system component- like protein 1489441 9142269 Bmur_1283 Brachyspira murdochii DSM 12563 5-methylcytosine restriction system component- like protein YP_003633574.1 1488389 D 526224 CDS YP_003633575.1 296126323 9142270 complement(1489447..1492500) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_01828 hypothetical protein; hypothetical protein 1492500 9142270 Bmur_1284 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633575.1 1489447 R 526224 CDS YP_003633576.1 296126324 9142271 1492658..1493608 1 NC_014150.1 PFAM: cobalamin synthesis protein P47K; KEGG: bhy:BHWA1_01861 GTPase; cobalamin synthesis protein P47K 1493608 9142271 Bmur_1285 Brachyspira murdochii DSM 12563 cobalamin synthesis protein P47K YP_003633576.1 1492658 D 526224 CDS YP_003633577.1 296126325 9142272 complement(1493676..1494140) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1494140 9142272 Bmur_1286 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633577.1 1493676 R 526224 CDS YP_003633578.1 296126326 9142273 complement(1495514..1495687) 1 NC_014150.1 hypothetical protein 1495687 9142273 Bmur_1287 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633578.1 1495514 R 526224 CDS YP_003633579.1 296126327 9142274 complement(1495821..1496969) 1 NC_014150.1 PFAM: integrase; KEGG: mth:MTH893 integrase-recombinase; integrase 1496969 9142274 Bmur_1288 Brachyspira murdochii DSM 12563 integrase YP_003633579.1 1495821 R 526224 CDS YP_003633580.1 296126328 9142275 1497381..1497566 1 NC_014150.1 KEGG: amsh-lp; associated molecule with the SH3 domain of STAM (AMSH) like protein; K11867 AMSH-like protease; STAM (AMSH)-SH3 domain associated-like protein 1497566 9142275 Bmur_1289 Brachyspira murdochii DSM 12563 STAM (AMSH)-SH3 domain associated-like protein YP_003633580.1 1497381 D 526224 CDS YP_003633581.1 296126329 9142276 complement(1497667..1497891) 1 NC_014150.1 KEGG: ote:Oter_2697 hypothetical protein; hypothetical protein 1497891 9142276 Bmur_1290 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633581.1 1497667 R 526224 CDS YP_003633582.1 296126330 9142277 complement(1498041..1498250) 1 NC_014150.1 KEGG: crp:CRP_182 hypothetical protein; hypothetical protein 1498250 9142277 Bmur_1291 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633582.1 1498041 R 526224 CDS YP_003633583.1 296126331 9142278 complement(1498265..1500148) 1 NC_014150.1 KEGG: bhy:BHWA1_01851 Hvp 101 VSH-1 tail protein; hypothetical protein 1500148 9142278 Bmur_1292 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633583.1 1498265 R 526224 CDS YP_003633584.1 296126332 9142279 complement(1500230..1500769) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1500769 9142279 Bmur_1293 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633584.1 1500230 R 526224 CDS YP_003633585.1 296126333 9142280 complement(1500907..1501344) 1 NC_014150.1 KEGG: viral A-type inclusion protein; hypothetical protein 1501344 9142280 Bmur_1294 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633585.1 1500907 R 526224 CDS YP_003633586.1 296126334 9142281 complement(1501346..1501939) 1 NC_014150.1 PFAM: glycoside hydrolase 19; KEGG: bhy:BHWA1_01853 Lys - endolysin; glycoside hydrolase; glycoside hydrolase 19 1501939 9142281 Bmur_1295 Brachyspira murdochii DSM 12563 glycoside hydrolase 19 YP_003633586.1 1501346 R 526224 CDS YP_003633587.1 296126335 9142282 complement(1501943..1502287) 1 NC_014150.1 KEGG: pmx:PERMA_1019 zinc ribbon domain family; hypothetical protein 1502287 9142282 Bmur_1296 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633587.1 1501943 R 526224 CDS YP_003633588.1 296126336 9142283 complement(1502361..1502750) 1 NC_014150.1 PFAM: Sigma-70 region 4 type 2; KEGG: bhy:BHWA1_00983 hypothetical protein; response regulator receiver protein 1502750 9142283 Bmur_1297 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003633588.1 1502361 R 526224 CDS YP_003633589.1 296126337 9142285 complement(1502958..1504901) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1504901 9142285 Bmur_1299 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633589.1 1502958 R 526224 CDS YP_003633590.1 296126338 9142286 complement(1504914..1506032) 1 NC_014150.1 KEGG: mmi:MMAR_2102 PE-PGRS family protein; hypothetical protein 1506032 9142286 Bmur_1300 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633590.1 1504914 R 526224 CDS YP_003633591.1 296126339 9142287 complement(1506035..1506487) 1 NC_014150.1 KEGG: bhy:BHWA1_01147 hypothetical protein; hypothetical protein 1506487 9142287 Bmur_1301 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633591.1 1506035 R 526224 CDS YP_003633592.1 296126340 9142288 complement(1506487..1507383) 1 NC_014150.1 KEGG: mmy:MSC_0285 prolipoprotein; hypothetical protein 1507383 9142288 Bmur_1302 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633592.1 1506487 R 526224 CDS YP_003633593.1 296126341 9142289 complement(1507380..1510850) 1 NC_014150.1 KEGG: hau:Haur_1369 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 1510850 9142289 Bmur_1303 Brachyspira murdochii DSM 12563 phage tail tape measure protein, TP901 family YP_003633593.1 1507380 R 526224 CDS YP_003633594.1 296126342 9142290 complement(1510940..1511128) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1511128 9142290 Bmur_1304 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633594.1 1510940 R 526224 CDS YP_003633595.1 296126343 9142291 complement(1511194..1511541) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1511541 9142291 Bmur_1305 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633595.1 1511194 R 526224 CDS YP_003633596.1 296126344 9142292 complement(1511553..1512944) 1 NC_014150.1 KEGG: mac:MA3808 hypothetical protein; hypothetical protein 1512944 9142292 Bmur_1306 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633596.1 1511553 R 526224 CDS YP_003633597.1 296126345 9142293 complement(1513038..1513364) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1513364 9142293 Bmur_1307 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633597.1 1513038 R 526224 CDS YP_003633598.1 296126346 9142294 complement(1513376..1513834) 1 NC_014150.1 TIGRFAM: phage protein, HK97 gp10 family; KEGG: ATP-dependent RNA helicase; phage protein, HK97 gp10 family 1513834 9142294 Bmur_1308 Brachyspira murdochii DSM 12563 phage protein, HK97 gp10 family YP_003633598.1 1513376 R 526224 CDS YP_003633599.1 296126347 9142295 complement(1513836..1514189) 1 NC_014150.1 TIGRFAM: phage head-tail adaptor; KEGG: cby:CLM_3411 DNA polymerase I; phage head-tail adaptor 1514189 9142295 Bmur_1309 Brachyspira murdochii DSM 12563 phage head-tail adaptor YP_003633599.1 1513836 R 526224 CDS YP_003633600.1 296126348 9142296 complement(1514257..1514697) 1 NC_014150.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: rsp:RSP_6247 phage-related protein, DNA packing; DNA packaging phage protein 1514697 9142296 Bmur_1310 Brachyspira murdochii DSM 12563 DNA packaging phage protein YP_003633600.1 1514257 R 526224 CDS YP_003633601.1 296126349 9142297 complement(1514722..1516005) 1 NC_014150.1 KEGG: lga:LGAS_1485 phage phi-C31 GP36 major capsid- like protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; phage major capsid protein, HK97 family 1516005 9142297 Bmur_1311 Brachyspira murdochii DSM 12563 phage major capsid protein, HK97 family YP_003633601.1 1514722 R 526224 CDS YP_003633602.1 296126350 9142299 complement(1516675..1517952) 1 NC_014150.1 KEGG: det:DET1087 HK97 family portal protein , TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family 1517952 9142299 Bmur_1313 Brachyspira murdochii DSM 12563 phage portal protein, HK97 family YP_003633602.1 1516675 R 526224 CDS YP_003633603.1 296126351 9142300 1518082..1518480 1 NC_014150.1 KEGG: pmr:PMI0923 phage terminase, small subunit; phage terminase small subunit 1518480 9142300 Bmur_1314 Brachyspira murdochii DSM 12563 phage terminase small subunit YP_003633603.1 1518082 D 526224 CDS YP_003633604.1 296126352 9142301 1518489..1520261 1 NC_014150.1 PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase; terminase 1520261 9142301 Bmur_1315 Brachyspira murdochii DSM 12563 terminase YP_003633604.1 1518489 D 526224 CDS YP_003633605.1 296126353 9142302 1520771..1520977 1 NC_014150.1 PFAM: Protein of unknown function DUF1778; KEGG: nmu:Nmul_B2796 mobilization protein; hypothetical protein 1520977 9142302 Bmur_1316 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633605.1 1520771 D 526224 CDS YP_003633606.1 296126354 9142303 1521041..1522918 1 NC_014150.1 KEGG: spe:Spro_0109 hypothetical protein; hypothetical protein 1522918 9142303 Bmur_1317 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633606.1 1521041 D 526224 CDS YP_003633607.1 296126355 9142304 1523108..1524829 1 NC_014150.1 KEGG: bcm:Bcenmc03_7078 hypothetical protein; hypothetical protein 1524829 9142304 Bmur_1318 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633607.1 1523108 D 526224 CDS YP_003633608.1 296126356 9142305 complement(1525041..1525169) 1 NC_014150.1 KEGG: hut:Huta_2286 hypothetical protein; hypothetical protein 1525169 9142305 Bmur_1319 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633608.1 1525041 R 526224 CDS YP_003633609.1 296126357 9142306 complement(1525169..1526116) 1 NC_014150.1 PFAM: integrase domain protein SAM domain protein; integrase; KEGG: tme:Tmel_0169 phage integrase; integrase domain-containing protein SAM domain-containing protein 1526116 9142306 Bmur_1320 Brachyspira murdochii DSM 12563 integrase domain-containing protein SAM domain-containing protein YP_003633609.1 1525169 R 526224 CDS YP_003633610.1 296126358 9142307 complement(1526195..1526602) 1 NC_014150.1 KEGG: bhy:BHWA1_01032 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 1526602 9142307 Bmur_1321 Brachyspira murdochii DSM 12563 single-strand binding protein YP_003633610.1 1526195 R 526224 CDS YP_003633611.1 296126359 9142308 complement(1526777..1527127) 1 NC_014150.1 KEGG: bpy:Bphyt_7293 hypothetical protein; hypothetical protein 1527127 9142308 Bmur_1322 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633611.1 1526777 R 526224 CDS YP_003633612.1 296126360 9142309 complement(1527150..1527320) 1 NC_014150.1 KEGG: bwe:BcerKBAB4_0827 group-specific protein; group-specific protein 1527320 9142309 Bmur_1323 Brachyspira murdochii DSM 12563 group-specific protein YP_003633612.1 1527150 R 526224 CDS YP_003633613.1 296126361 9142310 complement(1527317..1527547) 1 NC_014150.1 KEGG: conserved hypothetical protein; K12840 splicing factor 45; hypothetical protein 1527547 9142310 Bmur_1324 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633613.1 1527317 R 526224 CDS YP_003633614.1 296126362 9142311 complement(1527551..1527751) 1 NC_014150.1 KEGG: predicted protein; hypothetical protein 1527751 9142311 Bmur_1325 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633614.1 1527551 R 526224 CDS YP_003633615.1 296126363 9142312 complement(1527755..1527949) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1527949 9142312 Bmur_1326 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633615.1 1527755 R 526224 CDS YP_003633616.1 296126364 9142313 complement(1527980..1528699) 1 NC_014150.1 KEGG: rme:Rmet_6243 hypothetical protein; hypothetical protein 1528699 9142313 Bmur_1327 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633616.1 1527980 R 526224 CDS YP_003633617.1 296126365 9142314 complement(1528696..1529085) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1529085 9142314 Bmur_1328 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633617.1 1528696 R 526224 CDS YP_003633618.1 296126366 9142315 complement(1529075..1529929) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1529929 9142315 Bmur_1329 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633618.1 1529075 R 526224 CDS YP_003633619.1 296126367 9142316 complement(1529926..1530153) 1 NC_014150.1 KEGG: ate:Athe_1169 chromosome segregation protein SMC; hypothetical protein 1530153 9142316 Bmur_1330 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633619.1 1529926 R 526224 CDS YP_003633620.1 296126368 9142317 complement(1530166..1530435) 1 NC_014150.1 KEGG: cth:Cthe_1731 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 1530435 9142317 Bmur_1331 Brachyspira murdochii DSM 12563 HNH endonuclease YP_003633620.1 1530166 R 526224 CDS YP_003633621.1 296126369 9142318 complement(1530498..1530788) 1 NC_014150.1 KEGG: cac:CAC1607 hypothetical protein; hypothetical protein 1530788 9142318 Bmur_1332 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633621.1 1530498 R 526224 CDS YP_003633622.1 296126370 9142319 complement(1530974..1531825) 1 NC_014150.1 SMART: AAA ATPase; KEGG: pml:ATP_00193 chromosomal replication initiator protein; ATPase AAA 1531825 9142319 Bmur_1333 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633622.1 1530974 R 526224 CDS YP_003633623.1 296126371 9142320 complement(1531791..1532690) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1532690 9142320 Bmur_1334 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633623.1 1531791 R 526224 CDS YP_003633624.1 296126372 9142321 complement(1533198..1533863) 1 NC_014150.1 KEGG: bhy:BHWA1_01726 flavin reductase like domain containing protein; PFAM: flavin reductase domain protein FMN-binding; Rubredoxin-type Fe(Cys)4 protein; SMART: flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein 1533863 9142321 Bmur_1335 Brachyspira murdochii DSM 12563 flavin reductase domain-containing FMN-binding protein YP_003633624.1 1533198 R 526224 CDS YP_003633625.1 296126373 9142322 complement(1534011..1535384) 1 NC_014150.1 KEGG: bhy:BHWA1_01727 AlsT, Na+/alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 1535384 9142322 Bmur_1336 Brachyspira murdochii DSM 12563 amino acid carrier protein YP_003633625.1 1534011 R 526224 CDS YP_003633626.1 296126374 9142323 complement(1535463..1536572) 1 NC_014150.1 TIGRFAM: alanine racemase; KEGG: bhy:BHWA1_01728 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 1536572 9142323 Bmur_1337 Brachyspira murdochii DSM 12563 alanine racemase YP_003633626.1 1535463 R 526224 CDS YP_003633627.1 296126375 9142324 complement(1536740..1539613) 1 NC_014150.1 KEGG: bhy:BHWA1_01729 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1539613 9142324 Bmur_1338 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633627.1 1536740 R 526224 CDS YP_003633628.1 296126376 9142325 complement(1539733..1540581) 1 NC_014150.1 KEGG: bhy:BHWA1_01731 flagellar basal body rod protein; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; fagellar hook-basal body protein 1540581 9142325 Bmur_1339 Brachyspira murdochii DSM 12563 fagellar hook-basal body protein YP_003633628.1 1539733 R 526224 CDS YP_003633629.1 296126377 9142326 complement(1540601..1541878) 1 NC_014150.1 KEGG: bhy:BHWA1_01732 UDP-N-acetylglucosamine 1- carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); UDP-N-acetylglucosamine1- carboxyvinyltransferase 1541878 9142326 Bmur_1340 Brachyspira murdochii DSM 12563 UDP-N-acetylglucosamine1- carboxyvinyltransferase YP_003633629.1 1540601 R 526224 CDS YP_003633630.1 296126378 9142327 complement(1542221..1544380) 1 NC_014150.1 KEGG: bhy:BHWA1_01602 single-stranded-D-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ 1544380 9142327 Bmur_1341 Brachyspira murdochii DSM 12563 single-stranded-DNA-specific exonuclease RecJ YP_003633630.1 1542221 R 526224 CDS YP_003633631.1 296126379 9142328 1544520..1545695 1 NC_014150.1 KEGG: bhy:BHWA1_01603 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 1545695 9142328 Bmur_1342 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633631.1 1544520 D 526224 CDS YP_003633632.1 296126380 9142329 1546016..1546195 1 NC_014150.1 KEGG: bhy:BHWA1_02015 hypothetical protein; hypothetical protein 1546195 9142329 Bmur_1343 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633632.1 1546016 D 526224 CDS YP_003633633.1 296126381 9142330 1546322..1546792 1 NC_014150.1 KEGG: bhy:BHWA1_02016 hypothetical protein; hypothetical protein 1546792 9142330 Bmur_1344 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633633.1 1546322 D 526224 CDS YP_003633634.1 296126382 9142331 complement(1546793..1547791) 1 NC_014150.1 KEGG: bhy:BHWA1_02017 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; hypothetical protein 1547791 9142331 Bmur_1345 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633634.1 1546793 R 526224 CDS YP_003633635.1 296126383 9142332 1547992..1549332 1 NC_014150.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bhy:BHWA1_02018 coenzyme A disulfide reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1549332 9142332 Bmur_1346 Brachyspira murdochii DSM 12563 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003633635.1 1547992 D 526224 CDS YP_003633636.1 296126384 9142333 1549948..1551162 1 NC_014150.1 KEGG: bhy:BHWA1_02034 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 1551162 9142333 Bmur_1347 Brachyspira murdochii DSM 12563 ankyrin YP_003633636.1 1549948 D 526224 CDS YP_003633637.1 296126385 9142334 1551606..1552643 1 NC_014150.1 KEGG: bhy:BHWA1_02033 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 1552643 9142334 Bmur_1348 Brachyspira murdochii DSM 12563 ankyrin YP_003633637.1 1551606 D 526224 CDS YP_003633638.1 296126386 9142335 complement(1553050..1553340) 1 NC_014150.1 PFAM: DNA polymerase beta domain protein region; KEGG: bhy:BHWA1_02032 nucleotidyltransferase; DNA polymerase beta domain-containing protein region 1553340 9142335 Bmur_1349 Brachyspira murdochii DSM 12563 DNA polymerase beta domain-containing protein region YP_003633638.1 1553050 R 526224 CDS YP_003633639.1 296126387 9142336 complement(1553354..1553773) 1 NC_014150.1 KEGG: bhy:BHWA1_02031 nucleotidyltransferase substrate binding protein; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: nucleotidyltransferase substrate binding protein HI0074; nucleotidyltransferase substrate binding protein 1553773 9142336 Bmur_1350 Brachyspira murdochii DSM 12563 nucleotidyltransferase substrate binding protein YP_003633639.1 1553354 R 526224 CDS YP_003633640.1 296126388 9142337 complement(1554554..1555909) 1 NC_014150.1 KEGG: bhy:BHWA1_02020 predicted phosphate starvation-inducible protein PhoH-like ATPase; PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; PhoH family protein 1555909 9142337 Bmur_1351 Brachyspira murdochii DSM 12563 PhoH family protein YP_003633640.1 1554554 R 526224 CDS YP_003633641.1 296126389 9142338 complement(1556003..1558186) 1 NC_014150.1 PFAM: protein of unknown function DUF262; KEGG: hhe:HH1029 hypothetical protein; hypothetical protein 1558186 9142338 Bmur_1352 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633641.1 1556003 R 526224 CDS YP_003633642.1 296126390 9142339 complement(1558206..1559939) 1 NC_014150.1 PFAM: protein of unknown function DUF262; KEGG: hhe:HH1030 hypothetical protein; hypothetical protein 1559939 9142339 Bmur_1353 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633642.1 1558206 R 526224 CDS YP_003633643.1 296126391 9142340 1560111..1560698 1 NC_014150.1 KEGG: bhy:BHWA1_02021 acetyltransferase (isoleucine patch superfamily); acetyltransferase 1560698 9142340 Bmur_1354 Brachyspira murdochii DSM 12563 acetyltransferase YP_003633643.1 1560111 D 526224 CDS YP_003633644.1 296126392 9142341 1560726..1561820 1 NC_014150.1 KEGG: bhy:BHWA1_02022 hydrolase of the alpha/beta superfamily; alpha/beta superfamily hydrolase 1561820 9142341 Bmur_1355 Brachyspira murdochii DSM 12563 alpha/beta superfamily hydrolase YP_003633644.1 1560726 D 526224 CDS YP_003633645.1 296126393 9142342 complement(1562002..1562433) 1 NC_014150.1 KEGG: slo:Shew_3661 hypothetical protein; hypothetical protein 1562433 9142342 Bmur_1356 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633645.1 1562002 R 526224 CDS YP_003633646.1 296126394 9142343 complement(1562435..1562635) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1562635 9142343 Bmur_1357 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633646.1 1562435 R 526224 CDS YP_003633647.1 296126395 9142344 complement(1562909..1563799) 1 NC_014150.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: bhy:BHWA1_02024 transcriptional regulator, LysR family; LysR family transcriptional regulator 1563799 9142344 Bmur_1358 Brachyspira murdochii DSM 12563 LysR family transcriptional regulator YP_003633647.1 1562909 R 526224 CDS YP_003633648.1 296126396 9142345 1563953..1564996 1 NC_014150.1 KEGG: dsa:Desal_3560 membrane protein; hypothetical protein 1564996 9142345 Bmur_1359 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633648.1 1563953 D 526224 CDS YP_003633649.1 296126397 9142346 complement(1565039..1566835) 1 NC_014150.1 KEGG: bhy:BHWA1_01642 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 1566835 9142346 Bmur_1360 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003633649.1 1565039 R 526224 CDS YP_003633650.1 296126398 9142348 1567288..1568421 1 NC_014150.1 KEGG: bhy:BHWA1_01718 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; von Willebrand factor A 1568421 9142348 Bmur_1361 Brachyspira murdochii DSM 12563 von Willebrand factor A YP_003633650.1 1567288 D 526224 CDS YP_003633651.1 296126399 9142349 1568448..1569578 1 NC_014150.1 KEGG: bhy:BHWA1_02529 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; hypothetical protein 1569578 9142349 Bmur_1362 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633651.1 1568448 D 526224 CDS YP_003633652.1 296126400 9142350 complement(1569796..1570680) 1 NC_014150.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bhy:BHWA1_01807 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 1570680 9142350 Bmur_1363 Brachyspira murdochii DSM 12563 fumarylacetoacetate (FAA) hydrolase YP_003633652.1 1569796 R 526224 CDS YP_003633653.1 296126401 9142351 1570955..1571542 1 NC_014150.1 PFAM: thymidine kinase; KEGG: bhy:BHWA1_01863 thymidine kinase; thymidine kinase 1571542 9142351 Bmur_1364 Brachyspira murdochii DSM 12563 thymidine kinase YP_003633653.1 1570955 D 526224 CDS YP_003633654.1 296126402 9142352 complement(1571629..1572516) 1 NC_014150.1 PFAM: Domain of unknown function DUF1858; protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; KEGG: bhy:BHWA1_01995 hypothetical protein; hypothetical protein 1572516 9142352 Bmur_1365 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633654.1 1571629 R 526224 CDS YP_003633655.1 296126403 9142353 1572713..1573894 1 NC_014150.1 KEGG: bhy:BHWA1_01994 N-acyl-D-glucosamine 2- epimerase; PFAM: N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase 1573894 9142353 Bmur_1366 Brachyspira murdochii DSM 12563 N-acylglucosamine 2-epimerase YP_003633655.1 1572713 D 526224 CDS YP_003633656.1 296126404 9142354 1574055..1575137 1 NC_014150.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: hpg:HPG27_1301 adenine specific DNA methyltransferase; DNA methylase N-4/N-6 domain-containing protein 1575137 9142354 Bmur_1367 Brachyspira murdochii DSM 12563 DNA methylase N-4/N-6 domain-containing protein YP_003633656.1 1574055 D 526224 CDS YP_003633657.1 296126405 9142355 1575130..1575936 1 NC_014150.1 KEGG: conserved hypothetical protein; type II site-specific deoxyribonuclease 1575936 9142355 Bmur_1368 Brachyspira murdochii DSM 12563 type II site-specific deoxyribonuclease YP_003633657.1 1575130 D 526224 CDS YP_003633658.1 296126406 9142356 1575988..1576788 1 NC_014150.1 KEGG: bhy:BHWA1_01992 hypothetical protein; hypothetical protein 1576788 9142356 Bmur_1369 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633658.1 1575988 D 526224 CDS YP_003633659.1 296126407 9142357 complement(1576952..1577104) 1 NC_014150.1 hypothetical protein 1577104 9142357 Bmur_1370 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633659.1 1576952 R 526224 CDS YP_003633660.1 296126408 9142358 complement(1577237..1577359) 1 NC_014150.1 KEGG: bhy:BHWA1_01899 hypothetical protein; hypothetical protein 1577359 9142358 Bmur_1371 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633660.1 1577237 R 526224 CDS YP_003633661.1 296126409 9142359 complement(1577383..1578972) 1 NC_014150.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: bhy:BHWA1_01783 arginyl-tRNA synthease; arginyl-tRNA synthetase 1578972 9142359 Bmur_1372 Brachyspira murdochii DSM 12563 arginyl-tRNA synthetase YP_003633661.1 1577383 R 526224 CDS YP_003633662.1 296126410 9142360 1579112..1579504 1 NC_014150.1 KEGG: bhy:BHWA1_01888 hypothetical protein; hypothetical protein 1579504 9142360 Bmur_1373 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633662.1 1579112 D 526224 CDS YP_003633663.1 296126411 9142361 1579545..1580030 1 NC_014150.1 KEGG: bhy:BHWA1_01887 phosphotransferase system mannitol/fructose-specific IIA domain protein; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 1580030 9142361 Bmur_1374 Brachyspira murdochii DSM 12563 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_003633663.1 1579545 D 526224 CDS YP_003633664.1 296126412 9142362 1580033..1580806 1 NC_014150.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: bhy:BHWA1_01886 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1580806 9142362 Bmur_1375 Brachyspira murdochii DSM 12563 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_003633664.1 1580033 D 526224 CDS YP_003633665.1 296126413 9142363 complement(1581216..1581680) 1 NC_014150.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bhy:BHWA1_01704 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase 1581680 9142363 Bmur_1376 Brachyspira murdochii DSM 12563 prolyl-tRNA synthetase YP_003633665.1 1581216 R 526224 CDS YP_003633666.1 296126414 9142364 complement(1581695..1581937) 1 NC_014150.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_01705 [2Fe-2S] binding domain protein; BFD domain-containing protein (2Fe-2S)-binding protein 1581937 9142364 Bmur_1377 Brachyspira murdochii DSM 12563 BFD domain-containing protein (2Fe-2S)-binding protein YP_003633666.1 1581695 R 526224 CDS YP_003633667.1 296126415 9142365 complement(1582140..1583198) 1 NC_014150.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bhy:BHWA1_01862 Tdh, threonine dehydrogenase- like Zn-dependent dehydrogenase; alcohol dehydrogenase 1583198 9142365 Bmur_1378 Brachyspira murdochii DSM 12563 alcohol dehydrogenase YP_003633667.1 1582140 R 526224 CDS YP_003633668.1 296126416 9142366 complement(1583282..1584178) 1 NC_014150.1 KEGG: bhy:BHWA1_01973 nicotinamidase; nicotinamidase 1584178 9142366 Bmur_1379 Brachyspira murdochii DSM 12563 nicotinamidase YP_003633668.1 1583282 R 526224 CDS YP_003633669.1 296126417 9142367 complement(1584432..1586579) 1 NC_014150.1 KEGG: bhy:BHWA1_01826 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1586579 9142367 Bmur_1380 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633669.1 1584432 R 526224 CDS YP_003633670.1 296126418 9142368 complement(1586788..1587948) 1 NC_014150.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_01827 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1587948 9142368 Bmur_1381 Brachyspira murdochii DSM 12563 iron-containing alcohol dehydrogenase YP_003633670.1 1586788 R 526224 CDS YP_003633671.1 296126419 9142369 complement(1588398..1588829) 1 NC_014150.1 KEGG: mta:Moth_0672 protein translocase subunit SecB; hypothetical protein 1588829 9142369 Bmur_1382 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633671.1 1588398 R 526224 CDS YP_003633672.1 296126420 9142370 complement(1588810..1589274) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1589274 9142370 Bmur_1383 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633672.1 1588810 R 526224 CDS YP_003633673.1 296126421 9142371 complement(1589300..1589716) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1589716 9142371 Bmur_1384 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633673.1 1589300 R 526224 CDS YP_003633674.1 296126422 9142372 complement(1589928..1591097) 1 NC_014150.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_01768 alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1591097 9142372 Bmur_1385 Brachyspira murdochii DSM 12563 iron-containing alcohol dehydrogenase YP_003633674.1 1589928 R 526224 CDS YP_003633675.1 296126423 9142373 complement(1591482..1592402) 1 NC_014150.1 KEGG: bhy:BHWA1_01774 hypothetical protein; hypothetical protein 1592402 9142373 Bmur_1386 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633675.1 1591482 R 526224 CDS YP_003633676.1 296126424 9142374 1593413..1594138 1 NC_014150.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bhy:BHWA1_01775 tetrapyrrole methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 1594138 9142374 Bmur_1387 Brachyspira murdochii DSM 12563 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003633676.1 1593413 D 526224 CDS YP_003633677.1 296126425 9142375 1594149..1594442 1 NC_014150.1 KEGG: bhy:BHWA1_01776 hypothetical protein; hypothetical protein 1594442 9142375 Bmur_1388 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633677.1 1594149 D 526224 CDS YP_003633678.1 296126426 9142376 complement(1594558..1595520) 1 NC_014150.1 KEGG: bhy:BHWA1_01777 DNA-binding response regulator, LuxR family protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 1595520 9142376 Bmur_1389 Brachyspira murdochii DSM 12563 LuxR family transcriptional regulator YP_003633678.1 1594558 R 526224 CDS YP_003633679.1 296126427 9142377 complement(1595517..1596290) 1 NC_014150.1 KEGG: bhy:BHWA1_01778 signal transduction histidine kinase; signal transduction histidine kinase 1596290 9142377 Bmur_1390 Brachyspira murdochii DSM 12563 signal transduction histidine kinase YP_003633679.1 1595517 R 526224 CDS YP_003633680.1 296126428 9142378 1597163..1597903 1 NC_014150.1 SMART: protein phosphatase 2C domain protein; KEGG: bhy:BHWA1_01700 serine/threonine protein phosphotase; Ser/Thr phosphatase 1597903 9142378 Bmur_1391 Brachyspira murdochii DSM 12563 Ser/Thr phosphatase YP_003633680.1 1597163 D 526224 CDS YP_003633681.1 296126429 9142379 1598107..1598595 1 NC_014150.1 KEGG: bhy:BHWA1_01699 hypothetical hypothetical protein; hypothetical protein 1598595 9142379 Bmur_1392 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633681.1 1598107 D 526224 CDS YP_003633682.1 296126430 9142380 1598659..1598892 1 NC_014150.1 KEGG: bhy:BHWA1_01897 hypothetical protein; hypothetical protein 1598892 9142380 Bmur_1393 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633682.1 1598659 D 526224 CDS YP_003633683.1 296126431 9142381 1598912..1599601 1 NC_014150.1 KEGG: bhy:BHWA1_01896 hypothetical protein; hypothetical protein 1599601 9142381 Bmur_1394 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633683.1 1598912 D 526224 CDS YP_003633684.1 296126432 9142382 1599996..1601102 1 NC_014150.1 KEGG: bhy:BHWA1_01895 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 1601102 9142382 Bmur_1395 Brachyspira murdochii DSM 12563 ankyrin YP_003633684.1 1599996 D 526224 CDS YP_003633685.1 296126433 9142383 complement(1601174..1601836) 1 NC_014150.1 KEGG: bhy:BHWA1_01894 redox-sensing transcriptional repressor REX; PFAM: CoA-binding domain protein; SMART: CoA-binding domain protein; CoA-binding protein 1601836 9142383 Bmur_1396 Brachyspira murdochii DSM 12563 CoA-binding protein YP_003633685.1 1601174 R 526224 CDS YP_003633686.1 296126434 9142384 1602222..1602335 1 NC_014150.1 KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; hypothetical protein 1602335 9142384 Bmur_1397 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633686.1 1602222 D 526224 CDS YP_003633687.1 296126435 9142385 1602453..1603184 1 NC_014150.1 PFAM: Silent information regulator protein Sir2; KEGG: bhy:BHWA1_01893 D-dependent deacetylase; silent information regulator protein Sir2 1603184 9142385 Bmur_1398 Brachyspira murdochii DSM 12563 silent information regulator protein Sir2 YP_003633687.1 1602453 D 526224 CDS YP_003633688.1 296126436 9142386 complement(1603367..1603840) 1 NC_014150.1 KEGG: bhy:BHWA1_01892 hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 1603840 9142386 Bmur_1399 Brachyspira murdochii DSM 12563 hemerythrin-like metal-binding protein YP_003633688.1 1603367 R 526224 CDS YP_003633689.1 296126437 9142387 complement(1603852..1604319) 1 NC_014150.1 KEGG: bhy:BHWA1_01891 hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 1604319 9142387 Bmur_1400 Brachyspira murdochii DSM 12563 hemerythrin-like metal-binding protein YP_003633689.1 1603852 R 526224 CDS YP_003633690.1 296126438 9142388 complement(1604338..1604778) 1 NC_014150.1 KEGG: bhy:BHWA1_01891 hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 1604778 9142388 Bmur_1401 Brachyspira murdochii DSM 12563 hemerythrin-like metal-binding protein YP_003633690.1 1604338 R 526224 CDS YP_003633691.1 296126439 9142389 complement(1605445..1606740) 1 NC_014150.1 TIGRFAM: enolase; KEGG: bhy:BHWA1_01890 phosphopyruvate hydratase; PFAM: Enolase-like; enolase 1606740 9142389 Bmur_1402 Brachyspira murdochii DSM 12563 enolase YP_003633691.1 1605445 R 526224 CDS YP_003633692.1 296126440 9142390 complement(1606994..1607740) 1 NC_014150.1 SMART: phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; KEGG: bhy:BHWA1_01885 phosphoglycerate mutase; PFAM: phosphoglycerate mutase; phosphoglycerate mutase 1607740 9142390 Bmur_1403 Brachyspira murdochii DSM 12563 phosphoglycerate mutase YP_003633692.1 1606994 R 526224 CDS YP_003633693.1 296126441 9142391 1607873..1609432 1 NC_014150.1 KEGG: bhy:BHWA1_01884 TPR domain-containing protein; hypothetical protein 1609432 9142391 Bmur_1404 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633693.1 1607873 D 526224 CDS YP_003633694.1 296126442 9142392 complement(1609844..1610296) 1 NC_014150.1 KEGG: bhy:BHWA1_01795 hypothetical protein; hypothetical protein 1610296 9142392 Bmur_1405 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633694.1 1609844 R 526224 CDS YP_003633695.1 296126443 9142393 1610415..1610855 1 NC_014150.1 KEGG: bhy:BHWA1_01889 hypothetical protein; hypothetical protein 1610855 9142393 Bmur_1406 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633695.1 1610415 D 526224 CDS YP_003633696.1 296126444 9142394 1610950..1611792 1 NC_014150.1 KEGG: bhy:BHWA1_01859 hypothetical protein; hypothetical protein 1611792 9142394 Bmur_1407 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633696.1 1610950 D 526224 CDS YP_003633697.1 296126445 9142395 1612066..1613718 1 NC_014150.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: bhy:BHWA1_01860 Na+/H+ antiporter; Na+/H+ antiporter NhaC 1613718 9142395 Bmur_1408 Brachyspira murdochii DSM 12563 Na+/H+ antiporter NhaC YP_003633697.1 1612066 D 526224 CDS YP_003633698.1 296126446 9142396 1614375..1615169 1 NC_014150.1 KEGG: bhy:BHWA1_01825 hypothetical protein; hypothetical protein 1615169 9142396 Bmur_1409 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633698.1 1614375 D 526224 CDS YP_003633699.1 296126447 9142397 1615169..1615447 1 NC_014150.1 KEGG: bhy:BHWA1_01824 hypothetical protein; hypothetical protein 1615447 9142397 Bmur_1410 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633699.1 1615169 D 526224 CDS YP_003633700.1 296126448 9142398 1615527..1616756 1 NC_014150.1 KEGG: bhy:BHWA1_01824 hypothetical protein; hypothetical protein 1616756 9142398 Bmur_1411 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633700.1 1615527 D 526224 CDS YP_003633701.1 296126449 9142399 1616815..1617696 1 NC_014150.1 KEGG: bhy:BHWA1_01850 Hvp 32 VSH-1 tail protein; Hvp 32 VSH-1 tail protein 1617696 9142399 Bmur_1412 Brachyspira murdochii DSM 12563 Hvp 32 VSH-1 tail protein YP_003633701.1 1616815 D 526224 CDS YP_003633702.1 296126450 9142400 1617852..1620014 1 NC_014150.1 KEGG: bhy:BHWA1_01851 Hvp 101 VSH-1 tail protein; Hvp 101 VSH-1 tail protein 1620014 9142400 Bmur_1413 Brachyspira murdochii DSM 12563 Hvp 101 VSH-1 tail protein YP_003633702.1 1617852 D 526224 CDS YP_003633703.1 296126451 9142401 1620024..1620638 1 NC_014150.1 PFAM: glycoside hydrolase 19; KEGG: bhy:BHWA1_01853 Lys - endolysin; glycoside hydrolase; glycoside hydrolase 19 1620638 9142401 Bmur_1414 Brachyspira murdochii DSM 12563 glycoside hydrolase 19 YP_003633703.1 1620024 D 526224 CDS YP_003633704.1 296126452 9142402 1620933..1621727 1 NC_014150.1 KEGG: bhy:BHWA1_01854 OrfF; hypothetical protein 1621727 9142402 Bmur_1415 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633704.1 1620933 D 526224 CDS YP_003633705.1 296126453 9142403 1621728..1621988 1 NC_014150.1 KEGG: bhy:BHWA1_01855 Hol; hypothetical protein 1621988 9142403 Bmur_1416 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633705.1 1621728 D 526224 CDS YP_003633706.1 296126454 9142404 1622006..1622353 1 NC_014150.1 KEGG: bhy:BHWA1_01856 OrfG; hypothetical protein 1622353 9142404 Bmur_1417 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633706.1 1622006 D 526224 CDS YP_003633707.1 296126455 9142405 1622340..1622549 1 NC_014150.1 KEGG: hya:HY04AAS1_0362 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1622549 9142405 Bmur_1418 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633707.1 1622340 D 526224 CDS YP_003633708.1 296126456 9142406 1622722..1624608 1 NC_014150.1 KEGG: bhy:BHWA1_01857 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1624608 9142406 Bmur_1419 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633708.1 1622722 D 526224 CDS YP_003633709.1 296126457 9142407 1624881..1626731 1 NC_014150.1 KEGG: bhy:BHWA1_01858 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1626731 9142407 Bmur_1420 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633709.1 1624881 D 526224 CDS YP_003633710.1 296126458 9142409 1627073..1628527 1 NC_014150.1 KEGG: bhy:BHWA1_01734 GTP-binding protein; TIGRFAM: ribosome-associated GTPase EngA; small GTP- binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA 1628527 9142409 Bmur_1422 Brachyspira murdochii DSM 12563 ribosome-associated GTPase EngA YP_003633710.1 1627073 D 526224 CDS YP_003633711.1 296126459 9142410 1628517..1629179 1 NC_014150.1 PFAM: protein of unknown function DUF205; KEGG: bhy:BHWA1_01735 predicted membrane protein; hypothetical protein 1629179 9142410 Bmur_1423 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633711.1 1628517 D 526224 CDS YP_003633712.1 296126460 9142411 1629315..1629731 1 NC_014150.1 KEGG: bhy:BHWA1_01832 hypothetical protein; hypothetical protein 1629731 9142411 Bmur_1424 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633712.1 1629315 D 526224 CDS YP_003633713.1 296126461 9142412 1630091..1631590 1 NC_014150.1 KEGG: ate:Athe_2404 hypothetical protein; hypothetical protein 1631590 9142412 Bmur_1425 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633713.1 1630091 D 526224 CDS YP_003633714.1 296126462 9142413 1631732..1632973 1 NC_014150.1 KEGG: bhy:BHWA1_01838 Hvp 45 VSH-1 capsid protein; Hvp 45 VSH-1 capsid protein 1632973 9142413 Bmur_1426 Brachyspira murdochii DSM 12563 Hvp 45 VSH-1 capsid protein YP_003633714.1 1631732 D 526224 CDS YP_003633715.1 296126463 9142414 1633179..1633421 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1633421 9142414 Bmur_1427 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633715.1 1633179 D 526224 CDS YP_003633716.1 296126464 9142415 1633427..1633816 1 NC_014150.1 PFAM: protein of unknown function DUF955; KEGG: saf:SULAZ_1045 hypothetical protein; hypothetical protein 1633816 9142415 Bmur_1428 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633716.1 1633427 D 526224 CDS YP_003633717.1 296126465 9142417 1635667..1636035 1 NC_014150.1 KEGG: bhy:BHWA1_01840 Hvp 13 VSH-1 associated protein 2; Hvp 13 VSH-1 associated protein 2 1636035 9142417 Bmur_1430 Brachyspira murdochii DSM 12563 Hvp 13 VSH-1 associated protein 2 YP_003633717.1 1635667 D 526224 CDS YP_003633718.1 296126466 9142418 1636304..1637347 1 NC_014150.1 KEGG: bhy:BHWA1_01841 Hvp 38 VSH-1 associated protein 3; Hvp 38 VSH-1 associated protein 3 1637347 9142418 Bmur_1431 Brachyspira murdochii DSM 12563 Hvp 38 VSH-1 associated protein 3 YP_003633718.1 1636304 D 526224 CDS YP_003633719.1 296126467 9142419 1638010..1638306 1 NC_014150.1 KEGG: bhy:BHWA1_01842 hypothetical protein; hypothetical protein 1638306 9142419 Bmur_1432 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633719.1 1638010 D 526224 CDS YP_003633720.1 296126468 9142420 1638370..1638753 1 NC_014150.1 KEGG: bhy:BHWA1_01843 OrfB; hypothetical protein 1638753 9142420 Bmur_1433 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633720.1 1638370 D 526224 CDS YP_003633721.1 296126469 9142421 1638784..1639341 1 NC_014150.1 KEGG: bhy:BHWA1_01844 Hvp 24 VSH-1 capsid protein; Hvp 24 VSH-1 capsid protein 1639341 9142421 Bmur_1434 Brachyspira murdochii DSM 12563 Hvp 24 VSH-1 capsid protein YP_003633721.1 1638784 D 526224 CDS YP_003633722.1 296126470 9142422 1639325..1639597 1 NC_014150.1 KEGG: bhy:BHWA1_01845 hypothetical protein; hypothetical protein 1639597 9142422 Bmur_1435 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633722.1 1639325 D 526224 CDS YP_003633723.1 296126471 9142423 1639805..1641202 1 NC_014150.1 KEGG: bhy:BHWA1_01846 Hvp 53 VSH-1 major tail protein; Hvp 53 VSH-1 major tail protein 1641202 9142423 Bmur_1436 Brachyspira murdochii DSM 12563 Hvp 53 VSH-1 major tail protein YP_003633723.1 1639805 D 526224 CDS YP_003633724.1 296126472 9142424 complement(1641209..1641526) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1641526 9142424 Bmur_1437 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633724.1 1641209 R 526224 CDS YP_003633725.1 296126473 9142425 1641869..1642225 1 NC_014150.1 OrfE; KEGG: bhy:BHWA1_01848 OrfE; hypothetical protein 1642225 9142425 Bmur_1438 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633725.1 1641869 D 526224 CDS YP_003633726.1 296126474 9142426 1642234..1642527 1 NC_014150.1 KEGG: bhy:BHWA1_01849 hypothetical protein; hypothetical protein 1642527 9142426 Bmur_1439 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633726.1 1642234 D 526224 CDS YP_003633727.1 296126475 9142427 1642583..1642897 1 NC_014150.1 KEGG: similar to rCG32007; hypothetical protein 1642897 9142427 Bmur_1440 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633727.1 1642583 D 526224 CDS YP_003633728.1 296126476 9142428 1642974..1644122 1 NC_014150.1 KEGG: bhy:BHWA1_01823 hypothetical protein; hypothetical protein 1644122 9142428 Bmur_1441 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633728.1 1642974 D 526224 CDS YP_003633729.1 296126477 9142429 1644413..1644964 1 NC_014150.1 KEGG: bhy:BHWA1_01745 hypothetical protein; hypothetical protein 1644964 9142429 Bmur_1442 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633729.1 1644413 D 526224 CDS YP_003633730.1 296126478 9142430 1644988..1645530 1 NC_014150.1 KEGG: bhy:BHWA1_01745 hypothetical protein; hypothetical protein 1645530 9142430 Bmur_1443 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633730.1 1644988 D 526224 CDS YP_003633731.1 296126479 9142431 complement(1645608..1646444) 1 NC_014150.1 KEGG: bhy:BHWA1_01765 methylenetetrahydrofolate dehydrogenase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase 1646444 9142431 Bmur_1444 Brachyspira murdochii DSM 12563 methylenetetrahydrofolate dehydrogenase YP_003633731.1 1645608 R 526224 CDS YP_003633732.1 296126480 9142432 1646538..1647734 1 NC_014150.1 KEGG: bhy:BHWA1_01766 hypothetical protein; hypothetical protein 1647734 9142432 Bmur_1445 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633732.1 1646538 D 526224 CDS YP_003633733.1 296126481 9142433 1647807..1649219 1 NC_014150.1 KEGG: bhy:BHWA1_01767 sodium:alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 1649219 9142433 Bmur_1446 Brachyspira murdochii DSM 12563 amino acid carrier protein YP_003633733.1 1647807 D 526224 CDS YP_003633734.1 296126482 9142435 complement(1649502..1649819) 1 NC_014150.1 KEGG: bhy:BHWA1_01812 hypothetical protein; hypothetical protein 1649819 9142435 Bmur_1447 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633734.1 1649502 R 526224 CDS YP_003633735.1 296126483 9142436 complement(1650239..1651846) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01813 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 1651846 9142436 Bmur_1448 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633735.1 1650239 R 526224 CDS YP_003633736.1 296126484 9142437 complement(1652081..1652836) 1 NC_014150.1 KEGG: bhy:BHWA1_01740 imidazoleglycerol phosphate synthase; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; Imidazole glycerol phosphate synthase cyclase subunit 1652836 9142437 Bmur_1449 Brachyspira murdochii DSM 12563 Imidazole glycerol phosphate synthase cyclase subunit YP_003633736.1 1652081 R 526224 CDS YP_003633737.1 296126485 9142438 1653422..1654183 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_01790 ankyrin repeat-containing protein; ankyrin 1654183 9142438 Bmur_1450 Brachyspira murdochii DSM 12563 ankyrin YP_003633737.1 1653422 D 526224 CDS YP_003633738.1 296126486 9142439 1654956..1655897 1 NC_014150.1 KEGG: bhy:BHWA1_01834 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1655897 9142439 Bmur_1451 Brachyspira murdochii DSM 12563 radical SAM protein YP_003633738.1 1654956 D 526224 CDS YP_003633739.1 296126487 9142441 1657182..1658216 1 NC_014150.1 KEGG: bhy:BHWA1_01878 TPR domain-containing protein; hypothetical protein 1658216 9142441 Bmur_1453 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633739.1 1657182 D 526224 CDS YP_003633740.1 296126488 9142442 1658560..1659429 1 NC_014150.1 KEGG: bhy:BHWA1_01880 hypothetical protein; hypothetical protein 1659429 9142442 Bmur_1454 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633740.1 1658560 D 526224 CDS YP_003633741.1 296126489 9142443 1659698..1660534 1 NC_014150.1 KEGG: bhy:BHWA1_01879 hypothetical protein; hypothetical protein 1660534 9142443 Bmur_1455 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633741.1 1659698 D 526224 CDS YP_003633742.1 296126490 9142444 1660892..1661449 1 NC_014150.1 KEGG: bhy:BHWA1_01882 hypothetical protein; hypothetical protein 1661449 9142444 Bmur_1456 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633742.1 1660892 D 526224 CDS YP_003633743.1 296126491 9142445 1661564..1662607 1 NC_014150.1 KEGG: bhy:BHWA1_01865 ATPase; ATPase 1662607 9142445 Bmur_1457 Brachyspira murdochii DSM 12563 ATPase YP_003633743.1 1661564 D 526224 CDS YP_003633744.1 296126492 9142446 1662610..1663146 1 NC_014150.1 KEGG: bhy:BHWA1_01866 hypothetical protein; hypothetical protein 1663146 9142446 Bmur_1458 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633744.1 1662610 D 526224 CDS YP_003633745.1 296126493 9142447 1663195..1665366 1 NC_014150.1 PFAM: peptidase U32; KEGG: bhy:BHWA1_01867 peptidase/protease; peptidase U32 1665366 9142447 Bmur_1459 Brachyspira murdochii DSM 12563 peptidase U32 YP_003633745.1 1663195 D 526224 CDS YP_003633746.1 296126494 9142448 complement(1665486..1665833) 1 NC_014150.1 KEGG: bhy:BHWA1_00106 hypothetical protein; hypothetical protein 1665833 9142448 Bmur_1460 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633746.1 1665486 R 526224 CDS YP_003633747.1 296126495 9142449 complement(1665929..1666045) 1 NC_014150.1 KEGG: bhy:BHWA1_01131 hypothetical protein; hypothetical protein 1666045 9142449 Bmur_1461 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633747.1 1665929 R 526224 CDS YP_003633748.1 296126496 9142450 complement(1666091..1667665) 1 NC_014150.1 PFAM: arylsulfotransferase; KEGG: bhy:BHWA1_01792 arylsulfate sulfotransferase; arylsulfotransferase 1667665 9142450 Bmur_1462 Brachyspira murdochii DSM 12563 arylsulfotransferase YP_003633748.1 1666091 R 526224 CDS YP_003633749.1 296126497 9142451 1668053..1668772 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00221 ankyrin repeat-containing protein; ankyrin 1668772 9142451 Bmur_1463 Brachyspira murdochii DSM 12563 ankyrin YP_003633749.1 1668053 D 526224 CDS YP_003633750.1 296126498 9142452 1668908..1669129 1 NC_014150.1 PFAM: ankyrin; KEGG: rme:Rmet_5600 ankyrin; ankyrin 1669129 9142452 Bmur_1464 Brachyspira murdochii DSM 12563 ankyrin YP_003633750.1 1668908 D 526224 CDS YP_003633751.1 296126499 9142453 1669160..1669939 1 NC_014150.1 KEGG: eel:EUBELI_01714 hypothetical protein; hypothetical protein 1669939 9142453 Bmur_1465 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633751.1 1669160 D 526224 CDS YP_003633752.1 296126500 9142454 1670088..1670270 1 NC_014150.1 KEGG: hde:HDEF_0356 lytic murein transglycosylase C, membrane-bound; hypothetical protein 1670270 9142454 Bmur_1466 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633752.1 1670088 D 526224 CDS YP_003633753.1 296126501 9142455 1670615..1670995 1 NC_014150.1 PFAM: protein of unknown function DUF1232; KEGG: bhy:BHWA1_01997 hypothetical protein; hypothetical protein 1670995 9142455 Bmur_1467 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633753.1 1670615 D 526224 CDS YP_003633754.1 296126502 9142456 1671024..1671431 1 NC_014150.1 KEGG: bhy:BHWA1_01998 hypothetical protein; hypothetical protein 1671431 9142456 Bmur_1468 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633754.1 1671024 D 526224 CDS YP_003633755.1 296126503 9142457 1671995..1674403 1 NC_014150.1 KEGG: bhy:BHWA1_01989 hypothetical protein; hypothetical protein 1674403 9142457 Bmur_1469 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633755.1 1671995 D 526224 CDS YP_003633756.1 296126504 9142458 1674978..1676576 1 NC_014150.1 KEGG: bhy:BHWA1_01695 hypothetical protein; hypothetical protein 1676576 9142458 Bmur_1470 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633756.1 1674978 D 526224 CDS YP_003633757.1 296126505 9142459 1676587..1677543 1 NC_014150.1 KEGG: azo:azo3589 glycosyltransferase; glycosyltransferase 1677543 9142459 Bmur_1471 Brachyspira murdochii DSM 12563 glycosyltransferase YP_003633757.1 1676587 D 526224 CDS YP_003633758.1 296126506 9142460 1677559..1678680 1 NC_014150.1 KEGG: pin:Ping_0450 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1678680 9142460 Bmur_1472 Brachyspira murdochii DSM 12563 FAD dependent oxidoreductase YP_003633758.1 1677559 D 526224 CDS YP_003633759.1 296126507 9142461 1678677..1679555 1 NC_014150.1 KEGG: pin:Ping_0449 glycosyl transferase; hypothetical protein 1679555 9142461 Bmur_1473 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633759.1 1678677 D 526224 CDS YP_003633760.1 296126508 9142462 1679581..1680375 1 NC_014150.1 KEGG: pin:Ping_0447 dolichyl-phosphate beta-D- mannosyltransferase; dolichyl-phosphate beta-D-mannosyltransferase 1680375 9142462 Bmur_1474 Brachyspira murdochii DSM 12563 dolichyl-phosphate beta-D-mannosyltransferase YP_003633760.1 1679581 D 526224 CDS YP_003633761.1 296126509 9142463 1680393..1681505 1 NC_014150.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bhy:BHWA1_00926 oxidoreductase domain containing protein; oxidoreductase domain-containing protein 1681505 9142463 Bmur_1475 Brachyspira murdochii DSM 12563 oxidoreductase domain-containing protein YP_003633761.1 1680393 D 526224 CDS YP_003633762.1 296126510 9142464 1681498..1682433 1 NC_014150.1 KEGG: rsq:Rsph17025_4042 hypothetical protein; hypothetical protein 1682433 9142464 Bmur_1476 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633762.1 1681498 D 526224 CDS YP_003633763.1 296126511 9142465 1682433..1683254 1 NC_014150.1 PFAM: xylose isomerase domain protein TIM barrel; KEGG: dze:Dd1591_3407 xylose isomerase domain protein TIM barrel; xylose isomerase domain protein TIM barrel 1683254 9142465 Bmur_1477 Brachyspira murdochii DSM 12563 xylose isomerase domain protein TIM barrel YP_003633763.1 1682433 D 526224 CDS YP_003633764.1 296126512 9142466 1683271..1684056 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: dze:Dd1591_3405 dolichyl-phosphate beta-D- mannosyltransferase; glycosyl transferase 1684056 9142466 Bmur_1478 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003633764.1 1683271 D 526224 CDS YP_003633765.1 296126513 9142467 1684211..1684864 1 NC_014150.1 TIGRFAM: transaldolase; KEGG: bhy:BHWA1_01968 transaldolase; PFAM: transaldolase; transaldolase 1684864 9142467 Bmur_1479 Brachyspira murdochii DSM 12563 transaldolase YP_003633765.1 1684211 D 526224 CDS YP_003633766.1 296126514 9142468 complement(1685564..1687555) 1 NC_014150.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin- helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: bhy:BHWA1_01986 NAD-dependent DNA ligase LigA; PFAM: NAD-dependent DNA ligase adenylation; NAD- dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase 1687555 9142468 Bmur_1480 Brachyspira murdochii DSM 12563 NAD-dependent DNA ligase YP_003633766.1 1685564 R 526224 CDS YP_003633767.1 296126515 9142469 complement(1687593..1687787) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1687787 9142469 Bmur_1481 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633767.1 1687593 R 526224 CDS YP_003633768.1 296126516 9142470 1687865..1688080 1 NC_014150.1 KEGG: bhy:BHWA1_02009 hypothetical protein; hypothetical protein 1688080 9142470 Bmur_1482 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633768.1 1687865 D 526224 CDS YP_003633769.1 296126517 9142471 1688077..1688337 1 NC_014150.1 KEGG: bhy:BHWA1_02010 RelE, cytotoxic translational repressor of toxin-antitoxin stability system; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 1688337 9142471 Bmur_1483 Brachyspira murdochii DSM 12563 RelE/StbE family addiction module toxin YP_003633769.1 1688077 D 526224 CDS YP_003633770.1 296126518 9142472 complement(1688506..1690269) 1 NC_014150.1 KEGG: bhy:BHWA1_01803 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase- type; aspartyl-tRNA synthetase 1690269 9142472 Bmur_1484 Brachyspira murdochii DSM 12563 aspartyl-tRNA synthetase YP_003633770.1 1688506 R 526224 CDS YP_003633771.1 296126519 9142473 complement(1690421..1693279) 1 NC_014150.1 PFAM: SMC domain protein; KEGG: bhy:BHWA1_01898 chromosome partition protein SmC; SMC domain-containing protein 1693279 9142473 Bmur_1485 Brachyspira murdochii DSM 12563 SMC domain-containing protein YP_003633771.1 1690421 R 526224 CDS YP_003633772.1 296126520 9142474 1693894..1694313 1 NC_014150.1 KEGG: bhy:BHWA1_01899 hypothetical protein; hypothetical protein 1694313 9142474 Bmur_1486 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633772.1 1693894 D 526224 CDS YP_003633773.1 296126521 9142475 complement(1694623..1695531) 1 NC_014150.1 KEGG: bhy:BHWA1_00754 hypothetical protein; hypothetical protein 1695531 9142475 Bmur_1487 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633773.1 1694623 R 526224 CDS YP_003633774.1 296126522 9142476 complement(1695796..1697775) 1 NC_014150.1 PFAM: UvrD/REP helicase; KEGG: bhy:BHWA1_01808 ATP-dependent DNA helicase; UvrD/REP helicase 1697775 9142476 Bmur_1488 Brachyspira murdochii DSM 12563 UvrD/REP helicase YP_003633774.1 1695796 R 526224 CDS YP_003633775.1 296126523 9142477 1698000..1699469 1 NC_014150.