-- dump date 20140619_004951 -- class Genbank::CDS -- table cds_note -- id note YP_003153479.1 PFAM: Bacterial dnaA protein helix-turn-helix domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_003153480.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, central domain; DNA polymerase III beta subunit, N-terminal domain; TIGRFAM: DNA polymerase III, beta subunit YP_003153481.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_003153482.1 PFAM: Protein of unknown function (DUF721) YP_003153483.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; RibD C-terminal domain; TIGRFAM: riboflavin biosynthesis protein RibD; riboflavin-specific deaminase C-terminal domain YP_003153484.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_003153485.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_003153486.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_003153487.1 PFAM: DNA gyrase B; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Toprim domain; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_003153488.1 negatively supercoils closed circular double-stranded DNA YP_003153490.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_003153492.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH) YP_003153493.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_003153495.1 PFAM: Integral membrane protein DUF6 YP_003153497.1 PFAM: short chain dehydrogenase YP_003153498.1 PFAM: MerR family regulatory protein YP_003153499.1 PFAM: 4Fe-4S binding domain YP_003153500.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: redox-sensitive transcriptional activator SoxR YP_003153501.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_003153502.1 PFAM: ABC transporter YP_003153503.1 PFAM: Predicted permease YP_003153504.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_003153505.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003153506.1 PFAM: Amino acid permease YP_003153508.1 PFAM: Flavodoxin YP_003153509.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_003153510.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_003153511.1 PFAM: Transposase DDE domain YP_003153512.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003153513.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003153514.1 PFAM: AsnC family YP_003153515.1 PFAM: Dehydrogenase E1 component YP_003153516.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_003153517.1 PFAM: Biotin-requiring enzyme; 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain YP_003153518.1 PFAM: Carboxyl transferase domain YP_003153519.1 PFAM: Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Biotin-requiring enzyme YP_003153520.1 PFAM: MaoC like domain YP_003153521.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_003153522.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_003153523.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_003153525.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_003153526.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_003153527.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_003153528.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_003153529.1 PFAM: Cadherin domain; Protein of unknown function (DUF1593) YP_003153530.1 PFAM: Xylose isomerase-like TIM barrel YP_003153531.1 PFAM: short chain dehydrogenase YP_003153532.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_003153533.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter YP_003153535.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_003153536.1 PFAM: short chain dehydrogenase YP_003153537.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_003153538.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_003153539.1 PFAM: Protein of unknown function (DUF718) YP_003153540.1 PFAM: Aldo/keto reductase family YP_003153541.1 PFAM: Amidohydrolase YP_003153542.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_003153543.1 PFAM: Toxic anion resistance protein (TelA) YP_003153545.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153546.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153547.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_003153548.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_003153549.1 PFAM: UTRA domain; Bacterial regulatory proteins, gntR family YP_003153551.1 PFAM: MlrC C-terminus; Protein of unknown function (DUF1485) YP_003153552.1 PFAM: Alpha-L-fucosidase YP_003153553.1 PFAM: Domain of unknown function DUF81 YP_003153554.1 PFAM: Aldo/keto reductase family YP_003153555.1 PFAM: Family 4 glycosyl hydrolase YP_003153556.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003153557.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153558.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153559.1 PFAM: pfkB family carbohydrate kinase YP_003153560.1 PFAM: Sodium/hydrogen exchanger family YP_003153561.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_003153562.1 PFAM: Bacterial protein of unknown function (DUF899) YP_003153563.1 PFAM: RibD C-terminal domain YP_003153564.1 PFAM: Bacterial regulatory proteins, tetR family YP_003153566.1 PFAM: Methyltransferase domain YP_003153570.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin YP_003153571.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_003153573.1 PFAM: Branched-chain amino acid transport system / permease component YP_003153574.1 PFAM: Branched-chain amino acid transport system / permease component YP_003153575.1 PFAM: ABC transporter YP_003153576.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003153577.1 PFAM: ABC transporter YP_003153578.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003153580.1 PFAM: Bacterial protein of unknown function (DUF916) YP_003153581.1 PFAM: Bacterial Ig-like domain (group 4) YP_003153583.1 PFAM: Sulfatase YP_003153585.1 PFAM: Aldo/keto reductase family YP_003153586.1 PFAM: Sulfatase YP_003153588.1 PFAM: Phosphoglycerate mutase family YP_003153589.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_003153590.1 PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit YP_003153591.1 PFAM: DAK2 domain YP_003153592.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_003153593.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003153594.1 PFAM: Bacterial extracellular solute-binding protein YP_003153595.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153596.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153597.1 PFAM: ROK family YP_003153598.1 PFAM: Protein of unknown function, DUF624 YP_003153599.1 PFAM: Domain of unknown function DUF81 YP_003153601.1 PFAM: ROK family; MarR family YP_003153602.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_003153603.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153604.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153605.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_003153606.1 PFAM: ABC transporter YP_003153607.1 PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, sugar binding domain YP_003153608.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family YP_003153610.1 PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: YidE/YbjL duplication YP_003153611.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_003153612.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_003153613.1 PFAM: Major Facilitator Superfamily YP_003153614.1 PFAM: MarR family YP_003153615.1 PFAM: pfkB family carbohydrate kinase YP_003153616.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_003153617.1 PFAM: CBS domain pair; Divalent cation transporter; MgtE intracellular N domain; TIGRFAM: Mg2+ transporter (mgtE) YP_003153618.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003153619.1 PFAM: Bacterial extracellular solute-binding protein YP_003153620.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153621.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153622.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides YP_003153623.1 PFAM: HNH endonuclease YP_003153624.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153625.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153626.1 PFAM: Bacterial extracellular solute-binding protein YP_003153627.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain YP_003153628.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003153630.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003153631.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C terminal domain YP_003153632.1 PFAM: Glycosyl hydrolase family 10 YP_003153634.1 PFAM: Bacterial extracellular solute-binding protein YP_003153635.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153636.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153637.1 PFAM: Acetyl xylan esterase (AXE1) YP_003153638.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003153639.1 PFAM: ROK family YP_003153640.1 catalyzes the interconversion of D-xylose to D-xylulose YP_003153641.1 PFAM: FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain; TIGRFAM: D-xylulose kinase YP_003153642.1 PFAM: ThiF family; Rhodanese-like domain; MoeZ/MoeB domain YP_003153643.1 PFAM: Thiazole biosynthesis protein ThiG YP_003153644.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_003153645.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO YP_003153646.1 PFAM: short chain dehydrogenase YP_003153649.1 PFAM: Bacterial regulatory proteins, lacI family YP_003153650.1 PFAM: Bacterial extracellular solute-binding protein YP_003153651.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153652.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153653.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680) YP_003153654.1 PFAM: Bacterial Ig-like domain (group 4) YP_003153655.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003153656.1 PFAM: Sodium:solute symporter family YP_003153658.1 PFAM: Aldo/keto reductase family YP_003153659.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily YP_003153661.1 PFAM: ROK family YP_003153662.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003153663.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003153664.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_003153665.1 PFAM: NUDIX domain YP_003153666.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase YP_003153668.1 PFAM: Glycosyl transferases group 1 YP_003153669.1 PFAM: Glycosyl transferases group 1 YP_003153670.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_003153671.1 PFAM: Phosphotransferase enzyme family YP_003153672.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_003153673.1 PFAM: ABC-2 type transporter; TIGRFAM: YhgE/Pip N-terminal domain; YhgE/Pip C-terminal domain; X-X-X-Leu-X-X-Gly heptad repeats YP_003153674.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain YP_003153675.1 PFAM: Acetyltransferase (GNAT) family YP_003153677.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_003153680.1 PFAM: Rhomboid family YP_003153681.1 PFAM: Pyroglutamyl peptidase; TIGRFAM: pyroglutamyl-peptidase I YP_003153682.1 PFAM: Acetyltransferase (GNAT) family YP_003153683.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_003153684.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_003153686.1 PFAM: Alpha amylase, catalytic domain YP_003153687.1 PFAM: Putative esterase YP_003153688.1 PFAM: YCII-related domain YP_003153690.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_003153693.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_003153694.1 PFAM: ABC transporter YP_003153695.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_003153696.1 PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003153697.1 PFAM: STAS domain; Sulfate transporter family YP_003153698.1 PFAM: Bacterial regulatory protein, arsR family YP_003153701.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2087) YP_003153702.1 PFAM: Aldo/keto reductase family YP_003153704.1 PFAM: Glycosyl transferase family 2 YP_003153705.1 PFAM: Methyltransferase domain YP_003153706.1 PFAM: Staphylococcal nuclease homologue YP_003153708.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003153709.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003153710.1 PFAM: CAAX amino terminal protease family YP_003153711.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_003153715.1 PFAM: ABC transporter YP_003153716.1 PFAM: CAAX amino terminal protease family YP_003153717.1 PFAM: Beta-lactamase YP_003153718.1 PFAM: Transporter associated domain; Domain of unknown function DUF21; CBS domain pair YP_003153719.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_003153721.1 PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_003153723.1 PFAM: Aldehyde dehydrogenase family YP_003153724.1 PFAM: Peptidase family M48 YP_003153725.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_003153727.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_003153730.1 PFAM: Putative esterase YP_003153731.1 PFAM: Transglycosylase-like domain YP_003153732.1 PFAM: Bacterial regulatory proteins, tetR family YP_003153733.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_003153734.1 PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP YP_003153735.1 PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain YP_003153736.1 PFAM: Methylenetetrahydrofolate reductase YP_003153737.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_003153738.1 PFAM: Region found in RelA / SpoT proteins YP_003153739.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_003153740.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_003153741.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose reductase YP_003153742.1 TIGRFAM: histidinol phosphate phosphatase HisJ family YP_003153744.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase YP_003153745.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_003153746.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_003153747.1 PFAM: AcrB/AcrD/AcrF family YP_003153748.1 PFAM: Glycosyl transferase family 2 YP_003153750.1 PFAM: Glycosyl transferase family 2 YP_003153751.1 PFAM: CDP-alcohol phosphatidyltransferase YP_003153754.1 PFAM: PKD domain; Laminin G domain YP_003153756.1 PFAM: Chain length determinant protein; TIGRFAM: capsular exopolysaccharide family YP_003153757.1 PFAM: Acyltransferase family YP_003153758.1 PFAM: Polysaccharide biosynthesis protein YP_003153759.1 PFAM: Glycosyl transferases group 1 YP_003153760.1 PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF1972) YP_003153761.