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: bhy:BHWA1_01876 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 1699469 9142477 Bmur_1489 Brachyspira murdochii DSM 12563 carboxyl-terminal protease YP_003633775.1 1698000 D 526224 CDS YP_003633776.1 296126524 9142478 1699786..1703226 1 NC_014150.1 KEGG: bhy:BHWA1_00014 molybdate metabolism regulator; molybdate metabolism regulator 1703226 9142478 Bmur_1490 Brachyspira murdochii DSM 12563 molybdate metabolism regulator YP_003633776.1 1699786 D 526224 CDS YP_003633777.1 296126525 9142479 complement(1703423..1703821) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1703821 9142479 Bmur_1491 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633777.1 1703423 R 526224 CDS YP_003633778.1 296126526 9142480 complement(1703835..1704188) 1 NC_014150.1 KEGG: lpc:LPC_1152 hypothetical protein; hypothetical protein 1704188 9142480 Bmur_1492 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633778.1 1703835 R 526224 CDS YP_003633779.1 296126527 9142481 complement(1704387..1705010) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1705010 9142481 Bmur_1493 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633779.1 1704387 R 526224 CDS YP_003633780.1 296126528 9142482 complement(1705097..1705288) 1 NC_014150.1 hypothetical protein 1705288 9142482 Bmur_1494 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633780.1 1705097 R 526224 CDS YP_003633781.1 296126529 9142483 complement(1705829..1706941) 1 NC_014150.1 PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_01600 variable surface protein - VspE; serpulina hyodysenteriae variable surface protein 1706941 9142483 Bmur_1495 Brachyspira murdochii DSM 12563 serpulina hyodysenteriae variable surface protein YP_003633781.1 1705829 R 526224 CDS YP_003633782.1 296126530 9142484 1707233..1708630 1 NC_014150.1 KEGG: bhy:BHWA1_01183 hypothetical protein; hypothetical protein 1708630 9142484 Bmur_1496 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633782.1 1707233 D 526224 CDS YP_003633783.1 296126531 9142485 complement(1708851..1710131) 1 NC_014150.1 TIGRFAM: seryl-tRNA synthetase; KEGG: bhy:BHWA1_01617 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like; seryl-tRNA synthetase 1710131 9142485 Bmur_1497 Brachyspira murdochii DSM 12563 seryl-tRNA synthetase YP_003633783.1 1708851 R 526224 CDS YP_003633784.1 296126532 9142486 complement(1710339..1711646) 1 NC_014150.1 KEGG: bhy:BHWA1_01625 Holliday junction resolvase helicase subunit-like ATPase; PFAM: ATPase AAA; SMART: AAA ATPase; ATPase AAA 1711646 9142486 Bmur_1498 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633784.1 1710339 R 526224 CDS YP_003633785.1 296126533 9142487 complement(1711627..1712619) 1 NC_014150.1 KEGG: bhy:BHWA1_01626 hypothetical protein; hypothetical protein 1712619 9142487 Bmur_1499 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633785.1 1711627 R 526224 CDS YP_003633786.1 296126534 9142488 1712826..1714676 1 NC_014150.1 KEGG: bhy:BHWA1_01627 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1714676 9142488 Bmur_1500 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633786.1 1712826 D 526224 CDS YP_003633787.1 296126535 9142489 1714974..1716575 1 NC_014150.1 PFAM: flagellar hook-length control protein; KEGG: bhy:BHWA1_02001 flagellar hook-length control domain containing protein; flagellar hook-length control protein 1716575 9142489 Bmur_1501 Brachyspira murdochii DSM 12563 flagellar hook-length control protein YP_003633787.1 1714974 D 526224 CDS YP_003633788.1 296126536 9142490 1716648..1717439 1 NC_014150.1 PFAM: flagellar hook capping protein; KEGG: bhy:BHWA1_02000 flagellar hook capping protein; flagellar hook capping protein 1717439 9142490 Bmur_1502 Brachyspira murdochii DSM 12563 flagellar hook capping protein YP_003633788.1 1716648 D 526224 CDS YP_003633789.1 296126537 9142491 1717914..1718966 1 NC_014150.1 KEGG: bhy:BHWA1_01748 ABC transport related protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; ABC transporter 1718966 9142491 Bmur_1503 Brachyspira murdochii DSM 12563 ABC transporter YP_003633789.1 1717914 D 526224 CDS YP_003633790.1 296126538 9142492 1718947..1719627 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_01749 binding-protein-dependent transport system, inner membrane component; binding-protein-dependent transport system inner membrane protein 1719627 9142492 Bmur_1504 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003633790.1 1718947 D 526224 CDS YP_003633791.1 296126539 9142493 1719683..1720651 1 NC_014150.1 KEGG: bhy:BHWA1_01750 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; L-lactate dehydrogenase 1720651 9142493 Bmur_1505 Brachyspira murdochii DSM 12563 L-lactate dehydrogenase YP_003633791.1 1719683 D 526224 CDS YP_003633792.1 296126540 9142494 1720743..1721543 1 NC_014150.1 PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01751 BlpG, outer membrane lipoprotein; NLPA lipoprotein 1721543 9142494 Bmur_1506 Brachyspira murdochii DSM 12563 NLPA lipoprotein YP_003633792.1 1720743 D 526224 CDS YP_003633793.1 296126541 9142495 1721569..1722366 1 NC_014150.1 PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01752 BlpF, outer membrane lipoprotein; NLPA lipoprotein 1722366 9142495 Bmur_1507 Brachyspira murdochii DSM 12563 NLPA lipoprotein YP_003633793.1 1721569 D 526224 CDS YP_003633794.1 296126542 9142496 1722384..1723181 1 NC_014150.1 PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01753 BlpE, outer membrane lipoprotein; NLPA lipoprotein 1723181 9142496 Bmur_1508 Brachyspira murdochii DSM 12563 NLPA lipoprotein YP_003633794.1 1722384 D 526224 CDS YP_003633795.1 296126543 9142497 1723285..1724085 1 NC_014150.1 PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01754 BmpB, outer membrane lipoprotein; NLPA lipoprotein 1724085 9142497 Bmur_1509 Brachyspira murdochii DSM 12563 NLPA lipoprotein YP_003633795.1 1723285 D 526224 CDS YP_003633796.1 296126544 9142498 1724240..1725049 1 NC_014150.1 PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01754 BmpB, outer membrane lipoprotein; NLPA lipoprotein 1725049 9142498 Bmur_1510 Brachyspira murdochii DSM 12563 NLPA lipoprotein YP_003633796.1 1724240 D 526224 CDS YP_003633797.1 296126545 9142499 complement(1725150..1726775) 1 NC_014150.1 PFAM: carboxylesterase type B; KEGG: carboxylesterase type B; carboxylesterase type B 1726775 9142499 Bmur_1511 Brachyspira murdochii DSM 12563 carboxylesterase type B YP_003633797.1 1725150 R 526224 CDS YP_003633798.1 296126546 9142500 1727074..1727715 1 NC_014150.1 KEGG: bhy:BHWA1_01948 hypothetical protein; hypothetical protein 1727715 9142500 Bmur_1512 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633798.1 1727074 D 526224 CDS YP_003633799.1 296126547 9142501 1727726..1728955 1 NC_014150.1 PFAM: extracellular solute-binding protein family 1; KEGG: bhy:BHWA1_02375 spermidine/putrescine transport ATP-binding protein PotA; ABC transporter substrate-binding protein 1728955 9142501 Bmur_1513 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633799.1 1727726 D 526224 CDS YP_003633800.1 296126548 9142502 complement(1729062..1729679) 1 NC_014150.1 PFAM: cyclase; KEGG: bhy:BHWA1_01949 cyclase; cyclase 1729679 9142502 Bmur_1514 Brachyspira murdochii DSM 12563 cyclase YP_003633800.1 1729062 R 526224 CDS YP_003633801.1 296126549 9142503 complement(1729676..1730671) 1 NC_014150.1 KEGG: bhy:BHWA1_01950 integral membrane protein (PIN domain superfamily); PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: nucleotide binding protein PINc; twitching motility protein PilT 1730671 9142503 Bmur_1515 Brachyspira murdochii DSM 12563 twitching motility protein PilT YP_003633801.1 1729676 R 526224 CDS YP_003633802.1 296126550 9142504 complement(1730761..1731336) 1 NC_014150.1 PFAM: transcription factor CarD; KEGG: bhy:BHWA1_01951 transcriptional regulator; CarD family transcriptional regulator 1731336 9142504 Bmur_1516 Brachyspira murdochii DSM 12563 CarD family transcriptional regulator YP_003633802.1 1730761 R 526224 CDS YP_003633803.1 296126551 9142505 complement(1731511..1731606) 1 NC_014150.1 hypothetical protein 1731606 9142505 Bmur_1517 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633803.1 1731511 R 526224 CDS YP_003633804.1 296126552 9142506 complement(1731633..1733126) 1 NC_014150.1 PFAM: sodium:neurotransmitter symporter; KEGG: bhy:BHWA1_01462 sodium dependant transporter; sodium:neurotransmitter symporter 1733126 9142506 Bmur_1518 Brachyspira murdochii DSM 12563 sodium:neurotransmitter symporter YP_003633804.1 1731633 R 526224 CDS YP_003633805.1 296126553 9142507 complement(1733653..1734462) 1 NC_014150.1 KEGG: bhy:BHWA1_01881 hypothetical protein; hypothetical protein 1734462 9142507 Bmur_1519 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633805.1 1733653 R 526224 CDS YP_003633806.1 296126554 9142508 complement(1734716..1735585) 1 NC_014150.1 KEGG: bhy:BHWA1_01880 hypothetical protein; hypothetical protein 1735585 9142508 Bmur_1520 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633806.1 1734716 R 526224 CDS YP_003633807.1 296126555 9142509 complement(1736031..1737230) 1 NC_014150.1 KEGG: bhy:BHWA1_02028 bifunctional riboflavin biosynthesis protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1737230 9142509 Bmur_1521 Brachyspira murdochii DSM 12563 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_003633807.1 1736031 R 526224 CDS YP_003633808.1 296126556 9142510 complement(1737304..1737957) 1 NC_014150.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: bhy:BHWA1_02027 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 1737957 9142510 Bmur_1522 Brachyspira murdochii DSM 12563 riboflavin synthase subunit alpha YP_003633808.1 1737304 R 526224 CDS YP_003633809.1 296126557 9142511 complement(1738134..1739240) 1 NC_014150.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bhy:BHWA1_02026 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 1739240 9142511 Bmur_1523 Brachyspira murdochii DSM 12563 riboflavin biosynthesis protein RibD YP_003633809.1 1738134 R 526224 CDS YP_003633810.1 296126558 9142512 complement(1739578..1740003) 1 NC_014150.1 KEGG: ngk:NGK_1958 very short patch repair endonuclease; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr 1740003 9142512 Bmur_1524 Brachyspira murdochii DSM 12563 DNA mismatch endonuclease Vsr YP_003633810.1 1739578 R 526224 CDS YP_003633811.1 296126559 9142513 complement(1740022..1741185) 1 NC_014150.1 KEGG: coc:Coch_0821 hypothetical protein; hypothetical protein 1741185 9142513 Bmur_1525 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633811.1 1740022 R 526224 CDS YP_003633812.1 296126560 9142514 complement(1741204..1742139) 1 NC_014150.1 KEGG: coc:Coch_0822 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 1742139 9142514 Bmur_1526 Brachyspira murdochii DSM 12563 DNA-cytosine methyltransferase YP_003633812.1 1741204 R 526224 CDS YP_003633813.1 296126561 9142515 complement(1742288..1744228) 1 NC_014150.1 PFAM: fructose-16-bisphosphatase; KEGG: bhy:BHWA1_01708 fructose-1,6-bisphosphatase; fructose-16-bisphosphatase 1744228 9142515 Bmur_1527 Brachyspira murdochii DSM 12563 fructose-16-bisphosphatase YP_003633813.1 1742288 R 526224 CDS YP_003633814.1 296126562 9142519 1744767..1745480 1 NC_014150.1 KEGG: bhy:BHWA1_01714 hypothetical protein; hypothetical protein 1745480 9142519 Bmur_1528 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633814.1 1744767 D 526224 CDS YP_003633815.1 296126563 9142521 1745673..1746857 1 NC_014150.1 KEGG: bhy:BHWA1_01978 hypothetical protein; hypothetical protein 1746857 9142521 Bmur_1529 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633815.1 1745673 D 526224 CDS YP_003633816.1 296126564 9142522 complement(1746864..1748042) 1 NC_014150.1 KEGG: bhy:BHWA1_01717 abortive infection protein; abortive infection protein 1748042 9142522 Bmur_1530 Brachyspira murdochii DSM 12563 abortive infection protein YP_003633816.1 1746864 R 526224 CDS YP_003633817.1 296126565 9142523 complement(1748339..1749007) 1 NC_014150.1 KEGG: bhy:BHWA1_01747 hypothetical protein; hypothetical protein 1749007 9142523 Bmur_1531 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633817.1 1748339 R 526224 CDS YP_003633818.1 296126566 9142524 complement(1749299..1751575) 1 NC_014150.1 KEGG: bhy:BHWA1_01746 ZntA, cation transport ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase 1751575 9142524 Bmur_1532 Brachyspira murdochii DSM 12563 heavy metal translocating P-type ATPase YP_003633818.1 1749299 R 526224 CDS YP_003633819.1 296126567 9142525 1752382..1752777 1 NC_014150.1 KEGG: bhy:BHWA1_01702 hypothetical protein; hypothetical protein 1752777 9142525 Bmur_1533 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633819.1 1752382 D 526224 CDS YP_003633820.1 296126568 9142526 1752900..1754072 1 NC_014150.1 PFAM: peptidase M30, hyicolysin; KEGG: bhy:BHWA1_01703 hypothetical protein; peptidase M30, hyicolysin 1754072 9142526 Bmur_1534 Brachyspira murdochii DSM 12563 peptidase M30, hyicolysin YP_003633820.1 1752900 D 526224 CDS YP_003633821.1 296126569 9142527 complement(1754355..1756832) 1 NC_014150.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: bhy:BHWA1_01721 ATP-dependent protease La; PFAM: ATPase AAA; peptidase S16 lon domain protein; ATP-dependent protease La 1756832 9142527 Bmur_1535 Brachyspira murdochii DSM 12563 ATP-dependent protease La YP_003633821.1 1754355 R 526224 CDS YP_003633822.1 296126570 9142528 complement(1757696..1758292) 1 NC_014150.1 KEGG: bhy:BHWA1_01785 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; Sua5/YciO/YrdC/YwlC family protein 1758292 9142528 Bmur_1536 Brachyspira murdochii DSM 12563 Sua5/YciO/YrdC/YwlC family protein YP_003633822.1 1757696 R 526224 CDS YP_003633823.1 296126571 9142529 complement(1758299..1759321) 1 NC_014150.1 TIGRFAM: diguanylate cyclase; PFAM: response regulator receiver; GGDEF domain containing protein; KEGG: bhy:BHWA1_01784 response regulatory protein; SMART: response regulator receiver; response regulator receiver modulated diguanylate cyclase 1759321 9142529 Bmur_1537 Brachyspira murdochii DSM 12563 response regulator receiver modulated diguanylate cyclase YP_003633823.1 1758299 R 526224 CDS YP_003633824.1 296126572 9142530 1759499..1760929 1 NC_014150.1 KEGG: gyc:GYMC61_3383 hypothetical protein; hypothetical protein 1760929 9142530 Bmur_1538 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633824.1 1759499 D 526224 CDS YP_003633825.1 296126573 9142531 1760932..1761534 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1761534 9142531 Bmur_1539 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633825.1 1760932 D 526224 CDS YP_003633826.1 296126574 9142532 1761624..1762982 1 NC_014150.1 TIGRFAM: aspartate kinase; KEGG: bhy:BHWA1_01701 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase 1762982 9142532 Bmur_1540 Brachyspira murdochii DSM 12563 aspartate kinase YP_003633826.1 1761624 D 526224 CDS YP_003633827.1 296126575 9142533 complement(1763333..1764562) 1 NC_014150.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_02257 cinnamyl-alcohol dehydrogenase ELI3-2 (cad); molecular chaperone GroES 1764562 9142533 Bmur_1541 Brachyspira murdochii DSM 12563 molecular chaperone GroES YP_003633827.1 1763333 R 526224 CDS YP_003633828.1 296126576 9142534 complement(1764796..1766238) 1 NC_014150.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: bhy:BHWA1_01906 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 1766238 9142534 Bmur_1542 Brachyspira murdochii DSM 12563 polysaccharide biosynthesis protein CapD YP_003633828.1 1764796 R 526224 CDS YP_003633829.1 296126577 9142535 complement(1767626..1768156) 1 NC_014150.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: bhy:BHWA1_01908 hypoxanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1768156 9142535 Bmur_1543 Brachyspira murdochii DSM 12563 hypoxanthine phosphoribosyltransferase YP_003633829.1 1767626 R 526224 CDS YP_003633830.1 296126578 9142536 complement(1768370..1769389) 1 NC_014150.1 KEGG: bhy:BHWA1_01909 electron transfer flavoprotein alpha subunit; PFAM: electron transfer flavoprotein alpha/beta- subunit ; electron transfer flavoprotein alpha subunit; SMART: electron transfer flavoprotein alpha/beta- subunit; electron transfer flavoprotein alpha/beta- subunit 1769389 9142536 Bmur_1544 Brachyspira murdochii DSM 12563 electron transfer flavoprotein alpha/beta- subunit YP_003633830.1 1768370 R 526224 CDS YP_003633831.1 296126579 9142537 complement(1769422..1770207) 1 NC_014150.1 KEGG: bhy:BHWA1_01910 electron transfer flavoprotein beta subunit; PFAM: electron transfer flavoprotein alpha/beta- subunit; SMART: electron transfer flavoprotein alpha/beta- subunit; electron transfer flavoprotein alpha/beta- subunit 1770207 9142537 Bmur_1545 Brachyspira murdochii DSM 12563 electron transfer flavoprotein alpha/beta- subunit YP_003633831.1 1769422 R 526224 CDS YP_003633832.1 296126580 9142538 complement(1770244..1771389) 1 NC_014150.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bhy:BHWA1_01911 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1771389 9142538 Bmur_1546 Brachyspira murdochii DSM 12563 acyl-CoA dehydrogenase YP_003633832.1 1770244 R 526224 CDS YP_003633833.1 296126581 9142539 complement(1771447..1772748) 1 NC_014150.1 KEGG: fnu:FN0814 propionate CoA-transferase; PFAM: coenzyme A transferase; SMART: coenzyme A transferase; coenzyme A transferase 1772748 9142539 Bmur_1547 Brachyspira murdochii DSM 12563 coenzyme A transferase YP_003633833.1 1771447 R 526224 CDS YP_003633834.1 296126582 9142540 1773375..1773989 1 NC_014150.1 PFAM: DivIVA family protein; KEGG: bhy:BHWA1_01912 V-type ATP synthase subunit E; DivIVA family protein 1773989 9142540 Bmur_1548 Brachyspira murdochii DSM 12563 DivIVA family protein YP_003633834.1 1773375 D 526224 CDS YP_003633835.1 296126583 9142541 1774001..1774840 1 NC_014150.1 KEGG: bhy:BHWA1_01913 hypothetical protein; hypothetical protein 1774840 9142541 Bmur_1549 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633835.1 1774001 D 526224 CDS YP_003633836.1 296126584 9142542 1774854..1776617 1 NC_014150.1 KEGG: bhy:BHWA1_01914 V-type ATP synthase subunit A; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; H(+)-transporting two-sector ATPase 1776617 9142542 Bmur_1550 Brachyspira murdochii DSM 12563 H(+)-transporting two-sector ATPase YP_003633836.1 1774854 D 526224 CDS YP_003633837.1 296126585 9142543 1776610..1777932 1 NC_014150.1 PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: bhy:BHWA1_01915 V-type ATP synthase subunit B; H+transporting two-sector ATPase alpha/beta subunit 1777932 9142543 Bmur_1551 Brachyspira murdochii DSM 12563 H+transporting two-sector ATPase alpha/beta subunit YP_003633837.1 1776610 D 526224 CDS YP_003633838.1 296126586 9142544 1777954..1778553 1 NC_014150.1 KEGG: bhy:BHWA1_01916 V-type ATP synthase subunit D; TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit; V-type ATPase subunit D 1778553 9142544 Bmur_1552 Brachyspira murdochii DSM 12563 V-type ATPase subunit D YP_003633838.1 1777954 D 526224 CDS YP_003633839.1 296126587 9142545 1778550..1780418 1 NC_014150.1 PFAM: V-type ATPase 116 kDa subunit; KEGG: bhy:BHWA1_01917 V-type ATP synthase subunit I; V-type ATPase 116 kDa subunit 1780418 9142545 Bmur_1553 Brachyspira murdochii DSM 12563 V-type ATPase 116 kDa subunit YP_003633839.1 1778550 D 526224 CDS YP_003633840.1 296126588 9142546 1780495..1780962 1 NC_014150.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: bhy:BHWA1_01918 V-type ATP synthase subunit K; H+transporting two-sector ATPase subunit C 1780962 9142546 Bmur_1554 Brachyspira murdochii DSM 12563 H+transporting two-sector ATPase subunit C YP_003633840.1 1780495 D 526224 CDS YP_003633841.1 296126589 9142547 1781655..1782704 1 NC_014150.1 SMART: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bhy:BHWA1_01681 glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 1782704 9142547 Bmur_1555 Brachyspira murdochii DSM 12563 glyceraldehyde-3-phosphate dehydrogenase YP_003633841.1 1781655 D 526224 CDS YP_003633842.1 296126590 9142548 1782854..1784053 1 NC_014150.1 KEGG: bhy:BHWA1_01680 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase 1784053 9142548 Bmur_1556 Brachyspira murdochii DSM 12563 phosphoglycerate kinase YP_003633842.1 1782854 D 526224 CDS YP_003633843.1 296126591 9142549 1784347..1784739 1 NC_014150.1 KEGG: bhy:BHWA1_01678 hypothetical protein; hypothetical protein 1784739 9142549 Bmur_1557 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633843.1 1784347 D 526224 CDS YP_003633844.1 296126592 9142550 1784807..1785319 1 NC_014150.1 KEGG: bhy:BHWA1_01677 hypothetical protein; hypothetical protein 1785319 9142550 Bmur_1558 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633844.1 1784807 D 526224 CDS YP_003633845.1 296126593 9142551 1785312..1786499 1 NC_014150.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bhy:BHWA1_01676 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 1786499 9142551 Bmur_1559 Brachyspira murdochii DSM 12563 arginine biosynthesis bifunctional protein ArgJ YP_003633845.1 1785312 D 526224 CDS YP_003633846.1 296126594 9142552 1786576..1789677 1 NC_014150.1 KEGG: bhy:BHWA1_01743 ATP-dependent nuclease subunit B; ATP-dependent nuclease subunit B 1789677 9142552 Bmur_1560 Brachyspira murdochii DSM 12563 ATP-dependent nuclease subunit B YP_003633846.1 1786576 D 526224 CDS YP_003633847.1 296126595 9142553 complement(1789687..1791042) 1 NC_014150.1 PFAM: 5-methylcytosine restriction system component- like protein; KEGG: smu:SMU.1484c hypothetical protein; 5-methylcytosine restriction system component- like protein 1791042 9142553 Bmur_1561 Brachyspira murdochii DSM 12563 5-methylcytosine restriction system component- like protein YP_003633847.1 1789687 R 526224 CDS YP_003633848.1 296126596 9142554 complement(1791085..1792896) 1 NC_014150.1 KEGG: smu:SMU.1485c endonuclease; PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: AAA ATPase; ATPase AAA 1792896 9142554 Bmur_1562 Brachyspira murdochii DSM 12563 ATPase AAA YP_003633848.1 1791085 R 526224 CDS YP_003633849.1 296126597 9142555 complement(1793030..1794841) 1 NC_014150.1 KEGG: bhy:BHWA1_01905 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; GTP- binding protein LepA domain protein; elongation factor Tu domain 2 protein; elongation factor G domain protein; GTP-binding protein LepA 1794841 9142555 Bmur_1563 Brachyspira murdochii DSM 12563 GTP-binding protein LepA YP_003633849.1 1793030 R 526224 CDS YP_003633850.1 296126598 9142556 complement(1794942..1798346) 1 NC_014150.1 PFAM: restriction modification system DNA specificity domain; N-6 DNA methylase; KEGG: cff:CFF8240_1393 restriction and modification enzyme CjeI; restriction modification system DNA specificity domain-containing protein 1798346 9142556 Bmur_1564 Brachyspira murdochii DSM 12563 restriction modification system DNA specificity domain-containing protein YP_003633850.1 1794942 R 526224 CDS YP_003633851.1 296126599 9142557 1798513..1799295 1 NC_014150.1 KEGG: bhy:BHWA1_01904 amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 1799295 9142557 Bmur_1565 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633851.1 1798513 D 526224 CDS YP_003633852.1 296126600 9142558 1799398..1800159 1 NC_014150.1 KEGG: bhy:BHWA1_01903 amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 1800159 9142558 Bmur_1566 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633852.1 1799398 D 526224 CDS YP_003633853.1 296126601 9142559 complement(1800156..1801949) 1 NC_014150.1 PFAM: zinc finger SWIM domain protein; KEGG: bhy:BHWA1_01383 zinc finger SIM domain protein; zinc finger SWIM domain-containing protein 1801949 9142559 Bmur_1567 Brachyspira murdochii DSM 12563 zinc finger SWIM domain-containing protein YP_003633853.1 1800156 R 526224 CDS YP_003633854.1 296126602 9142560 complement(1801966..1802625) 1 NC_014150.1 KEGG: mvu:Metvu_0114 hypothetical protein; hypothetical protein 1802625 9142560 Bmur_1568 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633854.1 1801966 R 526224 CDS YP_003633855.1 296126603 9142561 complement(1802630..1803694) 1 NC_014150.1 KEGG: mvu:Metvu_0115 ATPase; ATPase 1803694 9142561 Bmur_1569 Brachyspira murdochii DSM 12563 ATPase YP_003633855.1 1802630 R 526224 CDS YP_003633856.1 296126604 9142562 complement(1803848..1804786) 1 NC_014150.1 KEGG: bhy:BHWA1_01382 preprotein translocase; TIGRFAM: protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 1804786 9142562 Bmur_1570 Brachyspira murdochii DSM 12563 protein-export membrane protein SecF YP_003633856.1 1803848 R 526224 CDS YP_003633857.1 296126605 9142563 complement(1804859..1806370) 1 NC_014150.1 KEGG: bhy:BHWA1_01381 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 1806370 9142563 Bmur_1571 Brachyspira murdochii DSM 12563 protein-export membrane protein SecD YP_003633857.1 1804859 R 526224 CDS YP_003633858.1 296126606 9142564 complement(1806401..1806829) 1 NC_014150.1 KEGG: bhy:BHWA1_01380 preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC 1806829 9142564 Bmur_1572 Brachyspira murdochii DSM 12563 preprotein translocase subunit YajC YP_003633858.1 1806401 R 526224 CDS YP_003633859.1 296126607 9142565 complement(1807001..1807978) 1 NC_014150.1 KEGG: cco:CCC13826_1743 nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 1807978 9142565 Bmur_1573 Brachyspira murdochii DSM 12563 nitrogenase cofactor biosynthesis protein NifB YP_003633859.1 1807001 R 526224 CDS YP_003633860.1 296126608 9142566 complement(1808025..1808735) 1 NC_014150.1 KEGG: cdl:CDR20291_1332 aliphatic sulfonates ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1808735 9142566 Bmur_1574 Brachyspira murdochii DSM 12563 ABC transporter YP_003633860.1 1808025 R 526224 CDS YP_003633861.1 296126609 9142567 complement(1808725..1809525) 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdf:CD2991 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 1809525 9142567 Bmur_1575 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003633861.1 1808725 R 526224 CDS YP_003633862.1 296126610 9142568 1809671..1810300 1 NC_014150.1 KEGG: mno:Mnod_8422 hypothetical protein; hypothetical protein 1810300 9142568 Bmur_1576 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633862.1 1809671 D 526224 CDS YP_003633863.1 296126611 9142570 1810532..1810756 1 NC_014150.1 KEGG: bhy:BHWA1_01377 hypothetical protein; hypothetical protein 1810756 9142570 Bmur_1577 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633863.1 1810532 D 526224 CDS YP_003633864.1 296126612 9142571 complement(1810760..1811047) 1 NC_014150.1 KEGG: bhy:BHWA1_01376 hypothetical protein; hypothetical protein 1811047 9142571 Bmur_1578 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633864.1 1810760 R 526224 CDS YP_003633865.1 296126613 9142572 complement(1811661..1814801) 1 NC_014150.1 PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_02039 acriflavin resistance protein; acriflavin resistance protein 1814801 9142572 Bmur_1579 Brachyspira murdochii DSM 12563 acriflavin resistance protein YP_003633865.1 1811661 R 526224 CDS YP_003633866.1 296126614 9142573 complement(1814833..1816023) 1 NC_014150.1 KEGG: bhy:BHWA1_02038 membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1816023 9142573 Bmur_1580 Brachyspira murdochii DSM 12563 RND family efflux transporter MFP subunit YP_003633866.1 1814833 R 526224 CDS YP_003633867.1 296126615 9142574 complement(1816034..1817398) 1 NC_014150.1 PFAM: outer membrane efflux protein; KEGG: bhy:BHWA1_02037 outer membrane protein; outer membrane efflux protein 1817398 9142574 Bmur_1581 Brachyspira murdochii DSM 12563 outer membrane efflux protein YP_003633867.1 1816034 R 526224 CDS YP_003633868.1 296126616 9142575 1817904..1818161 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1818161 9142575 Bmur_1582 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633868.1 1817904 D 526224 CDS YP_003633869.1 296126617 9142576 complement(1818247..1819074) 1 NC_014150.1 PFAM: SCP-like extracellular; KEGG: bhy:BHWA1_01489 SCP-like extracellular protein; hypothetical protein 1819074 9142576 Bmur_1583 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633869.1 1818247 R 526224 CDS YP_003633870.1 296126618 9142577 1819280..1820839 1 NC_014150.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bhy:BHWA1_01488 hypothetical protein; NAD-dependent epimerase/dehydratase 1820839 9142577 Bmur_1584 Brachyspira murdochii DSM 12563 NAD-dependent epimerase/dehydratase YP_003633870.1 1819280 D 526224 CDS YP_003633871.1 296126619 9142578 1820867..1821814 1 NC_014150.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01487 hypothetical ferrotoxin domain protein; 4Fe-4S ferredoxin 1821814 9142578 Bmur_1585 Brachyspira murdochii DSM 12563 4Fe-4S ferredoxin YP_003633871.1 1820867 D 526224 CDS YP_003633872.1 296126620 9142579 1821907..1822839 1 NC_014150.1 KEGG: bhy:BHWA1_01486 hypothetical protein; hypothetical protein 1822839 9142579 Bmur_1586 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633872.1 1821907 D 526224 CDS YP_003633873.1 296126621 9142580 complement(1823201..1824439) 1 NC_014150.1 KEGG: bhy:BHWA1_01521 hypothetical protein; hypothetical protein 1824439 9142580 Bmur_1587 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633873.1 1823201 R 526224 CDS YP_003633874.1 296126622 9142581 1824608..1826209 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01522 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 1826209 9142581 Bmur_1588 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633874.1 1824608 D 526224 CDS YP_003633875.1 296126623 9142582 complement(1826551..1827201) 1 NC_014150.1 KEGG: viral A-type inclusion protein; hypothetical protein 1827201 9142582 Bmur_1589 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633875.1 1826551 R 526224 CDS YP_003633876.1 296126624 9142583 1827369..1828961 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01524 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 1828961 9142583 Bmur_1590 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633876.1 1827369 D 526224 CDS YP_003633877.1 296126625 9142584 complement(1829232..1829834) 1 NC_014150.1 KEGG: bhy:BHWA1_01634 segregation and condesation protein B; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; chromosome segregation and condensation protein ScpB 1829834 9142584 Bmur_1591 Brachyspira murdochii DSM 12563 chromosome segregation and condensation protein ScpB YP_003633877.1 1829232 R 526224 CDS YP_003633878.1 296126626 9142585 1830502..1830981 1 NC_014150.1 KEGG: bhy:BHWA1_02052 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein 1830981 9142585 Bmur_1592 Brachyspira murdochii DSM 12563 SsrA-binding protein YP_003633878.1 1830502 D 526224 CDS YP_003633879.1 296126627 9142586 complement(1830987..1831265) 1 NC_014150.1 KEGG: bhy:BHWA1_02053 hypothetical protein; hypothetical protein 1831265 9142586 Bmur_1593 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633879.1 1830987 R 526224 CDS YP_003633880.1 296126628 9142587 complement(1831278..1832456) 1 NC_014150.1 KEGG: bhy:BHWA1_02054 hypothetical protein; hypothetical protein 1832456 9142587 Bmur_1594 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633880.1 1831278 R 526224 CDS YP_003633881.1 296126629 9142588 complement(1832703..1832969) 1 NC_014150.1 KEGG: bhy:BHWA1_02055 co-chaperonin GroES; PFAM: chaperonin Cpn10; SMART: chaperonin Cpn10; chaperonin Cpn10 1832969 9142588 Bmur_1595 Brachyspira murdochii DSM 12563 chaperonin Cpn10 YP_003633881.1 1832703 R 526224 CDS YP_003633882.1 296126630 9142589 complement(1833068..1833580) 1 NC_014150.1 KEGG: bhy:BHWA1_02056 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase 1833580 9142589 Bmur_1596 Brachyspira murdochii DSM 12563 adenine phosphoribosyltransferase YP_003633882.1 1833068 R 526224 CDS YP_003633883.1 296126631 9142590 complement(1833673..1835055) 1 NC_014150.1 KEGG: bhy:BHWA1_01621 Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1835055 9142590 Bmur_1597 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003633883.1 1833673 R 526224 CDS YP_003633884.1 296126632 9142591 1835398..1835847 1 NC_014150.1 KEGG: lmh:LMHCC_1999 Rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 1835847 9142591 Bmur_1598 Brachyspira murdochii DSM 12563 BadM/Rrf2 family transcriptional regulator YP_003633884.1 1835398 D 526224 CDS YP_003633885.1 296126633 9142592 1835860..1837509 1 NC_014150.1 KEGG: cpr:CPR_1120 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane; hybrid cluster protein 1837509 9142592 Bmur_1599 Brachyspira murdochii DSM 12563 hybrid cluster protein YP_003633885.1 1835860 D 526224 CDS YP_003633886.1 296126634 9142593 complement(1838113..1839036) 1 NC_014150.1 KEGG: bhy:BHWA1_01512 thermonuclease; thermonuclease 1839036 9142593 Bmur_1600 Brachyspira murdochii DSM 12563 thermonuclease YP_003633886.1 1838113 R 526224 CDS YP_003633887.1 296126635 9142594 complement(1839000..1839704) 1 NC_014150.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: bhy:BHWA1_01513 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 1839704 9142594 Bmur_1601 Brachyspira murdochii DSM 12563 thiamine-phosphate pyrophosphorylase YP_003633887.1 1839000 R 526224 CDS YP_003633888.1 296126636 9142595 complement(1839911..1841515) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02059 oligopeptide ABC transporter periplasmic subunit; ABC transporter substrate-binding protein 1841515 9142595 Bmur_1602 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003633888.1 1839911 R 526224 CDS YP_003633889.1 296126637 9142596 complement(1841866..1844280) 1 NC_014150.1 KEGG: bhy:BHWA1_01941 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein; hypothetical protein 1844280 9142596 Bmur_1603 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633889.1 1841866 R 526224 CDS YP_003633890.1 296126638 9142597 1844565..1844798 1 NC_014150.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01942 ferredoxin; 4Fe-4S ferredoxin 1844798 9142597 Bmur_1604 Brachyspira murdochii DSM 12563 4Fe-4S ferredoxin YP_003633890.1 1844565 D 526224 CDS YP_003633891.1 296126639 9142598 1844799..1845854 1 NC_014150.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: bhy:BHWA1_01943 2-ketoisovalerate ferredoxin reductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1845854 9142598 Bmur_1605 Brachyspira murdochii DSM 12563 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_003633891.1 1844799 D 526224 CDS YP_003633892.1 296126640 9142599 1845851..1846585 1 NC_014150.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bhy:BHWA1_01944 thiamine pyrophosphate; thiamine pyrophosphate domain-containing TPP-binding protein 1846585 9142599 Bmur_1606 Brachyspira murdochii DSM 12563 thiamine pyrophosphate domain-containing TPP-binding protein YP_003633892.1 1845851 D 526224 CDS YP_003633893.1 296126641 9142600 1846599..1847153 1 NC_014150.1 KEGG: bhy:BHWA1_01945 pyruvate ferredoxin oxireductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate/ketoisovalerate oxidoreductase; pyruvate/ketoisovalerate oxidoreductase subunit gamma 1847153 9142600 Bmur_1607 Brachyspira murdochii DSM 12563 pyruvate/ketoisovalerate oxidoreductase subunit gamma YP_003633893.1 1846599 D 526224 CDS YP_003633894.1 296126642 9142601 1847419..1848339 1 NC_014150.1 KEGG: bhy:BHWA1_01653 hypothetical protein; hypothetical protein 1848339 9142601 Bmur_1608 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633894.1 1847419 D 526224 CDS YP_003633895.1 296126643 9142603 1849512..1850642 1 NC_014150.1 PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_01601 variable surface protein - VspF; serpulina hyodysenteriae variable surface protein 1850642 9142603 Bmur_1610 Brachyspira murdochii DSM 12563 serpulina hyodysenteriae variable surface protein YP_003633895.1 1849512 D 526224 CDS YP_003633896.1 296126644 9142604 1851034..1851990 1 NC_014150.1 KEGG: bhy:BHWA1_01298 hypothetical protein; hypothetical protein 1851990 9142604 Bmur_1611 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633896.1 1851034 D 526224 CDS YP_003633897.1 296126645 9142605 1852077..1852628 1 NC_014150.1 KEGG: bhy:BHWA1_01654 hypothetical protein; hypothetical protein 1852628 9142605 Bmur_1612 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633897.1 1852077 D 526224 CDS YP_003633898.1 296126646 9142606 1852888..1854801 1 NC_014150.1 KEGG: bhy:BHWA1_01652 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein FlgK 1854801 9142606 Bmur_1613 Brachyspira murdochii DSM 12563 flagellar hook-associated protein FlgK YP_003633898.1 1852888 D 526224 CDS YP_003633899.1 296126647 9142607 1855053..1857887 1 NC_014150.1 KEGG: bhy:BHWA1_01651 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1857887 9142607 Bmur_1614 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633899.1 1855053 D 526224 CDS YP_003633900.1 296126648 9142608 1858049..1859113 1 NC_014150.1 KEGG: bhy:BHWA1_01658 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 1859113 9142608 Bmur_1615 Brachyspira murdochii DSM 12563 histidinol-phosphate aminotransferase YP_003633900.1 1858049 D 526224 CDS YP_003633901.1 296126649 9142609 complement(1859110..1860375) 1 NC_014150.1 PFAM: peptidase M16 domain protein; KEGG: bhy:BHWA1_02046 Zn-dependent peptidase; peptidase M16 domain-containing protein 1860375 9142609 Bmur_1616 Brachyspira murdochii DSM 12563 peptidase M16 domain-containing protein YP_003633901.1 1859110 R 526224 CDS YP_003633902.1 296126650 9142610 complement(1860476..1862989) 1 NC_014150.1 KEGG: bhy:BHWA1_02036 hypothetical protein; hypothetical protein 1862989 9142610 Bmur_1617 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633902.1 1860476 R 526224 CDS YP_003633903.1 296126651 9142611 complement(1863007..1864059) 1 NC_014150.1 KEGG: bhy:BHWA1_01192 adenine-specific methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; adenine-specific DNA-methyltransferase 1864059 9142611 Bmur_1618 Brachyspira murdochii DSM 12563 adenine-specific DNA-methyltransferase YP_003633903.1 1863007 R 526224 CDS YP_003633904.1 296126652 9142612 complement(1864198..1864503) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1864503 9142612 Bmur_1619 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633904.1 1864198 R 526224 CDS YP_003633905.1 296126653 9142613 complement(1864503..1864898) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1864898 9142613 Bmur_1620 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633905.1 1864503 R 526224 CDS YP_003633906.1 296126654 9142614 complement(1865513..1867789) 1 NC_014150.1 KEGG: bhy:BHWA1_02071 hypothetical protein; hypothetical protein 1867789 9142614 Bmur_1621 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633906.1 1865513 R 526224 CDS YP_003633907.1 296126655 9142615 complement(1867822..1868754) 1 NC_014150.1 KEGG: bhy:BHWA1_02070 site-specific recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase; integrase domain protein SAM domain protein; tyrosine recombinase XerD 1868754 9142615 Bmur_1622 Brachyspira murdochii DSM 12563 tyrosine recombinase XerD YP_003633907.1 1867822 R 526224 CDS YP_003633908.1 296126656 9142616 1868978..1869979 1 NC_014150.1 PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_02069 histidinol-phosphate aminotransferase; class I and II aminotransferase 1869979 9142616 Bmur_1623 Brachyspira murdochii DSM 12563 class I and II aminotransferase YP_003633908.1 1868978 D 526224 CDS YP_003633909.1 296126657 9142617 1870086..1870469 1 NC_014150.1 KEGG: bhy:BHWA1_01619 hypothetical protein; hypothetical protein 1870469 9142617 Bmur_1624 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633909.1 1870086 D 526224 CDS YP_003633910.1 296126658 9142618 1870492..1871145 1 NC_014150.1 KEGG: bhy:BHWA1_01620 hypothetical protein; hypothetical protein 1871145 9142618 Bmur_1625 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633910.1 1870492 D 526224 CDS YP_003633911.1 296126659 9142619 1871294..1872004 1 NC_014150.1 KEGG: bhy:BHWA1_01954 hypothetical protein; hypothetical protein 1872004 9142619 Bmur_1626 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633911.1 1871294 D 526224 CDS YP_003633912.1 296126660 9142620 1872123..1872374 1 NC_014150.1 KEGG: bhy:BHWA1_01971 hypothetical protein; hypothetical protein 1872374 9142620 Bmur_1627 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633912.1 1872123 D 526224 CDS YP_003633913.1 296126661 9142621 1872626..1873558 1 NC_014150.1 KEGG: bhy:BHWA1_01972 hypothetical protein; hypothetical protein 1873558 9142621 Bmur_1628 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633913.1 1872626 D 526224 CDS YP_003633914.1 296126662 9142622 1873705..1874607 1 NC_014150.1 KEGG: bhy:BHWA1_01973 nicotinamidase; nicotinamidase 1874607 9142622 Bmur_1629 Brachyspira murdochii DSM 12563 nicotinamidase YP_003633914.1 1873705 D 526224 CDS YP_003633915.1 296126663 9142623 complement(1874899..1875864) 1 NC_014150.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: bhy:BHWA1_01586 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; 3-oxoacyl-ACP synthase 1875864 9142623 Bmur_1630 Brachyspira murdochii DSM 12563 3-oxoacyl-ACP synthase YP_003633915.1 1874899 R 526224 CDS YP_003633916.1 296126664 9142624 complement(1876432..1877853) 1 NC_014150.1 KEGG: bhy:BHWA1_01585 hypothetical protein; hypothetical protein 1877853 9142624 Bmur_1631 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633916.1 1876432 R 526224 CDS YP_003633917.1 296126665 9142625 complement(1877948..1878646) 1 NC_014150.1 PFAM: protein of unknown function DUF45; KEGG: bhy:BHWA1_01584 predicted metal-dependent hydrolase; hypothetical protein 1878646 9142625 Bmur_1632 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633917.1 1877948 R 526224 CDS YP_003633918.1 296126666 9142626 1879006..1880844 1 NC_014150.1 KEGG: bhy:BHWA1_01583 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1880844 9142626 Bmur_1633 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003633918.1 1879006 D 526224 CDS YP_003633919.1 296126667 9142627 complement(1880934..1881608) 1 NC_014150.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bhy:BHWA1_02109 tetrapyrrole (corrin/porphyrin) methylase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 1881608 9142627 Bmur_1634 Brachyspira murdochii DSM 12563 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003633919.1 1880934 R 526224 CDS YP_003633920.1 296126668 9142628 complement(1881647..1882681) 1 NC_014150.1 KEGG: bhy:BHWA1_02108 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase 2; SMART: N-acetylmuramoyl-L-alanine amidase 2; N-acetylmuramoyl-L-alanine amidase 1882681 9142628 Bmur_1635 Brachyspira murdochii DSM 12563 N-acetylmuramoyl-L-alanine amidase YP_003633920.1 1881647 R 526224 CDS YP_003633921.1 296126669 9142629 complement(1882674..1884002) 1 NC_014150.1 KEGG: bhy:BHWA1_02107 hypothetical protein; hypothetical protein 1884002 9142629 Bmur_1636 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633921.1 1882674 R 526224 CDS YP_003633922.1 296126670 9142630 complement(1884112..1884765) 1 NC_014150.1 KEGG: protein serine/threonine kinase; hypothetical protein 1884765 9142630 Bmur_1637 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633922.1 1884112 R 526224 CDS YP_003633923.1 296126671 9142631 1884981..1886345 1 NC_014150.1 KEGG: bhy:BHWA1_02105 membrane associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; zinc metalloprotease 1886345 9142631 Bmur_1638 Brachyspira murdochii DSM 12563 zinc metalloprotease YP_003633923.1 1884981 D 526224 CDS YP_003633924.1 296126672 9142632 1886541..1888952 1 NC_014150.1 KEGG: bhy:BHWA1_02102 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1888952 9142632 Bmur_1639 Brachyspira murdochii DSM 12563 radical SAM protein YP_003633924.1 1886541 D 526224 CDS YP_003633925.1 296126673 9142633 1888984..1889277 1 NC_014150.1 PFAM: Protein of unknown function DUF2314; KEGG: bcx:BCA_2465 hypothetical protein; hypothetical protein 1889277 9142633 Bmur_1640 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633925.1 1888984 D 526224 CDS YP_003633926.1 296126674 9142634 complement(1889301..1890179) 1 NC_014150.1 KEGG: bhy:BHWA1_01628 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 1890179 9142634 Bmur_1641 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633926.1 1889301 R 526224 CDS YP_003633927.1 296126675 9142635 1890334..1891485 1 NC_014150.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_01519 alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1891485 9142635 Bmur_1642 Brachyspira murdochii DSM 12563 iron-containing alcohol dehydrogenase YP_003633927.1 1890334 D 526224 CDS YP_003633928.1 296126676 9142636 complement(1891482..1892345) 1 NC_014150.1 KEGG: bhy:BHWA1_01518 exonuclease; exonuclease 1892345 9142636 Bmur_1643 Brachyspira murdochii DSM 12563 exonuclease YP_003633928.1 1891482 R 526224 CDS YP_003633929.1 296126677 9142637 complement(1892375..1893793) 1 NC_014150.1 SMART: Cysteinyl-tRNA synthetase class Ia DALR; TIGRFAM: cysteinyl-tRNA synthetase; KEGG: bhy:BHWA1_01517 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; cysteinyl-tRNA synthetase 1893793 9142637 Bmur_1644 Brachyspira murdochii DSM 12563 cysteinyl-tRNA synthetase YP_003633929.1 1892375 R 526224 CDS YP_003633930.1 296126678 9142638 complement(1894008..1894103) 1 NC_014150.1 hypothetical protein 1894103 9142638 Bmur_1645 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633930.1 1894008 R 526224 CDS YP_003633931.1 296126679 9142639 complement(1894142..1894732) 1 NC_014150.1 KEGG: bhy:BHWA1_01516 hypothetical protein; hypothetical protein 1894732 9142639 Bmur_1646 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633931.1 1894142 R 526224 CDS YP_003633932.1 296126680 9142640 complement(1894822..1895724) 1 NC_014150.1 KEGG: bhy:BHWA1_01529 esterase; esterase 1895724 9142640 Bmur_1647 Brachyspira murdochii DSM 12563 esterase YP_003633932.1 1894822 R 526224 CDS YP_003633933.1 296126681 9142641 complement(1895741..1896409) 1 NC_014150.1 KEGG: bhy:BHWA1_01530 hypothetical protein; hypothetical protein 1896409 9142641 Bmur_1648 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633933.1 1895741 R 526224 CDS YP_003633934.1 296126682 9142642 complement(1896411..1897685) 1 NC_014150.1 KEGG: bhy:BHWA1_01531 hypothetical protein; hypothetical protein 1897685 9142642 Bmur_1649 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633934.1 1896411 R 526224 CDS YP_003633935.1 296126683 9142643 1897967..1898710 1 NC_014150.1 PFAM: protein of unknown function DUF28; KEGG: bhy:BHWA1_01533 hypothetical protein; hypothetical protein 1898710 9142643 Bmur_1650 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633935.1 1897967 D 526224 CDS YP_003633936.1 296126684 9142644 1898728..1899201 1 NC_014150.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: bhy:BHWA1_01534 crossover junction endodeoxyribonuclease; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1899201 9142644 Bmur_1651 Brachyspira murdochii DSM 12563 crossover junction endodeoxyribonuclease RuvC YP_003633936.1 1898728 D 526224 CDS YP_003633937.1 296126685 9142645 1899880..1901730 1 NC_014150.1 KEGG: bhy:BHWA1_01637 tRNA uridine 5- carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A 1901730 9142645 Bmur_1652 Brachyspira murdochii DSM 12563 glucose inhibited division protein A YP_003633937.1 1899880 D 526224 CDS YP_003633938.1 296126686 9142646 1902241..1904517 1 NC_014150.1 PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; KEGG: bhy:BHWA1_01633 TPR domain-containing protein; hypothetical protein 1904517 9142646 Bmur_1653 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633938.1 1902241 D 526224 CDS YP_003633939.1 296126687 9142647 1905060..1905647 1 NC_014150.1 KEGG: bhy:BHWA1_02073 hypothetical protein; hypothetical protein 1905647 9142647 Bmur_1654 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633939.1 1905060 D 526224 CDS YP_003633940.1 296126688 9142649 complement(1906213..1907667) 1 NC_014150.1 TIGRFAM: metal dependent phophohydrolase; KEGG: bhy:BHWA1_02074 hypothetical protein; metal dependent phosphohydrolase 1907667 9142649 Bmur_1655 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003633940.1 1906213 R 526224 CDS YP_003633941.1 296126689 9142650 complement(1907743..1908117) 1 NC_014150.1 PFAM: protein of unknown function UPF0153; KEGG: bhy:BHWA1_02075 hypothetical protein; hypothetical protein 1908117 9142650 Bmur_1656 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633941.1 1907743 R 526224 CDS YP_003633942.1 296126690 9142651 complement(1908169..1910811) 1 NC_014150.1 KEGG: bhy:BHWA1_02076 hypothetical protein; hypothetical protein 1910811 9142651 Bmur_1657 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633942.1 1908169 R 526224 CDS YP_003633943.1 296126691 9142652 complement(1910816..1911556) 1 NC_014150.1 KEGG: bhy:BHWA1_02077 hypothetical protein; hypothetical protein 1911556 9142652 Bmur_1658 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633943.1 1910816 R 526224 CDS YP_003633944.1 296126692 9142654 1914135..1914461 1 NC_014150.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_02096 cupin 2, conserved barrel domain protein; cupin 1914461 9142654 Bmur_1659 Brachyspira murdochii DSM 12563 cupin YP_003633944.1 1914135 D 526224 CDS YP_003633945.1 296126693 9142655 1914468..1915331 1 NC_014150.1 TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; KEGG: bhy:BHWA1_02097 modification methylase, HemK family; protein-(glutamine-N5) methyltransferase 1915331 9142655 Bmur_1660 Brachyspira murdochii DSM 12563 protein-(glutamine-N5) methyltransferase YP_003633945.1 1914468 D 526224 CDS YP_003633946.1 296126694 9142656 1915537..1916307 1 NC_014150.1 KEGG: bhy:BHWA1_02099 hydrolase (HAD superfamily); TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; HAD-superfamily hydrolase 1916307 9142656 Bmur_1661 Brachyspira murdochii DSM 12563 HAD-superfamily hydrolase YP_003633946.1 1915537 D 526224 CDS YP_003633947.1 296126695 9142657 complement(1916713..1917705) 1 NC_014150.1 KEGG: bhy:BHWA1_01537 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 1917705 9142657 Bmur_1662 Brachyspira murdochii DSM 12563 UDP-glucose 4-epimerase YP_003633947.1 1916713 R 526224 CDS YP_003633948.1 296126696 9142658 complement(1918094..1919896) 1 NC_014150.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: bhy:BHWA1_01526 hypothetical protein; Lipoprotein LpqB, GerMN domain-containing protein 1919896 9142658 Bmur_1663 Brachyspira murdochii DSM 12563 Lipoprotein LpqB, GerMN domain-containing protein YP_003633948.1 1918094 R 526224 CDS YP_003633949.1 296126697 9142659 complement(1920182..1921216) 1 NC_014150.1 KEGG: bhy:BHWA1_01436 SpsE, sialic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; N-acylneuraminate-9-phosphate synthase 1921216 9142659 Bmur_1664 Brachyspira murdochii DSM 12563 N-acylneuraminate-9-phosphate synthase YP_003633949.1 1920182 R 526224 CDS YP_003633950.1 296126698 9142661 complement(1921522..1923843) 1 NC_014150.1 PFAM: protein of unknown function DUF214; KEGG: bhy:BHWA1_01433 permease; hypothetical protein 1923843 9142661 Bmur_1665 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633950.1 1921522 R 526224 CDS YP_003633951.1 296126699 9142662 complement(1923866..1924573) 1 NC_014150.1 KEGG: bhy:BHWA1_01432 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1924573 9142662 Bmur_1666 Brachyspira murdochii DSM 12563 ABC transporter YP_003633951.1 1923866 R 526224 CDS YP_003633952.1 296126700 9142663 complement(1924603..1925799) 1 NC_014150.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: bhy:BHWA1_01431 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 1925799 9142663 Bmur_1667 Brachyspira murdochii DSM 12563 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_003633952.1 1924603 R 526224 CDS YP_003633953.1 296126701 9142664 1926222..1927175 1 NC_014150.1 PFAM: PhoH family protein; KEGG: bhy:BHWA1_01430 phosphate starvation- inducible (PhoH)-like protein; PhoH family protein 1927175 9142664 Bmur_1668 Brachyspira murdochii DSM 12563 PhoH family protein YP_003633953.1 1926222 D 526224 CDS YP_003633954.1 296126702 9142665 1927210..1929681 1 NC_014150.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bhy:BHWA1_01429 metal-dependant phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1929681 9142665 Bmur_1669 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003633954.1 1927210 D 526224 CDS YP_003633955.1 296126703 9142666 1929681..1930118 1 NC_014150.1 PFAM: protein of unknown function UPF0054; KEGG: bhy:BHWA1_01428 metal-dependent hydrolase; hypothetical protein 1930118 9142666 Bmur_1670 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633955.1 1929681 D 526224 CDS YP_003633956.1 296126704 9142667 1930132..1930953 1 NC_014150.1 PFAM: CBS domain containing protein; transporter- associated region; KEGG: bhy:BHWA1_01427 hemolysin C; hypothetical protein 1930953 9142667 Bmur_1671 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633956.1 1930132 D 526224 CDS YP_003633957.1 296126705 9142668 1931253..1932935 1 NC_014150.1 KEGG: bhy:BHWA1_01661 hypothetical protein; hypothetical protein 1932935 9142668 Bmur_1672 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633957.1 1931253 D 526224 CDS YP_003633958.1 296126706 9142669 complement(1934197..1935321) 1 NC_014150.1 PFAM: integrase; integrase domain protein SAM domain protein; KEGG: coc:Coch_1556 integrase; integrase 1935321 9142669 Bmur_1673 Brachyspira murdochii DSM 12563 integrase YP_003633958.1 1934197 R 526224 CDS YP_003633959.1 296126707 9142670 complement(1935556..1935780) 1 NC_014150.1 KEGG: ote:Oter_2697 hypothetical protein; hypothetical protein 1935780 9142670 Bmur_1674 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633959.1 1935556 R 526224 CDS YP_003633960.1 296126708 9142671 complement(1935930..1936139) 1 NC_014150.1 KEGG: crp:CRP_182 hypothetical protein; hypothetical protein 1936139 9142671 Bmur_1675 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633960.1 1935930 R 526224 CDS YP_003633961.1 296126709 9142672 complement(1936154..1938037) 1 NC_014150.1 KEGG: bhy:BHWA1_01851 Hvp 101 VSH-1 tail protein; hypothetical protein 1938037 9142672 Bmur_1676 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633961.1 1936154 R 526224 CDS YP_003633962.1 296126710 9142673 complement(1938119..1938658) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1938658 9142673 Bmur_1677 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633962.1 1938119 R 526224 CDS YP_003633963.1 296126711 9142674 complement(1938796..1939233) 1 NC_014150.1 KEGG: viral A-type inclusion protein; hypothetical protein 1939233 9142674 Bmur_1678 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633963.1 1938796 R 526224 CDS YP_003633964.1 296126712 9142675 complement(1939235..1939828) 1 NC_014150.1 PFAM: glycoside hydrolase 19; KEGG: bhy:BHWA1_01853 Lys - endolysin; glycoside hydrolase; glycoside hydrolase 19 1939828 9142675 Bmur_1679 Brachyspira murdochii DSM 12563 glycoside hydrolase 19 YP_003633964.1 1939235 R 526224 CDS YP_003633965.1 296126713 9142676 complement(1939832..1940176) 1 NC_014150.1 KEGG: pmx:PERMA_1019 zinc ribbon domain family; hypothetical protein 1940176 9142676 Bmur_1680 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633965.1 1939832 R 526224 CDS YP_003633966.1 296126714 9142677 complement(1940250..1940639) 1 NC_014150.1 PFAM: Sigma-70 region 4 type 2; KEGG: bhy:BHWA1_00983 hypothetical protein; response regulator receiver protein 1940639 9142677 Bmur_1681 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003633966.1 1940250 R 526224 CDS YP_003633967.1 296126715 9142679 complement(1940847..1942790) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1942790 9142679 Bmur_1683 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633967.1 1940847 R 526224 CDS YP_003633968.1 296126716 9142680 complement(1942803..1943921) 1 NC_014150.1 KEGG: mmi:MMAR_2102 PE-PGRS family protein; hypothetical protein 1943921 9142680 Bmur_1684 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633968.1 1942803 R 526224 CDS YP_003633969.1 296126717 9142681 complement(1943924..1944376) 1 NC_014150.1 KEGG: bhy:BHWA1_01147 hypothetical protein; hypothetical protein 1944376 9142681 Bmur_1685 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633969.1 1943924 R 526224 CDS YP_003633970.1 296126718 9142682 complement(1944376..1945272) 1 NC_014150.1 KEGG: mmy:MSC_0285 prolipoprotein; hypothetical protein 1945272 9142682 Bmur_1686 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633970.1 1944376 R 526224 CDS YP_003633971.1 296126719 9142683 complement(1945269..1948739) 1 NC_014150.1 KEGG: hau:Haur_1369 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 1948739 9142683 Bmur_1687 Brachyspira murdochii DSM 12563 phage tail tape measure protein, TP901 family YP_003633971.1 1945269 R 526224 CDS YP_003633972.1 296126720 9142684 complement(1948829..1949017) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1949017 9142684 Bmur_1688 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633972.1 1948829 R 526224 CDS YP_003633973.1 296126721 9142685 complement(1949083..1949430) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1949430 9142685 Bmur_1689 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633973.1 1949083 R 526224 CDS YP_003633974.1 296126722 9142686 complement(1949442..1950845) 1 NC_014150.1 KEGG: mac:MA3808 hypothetical protein; hypothetical protein 1950845 9142686 Bmur_1690 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633974.1 1949442 R 526224 CDS YP_003633975.1 296126723 9142687 complement(1950880..1951251) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 1951251 9142687 Bmur_1691 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633975.1 1950880 R 526224 CDS YP_003633976.1 296126724 9142688 complement(1951263..1951721) 1 NC_014150.1 TIGRFAM: phage protein, HK97 gp10 family; KEGG: ATP-dependent RNA helicase; phage protein, HK97 gp10 family 1951721 9142688 Bmur_1692 Brachyspira murdochii DSM 12563 phage protein, HK97 gp10 family YP_003633976.1 1951263 R 526224 CDS YP_003633977.1 296126725 9142689 complement(1951723..1952076) 1 NC_014150.1 TIGRFAM: phage head-tail adaptor; KEGG: cby:CLM_3411 DNA polymerase I; phage head-tail adaptor 1952076 9142689 Bmur_1693 Brachyspira murdochii DSM 12563 phage head-tail adaptor YP_003633977.1 1951723 R 526224 CDS YP_003633978.1 296126726 9142690 complement(1952144..1952584) 1 NC_014150.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: rsp:RSP_6247 phage-related protein, DNA packing; phage protein 1952584 9142690 Bmur_1694 Brachyspira murdochii DSM 12563 phage protein YP_003633978.1 1952144 R 526224 CDS YP_003633979.1 296126727 9142691 complement(1952609..1953892) 1 NC_014150.1 KEGG: lga:LGAS_1485 phage phi-C31 GP36 major capsid- like protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; phage major capsid protein, HK97 family 1953892 9142691 Bmur_1695 Brachyspira murdochii DSM 12563 phage major capsid protein, HK97 family YP_003633979.1 1952609 R 526224 CDS YP_003633980.1 296126728 9142692 complement(1953912..1954574) 1 NC_014150.1 KEGG: efa:EF2821 prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; phage prohead protease, HK97 family 1954574 9142692 Bmur_1696 Brachyspira murdochii DSM 12563 phage prohead protease, HK97 family YP_003633980.1 1953912 R 526224 CDS YP_003633981.1 296126729 9142693 complement(1954561..1955838) 1 NC_014150.1 KEGG: det:DET1087 HK97 family portal protein , TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family 1955838 9142693 Bmur_1697 Brachyspira murdochii DSM 12563 phage portal protein, HK97 family YP_003633981.1 1954561 R 526224 CDS YP_003633982.1 296126730 9142694 1955968..1956366 1 NC_014150.1 KEGG: pmr:PMI0923 phage terminase, small subunit; phage terminase small subunit 1956366 9142694 Bmur_1698 Brachyspira murdochii DSM 12563 phage terminase small subunit YP_003633982.1 1955968 D 526224 CDS YP_003633983.1 296126731 9142695 1956375..1958147 1 NC_014150.1 PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase; terminase 1958147 9142695 Bmur_1699 Brachyspira murdochii DSM 12563 terminase YP_003633983.1 1956375 D 526224 CDS YP_003633984.1 296126732 9142696 1958657..1958863 1 NC_014150.1 PFAM: Protein of unknown function DUF1778; KEGG: nmu:Nmul_B2796 mobilization protein; hypothetical protein 1958863 9142696 Bmur_1700 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633984.1 1958657 D 526224 CDS YP_003633985.1 296126733 9142697 1958927..1960945 1 NC_014150.1 KEGG: fps:FP1554 hypothetical protein; hypothetical protein 1960945 9142697 Bmur_1701 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633985.1 1958927 D 526224 CDS YP_003633986.1 296126734 9142698 1960992..1962851 1 NC_014150.1 KEGG: bcm:Bcenmc03_7078 hypothetical protein; hypothetical protein 1962851 9142698 Bmur_1702 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633986.1 1960992 D 526224 CDS YP_003633987.1 296126735 9142699 complement(1962924..1963052) 1 NC_014150.1 KEGG: hut:Huta_2286 hypothetical protein; hypothetical protein 1963052 9142699 Bmur_1703 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633987.1 1962924 R 526224 CDS YP_003633988.1 296126736 9142700 complement(1963052..1963999) 1 NC_014150.1 PFAM: integrase domain protein SAM domain protein; integrase; KEGG: tme:Tmel_0169 phage integrase; integrase domain-containing protein SAM domain-containing protein 1963999 9142700 Bmur_1704 Brachyspira murdochii DSM 12563 integrase domain-containing protein SAM domain-containing protein YP_003633988.1 1963052 R 526224 CDS YP_003633989.1 296126737 9142701 complement(1964078..1964485) 1 NC_014150.1 KEGG: bhy:BHWA1_01032 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 1964485 9142701 Bmur_1705 Brachyspira murdochii DSM 12563 single-strand binding protein YP_003633989.1 1964078 R 526224 CDS YP_003633990.1 296126738 9142702 complement(1964512..1965009) 1 NC_014150.1 KEGG: bpy:Bphyt_7293 hypothetical protein; hypothetical protein 1965009 9142702 Bmur_1706 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633990.1 1964512 R 526224 CDS YP_003633991.1 296126739 9142703 complement(1965032..1965199) 1 NC_014150.1 hypothetical protein 1965199 9142703 Bmur_1707 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633991.1 1965032 R 526224 CDS YP_003633992.1 296126740 9142704 complement(1965196..1965441) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1965441 9142704 Bmur_1708 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633992.1 1965196 R 526224 CDS YP_003633993.1 296126741 9142705 complement(1965438..1965674) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1965674 9142705 Bmur_1709 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633993.1 1965438 R 526224 CDS YP_003633994.1 296126742 9142706 complement(1965678..1965878) 1 NC_014150.1 KEGG: predicted protein; hypothetical protein 1965878 9142706 Bmur_1710 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633994.1 1965678 R 526224 CDS YP_003633995.1 296126743 9142707 complement(1965882..1966076) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1966076 9142707 Bmur_1711 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633995.1 1965882 R 526224 CDS YP_003633996.1 296126744 9142708 complement(1966107..1966826) 1 NC_014150.1 KEGG: rme:Rmet_6243 hypothetical protein; hypothetical protein 1966826 9142708 Bmur_1712 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633996.1 1966107 R 526224 CDS YP_003633997.1 296126745 9142709 complement(1966823..1967248) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1967248 9142709 Bmur_1713 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633997.1 1966823 R 526224 CDS YP_003633998.1 296126746 9142710 complement(1967202..1968056) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 1968056 9142710 Bmur_1714 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633998.1 1967202 R 526224 CDS YP_003633999.1 296126747 9142711 complement(1968060..1968281) 1 NC_014150.1 KEGG: CG17514 gene product from transcript CG17514- RA; hypothetical protein 1968281 9142711 Bmur_1715 Brachyspira murdochii DSM 12563 hypothetical protein YP_003633999.1 1968060 R 526224 CDS YP_003634000.1 296126748 9142712 complement(1968294..1968563) 1 NC_014150.1 KEGG: cth:Cthe_1731 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 1968563 9142712 Bmur_1716 Brachyspira murdochii DSM 12563 HNH endonuclease YP_003634000.1 1968294 R 526224 CDS YP_003634001.1 296126749 9142713 complement(1968626..1968916) 1 NC_014150.1 KEGG: cbi:CLJ_B2480 hypothetical protein; hypothetical protein 1968916 9142713 Bmur_1717 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634001.1 1968626 R 526224 CDS YP_003634002.1 296126750 9142714 complement(1968988..1969263) 1 NC_014150.1 KEGG: bth:BT_2588 hypothetical protein; hypothetical protein 1969263 9142714 Bmur_1718 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634002.1 1968988 R 526224 CDS YP_003634003.1 296126751 9142715 complement(1969275..1969535) 1 NC_014150.1 KEGG: cbi:CLJ_B1169 sensor histidine kinase; sensor histidine kinase 1969535 9142715 Bmur_1719 Brachyspira murdochii DSM 12563 sensor histidine kinase YP_003634003.1 1969275 R 526224 CDS YP_003634004.1 296126752 9142716 complement(1969607..1970053) 1 NC_014150.1 KEGG: gfo:GFO_3392 hypothetical protein; hypothetical protein 1970053 9142716 Bmur_1720 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634004.1 1969607 R 526224 CDS YP_003634005.1 296126753 9142717 complement(1970071..1970907) 1 NC_014150.1 SMART: AAA ATPase; KEGG: ayw:AYWB_001 chromosomal replication initiation protein; hypothetical protein 1970907 9142717 Bmur_1721 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634005.1 1970071 R 526224 CDS YP_003634006.1 296126754 9142718 complement(1970873..1971811) 1 NC_014150.1 KEGG: tpd:Teth39_0039 hypothetical protein; hypothetical protein 1971811 9142718 Bmur_1722 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634006.1 1970873 R 526224 CDS YP_003634007.1 296126755 9142719 complement(1971801..1972169) 1 NC_014150.1 KEGG: cbk:CLL_A0880 calcium-transporting ATPase; hypothetical protein 1972169 9142719 Bmur_1723 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634007.1 1971801 R 526224 CDS YP_003634008.1 296126756 9142721 complement(1973632..1974588) 1 NC_014150.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bhy:BHWA1_02068 D-isomer specific 2- hydroxyacid dehydrogenase, catalytic domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1974588 9142721 Bmur_1725 Brachyspira murdochii DSM 12563 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_003634008.1 1973632 R 526224 CDS YP_003634009.1 296126757 9142722 1975033..1976394 1 NC_014150.1 PFAM: Inner membrane CreD family protein; KEGG: bhy:BHWA1_01610 inner membrane protein; Inner membrane CreD family protein 1976394 9142722 Bmur_1726 Brachyspira murdochii DSM 12563 Inner membrane CreD family protein YP_003634009.1 1975033 D 526224 CDS YP_003634010.1 296126758 9142723 complement(1976738..1977646) 1 NC_014150.1 KEGG: bhy:BHWA1_01612 hypothetical protein; hypothetical protein 1977646 9142723 Bmur_1727 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634010.1 1976738 R 526224 CDS YP_003634011.1 296126759 9142724 1977779..1978426 1 NC_014150.1 TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; KEGG: bhy:BHWA1_01665 tRNA (guanine-N(7)-)- methyltransferase; PFAM: methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1978426 9142724 Bmur_1728 Brachyspira murdochii DSM 12563 tRNA (guanine-N(7)-)-methyltransferase YP_003634011.1 1977779 D 526224 CDS YP_003634012.1 296126760 9142725 1978446..1979432 1 NC_014150.1 KEGG: bhy:BHWA1_01666 hypothetical protein; hypothetical protein 1979432 9142725 Bmur_1729 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634012.1 1978446 D 526224 CDS YP_003634013.1 296126761 9142726 1979644..1979838 1 NC_014150.1 KEGG: bhy:BHWA1_01667 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 1979838 9142726 Bmur_1730 Brachyspira murdochii DSM 12563 50S ribosomal protein L32 YP_003634013.1 1979644 D 526224 CDS YP_003634014.1 296126762 9142727 1979867..1980886 1 NC_014150.1 KEGG: bhy:BHWA1_01668 fatty acid/phospholipid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX 1980886 9142727 Bmur_1731 Brachyspira murdochii DSM 12563 fatty acid/phospholipid synthesis protein PlsX YP_003634014.1 1979867 D 526224 CDS YP_003634015.1 296126763 9142728 1980929..1981783 1 NC_014150.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bhy:BHWA1_01669 3-oxoacyl-(acyl-carrier- protein) synthase III; 3-oxoacyl-ACP synthase 1981783 9142728 Bmur_1732 Brachyspira murdochii DSM 12563 3-oxoacyl-ACP synthase YP_003634015.1 1980929 D 526224 CDS YP_003634016.1 296126764 9142729 1981846..1983153 1 NC_014150.1 KEGG: bhy:BHWA1_01670 electron transport complex protein; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; RnfABCDGE type electron transport complex subunit C 1983153 9142729 Bmur_1733 Brachyspira murdochii DSM 12563 RnfABCDGE type electron transport complex subunit C YP_003634016.1 1981846 D 526224 CDS YP_003634017.1 296126765 9142730 1983169..1984254 1 NC_014150.1 KEGG: bhy:BHWA1_01671 electron transport complex; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; RnfABCDGE type electron transport complex subunit D 1984254 9142730 Bmur_1734 Brachyspira murdochii DSM 12563 RnfABCDGE type electron transport complex subunit D YP_003634017.1 1983169 D 526224 CDS YP_003634018.1 296126766 9142731 1984254..1984826 1 NC_014150.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: bhy:BHWA1_01672 electron transport complex; SMART: FMN-binding domain protein; RnfABCDGE type electron transport complex subunit G 1984826 9142731 Bmur_1735 Brachyspira murdochii DSM 12563 RnfABCDGE type electron transport complex subunit G YP_003634018.1 1984254 D 526224 CDS YP_003634019.1 296126767 9142732 complement(1985030..1985881) 1 NC_014150.1 KEGG: bhy:BHWA1_00229 hypothetical protein; hypothetical protein 1985881 9142732 Bmur_1736 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634019.1 1985030 R 526224 CDS YP_003634020.1 296126768 9142733 complement(1986172..1986552) 1 NC_014150.1 KEGG: bhy:BHWA1_01581 hypothetical protein; hypothetical protein 1986552 9142733 Bmur_1737 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634020.1 1986172 R 526224 CDS YP_003634021.1 296126769 9142734 1986946..1988160 1 NC_014150.1 KEGG: bhy:BHWA1_01582 hypothetical protein; hypothetical protein 1988160 9142734 Bmur_1738 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634021.1 1986946 D 526224 CDS YP_003634022.1 296126770 9142735 1988202..1988618 1 NC_014150.1 PFAM: protein of unknown function UPF0047; KEGG: bhy:BHWA1_02101 hypothetical protein; hypothetical protein 1988618 9142735 Bmur_1739 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634022.1 1988202 D 526224 CDS YP_003634023.1 296126771 9142736 complement(1988844..1989257) 1 NC_014150.1 KEGG: bhy:BHWA1_02098 hypothetical protein; hypothetical protein 1989257 9142736 Bmur_1740 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634023.1 1988844 R 526224 CDS YP_003634024.1 296126772 9142737 complement(1989309..1991603) 1 NC_014150.1 PFAM: metallophosphoesterase; tRNA ligase, adenylyltransferase, fungi; KEGG: bpu:BPUM_1677 phosphoprotein phosphatase; metallophosphoesterase 1991603 9142737 Bmur_1741 Brachyspira murdochii DSM 12563 metallophosphoesterase YP_003634024.1 1989309 R 526224 CDS YP_003634025.1 296126773 9142738 complement(1991639..1992139) 1 NC_014150.1 PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01604 NUDIX hydrolase; NUDIX hydrolase 1992139 9142738 Bmur_1742 Brachyspira murdochii DSM 12563 NUDIX hydrolase YP_003634025.1 1991639 R 526224 CDS YP_003634026.1 296126774 9142739 complement(1992254..1993060) 1 NC_014150.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: bhy:BHWA1_01605 D-aminopeptidase; peptidase M55 D-aminopeptidase 1993060 9142739 Bmur_1743 Brachyspira murdochii DSM 12563 peptidase M55 D-aminopeptidase YP_003634026.1 1992254 R 526224 CDS YP_003634027.1 296126775 9142740 1993195..1995924 1 NC_014150.1 KEGG: syp:SYNPCC7002_A2132 DNA methyltransferase; DNA methyltransferase 1995924 9142740 Bmur_1744 Brachyspira murdochii DSM 12563 DNA methyltransferase YP_003634027.1 1993195 D 526224 CDS YP_003634028.1 296126776 9142741 1996106..1997077 1 NC_014150.1 KEGG: nmn:NMCC_0685 hypothetical protein; hypothetical protein 1997077 9142741 Bmur_1745 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634028.1 1996106 D 526224 CDS YP_003634029.1 296126777 9142742 complement(1997161..1997637) 1 NC_014150.1 KEGG: cch:Cag_0310 hypothetical protein; PFAM: PilT protein domain protein; SMART: nucleotide binding protein PINc; twitching motility protein PilT 1997637 9142742 Bmur_1746 Brachyspira murdochii DSM 12563 twitching motility protein PilT YP_003634029.1 1997161 R 526224 CDS YP_003634030.1 296126778 9142743 complement(1997638..1998783) 1 NC_014150.1 KEGG: cch:Cag_0309 hypothetical protein; PFAM: protein of unknown function DUF955; SMART: helix-turn-helix domain protein; hypothetical protein 1998783 9142743 Bmur_1747 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634030.1 1997638 R 526224 CDS YP_003634031.1 296126779 9142744 complement(1998949..2000031) 1 NC_014150.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: bhy:BHWA1_01648 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 2000031 9142744 Bmur_1748 Brachyspira murdochii DSM 12563 aspartate-semialdehyde dehydrogenase YP_003634031.1 1998949 R 526224 CDS YP_003634032.1 296126780 9142745 2000555..2001127 1 NC_014150.1 KEGG: bhy:BHWA1_01647 periplasmic protein; hypothetical protein 2001127 9142745 Bmur_1749 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634032.1 2000555 D 526224 CDS YP_003634033.1 296126781 9142746 2001177..2001428 1 NC_014150.1 KEGG: bhy:BHWA1_01646 periplasmic protein; hypothetical protein 2001428 9142746 Bmur_1750 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634033.1 2001177 D 526224 CDS YP_003634034.1 296126782 9142747 complement(2001740..2003080) 1 NC_014150.1 KEGG: bhy:BHWA1_02060 adenosylmethionine--8-amino-7- oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2003080 9142747 Bmur_1751 Brachyspira murdochii DSM 12563 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_003634034.1 2001740 R 526224 CDS YP_003634035.1 296126783 9142748 complement(2003187..2003855) 1 NC_014150.1 KEGG: bhy:BHWA1_02061 dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase 2003855 9142748 Bmur_1752 Brachyspira murdochii DSM 12563 dethiobiotin synthase YP_003634035.1 2003187 R 526224 CDS YP_003634036.1 296126784 9142749 complement(2003872..2004873) 1 NC_014150.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: bhy:BHWA1_02062 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; biotin synthase 2004873 9142749 Bmur_1753 Brachyspira murdochii DSM 12563 biotin synthase YP_003634036.1 2003872 R 526224 CDS YP_003634037.1 296126785 9142750 complement(2004890..2005873) 1 NC_014150.1 KEGG: bhy:BHWA1_02063 biotin--protein ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn- helix type 11 domain protein; biotin--acetyl-CoA-carboxylase ligase 2005873 9142750 Bmur_1754 Brachyspira murdochii DSM 12563 biotin--acetyl-CoA-carboxylase ligase YP_003634037.1 2004890 R 526224 CDS YP_003634038.1 296126786 9142752 complement(2007013..2008140) 1 NC_014150.1 TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; KEGG: bhy:BHWA1_02045 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl- CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 2008140 9142752 Bmur_1756 Brachyspira murdochii DSM 12563 sodium ion-translocating decarboxylase subunit beta YP_003634038.1 2007013 R 526224 CDS YP_003634039.1 296126787 9142753 complement(2008157..2008561) 1 NC_014150.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bhy:BHWA1_02044 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; biotin/lipoyl attachment domain-containing protein 2008561 9142753 Bmur_1757 Brachyspira murdochii DSM 12563 biotin/lipoyl attachment domain-containing protein YP_003634039.1 2008157 R 526224 CDS YP_003634040.1 296126788 9142754 complement(2008657..2008974) 1 NC_014150.1 PFAM: sodium pump decarboxylase gamma subunit; KEGG: bhy:BHWA1_02043 sodium pump decarboxylase, gamma subunit; sodium pump decarboxylase gamma subunit 2008974 9142754 Bmur_1758 Brachyspira murdochii DSM 12563 sodium pump decarboxylase gamma subunit YP_003634040.1 2008657 R 526224 CDS YP_003634041.1 296126789 9142755 complement(2009007..2010551) 1 NC_014150.1 PFAM: carboxyl transferase; KEGG: bhy:BHWA1_02042 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); carboxyl transferase 2010551 9142755 Bmur_1759 Brachyspira murdochii DSM 12563 carboxyl transferase YP_003634041.1 2009007 R 526224 CDS YP_003634042.1 296126790 9142756 2010854..2011498 1 NC_014150.1 KEGG: bhy:BHWA1_02041 hypothetical protein; hypothetical protein 2011498 9142756 Bmur_1760 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634042.1 2010854 D 526224 CDS YP_003634043.1 296126791 9142757 2011917..2013101 1 NC_014150.1 TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_01389 metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2013101 9142757 Bmur_1761 Brachyspira murdochii DSM 12563 amidohydrolase YP_003634043.1 2011917 D 526224 CDS YP_003634044.1 296126792 9142758 2013173..2014054 1 NC_014150.1 KEGG: bhy:BHWA1_01388 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 2014054 9142758 Bmur_1762 Brachyspira murdochii DSM 12563 dihydrodipicolinate synthase YP_003634044.1 2013173 D 526224 CDS YP_003634045.1 296126793 9142759 2014088..2014783 1 NC_014150.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: bhy:BHWA1_01387 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 2014783 9142759 Bmur_1763 Brachyspira murdochii DSM 12563 dihydrodipicolinate reductase YP_003634045.1 2014088 D 526224 CDS YP_003634046.1 296126794 9142760 2014849..2015562 1 NC_014150.1 KEGG: bhy:BHWA1_01386 tetrahydrodipicolinate succinylase; TIGRFAM:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase hexapeptide repeat containing protein; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2015562 9142760 Bmur_1764 Brachyspira murdochii DSM 12563 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_003634046.1 2014849 D 526224 CDS YP_003634047.1 296126795 9142761 2015722..2016363 1 NC_014150.1 KEGG: bhy:BHWA1_02058 hypothetical protein; hypothetical protein 2016363 9142761 Bmur_1765 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634047.1 2015722 D 526224 CDS YP_003634048.1 296126796 9142762 2016642..2017775 1 NC_014150.1 PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_01385 aminotransferase A; class I and II aminotransferase 2017775 9142762 Bmur_1766 Brachyspira murdochii DSM 12563 class I and II aminotransferase YP_003634048.1 2016642 D 526224 CDS YP_003634049.1 296126797 9142764 complement(2019029..2021293) 1 NC_014150.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bhy:BHWA1_01938 pyruvate ferredoxin oxireductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2021293 9142764 Bmur_1768 Brachyspira murdochii DSM 12563 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_003634049.1 2019029 R 526224 CDS YP_003634050.1 296126798 9142765 complement(2021308..2022342) 1 NC_014150.1 KEGG: bhy:BHWA1_01937 pyruvate oxireductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate/ketoisovalerate oxidoreductase; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; pyruvate/ketoisovalerate oxidoreductase subunit gamma 2022342 9142765 Bmur_1769 Brachyspira murdochii DSM 12563 pyruvate/ketoisovalerate oxidoreductase subunit gamma YP_003634050.1 2021308 R 526224 CDS YP_003634051.1 296126799 9142766 2022639..2024483 1 NC_014150.1 KEGG: bhy:BHWA1_01935 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2024483 9142766 Bmur_1770 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634051.1 2022639 D 526224 CDS YP_003634052.1 296126800 9142767 2024703..2025815 1 NC_014150.1 KEGG: bhy:BHWA1_01934 hypothetical protein; hypothetical protein 2025815 9142767 Bmur_1771 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634052.1 2024703 D 526224 CDS YP_003634053.1 296126801 9142768 2025888..2026292 1 NC_014150.1 KEGG: bhy:BHWA1_01933 hypothetical protein; hypothetical protein 2026292 9142768 Bmur_1772 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634053.1 2025888 D 526224 CDS YP_003634054.1 296126802 9142769 2026433..2026858 1 NC_014150.1 KEGG: bhy:BHWA1_01607 hypothetical protein; hypothetical protein 2026858 9142769 Bmur_1773 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634054.1 2026433 D 526224 CDS YP_003634055.1 296126803 9142770 complement(2026945..2027469) 1 NC_014150.1 KEGG: bhy:BHWA1_01608 hypothetical protein; hypothetical protein 2027469 9142770 Bmur_1774 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634055.1 2026945 R 526224 CDS YP_003634056.1 296126804 9142771 2027650..2028636 1 NC_014150.1 PFAM: aldo/keto reductase; KEGG: bhy:BHWA1_01609 aldo/keto reductase; aldo/keto reductase 2028636 9142771 Bmur_1775 Brachyspira murdochii DSM 12563 aldo/keto reductase YP_003634056.1 2027650 D 526224 CDS YP_003634057.1 296126805 9142772 2028886..2029812 1 NC_014150.1 KEGG: bhy:BHWA1_01536 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 2029812 9142772 Bmur_1776 Brachyspira murdochii DSM 12563 1-phosphofructokinase YP_003634057.1 2028886 D 526224 CDS YP_003634058.1 296126806 9142773 2030008..2030709 1 NC_014150.1 KEGG: bhy:BHWA1_01535 hypothetical protein; hypothetical protein 2030709 9142773 Bmur_1777 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634058.1 2030008 D 526224 CDS YP_003634059.1 296126807 9142774 complement(2030795..2032153) 1 NC_014150.1 KEGG: bhy:BHWA1_01527 hypothetical protein; PFAM: hypothetical protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide repeat; hypothetical protein 2032153 9142774 Bmur_1778 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634059.1 2030795 R 526224 CDS YP_003634060.1 296126808 9142775 complement(2032177..2032461) 1 NC_014150.1 KEGG: bhy:BHWA1_01528 hypothetical protein; hypothetical protein 2032461 9142775 Bmur_1779 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634060.1 2032177 R 526224 CDS YP_003634061.1 296126809 9142776 2032945..2033667 1 NC_014150.1 KEGG: bhy:BHWA1_01515 hypothetical protein; hypothetical protein 2033667 9142776 Bmur_1780 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634061.1 2032945 D 526224 CDS YP_003634062.1 296126810 9142777 2033732..2034982 1 NC_014150.1 KEGG: bhy:BHWA1_01460 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 2034982 9142777 Bmur_1781 Brachyspira murdochii DSM 12563 ABC transporter ATP-binding protein YP_003634062.1 2033732 D 526224 CDS YP_003634063.1 296126811 9142778 2035010..2035570 1 NC_014150.1 KEGG: lba:Lebu_0364 hypothetical protein; hypothetical protein 2035570 9142778 Bmur_1782 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634063.1 2035010 D 526224 CDS YP_003634064.1 296126812 9142779 2035688..2036638 1 NC_014150.1 KEGG: bhy:BHWA1_01514 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2036638 9142779 Bmur_1783 Brachyspira murdochii DSM 12563 prolipoprotein diacylglyceryl transferase YP_003634064.1 2035688 D 526224 CDS YP_003634065.1 296126813 9142780 complement(2036694..2036873) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2036873 9142780 Bmur_1784 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634065.1 2036694 R 526224 CDS YP_003634066.1 296126814 9142781 2037080..2038390 1 NC_014150.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: bhy:BHWA1_01649 integral membrane transport protein; xanthine/uracil/vitamin C permease 2038390 9142781 Bmur_1785 Brachyspira murdochii DSM 12563 xanthine/uracil/vitamin C permease YP_003634066.1 2037080 D 526224 CDS YP_003634067.1 296126815 9142782 complement(2038807..2039259) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2039259 9142782 Bmur_1786 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634067.1 2038807 R 526224 CDS YP_003634068.1 296126816 9142783 2039796..2040947 1 NC_014150.1 TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide- transf erase; KEGG: bhy:BHWA1_01638 phospho-N-acetylmuramoyl- pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 2040947 9142783 Bmur_1787 Brachyspira murdochii DSM 12563 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_003634068.1 2039796 D 526224 CDS YP_003634069.1 296126817 9142784 2041025..2041636 1 NC_014150.1 TIGRFAM: thymidylate kinase; KEGG: bhy:BHWA1_01639 thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 2041636 9142784 Bmur_1788 Brachyspira murdochii DSM 12563 thymidylate kinase YP_003634069.1 2041025 D 526224 CDS YP_003634070.1 296126818 9142785 complement(2041605..2042021) 1 NC_014150.1 KEGG: cts:Ctha_0653 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 2042021 9142785 Bmur_1789 Brachyspira murdochii DSM 12563 single-strand binding protein YP_003634070.1 2041605 R 526224 CDS YP_003634071.1 296126819 9142786 complement(2042778..2043446) 1 NC_014150.1 PFAM: DNA alkylation repair enzyme; KEGG: bhy:BHWA1_01644 DNA alkylation repair enzyme; DNA alkylation repair protein 2043446 9142786 Bmur_1790 Brachyspira murdochii DSM 12563 DNA alkylation repair protein YP_003634071.1 2042778 R 526224 CDS YP_003634072.1 296126820 9142787 complement(2043461..2044465) 1 NC_014150.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bhy:BHWA1_01645 malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase 2044465 9142787 Bmur_1791 Brachyspira murdochii DSM 12563 malate/L-lactate dehydrogenase YP_003634072.1 2043461 R 526224 CDS YP_003634073.1 296126821 9142788 2045342..2046199 1 NC_014150.1 PFAM: flagellin domain protein; KEGG: bhy:BHWA1_01501 flagellar filament core protein flaB2; flagellin domain-containing protein 2046199 9142788 Bmur_1792 Brachyspira murdochii DSM 12563 flagellin domain-containing protein YP_003634073.1 2045342 D 526224 CDS YP_003634074.1 296126822 9142789 2046680..2047312 1 NC_014150.1 PFAM: protein of unknown function DUF1121; KEGG: bhy:BHWA1_01500 hypothetical protein; hypothetical protein 2047312 9142789 Bmur_1793 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634074.1 2046680 D 526224 CDS YP_003634075.1 296126823 9142790 complement(2047394..2051131) 1 NC_014150.1 KEGG: bhy:BHWA1_01509 hypothetical protein; hypothetical protein 2051131 9142790 Bmur_1794 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634075.1 2047394 R 526224 CDS YP_003634076.1 296126824 9142791 2051446..2051925 1 NC_014150.1 KEGG: bhy:BHWA1_01508 hypothetical protein; hypothetical protein 2051925 9142791 Bmur_1795 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634076.1 2051446 D 526224 CDS YP_003634077.1 296126825 9142792 2052381..2053610 1 NC_014150.1 PFAM: Colicin lysis protein; KEGG: hypothetical protein; Colicin lysis protein 2053610 9142792 Bmur_1796 Brachyspira murdochii DSM 12563 Colicin lysis protein YP_003634077.1 2052381 D 526224 CDS YP_003634078.1 296126826 9142793 2053622..2054473 1 NC_014150.1 KEGG: bhy:BHWA1_01349 hypothetical protein; hypothetical protein 2054473 9142793 Bmur_1797 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634078.1 2053622 D 526224 CDS YP_003634079.1 296126827 9142794 complement(2054777..2055412) 1 NC_014150.1 KEGG: bhy:BHWA1_01643 TPR domain-containing protein; PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; hypothetical protein 2055412 9142794 Bmur_1798 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634079.1 2054777 R 526224 CDS YP_003634080.1 296126828 9142795 2055907..2056479 1 NC_014150.1 KEGG: bhy:BHWA1_01507 hypothetical protein; hypothetical protein 2056479 9142795 Bmur_1799 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634080.1 2055907 D 526224 CDS YP_003634081.1 296126829 9142796 complement(2056539..2057165) 1 NC_014150.1 KEGG: bhy:BHWA1_01506 hypothetical protein; hypothetical protein 2057165 9142796 Bmur_1800 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634081.1 2056539 R 526224 CDS YP_003634082.1 296126830 9142797 complement(2057187..2057738) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2057738 9142797 Bmur_1801 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634082.1 2057187 R 526224 CDS YP_003634083.1 296126831 9142798 complement(2058030..2058590) 1 NC_014150.1 KEGG: bhy:BHWA1_01505 hypothetical protein; hypothetical protein 2058590 9142798 Bmur_1802 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634083.1 2058030 R 526224 CDS YP_003634084.1 296126832 9142799 complement(2059097..2060710) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01426 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 2060710 9142799 Bmur_1803 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634084.1 2059097 R 526224 CDS YP_003634085.1 296126833 9142800 2060860..2061549 1 NC_014150.1 SMART: ankyrin; KEGG: bhy:BHWA1_01425 ankyrin repeat-containing protein; ankyrin 2061549 9142800 Bmur_1804 Brachyspira murdochii DSM 12563 ankyrin YP_003634085.1 2060860 D 526224 CDS YP_003634086.1 296126834 9142801 complement(2061649..2063616) 1 NC_014150.1 KEGG: bhy:BHWA1_01375 methyl-accepting chemotaxis protein C; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 2063616 9142801 Bmur_1805 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003634086.1 2061649 R 526224 CDS YP_003634087.1 296126835 9142802 complement(2063753..2064793) 1 NC_014150.1 KEGG: bhy:BHWA1_01374 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase 2064793 9142802 Bmur_1806 Brachyspira murdochii DSM 12563 UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase YP_003634087.1 2063753 R 526224 CDS YP_003634088.1 296126836 9142803 complement(2064881..2065309) 1 NC_014150.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: bhy:BHWA1_01373 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 2065309 9142803 Bmur_1807 Brachyspira murdochii DSM 12563 outer membrane chaperone Skp YP_003634088.1 2064881 R 526224 CDS YP_003634089.1 296126837 9142804 complement(2065364..2067970) 1 NC_014150.1 KEGG: bhy:BHWA1_01372 outer membrane protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; outer membrane protein assembly complex, YaeT protein 2067970 9142804 Bmur_1808 Brachyspira murdochii DSM 12563 outer membrane protein assembly complex, YaeT protein YP_003634089.1 2065364 R 526224 CDS YP_003634090.1 296126838 9142805 complement(2067970..2072418) 1 NC_014150.1 PFAM: protein of unknown function DUF490; KEGG: bhy:BHWA1_01371 hypothetical protein; hypothetical protein 2072418 9142805 Bmur_1809 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634090.1 2067970 R 526224 CDS YP_003634091.1 296126839 9142806 2072658..2073092 1 NC_014150.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_01370 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 2073092 9142806 Bmur_1810 Brachyspira murdochii DSM 12563 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_003634091.1 2072658 D 526224 CDS YP_003634092.1 296126840 9142807 2073346..2074380 1 NC_014150.1 KEGG: bhy:BHWA1_01367 hypothetical protein; hypothetical protein 2074380 9142807 Bmur_1811 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634092.1 2073346 D 526224 CDS YP_003634093.1 296126841 9142808 complement(2074377..2075114) 1 NC_014150.1 PFAM: phosphoribosyltransferase; KEGG: bhy:BHWA1_01366 phosphoribosyltransferace; phosphoribosyltransferase 2075114 9142808 Bmur_1812 Brachyspira murdochii DSM 12563 phosphoribosyltransferase YP_003634093.1 2074377 R 526224 CDS YP_003634094.1 296126842 9142809 complement(2075114..2075905) 1 NC_014150.1 KEGG: bhy:BHWA1_01365 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein 2075905 9142809 Bmur_1813 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634094.1 2075114 R 526224 CDS YP_003634095.1 296126843 9142810 2076588..2077520 1 NC_014150.1 KEGG: bhy:BHWA1_01364 lysophospholipase; lysophospholipase 2077520 9142810 Bmur_1814 Brachyspira murdochii DSM 12563 lysophospholipase YP_003634095.1 2076588 D 526224 CDS YP_003634096.1 296126844 9142811 complement(2077601..2078953) 1 NC_014150.1 KEGG: bhy:BHWA1_01362 cell cycle protein MesJ; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase 2078953 9142811 Bmur_1815 Brachyspira murdochii DSM 12563 tRNA(Ile)-lysidine synthetase YP_003634096.1 2077601 R 526224 CDS YP_003634097.1 296126845 9142812 complement(2078971..2079864) 1 NC_014150.1 PFAM: Domain of unknown function DUF1848; KEGG: bhy:BHWA1_01361 hypothetical protein; hypothetical protein 2079864 9142812 Bmur_1816 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634097.1 2078971 R 526224 CDS YP_003634098.1 296126846 9142813 complement(2079877..2080503) 1 NC_014150.1 SMART: beta-lactamase domain protein; KEGG: bhy:BHWA1_01360 beta-lactamase domain protein; beta-lactamase 2080503 9142813 Bmur_1817 Brachyspira murdochii DSM 12563 beta-lactamase YP_003634098.1 2079877 R 526224 CDS YP_003634099.1 296126847 9142814 complement(2080516..2081322) 1 NC_014150.1 KEGG: bhy:BHWA1_01359 hypothetical protein; hypothetical protein 2081322 9142814 Bmur_1818 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634099.1 2080516 R 526224 CDS YP_003634100.1 296126848 9142815 complement(2081370..2081747) 1 NC_014150.1 KEGG: bhy:BHWA1_01358 hypothetical protein; hypothetical protein 2081747 9142815 Bmur_1819 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634100.1 2081370 R 526224 CDS YP_003634101.1 296126849 9142816 complement(2081765..2081908) 1 NC_014150.1 KEGG: bhy:BHWA1_01357 hypothetical protein; hypothetical protein 2081908 9142816 Bmur_1820 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634101.1 2081765 R 526224 CDS YP_003634102.1 296126850 9142817 complement(2082015..2082464) 1 NC_014150.1 KEGG: bhy:BHWA1_01356 hypothetical protein; hypothetical protein 2082464 9142817 Bmur_1821 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634102.1 2082015 R 526224 CDS YP_003634103.1 296126851 9142818 2082636..2083979 1 NC_014150.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: bhy:BHWA1_01355 MATE efflux family protein; multi antimicrobial extrusion protein MatE 2083979 9142818 Bmur_1822 Brachyspira murdochii DSM 12563 multi antimicrobial extrusion protein MatE YP_003634103.1 2082636 D 526224 CDS YP_003634104.1 296126852 9142819 complement(2084060..2085037) 1 NC_014150.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: bhy:BHWA1_01354 cobalamin biosynthesis protein B; cobalamin biosynthesis protein CbiB 2085037 9142819 Bmur_1823 Brachyspira murdochii DSM 12563 cobalamin biosynthesis protein CbiB YP_003634104.1 2084060 R 526224 CDS YP_003634105.1 296126853 9142820 complement(2085085..2085669) 1 NC_014150.1 KEGG: bhy:BHWA1_01353 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase; SMART: phosphoglycerate mutase; phosphoglycerate mutase 2085669 9142820 Bmur_1824 Brachyspira murdochii DSM 12563 phosphoglycerate mutase YP_003634105.1 2085085 R 526224 CDS YP_003634106.1 296126854 9142821 2086152..2087660 1 NC_014150.1 PFAM: arylsulfotransferase; KEGG: bhy:BHWA1_01792 arylsulfate sulfotransferase; arylsulfotransferase 2087660 9142821 Bmur_1825 Brachyspira murdochii DSM 12563 arylsulfotransferase YP_003634106.1 2086152 D 526224 CDS YP_003634107.1 296126855 9142822 2088012..2090408 1 NC_014150.1 TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: bhy:BHWA1_01352 membrane-bound proton- translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; V-type H(+)-translocating pyrophosphatase 2090408 9142822 Bmur_1826 Brachyspira murdochii DSM 12563 V-type H(+)-translocating pyrophosphatase YP_003634107.1 2088012 D 526224 CDS YP_003634108.1 296126856 9142823 2090553..2091308 1 NC_014150.1 KEGG: bhy:BHWA1_01349 hypothetical protein; hypothetical protein 2091308 9142823 Bmur_1827 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634108.1 2090553 D 526224 CDS YP_003634109.1 296126857 9142824 2091549..2093381 1 NC_014150.1 KEGG: bhy:BHWA1_01350 methyl-accepting chemotaxis protein A; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2093381 9142824 Bmur_1828 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634109.1 2091549 D 526224 CDS YP_003634110.1 296126858 9142825 complement(2093546..2094676) 1 NC_014150.1 KEGG: bhy:BHWA1_00870 ABC transporter BitD; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2094676 9142825 Bmur_1829 Brachyspira murdochii DSM 12563 ABC transporter YP_003634110.1 2093546 R 526224 CDS YP_003634111.1 296126859 9142826 complement(2094836..2095498) 1 NC_014150.1 KEGG: bhy:BHWA1_02118 bifunctional phosphoribosyl- AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP diphosphatase 2095498 9142826 Bmur_1830 Brachyspira murdochii DSM 12563 phosphoribosyl-ATP diphosphatase YP_003634111.1 2094836 R 526224 CDS YP_003634112.1 296126860 9142827 2095903..2096277 1 NC_014150.1 KEGG: bhy:BHWA1_02119 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 2096277 9142827 Bmur_1831 Brachyspira murdochii DSM 12563 30S ribosomal protein S12 YP_003634112.1 2095903 D 526224 CDS YP_003634113.1 296126861 9142828 2096292..2096762 1 NC_014150.1 KEGG: bhy:BHWA1_02120 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 2096762 9142828 Bmur_1832 Brachyspira murdochii DSM 12563 30S ribosomal protein S7 YP_003634113.1 2096292 D 526224 CDS YP_003634114.1 296126862 9142829 2096783..2098864 1 NC_014150.1 KEGG: bhy:BHWA1_02121 elongation factor G; TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; translation elongation factor G 2098864 9142829 Bmur_1833 Brachyspira murdochii DSM 12563 translation elongation factor G YP_003634114.1 2096783 D 526224 CDS YP_003634115.1 296126863 9142830 2098935..2100161 1 NC_014150.1 KEGG: bhy:BHWA1_02122 elongation factor Tu; TIGRFAM: translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; translation elongation factor Tu 2100161 9142830 Bmur_1834 Brachyspira murdochii DSM 12563 translation elongation factor Tu YP_003634115.1 2098935 D 526224 CDS YP_003634116.1 296126864 9142831 2100246..2100551 1 NC_014150.1 KEGG: bhy:BHWA1_02123 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 2100551 9142831 Bmur_1835 Brachyspira murdochii DSM 12563 30S ribosomal protein S10 YP_003634116.1 2100246 D 526224 CDS YP_003634117.1 296126865 9142832 2100656..2101309 1 NC_014150.1 KEGG: bhy:BHWA1_02124 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 2101309 9142832 Bmur_1836 Brachyspira murdochii DSM 12563 50S ribosomal protein L3 YP_003634117.1 2100656 D 526224 CDS YP_003634118.1 296126866 9142833 2101335..2101982 1 NC_014150.1 PFAM: ribosomal protein L4/L1e; KEGG: bhy:BHWA1_02125 50S ribosomal protein L4; 50S ribosomal protein L4 2101982 9142833 Bmur_1837 Brachyspira murdochii DSM 12563 50S ribosomal protein L4 YP_003634118.1 2101335 D 526224 CDS YP_003634119.1 296126867 9142834 2101988..2102287 1 NC_014150.1 PFAM: ribosomal protein L25/L23; KEGG: bhy:BHWA1_02126 50S ribosomal protein L23; ribosomal protein L25/L23 2102287 9142834 Bmur_1838 Brachyspira murdochii DSM 12563 ribosomal protein L25/L23 YP_003634119.1 2101988 D 526224 CDS YP_003634120.1 296126868 9142835 2102300..2103136 1 NC_014150.1 KEGG: bhy:BHWA1_02127 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 2103136 9142835 Bmur_1839 Brachyspira murdochii DSM 12563 50S ribosomal protein L2 YP_003634120.1 2102300 D 526224 CDS YP_003634121.1 296126869 9142836 2103136..2103405 1 NC_014150.1 KEGG: bhy:BHWA1_02128 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 2103405 9142836 Bmur_1840 Brachyspira murdochii DSM 12563 30S ribosomal protein S19 YP_003634121.1 2103136 D 526224 CDS YP_003634122.1 296126870 9142837 2103417..2103824 1 NC_014150.1 KEGG: bhy:BHWA1_02129 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 2103824 9142837 Bmur_1841 Brachyspira murdochii DSM 12563 50S ribosomal protein L22 YP_003634122.1 2103417 D 526224 CDS YP_003634123.1 296126871 9142838 2103828..2104565 1 NC_014150.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; ribosomal protein S3 domain; KH type 2 domain protein; KEGG: bhy:BHWA1_02130 30S ribosomal protein S3; SMART: KH domain protein; 30S ribosomal protein S3 2104565 9142838 Bmur_1842 Brachyspira murdochii DSM 12563 30S ribosomal protein S3 YP_003634123.1 2103828 D 526224 CDS YP_003634124.1 296126872 9142839 2104565..2104978 1 NC_014150.1 KEGG: bhy:BHWA1_02131 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L10e/L16; 50S ribosomal protein L16 2104978 9142839 Bmur_1843 Brachyspira murdochii DSM 12563 50S ribosomal protein L16 YP_003634124.1 2104565 D 526224 CDS YP_003634125.1 296126873 9142840 2104978..2105184 1 NC_014150.1 KEGG: bhy:BHWA1_02132 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 2105184 9142840 Bmur_1844 Brachyspira murdochii DSM 12563 50S ribosomal protein L29 YP_003634125.1 2104978 D 526224 CDS YP_003634126.1 296126874 9142841 2105197..2105559 1 NC_014150.1 KEGG: bhy:BHWA1_02133 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 2105559 9142841 Bmur_1845 Brachyspira murdochii DSM 12563 30S ribosomal protein S17 YP_003634126.1 2105197 D 526224 CDS YP_003634127.1 296126875 9142842 2105565..2105933 1 NC_014150.1 KEGG: bhy:BHWA1_02134 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 2105933 9142842 Bmur_1846 Brachyspira murdochii DSM 12563 50S ribosomal protein L14 YP_003634127.1 2105565 D 526224 CDS YP_003634128.1 296126876 9142843 2105935..2106276 1 NC_014150.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: bhy:BHWA1_02135 50S ribosomal protein L24; SMART: KOW domain protein; 50S ribosomal protein L24 2106276 9142843 Bmur_1847 Brachyspira murdochii DSM 12563 50S ribosomal protein L24 YP_003634128.1 2105935 D 526224 CDS YP_003634129.1 296126877 9142844 2106292..2106855 1 NC_014150.1 PFAM: ribosomal protein L5; KEGG: bhy:BHWA1_02136 50S ribosomal protein L5; 50S ribosomal protein L5 2106855 9142844 Bmur_1848 Brachyspira murdochii DSM 12563 50S ribosomal protein L5 YP_003634129.1 2106292 D 526224 CDS YP_003634130.1 296126878 9142845 2106855..2107040 1 NC_014150.1 PFAM: ribosomal protein S14; KEGG: ribosomal protein S14; 30S ribosomal protein S14 2107040 9142845 Bmur_1849 Brachyspira murdochii DSM 12563 30S ribosomal protein S14 YP_003634130.1 2106855 D 526224 CDS YP_003634131.1 296126879 9142846 2107058..2107459 1 NC_014150.1 PFAM: ribosomal protein S8; KEGG: bhy:BHWA1_02137 30S ribosomal protein S8; 30S ribosomal protein S8 2107459 9142846 Bmur_1850 Brachyspira murdochii DSM 12563 30S ribosomal protein S8 YP_003634131.1 2107058 D 526224 CDS YP_003634132.1 296126880 9142847 2107481..2108053 1 NC_014150.1 KEGG: bhy:BHWA1_02138 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 2108053 9142847 Bmur_1851 Brachyspira murdochii DSM 12563 50S ribosomal protein L6 YP_003634132.1 2107481 D 526224 CDS YP_003634133.1 296126881 9142848 2108064..2108420 1 NC_014150.1 KEGG: bhy:BHWA1_02139 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 2108420 9142848 Bmur_1852 Brachyspira murdochii DSM 12563 50S ribosomal protein L18 YP_003634133.1 2108064 D 526224 CDS YP_003634134.1 296126882 9142849 2108432..2108950 1 NC_014150.1 KEGG: bhy:BHWA1_02140 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein; 30S ribosomal protein S5 2108950 9142849 Bmur_1853 Brachyspira murdochii DSM 12563 30S ribosomal protein S5 YP_003634134.1 2108432 D 526224 CDS YP_003634135.1 296126883 9142850 2108950..2109129 1 NC_014150.1 KEGG: bhy:BHWA1_02141 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 2109129 9142850 Bmur_1854 Brachyspira murdochii DSM 12563 50S ribosomal protein L30 YP_003634135.1 2108950 D 526224 CDS YP_003634136.1 296126884 9142851 2109141..2109629 1 NC_014150.1 KEGG: bhy:BHWA1_02142 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; 50S ribosomal protein L15 2109629 9142851 Bmur_1855 Brachyspira murdochii DSM 12563 50S ribosomal protein L15 YP_003634136.1 2109141 D 526224 CDS YP_003634137.1 296126885 9142852 2109641..2110981 1 NC_014150.1 KEGG: bhy:BHWA1_02143 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 2110981 9142852 Bmur_1856 Brachyspira murdochii DSM 12563 preprotein translocase subunit SecY YP_003634137.1 2109641 D 526224 CDS YP_003634138.1 296126886 9142853 2110986..2111204 1 NC_014150.1 KEGG: bhy:BHWA1_02144 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 2111204 9142853 Bmur_1857 Brachyspira murdochii DSM 12563 translation initiation factor IF-1 YP_003634138.1 2110986 D 526224 CDS YP_003634139.1 296126887 9142854 2111229..2111345 1 NC_014150.1 KEGG: fsu:Fisuc_1400 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 2111345 9142854 Bmur_1858 Brachyspira murdochii DSM 12563 50S ribosomal protein L36 YP_003634139.1 2111229 D 526224 CDS YP_003634140.1 296126888 9142855 2111368..2111757 1 NC_014150.1 KEGG: bhy:BHWA1_02145 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 2111757 9142855 Bmur_1859 Brachyspira murdochii DSM 12563 30S ribosomal protein S13 YP_003634140.1 2111368 D 526224 CDS YP_003634141.1 296126889 9142856 2111774..2112184 1 NC_014150.1 KEGG: bhy:BHWA1_02146 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 2112184 9142856 Bmur_1860 Brachyspira murdochii DSM 12563 30S ribosomal protein S11 YP_003634141.1 2111774 D 526224 CDS YP_003634142.1 296126890 9142857 2112223..2112849 1 NC_014150.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: bhy:BHWA1_02147 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 2112849 9142857 Bmur_1861 Brachyspira murdochii DSM 12563 30S ribosomal protein S4 YP_003634142.1 2112223 D 526224 CDS YP_003634143.1 296126891 9142858 2112880..2113854 1 NC_014150.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; KEGG: bhy:BHWA1_02148 DNA-directed RNA polymerase alpha subunit; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 2113854 9142858 Bmur_1862 Brachyspira murdochii DSM 12563 DNA-directed RNA polymerase subunit alpha YP_003634143.1 2112880 D 526224 CDS YP_003634144.1 296126892 9142859 2113888..2114274 1 NC_014150.1 KEGG: bhy:BHWA1_02149 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 2114274 9142859 Bmur_1863 Brachyspira murdochii DSM 12563 50S ribosomal protein L17 YP_003634144.1 2113888 D 526224 CDS YP_003634145.1 296126893 9142860 2114407..2115897 1 NC_014150.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA- binding; KEGG: bhy:BHWA1_02150 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho 2115897 9142860 Bmur_1864 Brachyspira murdochii DSM 12563 transcription termination factor Rho YP_003634145.1 2114407 D 526224 CDS YP_003634146.1 296126894 9142861 2115923..2116519 1 NC_014150.1 KEGG: bhy:BHWA1_02151 Smr domain protein; small MutS related protein; C-terminal region of the MutS2 protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 2116519 9142861 Bmur_1865 Brachyspira murdochii DSM 12563 Smr protein/MutS2 YP_003634146.1 2115923 D 526224 CDS YP_003634147.1 296126895 9142862 complement(2116649..2117377) 1 NC_014150.1 KEGG: bhy:BHWA1_01565 amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2117377 9142862 Bmur_1866 Brachyspira murdochii DSM 12563 ABC transporter YP_003634147.1 2116649 R 526224 CDS YP_003634148.1 296126896 9142863 complement(2117370..2118083) 1 NC_014150.1 KEGG: bhy:BHWA1_01566 amino acid transport system permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2118083 9142863 Bmur_1867 Brachyspira murdochii DSM 12563 polar amino acid ABC transporter inner membrane subunit YP_003634148.1 2117370 R 526224 CDS YP_003634149.1 296126897 9142864 complement(2118202..2118945) 1 NC_014150.1 KEGG: bhy:BHWA1_01567 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 2118945 9142864 Bmur_1868 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634149.1 2118202 R 526224 CDS YP_003634150.1 296126898 9142865 2119187..2119795 1 NC_014150.1 KEGG: bhy:BHWA1_01568 LemA family protein; LemA family protein 2119795 9142865 Bmur_1869 Brachyspira murdochii DSM 12563 LemA family protein YP_003634150.1 2119187 D 526224 CDS YP_003634151.1 296126899 9142866 2119914..2120948 1 NC_014150.1 KEGG: bhy:BHWA1_01569 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: regulatory protein LacI; LacI family transcriptional regulator 2120948 9142866 Bmur_1870 Brachyspira murdochii DSM 12563 LacI family transcriptional regulator YP_003634151.1 2119914 D 526224 CDS YP_003634152.1 296126900 9142867 2121133..2121564 1 NC_014150.1 KEGG: bhy:BHWA1_01570 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 2121564 9142867 Bmur_1871 Brachyspira murdochii DSM 12563 50S ribosomal protein L19 YP_003634152.1 2121133 D 526224 CDS YP_003634153.1 296126901 9142868 2121602..2122429 1 NC_014150.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: bhy:BHWA1_01571 ferredoxin--DP(+) reductase subunit alpha ue; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2122429 9142868 Bmur_1872 Brachyspira murdochii DSM 12563 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_003634153.1 2121602 D 526224 CDS YP_003634154.1 296126902 9142869 2122658..2123551 1 NC_014150.1 PFAM: restriction endonuclease; KEGG: bhy:BHWA1_02110 restriction system protein Mrr; restriction endonuclease 2123551 9142869 Bmur_1873 Brachyspira murdochii DSM 12563 restriction endonuclease YP_003634154.1 2122658 D 526224 CDS YP_003634155.1 296126903 9142870 2123608..2124570 1 NC_014150.