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; HAMP domain YP_003153762.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_003153767.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_003153768.1 PFAM: Acetyltransferase (GNAT) family YP_003153771.1 PFAM: VTC domain YP_003153772.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_003153773.1 PFAM: Protein of unknown function, DUF485 YP_003153774.1 PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily YP_003153776.1 PFAM: Protein of unknown function (DUF421) YP_003153777.1 PFAM: OsmC-like protein YP_003153781.1 PFAM: Permease family; OHCU decarboxylase; TIGRFAM: uracil-xanthine permease; xanthine permease YP_003153782.1 PFAM: Major Facilitator Superfamily YP_003153783.1 PFAM: alpha/beta hydrolase fold YP_003153786.1 PFAM: Protein kinase domain YP_003153787.1 PFAM: Beta-lactamase YP_003153788.1 PFAM: SWIM zinc finger YP_003153789.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_003153792.1 PFAM: Transcriptional regulatory protein, C terminal YP_003153793.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG YP_003153794.1 PFAM: UreD urease accessory protein YP_003153795.1 PFAM: UreF YP_003153796.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_003153797.1 PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit YP_003153798.1 PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit YP_003153799.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_003153800.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_003153801.1 PFAM: ABC transporter YP_003153802.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153803.1 PFAM: NMT1/THI5 like YP_003153804.1 PFAM: Response regulator receiver domain YP_003153805.1 PFAM: Histidine kinase YP_003153807.1 PFAM: ABC transporter YP_003153808.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153809.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_003153810.1 PFAM: short chain dehydrogenase YP_003153811.1 PFAM: Glycosyl hydrolase family 10 YP_003153812.1 PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family YP_003153813.1 PFAM: Prolyl oligopeptidase family; Prolyl oligopeptidase, N-terminal beta-propeller domain YP_003153816.1 PFAM: Universal stress protein family YP_003153817.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_003153819.1 PFAM: Bacterial regulatory proteins, tetR family YP_003153820.1 PFAM: Peptidase family M20/M25/M40 YP_003153821.1 PFAM: Ferritin-like domain YP_003153823.1 PFAM: Fe-S metabolism associated domain YP_003153824.1 PFAM: Rhodanese-like domain YP_003153825.1 PFAM: Asparaginase YP_003153826.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_003153827.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA YP_003153830.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; TIGRFAM: ATP-dependent helicase HrpB YP_003153833.1 PFAM: Predicted membrane protein (DUF2306) YP_003153834.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_003153835.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter YP_003153837.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_003153838.1 PFAM: NUDIX domain YP_003153839.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_003153840.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: L-aspartate oxidase YP_003153841.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide YP_003153842.1 PFAM: Aminotransferase class-V YP_003153845.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate YP_003153846.1 PFAM: Putative sugar-binding domain; Sigma-70, region 4 YP_003153847.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_003153848.1 PFAM: NUDIX domain YP_003153849.1 PFAM: Aldo/keto reductase family YP_003153850.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_003153851.1 PFAM: Xylose isomerase-like TIM barrel YP_003153855.1 PFAM: NlpC/P60 family YP_003153856.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_003153857.1 PFAM: Protein of unknown function (DUF819) YP_003153859.1 PFAM: RibD C-terminal domain YP_003153860.1 PFAM: Glycosyl hydrolases family 15 YP_003153861.1 PFAM: Glycosyl hydrolase family 53 YP_003153862.1 PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase YP_003153863.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003153864.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153865.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153866.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003153867.1 PFAM: Serine carboxypeptidase YP_003153869.1 PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily YP_003153870.1 PFAM: Bacterial extracellular solute-binding protein YP_003153871.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153872.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153873.1 PFAM: Glycosyl hydrolase family 53 YP_003153874.1 PFAM: Glycosyl hydrolase family 53 YP_003153875.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153876.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153877.1 PFAM: Bacterial extracellular solute-binding protein YP_003153878.1 PFAM: Serpin (serine protease inhibitor) YP_003153879.1 PFAM: Beta-galactosidase YP_003153880.1 PFAM: Bacterial extracellular solute-binding protein YP_003153881.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153882.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153883.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_003153884.1 PFAM: FAD binding domain YP_003153885.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_003153888.1 PFAM: Helix-turn-helix; Cupin domain YP_003153889.1 PFAM: FAD dependent oxidoreductase YP_003153890.1 PFAM: Major Facilitator Superfamily YP_003153891.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_003153892.1 PFAM: Helix-turn-helix YP_003153894.1 PFAM: Transcriptional regulator PadR-like family YP_003153895.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_003153896.1 PFAM: WD40-like Beta Propeller Repeat YP_003153898.1 PFAM: Methyltransferase domain YP_003153899.1 PFAM: ABC transporter YP_003153900.1 PFAM: Periplasmic binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003153901.1 PFAM: FecCD transport family YP_003153903.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin YP_003153904.1 TIGRFAM: lycopene cyclase domain YP_003153905.1 TIGRFAM: lycopene cyclase domain YP_003153906.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase YP_003153907.1 PFAM: Squalene/phytoene synthase YP_003153909.1 PFAM: NAD dependent epimerase/dehydratase family YP_003153910.1 PFAM: Polyprenyl synthetase YP_003153911.1 PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1 YP_003153912.1 PFAM: MarR family YP_003153913.1 PFAM: FAD binding domain YP_003153914.1 PFAM: Methyltransferase domain YP_003153915.1 PFAM: Chalcone and stilbene synthases, C-terminal domain; Chalcone and stilbene synthases, N-terminal domain YP_003153916.1 PFAM: ANTAR domain YP_003153917.1 PFAM: Stress-induced bacterial acidophilic repeat motif YP_003153918.1 PFAM: Integrase core domain YP_003153919.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_003153920.1 PFAM: Amidohydrolase family; Amidohydrolase family; D-aminoacylase, C-terminal region YP_003153921.1 PFAM: Alanine racemase, N-terminal domain YP_003153923.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_003153924.1 PFAM: Proline racemase YP_003153925.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_003153926.1 PFAM: short chain dehydrogenase YP_003153927.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; TIGRFAM: cyclohexanecarboxyl-CoA dehydrogenase YP_003153928.1 PFAM: Bacterial regulatory proteins, tetR family YP_003153929.1 PFAM: Major Facilitator Superfamily YP_003153932.1 PFAM: YeeE/YedE family (DUF395) YP_003153933.1 PFAM: SirA-like protein YP_003153934.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain YP_003153935.1 PFAM: short chain dehydrogenase YP_003153936.1 PFAM: Sulfatase YP_003153937.1 PFAM: Berberine and berberine like; FAD binding domain YP_003153939.1 PFAM: Antibiotic biosynthesis monooxygenase YP_003153940.1 PFAM: GlcNAc-PI de-N-acetylase; Domain of unknown function (DUF1083) YP_003153941.1 PFAM: ROK family YP_003153942.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003153943.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit YP_003153944.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153945.1 PFAM: pfkB family carbohydrate kinase; Lyase; TIGRFAM: argininosuccinate lyase YP_003153946.1 PFAM: Amidase YP_003153948.1 PFAM: Amino acid permease YP_003153949.1 PFAM: Domain of unknown function (DUF377) YP_003153950.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153951.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153952.1 PFAM: Bacterial extracellular solute-binding protein YP_003153953.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_003153957.1 PFAM: alpha/beta hydrolase fold YP_003153959.1 PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_003153960.1 PFAM: Family 4 glycosyl hydrolase YP_003153961.1 PFAM: Universal stress protein family YP_003153962.1 PFAM: PQQ enzyme repeat; Calcineurin-like phosphoesterase YP_003153963.1 PFAM: Sulfatase YP_003153964.1 PFAM: Alpha-N-acetylglucosaminidase (NAGLU) YP_003153966.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_003153967.1 PFAM: UTRA domain; Bacterial regulatory proteins, gntR family YP_003153968.1 PFAM: Bacterial extracellular solute-binding protein YP_003153969.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153970.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003153971.1 PFAM: Alpha-L-fucosidase YP_003153972.1 PFAM: Transposase DDE domain YP_003153973.1 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent YP_003153975.1 PFAM: NmrA-like family YP_003153976.1 PFAM: SPFH domain / Band 7 family YP_003153977.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003153978.1 PFAM: Peptidase family C69 YP_003153981.1 PFAM: Restriction endonuclease YP_003153983.1 TIGRFAM: DNA binding domain, excisionase family YP_003153987.1 PFAM: Helicase conserved C-terminal domain YP_003153988.1 PFAM: Restriction endonuclease YP_003153989.1 PFAM: Transposase YP_003153990.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit YP_003153991.1 PFAM: FRG domain YP_003153992.1 PFAM: Transposase YP_003153993.1 PFAM: DNA methylase YP_003153994.1 PFAM: Type III restriction enzyme, res subunit YP_003153995.1 PFAM: Protein of unknown function DUF262 YP_003153996.1 PFAM: Protein of unknown function (DUF1524) YP_003153999.1 PFAM: MgtC family YP_003154000.1 PFAM: Uncharacterized protein family UPF0027 YP_003154001.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_003154002.1 PFAM: McrBC 5-methylcytosine restriction system component YP_003154005.1 PFAM: Protein kinase domain YP_003154006.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_003154007.1 PFAM: Fic/DOC family YP_003154008.1 PFAM: Predicted ATPase of the ABC class YP_003154010.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH); TIGRFAM: ectoine hydroxylase YP_003154011.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_003154012.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154013.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154014.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_003154015.1 PFAM: Luciferase-like monooxygenase YP_003154017.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain YP_003154019.1 PFAM: PQQ enzyme repeat YP_003154020.1 PFAM: short chain dehydrogenase YP_003154021.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_003154022.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_003154023.1 PFAM: Ferritin-like domain YP_003154024.1 PFAM: ROK family YP_003154025.1 PFAM: Glycosyl hydrolase family 20, catalytic domain YP_003154027.1 PFAM: Bacterial extracellular solute-binding protein YP_003154028.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154029.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154031.1 PFAM: RibD C-terminal domain YP_003154032.1 PFAM: CsbD-like YP_003154033.1 Catalyzes the conversion of citrate to isocitrate YP_003154034.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_003154037.1 PFAM: Domain of unknown function (DUF1990) YP_003154038.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_003154039.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003154040.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_003154042.1 PFAM: Bacterial regulatory proteins, lacI family YP_003154043.1 PFAM: alpha/beta hydrolase fold YP_003154044.1 PFAM: Domain of unknown function (DUF323) YP_003154045.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_003154046.1 PFAM: Major Facilitator Superfamily YP_003154047.1 PFAM: Helix-turn-helix YP_003154048.1 PFAM: Peptidase propeptide and YPEB domain YP_003154049.1 PFAM: Acetyltransferase (GNAT) family YP_003154051.1 PFAM: Aldo/keto reductase family YP_003154054.1 PFAM: UvrD/REP helicase YP_003154057.1 PFAM: Glutaminase YP_003154059.1 PFAM: Sulfatase YP_003154061.1 PFAM: SPFH domain / Band 7 family YP_003154062.1 PFAM: Glutathione peroxidase YP_003154063.1 PFAM: pfkB family carbohydrate kinase YP_003154064.1 PFAM: Penicillin binding protein transpeptidase domain YP_003154065.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_003154066.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family; Pyridine nucleotide-disulphide oxidoreductase; Glucose inhibited division protein A YP_003154067.1 PFAM: Isochorismatase family YP_003154068.1 PFAM: HNH endonuclease YP_003154070.1 PFAM: Protein of unknown function (DUF1648) YP_003154071.1 PFAM: MerR family regulatory protein; Protein phosphatase 2C YP_003154073.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat YP_003154074.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_003154075.1 PFAM: Domain of unknown function (DUF1992) YP_003154076.1 PFAM: Predicted permease YP_003154077.1 PFAM: ABC transporter YP_003154078.1 PFAM: Transcriptional regulator PadR-like family YP_003154079.1 PFAM: Phosphotransferase enzyme family YP_003154082.1 PFAM: Bacterial extracellular solute-binding protein YP_003154083.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154084.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154085.1 PFAM: Amidohydrolase family YP_003154086.1 PFAM: ABC transporter YP_003154087.1 PFAM: ABC-2 type transporter YP_003154088.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003154089.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003154090.1 PFAM: Sodium Bile acid symporter family YP_003154091.