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: bhy:BHWA1_01673 thiamine monophosphate kinase; PFAM: AIR synthase related protein; thiamine-monophosphate kinase 2124570 9142870 Bmur_1874 Brachyspira murdochii DSM 12563 thiamine-monophosphate kinase YP_003634155.1 2123608 D 526224 CDS YP_003634156.1 296126904 9142871 2124675..2125850 1 NC_014150.1 KEGG: bhy:BHWA1_01674 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 2125850 9142871 Bmur_1875 Brachyspira murdochii DSM 12563 acetyl-CoA acetyltransferase YP_003634156.1 2124675 D 526224 CDS YP_003634157.1 296126905 9142872 2126313..2127482 1 NC_014150.1 TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_00811 AbgB, metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2127482 9142872 Bmur_1876 Brachyspira murdochii DSM 12563 amidohydrolase YP_003634157.1 2126313 D 526224 CDS YP_003634158.1 296126906 9142873 2127556..2127819 1 NC_014150.1 KEGG: bhy:BHWA1_01557 hypothetical protein; hypothetical protein 2127819 9142873 Bmur_1877 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634158.1 2127556 D 526224 CDS YP_003634159.1 296126907 9142874 complement(2127923..2129716) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_01558 glycosyltransferase; glycosyl transferase 2129716 9142874 Bmur_1878 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003634159.1 2127923 R 526224 CDS YP_003634160.1 296126908 9142875 complement(2129802..2130377) 1 NC_014150.1 PFAM: Radical SAM domain protein; KEGG: pna:Pnap_4602 radical SAM domain-containing protein; radical SAM protein 2130377 9142875 Bmur_1879 Brachyspira murdochii DSM 12563 radical SAM protein YP_003634160.1 2129802 R 526224 CDS YP_003634161.1 296126909 9142877 complement(2132234..2133373) 1 NC_014150.1 KEGG: pna:Pnap_4604 hypothetical protein; hypothetical protein 2133373 9142877 Bmur_1881 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634161.1 2132234 R 526224 CDS YP_003634162.1 296126910 9142878 complement(2133388..2135835) 1 NC_014150.1 SMART: nucleotide binding protein PINc; KEGG: bhy:BHWA1_01907 predicted nucleotide-binding domain PINc family; nucleotide binding protein PINc 2135835 9142878 Bmur_1882 Brachyspira murdochii DSM 12563 nucleotide binding protein PINc YP_003634162.1 2133388 R 526224 CDS YP_003634163.1 296126911 9142879 complement(2135871..2139725) 1 NC_014150.1 SMART: AAA ATPase; KEGG: pna:Pnap_4606 superfamily I DNA/RNA helicase; ATPase AAA 2139725 9142879 Bmur_1883 Brachyspira murdochii DSM 12563 ATPase AAA YP_003634163.1 2135871 R 526224 CDS YP_003634164.1 296126912 9142880 complement(2139933..2140445) 1 NC_014150.1 KEGG: bhy:BHWA1_01559 thioesterase; thioesterase 2140445 9142880 Bmur_1884 Brachyspira murdochii DSM 12563 thioesterase YP_003634164.1 2139933 R 526224 CDS YP_003634165.1 296126913 9142881 2140891..2141154 1 NC_014150.1 KEGG: bhy:BHWA1_01560 hypothetical protein; hypothetical protein 2141154 9142881 Bmur_1885 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634165.1 2140891 D 526224 CDS YP_003634166.1 296126914 9142882 2141164..2141559 1 NC_014150.1 KEGG: bhy:BHWA1_01561 hypothetical protein; hypothetical protein 2141559 9142882 Bmur_1886 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634166.1 2141164 D 526224 CDS YP_003634167.1 296126915 9142883 2141581..2142657 1 NC_014150.1 KEGG: bhy:BHWA1_01562 hypothetical protein; hypothetical protein 2142657 9142883 Bmur_1887 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634167.1 2141581 D 526224 CDS YP_003634168.1 296126916 9142884 2142674..2143579 1 NC_014150.1 KEGG: bhy:BHWA1_01563 hypothetical protein; hypothetical protein 2143579 9142884 Bmur_1888 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634168.1 2142674 D 526224 CDS YP_003634169.1 296126917 9142885 2144034..2146805 1 NC_014150.1 KEGG: bhy:BHWA1_01321 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 2146805 9142885 Bmur_1889 Brachyspira murdochii DSM 12563 isoleucyl-tRNA synthetase YP_003634169.1 2144034 D 526224 CDS YP_003634170.1 296126918 9142886 complement(2146887..2148509) 1 NC_014150.1 KEGG: aae:aq_793 ATP-dependent DNA helicase REP; superfamily I DNA and RNA helicase-like protein 2148509 9142886 Bmur_1890 Brachyspira murdochii DSM 12563 superfamily I DNA and RNA helicase-like protein YP_003634170.1 2146887 R 526224 CDS YP_003634171.1 296126919 9142887 complement(2148499..2150385) 1 NC_014150.1 PFAM: SMC domain protein; KEGG: lsl:LSL_1565 hypothetical protein; SMC domain-containing protein 2150385 9142887 Bmur_1891 Brachyspira murdochii DSM 12563 SMC domain-containing protein YP_003634171.1 2148499 R 526224 CDS YP_003634172.1 296126920 9142888 2150714..2153890 1 NC_014150.1 PFAM: protein of unknown function DUF450; N-6 DNA methylase; Eco57I restriction endonuclease; KEGG: bhy:BHWA1_01318 restriction enzyme methylase subunit; hypothetical protein 2153890 9142888 Bmur_1892 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634172.1 2150714 D 526224 CDS YP_003634173.1 296126921 9142889 2153891..2155045 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 2155045 9142889 Bmur_1893 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634173.1 2153891 D 526224 CDS YP_003634174.1 296126922 9142891 2156475..2157281 1 NC_014150.1 PFAM: RES domain protein; KEGG: bpu:BPUM_2269 hypothetical protein; RES domain-containing protein 2157281 9142891 Bmur_1895 Brachyspira murdochii DSM 12563 RES domain-containing protein YP_003634174.1 2156475 D 526224 CDS YP_003634175.1 296126923 9142892 2157282..2158235 1 NC_014150.1 KEGG: bth:BT_4741 hypothetical protein; hypothetical protein 2158235 9142892 Bmur_1896 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634175.1 2157282 D 526224 CDS YP_003634176.1 296126924 9142893 2158447..2159679 1 NC_014150.1 KEGG: bhy:BHWA1_01313 hypothetical protein; hypothetical protein 2159679 9142893 Bmur_1897 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634176.1 2158447 D 526224 CDS YP_003634177.1 296126925 9142894 2160174..2162009 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2162009 9142894 Bmur_1898 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634177.1 2160174 D 526224 CDS YP_003634178.1 296126926 9142896 2164099..2164413 1 NC_014150.1 KEGG: pth:PTH_2162 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 2164413 9142896 Bmur_1900 Brachyspira murdochii DSM 12563 XRE family transcriptional regulator YP_003634178.1 2164099 D 526224 CDS YP_003634179.1 296126927 9142897 2164410..2165321 1 NC_014150.1 KEGG: csc:Csac_2641 hypothetical protein; hypothetical protein 2165321 9142897 Bmur_1901 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634179.1 2164410 D 526224 CDS YP_003634180.1 296126928 9142898 2165490..2166704 1 NC_014150.1 KEGG: bhy:BHWA1_01313 hypothetical protein; hypothetical protein 2166704 9142898 Bmur_1902 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634180.1 2165490 D 526224 CDS YP_003634181.1 296126929 9142899 2166776..2167051 1 NC_014150.1 KEGG: bth:BT_0938 hypothetical protein; hypothetical protein 2167051 9142899 Bmur_1903 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634181.1 2166776 D 526224 CDS YP_003634182.1 296126930 9142900 2167169..2169487 1 NC_014150.1 KEGG: ter:Tery_1465 signal transduction protein; hypothetical protein 2169487 9142900 Bmur_1904 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634182.1 2167169 D 526224 CDS YP_003634183.1 296126931 9142901 complement(2169658..2170275) 1 NC_014150.1 KEGG: bhy:BHWA1_01307 phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 2170275 9142901 Bmur_1905 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003634183.1 2169658 R 526224 CDS YP_003634184.1 296126932 9142902 2170376..2170630 1 NC_014150.1 KEGG: bhy:BHWA1_01306 hypothetical protein; hypothetical protein 2170630 9142902 Bmur_1906 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634184.1 2170376 D 526224 CDS YP_003634185.1 296126933 9142903 2170965..2174081 1 NC_014150.1 PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_01305 AcrB, cation/multidrug efflux pump; acriflavin resistance protein 2174081 9142903 Bmur_1907 Brachyspira murdochii DSM 12563 acriflavin resistance protein YP_003634185.1 2170965 D 526224 CDS YP_003634186.1 296126934 9142904 complement(2174396..2175115) 1 NC_014150.1 KEGG: bhy:BHWA1_00027 hypothetical protein; hypothetical protein 2175115 9142904 Bmur_1908 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634186.1 2174396 R 526224 CDS YP_003634187.1 296126935 9142905 2175695..2177077 1 NC_014150.1 KEGG: bhy:BHWA1_01301 hypothetical protein; hypothetical protein 2177077 9142905 Bmur_1909 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634187.1 2175695 D 526224 CDS YP_003634188.1 296126936 9142906 2177255..2177458 1 NC_014150.1 KEGG: bhy:BHWA1_01303 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 2177458 9142906 Bmur_1910 Brachyspira murdochii DSM 12563 50S ribosomal protein L31 YP_003634188.1 2177255 D 526224 CDS YP_003634189.1 296126937 9142907 2177462..2178430 1 NC_014150.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bhy:BHWA1_02580 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 2178430 9142907 Bmur_1911 Brachyspira murdochii DSM 12563 DNA methylase N-4/N-6 domain-containing protein YP_003634189.1 2177462 D 526224 CDS YP_003634190.1 296126938 9142908 2178476..2179177 1 NC_014150.1 KEGG: bhy:BHWA1_01304 hypothetical protein; PFAM: B3/4 domain protein; SMART: B3/4 domain protein; B3/4 domain-containing protein 2179177 9142908 Bmur_1912 Brachyspira murdochii DSM 12563 B3/4 domain-containing protein YP_003634190.1 2178476 D 526224 CDS YP_003634191.1 296126939 9142909 complement(2179399..2180652) 1 NC_014150.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: bhy:BHWA1_01297 phosphoribosylamine-glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP- grasp (A) domain; phosphoribosylglycinamide synthetase, N- domain; phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine/glycine ligase 2180652 9142909 Bmur_1913 Brachyspira murdochii DSM 12563 phosphoribosylamine/glycine ligase YP_003634191.1 2179399 R 526224 CDS YP_003634192.1 296126940 9142910 2181304..2182722 1 NC_014150.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: art:Arth_0543 exo-alpha-sialidase; glycosyl hydrolase family protein 2182722 9142910 Bmur_1914 Brachyspira murdochii DSM 12563 glycosyl hydrolase family protein YP_003634192.1 2181304 D 526224 CDS YP_003634193.1 296126941 9142911 2182741..2183961 1 NC_014150.1 PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_02382 variable surface protein VspH; serpulina hyodysenteriae variable surface protein 2183961 9142911 Bmur_1915 Brachyspira murdochii DSM 12563 serpulina hyodysenteriae variable surface protein YP_003634193.1 2182741 D 526224 CDS YP_003634194.1 296126942 9142912 2184107..2184991 1 NC_014150.1 PFAM: polyprenyl synthetase; KEGG: bhy:BHWA1_01299 geranylgeranyl pyrophosphate synthase; polyprenyl synthetase 2184991 9142912 Bmur_1916 Brachyspira murdochii DSM 12563 polyprenyl synthetase YP_003634194.1 2184107 D 526224 CDS YP_003634195.1 296126943 9142913 2185089..2186939 1 NC_014150.1 PFAM: protein of unknown function DUF115; KEGG: bhy:BHWA1_01300 hypothetical protein; hypothetical protein 2186939 9142913 Bmur_1917 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634195.1 2185089 D 526224 CDS YP_003634196.1 296126944 9142914 2187421..2188008 1 NC_014150.1 KEGG: abu:Abu_1515 hypothetical protein; hypothetical protein 2188008 9142914 Bmur_1918 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634196.1 2187421 D 526224 CDS YP_003634197.1 296126945 9142915 2188051..2188680 1 NC_014150.1 KEGG: abu:Abu_1516 hypothetical protein; hypothetical protein 2188680 9142915 Bmur_1919 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634197.1 2188051 D 526224 CDS YP_003634198.1 296126946 9142916 2188717..2189064 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2189064 9142916 Bmur_1920 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634198.1 2188717 D 526224 CDS YP_003634199.1 296126947 9142917 2189102..2189374 1 NC_014150.1 KEGG: abu:Abu_1517 hypothetical protein; hypothetical protein 2189374 9142917 Bmur_1921 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634199.1 2189102 D 526224 CDS YP_003634200.1 296126948 9142918 complement(2189388..2190182) 1 NC_014150.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: bhy:BHWA1_01409 methionine aminopeptidase; PFAM: peptidase M24; methionine aminopeptidase 2190182 9142918 Bmur_1922 Brachyspira murdochii DSM 12563 methionine aminopeptidase YP_003634200.1 2189388 R 526224 CDS YP_003634201.1 296126949 9142919 complement(2190200..2190463) 1 NC_014150.1 KEGG: bhy:BHWA1_01408 membrane protein; hypothetical protein 2190463 9142919 Bmur_1923 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634201.1 2190200 R 526224 CDS YP_003634202.1 296126950 9142920 complement(2190494..2194504) 1 NC_014150.1 KEGG: bhy:BHWA1_01407 hypothetical protein; ATPase AAA 2194504 9142920 Bmur_1924 Brachyspira murdochii DSM 12563 ATPase AAA YP_003634202.1 2190494 R 526224 CDS YP_003634203.1 296126951 9142921 complement(2194538..2196607) 1 NC_014150.1 KEGG: bhy:BHWA1_01406 hypothetical protein; hypothetical protein 2196607 9142921 Bmur_1925 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634203.1 2194538 R 526224 CDS YP_003634204.1 296126952 9142923 2197084..2197689 1 NC_014150.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: bhy:BHWA1_01405 HAD superfamily hydrolase; HAD-superfamily hydrolase 2197689 9142923 Bmur_1926 Brachyspira murdochii DSM 12563 HAD-superfamily hydrolase YP_003634204.1 2197084 D 526224 CDS YP_003634205.1 296126953 9142924 2197719..2199509 1 NC_014150.1 KEGG: bhy:BHWA1_01404 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 2199509 9142924 Bmur_1927 Brachyspira murdochii DSM 12563 integral membrane sensor signal transduction histidine kinase YP_003634205.1 2197719 D 526224 CDS YP_003634206.1 296126954 9142925 complement(2199514..2199870) 1 NC_014150.1 KEGG: bhy:BHWA1_01403 response regulator; response regulator 2199870 9142925 Bmur_1928 Brachyspira murdochii DSM 12563 response regulator YP_003634206.1 2199514 R 526224 CDS YP_003634207.1 296126955 9142927 2200144..2201148 1 NC_014150.1 KEGG: bhy:BHWA1_01400 hypothetical protein; hypothetical protein 2201148 9142927 Bmur_1929 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634207.1 2200144 D 526224 CDS YP_003634208.1 296126956 9142928 2201251..2202390 1 NC_014150.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bhy:BHWA1_01399 metal dependant phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 2202390 9142928 Bmur_1930 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003634208.1 2201251 D 526224 CDS YP_003634209.1 296126957 9142929 complement(2202400..2202732) 1 NC_014150.1 KEGG: bhy:BHWA1_01398 hypothetical protein; hypothetical protein 2202732 9142929 Bmur_1931 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634209.1 2202400 R 526224 CDS YP_003634210.1 296126958 9142930 complement(2202735..2203208) 1 NC_014150.1 PFAM: CheC domain protein; KEGG: bhy:BHWA1_01397 chemotaxis protein CheC; chemotaxis protein CheC 2203208 9142930 Bmur_1932 Brachyspira murdochii DSM 12563 chemotaxis protein CheC YP_003634210.1 2202735 R 526224 CDS YP_003634211.1 296126959 9142931 2203406..2203723 1 NC_014150.1 KEGG: bhy:BHWA1_01396 hypothetical protein; hypothetical protein 2203723 9142931 Bmur_1933 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634211.1 2203406 D 526224 CDS YP_003634212.1 296126960 9142932 2203727..2212801 1 NC_014150.1 KEGG: bhy:BHWA1_01395 hypothetical protein; hypothetical protein 2212801 9142932 Bmur_1934 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634212.1 2203727 D 526224 CDS YP_003634213.1 296126961 9142933 complement(2212926..2213453) 1 NC_014150.1 KEGG: bhy:BHWA1_01394 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 2213453 9142933 Bmur_1935 Brachyspira murdochii DSM 12563 uracil phosphoribosyltransferase YP_003634213.1 2212926 R 526224 CDS YP_003634214.1 296126962 9142934 2213707..2214255 1 NC_014150.1 PFAM: flagellar basal body-associated protein FliL; KEGG: bhy:BHWA1_01393 flagellar basal body- associated protein; flagellar basal body protein FliL 2214255 9142934 Bmur_1936 Brachyspira murdochii DSM 12563 flagellar basal body protein FliL YP_003634214.1 2213707 D 526224 CDS YP_003634215.1 296126963 9142935 2214297..2215328 1 NC_014150.1 KEGG: bhy:BHWA1_01392 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM 2215328 9142935 Bmur_1937 Brachyspira murdochii DSM 12563 flagellar motor switch protein FliM YP_003634215.1 2214297 D 526224 CDS YP_003634216.1 296126964 9142936 2215333..2216412 1 NC_014150.1 KEGG: bhy:BHWA1_01391 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN 2216412 9142936 Bmur_1938 Brachyspira murdochii DSM 12563 flagellar motor switch protein FliN YP_003634216.1 2215333 D 526224 CDS YP_003634217.1 296126965 9142938 2216908..2217462 1 NC_014150.1 KEGG: bhy:BHWA1_02578 hypothetical protein; hypothetical protein 2217462 9142938 Bmur_1940 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634217.1 2216908 D 526224 CDS YP_003634218.1 296126966 9142939 2217890..2218834 1 NC_014150.1 PFAM: cell wall hydrolase/autolysin; KEGG: bhy:BHWA1_01424 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 2218834 9142939 Bmur_1941 Brachyspira murdochii DSM 12563 cell wall hydrolase/autolysin YP_003634218.1 2217890 D 526224 CDS YP_003634219.1 296126967 9142940 2218905..2219810 1 NC_014150.1 PFAM: peptidase M23; KEGG: bhy:BHWA1_01423 peptidase; peptidase M23 2219810 9142940 Bmur_1942 Brachyspira murdochii DSM 12563 peptidase M23 YP_003634219.1 2218905 D 526224 CDS YP_003634220.1 296126968 9142941 2219794..2220027 1 NC_014150.1 KEGG: bhy:BHWA1_01422 hypothetical protein; hypothetical protein 2220027 9142941 Bmur_1943 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634220.1 2219794 D 526224 CDS YP_003634221.1 296126969 9142942 2220031..2221230 1 NC_014150.1 TIGRFAM: nicotinate phosphoribosyltransferase; KEGG: bhy:BHWA1_01421 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 2221230 9142942 Bmur_1944 Brachyspira murdochii DSM 12563 nicotinate phosphoribosyltransferase YP_003634221.1 2220031 D 526224 CDS YP_003634222.1 296126970 9142943 2221840..2221983 1 NC_014150.1 KEGG: bhy:BHWA1_02330 hypothetical protein; hypothetical protein 2221983 9142943 Bmur_1945 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634222.1 2221840 D 526224 CDS YP_003634223.1 296126971 9142944 complement(2221987..2223099) 1 NC_014150.1 KEGG: bhy:BHWA1_02331 ATP phosphoribosyltransferase regulatory subunit; ATP phosphoribosyltransferase 2223099 9142944 Bmur_1946 Brachyspira murdochii DSM 12563 ATP phosphoribosyltransferase YP_003634223.1 2221987 R 526224 CDS YP_003634224.1 296126972 9142945 2223315..2223539 1 NC_014150.1 KEGG: bhy:BHWA1_02313 hypothetical protein; hypothetical protein 2223539 9142945 Bmur_1947 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634224.1 2223315 D 526224 CDS YP_003634225.1 296126973 9142946 2223566..2223979 1 NC_014150.1 KEGG: bhy:BHWA1_02314 hypothetical protein; hypothetical protein 2223979 9142946 Bmur_1948 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634225.1 2223566 D 526224 CDS YP_003634226.1 296126974 9142947 complement(2223983..2224693) 1 NC_014150.1 PFAM: LrgB family protein; KEGG: bhy:BHWA1_02315 LrgB-like family protein; LrgB family protein 2224693 9142947 Bmur_1949 Brachyspira murdochii DSM 12563 LrgB family protein YP_003634226.1 2223983 R 526224 CDS YP_003634227.1 296126975 9142948 complement(2224723..2225082) 1 NC_014150.1 PFAM: LrgA family protein; KEGG: bhy:BHWA1_02316 effector of murein hydrolase LrgA; LrgA family protein 2225082 9142948 Bmur_1950 Brachyspira murdochii DSM 12563 LrgA family protein YP_003634227.1 2224723 R 526224 CDS YP_003634228.1 296126976 9142949 2225289..2225465 1 NC_014150.1 KEGG: bhy:BHWA1_02317 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 2225465 9142949 Bmur_1951 Brachyspira murdochii DSM 12563 50S ribosomal protein L33 YP_003634228.1 2225289 D 526224 CDS YP_003634229.1 296126977 9142951 2225620..2225940 1 NC_014150.1 KEGG: bhy:BHWA1_02319 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; Preprotein translocase subunit SecE 2225940 9142951 Bmur_1952 Brachyspira murdochii DSM 12563 Preprotein translocase subunit SecE YP_003634229.1 2225620 D 526224 CDS YP_003634230.1 296126978 9142952 2225947..2226534 1 NC_014150.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: bhy:BHWA1_02320 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor 2226534 9142952 Bmur_1953 Brachyspira murdochii DSM 12563 NusG antitermination factor YP_003634230.1 2225947 D 526224 CDS YP_003634231.1 296126979 9142953 2226562..2226984 1 NC_014150.1 TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11-like; KEGG: bhy:BHWA1_02321 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 2226984 9142953 Bmur_1954 Brachyspira murdochii DSM 12563 50S ribosomal protein L11 YP_003634231.1 2226562 D 526224 CDS YP_003634232.1 296126980 9142954 2227051..2227752 1 NC_014150.1 KEGG: bhy:BHWA1_02322 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 2227752 9142954 Bmur_1955 Brachyspira murdochii DSM 12563 50S ribosomal protein L1 YP_003634232.1 2227051 D 526224 CDS YP_003634233.1 296126981 9142955 2227857..2228381 1 NC_014150.1 PFAM: ribosomal protein L10; KEGG: bhy:BHWA1_02323 50S ribosomal protein L10; 50S ribosomal protein L10 2228381 9142955 Bmur_1956 Brachyspira murdochii DSM 12563 50S ribosomal protein L10 YP_003634233.1 2227857 D 526224 CDS YP_003634234.1 296126982 9142956 2228444..2228830 1 NC_014150.1 KEGG: bhy:BHWA1_02324 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2228830 9142956 Bmur_1957 Brachyspira murdochii DSM 12563 50S ribosomal protein L7/L12 YP_003634234.1 2228444 D 526224 CDS YP_003634235.1 296126983 9142957 2228963..2232484 1 NC_014150.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; KEGG: bhy:BHWA1_02325 DNA-directed RNA polymerase beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta 2232484 9142957 Bmur_1958 Brachyspira murdochii DSM 12563 DNA-directed RNA polymerase subunit beta YP_003634235.1 2228963 D 526224 CDS YP_003634236.1 296126984 9142958 2232504..2236706 1 NC_014150.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: bhy:BHWA1_02326 DNA-directed RNA polymerase beta' subunit; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 2236706 9142958 Bmur_1959 Brachyspira murdochii DSM 12563 DNA-directed RNA polymerase subunit beta' YP_003634236.1 2232504 D 526224 CDS YP_003634237.1 296126985 9142959 2236792..2237733 1 NC_014150.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bhy:BHWA1_02327 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 2237733 9142959 Bmur_1960 Brachyspira murdochii DSM 12563 C4-dicarboxylate transporter/malic acid transport protein YP_003634237.1 2236792 D 526224 CDS YP_003634238.1 296126986 9142960 complement(2237767..2238522) 1 NC_014150.1 KEGG: mar:MAE_18950 hypothetical protein; hypothetical protein 2238522 9142960 Bmur_1961 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634238.1 2237767 R 526224 CDS YP_003634239.1 296126987 9142961 complement(2238519..2239298) 1 NC_014150.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: emi:Emin_0686 DNA methylase N-4/N-6 domain- containing protein; DNA methylase N-4/N-6 domain-containing protein 2239298 9142961 Bmur_1962 Brachyspira murdochii DSM 12563 DNA methylase N-4/N-6 domain-containing protein YP_003634239.1 2238519 R 526224 CDS YP_003634240.1 296126988 9142962 complement(2239305..2240579) 1 NC_014150.1 TIGRFAM: histidinol dehydrogenase; KEGG: bhy:BHWA1_02328 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase 2240579 9142962 Bmur_1963 Brachyspira murdochii DSM 12563 histidinol dehydrogenase YP_003634240.1 2239305 R 526224 CDS YP_003634241.1 296126989 9142963 complement(2240592..2241212) 1 NC_014150.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: bhy:BHWA1_02329 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 2241212 9142963 Bmur_1964 Brachyspira murdochii DSM 12563 ATP phosphoribosyltransferase YP_003634241.1 2240592 R 526224 CDS YP_003634242.1 296126990 9142964 complement(2241500..2242330) 1 NC_014150.1 TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; KEGG: bhy:BHWA1_02182 pantoate-beta-alanine ligase; pantothenate synthase; PFAM: Pantoate-beta-alanine ligase; pantoate/beta-alanine ligase 2242330 9142964 Bmur_1965 Brachyspira murdochii DSM 12563 pantoate/beta-alanine ligase YP_003634242.1 2241500 R 526224 CDS YP_003634243.1 296126991 9142965 complement(2242335..2242796) 1 NC_014150.1 KEGG: bhy:BHWA1_02183 hypothetical protein; hypothetical protein 2242796 9142965 Bmur_1966 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634243.1 2242335 R 526224 CDS YP_003634244.1 296126992 9142966 2243179..2243778 1 NC_014150.1 KEGG: mat:MARTH_orf139 hypothetical protein; hypothetical protein 2243778 9142966 Bmur_1967 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634244.1 2243179 D 526224 CDS YP_003634245.1 296126993 9142967 complement(2243773..2244747) 1 NC_014150.1 TIGRFAM: DNA-cytosine methyltransferase; KEGG: cce:Ccel_2549 DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 2244747 9142967 Bmur_1968 Brachyspira murdochii DSM 12563 DNA-cytosine methyltransferase YP_003634245.1 2243773 R 526224 CDS YP_003634246.1 296126994 9142968 complement(2244895..2248089) 1 NC_014150.1 PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_02184 acriflavin resistance protein ; heavy metal efflux pump; cation/multidrug efflux pump; acriflavin resistance protein 2248089 9142968 Bmur_1969 Brachyspira murdochii DSM 12563 acriflavin resistance protein YP_003634246.1 2244895 R 526224 CDS YP_003634247.1 296126995 9142969 complement(2248234..2249697) 1 NC_014150.1 KEGG: bhy:BHWA1_02185 integral outer membrane protein TolC, efflux pump component; integral outer membrane protein TolC, efflux pump component 2249697 9142969 Bmur_1970 Brachyspira murdochii DSM 12563 integral outer membrane protein TolC, efflux pump component YP_003634247.1 2248234 R 526224 CDS YP_003634248.1 296126996 9142970 complement(2249727..2250512) 1 NC_014150.1 PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_02186 hypothetical protein; TetR family transcriptional regulator 2250512 9142970 Bmur_1971 Brachyspira murdochii DSM 12563 TetR family transcriptional regulator YP_003634248.1 2249727 R 526224 CDS YP_003634249.1 296126997 9142971 2250738..2251073 1 NC_014150.1 KEGG: bhy:BHWA1_02187 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 2251073 9142971 Bmur_1972 Brachyspira murdochii DSM 12563 anti-sigma-factor antagonist YP_003634249.1 2250738 D 526224 CDS YP_003634250.1 296126998 9142972 2251216..2252127 1 NC_014150.1 KEGG: bhy:BHWA1_02188 F0F1-type ATP synthase, subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 subunit A 2252127 9142972 Bmur_1973 Brachyspira murdochii DSM 12563 ATP synthase F0 subunit A YP_003634250.1 2251216 D 526224 CDS YP_003634251.1 296126999 9142973 2252186..2252407 1 NC_014150.1 KEGG: bhy:BHWA1_02189 F0F1-type ATP synthase, subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; ATP synthase F0 subunit C 2252407 9142973 Bmur_1974 Brachyspira murdochii DSM 12563 ATP synthase F0 subunit C YP_003634251.1 2252186 D 526224 CDS YP_003634252.1 296127000 9142974 2252436..2252936 1 NC_014150.1 KEGG: bhy:BHWA1_02190 F0F1-type ATP synthase, subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; ATP synthase F0 subunit B 2252936 9142974 Bmur_1975 Brachyspira murdochii DSM 12563 ATP synthase F0 subunit B YP_003634252.1 2252436 D 526224 CDS YP_003634253.1 296127001 9142975 2252976..2253524 1 NC_014150.1 KEGG: bhy:BHWA1_02191 F0F1-type ATP synthase, delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 2253524 9142975 Bmur_1976 Brachyspira murdochii DSM 12563 ATP synthase F1 subunit delta YP_003634253.1 2252976 D 526224 CDS YP_003634254.1 296127002 9142976 2253560..2254204 1 NC_014150.1 KEGG: bhy:BHWA1_02192 F0F1-type ATP synthase, delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 2254204 9142976 Bmur_1977 Brachyspira murdochii DSM 12563 ATP synthase F1 subunit delta YP_003634254.1 2253560 D 526224 CDS YP_003634255.1 296127003 9142977 2254232..2255731 1 NC_014150.1 TIGRFAM: ATP synthase F1, alpha subunit; KEGG: bhy:BHWA1_02193 F0F1-type ATP synthase, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha 2255731 9142977 Bmur_1978 Brachyspira murdochii DSM 12563 ATP synthase F1 subunit alpha YP_003634255.1 2254232 D 526224 CDS YP_003634256.1 296127004 9142978 2255735..2256568 1 NC_014150.1 PFAM: glycosyl transferase 14; KEGG: phe:Phep_1973 glycosyl transferase 14; glycosyl transferase 2256568 9142978 Bmur_1979 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003634256.1 2255735 D 526224 CDS YP_003634257.1 296127005 9142979 2256597..2257475 1 NC_014150.1 KEGG: bhy:BHWA1_02194 F0F1-type ATP synthase, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; ATP synthase F1 subunit gamma 2257475 9142979 Bmur_1980 Brachyspira murdochii DSM 12563 ATP synthase F1 subunit gamma YP_003634257.1 2256597 D 526224 CDS YP_003634258.1 296127006 9142980 2257604..2257828 1 NC_014150.1 KEGG: bhy:BHWA1_02196 ankyrin repeat- containing protein; ankyrin repeat-containing protein 2257828 9142980 Bmur_1981 Brachyspira murdochii DSM 12563 ankyrin repeat-containing protein YP_003634258.1 2257604 D 526224 CDS YP_003634259.1 296127007 9142981 2257889..2258362 1 NC_014150.1 KEGG: bhy:BHWA1_02196 ankyrin repeat- containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2258362 9142981 Bmur_1982 Brachyspira murdochii DSM 12563 ankyrin YP_003634259.1 2257889 D 526224 CDS YP_003634260.1 296127008 9142982 2259015..2259776 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_02196 ankyrin repeat- containing protein; ankyrin 2259776 9142982 Bmur_1983 Brachyspira murdochii DSM 12563 ankyrin YP_003634260.1 2259015 D 526224 CDS YP_003634261.1 296127009 9142983 complement(2260411..2261532) 1 NC_014150.1 KEGG: bhy:BHWA1_02208 inositol-5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; GMP reductase 2261532 9142983 Bmur_1984 Brachyspira murdochii DSM 12563 GMP reductase YP_003634261.1 2260411 R 526224 CDS YP_003634262.1 296127010 9142984 2261816..2262877 1 NC_014150.1 KEGG: bhy:BHWA1_02209 hypothetical protein; hypothetical protein 2262877 9142984 Bmur_1985 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634262.1 2261816 D 526224 CDS YP_003634263.1 296127011 9142985 complement(2262925..2263458) 1 NC_014150.1 PFAM: Rubrerythrin; KEGG: bhy:BHWA1_02210 rubrerythrin; rubrerythrin 2263458 9142985 Bmur_1986 Brachyspira murdochii DSM 12563 rubrerythrin YP_003634263.1 2262925 R 526224 CDS YP_003634264.1 296127012 9142986 complement(2263507..2264103) 1 NC_014150.1 KEGG: bhy:BHWA1_02211 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; superoxide dismutase 2264103 9142986 Bmur_1987 Brachyspira murdochii DSM 12563 superoxide dismutase YP_003634264.1 2263507 R 526224 CDS YP_003634265.1 296127013 9142987 complement(2264273..2265313) 1 NC_014150.1 KEGG: bhy:BHWA1_02212 hypothetical protein; hypothetical protein 2265313 9142987 Bmur_1988 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634265.1 2264273 R 526224 CDS YP_003634266.1 296127014 9142988 complement(2265323..2266717) 1 NC_014150.1 KEGG: bhy:BHWA1_02213 DNA polymerase III delta prime subunit; DNA polymerase III delta prime subunit 2266717 9142988 Bmur_1989 Brachyspira murdochii DSM 12563 DNA polymerase III delta prime subunit YP_003634266.1 2265323 R 526224 CDS YP_003634267.1 296127015 9142989 2266904..2270422 1 NC_014150.1 KEGG: bhy:BHWA1_02215 hypothetical protein; hypothetical protein 2270422 9142989 Bmur_1990 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634267.1 2266904 D 526224 CDS YP_003634268.1 296127016 9142990 2270447..2271145 1 NC_014150.1 KEGG: bhy:BHWA1_02216 ribonuclease HII; PFAM: ribonuclease HII/HIII; ribonuclease H 2271145 9142990 Bmur_1991 Brachyspira murdochii DSM 12563 ribonuclease H YP_003634268.1 2270447 D 526224 CDS YP_003634269.1 296127017 9142991 complement(2271271..2271606) 1 NC_014150.1 KEGG: bhy:BHWA1_02286 hypothetical protein; hypothetical protein 2271606 9142991 Bmur_1992 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634269.1 2271271 R 526224 CDS YP_003634270.1 296127018 9142992 complement(2271760..2271930) 1 NC_014150.1 KEGG: bhy:BHWA1_02288 hypothetical protein; hypothetical protein 2271930 9142992 Bmur_1993 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634270.1 2271760 R 526224 CDS YP_003634271.1 296127019 9142993 complement(2271953..2273038) 1 NC_014150.1 KEGG: bhy:BHWA1_02289 hypothetical protein; hypothetical protein 2273038 9142993 Bmur_1994 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634271.1 2271953 R 526224 CDS YP_003634272.1 296127020 9142994 complement(2273166..2273813) 1 NC_014150.1 KEGG: bhy:BHWA1_02290 invasin; opacity protein-like surface antigens; invasin; opacity protein-like surface antigen 2273813 9142994 Bmur_1995 Brachyspira murdochii DSM 12563 invasin; opacity protein-like surface antigen YP_003634272.1 2273166 R 526224 CDS YP_003634273.1 296127021 9142995 complement(2273824..2274489) 1 NC_014150.1 KEGG: bhy:BHWA1_02291 tia invasion determinant; tia invasion determinant 2274489 9142995 Bmur_1996 Brachyspira murdochii DSM 12563 tia invasion determinant YP_003634273.1 2273824 R 526224 CDS YP_003634274.1 296127022 9142996 complement(2274510..2275241) 1 NC_014150.1 KEGG: bhy:BHWA1_02292 hypothetical protein; hypothetical protein 2275241 9142996 Bmur_1997 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634274.1 2274510 R 526224 CDS YP_003634275.1 296127023 9142997 complement(2275258..2276217) 1 NC_014150.1 KEGG: bhy:BHWA1_02293 hypothetical protein; hypothetical protein 2276217 9142997 Bmur_1998 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634275.1 2275258 R 526224 CDS YP_003634276.1 296127024 9142998 complement(2276236..2276757) 1 NC_014150.1 KEGG: bhy:BHWA1_02294 hypothetical protein; hypothetical protein 2276757 9142998 Bmur_1999 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634276.1 2276236 R 526224 CDS YP_003634277.1 296127025 9142999 2277031..2277450 1 NC_014150.1 KEGG: bhy:BHWA1_02295 hypothetical protein; hypothetical protein 2277450 9142999 Bmur_2000 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634277.1 2277031 D 526224 CDS YP_003634278.1 296127026 9143000 2277480..2278505 1 NC_014150.1 KEGG: bhy:BHWA1_02296 D polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 2278505 9143000 Bmur_2001 Brachyspira murdochii DSM 12563 DNA polymerase III subunit delta YP_003634278.1 2277480 D 526224 CDS YP_003634279.1 296127027 9143002 2280007..2280681 1 NC_014150.1 PFAM: Late competence development protein ComFB; KEGG: bhy:BHWA1_02297 hypothetical protein; Late competence development protein ComFB 2280681 9143002 Bmur_2003 Brachyspira murdochii DSM 12563 Late competence development protein ComFB YP_003634279.1 2280007 D 526224 CDS YP_003634280.1 296127028 9143003 2280751..2281302 1 NC_014150.1 KEGG: bhy:BHWA1_02298 hypothetical protein; hypothetical protein 2281302 9143003 Bmur_2004 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634280.1 2280751 D 526224 CDS YP_003634281.1 296127029 9143004 2281426..2281812 1 NC_014150.1 PFAM: ferric-uptake regulator; KEGG: bhy:BHWA1_02299 ferric uptake regulator; ferric uptake regulator, Fur family 2281812 9143004 Bmur_2005 Brachyspira murdochii DSM 12563 ferric uptake regulator, Fur family YP_003634281.1 2281426 D 526224 CDS YP_003634282.1 296127030 9143005 2281942..2283528 1 NC_014150.1 PFAM: Domain of unknown function DUF1957; glycoside hydrolase 57; KEGG: bhy:BHWA1_02300 glycosyl hydrolase 57; hypothetical protein 2283528 9143005 Bmur_2006 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634282.1 2281942 D 526224 CDS YP_003634283.1 296127031 9143006 complement(2283634..2284155) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2284155 9143006 Bmur_2007 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634283.1 2283634 R 526224 CDS YP_003634284.1 296127032 9143008 complement(2284858..2286666) 1 NC_014150.1 KEGG: bhy:BHWA1_02304 peptidoglycan- binding LysM:peptidase M23B family; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; peptidase M23 2286666 9143008 Bmur_2008 Brachyspira murdochii DSM 12563 peptidase M23 YP_003634284.1 2284858 R 526224 CDS YP_003634285.1 296127033 9143009 complement(2286693..2286971) 1 NC_014150.1 PFAM: acylphosphatase; KEGG: bhy:BHWA1_02305 acylphosphatase; acylphosphatase 2286971 9143009 Bmur_2009 Brachyspira murdochii DSM 12563 acylphosphatase YP_003634285.1 2286693 R 526224 CDS YP_003634286.1 296127034 9143010 2287057..2287656 1 NC_014150.1 PFAM: methyltransferase small; KEGG: bhy:BHWA1_02306 methyltransferase small domain protein; methyltransferase small 2287656 9143010 Bmur_2010 Brachyspira murdochii DSM 12563 methyltransferase small YP_003634286.1 2287057 D 526224 CDS YP_003634287.1 296127035 9143011 complement(2287647..2288315) 1 NC_014150.1 KEGG: bhy:BHWA1_02307 phosphoesterase, phosphatidic acid phosphatase-related; PAP2 superfamily; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase 2288315 9143011 Bmur_2011 Brachyspira murdochii DSM 12563 phosphoesterase YP_003634287.1 2287647 R 526224 CDS YP_003634288.1 296127036 9143012 2288513..2289265 1 NC_014150.1 KEGG: bhy:BHWA1_02308 pyridoxine kinase; pyridoxine kinase 2289265 9143012 Bmur_2012 Brachyspira murdochii DSM 12563 pyridoxine kinase YP_003634288.1 2288513 D 526224 CDS YP_003634289.1 296127037 9143013 2289253..2290296 1 NC_014150.1 KEGG: bhy:BHWA1_02309 hypothetical protein; hypothetical protein 2290296 9143013 Bmur_2013 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634289.1 2289253 D 526224 CDS YP_003634290.1 296127038 9143014 complement(2290442..2291620) 1 NC_014150.1 KEGG: bhy:BHWA1_01152 hypothetical protein; PFAM: protein of unknown function DUF815; ATPase AAA; SMART: AAA ATPase; hypothetical protein 2291620 9143014 Bmur_2014 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634290.1 2290442 R 526224 CDS YP_003634291.1 296127039 9143015 2291851..2293512 1 NC_014150.1 KEGG: bhy:BHWA1_01153 methyl-accepting chemotaxis protein McpB; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2293512 9143015 Bmur_2015 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634291.1 2291851 D 526224 CDS YP_003634292.1 296127040 9143016 complement(2293578..2294705) 1 NC_014150.1 KEGG: bhy:BHWA1_02426 hypothetical protein; hypothetical protein 2294705 9143016 Bmur_2016 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634292.1 2293578 R 526224 CDS YP_003634293.1 296127041 9143017 2295186..2295995 1 NC_014150.1 KEGG: bhy:BHWA1_02217 hydrolase, HAD superfamily; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 2295995 9143017 Bmur_2017 Brachyspira murdochii DSM 12563 cof family hydrolase YP_003634293.1 2295186 D 526224 CDS YP_003634294.1 296127042 9143019 2296234..2297544 1 NC_014150.1 PFAM: trigger factor domain; KEGG: bhy:BHWA1_02220 trigger factor; trigger factor domain-containing protein 2297544 9143019 Bmur_2018 Brachyspira murdochii DSM 12563 trigger factor domain-containing protein YP_003634294.1 2296234 D 526224 CDS YP_003634295.1 296127043 9143020 2297562..2298164 1 NC_014150.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: bhy:BHWA1_02221 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 2298164 9143020 Bmur_2019 Brachyspira murdochii DSM 12563 ATP-dependent Clp protease, proteolytic subunit ClpP YP_003634295.1 2297562 D 526224 CDS YP_003634296.1 296127044 9143021 2298337..2299572 1 NC_014150.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; Clp ATPase-like; KEGG: bhy:BHWA1_02222 ATP-dependent protease ATP- binding subunit; SMART: AAA ATPase; hypothetical protein 2299572 9143021 Bmur_2020 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634296.1 2298337 D 526224 CDS YP_003634297.1 296127045 9143022 2299634..2300197 1 NC_014150.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW domain protein; Elongation factor P/YeiP protein; KEGG: bhy:BHWA1_02223 translation elongation factor P (EF-P); SMART: Elongation factor P; translation elongation factor P 2300197 9143022 Bmur_2021 Brachyspira murdochii DSM 12563 translation elongation factor P YP_003634297.1 2299634 D 526224 CDS YP_003634298.1 296127046 9143023 2300197..2300760 1 NC_014150.1 KEGG: bhy:BHWA1_02224 hypothetical protein; hypothetical protein 2300760 9143023 Bmur_2022 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634298.1 2300197 D 526224 CDS YP_003634299.1 296127047 9143024 complement(2300945..2302540) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02225 ABC-type oligopeptide transport system, periplasmic component; ABC transporter substrate-binding protein 2302540 9143024 Bmur_2023 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634299.1 2300945 R 526224 CDS YP_003634300.1 296127048 9143025 complement(2302825..2304435) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02226 ABC-type oligopeptide transport system, periplasmic component; ABC transporter substrate-binding protein 2304435 9143025 Bmur_2024 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634300.1 2302825 R 526224 CDS YP_003634301.1 296127049 9143026 2304786..2306135 1 NC_014150.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: bhy:BHWA1_02227 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 2306135 9143026 Bmur_2025 Brachyspira murdochii DSM 12563 acetyl-CoA hydrolase/transferase YP_003634301.1 2304786 D 526224 CDS YP_003634302.1 296127050 9143027 2306201..2308126 1 NC_014150.1 PFAM: acyl-CoA dehydrogenase domain protein; Rubredoxin-type Fe(Cys)4 protein; electron transfer flavoprotein alpha subunit; KEGG: bhy:BHWA1_02228 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 2308126 9143027 Bmur_2026 Brachyspira murdochii DSM 12563 acyl-CoA dehydrogenase YP_003634302.1 2306201 D 526224 CDS YP_003634303.1 296127051 9143028 2308162..2309376 1 NC_014150.1 KEGG: bhy:BHWA1_02229 flavoprotein; PFAM: flavodoxin/nitric oxide synthase; SMART: beta-lactamase domain protein; flavodoxin/nitric oxide synthase 2309376 9143028 Bmur_2027 Brachyspira murdochii DSM 12563 flavodoxin/nitric oxide synthase YP_003634303.1 2308162 D 526224 CDS YP_003634304.1 296127052 9143029 2309515..2311137 1 NC_014150.1 KEGG: bhy:BHWA1_02230 hypothetical protein; hypothetical protein 2311137 9143029 Bmur_2028 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634304.1 2309515 D 526224 CDS YP_003634305.1 296127053 9143030 2311219..2312295 1 NC_014150.1 KEGG: bhy:BHWA1_02231 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 2312295 9143030 Bmur_2029 Brachyspira murdochii DSM 12563 peptide chain release factor 1 YP_003634305.1 2311219 D 526224 CDS YP_003634306.1 296127054 9143031 2312320..2313012 1 NC_014150.1 KEGG: bhy:BHWA1_02232 hypothetical protein; hypothetical protein 2313012 9143031 Bmur_2030 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634306.1 2312320 D 526224 CDS YP_003634307.1 296127055 9143032 2313034..2314464 1 NC_014150.1 KEGG: bhy:BHWA1_02233 radical SAM protein ; predicted Fe-S oxidoreductase; radical SAM protein 2314464 9143032 Bmur_2031 Brachyspira murdochii DSM 12563 radical SAM protein YP_003634307.1 2313034 D 526224 CDS YP_003634308.1 296127056 9143033 2314474..2314905 1 NC_014150.1 KEGG: bhy:BHWA1_02234 hypothetical protein; hypothetical protein 2314905 9143033 Bmur_2032 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634308.1 2314474 D 526224 CDS YP_003634309.1 296127057 9143034 complement(2315000..2315986) 1 NC_014150.1 PFAM: nucleotidyl transferase; KEGG: bhy:BHWA1_02235 nucleotidyltransferase; nucleotidyl transferase 2315986 9143034 Bmur_2033 Brachyspira murdochii DSM 12563 nucleotidyl transferase YP_003634309.1 2315000 R 526224 CDS YP_003634310.1 296127058 9143035 complement(2316066..2316620) 1 NC_014150.1 KEGG: bhy:BHWA1_02236 ThiJ/PfpI domain-containing protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; DJ-1 family protein 2316620 9143035 Bmur_2034 Brachyspira murdochii DSM 12563 DJ-1 family protein YP_003634310.1 2316066 R 526224 CDS YP_003634311.1 296127059 9143036 complement(2316700..2317284) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_02237 TPR domain-containing protein; hypothetical protein 2317284 9143036 Bmur_2035 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634311.1 2316700 R 526224 CDS YP_003634312.1 296127060 9143037 complement(2317373..2318005) 1 NC_014150.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: bhy:BHWA1_02238 2-keto-3-deoxy-6- phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 2318005 9143037 Bmur_2036 Brachyspira murdochii DSM 12563 2-dehydro-3-deoxyphosphogluconate aldolase YP_003634312.1 2317373 R 526224 CDS YP_003634313.1 296127061 9143038 complement(2318049..2319455) 1 NC_014150.1 KEGG: bhy:BHWA1_02239 glucuronate isomerase; PFAM: glucuronate isomerase; glucuronate isomerase 2319455 9143038 Bmur_2037 Brachyspira murdochii DSM 12563 glucuronate isomerase YP_003634313.1 2318049 R 526224 CDS YP_003634314.1 296127062 9143039 complement(2319537..2320604) 1 NC_014150.1 TIGRFAM: mannonate dehydratase; KEGG: bhy:BHWA1_02240 mannonate dehydratase; PFAM: mannonate dehydratase; mannonate dehydratase 2320604 9143039 Bmur_2038 Brachyspira murdochii DSM 12563 mannonate dehydratase YP_003634314.1 2319537 R 526224 CDS YP_003634315.1 296127063 9143040 complement(2320624..2322252) 1 NC_014150.1 PFAM: mannitol dehydrogenase domain; mannitol dehydrogenase rossman domain; KEGG: bhy:BHWA1_02241 mannitol-1- phosphate/altronate dehydrogenase; mannitol dehydrogenase 2322252 9143040 Bmur_2039 Brachyspira murdochii DSM 12563 mannitol dehydrogenase YP_003634315.1 2320624 R 526224 CDS YP_003634316.1 296127064 9143041 complement(2322326..2323765) 1 NC_014150.1 KEGG: bhy:BHWA1_02242 sugar/sodium symporter; sugar/sodium symporter 2323765 9143041 Bmur_2040 Brachyspira murdochii DSM 12563 sugar/sodium symporter YP_003634316.1 2322326 R 526224 CDS YP_003634317.1 296127065 9143042 complement(2323839..2325644) 1 NC_014150.1 KEGG: bhy:BHWA1_02243 beta-D-glucuronidase; PFAM: glycoside hydrolase 2 TIM barrel; glycoside hydrolase 2 sugar binding; glycoside hydrolase 2 immunoglobulin domain protein beta- sandwich; beta-glucuronidase 2325644 9143042 Bmur_2041 Brachyspira murdochii DSM 12563 beta-glucuronidase YP_003634317.1 2323839 R 526224 CDS YP_003634318.1 296127066 9143043 complement(2325686..2326558) 1 NC_014150.1 KEGG: bhy:BHWA1_02244 hypothetical protein; hypothetical protein 2326558 9143043 Bmur_2042 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634318.1 2325686 R 526224 CDS YP_003634319.1 296127067 9143044 2326739..2327446 1 NC_014150.1 KEGG: bhy:BHWA1_02245 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein; GntR family transcriptional regulator 2327446 9143044 Bmur_2043 Brachyspira murdochii DSM 12563 GntR family transcriptional regulator YP_003634319.1 2326739 D 526224 CDS YP_003634320.1 296127068 9143045 complement(2327448..2328470) 1 NC_014150.1 PFAM: PfkB domain protein; KEGG: bhy:BHWA1_02246 carbohydrate kinase, PfkB family; PfkB domain-containing protein 2328470 9143045 Bmur_2044 Brachyspira murdochii DSM 12563 PfkB domain-containing protein YP_003634320.1 2327448 R 526224 CDS YP_003634321.1 296127069 9143047 complement(2329142..2329420) 1 NC_014150.1 KEGG: bhy:BHWA1_02248 hypothetical protein; hypothetical protein 2329420 9143047 Bmur_2046 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634321.1 2329142 R 526224 CDS YP_003634322.1 296127070 9143048 complement(2329608..2329895) 1 NC_014150.1 TIGRFAM: redox-active disulfide protein 2; KEGG: bhy:BHWA1_02249 hypothetical protein; redox-active disulfide protein 2 2329895 9143048 Bmur_2047 Brachyspira murdochii DSM 12563 redox-active disulfide protein 2 YP_003634322.1 2329608 R 526224 CDS YP_003634323.1 296127071 9143049 complement(2329936..2330946) 1 NC_014150.1 PFAM: permease; KEGG: bhy:BHWA1_02250 predicted permease; permease 2330946 9143049 Bmur_2048 Brachyspira murdochii DSM 12563 permease YP_003634323.1 2329936 R 526224 CDS YP_003634324.1 296127072 9143051 complement(2332165..2332488) 1 NC_014150.1 KEGG: bhy:BHWA1_02252 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator 2332488 9143051 Bmur_2050 Brachyspira murdochii DSM 12563 ArsR family transcriptional regulator YP_003634324.1 2332165 R 526224 CDS YP_003634325.1 296127073 9143052 2332659..2333684 1 NC_014150.1 KEGG: bhy:BHWA1_02253 aldose 1-epimerase; PFAM: Aldose 1-epimerase; aldose 1-epimerase 2333684 9143052 Bmur_2051 Brachyspira murdochii DSM 12563 aldose 1-epimerase YP_003634325.1 2332659 D 526224 CDS YP_003634326.1 296127074 9143053 2333722..2334357 1 NC_014150.1 PFAM: methyltransferase type 12; KEGG: bhy:BHWA1_02254 methyltransferase type 12 domain protein; methyltransferase type 12 2334357 9143053 Bmur_2052 Brachyspira murdochii DSM 12563 methyltransferase type 12 YP_003634326.1 2333722 D 526224 CDS YP_003634327.1 296127075 9143054 complement(2334445..2335683) 1 NC_014150.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_02257 cinnamyl-alcohol dehydrogenase ELI3-2 (cad); molecular chaperone GroES 2335683 9143054 Bmur_2053 Brachyspira murdochii DSM 12563 molecular chaperone GroES YP_003634327.1 2334445 R 526224 CDS YP_003634328.1 296127076 9143055 2336435..2336836 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_01643 TPR domain-containing protein; hypothetical protein 2336836 9143055 Bmur_2054 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634328.1 2336435 D 526224 CDS YP_003634329.1 296127077 9143056 complement(2337182..2339743) 1 NC_014150.1 KEGG: bhy:BHWA1_02260 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase 2339743 9143056 Bmur_2055 Brachyspira murdochii DSM 12563 leucyl-tRNA synthetase YP_003634329.1 2337182 R 526224 CDS YP_003634330.1 296127078 9143057 complement(2340213..2340578) 1 NC_014150.1 KEGG: bhy:BHWA1_02261 hypothetical protein; hypothetical protein 2340578 9143057 Bmur_2056 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634330.1 2340213 R 526224 CDS YP_003634331.1 296127079 9143058 complement(2340801..2341826) 1 NC_014150.1 KEGG: bhy:BHWA1_02262 ATPase; ATPase 2341826 9143058 Bmur_2057 Brachyspira murdochii DSM 12563 ATPase YP_003634331.1 2340801 R 526224 CDS YP_003634332.1 296127080 9143059 2341957..2342673 1 NC_014150.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: bhy:BHWA1_02263 phosphoribosylformimino-5- aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2342673 9143059 Bmur_2058 Brachyspira murdochii DSM 12563 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_003634332.1 2341957 D 526224 CDS YP_003634333.1 296127081 9143060 2342701..2343657 1 NC_014150.1 TIGRFAM: methyltransferase FkbM family; KEGG: bhy:BHWA1_02264 methyltransferase; FkbM family methyltransferase 2343657 9143060 Bmur_2059 Brachyspira murdochii DSM 12563 FkbM family methyltransferase YP_003634333.1 2342701 D 526224 CDS YP_003634334.1 296127082 9143061 2343769..2344275 1 NC_014150.1 PFAM: protein of unknown function DUF583; KEGG: bhy:BHWA1_02265 hypothetical protein; hypothetical protein 2344275 9143061 Bmur_2060 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634334.1 2343769 D 526224 CDS YP_003634335.1 296127083 9143062 2344295..2345089 1 NC_014150.1 KEGG: bhy:BHWA1_02266 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 2345089 9143062 Bmur_2061 Brachyspira murdochii DSM 12563 methionine aminopeptidase YP_003634335.1 2344295 D 526224 CDS YP_003634336.1 296127084 9143063 2345179..2346009 1 NC_014150.1 KEGG: bhy:BHWA1_02267 TPR domain-containing protein; hypothetical protein 2346009 9143063 Bmur_2062 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634336.1 2345179 D 526224 CDS YP_003634337.1 296127085 9143064 2346142..2347074 1 NC_014150.1 KEGG: bhy:BHWA1_01341 hypothetical protein; hypothetical protein 2347074 9143064 Bmur_2063 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634337.1 2346142 D 526224 CDS YP_003634338.1 296127086 9143065 2347297..2347971 1 NC_014150.1 TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, beta subunit; KEGG: bhy:BHWA1_02268 L-serine dehydratase, iron- sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid- binding ACT domain protein; L-serine dehydratase, iron-sulfur-dependent subunit beta 2347971 9143065 Bmur_2064 Brachyspira murdochii DSM 12563 L-serine dehydratase, iron-sulfur-dependent subunit beta YP_003634338.1 2347297 D 526224 CDS YP_003634339.1 296127087 9143066 2348027..2348908 1 NC_014150.1 TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, alpha subunit; KEGG: bhy:BHWA1_02269 L-serine dehydratase, iron- sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; L-serine dehydratase, iron-sulfur-dependent subunit alpha 2348908 9143066 Bmur_2065 Brachyspira murdochii DSM 12563 L-serine dehydratase, iron-sulfur-dependent subunit alpha YP_003634339.1 2348027 D 526224 CDS YP_003634340.1 296127088 9143067 2349205..2350179 1 NC_014150.1 KEGG: bhy:BHWA1_02271 ankyrin repeat- containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2350179 9143067 Bmur_2066 Brachyspira murdochii DSM 12563 ankyrin YP_003634340.1 2349205 D 526224 CDS YP_003634341.1 296127089 9143068 2350264..2350602 1 NC_014150.1 KEGG: bhy:BHWA1_02272 hypothetical protein; hypothetical protein 2350602 9143068 Bmur_2067 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634341.1 2350264 D 526224 CDS YP_003634342.1 296127090 9143069 complement(2350738..2351439) 1 NC_014150.1 KEGG: bhy:BHWA1_02273 hypothetical protein; hypothetical protein 2351439 9143069 Bmur_2068 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634342.1 2350738 R 526224 CDS YP_003634343.1 296127091 9143070 2351710..2352396 1 NC_014150.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: bhy:BHWA1_02274 potassium uptake protein TrkA; TrkA-N domain-containing protein 2352396 9143070 Bmur_2069 Brachyspira murdochii DSM 12563 TrkA-N domain-containing protein YP_003634343.1 2351710 D 526224 CDS YP_003634344.1 296127092 9143071 2352399..2352614 1 NC_014150.1 KEGG: bhy:BHWA1_02275 hypothetical protein; hypothetical protein 2352614 9143071 Bmur_2070 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634344.1 2352399 D 526224 CDS YP_003634345.1 296127093 9143072 2352823..2354514 1 NC_014150.1 KEGG: bhy:BHWA1_02285 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; glucose-1,6-bisphosphate synthase 2354514 9143072 Bmur_2071 Brachyspira murdochii DSM 12563 glucose-1,6-bisphosphate synthase YP_003634345.1 2352823 D 526224 CDS YP_003634346.1 296127094 9143073 complement(2354938..2357028) 1 NC_014150.1 KEGG: bhy:BHWA1_02283 RecG-like DNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 2357028 9143073 Bmur_2072 Brachyspira murdochii DSM 12563 DEAD/DEAH box helicase YP_003634346.1 2354938 R 526224 CDS YP_003634347.1 296127095 9143074 complement(2357051..2357530) 1 NC_014150.1 PFAM: protein of unknown function DUF1232; KEGG: bhy:BHWA1_02282 hypothetical protein; hypothetical protein 2357530 9143074 Bmur_2073 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634347.1 2357051 R 526224 CDS YP_003634348.1 296127096 9143075 2357673..2358431 1 NC_014150.1 PFAM: type IV pilus assembly PilZ; KEGG: bhy:BHWA1_02281 PilZ domain containing protein; type IV pilus assembly PilZ 2358431 9143075 Bmur_2074 Brachyspira murdochii DSM 12563 type IV pilus assembly PilZ YP_003634348.1 2357673 D 526224 CDS YP_003634349.1 296127097 9143076 2358412..2359017 1 NC_014150.1 KEGG: bhy:BHWA1_02280 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 2359017 9143076 Bmur_2075 Brachyspira murdochii DSM 12563 5-formyltetrahydrofolate cyclo-ligase YP_003634349.1 2358412 D 526224 CDS YP_003634350.1 296127098 9143077 complement(2359033..2359545) 1 NC_014150.1 KEGG: bhy:BHWA1_02278 chemotaxis signal transduction protein; PFAM: CheW domain protein; SMART: CheW domain protein; chemotaxis protein CheW 2359545 9143077 Bmur_2076 Brachyspira murdochii DSM 12563 chemotaxis protein CheW YP_003634350.1 2359033 R 526224 CDS YP_003634351.1 296127099 9143078 complement(2360284..2361468) 1 NC_014150.1 PFAM: sodium/hydrogen exchanger; KEGG: bhy:BHWA1_01437 Na(+)/H(+) antiporter; sodium/hydrogen exchanger 2361468 9143078 Bmur_2077 Brachyspira murdochii DSM 12563 sodium/hydrogen exchanger YP_003634351.1 2360284 R 526224 CDS YP_003634352.1 296127100 9143079 2361933..2363123 1 NC_014150.1 KEGG: uue:UUR10_0159 hypothetical protein; hypothetical protein 2363123 9143079 Bmur_2078 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634352.1 2361933 D 526224 CDS YP_003634353.1 296127101 9143080 2363144..2363866 1 NC_014150.1 KEGG: bhy:BHWA1_01635 hypothetical protein; hypothetical protein 2363866 9143080 Bmur_2079 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634353.1 2363144 D 526224 CDS YP_003634354.1 296127102 9143081 2363999..2366005 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_02162 ankyrin repeat- containing protein; ankyrin 2366005 9143081 Bmur_2080 Brachyspira murdochii DSM 12563 ankyrin YP_003634354.1 2363999 D 526224 CDS YP_003634355.1 296127103 9143082 2366188..2366517 1 NC_014150.1 PFAM: transcriptional regulator PadR family protein; KEGG: cbe:Cbei_3914 PadR-like family transcriptional regulator; PadR family transcriptional regulator 2366517 9143082 Bmur_2081 Brachyspira murdochii DSM 12563 PadR family transcriptional regulator YP_003634355.1 2366188 D 526224 CDS YP_003634356.1 296127104 9143083 2366541..2367185 1 NC_014150.1 KEGG: cbk:CLL_A2660 hypothetical protein; hypothetical protein 2367185 9143083 Bmur_2082 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634356.1 2366541 D 526224 CDS YP_003634357.1 296127105 9143084 2367189..2367845 1 NC_014150.1 KEGG: bhy:BHWA1_02360 hypothetical protein; hypothetical protein 2367845 9143084 Bmur_2083 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634357.1 2367189 D 526224 CDS YP_003634358.1 296127106 9143085 2367932..2368936 1 NC_014150.1 KEGG: bhy:BHWA1_02361 hypothetical protein; hypothetical protein 2368936 9143085 Bmur_2084 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634358.1 2367932 D 526224 CDS YP_003634359.1 296127107 9143086 2368957..2369616 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2369616 9143086 Bmur_2085 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634359.1 2368957 D 526224 CDS YP_003634360.1 296127108 9143087 2369651..2370373 1 NC_014150.1 KEGG: bhy:BHWA1_02363 hypothetical protein; hypothetical protein 2370373 9143087 Bmur_2086 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634360.1 2369651 D 526224 CDS YP_003634361.1 296127109 9143088 2370623..2371399 1 NC_014150.1 KEGG: bhy:BHWA1_02364 hypothetical protein; hypothetical protein 2371399 9143088 Bmur_2087 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634361.1 2370623 D 526224 CDS YP_003634362.1 296127110 9143089 2371402..2372076 1 NC_014150.1 KEGG: bhy:BHWA1_02365 ABC transporter ATP-binding protein YbbA; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2372076 9143089 Bmur_2088 Brachyspira murdochii DSM 12563 ABC transporter YP_003634362.1 2371402 D 526224 CDS YP_003634363.1 296127111 9143090 2372609..2373826 1 NC_014150.1 PFAM: protein of unknown function DUF214; KEGG: bhy:BHWA1_02366 hypothetical protein; hypothetical protein 2373826 9143090 Bmur_2089 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634363.1 2372609 D 526224 CDS YP_003634364.1 296127112 9143091 2373819..2374502 1 NC_014150.1 KEGG: bhy:BHWA1_02367 hypothetical protein; hypothetical protein 2374502 9143091 Bmur_2090 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634364.1 2373819 D 526224 CDS YP_003634365.1 296127113 9143092 2374510..2375568 1 NC_014150.1 KEGG: bhy:BHWA1_02368 hypothetical protein; hypothetical protein 2375568 9143092 Bmur_2091 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634365.1 2374510 D 526224 CDS YP_003634366.1 296127114 9143093 complement(2375871..2376302) 1 NC_014150.1 KEGG: bhy:BHWA1_02083 hypothetical protein; hypothetical protein 2376302 9143093 Bmur_2092 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634366.1 2375871 R 526224 CDS YP_003634367.1 296127115 9143094 2376621..2377622 1 NC_014150.1 PFAM: ApbE family lipoprotein; KEGG: bhy:BHWA1_02084 thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein 2377622 9143094 Bmur_2093 Brachyspira murdochii DSM 12563 ApbE family lipoprotein YP_003634367.1 2376621 D 526224 CDS YP_003634368.1 296127116 9143095 complement(2377623..2378192) 1 NC_014150.1 KEGG: bhy:BHWA1_02082 N6-adenine-specific methylase; TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase; methyltransferase 2378192 9143095 Bmur_2094 Brachyspira murdochii DSM 12563 methyltransferase YP_003634368.1 2377623 R 526224 CDS YP_003634369.1 296127117 9143096 complement(2378212..2378886) 1 NC_014150.1 KEGG: bhy:BHWA1_02081 hypothetical protein; hypothetical protein 2378886 9143096 Bmur_2095 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634369.1 2378212 R 526224 CDS YP_003634370.1 296127118 9143097 complement(2378979..2380139) 1 NC_014150.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: bhy:BHWA1_01510 homoserine O- acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 2380139 9143097 Bmur_2096 Brachyspira murdochii DSM 12563 homoserine O-acetyltransferase YP_003634370.1 2378979 R 526224 CDS YP_003634371.1 296127119 9143098 complement(2380218..2381513) 1 NC_014150.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bhy:BHWA1_01511 O-acetylhomoserine/O- acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 2381513 9143098 Bmur_2097 Brachyspira murdochii DSM 12563 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_003634371.1 2380218 R 526224 CDS YP_003634372.1 296127120 9143099 2382236..2382970 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_02198 ankyrin repeat- containing protein; ankyrin 2382970 9143099 Bmur_2098 Brachyspira murdochii DSM 12563 ankyrin YP_003634372.1 2382236 D 526224 CDS YP_003634373.1 296127121 9143100 complement(2383386..2384651) 1 NC_014150.1 PFAM: protein of unknown function UPF0027; KEGG: bhy:BHWA1_02202 hypothetical protein; hypothetical protein 2384651 9143100 Bmur_2099 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634373.1 2383386 R 526224 CDS YP_003634374.1 296127122 9143101 complement(2384815..2384976) 1 NC_014150.1 KEGG: bhy:BHWA1_02689 alpha-1,2- fucosyltransferase; glycosyl transferase, family 11; hypothetical protein 2384976 9143101 Bmur_2100 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634374.1 2384815 R 526224 CDS YP_003634375.1 296127123 9143102 complement(2385046..2385774) 1 NC_014150.1 PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_00827 glycosyl transferase, family 8; glycosyl transferase 2385774 9143102 Bmur_2101 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003634375.1 2385046 R 526224 CDS YP_003634376.1 296127124 9143103 2386011..2386919 1 NC_014150.1 KEGG: bhy:BHWA1_02201 D repair photolyase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2386919 9143103 Bmur_2102 Brachyspira murdochii DSM 12563 radical SAM protein YP_003634376.1 2386011 D 526224 CDS YP_003634377.1 296127125 9143104 2386982..2387122 1 NC_014150.1 KEGG: hit:NTHI1750 glycosyl transferase; hypothetical protein 2387122 9143104 Bmur_2103 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634377.1 2386982 D 526224 CDS YP_003634378.1 296127126 9143105 2387115..2388116 1 NC_014150.1 PFAM: glycosyl transferase 8; KEGG: bhy:BHWA1_02200 lipopolysaccharide 1,2-glucosyltransferase RfaJ; glycosyl transferase 2388116 9143105 Bmur_2104 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003634378.1 2387115 D 526224 CDS YP_003634379.1 296127127 9143106 2388734..2390908 1 NC_014150.1 KEGG: bhy:BHWA1_02203 fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar- specific permease EIIA 1 domain; phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose subfamily transporter subunit IIA 2390908 9143106 Bmur_2105 Brachyspira murdochii DSM 12563 PTS system glucose subfamily transporter subunit IIA YP_003634379.1 2388734 D 526224 CDS YP_003634380.1 296127128 9143107 2391130..2392935 1 NC_014150.1 KEGG: bhy:BHWA1_02204 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 2392935 9143107 Bmur_2106 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_003634380.1 2391130 D 526224 CDS YP_003634381.1 296127129 9143108 2393412..2394866 1 NC_014150.1 KEGG: bhy:BHWA1_02207 hypothetical protein; hypothetical protein 2394866 9143108 Bmur_2107 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634381.1 2393412 D 526224 CDS YP_003634382.1 296127130 9143109 complement(2394945..2395313) 1 NC_014150.1 PFAM: protein of unknown function DUF486; KEGG: bhy:BHWA1_02206 hypothetical protein; hypothetical protein 2395313 9143109 Bmur_2108 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634382.1 2394945 R 526224 CDS YP_003634383.1 296127131 9143110 2396748..2399882 1 NC_014150.1 PFAM: acriflavin resistance protein; KEGG: bhy:BHWA1_02310 acriflavin resistance protein; acriflavin resistance protein 2399882 9143110 Bmur_2109 Brachyspira murdochii DSM 12563 acriflavin resistance protein YP_003634383.1 2396748 D 526224 CDS YP_003634384.1 296127132 9143111 2399997..2400971 1 NC_014150.1 SMART: Rhodanese domain protein; KEGG: msu:MS1140 SseA protein; Rhodanese domain-containing protein 2400971 9143111 Bmur_2110 Brachyspira murdochii DSM 12563 Rhodanese domain-containing protein YP_003634384.1 2399997 D 526224 CDS YP_003634385.1 296127133 9143112 complement(2401025..2401474) 1 NC_014150.1 KEGG: cbf:CLI_1228 hypothetical protein; hypothetical protein 2401474 9143112 Bmur_2111 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634385.1 2401025 R 526224 CDS YP_003634386.1 296127134 9143113 complement(2401550..2402545) 1 NC_014150.1 KEGG: hor:Hore_04570 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 2402545 9143113 Bmur_2112 Brachyspira murdochii DSM 12563 LacI family transcriptional regulator YP_003634386.1 2401550 R 526224 CDS YP_003634387.1 296127135 9143114 2402734..2403798 1 NC_014150.1 PFAM: basic membrane lipoprotein; KEGG: basic membrane lipoprotein; basic membrane lipoprotein 2403798 9143114 Bmur_2113 Brachyspira murdochii DSM 12563 basic membrane lipoprotein YP_003634387.1 2402734 D 526224 CDS YP_003634388.1 296127136 9143115 2403906..2405426 1 NC_014150.1 KEGG: ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2405426 9143115 Bmur_2114 Brachyspira murdochii DSM 12563 ABC transporter YP_003634388.1 2403906 D 526224 CDS YP_003634389.1 296127137 9143116 2405465..2406526 1 NC_014150.1 PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; inner-membrane translocator 2406526 9143116 Bmur_2115 Brachyspira murdochii DSM 12563 inner-membrane translocator YP_003634389.1 2405465 D 526224 CDS YP_003634390.1 296127138 9143117 2406549..2407487 1 NC_014150.1 PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; inner-membrane translocator 2407487 9143117 Bmur_2116 Brachyspira murdochii DSM 12563 inner-membrane translocator YP_003634390.1 2406549 D 526224 CDS YP_003634391.1 296127139 9143118 2407543..2408475 1 NC_014150.1 KEGG: ribosylpyrimidine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase 2408475 9143118 Bmur_2117 Brachyspira murdochii DSM 12563 ribosylpyrimidine nucleosidase YP_003634391.1 2407543 D 526224 CDS YP_003634392.1 296127140 9143119 2408492..2409760 1 NC_014150.1 KEGG: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase 2409760 9143119 Bmur_2118 Brachyspira murdochii DSM 12563 acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase YP_003634392.1 2408492 D 526224 CDS YP_003634393.1 296127141 9143120 2409792..2410544 1 NC_014150.1 PFAM: protein of unknown function DUF1355; KEGG: protein of unknown function DUF1355; hypothetical protein 2410544 9143120 Bmur_2119 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634393.1 2409792 D 526224 CDS YP_003634394.1 296127142 9143121 2410558..2411430 1 NC_014150.1 PFAM: PfkB domain protein; KEGG: bhy:BHWA1_02311 ribokinase; PfkB domain-containing protein 2411430 9143121 Bmur_2120 Brachyspira murdochii DSM 12563 PfkB domain-containing protein YP_003634394.1 2410558 D 526224 CDS YP_003634395.1 296127143 9143122 2412561..2412788 1 NC_014150.1 KEGG: bhy:BHWA1_01157 hypothetical protein; hypothetical protein 2412788 9143122 Bmur_2121 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634395.1 2412561 D 526224 CDS YP_003634396.1 296127144 9143123 complement(2412747..2413730) 1 NC_014150.1 KEGG: bhy:BHWA1_01158 hypothetical protein; hypothetical protein 2413730 9143123 Bmur_2122 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634396.1 2412747 R 526224 CDS YP_003634397.1 296127145 9143124 complement(2413742..2414062) 1 NC_014150.1 KEGG: bhy:BHWA1_01159 hypothetical protein; hypothetical protein 2414062 9143124 Bmur_2123 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634397.1 2413742 R 526224 CDS YP_003634398.1 296127146 9143125 2414372..2414791 1 NC_014150.1 KEGG: bhy:BHWA1_01185 hypothetical protein; hypothetical protein 2414791 9143125 Bmur_2124 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634398.1 2414372 D 526224 CDS YP_003634399.1 296127147 9143126 complement(2415131..2416792) 1 NC_014150.1 KEGG: bhy:BHWA1_02387 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; formate--tetrahydrofolate ligase 2416792 9143126 Bmur_2125 Brachyspira murdochii DSM 12563 formate--tetrahydrofolate ligase YP_003634399.1 2415131 R 526224 CDS YP_003634400.1 296127148 9143127 2417030..2417992 1 NC_014150.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bhy:BHWA1_02386 Gfo/Idh/MocA family oxidoreductase; oxidoreductase domain-containing protein 2417992 9143127 Bmur_2126 Brachyspira murdochii DSM 12563 oxidoreductase domain-containing protein YP_003634400.1 2417030 D 526224 CDS YP_003634401.1 296127149 9143128 complement(2418112..2418885) 1 NC_014150.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: ere:EUBREC_2975 tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 2418885 9143128 Bmur_2127 Brachyspira murdochii DSM 12563 tryptophan synthase subunit alpha YP_003634401.1 2418112 R 526224 CDS YP_003634402.1 296127150 9143129 complement(2418878..2420062) 1 NC_014150.1 KEGG: ere:EUBREC_2976 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta 2420062 9143129 Bmur_2128 Brachyspira murdochii DSM 12563 tryptophan synthase subunit beta YP_003634402.1 2418878 R 526224 CDS YP_003634403.1 296127151 9143130 complement(2420052..2420705) 1 NC_014150.1 KEGG: rsd:TGRD_120 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 2420705 9143130 Bmur_2129 Brachyspira murdochii DSM 12563 phosphoribosylanthranilate isomerase YP_003634403.1 2420052 R 526224 CDS YP_003634404.1 296127152 9143131 complement(2420708..2421487) 1 NC_014150.1 KEGG: msi:Msm_1143 indole-3-glycerol-phosphate synthase; PFAM: indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase 2421487 9143131 Bmur_2130 Brachyspira murdochii DSM 12563 indole-3-glycerol phosphate synthase YP_003634404.1 2420708 R 526224 CDS YP_003634405.1 296127153 9143132 complement(2421509..2422531) 1 NC_014150.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: msi:Msm_1144 anthranilate phosphoribosyltransferase, TrpD; PFAM: glycosyl transferase 3; glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 2422531 9143132 Bmur_2131 Brachyspira murdochii DSM 12563 anthranilate phosphoribosyltransferase YP_003634405.1 2421509 R 526224 CDS YP_003634406.1 296127154 9143133 complement(2422695..2423279) 1 NC_014150.1 KEGG: ere:EUBREC_2979 anthranilate/para- aminobenzoate synthase component II, TrpG; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 2423279 9143133 Bmur_2132 Brachyspira murdochii DSM 12563 glutamine amidotransferase of anthranilate synthase YP_003634406.1 2422695 R 526224 CDS YP_003634407.1 296127155 9143134 complement(2423279..2424733) 1 NC_014150.1 KEGG: msi:Msm_1146 anthranilate/para-aminobenzoate synthase component I, TrpE; PFAM: Chorismate binding-like; anthranilate synthase component I domain protein; anthranilate synthase 2424733 9143134 Bmur_2133 Brachyspira murdochii DSM 12563 anthranilate synthase YP_003634407.1 2423279 R 526224 CDS YP_003634408.1 296127156 9143135 complement(2425115..2425981) 1 NC_014150.1 KEGG: bhy:BHWA1_02255 hypothetical protein; hypothetical protein 2425981 9143135 Bmur_2134 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634408.1 2425115 R 526224 CDS YP_003634409.1 296127157 9143136 complement(2425992..2427221) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 2427221 9143136 Bmur_2135 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634409.1 2425992 R 526224 CDS YP_003634410.1 296127158 9143137 complement(2427548..2429311) 1 NC_014150.1 KEGG: bhy:BHWA1_00985 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD subfamily RNA polymerase sigma-70 subunit 2429311 9143137 Bmur_2136 Brachyspira murdochii DSM 12563 RpoD subfamily RNA polymerase sigma-70 subunit YP_003634410.1 2427548 R 526224 CDS YP_003634411.1 296127159 9143138 complement(2429308..2431113) 1 NC_014150.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; KEGG: bhy:BHWA1_00986 DNA primase; SMART: Toprim sub domain protein; zinc finger CHC2- family protein; DNA primase 2431113 9143138 Bmur_2137 Brachyspira murdochii DSM 12563 DNA primase YP_003634411.1 2429308 R 526224 CDS YP_003634412.1 296127160 9143139 2431351..2432397 1 NC_014150.1 KEGG: bhy:BHWA1_00987 hypothetical protein; hypothetical protein 2432397 9143139 Bmur_2138 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634412.1 2431351 D 526224 CDS YP_003634413.1 296127161 9143140 2432381..2432947 1 NC_014150.1 PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_00988 NUDIX hydrolase; NUDIX hydrolase 2432947 9143140 Bmur_2139 Brachyspira murdochii DSM 12563 NUDIX hydrolase YP_003634413.1 2432381 D 526224 CDS YP_003634414.1 296127162 9143141 2432998..2433522 1 NC_014150.1 KEGG: bhy:BHWA1_00989 LepB, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; signal peptidase I 2433522 9143141 Bmur_2140 Brachyspira murdochii DSM 12563 signal peptidase I YP_003634414.1 2432998 D 526224 CDS YP_003634415.1 296127163 9143142 complement(2433578..2433907) 1 NC_014150.1 PFAM: branched-chain amino acid transport; KEGG: bhy:BHWA1_00990 branched-chain amino acid transport; branched-chain amino acid transport 2433907 9143142 Bmur_2141 Brachyspira murdochii DSM 12563 branched-chain amino acid transport YP_003634415.1 2433578 R 526224 CDS YP_003634416.1 296127164 9143143 complement(2433904..2434614) 1 NC_014150.1 PFAM: AzlC family protein; KEGG: bhy:BHWA1_00991 branched-chain amino acid transport; AzlC family protein 2434614 9143143 Bmur_2142 Brachyspira murdochii DSM 12563 AzlC family protein YP_003634416.1 2433904 R 526224 CDS YP_003634417.1 296127165 9143144 complement(2434695..2435432) 1 NC_014150.1 PFAM: CutC family protein; KEGG: bhy:BHWA1_00992 CutC family protein copper transport; CutC family protein 2435432 9143144 Bmur_2143 Brachyspira murdochii DSM 12563 CutC family protein YP_003634417.1 2434695 R 526224 CDS YP_003634418.1 296127166 9143145 2435545..2436636 1 NC_014150.1 KEGG: bhy:BHWA1_00993 hypothetical protein; hypothetical protein 2436636 9143145 Bmur_2144 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634418.1 2435545 D 526224 CDS YP_003634419.1 296127167 9143146 2436707..2437564 1 NC_014150.1 KEGG: bhy:BHWA1_00106 hypothetical protein; hypothetical protein 2437564 9143146 Bmur_2145 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634419.1 2436707 D 526224 CDS YP_003634420.1 296127168 9143147 complement(2438200..2438682) 1 NC_014150.1 manually curated; manually curated; KEGG: bhy:BHWA1_00995 glutathione peroxidase; Contains selenocysteine; PFAM: glutathione peroxidase; Contains selenocysteine; peroxiredoxin 2438682 9143147 Bmur_2146 Brachyspira murdochii DSM 12563 peroxiredoxin YP_003634420.1 2438200 R 526224 CDS YP_003634421.1 296127169 9143148 complement(2438798..2439295) 1 NC_014150.1 PFAM: redoxin domain protein; KEGG: bhy:BHWA1_00997 peroxiredoxin family, thiol peroxidase; redoxin domain protein 2439295 9143148 Bmur_2147 Brachyspira murdochii DSM 12563 redoxin domain protein YP_003634421.1 2438798 R 526224 CDS YP_003634422.1 296127170 9143149 complement(2439412..2440062) 1 NC_014150.1 PFAM: pseudouridine synthase; KEGG: bhy:BHWA1_00998 pseudouridine synthase, RsuA/RluD family; pseudouridine synthase 2440062 9143149 Bmur_2148 Brachyspira murdochii DSM 12563 pseudouridine synthase YP_003634422.1 2439412 R 526224 CDS YP_003634423.1 296127171 9143150 complement(2440074..2441807) 1 NC_014150.1 PFAM: protein of unknown function DUF115; KEGG: bhy:BHWA1_00999 hypothetical protein; hypothetical protein 2441807 9143150 Bmur_2149 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634423.1 2440074 R 526224 CDS YP_003634424.1 296127172 9143151 2441939..2442364 1 NC_014150.1 KEGG: bhy:BHWA1_01000 chemotaxis response regulator CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2442364 9143151 Bmur_2150 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003634424.1 2441939 D 526224 CDS YP_003634425.1 296127173 9143152 2442491..2444995 1 NC_014150.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: bhy:BHWA1_01001 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 2444995 9143152 Bmur_2151 Brachyspira murdochii DSM 12563 DNA gyrase subunit A YP_003634425.1 2442491 D 526224 CDS YP_003634426.1 296127174 9143153 2445263..2445613 1 NC_014150.1 KEGG: bhy:BHWA1_01002 hypothetical protein; hypothetical protein 2445613 9143153 Bmur_2152 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634426.1 2445263 D 526224 CDS YP_003634427.1 296127175 9143154 complement(2445616..2446290) 1 NC_014150.1 KEGG: bhy:BHWA1_01003 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2446290 9143154 Bmur_2153 Brachyspira murdochii DSM 12563 ABC transporter YP_003634427.1 2445616 R 526224 CDS YP_003634428.1 296127176 9143155 complement(2446287..2446850) 1 NC_014150.1 PFAM: protein of unknown function DUF214; KEGG: bhy:BHWA1_01004 hypothetical protein; hypothetical protein 2446850 9143155 Bmur_2154 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634428.1 2446287 R 526224 CDS YP_003634429.1 296127177 9143156 complement(2446975..2448063) 1 NC_014150.1 KEGG: bhy:BHWA1_02499 serine phosphatase RsbU, regulator of sigma subunit; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; Ser/Thr phosphatase 2448063 9143156 Bmur_2155 Brachyspira murdochii DSM 12563 Ser/Thr phosphatase YP_003634429.1 2446975 R 526224 CDS YP_003634430.1 296127178 9143157 2448240..2449136 1 NC_014150.1 PFAM: dihydrodipicolinate synthetase; KEGG: cdl:CDR20291_2139 N-acetylneuraminate lyase; dihydrodipicolinate synthetase 2449136 9143157 Bmur_2156 Brachyspira murdochii DSM 12563 dihydrodipicolinate synthetase YP_003634430.1 2448240 D 526224 CDS YP_003634431.1 296127179 9143158 2449211..2449675 1 NC_014150.1 PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_02500 hypothetical protein; hypothetical protein 2449675 9143158 Bmur_2157 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634431.1 2449211 D 526224 CDS YP_003634432.1 296127180 9143159 2450153..2451103 1 NC_014150.1 KEGG: bhy:BHWA1_02501 multimeric flavodoxin WrbA fused to cytochrome c-like domain; multimeric flavodoxin WrbA fused to cytochrome c- like domain 2451103 9143159 Bmur_2158 Brachyspira murdochii DSM 12563 multimeric flavodoxin WrbA fused to cytochrome c- like domain YP_003634432.1 2450153 D 526224 CDS YP_003634433.1 296127181 9143160 complement(2451190..2452938) 1 NC_014150.1 TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; KEGG: bhy:BHWA1_02502 [Fe] hydrogenase, large subunit HymC; SMART: iron hydrogenase small subunit; hydrogenase, Fe-only 2452938 9143160 Bmur_2159 Brachyspira murdochii DSM 12563 hydrogenase, Fe-only YP_003634433.1 2451190 R 526224 CDS YP_003634434.1 296127182 9143161 complement(2452968..2454656) 1 NC_014150.1 KEGG: bhy:BHWA1_02503 DH:ubiquinone oxidoreductase, DH-binding (51 kDa) subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 2454656 9143161 Bmur_2160 Brachyspira murdochii DSM 12563 NADH dehydrogenase (quinone) YP_003634434.1 2452968 R 526224 CDS YP_003634435.1 296127183 9143162 complement(2454668..2455159) 1 NC_014150.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bhy:BHWA1_02504 DH:ubiquinone oxidoreductase 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 2455159 9143162 Bmur_2161 Brachyspira murdochii DSM 12563 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_003634435.1 2454668 R 526224 CDS YP_003634436.1 296127184 9143163 complement(2455424..2456302) 1 NC_014150.1 KEGG: bhy:BHWA1_02505 hypothetical protein; hypothetical protein 2456302 9143163 Bmur_2162 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634436.1 2455424 R 526224 CDS YP_003634437.1 296127185 9143164 complement(2456355..2457461) 1 NC_014150.1 KEGG: bhy:BHWA1_02506 hypothetical protein; hypothetical protein 2457461 9143164 Bmur_2163 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634437.1 2456355 R 526224 CDS YP_003634438.1 296127186 9143165 complement(2457615..2457827) 1 NC_014150.1 KEGG: sag:SAG2013 hypothetical protein; hypothetical protein 2457827 9143165 Bmur_2164 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634438.1 2457615 R 526224 CDS YP_003634439.1 296127187 9143167 complement(2458233..2459570) 1 NC_014150.1 SMART: AAA ATPase; KEGG: bhy:BHWA1_02508 hypothetical protein; ATPase AAA 2459570 9143167 Bmur_2166 Brachyspira murdochii DSM 12563 ATPase AAA YP_003634439.1 2458233 R 526224 CDS YP_003634440.1 296127188 9143168 2459748..2461277 1 NC_014150.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: bhy:BHWA1_02509 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2461277 9143168 Bmur_2167 Brachyspira murdochii DSM 12563 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_003634440.1 2459748 D 526224 CDS YP_003634441.1 296127189 9143169 complement(2461798..2462208) 1 NC_014150.1 KEGG: bhy:BHWA1_02510 rhodanese homology domain (RHOD) superfamily protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein 2462208 9143169 Bmur_2168 Brachyspira murdochii DSM 12563 Rhodanese domain-containing protein YP_003634441.1 2461798 R 526224 CDS YP_003634442.1 296127190 9143170 complement(2462293..2462955) 1 NC_014150.1 PFAM: TENA/THI-4 domain protein; KEGG: bhy:BHWA1_02511 transcription activator; TenA family transcriptional regulator 2462955 9143170 Bmur_2169 Brachyspira murdochii DSM 12563 TenA family transcriptional regulator YP_003634442.1 2462293 R 526224 CDS YP_003634443.1 296127191 9143171 complement(2463023..2464630) 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02512 OppA, ABC-type oligopeptide transport system, periplasmic component; ABC transporter substrate-binding protein 2464630 9143171 Bmur_2170 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634443.1 2463023 R 526224 CDS YP_003634444.1 296127192 9143172 complement(2464952..2465923) 1 NC_014150.1 KEGG: bhy:BHWA1_01695 hypothetical protein; hypothetical protein 2465923 9143172 Bmur_2171 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634444.1 2464952 R 526224 CDS YP_003634445.1 296127193 9143173 2466186..2467661 1 NC_014150.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: bhy:BHWA1_02519 alginate O-acetylation protein; membrane bound O-acyl transferase MBOAT family protein 2467661 9143173 Bmur_2172 Brachyspira murdochii DSM 12563 membrane bound O-acyl transferase MBOAT family protein YP_003634445.1 2466186 D 526224 CDS YP_003634446.1 296127194 9143174 2467676..2469100 1 NC_014150.1 KEGG: bhy:BHWA1_02522 hypothetical protein; hypothetical protein 2469100 9143174 Bmur_2173 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634446.1 2467676 D 526224 CDS YP_003634447.1 296127195 9143175 complement(2469193..2470890) 1 NC_014150.1 KEGG: mmo:MMOB5130 hypothetical protein; hypothetical protein 2470890 9143175 Bmur_2174 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634447.1 2469193 R 526224 CDS YP_003634448.1 296127196 9143176 2471028..2472503 1 NC_014150.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: bhy:BHWA1_02519 alginate O-acetylation protein; membrane bound O-acyl transferase MBOAT family protein 2472503 9143176 Bmur_2175 Brachyspira murdochii DSM 12563 membrane bound O-acyl transferase MBOAT family protein YP_003634448.1 2471028 D 526224 CDS YP_003634449.1 296127197 9143177 2473096..2474526 1 NC_014150.1 KEGG: bhy:BHWA1_02522 hypothetical protein; hypothetical protein 2474526 9143177 Bmur_2176 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634449.1 2473096 D 526224 CDS YP_003634450.1 296127198 9143178 2474696..2475268 1 NC_014150.1 KEGG: bhy:BHWA1_01139 hypothetical protein; hypothetical protein 2475268 9143178 Bmur_2177 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634450.1 2474696 D 526224 CDS YP_003634451.1 296127199 9143179 2475567..2476508 1 NC_014150.1 KEGG: bhy:BHWA1_01296 hypothetical protein; hypothetical protein 2476508 9143179 Bmur_2178 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634451.1 2475567 D 526224 CDS YP_003634452.1 296127200 9143180 2476640..2477041 1 NC_014150.1 KEGG: bhy:BHWA1_02523 hypothetical protein; hypothetical protein 2477041 9143180 Bmur_2179 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634452.1 2476640 D 526224 CDS YP_003634453.1 296127201 9143181 2477093..2477473 1 NC_014150.1 KEGG: bhy:BHWA1_02524 hypothetical protein; hypothetical protein 2477473 9143181 Bmur_2180 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634453.1 2477093 D 526224 CDS YP_003634454.1 296127202 9143182 2477702..2479330 1 NC_014150.1 SMART: von Willebrand factor type A; KEGG: bhy:BHWA1_01140 hypothetical protein; von Willebrand factor A 2479330 9143182 Bmur_2181 Brachyspira murdochii DSM 12563 von Willebrand factor A YP_003634454.1 2477702 D 526224 CDS YP_003634455.1 296127203 9143183 complement(2480670..2481470) 1 NC_014150.1 KEGG: bhy:BHWA1_02435 haloacid dehalogenase-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 2481470 9143183 Bmur_2182 Brachyspira murdochii DSM 12563 cof family hydrolase YP_003634455.1 2480670 R 526224 CDS YP_003634456.1 296127204 9143184 complement(2481558..2485316) 1 NC_014150.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: bhy:BHWA1_02433 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase 2485316 9143184 Bmur_2183 Brachyspira murdochii DSM 12563 phosphoribosylformylglycinamidine synthase YP_003634456.1 2481558 R 526224 CDS YP_003634457.1 296127205 9143185 2485557..2485940 1 NC_014150.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fph:Fphi_0487 glyoxalase; bleomycin resistance protein 2485940 9143185 Bmur_2184 Brachyspira murdochii DSM 12563 bleomycin resistance protein YP_003634457.1 2485557 D 526224 CDS YP_003634458.1 296127206 9143186 2485951..2487642 1 NC_014150.1 PFAM: amidohydrolase; KEGG: bhy:BHWA1_02431 metal dependent amidohydrolase; amidohydrolase 2487642 9143186 Bmur_2185 Brachyspira murdochii DSM 12563 amidohydrolase YP_003634458.1 2485951 D 526224 CDS YP_003634459.1 296127207 9143187 2487724..2488506 1 NC_014150.1 PFAM: protein of unknown function DUF147; KEGG: bhy:BHWA1_01167 hypothetical protein; hypothetical protein 2488506 9143187 Bmur_2186 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634459.1 2487724 D 526224 CDS YP_003634460.1 296127208 9143188 2488503..2489504 1 NC_014150.1 PFAM: YbbR family protein; KEGG: bhy:BHWA1_01168 hypothetical protein; hypothetical protein 2489504 9143188 Bmur_2187 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634460.1 2488503 D 526224 CDS YP_003634461.1 296127209 9143189 2489508..2489870 1 NC_014150.1 KEGG: bhy:BHWA1_01169 hypothetical protein; hypothetical protein 2489870 9143189 Bmur_2188 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634461.1 2489508 D 526224 CDS YP_003634462.1 296127210 9143190 2489880..2490410 1 NC_014150.1 PFAM: Heptaprenyl diphosphate synthase component I; KEGG: bhy:BHWA1_01170 hypothetical protein; heptaprenyl diphosphate synthase component I 2490410 9143190 Bmur_2189 Brachyspira murdochii DSM 12563 heptaprenyl diphosphate synthase component I YP_003634462.1 2489880 D 526224 CDS YP_003634463.1 296127211 9143191 complement(2490415..2492163) 1 NC_014150.1 KEGG: bhy:BHWA1_02437 hypothetical protein; hypothetical protein 2492163 9143191 Bmur_2190 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634463.1 2490415 R 526224 CDS YP_003634464.1 296127212 9143192 2492350..2493135 1 NC_014150.1 KEGG: bhy:BHWA1_02453 hypothetical protein; hypothetical protein 2493135 9143192 Bmur_2191 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634464.1 2492350 D 526224 CDS YP_003634465.1 296127213 9143193 2493184..2493957 1 NC_014150.1 KEGG: bhy:BHWA1_02454 hypothetical protein; hypothetical protein 2493957 9143193 Bmur_2192 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634465.1 2493184 D 526224 CDS YP_003634466.1 296127214 9143194 2493973..2494779 1 NC_014150.1 KEGG: bhy:BHWA1_02455 hypothetical protein; hypothetical protein 2494779 9143194 Bmur_2193 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634466.1 2493973 D 526224 CDS YP_003634467.1 296127215 9143195 2494788..2495633 1 NC_014150.1 KEGG: bhy:BHWA1_02456 hypothetical protein; hypothetical protein 2495633 9143195 Bmur_2194 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634467.1 2494788 D 526224 CDS YP_003634468.1 296127216 9143196 complement(2495709..2496146) 1 NC_014150.1 KEGG: bhy:BHWA1_02438 hypothetical protein; hypothetical protein 2496146 9143196 Bmur_2195 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634468.1 2495709 R 526224 CDS YP_003634469.1 296127217 9143197 complement(2496374..2496811) 1 NC_014150.1 KEGG: bhy:BHWA1_02438 hypothetical protein; hypothetical protein 2496811 9143197 Bmur_2196 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634469.1 2496374 R 526224 CDS YP_003634470.1 296127218 9143198 2497069..2497308 1 NC_014150.1 KEGG: bhy:BHWA1_02440 hypothetical protein; hypothetical protein 2497308 9143198 Bmur_2197 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634470.1 2497069 D 526224 CDS YP_003634471.1 296127219 9143199 complement(2497345..2497818) 1 NC_014150.1 KEGG: bhy:BHWA1_02441 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2497818 9143199 Bmur_2198 Brachyspira murdochii DSM 12563 ankyrin YP_003634471.1 2497345 R 526224 CDS YP_003634472.1 296127220 9143200 complement(2497888..2499339) 1 NC_014150.1 KEGG: bhy:BHWA1_02442 fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region; dihydroxyacetone kinase, phosphotransfer subunit 2499339 9143200 Bmur_2199 Brachyspira murdochii DSM 12563 dihydroxyacetone kinase, phosphotransfer subunit YP_003634472.1 2497888 R 526224 CDS YP_003634473.1 296127221 9143201 complement(2499377..2499991) 1 NC_014150.1 KEGG: bhy:BHWA1_02443 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; dihydroxyacetone kinase subunit DhaL 2499991 9143201 Bmur_2200 Brachyspira murdochii DSM 12563 dihydroxyacetone kinase subunit DhaL YP_003634473.1 2499377 R 526224 CDS YP_003634474.1 296127222 9143202 complement(2500026..2501021) 1 NC_014150.1 TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: bhy:BHWA1_02444 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase; dihydroxyacetone kinase subunit DhaK 2501021 9143202 Bmur_2201 Brachyspira murdochii DSM 12563 dihydroxyacetone kinase subunit DhaK YP_003634474.1 2500026 R 526224 CDS YP_003634475.1 296127223 9143203 2501299..2502024 1 NC_014150.1 PFAM: PBS lyase HEAT domain protein repeat- containing protein; KEGG: bhy:BHWA1_02445 hypothetical protein; PBS lyase HEAT domain-containing protein repeat-containing protein 2502024 9143203 Bmur_2202 Brachyspira murdochii DSM 12563 PBS lyase HEAT domain-containing protein repeat-containing protein YP_003634475.1 2501299 D 526224 CDS YP_003634476.1 296127224 9143204 2502428..2503438 1 NC_014150.1 KEGG: bhy:BHWA1_02446 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2503438 9143204 Bmur_2203 Brachyspira murdochii DSM 12563 ABC transporter YP_003634476.1 2502428 D 526224 CDS YP_003634477.1 296127225 9143205 2503455..2504162 1 NC_014150.1 KEGG: bhy:BHWA1_02447 ABC-type transport system involved in multi-copper enzyme maturation, permease component; copper ABC transporter permease 2504162 9143205 Bmur_2204 Brachyspira murdochii DSM 12563 copper ABC transporter permease YP_003634477.1 2503455 D 526224 CDS YP_003634478.1 296127226 9143206 2504196..2504771 1 NC_014150.1 KEGG: bhy:BHWA1_02448 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2504771 9143206 Bmur_2205 Brachyspira murdochii DSM 12563 ankyrin YP_003634478.1 2504196 D 526224 CDS YP_003634479.1 296127227 9143207 2505018..2506010 1 NC_014150.1 TIGRFAM: ferrochelatase; KEGG: bhy:BHWA1_00920 ferrochelatase; PFAM: ferrochelatase; ferrochelatase 2506010 9143207 Bmur_2206 Brachyspira murdochii DSM 12563 ferrochelatase YP_003634479.1 2505018 D 526224 CDS YP_003634480.1 296127228 9143208 2506185..2511935 1 NC_014150.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2- macroglobulin domain protein 2; alpha-2-macroglobulin; KEGG: bhy:BHWA1_00921 alpha-2- macroglobulin domain protein; alpha-2-macroglobulin 2511935 9143208 Bmur_2207 Brachyspira murdochii DSM 12563 alpha-2-macroglobulin YP_003634480.1 2506185 D 526224 CDS YP_003634481.1 296127229 9143209 2512288..2512722 1 NC_014150.1 KEGG: bhy:BHWA1_01058 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2512722 9143209 Bmur_2208 Brachyspira murdochii DSM 12563 ankyrin YP_003634481.1 2512288 D 526224 CDS YP_003634482.1 296127230 9143210 2512883..2513365 1 NC_014150.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_01054 heat shock protein; hypothetical protein 2513365 9143210 Bmur_2209 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634482.1 2512883 D 526224 CDS YP_003634483.1 296127231 9143211 2513552..2514142 1 NC_014150.1 KEGG: bhy:BHWA1_01053 lipoprotein; lipoprotein 2514142 9143211 Bmur_2210 Brachyspira murdochii DSM 12563 lipoprotein YP_003634483.1 2513552 D 526224 CDS YP_003634484.1 296127232 9143212 2514205..2515707 1 NC_014150.1 KEGG: bhy:BHWA1_01052 outer membrane protein (TmpB); PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; peptidoglycan-binding lysin domain protein 2515707 9143212 Bmur_2211 Brachyspira murdochii DSM 12563 peptidoglycan-binding lysin domain protein YP_003634484.1 2514205 D 526224 CDS YP_003634485.1 296127233 9143213 2515789..2516364 1 NC_014150.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bhy:BHWA1_01051 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase 2516364 9143213 Bmur_2212 Brachyspira murdochii DSM 12563 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_003634485.1 2515789 D 526224 CDS YP_003634486.1 296127234 9143214 2516389..2516877 1 NC_014150.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bhy:BHWA1_01050 peptidyl-prolyl cis-trans isomerase A; cyclophilin type peptidyl-prolyl cis-trans isomerase 2516877 9143214 Bmur_2213 Brachyspira murdochii DSM 12563 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_003634486.1 2516389 D 526224 CDS YP_003634487.1 296127235 9143215 complement(2516956..2518380) 1 NC_014150.1 PFAM: sodium/glutamate symporter; KEGG: bhy:BHWA1_01049 sodium/glutamate symporter; sodium/glutamate symporter 2518380 9143215 Bmur_2214 Brachyspira murdochii DSM 12563 sodium/glutamate symporter YP_003634487.1 2516956 R 526224 CDS YP_003634488.1 296127236 9143216 complement(2518414..2519220) 1 NC_014150.1 PFAM: protein of unknown function DUF218; KEGG: bhy:BHWA1_01048 hypothetical protein; hypothetical protein 2519220 9143216 Bmur_2215 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634488.1 2518414 R 526224 CDS YP_003634489.1 296127237 9143217 2519645..2521318 1 NC_014150.1 KEGG: bhy:BHWA1_01047 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; acetolactate synthase large subunit 2521318 9143217 Bmur_2216 Brachyspira murdochii DSM 12563 acetolactate synthase large subunit YP_003634489.1 2519645 D 526224 CDS YP_003634490.1 296127238 9143218 2521338..2521865 1 NC_014150.1 KEGG: bhy:BHWA1_01046 acetolactate synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit 2521865 9143218 Bmur_2217 Brachyspira murdochii DSM 12563 acetolactate synthase small subunit YP_003634490.1 2521338 D 526224 CDS YP_003634491.1 296127239 9143219 2521903..2522898 1 NC_014150.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: bhy:BHWA1_01045 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 2522898 9143219 Bmur_2218 Brachyspira murdochii DSM 12563 ketol-acid reductoisomerase YP_003634491.1 2521903 D 526224 CDS YP_003634492.1 296127240 9143220 2523230..2524729 1 NC_014150.1 KEGG: bhy:BHWA1_01044 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase 2524729 9143220 Bmur_2219 Brachyspira murdochii DSM 12563 2-isopropylmalate synthase YP_003634492.1 2523230 D 526224 CDS YP_003634493.1 296127241 9143221 2524800..2526047 1 NC_014150.1 KEGG: bhy:BHWA1_01043 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit 2526047 9143221 Bmur_2220 Brachyspira murdochii DSM 12563 3-isopropylmalate dehydratase large subunit YP_003634493.1 2524800 D 526224 CDS YP_003634494.1 296127242 9143222 2526092..2526580 1 NC_014150.1 KEGG: bhy:BHWA1_01042 3-isopropylmalate dehydratase; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 2526580 9143222 Bmur_2221 Brachyspira murdochii DSM 12563 3-isopropylmalate dehydratase small subunit YP_003634494.1 2526092 D 526224 CDS YP_003634495.1 296127243 9143223 2526587..2527675 1 NC_014150.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: bhy:BHWA1_01041 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2527675 9143223 Bmur_2222 Brachyspira murdochii DSM 12563 3-isopropylmalate dehydrogenase YP_003634495.1 2526587 D 526224 CDS YP_003634496.1 296127244 9143224 2527819..2528055 1 NC_014150.1 KEGG: bhy:BHWA1_01040 hypothetical protein; hypothetical protein 2528055 9143224 Bmur_2223 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634496.1 2527819 D 526224 CDS YP_003634497.1 296127245 9143225 2528048..2528758 1 NC_014150.1 PFAM: protein of unknown function DUF152; KEGG: bhy:BHWA1_01039 hypothetical protein; hypothetical protein 2528758 9143225 Bmur_2224 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634497.1 2528048 D 526224 CDS YP_003634498.1 296127246 9143226 2529194..2529349 1 NC_014150.1 KEGG: bhy:BHWA1_02577 hypothetical protein; hypothetical protein 2529349 9143226 Bmur_2225 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634498.1 2529194 D 526224 CDS YP_003634499.1 296127247 9143227 2529784..2530854 1 NC_014150.1 TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; KEGG: bhy:BHWA1_01163 4-hydroxy-3-methylbut-2-en-1- yl diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2530854 9143227 Bmur_2226 Brachyspira murdochii DSM 12563 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_003634499.1 2529784 D 526224 CDS YP_003634500.1 296127248 9143228 2531515..2531985 1 NC_014150.1 KEGG: bhy:BHWA1_02393 effector-binding domain containing protein; PFAM: transcription activator effector binding; SMART: transcription activator effector binding; transcription activator effector binding protein 2531985 9143228 Bmur_2227 Brachyspira murdochii DSM 12563 transcription activator effector binding protein YP_003634500.1 2531515 D 526224 CDS YP_003634501.1 296127249 9143229 2532026..2532619 1 NC_014150.1 KEGG: bhy:BHWA1_02392 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 2532619 9143229 Bmur_2228 Brachyspira murdochii DSM 12563 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_003634501.1 2532026 D 526224 CDS YP_003634502.1 296127250 9143230 2533015..2533539 1 NC_014150.1 KEGG: bhy:BHWA1_02391 hypothetical protein; hypothetical protein 2533539 9143230 Bmur_2229 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634502.1 2533015 D 526224 CDS YP_003634503.1 296127251 9143231 2533574..2535241 1 NC_014150.1 PFAM: carbon starvation protein CstA; KEGG: bhy:BHWA1_02390 carbon starvation protein CstA; carbon starvation protein CstA 2535241 9143231 Bmur_2230 Brachyspira murdochii DSM 12563 carbon starvation protein CstA YP_003634503.1 2533574 D 526224 CDS YP_003634504.1 296127252 9143232 2535342..2535806 1 NC_014150.1 KEGG: bhy:BHWA1_02389 hypothetical protein; hypothetical protein 2535806 9143232 Bmur_2231 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634504.1 2535342 D 526224 CDS YP_003634505.1 296127253 9143233 2535855..2538695 1 NC_014150.1 KEGG: bhy:BHWA1_02388 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 2538695 9143233 Bmur_2232 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634505.1 2535855 D 526224 CDS YP_003634506.1 296127254 9143234 complement(2539198..2539521) 1 NC_014150.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_01135 cupin domain containing protein; cupin 2539521 9143234 Bmur_2233 Brachyspira murdochii DSM 12563 cupin YP_003634506.1 2539198 R 526224 CDS YP_003634507.1 296127255 9143235 complement(2539611..2542295) 1 NC_014150.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: bhy:BHWA1_01134 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS 2542295 9143235 Bmur_2234 Brachyspira murdochii DSM 12563 DNA mismatch repair protein MutS YP_003634507.1 2539611 R 526224 CDS YP_003634508.1 296127256 9143236 complement(2542442..2543233) 1 NC_014150.1 KEGG: bhy:BHWA1_01130 hypothetical protein; hypothetical protein 2543233 9143236 Bmur_2235 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634508.1 2542442 R 526224 CDS YP_003634509.1 296127257 9143237 complement(2543307..2544266) 1 NC_014150.1 KEGG: bhy:BHWA1_01128 ankyrin repeat-containing protein; hypothetical protein 2544266 9143237 Bmur_2236 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634509.1 2543307 R 526224 CDS YP_003634510.1 296127258 9143238 complement(2544319..2544777) 1 NC_014150.1 KEGG: bhy:BHWA1_01123 hypothetical protein; hypothetical protein 2544777 9143238 Bmur_2237 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634510.1 2544319 R 526224 CDS YP_003634511.1 296127259 9143239 2544916..2546520 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01813 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 2546520 9143239 Bmur_2238 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634511.1 2544916 D 526224 CDS YP_003634512.1 296127260 9143240 2546999..2547190 1 NC_014150.1 KEGG: bhy:BHWA1_00901 CCAAT-box DNA binding protein subunit B; CCAAT-box DNA binding protein subunit B 2547190 9143240 Bmur_2239 Brachyspira murdochii DSM 12563 CCAAT-box DNA binding protein subunit B YP_003634512.1 2546999 D 526224 CDS YP_003634513.1 296127261 9143241 2547308..2548924 1 NC_014150.1 TIGRFAM: CTP synthase; KEGG: bhy:BHWA1_00899 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 2548924 9143241 Bmur_2240 Brachyspira murdochii DSM 12563 CTP synthase YP_003634513.1 2547308 D 526224 CDS YP_003634514.1 296127262 9143242 complement(2549069..2549587) 1 NC_014150.1 TIGRFAM: deoxycytidine triphosphate deaminase; KEGG: bhy:BHWA1_01136 deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 2549587 9143242 Bmur_2241 Brachyspira murdochii DSM 12563 deoxycytidine triphosphate deaminase YP_003634514.1 2549069 R 526224 CDS YP_003634515.1 296127263 9143243 2549699..2551030 1 NC_014150.1 KEGG: bhy:BHWA1_01137 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase 2551030 9143243 Bmur_2242 Brachyspira murdochii DSM 12563 glucose-6-phosphate isomerase YP_003634515.1 2549699 D 526224 CDS YP_003634516.1 296127264 9143244 complement(2551088..2551753) 1 NC_014150.1 KEGG: bhy:BHWA1_01143 hypothetical protein; hypothetical protein 2551753 9143244 Bmur_2243 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634516.1 2551088 R 526224 CDS YP_003634517.1 296127265 9143245 complement(2551780..2553900) 1 NC_014150.1 KEGG: bhy:BHWA1_01144 alpha-amylase 1 (1,4-alpha-D- glucan glucanohydrolase); PFAM: glycoside hydrolase 57; Domain of unknown function DUF1925; Domain of unknown function DUF1926; 4-alpha-glucanotransferase 2553900 9143245 Bmur_2244 Brachyspira murdochii DSM 12563 4-alpha-glucanotransferase YP_003634517.1 2551780 R 526224 CDS YP_003634518.1 296127266 9143246 2554136..2555959 1 NC_014150.1 KEGG: bhy:BHWA1_01145 glucosamine--fructose-6- phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; glucosamine/fructose-6-phosphate aminotransferase 2555959 9143246 Bmur_2245 Brachyspira murdochii DSM 12563 glucosamine/fructose-6-phosphate aminotransferase YP_003634518.1 2554136 D 526224 CDS YP_003634519.1 296127267 9143247 complement(2557495..2558643) 1 NC_014150.1 PFAM: integrase; KEGG: mth:MTH893 integrase-recombinase; integrase 2558643 9143247 Bmur_2246 Brachyspira murdochii DSM 12563 integrase YP_003634519.1 2557495 R 526224 CDS YP_003634520.1 296127268 9143248 2558824..2559582 1 NC_014150.1 TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: ckr:CKR_P20 hypothetical protein; SMART: Exonuclease; DNA polymerase III subunit epsilon 2559582 9143248 Bmur_2247 Brachyspira murdochii DSM 12563 DNA polymerase III subunit epsilon YP_003634520.1 2558824 D 526224 CDS YP_003634521.1 296127269 9143249 2560057..2560242 1 NC_014150.1 KEGG: amsh-lp; associated molecule with the SH3 domain of STAM (AMSH) like protein; K11867 AMSH-like protease; STAM (AMSH)-SH3 domain associated-like protein 2560242 9143249 Bmur_2248 Brachyspira murdochii DSM 12563 STAM (AMSH)-SH3 domain associated-like protein YP_003634521.1 2560057 D 526224 CDS YP_003634522.1 296127270 9143250 complement(2560475..2560699) 1 NC_014150.1 KEGG: ote:Oter_2697 hypothetical protein; hypothetical protein 2560699 9143250 Bmur_2249 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634522.1 2560475 R 526224 CDS YP_003634523.1 296127271 9143251 complement(2560849..2561058) 1 NC_014150.1 KEGG: vvy:VV1710 small-conductance mechanosensitive channel; hypothetical protein 2561058 9143251 Bmur_2250 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634523.1 2560849 R 526224 CDS YP_003634524.1 296127272 9143252 complement(2561074..2561565) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2561565 9143252 Bmur_2251 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634524.1 2561074 R 526224 CDS YP_003634525.1 296127273 9143253 complement(2561578..2562477) 1 NC_014150.1 KEGG: Hypothetical protein CBG04117; hypothetical protein 2562477 9143253 Bmur_2252 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634525.1 2561578 R 526224 CDS YP_003634526.1 296127274 9143254 complement(2562558..2563097) 1 NC_014150.1 KEGG: wbr:WGLp481 hypothetical protein; hypothetical protein 2563097 9143254 Bmur_2253 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634526.1 2562558 R 526224 CDS YP_003634527.1 296127275 9143255 complement(2563234..2563671) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2563671 9143255 Bmur_2254 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634527.1 2563234 R 526224 CDS YP_003634528.1 296127276 9143256 complement(2563676..2564269) 1 NC_014150.1 PFAM: glycoside hydrolase 19; KEGG: bhy:BHWA1_01853 Lys - endolysin; glycoside hydrolase; glycoside hydrolase 19 2564269 9143256 Bmur_2255 Brachyspira murdochii DSM 12563 glycoside hydrolase 19 YP_003634528.1 2563676 R 526224 CDS YP_003634529.1 296127277 9143257 complement(2564375..2564716) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2564716 9143257 Bmur_2256 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634529.1 2564375 R 526224 CDS YP_003634530.1 296127278 9143258 complement(2564790..2565179) 1 NC_014150.1 PFAM: Sigma-70 region 4 type 2; KEGG: bhy:BHWA1_00983 hypothetical protein; response regulator receiver protein 2565179 9143258 Bmur_2257 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003634530.1 2564790 R 526224 CDS YP_003634531.1 296127279 9143260 complement(2565387..2567351) 1 NC_014150.1 KEGG: bhy:BHWA1_00453 hypothetical protein; hypothetical protein 2567351 9143260 Bmur_2259 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634531.1 2565387 R 526224 CDS YP_003634532.1 296127280 9143261 complement(2567364..2568500) 1 NC_014150.1 KEGG: mbo:Mb3541 PE-PGRS family protein; hypothetical protein 2568500 9143261 Bmur_2260 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634532.1 2567364 R 526224 CDS YP_003634533.1 296127281 9143262 complement(2568606..2569061) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2569061 9143262 Bmur_2261 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634533.1 2568606 R 526224 CDS YP_003634534.1 296127282 9143263 complement(2569061..2569957) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2569957 9143263 Bmur_2262 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634534.1 2569061 R 526224 CDS YP_003634535.1 296127283 9143264 complement(2569954..2573424) 1 NC_014150.1 KEGG: hau:Haur_1369 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 2573424 9143264 Bmur_2263 Brachyspira murdochii DSM 12563 phage tail tape measure protein, TP901 family YP_003634535.1 2569954 R 526224 CDS YP_003634536.1 296127284 9143265 complement(2573514..2573702) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2573702 9143265 Bmur_2264 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634536.1 2573514 R 526224 CDS YP_003634537.1 296127285 9143266 complement(2573768..2574115) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2574115 9143266 Bmur_2265 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634537.1 2573768 R 526224 CDS YP_003634538.1 296127286 9143267 complement(2574127..2575530) 1 NC_014150.1 KEGG: mac:MA3808 hypothetical protein; hypothetical protein 2575530 9143267 Bmur_2266 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634538.1 2574127 R 526224 CDS YP_003634539.1 296127287 9143268 complement(2575565..2575936) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 2575936 9143268 Bmur_2267 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634539.1 2575565 R 526224 CDS YP_003634540.1 296127288 9143269 complement(2575948..2576406) 1 NC_014150.1 TIGRFAM: phage protein, HK97 gp10 family; KEGG: ATP-dependent RNA helicase; phage protein, HK97 gp10 family 2576406 9143269 Bmur_2268 Brachyspira murdochii DSM 12563 phage protein, HK97 gp10 family YP_003634540.1 2575948 R 526224 CDS YP_003634541.1 296127289 9143270 complement(2576408..2576761) 1 NC_014150.1 TIGRFAM: phage head-tail adaptor; KEGG: cby:CLM_3411 DNA polymerase I; phage head-tail adaptor 2576761 9143270 Bmur_2269 Brachyspira murdochii DSM 12563 phage head-tail adaptor YP_003634541.1 2576408 R 526224 CDS YP_003634542.1 296127290 9143271 complement(2576829..2577269) 1 NC_014150.