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_003154093.1 PFAM: ABC transporter YP_003154094.1 PFAM: Bacterial regulatory protein, arsR family YP_003154100.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_003154101.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_003154102.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154103.1 PFAM: Rhodanese-like domain YP_003154104.1 PFAM: Predicted membrane protein (DUF2319) YP_003154105.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_003154106.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_003154107.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_003154108.1 PFAM: alpha/beta hydrolase fold YP_003154109.1 PFAM: YhhN-like protein YP_003154110.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_003154111.1 PFAM: Domain of unknown function (DUF307) YP_003154112.1 PFAM: Flavin reductase like domain YP_003154113.1 PFAM: alpha/beta hydrolase fold YP_003154117.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_003154118.1 catalyzes the formation of L-proline from L-ornithine YP_003154119.1 PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: alpha-1,6-glucosidases, pullulanase-type YP_003154120.1 PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457) YP_003154121.1 PFAM: Glutaminase YP_003154123.1 PFAM: Acetyltransferase (GNAT) family YP_003154125.1 PFAM: Glycosyl transferase family 2 YP_003154127.1 PFAM: Bacterial regulatory proteins, gntR family YP_003154129.1 PFAM: Acetyltransferase (GNAT) family YP_003154131.1 PFAM: Prephenate dehydratase; ACT domain YP_003154132.1 PFAM: Domain of unknown function (DUF1905) YP_003154133.1 PFAM: Universal stress protein family YP_003154134.1 PFAM: Diacylglycerol kinase catalytic domain YP_003154135.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003154136.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_003154137.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family YP_003154138.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family YP_003154141.1 PFAM: Transposase YP_003154142.1 PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain YP_003154143.1 PFAM: HIT domain YP_003154147.1 PFAM: Bacterial regulatory proteins, gntR family YP_003154148.1 PFAM: ABC transporter YP_003154150.1 PFAM: Protein of unknown function (DUF1684) YP_003154151.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_003154152.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_003154153.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_003154154.1 PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; Phosphotransferase system, EIIC; TIGRFAM: PTS system, mannitol-specific IIC component YP_003154155.1 PFAM: SNARE associated Golgi protein YP_003154156.1 PFAM: Antibiotic biosynthesis monooxygenase YP_003154157.1 PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic YP_003154158.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity YP_003154159.1 PFAM: 'Cold-shock' DNA-binding domain YP_003154161.1 PFAM: Protein of unknown function (DUF1222) YP_003154162.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_003154163.1 PFAM: BioY family YP_003154164.1 PFAM: DUF218 domain YP_003154165.1 PFAM: CAAX amino terminal protease family YP_003154167.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_003154169.1 PFAM: Ion channel; TrkA-C domain; TrkA-N domain YP_003154170.1 PFAM: AhpC/TSA family YP_003154171.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_003154172.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; ectoine/hydroxyectoine ABC transporter solute-binding protein YP_003154173.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC YP_003154174.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuD; amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_003154175.1 PFAM: ABC transporter YP_003154176.1 PFAM: Phosphoenolpyruvate carboxylase YP_003154177.1 PFAM: Aldo/keto reductase family YP_003154178.1 PFAM: Acetyltransferase (GNAT) family YP_003154179.1 PFAM: Uncharacterized conserved protein (DUF2183) YP_003154180.1 PFAM: Acetyltransferase (GNAT) family YP_003154181.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_003154183.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_003154185.1 PFAM: Phosphate transporter family YP_003154190.1 PFAM: ROK family YP_003154191.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154192.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154193.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154194.1 PFAM: Melibiase YP_003154195.1 PFAM: Aminotransferase class I and II YP_003154196.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_003154197.1 PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region YP_003154198.1 PFAM: Domain of unknown function (DUF404); Bacterial domain of unknown function (DUF403) YP_003154199.1 PFAM: Protein of unknown function DUF124 YP_003154200.1 PFAM: Protein kinase domain YP_003154203.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_003154206.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_003154207.1 PFAM: Cobalt transport protein YP_003154208.1 PFAM: ABC transporter YP_003154209.1 PFAM: Protein of unknown function (DUF1393) YP_003154210.1 PFAM: Protein of unknown function DUF62 YP_003154211.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_003154212.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_003154213.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_003154214.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_003154215.1 PFAM: Luciferase-like monooxygenase YP_003154216.1 PFAM: Luciferase-like monooxygenase YP_003154217.1 PFAM: HIT domain YP_003154218.1 PFAM: P-loop ATPase protein family YP_003154220.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_003154221.1 PFAM: Bacterial regulatory protein, arsR family YP_003154222.1 PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain YP_003154223.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003154224.1 PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_003154225.1 PFAM: Methyltransferase domain YP_003154226.1 PFAM: Acetyltransferase (GNAT) family YP_003154227.1 PFAM: Bacterial regulatory proteins, gntR family YP_003154228.1 PFAM: ABC transporter YP_003154230.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_003154231.1 PFAM: RNase H YP_003154233.1 PFAM: Protein of unknown function (DUF405); Protein of unknown function (DUF418) YP_003154235.1 PFAM: His Kinase A (phosphoacceptor) domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003154236.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_003154238.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit YP_003154240.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_003154241.1 PFAM: RDD family YP_003154243.1 PFAM: Protein of unknown function (DUF1349) YP_003154244.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_003154245.1 PFAM: ROK family YP_003154246.1 PFAM: Major Facilitator Superfamily YP_003154247.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_003154248.1 PFAM: Protein of unknown function (DUF1112) YP_003154249.1 PFAM: Phospholipase D Active site motif YP_003154252.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_003154253.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_003154254.1 PFAM: Prolyl oligopeptidase family; Prolyl oligopeptidase, N-terminal beta-propeller domain YP_003154255.1 PFAM: alpha/beta hydrolase fold YP_003154256.1 PFAM: Predicted membrane protein (DUF2079) YP_003154257.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; allantoinase YP_003154258.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_003154259.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate YP_003154260.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase YP_003154261.1 PFAM: Xylose isomerase-like TIM barrel YP_003154262.1 PFAM: Cupin domain; Protein of unknown function (DUF861); TIGRFAM: putative allantoin catabolism protein YP_003154264.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle YP_003154265.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_003154266.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_003154267.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_003154268.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease YP_003154269.1 PFAM: Uricase; TIGRFAM: urate oxidase YP_003154270.1 PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase YP_003154271.1 PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase YP_003154272.1 PFAM: AhpC/TSA family YP_003154274.1 PFAM: BNR/Asp-box repeat; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154275.1 PFAM: Putative N-acetylmannosamine-6-phosphate epimerase YP_003154276.1 PFAM: ROK family YP_003154277.1 PFAM: Dihydrodipicolinate synthetase family YP_003154278.1 PFAM: ABC transporter YP_003154279.1 PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component; Oligopeptide/dipeptide transporter, C-terminal region YP_003154280.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154281.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154282.1 PFAM: FCD domain; Bacterial regulatory proteins, gntR family YP_003154284.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_003154286.1 PFAM: Protein of unknown function DUF58 YP_003154287.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_003154288.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_003154290.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154291.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154292.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154296.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_003154297.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); TIGRFAM: molybdenum cofactor synthesis domain YP_003154298.1 PFAM: ThiF family; MoeZ/MoeB domain YP_003154299.1 PFAM: ThiS family YP_003154300.1 PFAM: Radical SAM superfamily; Molybdenum Cofactor Synthesis C; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_003154301.1 PFAM: MoeA C-terminal region (domain IV); Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); TIGRFAM: molybdenum cofactor synthesis domain YP_003154302.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_003154303.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_003154304.1 PFAM: MoaE protein YP_003154305.1 PFAM: Calcineurin-like phosphoesterase YP_003154307.1 PFAM: Chaperonin 10 Kd subunit YP_003154308.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_003154310.1 PFAM: RNA pseudouridylate synthase YP_003154312.1 PFAM: Phosphate transporter family YP_003154313.1 PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_003154315.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_003154316.1 PFAM: Exonuclease YP_003154318.1 PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: IMP dehydrogenase family protein YP_003154319.1 PFAM: Heme oxygenase YP_003154320.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_003154321.1 PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase YP_003154324.1 PFAM: tRNA methyl transferase; GMP synthase C terminal domain; Glutamine amidotransferase class-I; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_003154325.1 PFAM: Major Facilitator Superfamily YP_003154327.1 PFAM: Acetyltransferase (GNAT) family YP_003154328.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_003154329.1 PFAM: Bacterial regulatory proteins, tetR family YP_003154331.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1 YP_003154332.1 PFAM: haloacid dehalogenase-like hydrolase YP_003154333.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_003154334.1 PFAM: Phosphotransferase enzyme family YP_003154336.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_003154338.1 PFAM: CutC family YP_003154340.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_003154341.1 PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_003154343.1 PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family YP_003154344.1 PFAM: alpha/beta hydrolase fold YP_003154348.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA YP_003154350.1 PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing YP_003154353.1 catalyzes the interconversion of succinyl-CoA and succinate YP_003154354.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_003154355.1 PFAM: Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, metal binding and dimerisation domain YP_003154356.1 PFAM: NlpC/P60 family YP_003154358.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB YP_003154359.1 PFAM: Methyltransferase domain YP_003154360.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: mycothione reductase YP_003154361.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_003154362.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_003154363.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_003154364.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic YP_003154365.1 PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_003154367.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_003154369.1 PFAM: Uncharacterized protein family UPF0007 YP_003154370.1 PFAM: CarD-like/TRCF domain YP_003154371.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154372.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_003154373.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003154374.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_003154376.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_003154377.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_003154378.1 PFAM: Rieske [2Fe-2S] domain YP_003154379.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_003154380.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_003154381.1 PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain YP_003154382.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase family hydrolase YP_003154383.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_003154384.1 PFAM: Major Facilitator Superfamily YP_003154385.1 PFAM: CarD-like/TRCF domain YP_003154386.1 PFAM: ABC transporter YP_003154388.1 PFAM: Methyltransferase domain YP_003154389.1 PFAM: Aminotransferase class I and II YP_003154390.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_003154391.1 PFAM: AlkA N-terminal domain; Metal binding domain of Ada; Bacterial regulatory helix-turn-helix proteins, AraC family YP_003154392.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases YP_003154393.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor YP_003154394.1 PFAM: RibD C-terminal domain YP_003154395.1 PFAM: Putative peptidoglycan binding domain; NlpC/P60 family YP_003154396.