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: rsp:RSP_6247 phage-related protein, DNA packing; DNA packaging phage protein 2577269 9143271 Bmur_2270 Brachyspira murdochii DSM 12563 DNA packaging phage protein YP_003634542.1 2576829 R 526224 CDS YP_003634543.1 296127291 9143272 complement(2577294..2578577) 1 NC_014150.1 KEGG: lga:LGAS_1485 phage phi-C31 GP36 major capsid- like protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; phage major capsid protein, HK97 family 2578577 9143272 Bmur_2271 Brachyspira murdochii DSM 12563 phage major capsid protein, HK97 family YP_003634543.1 2577294 R 526224 CDS YP_003634544.1 296127292 9143273 complement(2578597..2579259) 1 NC_014150.1 KEGG: efa:EF2821 prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; phage prohead protease, HK97 family 2579259 9143273 Bmur_2272 Brachyspira murdochii DSM 12563 phage prohead protease, HK97 family YP_003634544.1 2578597 R 526224 CDS YP_003634545.1 296127293 9143274 complement(2579246..2580523) 1 NC_014150.1 KEGG: det:DET1087 HK97 family portal protein , TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family 2580523 9143274 Bmur_2273 Brachyspira murdochii DSM 12563 phage portal protein, HK97 family YP_003634545.1 2579246 R 526224 CDS YP_003634546.1 296127294 9143275 2580653..2581051 1 NC_014150.1 KEGG: pmr:PMI0923 phage terminase, small subunit; phage terminase small subunit 2581051 9143275 Bmur_2274 Brachyspira murdochii DSM 12563 phage terminase small subunit YP_003634546.1 2580653 D 526224 CDS YP_003634547.1 296127295 9143276 2581060..2582832 1 NC_014150.1 PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase; terminase 2582832 9143276 Bmur_2275 Brachyspira murdochii DSM 12563 terminase YP_003634547.1 2581060 D 526224 CDS YP_003634548.1 296127296 9143277 2583342..2583548 1 NC_014150.1 PFAM: Protein of unknown function DUF1778; KEGG: nmu:Nmul_B2796 mobilization protein; hypothetical protein 2583548 9143277 Bmur_2276 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634548.1 2583342 D 526224 CDS YP_003634549.1 296127297 9143278 2583612..2585630 1 NC_014150.1 KEGG: fps:FP1554 hypothetical protein; hypothetical protein 2585630 9143278 Bmur_2277 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634549.1 2583612 D 526224 CDS YP_003634550.1 296127298 9143279 2585677..2587536 1 NC_014150.1 KEGG: bcm:Bcenmc03_7078 hypothetical protein; hypothetical protein 2587536 9143279 Bmur_2278 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634550.1 2585677 D 526224 CDS YP_003634551.1 296127299 9143280 complement(2587609..2587737) 1 NC_014150.1 KEGG: hut:Huta_2286 hypothetical protein; hypothetical protein 2587737 9143280 Bmur_2279 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634551.1 2587609 R 526224 CDS YP_003634552.1 296127300 9143281 complement(2587737..2588684) 1 NC_014150.1 PFAM: integrase domain protein SAM domain protein; integrase; KEGG: tme:Tmel_0169 phage integrase; integrase domain-containing protein SAM domain-containing protein 2588684 9143281 Bmur_2280 Brachyspira murdochii DSM 12563 integrase domain-containing protein SAM domain-containing protein YP_003634552.1 2587737 R 526224 CDS YP_003634553.1 296127301 9143282 complement(2588763..2589170) 1 NC_014150.1 KEGG: bhy:BHWA1_01032 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 2589170 9143282 Bmur_2281 Brachyspira murdochii DSM 12563 single-strand binding protein YP_003634553.1 2588763 R 526224 CDS YP_003634554.1 296127302 9143283 complement(2589197..2589694) 1 NC_014150.1 KEGG: bpy:Bphyt_7293 hypothetical protein; hypothetical protein 2589694 9143283 Bmur_2282 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634554.1 2589197 R 526224 CDS YP_003634555.1 296127303 9143284 complement(2589717..2589887) 1 NC_014150.1 KEGG: bwe:BcerKBAB4_0827 group-specific protein; group-specific protein 2589887 9143284 Bmur_2283 Brachyspira murdochii DSM 12563 group-specific protein YP_003634555.1 2589717 R 526224 CDS YP_003634556.1 296127304 9143285 complement(2589884..2590114) 1 NC_014150.1 KEGG: conserved hypothetical protein; K12840 splicing factor 45; hypothetical protein 2590114 9143285 Bmur_2284 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634556.1 2589884 R 526224 CDS YP_003634557.1 296127305 9143286 complement(2590118..2590318) 1 NC_014150.1 KEGG: predicted protein; hypothetical protein 2590318 9143286 Bmur_2285 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634557.1 2590118 R 526224 CDS YP_003634558.1 296127306 9143287 complement(2590322..2590516) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2590516 9143287 Bmur_2286 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634558.1 2590322 R 526224 CDS YP_003634559.1 296127307 9143288 complement(2590547..2591266) 1 NC_014150.1 KEGG: rme:Rmet_6243 hypothetical protein; hypothetical protein 2591266 9143288 Bmur_2287 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634559.1 2590547 R 526224 CDS YP_003634560.1 296127308 9143289 complement(2591263..2591652) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2591652 9143289 Bmur_2288 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634560.1 2591263 R 526224 CDS YP_003634561.1 296127309 9143290 complement(2591642..2592496) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2592496 9143290 Bmur_2289 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634561.1 2591642 R 526224 CDS YP_003634562.1 296127310 9143291 complement(2592493..2592720) 1 NC_014150.1 KEGG: ate:Athe_1169 chromosome segregation protein SMC; hypothetical protein 2592720 9143291 Bmur_2290 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634562.1 2592493 R 526224 CDS YP_003634563.1 296127311 9143292 complement(2592733..2593002) 1 NC_014150.1 KEGG: cth:Cthe_1731 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 2593002 9143292 Bmur_2291 Brachyspira murdochii DSM 12563 HNH endonuclease YP_003634563.1 2592733 R 526224 CDS YP_003634564.1 296127312 9143293 complement(2593065..2593355) 1 NC_014150.1 KEGG: cac:CAC1607 hypothetical protein; hypothetical protein 2593355 9143293 Bmur_2292 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634564.1 2593065 R 526224 CDS YP_003634565.1 296127313 9143294 complement(2593541..2594392) 1 NC_014150.1 SMART: AAA ATPase; KEGG: pml:ATP_00193 chromosomal replication initiator protein; ATPase AAA 2594392 9143294 Bmur_2293 Brachyspira murdochii DSM 12563 ATPase AAA YP_003634565.1 2593541 R 526224 CDS YP_003634566.1 296127314 9143295 complement(2594358..2595248) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2595248 9143295 Bmur_2294 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634566.1 2594358 R 526224 CDS YP_003634567.1 296127315 9143296 2595784..2597784 1 NC_014150.1 PFAM: UvrD/REP helicase; KEGG: bhy:BHWA1_01161 ATP-dependent DNA helicase; UvrD/REP helicase 2597784 9143296 Bmur_2295 Brachyspira murdochii DSM 12563 UvrD/REP helicase YP_003634567.1 2595784 D 526224 CDS YP_003634568.1 296127316 9143297 2598341..2598481 1 NC_014150.1 hypothetical protein 2598481 9143297 Bmur_2296 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634568.1 2598341 D 526224 CDS YP_003634569.1 296127317 9143298 2599006..2600064 1 NC_014150.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; transport-associated OB domain protein; KEGG: bhy:BHWA1_02372 spermidine/putrescine transport ATP-binding protein PotA; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 2600064 9143298 Bmur_2297 Brachyspira murdochii DSM 12563 spermidine/putrescine ABC transporter ATPase YP_003634569.1 2599006 D 526224 CDS YP_003634570.1 296127318 9143299 2600061..2600870 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02373 spermidine/putrescine transport ATP-binding protein PotA; binding-protein-dependent transport system inner membrane protein 2600870 9143299 Bmur_2298 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003634570.1 2600061 D 526224 CDS YP_003634571.1 296127319 9143300 2600883..2601689 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02374 spermidine/putrescine transport ATP-binding protein PotA; binding-protein-dependent transport system inner membrane protein 2601689 9143300 Bmur_2299 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003634571.1 2600883 D 526224 CDS YP_003634572.1 296127320 9143301 2601743..2602945 1 NC_014150.1 PFAM: extracellular solute-binding protein family 1; KEGG: bhy:BHWA1_02375 spermidine/putrescine transport ATP-binding protein PotA; ABC transporter substrate-binding protein 2602945 9143301 Bmur_2300 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634572.1 2601743 D 526224 CDS YP_003634573.1 296127321 9143302 2603132..2603725 1 NC_014150.1 PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_02346 transcriptional regulator, TetR family protein; TetR family transcriptional regulator 2603725 9143302 Bmur_2301 Brachyspira murdochii DSM 12563 TetR family transcriptional regulator YP_003634573.1 2603132 D 526224 CDS YP_003634574.1 296127322 9143303 2603757..2605505 1 NC_014150.1 KEGG: bhy:BHWA1_02345 ABC-type transport system , ATPase and permease components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 2605505 9143303 Bmur_2302 Brachyspira murdochii DSM 12563 ABC transporter YP_003634574.1 2603757 D 526224 CDS YP_003634575.1 296127323 9143304 2605828..2607486 1 NC_014150.1 KEGG: bhy:BHWA1_02344 ABC-type multidrug transport system, ATPase and permease components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 2607486 9143304 Bmur_2303 Brachyspira murdochii DSM 12563 ABC transporter YP_003634575.1 2605828 D 526224 CDS YP_003634576.1 296127324 9143305 complement(2607572..2608951) 1 NC_014150.1 KEGG: bhy:BHWA1_02619 hydroxydechloroatrazine ethylaminohydrolase; PFAM: amidohydrolase; hydroxydechloroatrazine ethylaminohydrolase 2608951 9143305 Bmur_2304 Brachyspira murdochii DSM 12563 hydroxydechloroatrazine ethylaminohydrolase YP_003634576.1 2607572 R 526224 CDS YP_003634577.1 296127325 9143306 complement(2609225..2609833) 1 NC_014150.1 KEGG: bhy:BHWA1_02385 hypothetical protein; hypothetical protein 2609833 9143306 Bmur_2305 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634577.1 2609225 R 526224 CDS YP_003634578.1 296127326 9143307 complement(2609898..2610311) 1 NC_014150.1 PFAM: protein of unknown function DUF454; KEGG: bhy:BHWA1_02384 hypothetical protein; hypothetical protein 2610311 9143307 Bmur_2306 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634578.1 2609898 R 526224 CDS YP_003634579.1 296127327 9143308 complement(2610308..2610727) 1 NC_014150.1 KEGG: bhy:BHWA1_02383 hypothetical protein; hypothetical protein 2610727 9143308 Bmur_2307 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634579.1 2610308 R 526224 CDS YP_003634580.1 296127328 9143309 complement(2610828..2612147) 1 NC_014150.1 PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_02382 variable surface protein VspH; serpulina hyodysenteriae variable surface protein 2612147 9143309 Bmur_2308 Brachyspira murdochii DSM 12563 serpulina hyodysenteriae variable surface protein YP_003634580.1 2610828 R 526224 CDS YP_003634581.1 296127329 9143310 complement(2612255..2612935) 1 NC_014150.1 KEGG: bhy:BHWA1_02381 hypothetical protein; hypothetical protein 2612935 9143310 Bmur_2309 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634581.1 2612255 R 526224 CDS YP_003634582.1 296127330 9143311 complement(2613025..2613657) 1 NC_014150.1 KEGG: bhy:BHWA1_01714 hypothetical protein; hypothetical protein 2613657 9143311 Bmur_2310 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634582.1 2613025 R 526224 CDS YP_003634583.1 296127331 9143312 2613869..2615269 1 NC_014150.1 KEGG: bhy:BHWA1_02380 glycine/serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 2615269 9143312 Bmur_2311 Brachyspira murdochii DSM 12563 glycine hydroxymethyltransferase YP_003634583.1 2613869 D 526224 CDS YP_003634584.1 296127332 9143313 complement(2615353..2616012) 1 NC_014150.1 KEGG: bhy:BHWA1_02379 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 2616012 9143313 Bmur_2312 Brachyspira murdochii DSM 12563 HAD-superfamily hydrolase YP_003634584.1 2615353 R 526224 CDS YP_003634585.1 296127333 9143314 2616192..2616953 1 NC_014150.1 KEGG: bhy:BHWA1_02378 glucosamine-6-phosphate deaminase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase 2616953 9143314 Bmur_2313 Brachyspira murdochii DSM 12563 glucosamine-6-phosphate deaminase YP_003634585.1 2616192 D 526224 CDS YP_003634586.1 296127334 9143315 2617072..2618229 1 NC_014150.1 TIGRFAM: phosphopentomutase; KEGG: bhy:BHWA1_02377 phosphopentomutase; PFAM: phosphopentomutase domain protein; metalloenzyme domain protein; phosphopentomutase 2618229 9143315 Bmur_2314 Brachyspira murdochii DSM 12563 phosphopentomutase YP_003634586.1 2617072 D 526224 CDS YP_003634587.1 296127335 9143316 2619047..2620591 1 NC_014150.1 KEGG: bhy:BHWA1_02581 bifunctional GMP synthase/glutamine amidotransferase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; tRNA methyl transferase-like; glutamine amidotransferase class-I; GMP synthase 2620591 9143316 Bmur_2315 Brachyspira murdochii DSM 12563 GMP synthase YP_003634587.1 2619047 D 526224 CDS YP_003634588.1 296127336 9143317 2620722..2621540 1 NC_014150.1 KEGG: bhy:BHWA1_02539 hypothetical protein; hypothetical protein 2621540 9143317 Bmur_2316 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634588.1 2620722 D 526224 CDS YP_003634589.1 296127337 9143318 complement(2621817..2622380) 1 NC_014150.1 KEGG: bhy:BHWA1_01141 PAP2 family protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein 2622380 9143318 Bmur_2317 Brachyspira murdochii DSM 12563 phosphoesterase PA-phosphatase-like protein YP_003634589.1 2621817 R 526224 CDS YP_003634590.1 296127338 9143319 2622516..2623169 1 NC_014150.1 PFAM: ankyrin; KEGG: NACHT and ankyrin domain protein; ankyrin 2623169 9143319 Bmur_2318 Brachyspira murdochii DSM 12563 ankyrin YP_003634590.1 2622516 D 526224 CDS YP_003634591.1 296127339 9143320 complement(2623245..2624258) 1 NC_014150.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bhy:BHWA1_02525 FMN-dependent alpha- hydroxyacid oxidizing enzyme; FMN-dependent alpha-hydroxy acid dehydrogenase 2624258 9143320 Bmur_2319 Brachyspira murdochii DSM 12563 FMN-dependent alpha-hydroxy acid dehydrogenase YP_003634591.1 2623245 R 526224 CDS YP_003634592.1 296127340 9143321 2624435..2626288 1 NC_014150.1 KEGG: bhy:BHWA1_02527 hypothetical protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 2626288 9143321 Bmur_2320 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634592.1 2624435 D 526224 CDS YP_003634593.1 296127341 9143322 2626326..2628578 1 NC_014150.1 KEGG: bhy:BHWA1_02528 TPR domain- containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein; hypothetical protein 2628578 9143322 Bmur_2321 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634593.1 2626326 D 526224 CDS YP_003634594.1 296127342 9143323 2628740..2629798 1 NC_014150.1 KEGG: bhy:BHWA1_02529 TPR domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 2629798 9143323 Bmur_2322 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634594.1 2628740 D 526224 CDS YP_003634595.1 296127343 9143325 complement(2630876..2631034) 1 NC_014150.1 KEGG: bhy:BHWA1_02549 hypothetical protein; hypothetical protein 2631034 9143325 Bmur_2324 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634595.1 2630876 R 526224 CDS YP_003634596.1 296127344 9143326 complement(2631046..2632068) 1 NC_014150.1 PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_02550 beta-methylgalactoside transporter inner membrane component; inner-membrane translocator 2632068 9143326 Bmur_2325 Brachyspira murdochii DSM 12563 inner-membrane translocator YP_003634596.1 2631046 R 526224 CDS YP_003634597.1 296127345 9143327 complement(2632087..2633592) 1 NC_014150.1 KEGG: bhy:BHWA1_02551 galactose/methyl galaxtoside transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2633592 9143327 Bmur_2326 Brachyspira murdochii DSM 12563 ABC transporter YP_003634597.1 2632087 R 526224 CDS YP_003634598.1 296127346 9143328 complement(2633687..2634739) 1 NC_014150.1 KEGG: bhy:BHWA1_02552 galactose/glucose-binding protein; galactose/glucose-binding protein 2634739 9143328 Bmur_2327 Brachyspira murdochii DSM 12563 galactose/glucose-binding protein YP_003634598.1 2633687 R 526224 CDS YP_003634599.1 296127347 9143329 complement(2635181..2636215) 1 NC_014150.1 KEGG: bhy:BHWA1_02552 galactose/glucose-binding protein; galactose/glucose-binding protein 2636215 9143329 Bmur_2328 Brachyspira murdochii DSM 12563 galactose/glucose-binding protein YP_003634599.1 2635181 R 526224 CDS YP_003634600.1 296127348 9143330 complement(2636287..2637315) 1 NC_014150.1 KEGG: bhy:BHWA1_02553 galactose/glucose-binding protein; galactose/glucose-binding protein 2637315 9143330 Bmur_2329 Brachyspira murdochii DSM 12563 galactose/glucose-binding protein YP_003634600.1 2636287 R 526224 CDS YP_003634601.1 296127349 9143331 complement(2637464..2638477) 1 NC_014150.1 KEGG: bhy:BHWA1_02554 galactose/glucose-binding protein; galactose/glucose-binding protein 2638477 9143331 Bmur_2330 Brachyspira murdochii DSM 12563 galactose/glucose-binding protein YP_003634601.1 2637464 R 526224 CDS YP_003634602.1 296127350 9143332 complement(2638563..2640491) 1 NC_014150.1 KEGG: dol:Dole_1466 hypothetical protein; hypothetical protein 2640491 9143332 Bmur_2331 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634602.1 2638563 R 526224 CDS YP_003634603.1 296127351 9143333 complement(2640599..2640889) 1 NC_014150.1 KEGG: bhy:BHWA1_01650 hypothetical protein; hypothetical protein 2640889 9143333 Bmur_2332 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634603.1 2640599 R 526224 CDS YP_003634604.1 296127352 9143334 2641030..2642091 1 NC_014150.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: bhy:BHWA1_02555 3-dehydroquinate synthetase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 2642091 9143334 Bmur_2333 Brachyspira murdochii DSM 12563 3-dehydroquinate synthase YP_003634604.1 2641030 D 526224 CDS YP_003634605.1 296127353 9143335 2642278..2642949 1 NC_014150.1 KEGG: bhy:BHWA1_00734 ankyrin repeat- containing protein; hypothetical protein 2642949 9143335 Bmur_2334 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634605.1 2642278 D 526224 CDS YP_003634606.1 296127354 9143336 complement(2643019..2643450) 1 NC_014150.1 KEGG: bhy:BHWA1_02556 flavodoxin; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin 2643450 9143336 Bmur_2335 Brachyspira murdochii DSM 12563 flavodoxin YP_003634606.1 2643019 R 526224 CDS YP_003634607.1 296127355 9143337 complement(2643490..2644056) 1 NC_014150.1 KEGG: bhy:BHWA1_02557 hypothetical protein; hypothetical protein 2644056 9143337 Bmur_2336 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634607.1 2643490 R 526224 CDS YP_003634608.1 296127356 9143338 complement(2644181..2645104) 1 NC_014150.1 PFAM: auxin efflux carrier; KEGG: hor:Hore_22310 auxin efflux carrier; auxin efflux carrier 2645104 9143338 Bmur_2337 Brachyspira murdochii DSM 12563 auxin efflux carrier YP_003634608.1 2644181 R 526224 CDS YP_003634609.1 296127357 9143339 2645331..2647247 1 NC_014150.1 KEGG: bhy:BHWA1_02558 heat shock protein HSP90; PFAM: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like; SMART: ATP-binding region ATPase domain protein; ATP-binding region ATPase domain-containing protein 2647247 9143339 Bmur_2338 Brachyspira murdochii DSM 12563 ATP-binding region ATPase domain-containing protein YP_003634609.1 2645331 D 526224 CDS YP_003634610.1 296127358 9143340 complement(2647554..2648231) 1 NC_014150.1 KEGG: bhy:BHWA1_00619 hypothetical protein; hypothetical protein 2648231 9143340 Bmur_2339 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634610.1 2647554 R 526224 CDS YP_003634611.1 296127359 9143341 complement(2648255..2648680) 1 NC_014150.1 KEGG: bhy:BHWA1_02559 hypothetical protein; hypothetical protein 2648680 9143341 Bmur_2340 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634611.1 2648255 R 526224 CDS YP_003634612.1 296127360 9143342 complement(2648839..2649072) 1 NC_014150.1 KEGG: bre:BRE_355 hypothetical protein; hypothetical protein 2649072 9143342 Bmur_2341 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634612.1 2648839 R 526224 CDS YP_003634613.1 296127361 9143343 2649641..2650663 1 NC_014150.1 KEGG: bhy:BHWA1_02561 hypothetical protein; hypothetical protein 2650663 9143343 Bmur_2342 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634613.1 2649641 D 526224 CDS YP_003634614.1 296127362 9143344 2650770..2651699 1 NC_014150.1 KEGG: bhy:BHWA1_02562 R polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; RpoD subfamily RNA polymerase sigma-70 subunit 2651699 9143344 Bmur_2343 Brachyspira murdochii DSM 12563 RpoD subfamily RNA polymerase sigma-70 subunit YP_003634614.1 2650770 D 526224 CDS YP_003634615.1 296127363 9143345 2651799..2652671 1 NC_014150.1 KEGG: bhy:BHWA1_02563 hypothetical protein; hypothetical protein 2652671 9143345 Bmur_2344 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634615.1 2651799 D 526224 CDS YP_003634616.1 296127364 9143346 2653016..2653855 1 NC_014150.1 TIGRFAM: diaminopimelate epimerase; KEGG: bhy:BHWA1_00918 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 2653855 9143346 Bmur_2345 Brachyspira murdochii DSM 12563 diaminopimelate epimerase YP_003634616.1 2653016 D 526224 CDS YP_003634617.1 296127365 9143347 2653999..2654559 1 NC_014150.1 PFAM: lytic transglycosylase catalytic; KEGG: bhy:BHWA1_00917 LT GEWL, lytic transglycosylase (LT); lytic transglycosylase 2654559 9143347 Bmur_2346 Brachyspira murdochii DSM 12563 lytic transglycosylase YP_003634617.1 2653999 D 526224 CDS YP_003634618.1 296127366 9143348 complement(2654607..2655401) 1 NC_014150.1 KEGG: bhy:BHWA1_00916 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgG 2655401 9143348 Bmur_2347 Brachyspira murdochii DSM 12563 flagellar basal-body rod protein FlgG YP_003634618.1 2654607 R 526224 CDS YP_003634619.1 296127367 9143349 2655584..2656969 1 NC_014150.1 KEGG: gyc:GYMC61_3383 hypothetical protein; hypothetical protein 2656969 9143349 Bmur_2348 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634619.1 2655584 D 526224 CDS YP_003634620.1 296127368 9143350 2656969..2657574 1 NC_014150.1 KEGG: pml:ATP_00169 hypothetical protein; hypothetical protein 2657574 9143350 Bmur_2349 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634620.1 2656969 D 526224 CDS YP_003634621.1 296127369 9143351 2657704..2658354 1 NC_014150.1 KEGG: bhy:BHWA1_01181 HisM, ABC-type amino acid transport system, permease component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2658354 9143351 Bmur_2350 Brachyspira murdochii DSM 12563 polar amino acid ABC transporter inner membrane subunit YP_003634621.1 2657704 D 526224 CDS YP_003634622.1 296127370 9143352 2658338..2659120 1 NC_014150.1 KEGG: bhy:BHWA1_01180 GlnQ, ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2659120 9143352 Bmur_2351 Brachyspira murdochii DSM 12563 ABC transporter YP_003634622.1 2658338 D 526224 CDS YP_003634623.1 296127371 9143353 2659387..2660214 1 NC_014150.1 KEGG: bhy:BHWA1_01179 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 2660214 9143353 Bmur_2352 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634623.1 2659387 D 526224 CDS YP_003634624.1 296127372 9143354 2660258..2661118 1 NC_014150.1 KEGG: bhy:BHWA1_01178 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ABC transporter substrate-binding protein 2661118 9143354 Bmur_2353 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003634624.1 2660258 D 526224 CDS YP_003634625.1 296127373 9143355 complement(2661183..2662043) 1 NC_014150.1 PFAM: leucine-rich repeat protein; KEGG: bhy:BHWA1_01177 leucine-rich repeat containing protein; leucine-rich repeat protein 2662043 9143355 Bmur_2354 Brachyspira murdochii DSM 12563 leucine-rich repeat protein YP_003634625.1 2661183 R 526224 CDS YP_003634626.1 296127374 9143356 complement(2662132..2662872) 1 NC_014150.1 TIGRFAM: 3-dehydroquinate dehydratase, type I; KEGG: bhy:BHWA1_01176 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I; 3-dehydroquinate dehydratase 2662872 9143356 Bmur_2355 Brachyspira murdochii DSM 12563 3-dehydroquinate dehydratase YP_003634626.1 2662132 R 526224 CDS YP_003634627.1 296127375 9143357 complement(2662907..2663758) 1 NC_014150.1 KEGG: bhy:BHWA1_01175 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; shikimate 5-dehydrogenase 2663758 9143357 Bmur_2356 Brachyspira murdochii DSM 12563 shikimate 5-dehydrogenase YP_003634627.1 2662907 R 526224 CDS YP_003634628.1 296127376 9143358 2663950..2664333 1 NC_014150.1 KEGG: bhy:BHWA1_01174 endoribonuclease; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 2664333 9143358 Bmur_2357 Brachyspira murdochii DSM 12563 endoribonuclease L-PSP YP_003634628.1 2663950 D 526224 CDS YP_003634629.1 296127377 9143359 2664786..2665646 1 NC_014150.1 PFAM: protein of unknown function DUF368; KEGG: bhy:BHWA1_01173 hypothetical protein; hypothetical protein 2665646 9143359 Bmur_2358 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634629.1 2664786 D 526224 CDS YP_003634630.1 296127378 9143360 2665847..2666851 1 NC_014150.1 KEGG: bhy:BHWA1_01172 hypothetical protein; hypothetical protein 2666851 9143360 Bmur_2359 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634630.1 2665847 D 526224 CDS YP_003634631.1 296127379 9143361 2666869..2667909 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_01171 TPR domain-containing protein; hypothetical protein 2667909 9143361 Bmur_2360 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634631.1 2666869 D 526224 CDS YP_003634632.1 296127380 9143362 complement(2668000..2668752) 1 NC_014150.1 KEGG: bhy:BHWA1_02458 UDP-N-acetyl-D-mannosamine transferase; UDP-N-acetyl-D-mannosamine transferase 2668752 9143362 Bmur_2361 Brachyspira murdochii DSM 12563 UDP-N-acetyl-D-mannosamine transferase YP_003634632.1 2668000 R 526224 CDS YP_003634633.1 296127381 9143363 complement(2668786..2669766) 1 NC_014150.1 TIGRFAM: 6-phosphofructokinase; KEGG: bhy:BHWA1_02459 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 2669766 9143363 Bmur_2362 Brachyspira murdochii DSM 12563 6-phosphofructokinase YP_003634633.1 2668786 R 526224 CDS YP_003634634.1 296127382 9143364 2669894..2671258 1 NC_014150.1 KEGG: bhy:BHWA1_02460 Mg/Co/Ni transporter MgtE; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; magnesium transporter 2671258 9143364 Bmur_2363 Brachyspira murdochii DSM 12563 magnesium transporter YP_003634634.1 2669894 D 526224 CDS YP_003634635.1 296127383 9143365 complement(2671410..2672540) 1 NC_014150.1 PFAM: protein of unknown function DUF362; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_02617 hypothetical protein; hypothetical protein 2672540 9143365 Bmur_2364 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634635.1 2671410 R 526224 CDS YP_003634636.1 296127384 9143366 complement(2672744..2673853) 1 NC_014150.1 KEGG: bhy:BHWA1_01367 hypothetical protein; hypothetical protein 2673853 9143366 Bmur_2365 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634636.1 2672744 R 526224 CDS YP_003634637.1 296127385 9143367 complement(2673892..2675142) 1 NC_014150.1 PFAM: Cl- channel voltage-gated family protein; KEGG: bhy:BHWA1_01088 chloride channel protein; Cl- channel voltage-gated family protein 2675142 9143367 Bmur_2366 Brachyspira murdochii DSM 12563 Cl- channel voltage-gated family protein YP_003634637.1 2673892 R 526224 CDS YP_003634638.1 296127386 9143368 complement(2675187..2676287) 1 NC_014150.1 KEGG: bhy:BHWA1_01089 translation-associated GTPase; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related; GTP-binding protein YchF 2676287 9143368 Bmur_2367 Brachyspira murdochii DSM 12563 GTP-binding protein YchF YP_003634638.1 2675187 R 526224 CDS YP_003634639.1 296127387 9143369 2676610..2677515 1 NC_014150.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: bhy:BHWA1_00923 UDP-N-acetylmuramate dehydrogenase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 2677515 9143369 Bmur_2368 Brachyspira murdochii DSM 12563 UDP-N-acetylenolpyruvoylglucosamine reductase YP_003634639.1 2676610 D 526224 CDS YP_003634640.1 296127388 9143370 complement(2677518..2678225) 1 NC_014150.1 PFAM: acyl-ACP thioesterase; KEGG: bhy:BHWA1_01038 acyl-ACP thioesterase; acyl-ACP thioesterase 2678225 9143370 Bmur_2369 Brachyspira murdochii DSM 12563 acyl-ACP thioesterase YP_003634640.1 2677518 R 526224 CDS YP_003634641.1 296127389 9143371 complement(2678304..2679581) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00784 TPR domain-containing protein; hypothetical protein 2679581 9143371 Bmur_2370 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634641.1 2678304 R 526224 CDS YP_003634642.1 296127390 9143372 2679765..2681027 1 NC_014150.1 KEGG: bhy:BHWA1_02620 hypothetical protein; hypothetical protein 2681027 9143372 Bmur_2371 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634642.1 2679765 D 526224 CDS YP_003634643.1 296127391 9143373 complement(2681148..2683124) 1 NC_014150.1 KEGG: bhy:BHWA1_00855 hypothetical protein; hypothetical protein 2683124 9143373 Bmur_2372 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634643.1 2681148 R 526224 CDS YP_003634644.1 296127392 9143374 complement(2683251..2684918) 1 NC_014150.1 KEGG: bhy:BHWA1_00854 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2684918 9143374 Bmur_2373 Brachyspira murdochii DSM 12563 ankyrin YP_003634644.1 2683251 R 526224 CDS YP_003634645.1 296127393 9143375 complement(2685105..2685248) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00591 ankyrin repeat-containing protein; ankyrin 2685248 9143375 Bmur_2374 Brachyspira murdochii DSM 12563 ankyrin YP_003634645.1 2685105 R 526224 CDS YP_003634646.1 296127394 9143376 complement(2685953..2687401) 1 NC_014150.1 KEGG: bhy:BHWA1_01029 glutamyl-tRNA(Gln) amidotransferase, A subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 2687401 9143376 Bmur_2375 Brachyspira murdochii DSM 12563 glutamyl-tRNA(Gln) amidotransferase subunit A YP_003634646.1 2685953 R 526224 CDS YP_003634647.1 296127395 9143377 complement(2687579..2688481) 1 NC_014150.1 KEGG: bhy:BHWA1_01030 hypothetical protein; hypothetical protein 2688481 9143377 Bmur_2376 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634647.1 2687579 R 526224 CDS YP_003634648.1 296127396 9143378 2688752..2689099 1 NC_014150.1 KEGG: bhy:BHWA1_01031 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 2689099 9143378 Bmur_2377 Brachyspira murdochii DSM 12563 30S ribosomal protein S6 YP_003634648.1 2688752 D 526224 CDS YP_003634649.1 296127397 9143379 2689116..2689541 1 NC_014150.1 KEGG: bhy:BHWA1_01032 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 2689541 9143379 Bmur_2378 Brachyspira murdochii DSM 12563 single-strand binding protein YP_003634649.1 2689116 D 526224 CDS YP_003634650.1 296127398 9143380 2689573..2689911 1 NC_014150.1 KEGG: bhy:BHWA1_01033 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 2689911 9143380 Bmur_2379 Brachyspira murdochii DSM 12563 30S ribosomal protein S18 YP_003634650.1 2689573 D 526224 CDS YP_003634651.1 296127399 9143381 2690132..2691082 1 NC_014150.1 PFAM: aldo/keto reductase; KEGG: bfs:BF2134 aldo/keto reductase; aldo/keto reductase 2691082 9143381 Bmur_2380 Brachyspira murdochii DSM 12563 aldo/keto reductase YP_003634651.1 2690132 D 526224 CDS YP_003634652.1 296127400 9143382 2691189..2691776 1 NC_014150.1 PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3505 multimeric flavodoxin WrbA family protein; NADPH-dependent FMN reductase 2691776 9143382 Bmur_2381 Brachyspira murdochii DSM 12563 NADPH-dependent FMN reductase YP_003634652.1 2691189 D 526224 CDS YP_003634653.1 296127401 9143383 2691971..2693716 1 NC_014150.1 KEGG: bhy:BHWA1_01034 thiol-disulfide interchange protein; PFAM: cytochrome c biogenesis protein transmembrane region; Protein-disulfide reductase 2693716 9143383 Bmur_2382 Brachyspira murdochii DSM 12563 Protein-disulfide reductase YP_003634653.1 2691971 D 526224 CDS YP_003634654.1 296127402 9143384 2693836..2695416 1 NC_014150.1 KEGG: bhy:BHWA1_01036 ankyrin repeat-containing protein; ankyrin repeat-containing protein 2695416 9143384 Bmur_2383 Brachyspira murdochii DSM 12563 ankyrin repeat-containing protein YP_003634654.1 2693836 D 526224 CDS YP_003634655.1 296127403 9143385 complement(2695473..2696417) 1 NC_014150.1 KEGG: bhy:BHWA1_00754 hypothetical protein; hypothetical protein 2696417 9143385 Bmur_2384 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634655.1 2695473 R 526224 CDS YP_003634656.1 296127404 9143386 complement(2696568..2697017) 1 NC_014150.1 TIGRFAM: ribose 5-phosphate isomerase B; sugar- phosphate isomerase, RpiB/LacA/LacB family; KEGG: bhy:BHWA1_01037 ribose-5-phosphate isomerase B; PFAM: ribose/galactose isomerase; ribose 5-phosphate isomerase B 2697017 9143386 Bmur_2385 Brachyspira murdochii DSM 12563 ribose 5-phosphate isomerase B YP_003634656.1 2696568 R 526224 CDS YP_003634657.1 296127405 9143388 complement(2698223..2698582) 1 NC_014150.1 KEGG: bhy:BHWA1_01116 hypothetical protein; hypothetical protein 2698582 9143388 Bmur_2387 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634657.1 2698223 R 526224 CDS YP_003634658.1 296127406 9143389 complement(2698865..2699209) 1 NC_014150.1 KEGG: bhy:BHWA1_01116 hypothetical protein; hypothetical protein 2699209 9143389 Bmur_2388 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634658.1 2698865 R 526224 CDS YP_003634659.1 296127407 9143390 complement(2699223..2700203) 1 NC_014150.1 KEGG: bhy:BHWA1_01115 hypothetical protein; hypothetical protein 2700203 9143390 Bmur_2389 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634659.1 2699223 R 526224 CDS YP_003634660.1 296127408 9143391 2700479..2701708 1 NC_014150.1 KEGG: bhy:BHWA1_01113 hypothetical protein; hypothetical protein 2701708 9143391 Bmur_2390 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634660.1 2700479 D 526224 CDS YP_003634661.1 296127409 9143392 2701692..2702138 1 NC_014150.1 KEGG: bhy:BHWA1_01112 iojap superfamily ortholog; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 2702138 9143392 Bmur_2391 Brachyspira murdochii DSM 12563 iojap family protein YP_003634661.1 2701692 D 526224 CDS YP_003634662.1 296127410 9143393 2702160..2702900 1 NC_014150.1 KEGG: bhy:BHWA1_01111 hypothetical protein; hypothetical protein 2702900 9143393 Bmur_2392 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634662.1 2702160 D 526224 CDS YP_003634663.1 296127411 9143394 complement(2702966..2703988) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2703988 9143394 Bmur_2393 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634663.1 2702966 R 526224 CDS YP_003634664.1 296127412 9143395 complement(2704181..2704861) 1 NC_014150.1 KEGG: dma:DMR_30000 hypothetical protein; hypothetical protein 2704861 9143395 Bmur_2394 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634664.1 2704181 R 526224 CDS YP_003634665.1 296127413 9143396 complement(2705004..2705387) 1 NC_014150.1 KEGG: ssp:SSP0585 sodium-dependent transporter; hypothetical protein 2705387 9143396 Bmur_2395 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634665.1 2705004 R 526224 CDS YP_003634666.1 296127414 9143397 complement(2705416..2705907) 1 NC_014150.1 KEGG: aac:Aaci_1410 flagellar biosynthesis protein FlhA; hypothetical protein 2705907 9143397 Bmur_2396 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634666.1 2705416 R 526224 CDS YP_003634667.1 296127415 9143398 complement(2705978..2706319) 1 NC_014150.1 PFAM: TM2 domain containing protein; KEGG: lic:LIC12836 hypothetical protein; TM2 domain-containing protein 2706319 9143398 Bmur_2397 Brachyspira murdochii DSM 12563 TM2 domain-containing protein YP_003634667.1 2705978 R 526224 CDS YP_003634668.1 296127416 9143402 2707131..2708417 1 NC_014150.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: bhy:BHWA1_01107 recombinase A; SMART: AAA ATPase; recombinase A 2708417 9143402 Bmur_2398 Brachyspira murdochii DSM 12563 recombinase A YP_003634668.1 2707131 D 526224 CDS YP_003634669.1 296127417 9143403 2708584..2709438 1 NC_014150.1 KEGG: bhy:BHWA1_01106 hypothetical protein; hypothetical protein 2709438 9143403 Bmur_2399 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634669.1 2708584 D 526224 CDS YP_003634670.1 296127418 9143404 complement(2709394..2709948) 1 NC_014150.1 PFAM: SCP-like extracellular; KEGG: cpy:Cphy_1940 SCP-like extracellular; hypothetical protein 2709948 9143404 Bmur_2400 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634670.1 2709394 R 526224 CDS YP_003634671.1 296127419 9143405 2710191..2710964 1 NC_014150.1 PFAM: dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bhy:BHWA1_02607 dihydroorotate dehydrogenase electron transfer subunit; dihydroorotate dehydrogenase electron transfer subunit 2710964 9143405 Bmur_2401 Brachyspira murdochii DSM 12563 dihydroorotate dehydrogenase electron transfer subunit YP_003634671.1 2710191 D 526224 CDS YP_003634672.1 296127420 9143406 2710980..2711891 1 NC_014150.1 KEGG: bhy:BHWA1_02606 dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain protein; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase 2711891 9143406 Bmur_2402 Brachyspira murdochii DSM 12563 dihydroorotate dehydrogenase YP_003634672.1 2710980 D 526224 CDS YP_003634673.1 296127421 9143407 2711953..2713308 1 NC_014150.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; orotate phosphoribosyltransferase; KEGG: bhy:BHWA1_02605 orotidine 5'- phosphate decarboxylase/orotate phosphoribosyltransferase; PFAM: Orotidine 5'-phosphate decarboxylase; phosphoribosyltransferase; orotidine 5'-phosphate decarboxylase 2713308 9143407 Bmur_2403 Brachyspira murdochii DSM 12563 orotidine 5'-phosphate decarboxylase YP_003634673.1 2711953 D 526224 CDS YP_003634674.1 296127422 9143408 complement(2713378..2713983) 1 NC_014150.1 KEGG: bhy:BHWA1_02604 rhodanese homology domain (RHOD) protein; PFAM: protein of unknown function DUF156; Rhodanese domain protein; SMART: Rhodanese domain protein; hypothetical protein 2713983 9143408 Bmur_2404 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634674.1 2713378 R 526224 CDS YP_003634675.1 296127423 9143409 complement(2714141..2715829) 1 NC_014150.1 KEGG: bhy:BHWA1_02603 pyridine nucleotide- disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2715829 9143409 Bmur_2405 Brachyspira murdochii DSM 12563 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003634675.1 2714141 R 526224 CDS YP_003634676.1 296127424 9143410 2716112..2716309 1 NC_014150.1 KEGG: bhy:BHWA1_02602 hypothetical protein; hypothetical protein 2716309 9143410 Bmur_2406 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634676.1 2716112 D 526224 CDS YP_003634677.1 296127425 9143411 2716509..2716697 1 NC_014150.1 KEGG: bhy:BHWA1_02601 hypothetical protein; hypothetical protein 2716697 9143411 Bmur_2407 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634677.1 2716509 D 526224 CDS YP_003634678.1 296127426 9143412 2716894..2717283 1 NC_014150.1 KEGG: bhy:BHWA1_02599 transcriptional regulator, MerR family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 2717283 9143412 Bmur_2408 Brachyspira murdochii DSM 12563 XRE family transcriptional regulator YP_003634678.1 2716894 D 526224 CDS YP_003634679.1 296127427 9143413 2717550..2717756 1 NC_014150.1 KEGG: bhy:BHWA1_00595 ankyrin repeat-containing protein; ankyrin repeat-containing protein 2717756 9143413 Bmur_2409 Brachyspira murdochii DSM 12563 ankyrin repeat-containing protein YP_003634679.1 2717550 D 526224 CDS YP_003634680.1 296127428 9143414 2717763..2718017 1 NC_014150.1 KEGG: bhy:BHWA1_00596 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2718017 9143414 Bmur_2410 Brachyspira murdochii DSM 12563 ankyrin YP_003634680.1 2717763 D 526224 CDS YP_003634681.1 296127429 9143415 2718036..2718620 1 NC_014150.1 KEGG: bhy:BHWA1_00591 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2718620 9143415 Bmur_2411 Brachyspira murdochii DSM 12563 ankyrin YP_003634681.1 2718036 D 526224 CDS YP_003634682.1 296127430 9143417 2720468..2721448 1 NC_014150.1 KEGG: bhy:BHWA1_00994 hypothetical protein; hypothetical protein 2721448 9143417 Bmur_2413 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634682.1 2720468 D 526224 CDS YP_003634683.1 296127431 9143418 2721579..2723510 1 NC_014150.1 KEGG: bhy:BHWA1_00856 hypothetical protein; hypothetical protein 2723510 9143418 Bmur_2414 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634683.1 2721579 D 526224 CDS YP_003634684.1 296127432 9143419 complement(2723944..2724924) 1 NC_014150.1 PFAM: glycosyl transferase 9; KEGG: bhy:BHWA1_02595 ADP-heptose:LPS heptosyltransferase II; glycosyl transferase 2724924 9143419 Bmur_2415 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003634684.1 2723944 R 526224 CDS YP_003634685.1 296127433 9143420 complement(2724921..2726057) 1 NC_014150.1 PFAM: protein of unknown function UPF0118; KEGG: bhy:BHWA1_02594 predicted hypothetical protein of unknown function; hypothetical protein 2726057 9143420 Bmur_2416 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634685.1 2724921 R 526224 CDS YP_003634686.1 296127434 9143421 2726164..2729538 1 NC_014150.1 KEGG: bhy:BHWA1_02593 UvrD/REP helicase; PFAM: UvrD/REP helicase; exodeoxyribonuclease V 2729538 9143421 Bmur_2417 Brachyspira murdochii DSM 12563 exodeoxyribonuclease V YP_003634686.1 2726164 D 526224 CDS YP_003634687.1 296127435 9143422 2729773..2730489 1 NC_014150.1 KEGG: bhy:BHWA1_02592 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; SMART: Tetratricopeptide repeat; hypothetical protein 2730489 9143422 Bmur_2418 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634687.1 2729773 D 526224 CDS YP_003634688.1 296127436 9143423 2730486..2731766 1 NC_014150.1 KEGG: bhy:BHWA1_02591 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 2731766 9143423 Bmur_2419 Brachyspira murdochii DSM 12563 DNA protecting protein DprA YP_003634688.1 2730486 D 526224 CDS YP_003634689.1 296127437 9143424 2731805..2733952 1 NC_014150.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: bhy:BHWA1_02590 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I 2733952 9143424 Bmur_2420 Brachyspira murdochii DSM 12563 DNA topoisomerase I YP_003634689.1 2731805 D 526224 CDS YP_003634690.1 296127438 9143425 2733913..2734842 1 NC_014150.1 PFAM: cell wall hydrolase/autolysin; KEGG: bhy:BHWA1_02589 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 2734842 9143425 Bmur_2421 Brachyspira murdochii DSM 12563 N-acetylmuramoyl-L-alanine amidase YP_003634690.1 2733913 D 526224 CDS YP_003634691.1 296127439 9143426 2734897..2736225 1 NC_014150.1 KEGG: gwc:GWCH70_3230 hypothetical protein; hypothetical protein 2736225 9143426 Bmur_2422 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634691.1 2734897 D 526224 CDS YP_003634692.1 296127440 9143427 2736229..2736828 1 NC_014150.1 KEGG: gwc:GWCH70_3229 hypothetical protein; hypothetical protein 2736828 9143427 Bmur_2423 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634692.1 2736229 D 526224 CDS YP_003634693.1 296127441 9143428 complement(2736844..2737926) 1 NC_014150.1 KEGG: rbo:A1I_03215 capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein- like protein 2737926 9143428 Bmur_2424 Brachyspira murdochii DSM 12563 capsular polysaccharide biosynthesis protein- like protein YP_003634693.1 2736844 R 526224 CDS YP_003634694.1 296127442 9143429 2738385..2739770 1 NC_014150.1 KEGG: bhy:BHWA1_02479 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 2739770 9143429 Bmur_2425 Brachyspira murdochii DSM 12563 MATE efflux family protein YP_003634694.1 2738385 D 526224 CDS YP_003634695.1 296127443 9143430 2739979..2741913 1 NC_014150.1 KEGG: bhy:BHWA1_02478 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2741913 9143430 Bmur_2426 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634695.1 2739979 D 526224 CDS YP_003634696.1 296127444 9143431 2741926..2743878 1 NC_014150.1 KEGG: bhy:BHWA1_02477 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2743878 9143431 Bmur_2427 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634696.1 2741926 D 526224 CDS YP_003634697.1 296127445 9143432 2743878..2744348 1 NC_014150.1 PFAM: Colicin V production protein; KEGG: bhy:BHWA1_02476 hypothetical protein; colicin V production protein 2744348 9143432 Bmur_2428 Brachyspira murdochii DSM 12563 colicin V production protein YP_003634697.1 2743878 D 526224 CDS YP_003634698.1 296127446 9143433 complement(2744397..2744618) 1 NC_014150.1 KEGG: bhy:BHWA1_02473 hypothetical protein; hypothetical protein 2744618 9143433 Bmur_2429 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634698.1 2744397 R 526224 CDS YP_003634699.1 296127447 9143434 complement(2744612..2745730) 1 NC_014150.1 KEGG: bhy:BHWA1_02474 aminotransferase class-V; PFAM: aminotransferase class V; cysteine desulfurase 2745730 9143434 Bmur_2430 Brachyspira murdochii DSM 12563 cysteine desulfurase YP_003634699.1 2744612 R 526224 CDS YP_003634700.1 296127448 9143435 complement(2745745..2746314) 1 NC_014150.1 KEGG: bhy:BHWA1_02475 protein of unknown function with an N-terminal SirA-like domain; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA family protein; selenium metabolism protein YedF 2746314 9143435 Bmur_2431 Brachyspira murdochii DSM 12563 selenium metabolism protein YedF YP_003634700.1 2745745 R 526224 CDS YP_003634701.1 296127449 9143436 complement(2746404..2747210) 1 NC_014150.1 PFAM: ABC transporter; KEGG: bhy:BHWA1_00888 ABC-3, ABC 3 transport family protein; ABC transporter 2747210 9143436 Bmur_2432 Brachyspira murdochii DSM 12563 ABC transporter YP_003634701.1 2746404 R 526224 CDS YP_003634702.1 296127450 9143437 complement(2747329..2748414) 1 NC_014150.1 PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_00889 variable surface protein A; serpulina hyodysenteriae variable surface protein 2748414 9143437 Bmur_2433 Brachyspira murdochii DSM 12563 serpulina hyodysenteriae variable surface protein YP_003634702.1 2747329 R 526224 CDS YP_003634703.1 296127451 9143438 complement(2748531..2749271) 1 NC_014150.1 KEGG: bhy:BHWA1_00890 ZnuC, ABC-type Mn/Zn transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2749271 9143438 Bmur_2434 Brachyspira murdochii DSM 12563 ABC transporter YP_003634703.1 2748531 R 526224 CDS YP_003634704.1 296127452 9143439 complement(2749303..2750208) 1 NC_014150.1 PFAM: periplasmic solute binding protein; KEGG: bhy:BHWA1_00891 periplasmic solute binding protein; periplasmic solute binding protein 2750208 9143439 Bmur_2435 Brachyspira murdochii DSM 12563 periplasmic solute binding protein YP_003634704.1 2749303 R 526224 CDS YP_003634705.1 296127453 9143440 2750390..2750797 1 NC_014150.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_00892 heat shock protein; hypothetical protein 2750797 9143440 Bmur_2436 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634705.1 2750390 D 526224 CDS YP_003634706.1 296127454 9143441 2750814..2751224 1 NC_014150.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bhy:BHWA1_00893 hypothetical protein; hypothetical protein 2751224 9143441 Bmur_2437 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634706.1 2750814 D 526224 CDS YP_003634707.1 296127455 9143442 2751232..2751960 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00894 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 2751960 9143442 Bmur_2438 Brachyspira murdochii DSM 12563 binding-protein-dependent transport system inner membrane protein YP_003634707.1 2751232 D 526224 CDS YP_003634708.1 296127456 9143443 2751950..2752636 1 NC_014150.1 KEGG: bhy:BHWA1_00895 nitrate ABC transporter, ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2752636 9143443 Bmur_2439 Brachyspira murdochii DSM 12563 ABC transporter YP_003634708.1 2751950 D 526224 CDS YP_003634709.1 296127457 9143444 complement(2752995..2753669) 1 NC_014150.1 PFAM: Suppressor of fused; KEGG: cbt:CLH_2457 BtrU protein; Suppressor of fused 2753669 9143444 Bmur_2440 Brachyspira murdochii DSM 12563 Suppressor of fused YP_003634709.1 2752995 R 526224 CDS YP_003634710.1 296127458 9143445 2753814..2755877 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00970 TPR domain-containing protein; hypothetical protein 2755877 9143445 Bmur_2441 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634710.1 2753814 D 526224 CDS YP_003634711.1 296127459 9143446 complement(2755874..2758243) 1 NC_014150.1 KEGG: bhy:BHWA1_00969 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 2758243 9143446 Bmur_2442 Brachyspira murdochii DSM 12563 lipoprotein YP_003634711.1 2755874 R 526224 CDS YP_003634712.1 296127460 9143447 complement(2758268..2759656) 1 NC_014150.1 KEGG: fjo:Fjoh_2580 hypothetical protein; hypothetical protein 2759656 9143447 Bmur_2443 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634712.1 2758268 R 526224 CDS YP_003634713.1 296127461 9143448 complement(2759689..2761509) 1 NC_014150.1 PFAM: protein of unknown function DUF262; KEGG: shi:Shel_19080 hypothetical protein; hypothetical protein 2761509 9143448 Bmur_2444 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634713.1 2759689 R 526224 CDS YP_003634714.1 296127462 9143449 complement(2761532..2762785) 1 NC_014150.1 TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; KEGG: bhy:BHWA1_00968 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 2762785 9143449 Bmur_2445 Brachyspira murdochii DSM 12563 MiaB family RNA modification protein YP_003634714.1 2761532 R 526224 CDS YP_003634715.1 296127463 9143450 2763062..2765056 1 NC_014150.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: bhy:BHWA1_00967 cell division protein FtsZ; SMART: Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 2765056 9143450 Bmur_2446 Brachyspira murdochii DSM 12563 cell division protein FtsZ YP_003634715.1 2763062 D 526224 CDS YP_003634716.1 296127464 9143451 2765072..2767009 1 NC_014150.1 KEGG: bhy:BHWA1_00966 TPR domain-containing protein; hypothetical protein 2767009 9143451 Bmur_2447 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634716.1 2765072 D 526224 CDS YP_003634717.1 296127465 9143452 2767012..2767632 1 NC_014150.1 TIGRFAM: dephospho-CoA kinase; KEGG: bhy:BHWA1_00965 dephospho-CoA kinase; dephospho-CoA kinase 2767632 9143452 Bmur_2448 Brachyspira murdochii DSM 12563 dephospho-CoA kinase YP_003634717.1 2767012 D 526224 CDS YP_003634718.1 296127466 9143453 2767589..2768395 1 NC_014150.1 PFAM: sporulation domain protein; KEGG: bhy:BHWA1_00964 sporulation related repeat protein; sporulation domain protein 2768395 9143453 Bmur_2449 Brachyspira murdochii DSM 12563 sporulation domain protein YP_003634718.1 2767589 D 526224 CDS YP_003634719.1 296127467 9143454 complement(2768464..2769522) 1 NC_014150.1 KEGG: bhy:BHWA1_00963 thiamine biosynthesis protein; thiamine biosynthesis protein 2769522 9143454 Bmur_2450 Brachyspira murdochii DSM 12563 thiamine biosynthesis protein YP_003634719.1 2768464 R 526224 CDS YP_003634720.1 296127468 9143455 complement(2769835..2771073) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2771073 9143455 Bmur_2451 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634720.1 2769835 R 526224 CDS YP_003634721.1 296127469 9143456 complement(2771475..2772017) 1 NC_014150.1 PFAM: protein of unknown function DUF208; KEGG: bhy:BHWA1_02598 hypothetical protein; hypothetical protein 2772017 9143456 Bmur_2452 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634721.1 2771475 R 526224 CDS YP_003634722.1 296127470 9143457 complement(2772029..2773261) 1 NC_014150.1 KEGG: bhy:BHWA1_02597 hypothetical protein; hypothetical protein 2773261 9143457 Bmur_2453 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634722.1 2772029 R 526224 CDS YP_003634723.1 296127471 9143458 complement(2773447..2774262) 1 NC_014150.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_02608 4Fe-4S ferredoxin, iron- sulfur binding domain protein; 4Fe-4S ferredoxin 2774262 9143458 Bmur_2454 Brachyspira murdochii DSM 12563 4Fe-4S ferredoxin YP_003634723.1 2773447 R 526224 CDS YP_003634724.1 296127472 9143459 2774484..2775500 1 NC_014150.1 KEGG: bhy:BHWA1_02609 membrane protein containing von Willebrand factor (vWA) type A domain; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor A 2775500 9143459 Bmur_2455 Brachyspira murdochii DSM 12563 von Willebrand factor A YP_003634724.1 2774484 D 526224 CDS YP_003634725.1 296127473 9143460 2775549..2776400 1 NC_014150.1 KEGG: bhy:BHWA1_02610 aerotolerance- related exported protein BatC containing TPR domain; aerotolerance-related exported protein BatC containing TPR domain 2776400 9143460 Bmur_2456 Brachyspira murdochii DSM 12563 aerotolerance-related exported protein BatC containing TPR domain YP_003634725.1 2775549 D 526224 CDS YP_003634726.1 296127474 9143461 2776369..2778099 1 NC_014150.1 KEGG: bhy:BHWA1_02611 hypothetical protein; hypothetical protein 2778099 9143461 Bmur_2457 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634726.1 2776369 D 526224 CDS YP_003634727.1 296127475 9143462 2778124..2778807 1 NC_014150.1 PFAM: protein of unknown function DUF1058; KEGG: bhy:BHWA1_02612 aerotolerance-related exported protein BatE containing TPR domain; hypothetical protein 2778807 9143462 Bmur_2458 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634727.1 2778124 D 526224 CDS YP_003634728.1 296127476 9143463 2778834..2779892 1 NC_014150.1 KEGG: bhy:BHWA1_02613 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA methyl transferase-like; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase 2779892 9143463 Bmur_2459 Brachyspira murdochii DSM 12563 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase YP_003634728.1 2778834 D 526224 CDS YP_003634729.1 296127477 9143464 2780211..2780537 1 NC_014150.1 PFAM: protein of unknown function DUF74; KEGG: bhy:BHWA1_02464 hypothetical protein; hypothetical protein 2780537 9143464 Bmur_2460 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634729.1 2780211 D 526224 CDS YP_003634730.1 296127478 9143465 2780555..2781217 1 NC_014150.1 PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_02463 predicted Rossmann fold nucleotide-binding protein; hypothetical protein 2781217 9143465 Bmur_2461 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634730.1 2780555 D 526224 CDS YP_003634731.1 296127479 9143466 2781220..2781807 1 NC_014150.1 KEGG: bhy:BHWA1_02462 hypothetical protein; hypothetical protein 2781807 9143466 Bmur_2462 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634731.1 2781220 D 526224 CDS YP_003634732.1 296127480 9143467 complement(2782041..2782976) 1 NC_014150.1 KEGG: bhy:BHWA1_02468 periplasmic ATP/GTP-binding protein; periplasmic ATP/GTP-binding protein 2782976 9143467 Bmur_2463 Brachyspira murdochii DSM 12563 periplasmic ATP/GTP-binding protein YP_003634732.1 2782041 R 526224 CDS YP_003634733.1 296127481 9143468 2783148..2783588 1 NC_014150.1 PFAM: protein of unknown function UPF0074; KEGG: bhy:BHWA1_02469 Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 2783588 9143468 Bmur_2464 Brachyspira murdochii DSM 12563 BadM/Rrf2 family transcriptional regulator YP_003634733.1 2783148 D 526224 CDS YP_003634734.1 296127482 9143469 complement(2783616..2784272) 1 NC_014150.1 KEGG: bhy:BHWA1_02470 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 2784272 9143469 Bmur_2465 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003634734.1 2783616 R 526224 CDS YP_003634735.1 296127483 9143470 2784552..2786081 1 NC_014150.1 KEGG: bhy:BHWA1_02471 Na+/proline symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS sodium solute transporter superfamily protein 2786081 9143470 Bmur_2466 Brachyspira murdochii DSM 12563 SSS sodium solute transporter superfamily protein YP_003634735.1 2784552 D 526224 CDS YP_003634736.1 296127484 9143471 2786094..2787245 1 NC_014150.1 KEGG: bhy:BHWA1_02472 hypothetical protein; TIGRFAM: cyclically-permuted mutatrotase; PFAM: Kelch repeat-containing protein; cyclically-permuted mutatrotase 2787245 9143471 Bmur_2467 Brachyspira murdochii DSM 12563 cyclically-permuted mutatrotase YP_003634736.1 2786094 D 526224 CDS YP_003634737.1 296127485 9143472 2787430..2788584 1 NC_014150.1 PFAM: phosphoryl transfer system HPr; KEGG: bhy:BHWA1_00937 phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 2788584 9143472 Bmur_2468 Brachyspira murdochii DSM 12563 phosphotransferase system, phosphocarrier protein HPr YP_003634737.1 2787430 D 526224 CDS YP_003634738.1 296127486 9143473 2788599..2789294 1 NC_014150.1 PFAM: metallophosphoesterase; KEGG: bhy:BHWA1_00936 Metallophos, calcineurin-like phosphoesterase; metallophosphoesterase 2789294 9143473 Bmur_2469 Brachyspira murdochii DSM 12563 metallophosphoesterase YP_003634738.1 2788599 D 526224 CDS YP_003634739.1 296127487 9143474 2789314..2789598 1 NC_014150.1 KEGG: bhy:BHWA1_00935 hypothetical protein; hypothetical protein 2789598 9143474 Bmur_2470 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634739.1 2789314 D 526224 CDS YP_003634740.1 296127488 9143475 2789671..2790579 1 NC_014150.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: bhy:BHWA1_00934 divergent polysaccharide deacetylase; hypothetical protein 2790579 9143475 Bmur_2471 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634740.1 2789671 D 526224 CDS YP_003634741.1 296127489 9143476 2790617..2791855 1 NC_014150.1 KEGG: bhy:BHWA1_00933 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 2791855 9143476 Bmur_2472 Brachyspira murdochii DSM 12563 diaminopimelate decarboxylase YP_003634741.1 2790617 D 526224 CDS YP_003634742.1 296127490 9143477 complement(2791985..2792446) 1 NC_014150.1 KEGG: bhy:BHWA1_00932 iron dependend repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; DtxR family iron (metal) dependent repressor 2792446 9143477 Bmur_2473 Brachyspira murdochii DSM 12563 DtxR family iron (metal) dependent repressor YP_003634742.1 2791985 R 526224 CDS YP_003634743.1 296127491 9143478 2792649..2793332 1 NC_014150.1 KEGG: bhy:BHWA1_00931 OmpR; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator, winged helix family 2793332 9143478 Bmur_2474 Brachyspira murdochii DSM 12563 two component transcriptional regulator, winged helix family YP_003634743.1 2792649 D 526224 CDS YP_003634744.1 296127492 9143479 2793340..2795097 1 NC_014150.1 KEGG: bhy:BHWA1_00930 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; multi-sensor signal transduction histidine kinase 2795097 9143479 Bmur_2475 Brachyspira murdochii DSM 12563 multi-sensor signal transduction histidine kinase YP_003634744.1 2793340 D 526224 CDS YP_003634745.1 296127493 9143480 2795179..2795388 1 NC_014150.