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_003154397.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_003154398.1 PFAM: C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_003154399.1 PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, alpha proteobacterial type YP_003154400.1 PFAM: Molybdopterin oxidoreductase Fe4S4 domain YP_003154401.1 PFAM: Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type YP_003154402.1 PFAM: 4Fe-4S binding domain YP_003154403.1 PFAM: Polysulphide reductase, NrfD YP_003154404.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein YP_003154405.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis YP_003154406.1 PFAM: Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; Elongation factor SelB, winged helix; TIGRFAM: small GTP-binding protein domain; selenocysteine-specific elongation factor SelB YP_003154408.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_003154409.1 PFAM: Calcineurin-like phosphoesterase YP_003154410.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_003154411.1 PFAM: Biotin/lipoate A/B protein ligase family YP_003154414.1 PFAM: ABC transporter YP_003154415.1 PFAM: Protein of unknown function (DUF990) YP_003154416.1 PFAM: Protein of unknown function (DUF990) YP_003154417.1 PFAM: Sodium:dicarboxylate symporter family YP_003154418.1 PFAM: Bacterial regulatory protein, arsR family YP_003154419.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_003154420.1 PFAM: short chain dehydrogenase YP_003154421.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_003154423.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_003154425.1 PFAM: Anticodon-binding domain; tRNA synthetases class I (I, L, M and V); TIGRFAM: isoleucyl-tRNA synthetase YP_003154429.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_003154431.1 PFAM: Nucleoside diphosphate kinase YP_003154433.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_003154434.1 PFAM: Amidohydrolase family YP_003154435.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_003154438.1 PFAM: RimM N-terminal domain; PRC-barrel domain; TIGRFAM: 16S rRNA processing protein RimM YP_003154439.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_003154440.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_003154441.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_003154442.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_003154443.1 PFAM: Ribonuclease HII YP_003154444.1 PFAM: Protein of unknown function (DUF2469) YP_003154445.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252 YP_003154446.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_003154447.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_003154448.1 PFAM: Phage integrase family; Phage integrase, N-terminal SAM-like domain YP_003154449.1 PFAM: Peptidase family M23 YP_003154450.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_003154451.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_003154452.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_003154453.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_003154454.1 PFAM: Cytidylyltransferase family YP_003154455.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_003154458.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003154459.1 PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP YP_003154460.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_003154461.1 PFAM: Acetyltransferase (GNAT) family YP_003154462.1 PFAM: Methyltransferase domain YP_003154465.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_003154467.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_003154468.1 PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA YP_003154469.1 PFAM: Protein of unknown function (DUF448) YP_003154470.1 PFAM: Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; Translation initiation factor IF-2, N-terminal region; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein domain YP_003154471.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_003154472.1 PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_003154473.1 PFAM: Ykud domain YP_003154474.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_003154475.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_003154476.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: guanosine pentaphosphate synthetase I/polynucleotide phosphorylase YP_003154477.1 PFAM: Insulinase (Peptidase family M16); Peptidase M16 inactive domain YP_003154478.1 PFAM: Dihydrodipicolinate reductase, C-terminus; Dihydrodipicolinate reductase, N-terminus; TIGRFAM: dihydrodipicolinate reductase YP_003154480.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_003154481.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_003154482.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_003154483.1 PFAM: Glutamine amidotransferases class-II; F420-0:Gamma-glutamyl ligase; Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_003154484.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_003154485.1 PFAM: RNA-metabolising metallo-beta-lactamase; Metallo-beta-lactamase superfamily; TIGRFAM: conserved hypothetical protein YP_003154486.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_003154487.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003154488.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_003154489.1 PFAM: Helix-turn-helix YP_003154491.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_003154492.1 PFAM: RecX family YP_003154493.1 PFAM: Uncharacterized protein family UPF0004; Radical SAM superfamily; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB YP_003154495.1 PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA) YP_003154496.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_003154497.1 PFAM: Methyltransferase small domain YP_003154498.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain; GTP-binding proten HflX YP_003154499.1 PFAM: DEAD/DEAH box helicase YP_003154500.1 PFAM: Peptidase S24-like; LexA DNA binding domain; TIGRFAM: SOS regulatory protein LexA YP_003154501.1 PFAM: LysM domain YP_003154502.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_003154504.1 PFAM: Protein of unknown function DUF75 YP_003154505.1 PFAM: 'Cold-shock' DNA-binding domain YP_003154508.1 PFAM: impB/mucB/samB family YP_003154510.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_003154511.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_003154513.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_003154514.1 PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases YP_003154515.1 PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_003154516.1 PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_003154517.1 PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_003154518.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_003154519.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_003154520.1 PFAM: Mur ligase middle domain; Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_003154521.1 PFAM: POTRA domain, FtsQ-type YP_003154522.1 PFAM: Tubulin/FtsZ family, GTPase domain; Tubulin/FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_003154523.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726 YP_003154524.1 PFAM: Protein of unknown function (DUF552) YP_003154525.1 PFAM: YGGT family YP_003154526.1 PFAM: DivIVA protein YP_003154527.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_003154528.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_003154529.1 PFAM: Acetyltransferase (GNAT) family YP_003154532.1 PFAM: Glycosyl hydrolases family 38 N-terminal domain; Glycosyl hydrolases family 38 C-terminal domain; Alpha mannosidase, middle domain YP_003154533.1 PFAM: Bacterial extracellular solute-binding protein YP_003154534.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154535.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154537.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase YP_003154538.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_003154539.1 PFAM: Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain YP_003154540.1 PFAM: Phosphofructokinase; ATP-NAD kinase; TIGRFAM: phosphofructokinase YP_003154541.1 PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter YP_003154542.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_003154543.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_003154544.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154545.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154546.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_003154547.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; GTP-binding protein TypA/BipA YP_003154549.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003154550.1 PFAM: 4Fe-4S binding domain YP_003154551.1 PFAM: Aminotransferase class I and II YP_003154552.1 PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_003154557.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: succinyl-diaminopimelate desuccinylase YP_003154558.1 PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 2; conserved hypothetical protein, DprA/Smf-related, family 1 YP_003154561.1 PFAM: Methyltransferase domain YP_003154562.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB YP_003154563.1 PFAM: Domain of unknown function DUF59; ParA/MinD ATPase like YP_003154564.1 PFAM: Protein of unknown function (DUF1003) YP_003154565.1 PFAM: CBS domain pair; MgtE intracellular N domain YP_003154566.1 PFAM: Aminopeptidase P, N-terminal domain; metallopeptidase family M24 YP_003154567.1 PFAM: PHP domain YP_003154568.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_003154569.1 PFAM: Calcineurin-like phosphoesterase YP_003154571.1 PFAM: Bacterial regulatory proteins, tetR family YP_003154572.1 PFAM: UvrD/REP helicase YP_003154573.1 PFAM: UvrD/REP helicase YP_003154574.1 PFAM: Phosphotransferase enzyme family YP_003154575.1 PFAM: NADH pyrophosphatase-like rudimentary NUDIX domain; NUDIX domain; NADH pyrophosphatase zinc ribbon domain YP_003154576.1 PFAM: UvrD/REP helicase; HRDC domain YP_003154577.1 PFAM: Transcription factor WhiB; AT hook motif YP_003154579.1 PFAM: Protein of unknown function DUF45 YP_003154580.1 PFAM: NUDIX domain YP_003154581.1 PFAM: Uncharacterised conserved protein (DUF2342) YP_003154582.1 PFAM: PDZ domain (Also known as DHR or GLGF) YP_003154583.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_003154584.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_003154586.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases YP_003154587.1 PFAM: Bacterial extracellular solute-binding protein YP_003154588.1 PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II YP_003154589.1 PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051 YP_003154590.1 PFAM: Bacterial-like globin YP_003154591.1 PFAM: Mechanosensitive ion channel YP_003154592.1 PFAM: Peptidase family M1; TIGRFAM: aminopeptidase N, Streptomyces lividans type YP_003154593.1 PFAM: Protein of unknown function (DUF402) YP_003154594.1 PFAM: Fatty acid desaturase YP_003154595.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_003154596.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003154597.1 PFAM: Protein kinase domain YP_003154599.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_003154600.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_003154602.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_003154603.1 PFAM: Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase H2TH domain YP_003154604.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003154605.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680) YP_003154606.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_003154607.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily YP_003154609.1 PFAM: Acetyltransferase (GNAT) family YP_003154610.1 PFAM: Ankyrin repeat YP_003154611.1 PFAM: Cobalt transport protein; ABC transporter YP_003154612.1 PFAM: ABC-type cobalt transport system, permease component YP_003154614.1 PFAM: Peptidase family M13; Peptidase family M13 YP_003154616.1 PFAM: ADP-ribosylglycohydrolase YP_003154617.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_003154618.1 PFAM: GlcNAc-PI de-N-acetylase YP_003154619.1 PFAM: Glycosyl transferases group 1 YP_003154620.1 PFAM: Methyltransferase domain YP_003154621.1 PFAM: Transposase IS116/IS110/IS902 family YP_003154622.1 PFAM: Integrase core domain YP_003154623.1 PFAM: HNH endonuclease YP_003154624.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003154625.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003154627.1 PFAM: Bacterial regulatory protein, arsR family YP_003154629.1 PFAM: NAD dependent epimerase/dehydratase family YP_003154630.1 PFAM: Bacterial regulatory proteins, tetR family YP_003154632.1 PFAM: Methyltransferase domain YP_003154633.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_003154634.1 PFAM: FMN-dependent dehydrogenase YP_003154635.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_003154636.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate YP_003154637.1 PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase YP_003154638.1 PFAM: MmgE/PrpD family YP_003154639.1 PFAM: FCD domain; Bacterial regulatory proteins, gntR family YP_003154643.1 PFAM: Acetyltransferase (GNAT) family YP_003154644.1 PFAM: HIT domain YP_003154645.1 PFAM: Putative regulatory protein (CxxC_CxxC_SSSS); TIGRFAM: putative regulatory protein, FmdB family YP_003154646.1 PFAM: Acetamidase/Formamidase family YP_003154648.1 PFAM: Protein of unknown function (DUF419) YP_003154649.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_003154650.1 PFAM: GrpE YP_003154651.1 PFAM: DnaJ domain; DnaJ C terminal region YP_003154652.1 PFAM: MerR family regulatory protein YP_003154653.1 PFAM: Glycosyl transferases group 1 YP_003154654.1 PFAM: SNARE associated Golgi protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154655.1 PFAM: Glycosyl transferases group 1 YP_003154656.1 PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481 YP_003154659.1 PFAM: Alpha amylase, catalytic domain YP_003154660.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154661.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154662.1 PFAM: Bacterial extracellular solute-binding protein YP_003154663.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_003154664.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_003154665.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_003154666.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_003154667.1 PFAM: Sir2 family YP_003154668.1 PFAM: Aldo/keto reductase family YP_003154669.1 PFAM: Amidinotransferase YP_003154670.1 PFAM: Acetyltransferase (GNAT) family YP_003154671.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_003154672.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_003154673.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_003154675.1 PFAM: Glycosyl transferases group 1 YP_003154676.1 PFAM: Glutamine amidotransferase class-I YP_003154678.1 PFAM: Major Facilitator Superfamily YP_003154679.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_003154680.1 PFAM: Protein of unknown function (DUF952) YP_003154682.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_003154683.1 PFAM: Amidase YP_003154684.1 PFAM: S4 domain YP_003154686.1 PFAM: ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_003154688.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_003154689.1 PFAM: Membrane transport protein YP_003154690.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_003154691.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_003154692.1 PFAM: Serine dehydratase beta chain; Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form YP_003154693.1 PFAM: AMP-binding enzyme YP_003154694.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_003154696.1 PFAM: AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_003154698.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003154699.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003154700.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family YP_003154701.1 PFAM: Protein of unknown function (DUF1469) YP_003154702.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_003154703.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_003154704.1 PFAM: Uncharacterized BCR, YitT family COG1284 YP_003154706.1 PFAM: TOBE domain; ABC transporter YP_003154707.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_003154709.1 PFAM: Inorganic pyrophosphatase YP_003154710.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family YP_003154711.1 PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain YP_003154712.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_003154713.1 PFAM: FtsH Extracellular; ATPase family associated with various cellular activities (AAA); Peptidase family M41; TIGRFAM: ATP-dependent metalloprotease FtsH YP_003154714.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_003154715.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_003154716.1 PFAM: Dihydroneopterin aldolase; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: dihydroneopterin aldolase; FolB domain; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_003154718.1 PFAM: Bacterial membrane flanked domain YP_003154719.1 PFAM: Bacterial membrane flanked domain YP_003154720.1 PFAM: Domain of unknown function (DUF2520); Rossmann-like domain YP_003154721.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: cytidyltransferase-related domain; pantoate--beta-alanine ligase YP_003154722.1 PFAM: OB-fold nucleic acid binding domain; tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_003154725.1 PFAM: Aldose 1-epimerase YP_003154726.1 PFAM: Uncharacterised ACR, YkgG family COG1556 YP_003154727.1 PFAM: Uncharacterised ACR, YkgG family COG1556; 4Fe-4S binding domain; TIGRFAM: 2[4Fe-4S] protein, putative YP_003154728.1 PFAM: Cysteine-rich domain YP_003154729.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_003154730.1 PFAM: Protein of unknown function, DUF624 YP_003154731.1 PFAM: Alpha-L-fucosidase YP_003154732.1 PFAM: Bacterial extracellular solute-binding protein YP_003154733.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154734.1 PFAM: Alpha-L-fucosidase YP_003154735.1 PFAM: FCD domain; Bacterial regulatory proteins, gntR family YP_003154736.1 PFAM: ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); Clp amino terminal domain YP_003154737.1 PFAM: SNARE associated Golgi protein YP_003154738.1 catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis YP_003154739.1 PFAM: Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase YP_003154740.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_003154741.1 PFAM: SAF domain YP_003154742.1 PFAM: Putative regulatory protein (CxxC_CxxC_SSSS); TIGRFAM: putative regulatory protein, FmdB family YP_003154743.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_003154744.1 PFAM: Acetyltransferase (GNAT) family YP_003154746.1 PFAM: Alanine racemase, N-terminal domain YP_003154747.1 PFAM: FAD binding domain; D-arabinono-1,4-lactone oxidase; TIGRFAM: FAD-linked oxidoreductase YP_003154748.1 PFAM: Inositol monophosphatase family YP_003154749.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003154750.1 PFAM: Glycosyl hydrolases family 6 YP_003154751.1 PFAM: alpha/beta hydrolase fold YP_003154752.1 PFAM: LysR substrate binding domain YP_003154753.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 YP_003154754.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_003154758.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_003154759.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: conserved hypothetical protein TIGR00096 YP_003154760.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_003154761.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_003154762.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_003154763.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_003154766.1 PFAM: ABC transporter YP_003154767.1 PFAM: MarR family YP_003154768.1 PFAM: Bacterial regulatory proteins, tetR family YP_003154769.1 PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_003154770.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_003154771.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_003154772.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_003154773.1 PFAM: DEAD/DEAH box helicase; CarD-like/TRCF domain; TRCF domain; Helicase conserved C-terminal domain; TIGRFAM: transcription-repair coupling factor (mfd) YP_003154774.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_003154775.1 PFAM: Enolase, C-terminal TIM barrel domain; Enolase, N-terminal domain; TIGRFAM: phosphopyruvate hydratase YP_003154776.1 PFAM: Septum formation initiator YP_003154777.1 PFAM: Protein of unknown function (DUF501) YP_003154778.1 PFAM: Ppx/GppA phosphatase family YP_003154779.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_003154780.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_003154781.1 PFAM: Permease family YP_003154782.1 PFAM: MarR family YP_003154783.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_003154784.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_003154785.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C terminal domain YP_003154786.1 PFAM: Bacterial extracellular solute-binding protein YP_003154787.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154788.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154789.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003154791.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily subfamily IIA hydrolase, TIGR01457 YP_003154792.1 PFAM: FtsJ-like methyltransferase; S4 domain; TIGRFAM: hemolysin TlyA family protein YP_003154793.1 PFAM: ATP-NAD kinase YP_003154794.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_003154795.1 PFAM: Thiamin pyrophosphokinase, catalytic domain YP_003154798.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_003154799.1 PFAM: Glycosyl transferases group 1 YP_003154800.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_003154801.1 PFAM: NUDIX domain YP_003154802.1 PFAM: 3'-5' exonuclease YP_003154804.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_003154805.1 PFAM: alpha/beta hydrolase fold YP_003154806.1 PFAM: RibD C-terminal domain YP_003154807.1 PFAM: AFG1-like ATPase YP_003154808.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose trehalohydrolase YP_003154809.1 PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase YP_003154810.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX YP_003154811.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_003154812.1 PFAM: HIT domain YP_003154814.1 PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033 YP_003154815.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_003154816.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_003154817.1 PFAM: ATPase family associated with various cellular activities (AAA); Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_003154818.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_003154819.1 TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_003154820.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family YP_003154821.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_003154822.1 PFAM: ACT domain; TGS domain; Region found in RelA / SpoT proteins; HD domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_003154824.1 PFAM: Domain of Unknown Function (DUF349) YP_003154825.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_003154826.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_003154827.1 PFAM: DbpA RNA binding domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain YP_003154828.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_003154830.1 PFAM: Peptidase family M20/M25/M40 YP_003154832.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_003154833.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome c oxidase, subunit II YP_003154834.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I YP_003154837.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_003154838.1 PFAM: Rieske [2Fe-2S] domain YP_003154839.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III YP_003154840.1 PFAM: Cytochrome c oxidase subunit III YP_003154841.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_003154842.1 PFAM: AsnC family YP_003154843.1 contains 3'-5'exonuclease domain YP_003154844.1 PFAM: AMP-binding enzyme YP_003154845.1 PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase) YP_003154848.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_003154849.1 PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II YP_003154850.1 PFAM: PASTA domain; Protein kinase domain YP_003154852.1 PFAM: Polyprenyl synthetase YP_003154854.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase YP_003154855.1 PFAM: Universal stress protein family YP_003154856.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 region 3; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_003154857.1 PFAM: Acetyltransferase (GNAT) family YP_003154859.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_003154860.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_003154862.1 PFAM: Aldose 1-epimerase YP_003154864.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller YP_003154865.1 PFAM: Acetyltransferase (GNAT) family; CoA binding domain YP_003154867.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_003154871.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_003154874.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase YP_003154875.1 PFAM: Aconitase family (aconitate hydratase); Aconitase C-terminal domain; TIGRFAM: aconitate hydratase 1 YP_003154876.1 PFAM: Transketolase, pyrimidine binding domain; Transketolase, C-terminal domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_003154877.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_003154878.1 PFAM: Cytochrome oxidase assembly protein YP_003154879.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_003154880.1 PFAM: ABC transporter YP_003154882.1 PFAM: HTH domain YP_003154883.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB YP_003154884.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1 YP_003154885.1 PFAM: Rieske [2Fe-2S] domain YP_003154886.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_003154887.1 PFAM: Domain of unknown function DUF59 YP_003154888.1 PFAM: Alanine dehydrogenase/PNT, N-terminal domain; Alanine dehydrogenase/PNT, C-terminal domain; TIGRFAM: alanine dehydrogenase YP_003154889.1 PFAM: ABC transporter YP_003154890.1 PFAM: MarR family YP_003154891.1 PFAM: Elongation factor P (EF-P) KOW-like domain; Elongation factor P, C-terminal; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_003154892.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_003154893.1 PFAM: Phosphoribosyl transferase domain YP_003154894.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_003154895.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_003154897.1 PFAM: Glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain, CPSase domain; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_003154898.1 PFAM: MGS-like domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_003154899.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_003154901.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_003154902.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_003154903.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_003154904.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_003154905.1 PFAM: Phosphoribosyl-AMP cyclohydrolase YP_003154906.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_003154907.1 PFAM: Tryptophan-associated transmembrane protein (Trp_oprn_chp); TIGRFAM: trp region conserved hypothetical membrane protein YP_003154910.1 PFAM: Indole-3-glycerol phosphate synthase YP_003154911.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_003154912.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_003154913.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_003154914.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_003154915.1 PFAM: Response regulator receiver domain; ANTAR domain YP_003154916.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154917.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_003154918.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I YP_003154919.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_003154920.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA YP_003154921.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_003154922.1 PFAM: Shikimate kinase YP_003154923.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_003154924.1 PFAM: Type I 3-dehydroquinase; TIGRFAM: 3-dehydroquinate dehydratase, type I YP_003154925.1 PFAM: UPF0126 domain YP_003154926.