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bhy:BHWA1_00929 CopZ, copper chaperone; heavy metal transport/detoxification protein 2795388 9143480 Bmur_2476 Brachyspira murdochii DSM 12563 heavy metal transport/detoxification protein YP_003634745.1 2795179 D 526224 CDS YP_003634746.1 296127494 9143481 2795389..2795973 1 NC_014150.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; KEGG: bhy:BHWA1_00928 Holliday junction DNA helicase RuvA; SMART: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote; Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA 2795973 9143481 Bmur_2477 Brachyspira murdochii DSM 12563 Holliday junction DNA helicase RuvA YP_003634746.1 2795389 D 526224 CDS YP_003634747.1 296127495 9143482 2796059..2796562 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00927 acetyltransferase; N-acetyltransferase GCN5 2796562 9143482 Bmur_2478 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003634747.1 2796059 D 526224 CDS YP_003634748.1 296127496 9143483 2798044..2799837 1 NC_014150.1 KEGG: bhy:BHWA1_01100 phosphoenolpyruvate carboxykinase (GTP); PFAM: phosphoenolpyruvate carboxykinase (GTP); phosphoenolpyruvate carboxykinase 2799837 9143483 Bmur_2479 Brachyspira murdochii DSM 12563 phosphoenolpyruvate carboxykinase YP_003634748.1 2798044 D 526224 CDS YP_003634749.1 296127497 9143484 2800014..2801186 1 NC_014150.1 KEGG: bhy:BHWA1_01098 hypothetical protein; hypothetical protein 2801186 9143484 Bmur_2480 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634749.1 2800014 D 526224 CDS YP_003634750.1 296127498 9143485 complement(2801262..2802437) 1 NC_014150.1 KEGG: bhy:BHWA1_01096 ankyrin repeat-containing protein; PFAM: ankyrin; SMART: ankyrin; ankyrin 2802437 9143485 Bmur_2481 Brachyspira murdochii DSM 12563 ankyrin YP_003634750.1 2801262 R 526224 CDS YP_003634751.1 296127499 9143486 2802598..2803263 1 NC_014150.1 PFAM: class II aldolase/adducin family protein; KEGG: bhy:BHWA1_00758 L-fuculose phosphate aldolase; class II aldolase/adducin family protein 2803263 9143486 Bmur_2482 Brachyspira murdochii DSM 12563 class II aldolase/adducin family protein YP_003634751.1 2802598 D 526224 CDS YP_003634752.1 296127500 9143487 2804011..2805090 1 NC_014150.1 KEGG: bhy:BHWA1_02407 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl- phosphate synthase small chain; carbamoyl-phosphate synthase small subunit 2805090 9143487 Bmur_2483 Brachyspira murdochii DSM 12563 carbamoyl-phosphate synthase small subunit YP_003634752.1 2804011 D 526224 CDS YP_003634753.1 296127501 9143488 2805083..2808274 1 NC_014150.1 KEGG: bhy:BHWA1_02406 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit 2808274 9143488 Bmur_2484 Brachyspira murdochii DSM 12563 carbamoyl-phosphate synthase large subunit YP_003634753.1 2805083 D 526224 CDS YP_003634754.1 296127502 9143489 2808389..2809012 1 NC_014150.1 KEGG: bhy:BHWA1_00761 hypothetical protein; hypothetical protein 2809012 9143489 Bmur_2485 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634754.1 2808389 D 526224 CDS YP_003634755.1 296127503 9143490 2809519..2811561 1 NC_014150.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; Radical SAM domain protein; KEGG: bhy:BHWA1_00207 GTPase ObgE; SMART: Elongator protein 3/MiaB/NifB; GTP-binding protein Obg/CgtA 2811561 9143490 Bmur_2486 Brachyspira murdochii DSM 12563 GTP-binding protein Obg/CgtA YP_003634755.1 2809519 D 526224 CDS YP_003634756.1 296127504 9143491 2811607..2813226 1 NC_014150.1 KEGG: bhy:BHWA1_00759 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2813226 9143491 Bmur_2487 Brachyspira murdochii DSM 12563 gamma-glutamyltransferase YP_003634756.1 2811607 D 526224 CDS YP_003634757.1 296127505 9143492 complement(2813307..2813744) 1 NC_014150.1 PFAM: RbsD or FucU transport; KEGG: pmo:Pmob_1603 RbsD or FucU transport; transport protein RbsD/FucU 2813744 9143492 Bmur_2488 Brachyspira murdochii DSM 12563 transport protein RbsD/FucU YP_003634757.1 2813307 R 526224 CDS YP_003634758.1 296127506 9143493 complement(2813824..2815605) 1 NC_014150.1 TIGRFAM: L-fucose isomerase; KEGG: hor:Hore_09570 L-fucose isomerase; PFAM: L-fucose isomerase _1 domain protein; L- fucose isomerase-like-like; L-fucose isomerase _2 domain protein; L-fucose isomerase 2815605 9143493 Bmur_2489 Brachyspira murdochii DSM 12563 L-fucose isomerase YP_003634758.1 2813824 R 526224 CDS YP_003634759.1 296127507 9143494 complement(2815641..2816663) 1 NC_014150.1 KEGG: cpy:Cphy_2012 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 2816663 9143494 Bmur_2490 Brachyspira murdochii DSM 12563 LacI family transcriptional regulator YP_003634759.1 2815641 R 526224 CDS YP_003634760.1 296127508 9143495 complement(2816692..2817909) 1 NC_014150.1 PFAM: inner-membrane translocator; KEGG: cpy:Cphy_2011 monosaccharide-transporting ATPase; inner-membrane translocator 2817909 9143495 Bmur_2491 Brachyspira murdochii DSM 12563 inner-membrane translocator YP_003634760.1 2816692 R 526224 CDS YP_003634761.1 296127509 9143496 complement(2817953..2819449) 1 NC_014150.1 KEGG: cpy:Cphy_2010 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2819449 9143496 Bmur_2492 Brachyspira murdochii DSM 12563 ABC transporter YP_003634761.1 2817953 R 526224 CDS YP_003634762.1 296127510 9143497 2819691..2821103 1 NC_014150.1 PFAM: carbohydrate kinase, FGGY-like; KEGG: csc:Csac_0989 carbohydrate kinase, FGGY; FGGY-like carbohydrate kinase 2821103 9143497 Bmur_2493 Brachyspira murdochii DSM 12563 FGGY-like carbohydrate kinase YP_003634762.1 2819691 D 526224 CDS YP_003634763.1 296127511 9143498 2821134..2821802 1 NC_014150.1 KEGG: bhy:BHWA1_00758 L-fuculose phosphate aldolase; PFAM: class II aldolase/adducin family protein; L-fuculose phosphate aldolase 2821802 9143498 Bmur_2494 Brachyspira murdochii DSM 12563 L-fuculose phosphate aldolase YP_003634763.1 2821134 D 526224 CDS YP_003634764.1 296127512 9143499 2821876..2823024 1 NC_014150.1 KEGG: bvu:BVU_1251 L-1,2-propanediol oxidoreductase; TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; lactaldehyde reductase 2823024 9143499 Bmur_2495 Brachyspira murdochii DSM 12563 lactaldehyde reductase YP_003634764.1 2821876 D 526224 CDS YP_003634765.1 296127513 9143500 complement(2823098..2823856) 1 NC_014150.1 SMART: beta-lactamase domain protein; KEGG: bhy:BHWA1_00300 metal-dependent hydrolase; beta-lactamase 2823856 9143500 Bmur_2496 Brachyspira murdochii DSM 12563 beta-lactamase YP_003634765.1 2823098 R 526224 CDS YP_003634766.1 296127514 9143502 complement(2824598..2825143) 1 NC_014150.1 KEGG: bhy:BHWA1_00781 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; 2'-5' RNA ligase 2825143 9143502 Bmur_2498 Brachyspira murdochii DSM 12563 2'-5' RNA ligase YP_003634766.1 2824598 R 526224 CDS YP_003634767.1 296127515 9143503 complement(2825179..2825775) 1 NC_014150.1 KEGG: bhy:BHWA1_00780 hypothetical protein; hypothetical protein 2825775 9143503 Bmur_2499 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634767.1 2825179 R 526224 CDS YP_003634768.1 296127516 9143504 complement(2825917..2826636) 1 NC_014150.1 KEGG: bhy:BHWA1_00779 hypothetical protein; hypothetical protein 2826636 9143504 Bmur_2500 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634768.1 2825917 R 526224 CDS YP_003634769.1 296127517 9143505 complement(2826834..2827445) 1 NC_014150.1 KEGG: bhy:BHWA1_00778 GPR1/FUN34/YaaH family protein; GPR1/FUN34/YaaH family protein 2827445 9143505 Bmur_2501 Brachyspira murdochii DSM 12563 GPR1/FUN34/YaaH family protein YP_003634769.1 2826834 R 526224 CDS YP_003634770.1 296127518 9143506 complement(2828155..2829309) 1 NC_014150.1 KEGG: bhy:BHWA1_00777 SpoIIE, stage II sporulation protein E (SpoIIE); PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; response regulator receiver modulated serine phosphatase 2829309 9143506 Bmur_2502 Brachyspira murdochii DSM 12563 response regulator receiver modulated serine phosphatase YP_003634770.1 2828155 R 526224 CDS YP_003634771.1 296127519 9143507 complement(2829330..2830646) 1 NC_014150.1 PFAM: cell cycle protein; KEGG: bhy:BHWA1_00776 rod shape- determining protein RodA; cell cycle protein 2830646 9143507 Bmur_2503 Brachyspira murdochii DSM 12563 cell cycle protein YP_003634771.1 2829330 R 526224 CDS YP_003634772.1 296127520 9143508 complement(2830639..2832648) 1 NC_014150.1 TIGRFAM: penicillin-binding protein 2; KEGG: bhy:BHWA1_00775 transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2); PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 2832648 9143508 Bmur_2504 Brachyspira murdochii DSM 12563 penicillin-binding protein 2 YP_003634772.1 2830639 R 526224 CDS YP_003634773.1 296127521 9143509 complement(2832899..2833402) 1 NC_014150.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cbk:CLL_A1544 flavodoxin-like fold domain protein; NAD(P)H dehydrogenase (quinone) 2833402 9143509 Bmur_2505 Brachyspira murdochii DSM 12563 NAD(P)H dehydrogenase (quinone) YP_003634773.1 2832899 R 526224 CDS YP_003634774.1 296127522 9143510 complement(2833447..2834106) 1 NC_014150.1 KEGG: bhy:BHWA1_00658 hypothetical protein; hypothetical protein 2834106 9143510 Bmur_2506 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634774.1 2833447 R 526224 CDS YP_003634775.1 296127523 9143511 complement(2834146..2834832) 1 NC_014150.1 KEGG: bhy:BHWA1_00657 flavodoxin; flavodoxin 2834832 9143511 Bmur_2507 Brachyspira murdochii DSM 12563 flavodoxin YP_003634775.1 2834146 R 526224 CDS YP_003634776.1 296127524 9143512 complement(2834921..2835754) 1 NC_014150.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bfs:BF2136 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2835754 9143512 Bmur_2508 Brachyspira murdochii DSM 12563 short-chain dehydrogenase/reductase SDR YP_003634776.1 2834921 R 526224 CDS YP_003634777.1 296127525 9143513 complement(2835766..2836383) 1 NC_014150.1 KEGG: chy:CHY_1707 hypothetical protein; hypothetical protein 2836383 9143513 Bmur_2509 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634777.1 2835766 R 526224 CDS YP_003634778.1 296127526 9143514 complement(2836686..2837243) 1 NC_014150.1 KEGG: bhy:BHWA1_00656 flavodoxin; flavodoxin 2837243 9143514 Bmur_2510 Brachyspira murdochii DSM 12563 flavodoxin YP_003634778.1 2836686 R 526224 CDS YP_003634779.1 296127527 9143515 complement(2837363..2838208) 1 NC_014150.1 PFAM: carboxymuconolactone decarboxylase; KEGG: bhy:BHWA1_00655 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 2838208 9143515 Bmur_2511 Brachyspira murdochii DSM 12563 carboxymuconolactone decarboxylase YP_003634779.1 2837363 R 526224 CDS YP_003634780.1 296127528 9143516 complement(2838228..2839073) 1 NC_014150.1 PFAM: aldo/keto reductase; KEGG: bhy:BHWA1_00654 aldo/keto reductase; aldo/keto reductase 2839073 9143516 Bmur_2512 Brachyspira murdochii DSM 12563 aldo/keto reductase YP_003634780.1 2838228 R 526224 CDS YP_003634781.1 296127529 9143517 complement(2839190..2839618) 1 NC_014150.1 KEGG: bhy:BHWA1_00653 hypothetical protein; hypothetical protein 2839618 9143517 Bmur_2513 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634781.1 2839190 R 526224 CDS YP_003634782.1 296127530 9143518 complement(2839661..2840185) 1 NC_014150.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bhy:BHWA1_00278 hypothetical protein; cupin 2840185 9143518 Bmur_2514 Brachyspira murdochii DSM 12563 cupin YP_003634782.1 2839661 R 526224 CDS YP_003634783.1 296127531 9143519 complement(2840307..2841902) 1 NC_014150.1 KEGG: bhy:BHWA1_00159 hypothetical protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein 2841902 9143519 Bmur_2515 Brachyspira murdochii DSM 12563 ComEC/Rec2-like protein YP_003634783.1 2840307 R 526224 CDS YP_003634784.1 296127532 9143520 complement(2841914..2842480) 1 NC_014150.1 PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_00160 transcriptional regulator; TetR family transcriptional regulator 2842480 9143520 Bmur_2516 Brachyspira murdochii DSM 12563 TetR family transcriptional regulator YP_003634784.1 2841914 R 526224 CDS YP_003634785.1 296127533 9143521 complement(2842563..2843321) 1 NC_014150.1 KEGG: bhy:BHWA1_00049 hypothetical protein; hypothetical protein 2843321 9143521 Bmur_2517 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634785.1 2842563 R 526224 CDS YP_003634786.1 296127534 9143522 complement(2843396..2845969) 1 NC_014150.1 PFAM: glycosyl transferase 51; penicillin- binding protein transpeptidase; KEGG: bhy:BHWA1_00050 penicillin-binding protein 2; glycosyl transferase 2845969 9143522 Bmur_2518 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003634786.1 2843396 R 526224 CDS YP_003634787.1 296127535 9143523 2846228..2848069 1 NC_014150.1 KEGG: bhy:BHWA1_00052 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2848069 9143523 Bmur_2519 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634787.1 2846228 D 526224 CDS YP_003634788.1 296127536 9143524 complement(2848478..2849224) 1 NC_014150.1 PFAM: glycoside hydrolase 13 domain protein; KEGG: bhy:BHWA1_02627 AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD); glycoside hydrolase 13 2849224 9143524 Bmur_2520 Brachyspira murdochii DSM 12563 glycoside hydrolase 13 YP_003634788.1 2848478 R 526224 CDS YP_003634789.1 296127537 9143525 complement(2849232..2849681) 1 NC_014150.1 KEGG: bhy:BHWA1_02626 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; flagellar protein FliS 2849681 9143525 Bmur_2521 Brachyspira murdochii DSM 12563 flagellar protein FliS YP_003634789.1 2849232 R 526224 CDS YP_003634790.1 296127538 9143526 2849929..2850750 1 NC_014150.1 KEGG: bhy:BHWA1_02625 aldo/keto reductase; PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 2850750 9143526 Bmur_2522 Brachyspira murdochii DSM 12563 2,5-didehydrogluconate reductase YP_003634790.1 2849929 D 526224 CDS YP_003634791.1 296127539 9143527 2850890..2852326 1 NC_014150.1 KEGG: bhy:BHWA1_01717 abortive infection protein; abortive infection protein 2852326 9143527 Bmur_2523 Brachyspira murdochii DSM 12563 abortive infection protein YP_003634791.1 2850890 D 526224 CDS YP_003634792.1 296127540 9143528 2852327..2853040 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 2853040 9143528 Bmur_2524 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634792.1 2852327 D 526224 CDS YP_003634793.1 296127541 9143529 2853143..2853571 1 NC_014150.1 KEGG: bhy:BHWA1_00844 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgB 2853571 9143529 Bmur_2525 Brachyspira murdochii DSM 12563 flagellar basal-body rod protein FlgB YP_003634793.1 2853143 D 526224 CDS YP_003634794.1 296127542 9143530 2853596..2854057 1 NC_014150.1 KEGG: bhy:BHWA1_00843 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body rod protein FlgC 2854057 9143530 Bmur_2526 Brachyspira murdochii DSM 12563 flagellar basal body rod protein FlgC YP_003634794.1 2853596 D 526224 CDS YP_003634795.1 296127543 9143531 2854101..2854430 1 NC_014150.1 KEGG: bhy:BHWA1_00842 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 2854430 9143531 Bmur_2527 Brachyspira murdochii DSM 12563 flagellar hook-basal body complex subunit FliE YP_003634795.1 2854101 D 526224 CDS YP_003634796.1 296127544 9143532 2854467..2855243 1 NC_014150.1 KEGG: bhy:BHWA1_00841 hypothetical protein; hypothetical protein 2855243 9143532 Bmur_2528 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634796.1 2854467 D 526224 CDS YP_003634797.1 296127545 9143533 2855426..2857039 1 NC_014150.1 KEGG: bhy:BHWA1_02582 integral membrane protein MviN, virulence factor; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 2857039 9143533 Bmur_2529 Brachyspira murdochii DSM 12563 integral membrane protein MviN YP_003634797.1 2855426 D 526224 CDS YP_003634798.1 296127546 9143534 2857120..2860014 1 NC_014150.1 KEGG: bhy:BHWA1_02583 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2860014 9143534 Bmur_2530 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634798.1 2857120 D 526224 CDS YP_003634799.1 296127547 9143535 2860146..2860532 1 NC_014150.1 PFAM: Flagellar protein FlgJ-like; KEGG: bhy:BHWA1_02584 hypothetical protein; Flagellar protein FlgJ-like protein 2860532 9143535 Bmur_2531 Brachyspira murdochii DSM 12563 Flagellar protein FlgJ-like protein YP_003634799.1 2860146 D 526224 CDS YP_003634800.1 296127548 9143536 2860564..2861001 1 NC_014150.1 KEGG: bhy:BHWA1_02585 hypothetical protein; hypothetical protein 2861001 9143536 Bmur_2532 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634800.1 2860564 D 526224 CDS YP_003634801.1 296127549 9143537 2861104..2862432 1 NC_014150.1 PFAM: TonB-dependent receptor; KEGG: bhy:BHWA1_02586 TonB-dependent receptor; TonB-dependent receptor 2862432 9143537 Bmur_2533 Brachyspira murdochii DSM 12563 TonB-dependent receptor YP_003634801.1 2861104 D 526224 CDS YP_003634802.1 296127550 9143538 2862492..2865272 1 NC_014150.1 SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix DNA- binding class 1; Helix-hairpin-helix domain protein class 2; TIGRFAM: DNA polymerase I; KEGG: bhy:BHWA1_02587 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; 5'- 3' exonuclease, N-terminal resolvase-like domain; DNA polymerase I 2865272 9143538 Bmur_2534 Brachyspira murdochii DSM 12563 DNA polymerase I YP_003634802.1 2862492 D 526224 CDS YP_003634803.1 296127551 9143539 complement(2865629..2866552) 1 NC_014150.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: bhy:BHWA1_00671 MiaA, tR delta(2)- isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 2866552 9143539 Bmur_2535 Brachyspira murdochii DSM 12563 tRNA delta(2)-isopentenylpyrophosphate transferase YP_003634803.1 2865629 R 526224 CDS YP_003634804.1 296127552 9143540 complement(2866558..2866971) 1 NC_014150.1 KEGG: bhy:BHWA1_00672 hypothetical protein; hypothetical protein 2866971 9143540 Bmur_2536 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634804.1 2866558 R 526224 CDS YP_003634805.1 296127553 9143541 complement(2866997..2867548) 1 NC_014150.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bhy:BHWA1_00673 guanylate kinase; PFAM: guanylate kinase; guanylate kinase 2867548 9143541 Bmur_2537 Brachyspira murdochii DSM 12563 guanylate kinase YP_003634805.1 2866997 R 526224 CDS YP_003634806.1 296127554 9143542 2867804..2869249 1 NC_014150.1 KEGG: bhy:BHWA1_00674 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 2869249 9143542 Bmur_2538 Brachyspira murdochii DSM 12563 glutamyl-tRNA synthetase YP_003634806.1 2867804 D 526224 CDS YP_003634807.1 296127555 9143543 2869267..2869659 1 NC_014150.1 KEGG: bhy:BHWA1_00675 REC, signal receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2869659 9143543 Bmur_2539 Brachyspira murdochii DSM 12563 response regulator receiver protein YP_003634807.1 2869267 D 526224 CDS YP_003634808.1 296127556 9143544 complement(2870162..2870371) 1 NC_014150.1 KEGG: bhy:BHWA1_00676 hypothetical protein; hypothetical protein 2870371 9143544 Bmur_2540 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634808.1 2870162 R 526224 CDS YP_003634809.1 296127557 9143545 complement(2870395..2870841) 1 NC_014150.1 PFAM: SCP-like extracellular; KEGG: bhy:BHWA1_00677 SCP-like extracellular protein; hypothetical protein 2870841 9143545 Bmur_2541 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634809.1 2870395 R 526224 CDS YP_003634810.1 296127558 9143546 complement(2870929..2871876) 1 NC_014150.1 KEGG: bhy:BHWA1_00678 ADP-L-glycero-D-manno-heptose- 6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; ADP-L-glycero-D-manno-heptose-6-epimerase 2871876 9143546 Bmur_2542 Brachyspira murdochii DSM 12563 ADP-L-glycero-D-manno-heptose-6-epimerase YP_003634810.1 2870929 R 526224 CDS YP_003634811.1 296127559 9143547 complement(2871899..2872357) 1 NC_014150.1 KEGG: bhy:BHWA1_00679 RfaE, ADP-heptose synthase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; rfaE bifunctional protein 2872357 9143547 Bmur_2543 Brachyspira murdochii DSM 12563 rfaE bifunctional protein YP_003634811.1 2871899 R 526224 CDS YP_003634812.1 296127560 9143548 complement(2872444..2873433) 1 NC_014150.1 SMART: regulatory protein LacI; KEGG: cpf:CPF_2817 LacI family transcription regulator; LacI family transcriptional regulator 2873433 9143548 Bmur_2544 Brachyspira murdochii DSM 12563 LacI family transcriptional regulator YP_003634812.1 2872444 R 526224 CDS YP_003634813.1 296127561 9143549 complement(2873882..2874469) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 2874469 9143549 Bmur_2545 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634813.1 2873882 R 526224 CDS YP_003634814.1 296127562 9143550 complement(2874462..2875163) 1 NC_014150.1 KEGG: conserved hypothetical protein; hypothetical protein 2875163 9143550 Bmur_2546 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634814.1 2874462 R 526224 CDS YP_003634815.1 296127563 9143551 complement(2875262..2878492) 1 NC_014150.1 KEGG: dth:DICTH_1776 type IIS restriction endonuclease; type IIS restriction endonuclease 2878492 9143551 Bmur_2547 Brachyspira murdochii DSM 12563 type IIS restriction endonuclease YP_003634815.1 2875262 R 526224 CDS YP_003634816.1 296127564 9143552 2879123..2879386 1 NC_014150.1 KEGG: cbh:CLC_3167 hypothetical protein; hypothetical protein 2879386 9143552 Bmur_2548 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634816.1 2879123 D 526224 CDS YP_003634817.1 296127565 9143553 2879397..2880503 1 NC_014150.1 PFAM: permease; KEGG: pth:PTH_0570 permease; permease 2880503 9143553 Bmur_2549 Brachyspira murdochii DSM 12563 permease YP_003634817.1 2879397 D 526224 CDS YP_003634818.1 296127566 9143554 2880497..2880949 1 NC_014150.1 KEGG: cdl:CDR20291_2253 hypothetical protein; hypothetical protein 2880949 9143554 Bmur_2550 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634818.1 2880497 D 526224 CDS YP_003634819.1 296127567 9143555 2880985..2882151 1 NC_014150.1 KEGG: pth:PTH_0572 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2882151 9143555 Bmur_2551 Brachyspira murdochii DSM 12563 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_003634819.1 2880985 D 526224 CDS YP_003634820.1 296127568 9143556 2882193..2883020 1 NC_014150.1 KEGG: pth:PTH_0573 hypothetical protein; hypothetical protein 2883020 9143556 Bmur_2552 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634820.1 2882193 D 526224 CDS YP_003634821.1 296127569 9143557 2882972..2883799 1 NC_014150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pth:PTH_0574 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; nitrate/sulfonate/bicarbonate ABC transporter permease 2883799 9143557 Bmur_2553 Brachyspira murdochii DSM 12563 nitrate/sulfonate/bicarbonate ABC transporter permease YP_003634821.1 2882972 D 526224 CDS YP_003634822.1 296127570 9143558 2883786..2884565 1 NC_014150.1 KEGG: cby:CLM_3660 nitrate transport ATP-binding protein NrtD; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter ATP-binding protein 2884565 9143558 Bmur_2554 Brachyspira murdochii DSM 12563 ABC transporter ATP-binding protein YP_003634822.1 2883786 D 526224 CDS YP_003634823.1 296127571 9143559 2884629..2884961 1 NC_014150.1 KEGG: cdl:CDR20291_2256 hypothetical protein; hypothetical protein 2884961 9143559 Bmur_2555 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634823.1 2884629 D 526224 CDS YP_003634824.1 296127572 9143560 2884971..2885456 1 NC_014150.1 KEGG: sfu:Sfum_3948 hypothetical protein; hypothetical protein 2885456 9143560 Bmur_2556 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634824.1 2884971 D 526224 CDS YP_003634825.1 296127573 9143561 complement(2885663..2889016) 1 NC_014150.1 KEGG: kol:Kole_1972 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; helicase domain-containing protein 2889016 9143561 Bmur_2557 Brachyspira murdochii DSM 12563 helicase domain-containing protein YP_003634825.1 2885663 R 526224 CDS YP_003634826.1 296127574 9143562 complement(2889359..2890792) 1 NC_014150.1 KEGG: bhy:BHWA1_02622 hypothetical protein; hypothetical protein 2890792 9143562 Bmur_2558 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634826.1 2889359 R 526224 CDS YP_003634827.1 296127575 9143563 complement(2890789..2892555) 1 NC_014150.1 KEGG: bhy:BHWA1_02623 phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoenolpyruvate-protein phosphotransferase 2892555 9143563 Bmur_2559 Brachyspira murdochii DSM 12563 phosphoenolpyruvate-protein phosphotransferase YP_003634827.1 2890789 R 526224 CDS YP_003634828.1 296127576 9143564 complement(2892815..2893531) 1 NC_014150.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: bhy:BHWA1_02624 5'-methylthioadenosine; S- adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase 1; MTA/SAH nucleosidase 2893531 9143564 Bmur_2560 Brachyspira murdochii DSM 12563 MTA/SAH nucleosidase YP_003634828.1 2892815 R 526224 CDS YP_003634829.1 296127577 9143565 2893743..2895371 1 NC_014150.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: apl:APL_0852 FAD flavoprotein oxidase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2895371 9143565 Bmur_2561 Brachyspira murdochii DSM 12563 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_003634829.1 2893743 D 526224 CDS YP_003634830.1 296127578 9143567 2895829..2897259 1 NC_014150.1 KEGG: bhy:BHWA1_01262 hypothetical protein; hypothetical protein 2897259 9143567 Bmur_2562 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634830.1 2895829 D 526224 CDS YP_003634831.1 296127579 9143568 complement(2897611..2898378) 1 NC_014150.1 PFAM: protein of unknown function DUF81; KEGG: bhy:BHWA1_00032 transporter/membrane; hypothetical protein 2898378 9143568 Bmur_2563 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634831.1 2897611 R 526224 CDS YP_003634832.1 296127580 9143569 2898750..2899961 1 NC_014150.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bhy:BHWA1_00033 spore coat polysaccharide biosynthesis protein SpsC; DegT/DnrJ/EryC1/StrS aminotransferase 2899961 9143569 Bmur_2564 Brachyspira murdochii DSM 12563 DegT/DnrJ/EryC1/StrS aminotransferase YP_003634832.1 2898750 D 526224 CDS YP_003634833.1 296127581 9143570 2900007..2900948 1 NC_014150.1 KEGG: bhy:BHWA1_00073 hypothetical protein; hypothetical protein 2900948 9143570 Bmur_2565 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634833.1 2900007 D 526224 CDS YP_003634834.1 296127582 9143571 2901385..2902344 1 NC_014150.1 PFAM: glycoside hydrolase 3 domain protein; KEGG: bhy:BHWA1_00035 hypothetical protein; glycoside hydrolase 3 2902344 9143571 Bmur_2566 Brachyspira murdochii DSM 12563 glycoside hydrolase 3 YP_003634834.1 2901385 D 526224 CDS YP_003634835.1 296127583 9143572 2902308..2903411 1 NC_014150.1 PFAM: glycoside hydrolase 3 domain protein; KEGG: bhy:BHWA1_00036 beta-hexosaminidase; glycoside hydrolase 3 2903411 9143572 Bmur_2567 Brachyspira murdochii DSM 12563 glycoside hydrolase 3 YP_003634835.1 2902308 D 526224 CDS YP_003634836.1 296127584 9143573 complement(2903426..2903722) 1 NC_014150.1 KEGG: bhy:BHWA1_00037 hypothetical protein; hypothetical protein 2903722 9143573 Bmur_2568 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634836.1 2903426 R 526224 CDS YP_003634837.1 296127585 9143574 complement(2904069..2904713) 1 NC_014150.1 PFAM: formiminotransferase-cyclodeaminase; KEGG: bhy:BHWA1_00038 formiminotransferase- cyclodeaminase; formiminotransferase-cyclodeaminase 2904713 9143574 Bmur_2569 Brachyspira murdochii DSM 12563 formiminotransferase-cyclodeaminase YP_003634837.1 2904069 R 526224 CDS YP_003634838.1 296127586 9143575 complement(2904800..2904925) 1 NC_014150.1 KEGG: bhy:BHWA1_00127 hypothetical protein; hypothetical protein 2904925 9143575 Bmur_2570 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634838.1 2904800 R 526224 CDS YP_003634839.1 296127587 9143576 2905404..2906477 1 NC_014150.1 TIGRFAM: methyltransferase FkbM family; KEGG: cbb:CLD_3206 FkbM family methyltransferase; FkbM family methyltransferase 2906477 9143576 Bmur_2571 Brachyspira murdochii DSM 12563 FkbM family methyltransferase YP_003634839.1 2905404 D 526224 CDS YP_003634840.1 296127588 9143577 2906678..2909332 1 NC_014150.1 KEGG: bhy:BHWA1_00153 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 2909332 9143577 Bmur_2572 Brachyspira murdochii DSM 12563 valyl-tRNA synthetase YP_003634840.1 2906678 D 526224 CDS YP_003634841.1 296127589 9143578 complement(2909858..2910124) 1 NC_014150.1 KEGG: bhy:BHWA1_00152 plasmid encoded toxin Txe; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; Txe/YoeB family addiction module toxin 2910124 9143578 Bmur_2573 Brachyspira murdochii DSM 12563 Txe/YoeB family addiction module toxin YP_003634841.1 2909858 R 526224 CDS YP_003634842.1 296127590 9143579 complement(2910117..2910383) 1 NC_014150.1 KEGG: bhy:BHWA1_00151 DNA-damage-inducible protein J TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; RelB/DinJ family addiction module antitoxin 2910383 9143579 Bmur_2574 Brachyspira murdochii DSM 12563 RelB/DinJ family addiction module antitoxin YP_003634842.1 2910117 R 526224 CDS YP_003634843.1 296127591 9143580 2910554..2911591 1 NC_014150.1 PFAM: serpulina hyodysenteriae variable surface protein; KEGG: bhy:BHWA1_00889 variable surface protein A; serpulina hyodysenteriae variable surface protein 2911591 9143580 Bmur_2575 Brachyspira murdochii DSM 12563 serpulina hyodysenteriae variable surface protein YP_003634843.1 2910554 D 526224 CDS YP_003634844.1 296127592 9143581 complement(2911769..2912602) 1 NC_014150.1 KEGG: bhy:BHWA1_00025 hypothetical protein; hypothetical protein 2912602 9143581 Bmur_2576 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634844.1 2911769 R 526224 CDS YP_003634845.1 296127593 9143582 2912819..2913574 1 NC_014150.1 KEGG: bhy:BHWA1_00029 hypothetical protein; hypothetical protein 2913574 9143582 Bmur_2577 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634845.1 2912819 D 526224 CDS YP_003634846.1 296127594 9143583 2913672..2914277 1 NC_014150.1 KEGG: bhy:BHWA1_00030 hypothetical protein; hypothetical protein 2914277 9143583 Bmur_2578 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634846.1 2913672 D 526224 CDS YP_003634847.1 296127595 9143584 2914362..2915918 1 NC_014150.1 KEGG: bhy:BHWA1_02536 hypothetical protein; hypothetical protein 2915918 9143584 Bmur_2579 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634847.1 2914362 D 526224 CDS YP_003634848.1 296127596 9143585 complement(2915924..2916757) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00031 glycosyltransferase; glycosyl transferase 2916757 9143585 Bmur_2580 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003634848.1 2915924 R 526224 CDS YP_003634849.1 296127597 9143586 complement(2916929..2918914) 1 NC_014150.1 PFAM: TonB-dependent receptor plug; KEGG: bhy:BHWA1_00392 outer membrane receptor; TonB-dependent receptor plug 2918914 9143586 Bmur_2581 Brachyspira murdochii DSM 12563 TonB-dependent receptor plug YP_003634849.1 2916929 R 526224 CDS YP_003634850.1 296127598 9143587 complement(2918978..2919541) 1 NC_014150.1 KEGG: bhy:BHWA1_00393 hypothetical protein; hypothetical protein 2919541 9143587 Bmur_2582 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634850.1 2918978 R 526224 CDS YP_003634851.1 296127599 9143588 complement(2920002..2920955) 1 NC_014150.1 KEGG: bhy:BHWA1_00073 hypothetical protein; hypothetical protein 2920955 9143588 Bmur_2583 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634851.1 2920002 R 526224 CDS YP_003634852.1 296127600 9143589 2921299..2922267 1 NC_014150.1 PFAM: protein of unknown function DUF534; KEGG: bhy:BHWA1_00396 ABC transporter, periplasmic component; hypothetical protein 2922267 9143589 Bmur_2584 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634852.1 2921299 D 526224 CDS YP_003634853.1 296127601 9143590 2922316..2923224 1 NC_014150.1 PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_00397 hypothetical protein; inner-membrane translocator 2923224 9143590 Bmur_2585 Brachyspira murdochii DSM 12563 inner-membrane translocator YP_003634853.1 2922316 D 526224 CDS YP_003634854.1 296127602 9143591 2923240..2924028 1 NC_014150.1 KEGG: bhy:BHWA1_00398 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2924028 9143591 Bmur_2586 Brachyspira murdochii DSM 12563 ABC transporter YP_003634854.1 2923240 D 526224 CDS YP_003634855.1 296127603 9143592 2924158..2926104 1 NC_014150.1 KEGG: bhy:BHWA1_00260 hypothetical protein; hypothetical protein 2926104 9143592 Bmur_2587 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634855.1 2924158 D 526224 CDS YP_003634856.1 296127604 9143593 2926175..2926690 1 NC_014150.1 KEGG: bhy:BHWA1_01805 hypothetical membrane protein; hypothetical protein 2926690 9143593 Bmur_2588 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634856.1 2926175 D 526224 CDS YP_003634857.1 296127605 9143594 2926683..2927210 1 NC_014150.1 KEGG: bhy:BHWA1_01804 ComFC, predicted amidophosphoribosyltransferase; amidophosphoribosyltransferase ComFC 2927210 9143594 Bmur_2589 Brachyspira murdochii DSM 12563 amidophosphoribosyltransferase ComFC YP_003634857.1 2926683 D 526224 CDS YP_003634858.1 296127606 9143595 2927241..2928074 1 NC_014150.1 PFAM: DinB family protein; KEGG: bhy:BHWA1_01872 DinB family protein; DinB family protein 2928074 9143595 Bmur_2590 Brachyspira murdochii DSM 12563 DinB family protein YP_003634858.1 2927241 D 526224 CDS YP_003634859.1 296127607 9143596 complement(2928791..2929696) 1 NC_014150.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bhy:BHWA1_00196 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2929696 9143596 Bmur_2591 Brachyspira murdochii DSM 12563 phosphatidate cytidylyltransferase YP_003634859.1 2928791 R 526224 CDS YP_003634860.1 296127608 9143597 complement(2929704..2930420) 1 NC_014150.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: bhy:BHWA1_00197 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 2930420 9143597 Bmur_2592 Brachyspira murdochii DSM 12563 undecaprenyl diphosphate synthase YP_003634860.1 2929704 R 526224 CDS YP_003634861.1 296127609 9143598 complement(2930417..2930965) 1 NC_014150.1 KEGG: bhy:BHWA1_00198 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor 2930965 9143598 Bmur_2593 Brachyspira murdochii DSM 12563 ribosome recycling factor YP_003634861.1 2930417 R 526224 CDS YP_003634862.1 296127610 9143599 2931253..2931690 1 NC_014150.1 PFAM: protein of unknown function DUF523; KEGG: fma:FMG_1287 hypothetical protein; hypothetical protein 2931690 9143599 Bmur_2594 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634862.1 2931253 D 526224 CDS YP_003634863.1 296127611 9143600 2931729..2932706 1 NC_014150.1 KEGG: bhy:BHWA1_00199 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase 2932706 9143600 Bmur_2595 Brachyspira murdochii DSM 12563 mannose-6-phosphate isomerase YP_003634863.1 2931729 D 526224 CDS YP_003634864.1 296127612 9143601 2932708..2933490 1 NC_014150.1 KEGG: bhy:BHWA1_00200 ABC-type transport system, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2933490 9143601 Bmur_2596 Brachyspira murdochii DSM 12563 ABC transporter YP_003634864.1 2932708 D 526224 CDS YP_003634865.1 296127613 9143602 2933532..2934311 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00201 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component; hypothetical protein 2934311 9143602 Bmur_2597 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634865.1 2933532 D 526224 CDS YP_003634866.1 296127614 9143603 2934336..2935265 1 NC_014150.1 PFAM: inositol monophosphatase; KEGG: bhy:BHWA1_00202 inositol-1-monophosphatase; inositol monophosphatase 2935265 9143603 Bmur_2598 Brachyspira murdochii DSM 12563 inositol monophosphatase YP_003634866.1 2934336 D 526224 CDS YP_003634867.1 296127615 9143604 2935325..2936737 1 NC_014150.1 SMART: AAA ATPase; TIGRFAM: ATP synthase F1, beta subunit; KEGG: bhy:BHWA1_00203 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit beta 2936737 9143604 Bmur_2599 Brachyspira murdochii DSM 12563 ATP synthase F1 subunit beta YP_003634867.1 2935325 D 526224 CDS YP_003634868.1 296127616 9143605 2936817..2939672 1 NC_014150.1 KEGG: bhy:BHWA1_00205 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2939672 9143605 Bmur_2600 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634868.1 2936817 D 526224 CDS YP_003634869.1 296127617 9143606 2939694..2940905 1 NC_014150.1 PFAM: OmpA/MotB domain protein; KEGG: bhy:BHWA1_00206 outer membrane protein OmpA family; OmpA/MotB domain-containing protein 2940905 9143606 Bmur_2601 Brachyspira murdochii DSM 12563 OmpA/MotB domain-containing protein YP_003634869.1 2939694 D 526224 CDS YP_003634870.1 296127618 9143607 complement(2940955..2942172) 1 NC_014150.1 PFAM: amidohydrolase; KEGG: bhy:BHWA1_00045 dihydroorotase; amidohydrolase 2942172 9143607 Bmur_2602 Brachyspira murdochii DSM 12563 amidohydrolase YP_003634870.1 2940955 R 526224 CDS YP_003634871.1 296127619 9143608 complement(2942273..2943352) 1 NC_014150.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: bhy:BHWA1_00046 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase 2943352 9143608 Bmur_2603 Brachyspira murdochii DSM 12563 aspartate carbamoyltransferase YP_003634871.1 2942273 R 526224 CDS YP_003634872.1 296127620 9143609 2943692..2945548 1 NC_014150.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase domain protein; KEGG: bhy:BHWA1_00047 1-deoxy-D-xylulose-5- phosphate synthase; SMART: transketolase central region; deoxyxylulose-5-phosphate synthase 2945548 9143609 Bmur_2604 Brachyspira murdochii DSM 12563 deoxyxylulose-5-phosphate synthase YP_003634872.1 2943692 D 526224 CDS YP_003634873.1 296127621 9143610 complement(2945543..2946676) 1 NC_014150.1 KEGG: bhy:BHWA1_00048 hypothetical protein; hypothetical protein 2946676 9143610 Bmur_2605 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634873.1 2945543 R 526224 CDS YP_003634874.1 296127622 9143611 complement(2946810..2948192) 1 NC_014150.1 KEGG: bhy:BHWA1_00959 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA 2948192 9143611 Bmur_2606 Brachyspira murdochii DSM 12563 DNA repair protein RadA YP_003634874.1 2946810 R 526224 CDS YP_003634875.1 296127623 9143612 complement(2948202..2949071) 1 NC_014150.1 KEGG: bhy:BHWA1_02029 hypothetical protein; hypothetical protein 2949071 9143612 Bmur_2607 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634875.1 2948202 R 526224 CDS YP_003634876.1 296127624 9143613 complement(2949160..2951196) 1 NC_014150.1 PFAM: ABC-type uncharacterised transport system; KEGG: bhy:BHWA1_00958 ABC-type transport system protein involved in gliding motility auxiliary component-like protein; ABC transporter 2951196 9143613 Bmur_2608 Brachyspira murdochii DSM 12563 ABC transporter YP_003634876.1 2949160 R 526224 CDS YP_003634877.1 296127625 9143615 2951576..2952289 1 NC_014150.1 PFAM: pseudouridine synthase; KEGG: bhy:BHWA1_00955 pseudouridine synthase; pseudouridine synthase 2952289 9143615 Bmur_2609 Brachyspira murdochii DSM 12563 pseudouridine synthase YP_003634877.1 2951576 D 526224 CDS YP_003634878.1 296127626 9143618 2952709..2953908 1 NC_014150.1 PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00946 aspartate aminotransferase; class I and II aminotransferase 2953908 9143618 Bmur_2610 Brachyspira murdochii DSM 12563 class I and II aminotransferase YP_003634878.1 2952709 D 526224 CDS YP_003634879.1 296127627 9143619 complement(2953978..2955984) 1 NC_014150.1 KEGG: bhy:BHWA1_01021 hypothetical protein; hypothetical protein 2955984 9143619 Bmur_2611 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634879.1 2953978 R 526224 CDS YP_003634880.1 296127628 9143620 complement(2956385..2957647) 1 NC_014150.1 KEGG: bhy:BHWA1_00945 methylthioribose kinase; TIGRFAM: 5-methylthioribose kinase; 5-methylthioribose kinase 2957647 9143620 Bmur_2612 Brachyspira murdochii DSM 12563 5-methylthioribose kinase YP_003634880.1 2956385 R 526224 CDS YP_003634881.1 296127629 9143621 complement(2957674..2958723) 1 NC_014150.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: bhy:BHWA1_00944 methylthioribose-1-phosphate isomerase; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 2958723 9143621 Bmur_2613 Brachyspira murdochii DSM 12563 translation initiation factor, aIF-2BI family YP_003634881.1 2957674 R 526224 CDS YP_003634882.1 296127630 9143622 complement(2958796..2959746) 1 NC_014150.1 KEGG: cph:Cpha266_0829 radical SAM domain- containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2959746 9143622 Bmur_2614 Brachyspira murdochii DSM 12563 radical SAM protein YP_003634882.1 2958796 R 526224 CDS YP_003634883.1 296127631 9143623 complement(2960008..2960415) 1 NC_014150.1 KEGG: bhy:BHWA1_01020 rhodanese-like domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein 2960415 9143623 Bmur_2615 Brachyspira murdochii DSM 12563 Rhodanese domain-containing protein YP_003634883.1 2960008 R 526224 CDS YP_003634884.1 296127632 9143624 2960620..2961807 1 NC_014150.1 PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00801 transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family); GntR family transcriptional regulator 2961807 9143624 Bmur_2616 Brachyspira murdochii DSM 12563 GntR family transcriptional regulator YP_003634884.1 2960620 D 526224 CDS YP_003634885.1 296127633 9143625 2962114..2962722 1 NC_014150.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: bhy:BHWA1_00800 rubrerythrin; rubrerythrin 2962722 9143625 Bmur_2617 Brachyspira murdochii DSM 12563 rubrerythrin YP_003634885.1 2962114 D 526224 CDS YP_003634886.1 296127634 9143626 2962879..2963838 1 NC_014150.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: bhy:BHWA1_00799 signal recognition particle GTPase; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 2963838 9143626 Bmur_2618 Brachyspira murdochii DSM 12563 signal recognition particle-docking protein FtsY YP_003634886.1 2962879 D 526224 CDS YP_003634887.1 296127635 9143627 2963863..2965125 1 NC_014150.1 KEGG: bhy:BHWA1_00798 3-phosphoshikimate 1- carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 2965125 9143627 Bmur_2619 Brachyspira murdochii DSM 12563 3-phosphoshikimate 1-carboxyvinyltransferase YP_003634887.1 2963863 D 526224 CDS YP_003634888.1 296127636 9143628 complement(2965120..2966106) 1 NC_014150.1 PFAM: NMT1/THI5 like domain protein; KEGG: bhy:BHWA1_00797 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2966106 9143628 Bmur_2620 Brachyspira murdochii DSM 12563 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_003634888.1 2965120 R 526224 CDS YP_003634889.1 296127637 9143629 complement(2966233..2967225) 1 NC_014150.1 PFAM: NMT1/THI5 like domain protein; KEGG: bhy:BHWA1_00797 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2967225 9143629 Bmur_2621 Brachyspira murdochii DSM 12563 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_003634889.1 2966233 R 526224 CDS YP_003634890.1 296127638 9143630 complement(2967232..2967954) 1 NC_014150.1 PFAM: glycosyl transferase 2; KEGG: bhy:BHWA1_00785 glycosyl transferase 2; glycosyl transferase 2967954 9143630 Bmur_2622 Brachyspira murdochii DSM 12563 glycosyl transferase YP_003634890.1 2967232 R 526224 CDS YP_003634891.1 296127639 9143631 complement(2967951..2970662) 1 NC_014150.1 KEGG: bhy:BHWA1_00786 hypothetical protein; hypothetical protein 2970662 9143631 Bmur_2623 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634891.1 2967951 R 526224 CDS YP_003634892.1 296127640 9143632 complement(2970743..2971771) 1 NC_014150.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bhy:BHWA1_00787 predicted Fe-S-cluster redox enzyme; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2971771 9143632 Bmur_2624 Brachyspira murdochii DSM 12563 radical SAM protein YP_003634892.1 2970743 R 526224 CDS YP_003634893.1 296127641 9143633 complement(2971834..2972061) 1 NC_014150.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: bhy:BHWA1_00788 hypothetical protein; SMART: regulatory protein FmdB; FmdB family regulatory protein 2972061 9143633 Bmur_2625 Brachyspira murdochii DSM 12563 FmdB family regulatory protein YP_003634893.1 2971834 R 526224 CDS YP_003634894.1 296127642 9143634 complement(2972204..2973760) 1 NC_014150.1 KEGG: bhy:BHWA1_00789 xylulose kinase; PFAM: carbohydrate kinase, FGGY-like; xylulokinase 2973760 9143634 Bmur_2626 Brachyspira murdochii DSM 12563 xylulokinase YP_003634894.1 2972204 R 526224 CDS YP_003634895.1 296127643 9143635 complement(2973817..2975541) 1 NC_014150.1 KEGG: bhy:BHWA1_00790 D repair and genetic recombination protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 2975541 9143635 Bmur_2627 Brachyspira murdochii DSM 12563 DNA repair protein RecN YP_003634895.1 2973817 R 526224 CDS YP_003634896.1 296127644 9143636 complement(2975541..2976410) 1 NC_014150.1 PFAM: ATP-NAD/AcoX kinase; KEGG: bhy:BHWA1_00791 PpnK, inorganic polyphosphate/ATP-D kinase; ATP-NAD/AcoX kinase 2976410 9143636 Bmur_2628 Brachyspira murdochii DSM 12563 ATP-NAD/AcoX kinase YP_003634896.1 2975541 R 526224 CDS YP_003634897.1 296127645 9143637 2976520..2977257 1 NC_014150.1 KEGG: bhy:BHWA1_00792 1-acyl-sn-glycerol-3- phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2977257 9143637 Bmur_2629 Brachyspira murdochii DSM 12563 phospholipid/glycerol acyltransferase YP_003634897.1 2976520 D 526224 CDS YP_003634898.1 296127646 9143638 complement(2977608..2978720) 1 NC_014150.1 KEGG: hap:HAPS_1913 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase 2978720 9143638 Bmur_2630 Brachyspira murdochii DSM 12563 alanine dehydrogenase YP_003634898.1 2977608 R 526224 CDS YP_003634899.1 296127647 9143639 2979048..2980520 1 NC_014150.1 KEGG: bhy:BHWA1_00793 iron only hydrogenase large subunit, C-terminal domain protein; PFAM: hydrogenase large subunit domain protein; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; ferredoxin hydrogenase 2980520 9143639 Bmur_2631 Brachyspira murdochii DSM 12563 ferredoxin hydrogenase YP_003634899.1 2979048 D 526224 CDS YP_003634900.1 296127648 9143640 complement(2980605..2981237) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00794 ankyrin repeat-containing protein; ankyrin 2981237 9143640 Bmur_2632 Brachyspira murdochii DSM 12563 ankyrin YP_003634900.1 2980605 R 526224 CDS YP_003634901.1 296127649 9143641 2981526..2982941 1 NC_014150.1 KEGG: bhy:BHWA1_00795 fibronectin type III domain containing protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; fibronectin type III 2982941 9143641 Bmur_2633 Brachyspira murdochii DSM 12563 fibronectin type III YP_003634901.1 2981526 D 526224 CDS YP_003634902.1 296127650 9143642 2982961..2983824 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00796 TPR domain-containing protein; hypothetical protein 2983824 9143642 Bmur_2634 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634902.1 2982961 D 526224 CDS YP_003634903.1 296127651 9143643 2984145..2985971 1 NC_014150.1 KEGG: bhy:BHWA1_00052 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2985971 9143643 Bmur_2635 Brachyspira murdochii DSM 12563 methyl-accepting chemotaxis sensory transducer YP_003634903.1 2984145 D 526224 CDS YP_003634904.1 296127652 9143644 2986104..2986355 1 NC_014150.1 KEGG: bhy:BHWA1_00053 hypothetical protein; hypothetical protein 2986355 9143644 Bmur_2636 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634904.1 2986104 D 526224 CDS YP_003634905.1 296127653 9143645 2986394..2987818 1 NC_014150.1 KEGG: bhy:BHWA1_00054 thiamine biosynthesis protein; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB; biotin and thiamin synthesis associated protein 2987818 9143645 Bmur_2637 Brachyspira murdochii DSM 12563 biotin and thiamin synthesis associated protein YP_003634905.1 2986394 D 526224 CDS YP_003634906.1 296127654 9143646 2988008..2989192 1 NC_014150.1 KEGG: bhy:BHWA1_00055 GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; small GTP-binding protein 2989192 9143646 Bmur_2638 Brachyspira murdochii DSM 12563 small GTP-binding protein YP_003634906.1 2988008 D 526224 CDS YP_003634907.1 296127655 9143647 2989733..2990857 1 NC_014150.1 KEGG: bhy:BHWA1_00056 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2990857 9143647 Bmur_2639 Brachyspira murdochii DSM 12563 radical SAM protein YP_003634907.1 2989733 D 526224 CDS YP_003634908.1 296127656 9143648 2990925..2992679 1 NC_014150.1 KEGG: bhy:BHWA1_00057 cation transport protein TrkH; PFAM: cation transporter; H(+)-transporting two-sector ATPase 2992679 9143648 Bmur_2640 Brachyspira murdochii DSM 12563 H(+)-transporting two-sector ATPase YP_003634908.1 2990925 D 526224 CDS YP_003634909.1 296127657 9143649 2992686..2993870 1 NC_014150.1 KEGG: bhy:BHWA1_00058 MobA-related protein; MobA-related protein 2993870 9143649 Bmur_2641 Brachyspira murdochii DSM 12563 MobA-related protein YP_003634909.1 2992686 D 526224 CDS YP_003634910.1 296127658 9143650 2994187..2995377 1 NC_014150.1 KEGG: hhe:HH1512 hypothetical protein; hypothetical protein 2995377 9143650 Bmur_2642 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634910.1 2994187 D 526224 CDS YP_003634911.1 296127659 9143651 2995433..2996548 1 NC_014150.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hhe:HH1513 hypothetical protein; acyl-CoA dehydrogenase 2996548 9143651 Bmur_2643 Brachyspira murdochii DSM 12563 acyl-CoA dehydrogenase YP_003634911.1 2995433 D 526224 CDS YP_003634912.1 296127660 9143652 2996590..2997444 1 NC_014150.1 KEGG: hhe:HH1514 hypothetical protein; hypothetical protein 2997444 9143652 Bmur_2644 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634912.1 2996590 D 526224 CDS YP_003634913.1 296127661 9143653 complement(2997594..2998976) 1 NC_014150.1 KEGG: bhy:BHWA1_00059 xanthine/uracil permease; TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; uracil-xanthine permease 2998976 9143653 Bmur_2645 Brachyspira murdochii DSM 12563 uracil-xanthine permease YP_003634913.1 2997594 R 526224 CDS YP_003634914.1 296127662 9143654 complement(2999020..2999871) 1 NC_014150.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bhy:BHWA1_00060 aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM S; molybdopterin dehydrogenase FAD-binding protein 2999871 9143654 Bmur_2646 Brachyspira murdochii DSM 12563 molybdopterin dehydrogenase FAD-binding protein YP_003634914.1 2999020 R 526224 CDS YP_003634915.1 296127663 9143655 complement(2999862..3000350) 1 NC_014150.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bhy:BHWA1_00061 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS S; (2Fe-2S)-binding protein 3000350 9143655 Bmur_2647 Brachyspira murdochii DSM 12563 (2Fe-2S)-binding protein YP_003634915.1 2999862 R 526224 CDS YP_003634916.1 296127664 9143656 complement(3000350..3002485) 1 NC_014150.