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_003154927.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_003154930.1 PFAM: NUDIX domain YP_003154932.1 PFAM: DNA polymerase family A YP_003154933.1 PFAM: Metallo-beta-lactamase superfamily YP_003154934.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_003154935.1 PFAM: UvrB/uvrC motif; Helix-hairpin-helix motif; GIY-YIG catalytic domain; UvrC Helix-hairpin-helix N-terminal; TIGRFAM: excinuclease ABC, C subunit YP_003154936.1 PFAM: P-loop ATPase protein family YP_003154937.1 PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related YP_003154938.1 PFAM: Sporulation Regulator WhiA N terminal; Sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein YP_003154939.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_003154940.1 PFAM: Phosphoglycerate kinase YP_003154941.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_003154942.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_003154943.1 PFAM: Glucose-6-phosphate dehydrogenase subunit; TIGRFAM: opcA protein; 6-phosphogluconolactonase YP_003154944.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_003154945.1 PFAM: Transaldolase; TIGRFAM: transaldolase, mycobacterial type YP_003154946.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_003154947.1 PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase YP_003154948.1 PFAM: Phage integrase family; Phage integrase, N-terminal SAM-like domain YP_003154949.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_003154950.1 PFAM: S4 domain; RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase family YP_003154951.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_003154952.1 PFAM: Cytidylate kinase; GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; cytidylate kinase; small GTP-binding protein domain; GTP-binding protein Era YP_003154953.1 PFAM: TM2 domain YP_003154955.1 PFAM: NUDIX domain YP_003154957.1 PFAM: Bacterial extracellular solute-binding protein YP_003154958.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154959.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003154960.1 PFAM: short chain dehydrogenase YP_003154961.1 PFAM: Formyl transferase; ACT domain; TIGRFAM: formyltetrahydrofolate deformylase YP_003154962.1 PFAM: MMPL family; TIGRFAM: Transport protein YP_003154963.1 PFAM: MarR family YP_003154964.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde YP_003154965.1 PFAM: Creatinase/Prolidase N-terminal domain; metallopeptidase family M24 YP_003154966.1 PFAM: Aldehyde dehydrogenase family YP_003154967.1 PFAM: Bacterial protein of unknown function (DUF881) YP_003154968.1 PFAM: Protein of unknown function (DUF1290) YP_003154969.1 PFAM: Bacterial protein of unknown function (DUF881) YP_003154970.1 PFAM: FHA domain YP_003154971.1 PFAM: MerR family regulatory protein YP_003154973.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_003154974.1 PFAM: Putative RNA methylase family UPF0020 YP_003154975.1 TIGRFAM: uncharacterized Actinobacterial protein TIGR03083; conserved hypothetical protein TIGR03085 YP_003154976.1 PFAM: Xylose isomerase-like TIM barrel; AP endonuclease family 2 C terminus YP_003154977.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003154978.1 PFAM: Transglutaminase-like superfamily YP_003154979.1 PFAM: Protein of unknown function DUF75 YP_003154980.1 PFAM: Domain of unknown function DUF81 YP_003154981.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_003154982.1 PFAM: Predicted permease YP_003154983.1 PFAM: ABC transporter YP_003154985.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein YP_003154986.1 PFAM: CAAX amino terminal protease family YP_003154987.1 PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein YP_003154988.1 PFAM: Glycosyl hydrolases family 25; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003154989.1 PFAM: Bacterial regulatory proteins, tetR family YP_003154990.1 PFAM: MMPL family YP_003154991.1 TIGRFAM: YhgE/Pip N-terminal domain; X-X-X-Leu-X-X-Gly heptad repeats; YhgE/Pip C-terminal domain YP_003154992.1 PFAM: Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_003154995.1 PFAM: HNH endonuclease YP_003154996.1 PFAM: Major Facilitator Superfamily YP_003154998.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_003154999.1 PFAM: Methyltransferase domain YP_003155000.1 PFAM: SpoU rRNA Methylase family YP_003155001.1 PFAM: ABC transporter YP_003155002.1 PFAM: RNB domain YP_003155004.1 PFAM: Glycosyl transferases group 1; TIGRFAM: glycogen synthase, Corynebacterium family YP_003155005.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_003155006.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphoserine phosphatase SerB; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_003155007.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA YP_003155008.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_003155012.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_003155014.1 PFAM: FxsA cytoplasmic membrane protein YP_003155015.1 PFAM: Glycosyl transferase family 2 YP_003155016.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_003155018.1 PFAM: DSHCT (NUC185) domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain YP_003155019.1 PFAM: Diacylglycerol kinase catalytic domain YP_003155020.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_003155021.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_003155024.1 PFAM: Protein of unknown function (DUF2581) YP_003155025.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_003155026.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphatase; phosphoribosyl-ATP pyrophosphohydrolase YP_003155027.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC YP_003155028.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_003155029.1 PFAM: NusB family; NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_003155030.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_003155031.1 TIGRFAM: primosomal protein N' YP_003155032.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_003155033.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_003155034.1 PFAM: Actinomycetales protein of unknown function, DUF275; Putative proteasome component YP_003155035.1 PFAM: Protein of unknown function (DUF797) YP_003155036.1 PFAM: Actinomycetales protein of unknown function, DUF275; Putative proteasome component YP_003155037.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_003155038.1 PFAM: Methyltransferase domain YP_003155039.1 PFAM: Peptidase family M50 YP_003155040.1 PFAM: Protein of unknown function DUF75 YP_003155041.1 PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; cysteinyl-tRNA synthetase YP_003155042.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_003155046.1 PFAM: SpoU rRNA Methylase family YP_003155047.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_003155049.1 PFAM: Shikimate / quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain YP_003155050.1 PFAM: Aminodeoxychorismate lyase; TIGRFAM: conserved hypothetical protein TIGR00247 YP_003155051.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250 YP_003155052.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003155053.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_003155054.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_003155055.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_003155058.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain YP_003155059.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_003155060.1 PFAM: e3 binding domain; 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase YP_003155062.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_003155063.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_003155065.1 PFAM: RDD family YP_003155066.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_003155067.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_003155069.1 PFAM: ABC transporter YP_003155070.1 PFAM: Bacterial regulatory proteins, tetR family YP_003155072.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme YP_003155073.1 PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I YP_003155076.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_003155078.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_003155079.1 PFAM: ROK family YP_003155080.1 PFAM: Protein of unknown function (DUF328) YP_003155081.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486 YP_003155082.1 PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family YP_003155083.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily YP_003155085.1 PFAM: Uncharacterised ACR, COG2135 YP_003155087.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_003155088.1 PFAM: Acyl transferase domain YP_003155089.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_003155090.1 carries the fatty acid chain in fatty acid biosynthesis YP_003155091.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2 YP_003155093.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_003155094.1 PFAM: OsmC-like protein YP_003155095.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003155107.1 PFAM: CHAD domain YP_003155108.1 PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; Toprim domain; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_003155109.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_003155110.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_003155111.1 PFAM: Luciferase-like monooxygenase YP_003155112.1 PFAM: ROK family YP_003155113.1 PFAM: Bacterial extracellular solute-binding protein YP_003155114.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155115.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155116.1 PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain YP_003155118.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003155119.1 PFAM: Periplasmic solute binding protein family YP_003155120.1 PFAM: ABC transporter YP_003155121.1 PFAM: ABC 3 transport family YP_003155122.1 PFAM: Ferric uptake regulator family YP_003155124.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_003155125.1 PFAM: Recombination protein O; TIGRFAM: DNA repair protein RecO YP_003155127.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_003155128.1 PFAM: Methyltransferase domain YP_003155129.1 PFAM: Peptidase family M28 YP_003155130.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_003155131.1 PFAM: Integral membrane protein DUF6 YP_003155132.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type YP_003155133.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain; GTP-binding protein Era YP_003155134.1 PFAM: Transporter associated domain; CBS domain pair YP_003155135.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043 YP_003155136.1 PFAM: PhoH-like protein YP_003155137.1 PFAM: HIT domain YP_003155138.1 PFAM: NADPH-dependent FMN reductase YP_003155139.1 PFAM: RNA methyltransferase; TIGRFAM: conserved hypothetical protein TIGR00046 YP_003155140.1 PFAM: DnaJ domain; DnaJ C terminal region; DnaJ central domain (4 repeats); TIGRFAM: chaperone protein DnaJ YP_003155141.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_003155144.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_003155145.1 PFAM: MOSC domain YP_003155146.1 PFAM: Elongation factor G C-terminus; GTP-binding protein LepA C-terminus; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_003155147.1 PFAM: Bacterial domain of unknown function (DUF403) YP_003155148.1 PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407) YP_003155150.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_003155151.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_003155152.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_003155153.1 PFAM: SLBB domain; Helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_003155154.1 PFAM: Vitamin K epoxide reductase family YP_003155155.1 PFAM: NAD dependent epimerase/dehydratase family YP_003155156.1 PFAM: AMP-binding enzyme YP_003155157.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_003155158.1 PFAM: Xylose isomerase-like TIM barrel YP_003155159.1 PFAM: Acetyltransferase (GNAT) family YP_003155160.1 PFAM: Thymidine kinase YP_003155162.1 PFAM: Aldehyde dehydrogenase family; Proline dehydrogenase YP_003155163.1 PFAM: Acyltransferase family YP_003155164.1 PFAM: UTP--glucose-1-phosphate uridylyltransferase YP_003155165.1 PFAM: ABC transporter YP_003155166.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_003155167.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_003155168.1 PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family YP_003155169.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_003155170.1 PFAM: GlcNAc-PI de-N-acetylase YP_003155171.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_003155172.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_003155173.1 PFAM: Siderophore-interacting FAD-binding domain; Siderophore-interacting protein YP_003155174.1 PFAM: FAD dependent oxidoreductase YP_003155175.1 PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial YP_003155177.1 PFAM: Sodium/hydrogen exchanger family YP_003155178.1 PFAM: HNH endonuclease YP_003155179.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Helix-turn-helix; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003155180.1 PFAM: Domain of unknown function DUF81 YP_003155181.1 PFAM: Bacterial regulatory proteins, tetR family YP_003155182.1 PFAM: ABC transporter YP_003155183.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_003155184.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155185.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155186.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003155188.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; uncharacterized peroxidase-related enzyme YP_003155189.1 PFAM: Bacterial regulatory proteins, lacI family YP_003155190.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_003155191.1 PFAM: Protein of unknown function (DUF1037) YP_003155192.1 PFAM: Domain of unknown function (DUF1846) YP_003155194.1 PFAM: Domain of Unknown Function (DUF1535) YP_003155196.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003155197.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155198.