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bhy:BHWA1_00062 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL S; aldehyde oxidase 3002485 9143656 Bmur_2648 Brachyspira murdochii DSM 12563 aldehyde oxidase YP_003634916.1 3000350 R 526224 CDS YP_003634917.1 296127665 9143658 complement(3003910..3004851) 1 NC_014150.1 TIGRFAM: carbamate kinase; KEGG: bhy:BHWA1_00063 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; carbamate kinase 3004851 9143658 Bmur_2650 Brachyspira murdochii DSM 12563 carbamate kinase YP_003634917.1 3003910 R 526224 CDS YP_003634918.1 296127666 9143659 complement(3004985..3006178) 1 NC_014150.1 KEGG: bhy:BHWA1_00064 ornithine carbamoyltransferase; TIGRFAM: carbamoyltransferase YgeW; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; carbamoyltransferase YgeW 3006178 9143659 Bmur_2651 Brachyspira murdochii DSM 12563 carbamoyltransferase YgeW YP_003634918.1 3004985 R 526224 CDS YP_003634919.1 296127667 9143660 complement(3006227..3007558) 1 NC_014150.1 KEGG: bhy:BHWA1_00065 acetylornithine deacetylase ArgE; TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase dimerisation domain protein; peptidase M20; M20/DapE family protein YgeY 3007558 9143660 Bmur_2652 Brachyspira murdochii DSM 12563 M20/DapE family protein YgeY YP_003634919.1 3006227 R 526224 CDS YP_003634920.1 296127668 9143661 complement(3007634..3008827) 1 NC_014150.1 KEGG: bhy:BHWA1_00066 diaminopropionate ammonia- lyase; TIGRFAM: diaminopropionate ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; diaminopropionate ammonia-lyase 3008827 9143661 Bmur_2653 Brachyspira murdochii DSM 12563 diaminopropionate ammonia-lyase YP_003634920.1 3007634 R 526224 CDS YP_003634921.1 296127669 9143662 complement(3008820..3009473) 1 NC_014150.1 PFAM: YheO domain protein; KEGG: bhy:BHWA1_00067 hypothetical protein containing PAS domain; hypothetical protein 3009473 9143662 Bmur_2654 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634921.1 3008820 R 526224 CDS YP_003634922.1 296127670 9143663 3009675..3011006 1 NC_014150.1 KEGG: bhy:BHWA1_00068 chlorohydrolase/aminohydrolase; TIGRFAM: selenium metabolism protein SsnA; PFAM: amidohydrolase; selenium metabolism protein SsnA 3011006 9143663 Bmur_2655 Brachyspira murdochii DSM 12563 selenium metabolism protein SsnA YP_003634922.1 3009675 D 526224 CDS YP_003634923.1 296127671 9143664 3011134..3014109 1 NC_014150.1 KEGG: bhy:BHWA1_00069 oxidoreductase, Fe-S subunit; TIGRFAM: selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; selenate reductase YgfK 3014109 9143664 Bmur_2656 Brachyspira murdochii DSM 12563 selenate reductase YgfK YP_003634923.1 3011134 D 526224 CDS YP_003634924.1 296127672 9143665 3014215..3016785 1 NC_014150.1 KEGG: bhy:BHWA1_00070 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL S; TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; selenium-dependent molybdenum hydroxylase 1 3016785 9143665 Bmur_2657 Brachyspira murdochii DSM 12563 selenium-dependent molybdenum hydroxylase 1 YP_003634924.1 3014215 D 526224 CDS YP_003634925.1 296127673 9143666 3016797..3017624 1 NC_014150.1 TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; KEGG: bhy:BHWA1_00071 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component; selenium-dependent molybdenum hydroxylase system protein, YqeB family 3017624 9143666 Bmur_2658 Brachyspira murdochii DSM 12563 selenium-dependent molybdenum hydroxylase system protein, YqeB family YP_003634925.1 3016797 D 526224 CDS YP_003634926.1 296127674 9143667 complement(3018053..3018601) 1 NC_014150.1 KEGG: bhy:BHWA1_02636 hypothetical protein; hypothetical protein 3018601 9143667 Bmur_2659 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634926.1 3018053 R 526224 CDS YP_003634927.1 296127675 9143668 complement(3018607..3020148) 1 NC_014150.1 KEGG: bhy:BHWA1_02637 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; carbohydrate kinase 3020148 9143668 Bmur_2660 Brachyspira murdochii DSM 12563 carbohydrate kinase YP_003634927.1 3018607 R 526224 CDS YP_003634928.1 296127676 9143669 complement(3020145..3022004) 1 NC_014150.1 KEGG: bhy:BHWA1_02638 hypothetical protein; hypothetical protein 3022004 9143669 Bmur_2661 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634928.1 3020145 R 526224 CDS YP_003634929.1 296127677 9143670 complement(3022114..3022431) 1 NC_014150.1 KEGG: bhy:BHWA1_02639 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin 3022431 9143670 Bmur_2662 Brachyspira murdochii DSM 12563 thioredoxin YP_003634929.1 3022114 R 526224 CDS YP_003634930.1 296127678 9143671 3022611..3023027 1 NC_014150.1 KEGG: bhy:BHWA1_02640 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 3023027 9143671 Bmur_2663 Brachyspira murdochii DSM 12563 MarR family transcriptional regulator YP_003634930.1 3022611 D 526224 CDS YP_003634931.1 296127679 9143672 3023030..3023692 1 NC_014150.1 PFAM: protein of unknown function DUF161; KEGG: bhy:BHWA1_02641 hypothetical protein; hypothetical protein 3023692 9143672 Bmur_2664 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634931.1 3023030 D 526224 CDS YP_003634932.1 296127680 9143673 complement(3023905..3025158) 1 NC_014150.1 KEGG: bhy:BHWA1_02642 3-oxoacyl-ACP (acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; 3-oxoacyl-ACP synthase 3025158 9143673 Bmur_2665 Brachyspira murdochii DSM 12563 3-oxoacyl-ACP synthase YP_003634932.1 3023905 R 526224 CDS YP_003634933.1 296127681 9143674 complement(3025251..3025487) 1 NC_014150.1 KEGG: bhy:BHWA1_02643 acyl carrier protein (ACP) contains: beta-hemolysin; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; acyl carrier protein 3025487 9143674 Bmur_2666 Brachyspira murdochii DSM 12563 acyl carrier protein YP_003634933.1 3025251 R 526224 CDS YP_003634934.1 296127682 9143675 complement(3025568..3026317) 1 NC_014150.1 KEGG: bhy:BHWA1_02644 3-oxoacyl-ACP (acyl carrier protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3026317 9143675 Bmur_2667 Brachyspira murdochii DSM 12563 3-oxoacyl-ACP reductase YP_003634934.1 3025568 R 526224 CDS YP_003634935.1 296127683 9143676 complement(3026564..3028000) 1 NC_014150.1 KEGG: bhy:BHWA1_02645 phosphomannomutase/phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 3028000 9143676 Bmur_2668 Brachyspira murdochii DSM 12563 phosphoglucosamine mutase YP_003634935.1 3026564 R 526224 CDS YP_003634936.1 296127684 9143677 complement(3028134..3029318) 1 NC_014150.1 PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_02646 cAMP-binding protein; Crp/Fnr family transcriptional regulator 3029318 9143677 Bmur_2669 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003634936.1 3028134 R 526224 CDS YP_003634937.1 296127685 9143678 complement(3029390..3029968) 1 NC_014150.1 KEGG: bhy:BHWA1_02647 3-methyl-adenine D glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 3029968 9143678 Bmur_2670 Brachyspira murdochii DSM 12563 DNA-3-methyladenine glycosylase I YP_003634937.1 3029390 R 526224 CDS YP_003634938.1 296127686 9143679 complement(3029995..3030489) 1 NC_014150.1 KEGG: bhy:BHWA1_02648 hypothetical protein; hypothetical protein 3030489 9143679 Bmur_2671 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634938.1 3029995 R 526224 CDS YP_003634939.1 296127687 9143680 complement(3030506..3031393) 1 NC_014150.1 KEGG: bhy:BHWA1_02649 RNA polymerase sigma subunit RpoD; RNA polymerase sigma subunit RpoD 3031393 9143680 Bmur_2672 Brachyspira murdochii DSM 12563 RNA polymerase sigma subunit RpoD YP_003634939.1 3030506 R 526224 CDS YP_003634940.1 296127688 9143681 complement(3031386..3031841) 1 NC_014150.1 PFAM: protein of unknown function DUF721; KEGG: bhy:BHWA1_02650 hypothetical protein; hypothetical protein 3031841 9143681 Bmur_2673 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634940.1 3031386 R 526224 CDS YP_003634941.1 296127689 9143682 complement(3031892..3032842) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_02651 TPR domain protein; hypothetical protein 3032842 9143682 Bmur_2674 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634941.1 3031892 R 526224 CDS YP_003634942.1 296127690 9143683 complement(3032832..3033674) 1 NC_014150.1 KEGG: bhy:BHWA1_02653 hypothetical protein; hypothetical protein 3033674 9143683 Bmur_2675 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634942.1 3032832 R 526224 CDS YP_003634943.1 296127691 9143685 3035387..3036568 1 NC_014150.1 TIGRFAM: galactokinase; KEGG: bhy:BHWA1_02655 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase domain protein; GHMP kinase; cyclic nucleotide-binding protein 3036568 9143685 Bmur_2677 Brachyspira murdochii DSM 12563 cyclic nucleotide-binding protein YP_003634943.1 3035387 D 526224 CDS YP_003634944.1 296127692 9143686 join(3036708..3036779,3036781..3037812) 1 NC_014150.1 manually curated; hypothetical protein 3037812 9143686 Bmur_2678 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634944.1 3036708 D 526224 CDS YP_003634945.1 296127693 9143687 3038014..3038586 1 NC_014150.1 KEGG: bhy:BHWA1_02657 hypothetical protein; hypothetical protein 3038586 9143687 Bmur_2679 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634945.1 3038014 D 526224 CDS YP_003634946.1 296127694 9143688 3038732..3039304 1 NC_014150.1 KEGG: bhy:BHWA1_02658 hypothetical protein; hypothetical protein 3039304 9143688 Bmur_2680 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634946.1 3038732 D 526224 CDS YP_003634947.1 296127695 9143689 complement(3039310..3040590) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_00209 ankyrin repeat-containing protein; ankyrin 3040590 9143689 Bmur_2681 Brachyspira murdochii DSM 12563 ankyrin YP_003634947.1 3039310 R 526224 CDS YP_003634948.1 296127696 9143690 3040768..3041340 1 NC_014150.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bhy:BHWA1_00210 HDIG domain protein; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 3041340 9143690 Bmur_2682 Brachyspira murdochii DSM 12563 metal dependent phosphohydrolase YP_003634948.1 3040768 D 526224 CDS YP_003634949.1 296127697 9143691 3041358..3041999 1 NC_014150.1 KEGG: bhy:BHWA1_00211 bifunctional pyrazinamidase/nicotinamidase; bifunctional pyrazinamidase/nicotinamidase 3041999 9143691 Bmur_2683 Brachyspira murdochii DSM 12563 bifunctional pyrazinamidase/nicotinamidase YP_003634949.1 3041358 D 526224 CDS YP_003634950.1 296127698 9143692 3041996..3042529 1 NC_014150.1 KEGG: bhy:BHWA1_00212 methylated DNA-protein cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3042529 9143692 Bmur_2684 Brachyspira murdochii DSM 12563 methylated-DNA--protein-cysteine methyltransferase YP_003634950.1 3041996 D 526224 CDS YP_003634951.1 296127699 9143693 3042570..3043124 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00213 ribosomal-protein-S5-alanine acetyltransferase; N-acetyltransferase GCN5 3043124 9143693 Bmur_2685 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003634951.1 3042570 D 526224 CDS YP_003634952.1 296127700 9143694 3043706..3044707 1 NC_014150.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bhy:BHWA1_01503 quinone reductase; molecular chaperone GroES 3044707 9143694 Bmur_2686 Brachyspira murdochii DSM 12563 molecular chaperone GroES YP_003634952.1 3043706 D 526224 CDS YP_003634953.1 296127701 9143695 3044846..3045997 1 NC_014150.1 KEGG: bhy:BHWA1_00569 sporulation stage II protein D, amidase enhancer LytB; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; SpoIID/LytB domain-containing protein 3045997 9143695 Bmur_2687 Brachyspira murdochii DSM 12563 SpoIID/LytB domain-containing protein YP_003634953.1 3044846 D 526224 CDS YP_003634954.1 296127702 9143696 complement(3046082..3047452) 1 NC_014150.1 PFAM: aldehyde Dehydrogenase; KEGG: bhy:BHWA1_00568 aldehyde dehydrogenase YwdH; aldehyde dehydrogenase 3047452 9143696 Bmur_2688 Brachyspira murdochii DSM 12563 aldehyde dehydrogenase YP_003634954.1 3046082 R 526224 CDS YP_003634955.1 296127703 9143697 3047633..3049891 1 NC_014150.1 PFAM: lytic transglycosylase catalytic; KEGG: bhy:BHWA1_00566 lytic transglycosylase catalytic; lytic transglycosylase 3049891 9143697 Bmur_2689 Brachyspira murdochii DSM 12563 lytic transglycosylase YP_003634955.1 3047633 D 526224 CDS YP_003634956.1 296127704 9143698 complement(3050360..3050785) 1 NC_014150.1 KEGG: bhy:BHWA1_00565 periplasmic protein; hypothetical protein 3050785 9143698 Bmur_2690 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634956.1 3050360 R 526224 CDS YP_003634957.1 296127705 9143699 complement(3051073..3053643) 1 NC_014150.1 KEGG: bhy:BHWA1_00564 hypothetical protein; hypothetical protein 3053643 9143699 Bmur_2691 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634957.1 3051073 R 526224 CDS YP_003634958.1 296127706 9143700 complement(3053859..3054440) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 3054440 9143700 Bmur_2692 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634958.1 3053859 R 526224 CDS YP_003634959.1 296127707 9143701 3054682..3055827 1 NC_014150.1 PFAM: aminotransferase class V; KEGG: bhy:BHWA1_00563 serine-pyruvate/aspartate aminotransferase related enzyme; class V aminotransferase 3055827 9143701 Bmur_2693 Brachyspira murdochii DSM 12563 class V aminotransferase YP_003634959.1 3054682 D 526224 CDS YP_003634960.1 296127708 9143702 3056010..3057614 1 NC_014150.1 KEGG: bhy:BHWA1_00562 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; amino acid-binding ACT domain protein; D- isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-3-phosphoglycerate dehydrogenase 3057614 9143702 Bmur_2694 Brachyspira murdochii DSM 12563 D-3-phosphoglycerate dehydrogenase YP_003634960.1 3056010 D 526224 CDS YP_003634961.1 296127709 9143703 3057633..3058253 1 NC_014150.1 TIGRFAM: phosphoserine phosphatase SerB; HAD- superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bhy:BHWA1_00561 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3058253 9143703 Bmur_2695 Brachyspira murdochii DSM 12563 phosphoserine phosphatase SerB YP_003634961.1 3057633 D 526224 CDS YP_003634962.1 296127710 9143704 complement(3058444..3059787) 1 NC_014150.1 KEGG: pdi:BDI_1076 citrate synthase; PFAM: citrate synthase; citrate (Si)-synthase 3059787 9143704 Bmur_2696 Brachyspira murdochii DSM 12563 citrate (Si)-synthase YP_003634962.1 3058444 R 526224 CDS YP_003634963.1 296127711 9143705 complement(3059872..3061131) 1 NC_014150.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: pdi:BDI_1075 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase 3061131 9143705 Bmur_2697 Brachyspira murdochii DSM 12563 isocitrate dehydrogenase YP_003634963.1 3059872 R 526224 CDS YP_003634964.1 296127712 9143706 complement(3061227..3062102) 1 NC_014150.1 KEGG: bhy:BHWA1_01131 hypothetical protein; hypothetical protein 3062102 9143706 Bmur_2698 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634964.1 3061227 R 526224 CDS YP_003634965.1 296127713 9143707 complement(3062323..3063405) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_01125 ankyrin repeat-containing protein; ankyrin 3063405 9143707 Bmur_2699 Brachyspira murdochii DSM 12563 ankyrin YP_003634965.1 3062323 R 526224 CDS YP_003634966.1 296127714 9143708 complement(3063771..3064853) 1 NC_014150.1 KEGG: bhy:BHWA1_01126 hypothetical protein; hypothetical protein 3064853 9143708 Bmur_2700 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634966.1 3063771 R 526224 CDS YP_003634967.1 296127715 9143709 complement(3065010..3066167) 1 NC_014150.1 PFAM: ankyrin; KEGG: bhy:BHWA1_01127 ankyrin repeat-containing protein; ankyrin 3066167 9143709 Bmur_2701 Brachyspira murdochii DSM 12563 ankyrin YP_003634967.1 3065010 R 526224 CDS YP_003634968.1 296127716 9143710 complement(3066313..3068568) 1 NC_014150.1 KEGG: pdi:BDI_1074 aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; aconitate hydratase 3068568 9143710 Bmur_2702 Brachyspira murdochii DSM 12563 aconitate hydratase YP_003634968.1 3066313 R 526224 CDS YP_003634969.1 296127717 9143711 3068743..3069240 1 NC_014150.1 KEGG: bhy:BHWA1_00559 hypothetical protein; hypothetical protein 3069240 9143711 Bmur_2703 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634969.1 3068743 D 526224 CDS YP_003634970.1 296127718 9143712 complement(3069321..3071636) 1 NC_014150.1 TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; KEGG: bhy:BHWA1_00403 ribonucleotide-diphosphate reductase alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP- cone domain protein; ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha 3071636 9143712 Bmur_2704 Brachyspira murdochii DSM 12563 ribonucleoside-diphosphate reductase subunit alpha YP_003634970.1 3069321 R 526224 CDS YP_003634971.1 296127719 9143713 complement(3071688..3072761) 1 NC_014150.1 PFAM: ribonucleotide reductase; KEGG: bhy:BHWA1_00404 ribonucleoside-diphosphate reductase, beta subunit; ribonucleotide reductase 3072761 9143713 Bmur_2705 Brachyspira murdochii DSM 12563 ribonucleotide reductase YP_003634971.1 3071688 R 526224 CDS YP_003634972.1 296127720 9143714 3073318..3074757 1 NC_014150.1 TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: bhy:BHWA1_00520 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20; aminoacyl-histidine dipeptidase 3074757 9143714 Bmur_2706 Brachyspira murdochii DSM 12563 aminoacyl-histidine dipeptidase YP_003634972.1 3073318 D 526224 CDS YP_003634973.1 296127721 9143715 3074834..3076768 1 NC_014150.1 KEGG: cbl:CLK_1671 OPT family oligopeptide transporter; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; oligopeptide transporter 3076768 9143715 Bmur_2707 Brachyspira murdochii DSM 12563 oligopeptide transporter YP_003634973.1 3074834 D 526224 CDS YP_003634974.1 296127722 9143716 3076906..3077319 1 NC_014150.1 KEGG: cby:CLM_2436 hypothetical protein; hypothetical protein 3077319 9143716 Bmur_2708 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634974.1 3076906 D 526224 CDS YP_003634975.1 296127723 9143717 3077388..3078311 1 NC_014150.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bhy:BHWA1_00519 cysteine synthase A; pyridoxal-5'-phosphate-dependent protein subunit beta 3078311 9143717 Bmur_2709 Brachyspira murdochii DSM 12563 pyridoxal-5'-phosphate-dependent protein subunit beta YP_003634975.1 3077388 D 526224 CDS YP_003634976.1 296127724 9143718 3078322..3079044 1 NC_014150.1 KEGG: bhy:BHWA1_00518 serine acetyltransferase-like protein; serine O-acetyltransferase 3079044 9143718 Bmur_2710 Brachyspira murdochii DSM 12563 serine O-acetyltransferase YP_003634976.1 3078322 D 526224 CDS YP_003634977.1 296127725 9143719 complement(3079104..3079775) 1 NC_014150.1 KEGG: bhy:BHWA1_00619 hypothetical protein; hypothetical protein 3079775 9143719 Bmur_2711 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634977.1 3079104 R 526224 CDS YP_003634978.1 296127726 9143720 3079873..3081402 1 NC_014150.1 KEGG: aau:AAur_0636 BNR/Asp-box repeat-containing protein; hypothetical protein 3081402 9143720 Bmur_2712 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634978.1 3079873 D 526224 CDS YP_003634979.1 296127727 9143721 3081561..3082583 1 NC_014150.1 PFAM: PfkB domain protein; KEGG: bhy:BHWA1_00517 2-keto-3-deoxygluconate kinase; PfkB domain-containing protein 3082583 9143721 Bmur_2713 Brachyspira murdochii DSM 12563 PfkB domain-containing protein YP_003634979.1 3081561 D 526224 CDS YP_003634980.1 296127728 9143722 3082657..3083613 1 NC_014150.1 PFAM: ROK family protein; KEGG: bhy:BHWA1_00514 transcriptional regulator/sugar kinase; ROK family protein 3083613 9143722 Bmur_2714 Brachyspira murdochii DSM 12563 ROK family protein YP_003634980.1 3082657 D 526224 CDS YP_003634981.1 296127729 9143723 3083919..3084407 1 NC_014150.1 KEGG: glo:Glov_1958 hypothetical protein; hypothetical protein 3084407 9143723 Bmur_2715 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634981.1 3083919 D 526224 CDS YP_003634982.1 296127730 9143724 3084397..3084948 1 NC_014150.1 KEGG: glo:Glov_1958 hypothetical protein; hypothetical protein 3084948 9143724 Bmur_2716 Brachyspira murdochii DSM 12563 hypothetical protein YP_003634982.1 3084397 D 526224 CDS YP_003634983.1 296127731 9143725 complement(3085013..3087592) 1 NC_014150.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase- like; KEGG: bhy:BHWA1_00583 ATP-dependent Clp protease, ATP-binding subunit ClpB; SMART: AAA ATPase; ATP-dependent chaperone ClpB 3087592 9143725 Bmur_2717 Brachyspira murdochii DSM 12563 ATP-dependent chaperone ClpB YP_003634983.1 3085013 R 526224 CDS YP_003634984.1 296127732 9143726 3088319..3089047 1 NC_014150.1 PFAM: peptidase C26; KEGG: tde:TDE0444 glutamine amidotransferase class I; peptidase C26 3089047 9143726 Bmur_2718 Brachyspira murdochii DSM 12563 peptidase C26 YP_003634984.1 3088319 D 526224 CDS YP_003634985.1 296127733 9143727 3089069..3090352 1 NC_014150.1 PFAM: amino acid permease-associated region; KEGG: tde:TDE0445 amino acid permease; amino acid permease 3090352 9143727 Bmur_2719 Brachyspira murdochii DSM 12563 amino acid permease YP_003634985.1 3089069 D 526224 CDS YP_003634986.1 296127734 9143728 3090531..3090926 1 NC_014150.1 KEGG: cdl:CDR20291_2244 glycine reductase complex component; glycine reductase complex component 3090926 9143728 Bmur_2720 Brachyspira murdochii DSM 12563 glycine reductase complex component YP_003634986.1 3090531 D 526224 CDS YP_003634987.1 296127735 9143729 3090950..3091909 1 NC_014150.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cdl:CDR20291_2243 thioredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3091909 9143729 Bmur_2721 Brachyspira murdochii DSM 12563 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003634987.1 3090950 D 526224 CDS YP_003634988.1 296127736 9143730 3092248..3093534 1 NC_014150.1 PFAM: glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: aoe:Clos_0956 sarcosine reductase; glycine/sarcosine/betaine reductase complex protein B subunits alpha and beta 3093534 9143730 Bmur_2722 Brachyspira murdochii DSM 12563 glycine/sarcosine/betaine reductase complex protein B subunits alpha and beta YP_003634988.1 3092248 D 526224 CDS YP_003634989.1 296127737 9143731 3093590..3093724 1 NC_014150.1 PFAM: glycine reductase complex selenoprotein A; KEGG: cdl:CDR20291_2240 glycine/sarcosine/betaine reductase complex component A; glycine reductase complex selenoprotein A 3093724 9143731 Bmur_2723 Brachyspira murdochii DSM 12563 glycine reductase complex selenoprotein A YP_003634989.1 3093590 D 526224 CDS YP_003634990.1 296127738 9143732 3093740..3094063 1 NC_014150.1 PFAM: glycine reductase complex selenoprotein A; KEGG: aoe:Clos_0957 glycine/sarcosine/betaine reductase complex protein A; glycine reductase complex selenoprotein A 3094063 9143732 Bmur_2724 Brachyspira murdochii DSM 12563 glycine reductase complex selenoprotein A YP_003634990.1 3093740 D 526224 CDS YP_003634991.1 296127739 9143733 3094216..3095253 1 NC_014150.1 KEGG: aoe:Clos_0958 selenoprotein B; TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase; PFAM: Selenoprotein B glycine/betaine/sarcosine/D- proline reductase; selenoprotein B, glycine/betaine/sarcosine/D- proline reductase 3095253 9143733 Bmur_2725 Brachyspira murdochii DSM 12563 selenoprotein B, glycine/betaine/sarcosine/D- proline reductase YP_003634991.1 3094216 D 526224 CDS YP_003634992.1 296127740 9143734 3095281..3095514 1 NC_014150.1 TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase; KEGG: shi:Shel_25230 glycine reductase, selenoprotein B; selenoprotein B, glycine/betaine/sarcosine/D- proline reductase 3095514 9143734 Bmur_2726 Brachyspira murdochii DSM 12563 selenoprotein B, glycine/betaine/sarcosine/D- proline reductase YP_003634992.1 3095281 D 526224 CDS YP_003634993.1 296127741 9143735 3095670..3097256 1 NC_014150.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: aoe:Clos_0959 sarcosine reductase; 3-oxoacyl-ACP synthase 3097256 9143735 Bmur_2727 Brachyspira murdochii DSM 12563 3-oxoacyl-ACP synthase YP_003634993.1 3095670 D 526224 CDS YP_003634994.1 296127742 9143736 3097268..3098443 1 NC_014150.1 PFAM: fatty acid synthesis plsX protein; KEGG: aoe:Clos_0960 glycine reductase; fatty acid/phospholipid synthesis protein PlsX 3098443 9143736 Bmur_2728 Brachyspira murdochii DSM 12563 fatty acid/phospholipid synthesis protein PlsX YP_003634994.1 3097268 D 526224 CDS YP_003634995.1 296127743 9143737 3098595..3099995 1 NC_014150.1 KEGG: bhy:BHWA1_00582 sodium:alanine symporter family protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 3099995 9143737 Bmur_2729 Brachyspira murdochii DSM 12563 amino acid carrier protein YP_003634995.1 3098595 D 526224 CDS YP_003634996.1 296127744 9143738 3100197..3101606 1 NC_014150.1 KEGG: bhy:BHWA1_00582 sodium:alanine symporter family protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 3101606 9143738 Bmur_2730 Brachyspira murdochii DSM 12563 amino acid carrier protein YP_003634996.1 3100197 D 526224 CDS YP_003634997.1 296127745 9143739 complement(3101675..3102037) 1 NC_014150.1 KEGG: bhy:BHWA1_00581 methionine sulfoxide reductase B; PFAM: methionine sulfoxide reductase B; peptide-methionine (R)-S-oxide reductase 3102037 9143739 Bmur_2731 Brachyspira murdochii DSM 12563 peptide-methionine (R)-S-oxide reductase YP_003634997.1 3101675 R 526224 CDS YP_003634998.1 296127746 9143740 complement(3102078..3102650) 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00580 sortase related acyltransferase; N-acetyltransferase GCN5 3102650 9143740 Bmur_2732 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003634998.1 3102078 R 526224 CDS YP_003634999.1 296127747 9143741 3103001..3103816 1 NC_014150.1 KEGG: bhy:BHWA1_00513 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 3103816 9143741 Bmur_2733 Brachyspira murdochii DSM 12563 30S ribosomal protein S2 YP_003634999.1 3103001 D 526224 CDS YP_003635000.1 296127748 9143742 3103861..3104715 1 NC_014150.1 KEGG: bhy:BHWA1_00512 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts 3104715 9143742 Bmur_2734 Brachyspira murdochii DSM 12563 translation elongation factor Ts YP_003635000.1 3103861 D 526224 CDS YP_003635001.1 296127749 9143743 complement(3104882..3106243) 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00511 TPR domain-containing protein; hypothetical protein 3106243 9143743 Bmur_2735 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635001.1 3104882 R 526224 CDS YP_003635002.1 296127750 9143744 complement(3106258..3107298) 1 NC_014150.1 KEGG: bhy:BHWA1_00510 hypothetical protein; hypothetical protein 3107298 9143744 Bmur_2736 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635002.1 3106258 R 526224 CDS YP_003635003.1 296127751 9143745 complement(3107308..3109479) 1 NC_014150.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: bhy:BHWA1_00509 L-lactate dehydrogenase; ATPase 3109479 9143745 Bmur_2737 Brachyspira murdochii DSM 12563 ATPase YP_003635003.1 3107308 R 526224 CDS YP_003635004.1 296127752 9143746 3109703..3110053 1 NC_014150.1 KEGG: bhy:BHWA1_00363 tRNA bind CsaA, tR-binding- domain-containing CsaA-like proteins; TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; export-related chaperone CsaA 3110053 9143746 Bmur_2738 Brachyspira murdochii DSM 12563 export-related chaperone CsaA YP_003635004.1 3109703 D 526224 CDS YP_003635005.1 296127753 9143747 complement(3110164..3111858) 1 NC_014150.1 KEGG: bhy:BHWA1_00750 DNA or RNA helicase of superfamily II; PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; helicase domain-containing protein 3111858 9143747 Bmur_2739 Brachyspira murdochii DSM 12563 helicase domain-containing protein YP_003635005.1 3110164 R 526224 CDS YP_003635006.1 296127754 9143748 complement(3111930..3112622) 1 NC_014150.1 PFAM: Tetratricopeptide TPR_3; KEGG: bhy:BHWA1_00749 TPR domain-containing protein; Tetratricopeptide TPR_3 3112622 9143748 Bmur_2740 Brachyspira murdochii DSM 12563 Tetratricopeptide TPR_3 YP_003635006.1 3111930 R 526224 CDS YP_003635007.1 296127755 9143749 3112798..3113832 1 NC_014150.1 KEGG: bhy:BHWA1_00748 hypothetical protein; hypothetical protein 3113832 9143749 Bmur_2741 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635007.1 3112798 D 526224 CDS YP_003635008.1 296127756 9143750 3113920..3114915 1 NC_014150.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bhy:BHWA1_00747 lactate dehydrogenase-like dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 3114915 9143750 Bmur_2742 Brachyspira murdochii DSM 12563 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_003635008.1 3113920 D 526224 CDS YP_003635009.1 296127757 9143751 3115059..3116687 1 NC_014150.1 PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_00746 extracellular solute-binding protein, family 5; ABC transporter substrate-binding protein 3116687 9143751 Bmur_2743 Brachyspira murdochii DSM 12563 ABC transporter substrate-binding protein YP_003635009.1 3115059 D 526224 CDS YP_003635010.1 296127758 9143752 3117269..3118615 1 NC_014150.1 KEGG: bhy:BHWA1_00147 lytic transglycosylase, catalytic; PFAM: lytic transglycosylase catalytic; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; lytic transglycosylase 3118615 9143752 Bmur_2744 Brachyspira murdochii DSM 12563 lytic transglycosylase YP_003635010.1 3117269 D 526224 CDS YP_003635011.1 296127759 9143753 complement(3118839..3120509) 1 NC_014150.1 KEGG: bhy:BHWA1_00143 Na+/phosphate symporter; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; Na/Pi-cotransporter II-like protein 3120509 9143753 Bmur_2745 Brachyspira murdochii DSM 12563 Na/Pi-cotransporter II-like protein YP_003635011.1 3118839 R 526224 CDS YP_003635012.1 296127760 9143754 complement(3120638..3120841) 1 NC_014150.1 PFAM: TM2 domain containing protein; KEGG: bhy:BHWA1_00609 TM2 domain family protein; TM2 domain-containing protein 3120841 9143754 Bmur_2746 Brachyspira murdochii DSM 12563 TM2 domain-containing protein YP_003635012.1 3120638 R 526224 CDS YP_003635013.1 296127761 9143755 3121092..3122696 1 NC_014150.1 KEGG: bhy:BHWA1_00364 TPR domain-containing protein; hypothetical protein 3122696 9143755 Bmur_2747 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635013.1 3121092 D 526224 CDS YP_003635014.1 296127762 9143756 3122874..3124787 1 NC_014150.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: bhy:BHWA1_00601 D gyrase B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; ATP- binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B 3124787 9143756 Bmur_2748 Brachyspira murdochii DSM 12563 DNA gyrase subunit B YP_003635014.1 3122874 D 526224 CDS YP_003635015.1 296127763 9143757 3124885..3125847 1 NC_014150.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bhy:BHWA1_00602 thioredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3125847 9143757 Bmur_2749 Brachyspira murdochii DSM 12563 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003635015.1 3124885 D 526224 CDS YP_003635016.1 296127764 9143758 3125904..3126335 1 NC_014150.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_01369 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3126335 9143758 Bmur_2750 Brachyspira murdochii DSM 12563 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_003635016.1 3125904 D 526224 CDS YP_003635017.1 296127765 9143759 3126346..3126648 1 NC_014150.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; KEGG: bhy:BHWA1_00603 phosphotransferase enzyme II, B compnent SgaB; PTS system lactose/cellobiose-specific transporter subunit IIB 3126648 9143759 Bmur_2751 Brachyspira murdochii DSM 12563 PTS system lactose/cellobiose-specific transporter subunit IIB YP_003635017.1 3126346 D 526224 CDS YP_003635018.1 296127766 9143760 complement(3126734..3128575) 1 NC_014150.1 PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: bhy:BHWA1_00606 UshA, 5'-nucleotidase/2',3'- cyclic phosphodiesterase-like esterase; 5'-nucleotidase 3128575 9143760 Bmur_2752 Brachyspira murdochii DSM 12563 5'-nucleotidase YP_003635018.1 3126734 R 526224 CDS YP_003635019.1 296127767 9143761 complement(3128634..3128993) 1 NC_014150.1 KEGG: bhy:BHWA1_00607 hypothetical protein; hypothetical protein 3128993 9143761 Bmur_2753 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635019.1 3128634 R 526224 CDS YP_003635020.1 296127768 9143762 complement(3129021..3129320) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 3129320 9143762 Bmur_2754 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635020.1 3129021 R 526224 CDS YP_003635021.1 296127769 9143763 3129485..3131305 1 NC_014150.1 KEGG: bhy:BHWA1_00608 peptidase; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; oligoendopeptidase F 3131305 9143763 Bmur_2755 Brachyspira murdochii DSM 12563 oligoendopeptidase F YP_003635021.1 3129485 D 526224 CDS YP_003635022.1 296127770 9143764 3131432..3131635 1 NC_014150.1 PFAM: TM2 domain containing protein; KEGG: bhy:BHWA1_00609 TM2 domain family protein; TM2 domain-containing protein 3131635 9143764 Bmur_2756 Brachyspira murdochii DSM 12563 TM2 domain-containing protein YP_003635022.1 3131432 D 526224 CDS YP_003635023.1 296127771 9143765 complement(3131739..3132554) 1 NC_014150.1 PFAM: phosphomethylpyrimidine kinase type-1; KEGG: bhy:BHWA1_00227 pyridoxamine kinase; phosphomethylpyrimidine kinase type-1 3132554 9143765 Bmur_2757 Brachyspira murdochii DSM 12563 phosphomethylpyrimidine kinase type-1 YP_003635023.1 3131739 R 526224 CDS YP_003635024.1 296127772 9143766 complement(3132565..3132789) 1 NC_014150.1 KEGG: bhy:BHWA1_00228 hypothetical protein; hypothetical protein 3132789 9143766 Bmur_2758 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635024.1 3132565 R 526224 CDS YP_003635025.1 296127773 9143767 complement(3132929..3133981) 1 NC_014150.1 KEGG: bhy:BHWA1_00230 hypothetical protein; hypothetical protein 3133981 9143767 Bmur_2759 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635025.1 3132929 R 526224 CDS YP_003635026.1 296127774 9143768 3134441..3137077 1 NC_014150.1 TIGRFAM: calcium-translocating P-type ATPase, PMCA- type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bhy:BHWA1_00231 cation transport ATPase; SMART: cation transporting ATPase domain protein; calcium-translocating P-type ATPase 3137077 9143768 Bmur_2760 Brachyspira murdochii DSM 12563 calcium-translocating P-type ATPase YP_003635026.1 3134441 D 526224 CDS YP_003635027.1 296127775 9143769 3137278..3138684 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00232 TPR domain-containing protein; hypothetical protein 3138684 9143769 Bmur_2761 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635027.1 3137278 D 526224 CDS YP_003635028.1 296127776 9143770 3138806..3139387 1 NC_014150.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bhy:BHWA1_00233 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 3139387 9143770 Bmur_2762 Brachyspira murdochii DSM 12563 ribosomal RNA methyltransferase RrmJ/FtsJ YP_003635028.1 3138806 D 526224 CDS YP_003635029.1 296127777 9143771 3139411..3139833 1 NC_014150.1 KEGG: bhy:BHWA1_00234 positive regulator of sigma E, RseC/MucC; sigma E positive regulator RseC/MucC 3139833 9143771 Bmur_2763 Brachyspira murdochii DSM 12563 sigma E positive regulator RseC/MucC YP_003635029.1 3139411 D 526224 CDS YP_003635030.1 296127778 9143772 3139852..3140301 1 NC_014150.1 KEGG: bhy:BHWA1_00235 hypothetical protein; hypothetical protein 3140301 9143772 Bmur_2764 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635030.1 3139852 D 526224 CDS YP_003635031.1 296127779 9143773 complement(3140309..3142609) 1 NC_014150.1 PFAM: glycoside hydrolase 57; KEGG: bhy:BHWA1_00236 glycoside hydrolase, family 57; glycoside hydrolase 57 3142609 9143773 Bmur_2765 Brachyspira murdochii DSM 12563 glycoside hydrolase 57 YP_003635031.1 3140309 R 526224 CDS YP_003635032.1 296127780 9143774 3142796..3144301 1 NC_014150.1 KEGG: bhy:BHWA1_00237 hypothetical protein; hypothetical protein 3144301 9143774 Bmur_2766 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635032.1 3142796 D 526224 CDS YP_003635033.1 296127781 9143775 3144321..3145043 1 NC_014150.1 TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bhy:BHWA1_00238 hemolysin protein; SMART: RNA-binding S4 domain protein; hemolysin A 3145043 9143775 Bmur_2767 Brachyspira murdochii DSM 12563 hemolysin A YP_003635033.1 3144321 D 526224 CDS YP_003635034.1 296127782 9143776 complement(3145040..3146245) 1 NC_014150.1 PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_00239 cAMP-binding protein; Crp/Fnr family transcriptional regulator 3146245 9143776 Bmur_2768 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003635034.1 3145040 R 526224 CDS YP_003635035.1 296127783 9143777 complement(3146296..3147456) 1 NC_014150.1 PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_00240 cAMP-binding protein; Crp/Fnr family transcriptional regulator 3147456 9143777 Bmur_2769 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003635035.1 3146296 R 526224 CDS YP_003635036.1 296127784 9143778 complement(3147618..3148772) 1 NC_014150.1 PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_00242 hypothetical protein; Crp/Fnr family transcriptional regulator 3148772 9143778 Bmur_2770 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003635036.1 3147618 R 526224 CDS YP_003635037.1 296127785 9143779 complement(3148870..3150024) 1 NC_014150.1 PFAM: cyclic nucleotide-binding; KEGG: bhy:BHWA1_00243 hypothetical protein; Crp/Fnr family transcriptional regulator 3150024 9143779 Bmur_2771 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003635037.1 3148870 R 526224 CDS YP_003635038.1 296127786 9143780 complement(3150087..3151244) 1 NC_014150.1 KEGG: bhy:BHWA1_00244 cAMP-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3151244 9143780 Bmur_2772 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003635038.1 3150087 R 526224 CDS YP_003635039.1 296127787 9143781 complement(3151384..3152571) 1 NC_014150.1 KEGG: bhy:BHWA1_00245 cAMP-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3152571 9143781 Bmur_2773 Brachyspira murdochii DSM 12563 Crp/Fnr family transcriptional regulator YP_003635039.1 3151384 R 526224 CDS YP_003635040.1 296127788 9143782 complement(3152652..3153335) 1 NC_014150.1 KEGG: bhy:BHWA1_00708 hypothetical protein; hypothetical protein 3153335 9143782 Bmur_2774 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635040.1 3152652 R 526224 CDS YP_003635041.1 296127789 9143783 complement(3153372..3155189) 1 NC_014150.1 PFAM: protein of unknown function DUF187; KEGG: bhy:BHWA1_00707 hypothetical protein; hypothetical protein 3155189 9143783 Bmur_2775 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635041.1 3153372 R 526224 CDS YP_003635042.1 296127790 9143784 complement(3155357..3155674) 1 NC_014150.1 PFAM: Thioredoxin domain; KEGG: cbi:CLJ_B1303 thioredoxin family protein; thioredoxin 3155674 9143784 Bmur_2776 Brachyspira murdochii DSM 12563 thioredoxin YP_003635042.1 3155357 R 526224 CDS YP_003635043.1 296127791 9143785 3155846..3156556 1 NC_014150.1 KEGG: bhy:BHWA1_00705 hypothetical protein; hypothetical protein 3156556 9143785 Bmur_2777 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635043.1 3155846 D 526224 CDS YP_003635044.1 296127792 9143786 3156576..3157793 1 NC_014150.1 PFAM: N-6 DNA methylase; KEGG: bhy:BHWA1_00704 modification methylase; N-6 DNA methylase 3157793 9143786 Bmur_2778 Brachyspira murdochii DSM 12563 N-6 DNA methylase YP_003635044.1 3156576 D 526224 CDS YP_003635045.1 296127793 9143787 3158183..3158530 1 NC_014150.1 KEGG: bhy:BHWA1_00137 hypothetical protein; hypothetical protein 3158530 9143787 Bmur_2779 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635045.1 3158183 D 526224 CDS YP_003635046.1 296127794 9143788 3158590..3160047 1 NC_014150.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bhy:BHWA1_00138 hypothetical protein; hypothetical protein 3160047 9143788 Bmur_2780 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635046.1 3158590 D 526224 CDS YP_003635047.1 296127795 9143789 3160291..3160794 1 NC_014150.1 KEGG: bhy:BHWA1_00139 flavin reductase- like, FMN-binding; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein 3160794 9143789 Bmur_2781 Brachyspira murdochii DSM 12563 flavin reductase domain-containing FMN-binding protein YP_003635047.1 3160291 D 526224 CDS YP_003635048.1 296127796 9143790 complement(3160910..3162250) 1 NC_014150.1 KEGG: bhy:BHWA1_00140 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SMART: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase 3162250 9143790 Bmur_2782 Brachyspira murdochii DSM 12563 Glu/Leu/Phe/Val dehydrogenase YP_003635048.1 3160910 R 526224 CDS YP_003635049.1 296127797 9143791 3162440..3162982 1 NC_014150.1 KEGG: bhy:BHWA1_00969 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3162982 9143791 Bmur_2783 Brachyspira murdochii DSM 12563 lipoprotein YP_003635049.1 3162440 D 526224 CDS YP_003635050.1 296127798 9143792 3163047..3164507 1 NC_014150.1 KEGG: hhe:HH0050 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3164507 9143792 Bmur_2784 Brachyspira murdochii DSM 12563 lipoprotein YP_003635050.1 3163047 D 526224 CDS YP_003635051.1 296127799 9143793 3164617..3165774 1 NC_014150.1 TIGRFAM: amidohydrolase; KEGG: bhy:BHWA1_00811 AbgB, metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3165774 9143793 Bmur_2785 Brachyspira murdochii DSM 12563 amidohydrolase YP_003635051.1 3164617 D 526224 CDS YP_003635052.1 296127800 9143794 3165988..3168561 1 NC_014150.1 KEGG: bhy:BHWA1_00756 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3168561 9143794 Bmur_2786 Brachyspira murdochii DSM 12563 lipoprotein YP_003635052.1 3165988 D 526224 CDS YP_003635053.1 296127801 9143795 3168952..3171540 1 NC_014150.1 KEGG: bhy:BHWA1_00752 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3171540 9143795 Bmur_2787 Brachyspira murdochii DSM 12563 lipoprotein YP_003635053.1 3168952 D 526224 CDS YP_003635054.1 296127802 9143796 3171641..3174043 1 NC_014150.1 KEGG: bhy:BHWA1_00755 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3174043 9143796 Bmur_2788 Brachyspira murdochii DSM 12563 lipoprotein YP_003635054.1 3171641 D 526224 CDS YP_003635055.1 296127803 9143797 3174087..3175274 1 NC_014150.1 KEGG: bhy:BHWA1_00751 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3175274 9143797 Bmur_2789 Brachyspira murdochii DSM 12563 lipoprotein YP_003635055.1 3174087 D 526224 CDS YP_003635056.1 296127804 9143798 3175330..3177918 1 NC_014150.1 KEGG: bhy:BHWA1_00751 hypothetical protein; TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; lipoprotein 3177918 9143798 Bmur_2790 Brachyspira murdochii DSM 12563 lipoprotein YP_003635056.1 3175330 D 526224 CDS YP_003635057.1 296127805 9143799 3178193..3178996 1 NC_014150.1 PFAM: flagellin domain protein; KEGG: bhy:BHWA1_00550 flagellar protein; flagellin domain-containing protein 3178996 9143799 Bmur_2791 Brachyspira murdochii DSM 12563 flagellin domain-containing protein YP_003635057.1 3178193 D 526224 CDS YP_003635058.1 296127806 9143800 3179215..3179730 1 NC_014150.1 PFAM: Ferritin Dps family protein; KEGG: bhy:BHWA1_00136 non-heme iron-containing ferritin; ferritin 3179730 9143800 Bmur_2792 Brachyspira murdochii DSM 12563 ferritin YP_003635058.1 3179215 D 526224 CDS YP_003635059.1 296127807 9143801 complement(3179785..3180627) 1 NC_014150.1 KEGG: cpe:CPE0551 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; agmatinase 3180627 9143801 Bmur_2793 Brachyspira murdochii DSM 12563 agmatinase YP_003635059.1 3179785 R 526224 CDS YP_003635060.1 296127808 9143802 complement(3180620..3181480) 1 NC_014150.1 KEGG: aoe:Clos_0384 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; spermidine synthase 3181480 9143802 Bmur_2794 Brachyspira murdochii DSM 12563 spermidine synthase YP_003635060.1 3180620 R 526224 CDS YP_003635061.1 296127809 9143803 complement(3181482..3182939) 1 NC_014150.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: dhd:Dhaf_0181 Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase major region 3182939 9143803 Bmur_2795 Brachyspira murdochii DSM 12563 Orn/Lys/Arg decarboxylase major region YP_003635061.1 3181482 R 526224 CDS YP_003635062.1 296127810 9143804 complement(3182920..3183732) 1 NC_014150.1 KEGG: cbk:CLL_A1011 S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase 3183732 9143804 Bmur_2796 Brachyspira murdochii DSM 12563 S-adenosylmethionine decarboxylase YP_003635062.1 3182920 R 526224 CDS YP_003635063.1 296127811 9143805 3184311..3184841 1 NC_014150.1 PFAM: Ferritin Dps family protein; KEGG: bhy:BHWA1_00697 non-heme iron-containing ferritin; ferritin 3184841 9143805 Bmur_2797 Brachyspira murdochii DSM 12563 ferritin YP_003635063.1 3184311 D 526224 CDS YP_003635064.1 296127812 9143806 3184874..3185707 1 NC_014150.1 KEGG: bhy:BHWA1_00696 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3185707 9143806 Bmur_2798 Brachyspira murdochii DSM 12563 ABC transporter YP_003635064.1 3184874 D 526224 CDS YP_003635065.1 296127813 9143807 complement(3185772..3186701) 1 NC_014150.1 KEGG: bhy:BHWA1_00695 hypothetical protein; hypothetical protein 3186701 9143807 Bmur_2799 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635065.1 3185772 R 526224 CDS YP_003635066.1 296127814 9143808 complement(3186774..3187199) 1 NC_014150.1 KEGG: bhy:BHWA1_00694 Holliday junction resolvase; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF 3187199 9143808 Bmur_2800 Brachyspira murdochii DSM 12563 Holliday junction resolvase YqgF YP_003635066.1 3186774 R 526224 CDS YP_003635067.1 296127815 9143809 complement(3187216..3188451) 1 NC_014150.1 PFAM: peptidase U32; KEGG: bhy:BHWA1_00693 peptidase; peptidase U32 3188451 9143809 Bmur_2801 Brachyspira murdochii DSM 12563 peptidase U32 YP_003635067.1 3187216 R 526224 CDS YP_003635068.1 296127816 9143810 complement(3188938..3190464) 1 NC_014150.1 KEGG: bhy:BHWA1_00629 UDP-N-acetylmuramoylalanyl-D- glutamate--2,6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase 3190464 9143810 Bmur_2802 Brachyspira murdochii DSM 12563 UDP-N-acetylmuramyl tripeptide synthetase YP_003635068.1 3188938 R 526224 CDS YP_003635069.1 296127817 9143811 3190642..3192144 1 NC_014150.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: bhy:BHWA1_00628 glycogen/starch synthase, ADP- glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; glycogen/starch synthase 3192144 9143811 Bmur_2803 Brachyspira murdochii DSM 12563 glycogen/starch synthase YP_003635069.1 3190642 D 526224 CDS YP_003635070.1 296127818 9143812 3192187..3192684 1 NC_014150.1 PFAM: protein of unknown function DUF520; KEGG: bhy:BHWA1_00627 nucleotide-binding protein; hypothetical protein 3192684 9143812 Bmur_2804 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635070.1 3192187 D 526224 CDS YP_003635071.1 296127819 9143813 complement(3192765..3193391) 1 NC_014150.1 TIGRFAM: LexA repressor; KEGG: bhy:BHWA1_00626 LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24/S26A/S26B, conserved region; LexA family transcriptional regulator 3193391 9143813 Bmur_2805 Brachyspira murdochii DSM 12563 LexA family transcriptional regulator YP_003635071.1 3192765 R 526224 CDS YP_003635072.1 296127820 9143814 complement(3193564..3194214) 1 NC_014150.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bhy:BHWA1_00002 ribulose-phosphate 3- epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 3194214 9143814 Bmur_2806 Brachyspira murdochii DSM 12563 ribulose-phosphate 3-epimerase YP_003635072.1 3193564 R 526224 CDS YP_003635073.1 296127821 9143815 complement(3194254..3194994) 1 NC_014150.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: bhy:BHWA1_02665 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 3194994 9143815 Bmur_2807 Brachyspira murdochii DSM 12563 ribonuclease III YP_003635073.1 3194254 R 526224 CDS YP_003635074.1 296127822 9143816 complement(3195091..3196680) 1 NC_014150.1 SMART: von Willebrand factor type A; KEGG: bhy:BHWA1_02664 hypothetical protein containing a von Willebrand factor type A (vWA) domain; von Willebrand factor A 3196680 9143816 Bmur_2808 Brachyspira murdochii DSM 12563 von Willebrand factor A YP_003635074.1 3195091 R 526224 CDS YP_003635075.1 296127823 9143817 complement(3196712..3198292) 1 NC_014150.1 KEGG: bhy:BHWA1_02663 AAA+ ATPase associated with various cellular activities; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA 3198292 9143817 Bmur_2809 Brachyspira murdochii DSM 12563 ATPase AAA YP_003635075.1 3196712 R 526224 CDS YP_003635076.1 296127824 9143818 3198822..3199769 1 NC_014150.1 KEGG: bhy:BHWA1_02662 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3199769 9143818 Bmur_2810 Brachyspira murdochii DSM 12563 ABC transporter YP_003635076.1 3198822 D 526224 CDS YP_003635077.1 296127825 9143819 3199770..3200513 1 NC_014150.1 KEGG: bhy:BHWA1_02661 ABC transporter permease; ABC transporter permease 3200513 9143819 Bmur_2811 Brachyspira murdochii DSM 12563 ABC transporter permease YP_003635077.1 3199770 D 526224 CDS YP_003635078.1 296127826 9143820 3200552..3201580 1 NC_014150.1 KEGG: bhy:BHWA1_02660 hypothetical protein; hypothetical protein 3201580 9143820 Bmur_2812 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635078.1 3200552 D 526224 CDS YP_003635079.1 296127827 9143821 3201597..3202154 1 NC_014150.1 KEGG: bhy:BHWA1_02659 CDP-diacylglycerol--glycerol- 3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 3202154 9143821 Bmur_2813 Brachyspira murdochii DSM 12563 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_003635079.1 3201597 D 526224 CDS YP_003635080.1 296127828 9143822 complement(3202636..3203838) 1 NC_014150.1 PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_00557 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 3203838 9143822 Bmur_2814 Brachyspira murdochii DSM 12563 sodium:dicarboxylate symporter YP_003635080.1 3202636 R 526224 CDS YP_003635081.1 296127829 9143823 3204267..3204662 1 NC_014150.1 KEGG: similar to conserved hypothetical protein; hypothetical protein 3204662 9143823 Bmur_2815 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635081.1 3204267 D 526224 CDS YP_003635082.1 296127830 9143824 3204687..3204890 1 NC_014150.1 KEGG: bhy:BHWA1_02400 hypothetical protein; hypothetical protein 3204890 9143824 Bmur_2816 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635082.1 3204687 D 526224 CDS YP_003635083.1 296127831 9143825 3204954..3205517 1 NC_014150.1 KEGG: bhy:BHWA1_02397 hypothetical protein; hypothetical protein 3205517 9143825 Bmur_2817 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635083.1 3204954 D 526224 CDS YP_003635084.1 296127832 9143826 3205530..3206123 1 NC_014150.1 KEGG: bhy:BHWA1_01787 OmpA family protein; hypothetical protein 3206123 9143826 Bmur_2818 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635084.1 3205530 D 526224 CDS YP_003635085.1 296127833 9143827 3206141..3206488 1 NC_014150.1 KEGG: bhy:BHWA1_00619 hypothetical protein; hypothetical protein 3206488 9143827 Bmur_2819 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635085.1 3206141 D 526224 CDS YP_003635086.1 296127834 9143828 3206463..3206807 1 NC_014150.1 KEGG: bhy:BHWA1_00619 hypothetical protein; hypothetical protein 3206807 9143828 Bmur_2820 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635086.1 3206463 D 526224 CDS YP_003635087.1 296127835 9143829 complement(3206911..3207810) 1 NC_014150.1 PFAM: protein of unknown function DUF62; KEGG: bhy:BHWA1_00732 hypothetical protein; hypothetical protein 3207810 9143829 Bmur_2821 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635087.1 3206911 R 526224 CDS YP_003635088.1 296127836 9143830 complement(3208059..3209021) 1 NC_014150.1 TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: bhy:BHWA1_00731 fructose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-1,6-bisphosphate aldolase 3209021 9143830 Bmur_2822 Brachyspira murdochii DSM 12563 fructose-1,6-bisphosphate aldolase YP_003635088.1 3208059 R 526224 CDS YP_003635089.1 296127837 9143831 3209373..3211304 1 NC_014150.1 SMART: Threonyl/alanyl tRNA synthetase SAD; TIGRFAM: threonyl-tRNA synthetase; KEGG: bhy:BHWA1_00727 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; threonyl-tRNA synthetase 3211304 9143831 Bmur_2823 Brachyspira murdochii DSM 12563 threonyl-tRNA synthetase YP_003635089.1 3209373 D 526224 CDS YP_003635090.1 296127838 9143832 3211317..3211895 1 NC_014150.1 KEGG: bhy:BHWA1_00726 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like; translation initiation factor IF-3 3211895 9143832 Bmur_2824 Brachyspira murdochii DSM 12563 translation initiation factor IF-3 YP_003635090.1 3211317 D 526224 CDS YP_003635091.1 296127839 9143833 3211990..3212193 1 NC_014150.1 KEGG: bhy:BHWA1_00725 RpmI, 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; 50S ribosomal protein L35 3212193 9143833 Bmur_2825 Brachyspira murdochii DSM 12563 50S ribosomal protein L35 YP_003635091.1 3211990 D 526224 CDS YP_003635092.1 296127840 9143834 3212209..3212562 1 NC_014150.1 KEGG: bhy:BHWA1_00724 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 3212562 9143834 Bmur_2826 Brachyspira murdochii DSM 12563 50S ribosomal protein L20 YP_003635092.1 3212209 D 526224 CDS YP_003635093.1 296127841 9143835 complement(3212805..3213920) 1 NC_014150.1 PFAM: OmpA/MotB domain protein; KEGG: predicted protein; OmpA/MotB domain-containing protein 3213920 9143835 Bmur_2827 Brachyspira murdochii DSM 12563 OmpA/MotB domain-containing protein YP_003635093.1 3212805 R 526224 CDS YP_003635094.1 296127842 9143836 complement(3213987..3215492) 1 NC_014150.1 KEGG: bhy:BHWA1_02397 hypothetical protein; hypothetical protein 3215492 9143836 Bmur_2828 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635094.1 3213987 R 526224 CDS YP_003635095.1 296127843 9143837 complement(3215519..3216742) 1 NC_014150.1 KEGG: transporter; hypothetical protein 3216742 9143837 Bmur_2829 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635095.1 3215519 R 526224 CDS YP_003635096.1 296127844 9143838 complement(3216783..3218003) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 3218003 9143838 Bmur_2830 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635096.1 3216783 R 526224 CDS YP_003635097.1 296127845 9143839 complement(3218019..3219233) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 3219233 9143839 Bmur_2831 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635097.1 3218019 R 526224 CDS YP_003635098.1 296127846 9143840 complement(3219246..3219473) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 3219473 9143840 Bmur_2832 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635098.1 3219246 R 526224 CDS YP_003635099.1 296127847 9143841 complement(3220391..3221266) 1 NC_014150.1 KEGG: bhy:BHWA1_00616 pseudouridylate synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 3221266 9143841 Bmur_2833 Brachyspira murdochii DSM 12563 tRNA pseudouridine synthase B YP_003635099.1 3220391 R 526224 CDS YP_003635100.1 296127848 9143842 complement(3221308..3222051) 1 NC_014150.1 KEGG: bhy:BHWA1_00615 hypothetical protein; hypothetical protein 3222051 9143842 Bmur_2834 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635100.1 3221308 R 526224 CDS YP_003635101.1 296127849 9143843 3222169..3222792 1 NC_014150.1 KEGG: bhy:BHWA1_00614 hypothetical protein; hypothetical protein 3222792 9143843 Bmur_2835 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635101.1 3222169 D 526224 CDS YP_003635102.1 296127850 9143844 complement(3222850..3224022) 1 NC_014150.1 PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3695 major facilitator superfamily MFS_1; major facilitator superfamily protein 3224022 9143844 Bmur_2836 Brachyspira murdochii DSM 12563 major facilitator superfamily protein YP_003635102.1 3222850 R 526224 CDS YP_003635103.1 296127851 9143845 complement(3224207..3224851) 1 NC_014150.1 KEGG: bhy:BHWA1_00399 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 3224851 9143845 Bmur_2837 Brachyspira murdochii DSM 12563 phosphate uptake regulator PhoU YP_003635103.1 3224207 R 526224 CDS YP_003635104.1 296127852 9143846 complement(3224903..3225700) 1 NC_014150.1 TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; KEGG: bhy:BHWA1_00400 phosphate ABC transporter, ATP-binding protein; SMART: AAA ATPase; phosphate ABC transporter ATPase 3225700 9143846 Bmur_2838 Brachyspira murdochii DSM 12563 phosphate ABC transporter ATPase YP_003635104.1 3224903 R 526224 CDS YP_003635105.1 296127853 9143847 complement(3225733..3227523) 1 NC_014150.1 KEGG: bhy:BHWA1_00401 phosphate ABC transporter, permease; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 3227523 9143847 Bmur_2839 Brachyspira murdochii DSM 12563 phosphate ABC transporter permease YP_003635105.1 3225733 R 526224 CDS YP_003635106.1 296127854 9143848 complement(3227644..3228450) 1 NC_014150.1 KEGG: bhy:BHWA1_00402 phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein 3228450 9143848 Bmur_2840 Brachyspira murdochii DSM 12563 phosphate ABC transporter substrate-binding protein YP_003635106.1 3227644 R 526224 CDS YP_003635107.1 296127855 9143849 complement(3228676..3229188) 1 NC_014150.1 PFAM: Protein of unknown function DUF2147; KEGG: bhy:BHWA1_00182 hypothetical protein; hypothetical protein 3229188 9143849 Bmur_2841 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635107.1 3228676 R 526224 CDS YP_003635108.1 296127856 9143850 3229333..3230457 1 NC_014150.1 KEGG: bhy:BHWA1_00183 aminopeptidase; aminopeptidase 3230457 9143850 Bmur_2842 Brachyspira murdochii DSM 12563 aminopeptidase YP_003635108.1 3229333 D 526224 CDS YP_003635109.1 296127857 9143851 3230474..3230968 1 NC_014150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bhy:BHWA1_00184 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 3230968 9143851 Bmur_2843 Brachyspira murdochii DSM 12563 N-acetyltransferase GCN5 YP_003635109.1 3230474 D 526224 CDS YP_003635110.1 296127858 9143852 3231422..3232126 1 NC_014150.1 TIGRFAM: uridylate kinase; KEGG: bhy:BHWA1_00186 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 3232126 9143852 Bmur_2844 Brachyspira murdochii DSM 12563 uridylate kinase YP_003635110.1 3231422 D 526224 CDS YP_003635111.1 296127859 9143853 3232150..3233166 1 NC_014150.1 KEGG: bhy:BHWA1_00187 hypothetical protein; hypothetical protein 3233166 9143853 Bmur_2845 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635111.1 3232150 D 526224 CDS YP_003635112.1 296127860 9143854 complement(3233399..3233716) 1 NC_014150.1 KEGG: bhy:BHWA1_00215 hypothetical protein; hypothetical protein 3233716 9143854 Bmur_2846 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635112.1 3233399 R 526224 CDS YP_003635113.1 296127861 9143855 complement(3233713..3234003) 1 NC_014150.1 KEGG: bhy:BHWA1_00214 hypothetical protein; hypothetical protein 3234003 9143855 Bmur_2847 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635113.1 3233713 R 526224 CDS YP_003635114.1 296127862 9143856 complement(3234104..3234775) 1 NC_014150.1 KEGG: bhy:BHWA1_02058 hypothetical protein; hypothetical protein 3234775 9143856 Bmur_2848 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635114.1 3234104 R 526224 CDS YP_003635115.1 296127863 9143857 3235044..3236534 1 NC_014150.1 KEGG: bhy:BHWA1_00372 hypothetical protein; hypothetical protein 3236534 9143857 Bmur_2849 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635115.1 3235044 D 526224 CDS YP_003635116.1 296127864 9143858 3236551..3237450 1 NC_014150.1 PFAM: patatin; KEGG: bhy:BHWA1_00371 patatin-like phospholipase; patatin 3237450 9143858 Bmur_2850 Brachyspira murdochii DSM 12563 patatin YP_003635116.1 3236551 D 526224 CDS YP_003635117.1 296127865 9143859 complement(3237452..3237757) 1 NC_014150.1 KEGG: hypothetical protein; hypothetical protein 3237757 9143859 Bmur_2851 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635117.1 3237452 R 526224 CDS YP_003635118.1 296127866 9143860 complement(3237754..3238836) 1 NC_014150.1 PFAM: glycosyl transferase group 1; KEGG: bhy:BHWA1_00225 hypothetical protein; group 1 glycosyl transferase 3238836 9143860 Bmur_2852 Brachyspira murdochii DSM 12563 group 1 glycosyl transferase YP_003635118.1 3237754 R 526224 CDS YP_003635119.1 296127867 9143861 3238909..3241650 1 NC_014150.1 PFAM: hypothetical protein; KEGG: bhy:BHWA1_00226 TPR domain-containing protein; hypothetical protein 3241650 9143861 Bmur_2853 Brachyspira murdochii DSM 12563 hypothetical protein YP_003635119.1 3238909 D 526224 CDS