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155199.1 PFAM: Bacterial extracellular solute-binding protein YP_003155200.1 PFAM: Glycosyl hydrolases family 32 N terminal YP_003155201.1 PFAM: Acetyltransferase (GNAT) family YP_003155202.1 PFAM: Bacterial regulatory proteins, tetR family YP_003155203.1 PFAM: alpha/beta hydrolase fold YP_003155204.1 PFAM: TM2 domain YP_003155205.1 PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; drug resistance transporter, EmrB/QacA subfamily YP_003155207.1 PFAM: HRDC domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase; RQC domain; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ YP_003155209.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003155211.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_003155212.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155213.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155214.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_003155216.1 PFAM: DoxX YP_003155217.1 PFAM: Protein of unknown function DUF88 YP_003155218.1 PFAM: Cupin domain YP_003155219.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_003155220.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_003155221.1 PFAM: TOBE domain; MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family; molybdenum-pterin binding domain YP_003155222.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_003155223.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: NifC-like ABC-type porter; molybdate ABC transporter, permease protein YP_003155224.1 PFAM: ABC transporter; TOBE domain YP_003155225.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_003155226.1 PFAM: HhH-GPD superfamily base excision DNA repair protein YP_003155227.1 PFAM: Phosphoglycerate mutase family YP_003155228.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein YP_003155230.1 PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase YP_003155232.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_003155233.1 PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase YP_003155234.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_003155235.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_003155236.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_003155237.1 PFAM: S1 RNA binding domain; Ribonuclease E/G family; TIGRFAM: ribonuclease, Rne/Rng family YP_003155238.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_003155239.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_003155240.1 PFAM: ABC transporter; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YP_003155241.1 PFAM: ABC transporter; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YP_003155242.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003155243.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003155244.1 PFAM: Zinc finger found in FPG and IleRS; Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_003155245.1 PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial YP_003155246.1 PFAM: Uncharacterized ACR, COG1399 YP_003155247.1 PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; pantetheine-phosphate adenylyltransferase, bacterial YP_003155249.1 PFAM: Acetyltransferase (GNAT) family YP_003155251.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: putative methyltransferase YP_003155252.1 PFAM: DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase RecG YP_003155253.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_003155254.1 PFAM: Peptidase family S51 YP_003155256.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_003155257.1 PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_003155259.1 PFAM: D-ala D-ala ligase N-terminus; ATP-grasp domain; TIGRFAM: D-alanine--D-alanine ligase YP_003155260.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NADP oxidoreductase coenzyme F420-dependent YP_003155261.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_003155263.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_003155264.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_003155265.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_003155266.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_003155267.1 PFAM: Universal stress protein family YP_003155268.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_003155269.1 PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family YP_003155271.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2199) YP_003155272.1 PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain YP_003155275.1 PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit YP_003155276.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone YP_003155277.1 TIGRFAM: nitrate reductase, beta subunit YP_003155278.1 PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit YP_003155279.1 PFAM: Major Facilitator Superfamily; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_003155280.1 PFAM: ACT domain YP_003155281.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein YP_003155282.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II YP_003155283.1 PFAM: Isocitrate/isopropylmalate dehydrogenase YP_003155284.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_003155285.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_003155286.1 PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit YP_003155287.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_003155288.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; BFD-like [2Fe-2S] binding domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit YP_003155289.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_003155290.1 PFAM: CbiX; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase YP_003155291.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_003155292.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_003155293.1 PFAM: PET112 family, C terminal region; PET112 family, N terminal region; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit YP_003155294.1 PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit YP_003155295.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit YP_003155296.1 PFAM: Acetyltransferase (GNAT) family YP_003155298.1 PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase, RecQ family YP_003155299.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase adenylation domain; TIGRFAM: DNA ligase, NAD-dependent YP_003155301.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_003155302.1 PFAM: Aminotransferase class-V YP_003155304.1 PFAM: von Willebrand factor type A domain YP_003155305.1 PFAM: von Willebrand factor type A domain YP_003155307.1 PFAM: Protein of unknown function DUF58 YP_003155308.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_003155309.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX YP_003155310.1 PFAM: Alpha amylase, catalytic domain YP_003155311.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase YP_003155315.1 PFAM: Protein of unknown function DUF91 YP_003155316.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_003155317.1 PFAM: Protein of unknown function (DUF2550) YP_003155318.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain YP_003155319.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, beta-barrel domain; TIGRFAM: ATP synthase, F1 beta subunit YP_003155320.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_003155321.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_003155322.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_003155323.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_003155324.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_003155325.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_003155327.1 PFAM: Glycosyl transferase family 4 YP_003155328.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_003155329.1 PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; HemK family putative methylases YP_003155330.1 PFAM: RF-1 domain; PCRF domain; TIGRFAM: peptide chain release factor 1 YP_003155331.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_003155332.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003155333.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; Aldo/keto reductase family YP_003155334.1 PFAM: Bacterial extracellular solute-binding protein YP_003155335.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155336.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155337.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho YP_003155338.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase YP_003155339.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_003155340.1 PFAM: ACT domain; Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase YP_003155341.1 PFAM: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: diaminopimelate decarboxylase YP_003155342.1 PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB YP_003155343.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_003155344.1 PFAM: Peptidase family M23 YP_003155345.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_003155346.1 PFAM: His Kinase A (phosphoacceptor) domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003155347.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth YP_003155349.1 TIGRFAM: anti-sigma factor, TIGR02949 family YP_003155350.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family YP_003155352.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_003155353.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; GTP-binding conserved hypothetical protein YP_003155354.1 PFAM: Inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family YP_003155355.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate YP_003155356.1 PFAM: Calpain family cysteine protease YP_003155357.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_003155358.1 PFAM: Uncharacterised protein family (UPF0182) YP_003155360.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_003155361.1 PFAM: Iron/manganese superoxide dismutases, C-terminal domain; Iron/manganese superoxide dismutases, alpha-hairpin domain YP_003155362.1 PFAM: DEAD/DEAH box helicase; DEAD/H associated; Helicase conserved C-terminal domain YP_003155363.1 PFAM: Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase H2TH domain YP_003155365.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); Exonuclease YP_003155366.1 PFAM: ABC transporter YP_003155367.1 PFAM: FCD domain; Bacterial regulatory proteins, gntR family YP_003155368.1 PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106 YP_003155369.1 TIGRFAM: diaminopimelate dehydrogenase YP_003155370.1 PFAM: Aminomethyltransferase folate-binding domain; FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form YP_003155371.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_003155372.1 PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain YP_003155373.1 PFAM: Methylenetetrahydrofolate reductase YP_003155374.1 PFAM: Region found in RelA / SpoT proteins YP_003155375.1 PFAM: NAD dependent epimerase/dehydratase family YP_003155377.1 PFAM: Cytochrome P450 YP_003155378.1 PFAM: Protein of unknown function (DUF1503); TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_003155379.1 PFAM: Heavy-metal-associated domain YP_003155381.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; Heavy-metal-associated domain; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-(or silver)-translocating P-type ATPase YP_003155382.1 PFAM: Uncharacterised BCR, COG1937 YP_003155383.1 PFAM: Bacterial regulatory proteins, tetR family YP_003155384.1 PFAM: Isochorismatase family YP_003155385.1 PFAM: short chain dehydrogenase YP_003155386.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_003155387.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_003155388.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_003155389.1 PFAM: ANTAR domain YP_003155390.1 PFAM: Bacterial regulatory proteins, tetR family YP_003155391.1 PFAM: ABC transporter YP_003155392.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase YP_003155393.1 PFAM: Bacterial regulatory proteins, tetR family YP_003155394.1 PFAM: Acetyltransferase (GNAT) family YP_003155395.1 PFAM: NAD dependent epimerase/dehydratase family YP_003155396.1 PFAM: Acetyltransferase (GNAT) family YP_003155399.1 PFAM: short chain dehydrogenase YP_003155400.1 PFAM: Phosphoglycerate mutase family YP_003155402.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_003155403.1 PFAM: 3' exoribonuclease family, domain 2; 3' exoribonuclease family, domain 1; TIGRFAM: ribonuclease PH YP_003155404.1 PFAM: Metallo-beta-lactamase superfamily YP_003155405.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_003155406.1 PFAM: Domain of unknown function (DUF2017) YP_003155407.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_003155408.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase YP_003155409.1 PFAM: Type III restriction enzyme, res subunit YP_003155412.1 PFAM: Beta-lactamase YP_003155413.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_003155414.1 PFAM: Binding-protein-dependent transport system inner membrane component; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_003155415.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155416.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_003155417.1 PFAM: Acetyltransferase (GNAT) family YP_003155418.1 PFAM: Protein of unknown function (DUF1343) YP_003155419.1 PFAM: Malic enzyme, N-terminal domain; Malic enzyme, NAD binding domain YP_003155420.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003155421.1 PFAM: Domain of unknown function (DUF1605); Helicase associated domain (HA2); Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent helicase HrpA YP_003155422.1 PFAM: Phosphotransferase enzyme family YP_003155423.1 PFAM: Phosphotransferase enzyme family YP_003155424.1 PFAM: Xylose isomerase-like TIM barrel YP_003155425.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C terminal domain YP_003155427.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_003155428.1 PFAM: Peptidase family M23 YP_003155429.1 PFAM: Predicted permease YP_003155430.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE YP_003155431.1 PFAM: RF-1 domain; PCRF domain; TIGRFAM: peptide chain release factor 2 YP_003155432.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_003155437.1 PFAM: Bacterial type II secretion system protein F domain YP_003155438.1 PFAM: Bacterial type II secretion system protein F domain YP_003155439.1 PFAM: Type II/IV secretion system protein YP_003155440.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_003155441.1 PFAM: Uncharacterised ACR, COG2135 YP_003155442.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003155443.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003155444.1 PFAM: ABC transporter YP_003155445.1 PFAM: Predicted permease YP_003155447.1 PFAM: Transcription factor WhiB YP_003155448.1 PFAM: PAS fold; Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003155449.1 PFAM: Protein of unknown function (DUF2505) YP_003155452.1 PFAM: SAF domain YP_003155453.1 TIGRFAM: DNA binding domain, excisionase family YP_003155455.1 PFAM: LysM domain YP_003155457.1 PFAM: SecA DEAD-like domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_003155458.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_003155459.1 PFAM: Phosphoribosyl transferase domain YP_003155460.1 PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination YP_003155461.1 PFAM: His Kinase A (phosphoacceptor) domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003155462.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_003155463.1 PFAM: Membrane domain of glycerophosphoryl diester phosphodiesterase YP_003155466.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_003155467.1 PFAM: Protein of unknown function DUF58 YP_003155468.1 PFAM: Phosphotransferase enzyme family YP_003155469.1 PFAM: Integral membrane protein DUF95 YP_003155470.1 PFAM: RDD family YP_003155471.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain YP_003155473.1 PFAM: Domain of unknown function (DUF1025) YP_003155476.1 PFAM: Transcription factor WhiB YP_003155477.1 PFAM: F420-0:Gamma-glutamyl ligase; TIGRFAM: F420-dependent oxidoreductase, putative YP_003155478.1 TIGRFAM: conserved hypothetical protein TIGR03089 YP_003155479.1 PFAM: ABC transporter YP_003155480.1 PFAM: ABC-2 type transporter YP_003155482.1 PFAM: UDP-galactopyranose mutase; FAD dependent oxidoreductase; TIGRFAM: UDP-galactopyranose mutase YP_003155483.1 PFAM: Glycosyl transferase family 2 YP_003155484.1 PFAM: Glycosyl transferase family 2 YP_003155485.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_003155486.1 PFAM: Glycosyl transferase family 2 YP_003155487.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_003155489.1 PFAM: Acyltransferase family YP_003155490.1 TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_003155491.1 PFAM: Glycosyl transferases group 1 YP_003155492.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_003155496.1 PFAM: Glycosyl transferases group 1 YP_003155497.1 PFAM: Polysaccharide biosynthesis protein YP_003155498.1 PFAM: Asparagine synthase YP_003155499.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003155500.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_003155501.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_003155502.1 PFAM: Acyltransferase family YP_003155503.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_003155504.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_003155505.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003155506.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_003155507.1 PFAM: Adenylate and Guanylate cyclase catalytic domain YP_003155508.1 PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_003155509.1 PFAM: Carboxyl transferase domain YP_003155511.1 PFAM: Bacterial protein of unknown function (DUF885) YP_003155512.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_003155513.1 PFAM: Carbamoyl-phosphate synthase L chain, N-terminal domain; ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin-requiring enzyme YP_003155514.1 catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity YP_003155515.1 PFAM: Phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleotide phosphorylase YP_003155516.1 PFAM: Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_003155517.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_003155518.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_003155519.1 PFAM: NUDIX domain YP_003155520.1 PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; Glycosyl transferase family, a/b domain; TIGRFAM: pyrimidine-nucleoside phosphorylase YP_003155521.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_003155522.1 PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_003155523.1 PFAM: Branched-chain amino acid transport system / permease component YP_003155524.1 PFAM: ABC transporter YP_003155525.1 PFAM: Basic membrane protein YP_003155526.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase YP_003155527.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_003155528.1 PFAM: Succinate dehydrogenase cytochrome b subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_003155530.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain; FAD dependent oxidoreductase; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup YP_003155531.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003155532.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III YP_003155533.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_003155534.1 PFAM: Beta-eliminating lyase YP_003155535.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_003155536.1 PFAM: MaoC like domain YP_003155538.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_003155539.1 PFAM: Protein of unknown function (DUF520) YP_003155546.1 PFAM: FtsK/SpoIIIE family; FHA domain YP_003155548.1 PFAM: Protein kinase domain YP_003155549.1 PFAM: FHA domain YP_003155550.1 PFAM: Protein phosphatase 2C YP_003155551.1 PFAM: FHA domain; RDD family YP_003155552.1 PFAM: Transglutaminase-like superfamily YP_003155553.1 PFAM: Protein of unknown function DUF58 YP_003155554.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_003155555.1 PFAM: Fibronectin type III domain YP_003155556.1 PFAM: Polyprenyl synthetase YP_003155557.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_003155558.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_003155559.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_003155560.1 PFAM: Arginine repressor, DNA binding domain; Arginine repressor, C-terminal domain; TIGRFAM: arginine repressor YP_003155561.1 PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; TIGRFAM: ornithine carbamoyltransferase YP_003155562.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases YP_003155563.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_003155564.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_003155565.1 PFAM: Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_003155566.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155567.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155568.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_003155569.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_003155570.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_003155572.1 PFAM: Glycosyl hydrolases family 18 YP_003155573.1 PFAM: Glycosyl hydrolase family 20, catalytic domain YP_003155575.1 PFAM: B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_003155576.1 PFAM: Aminoacyl tRNA synthetase class II, N-terminal domain; tRNA synthetases class II core domain (F); TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_003155577.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain; Metallo-beta-lactamase superfamily; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase YP_003155578.1 PFAM: Copper resistance protein D; Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) YP_003155579.1 PFAM: RNA 2'-O ribose methyltransferase substrate binding; SpoU rRNA Methylase family YP_003155580.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_003155581.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_003155582.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_003155586.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis YP_003155588.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_003155590.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_003155591.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_003155593.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_003155594.1 PFAM: ZIP Zinc transporter YP_003155596.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type YP_003155597.1 PFAM: alpha/beta hydrolase fold YP_003155598.1 PFAM: Domain of unknown function DUF81 YP_003155599.1 PFAM: Aldo/keto reductase family YP_003155603.1 PFAM: Transposase YP_003155604.1 PFAM: Transposase YP_003155605.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; Globin YP_003155606.1 PFAM: Protein of unknown function, DUF488 YP_003155607.1 PFAM: Redoxin YP_003155608.1 PFAM: Polyphosphate kinase 2 YP_003155609.1 PFAM: Amidohydrolase family YP_003155610.1 PFAM: Peptidase propeptide and YPEB domain YP_003155611.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain; XFP N-terminal domain YP_003155613.1 PFAM: Acylphosphatase YP_003155614.1 PFAM: Major Facilitator Superfamily YP_003155615.1 PFAM: NAD dependent epimerase/dehydratase family YP_003155616.1 PFAM: Protein of unknown function (DUF808) YP_003155617.1 PFAM: Phosphoribosyl transferase domain YP_003155618.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_003155620.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_003155621.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase YP_003155622.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; Phosphotransferase system, EIIC; PTS system, Fructose specific IIB subunit; TIGRFAM: PTS system, fructose subfamily, IIC component; PTS system, fructose subfamily, IIA component; PTS system, fructose-specific, IIB component YP_003155623.1 PFAM: Integral membrane protein (intg_mem_TP0381); TIGRFAM: conserved hypothetical integral membrane protein TIGR02206 YP_003155624.1 PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative YP_003155625.1 PFAM: Thymidine kinase YP_003155626.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug) YP_003155629.1 PFAM: Integral membrane protein TerC family YP_003155630.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_003155631.1 PFAM: Phosphotransferase enzyme family YP_003155632.1 PFAM: Transglycosylase-like domain YP_003155633.1 PFAM: Transposase YP_003155634.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003155635.1 PFAM: Xylose isomerase-like TIM barrel YP_003155636.1 PFAM: SurA N-terminal domain YP_003155637.1 PFAM: Antibiotic biosynthesis monooxygenase YP_003155638.1 PFAM: Bacterial protein of unknown function (DUF899) YP_003155639.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein YP_003155640.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_003155641.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_003155642.1 PFAM: Aldehyde dehydrogenase family YP_003155643.1 PFAM: GMC oxidoreductase; GMC oxidoreductase YP_003155644.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_003155646.1 PFAM: Alpha amylase, catalytic domain YP_003155647.1 PFAM: Sulfatase; TIGRFAM: choline-sulfatase YP_003155648.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_003155651.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_003155652.1 PFAM: Pterin 4 alpha carbinolamine dehydratase YP_003155653.1 PFAM: RF-1 domain YP_003155654.1 PFAM: Acyltransferase YP_003155657.1 PFAM: PAP2 superfamily YP_003155658.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_003155659.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_003155660.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_003155661.1 PFAM: ABC transporter YP_003155662.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain YP_003155663.1 PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family YP_003155664.1 PFAM: S4 domain; RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_003155665.1 PFAM: Carboxymuconolactone decarboxylase family YP_003155666.1 PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA YP_003155668.1 PFAM: Bacterial regulatory protein, arsR family YP_003155669.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_003155672.1 PFAM: Antibiotic biosynthesis monooxygenase YP_003155674.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_003155675.1 PFAM: Bacterial regulatory protein, arsR family YP_003155676.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_003155678.1 PFAM: RmuC family YP_003155679.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_003155680.1 PFAM: OB-fold nucleic acid binding domain; Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_003155681.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_003155683.1 PFAM: pfkB family carbohydrate kinase YP_003155684.1 PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II YP_003155686.1 PFAM: PhoH-like protein YP_003155687.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_003155688.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_003155690.1 PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: mycothiol conjugate amidase Mca YP_003155692.1 PFAM: Prokaryotic transcription elongation factor, GreA/GreB, N-terminal domain; Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain; TIGRFAM: transcription elongation factor GreA YP_003155693.1 PFAM: Domain of unknown function DUF20 YP_003155694.1 PFAM: ABC transporter YP_003155696.1 PFAM: Acetyltransferase (GNAT) family YP_003155697.1 PFAM: Glycoprotease family YP_003155698.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein YP_003155699.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_003155700.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related YP_003155701.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: holo-[acyl-carrier-protein] synthase; phosphopantethiene--protein transferase domain YP_003155702.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_003155703.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_003155704.1 PFAM: Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_003155705.1 PFAM: SNF2 family N-terminal domain; Helicase conserved C-terminal domain YP_003155707.1 PFAM: Ribosomal protein S9/S16 YP_003155708.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_003155709.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_003155712.1 PFAM: Uncharacterized conserved protein (DUF2249) YP_003155713.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, C domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_003155714.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_003155715.1 PFAM: ABC transporter; Cobalt transport protein YP_003155716.1 PFAM: ABC-type cobalt transport system, permease component YP_003155717.1 PFAM: YKOF-related Family YP_003155718.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_003155719.1 PFAM: Metallo-beta-lactamase superfamily YP_003155720.1 PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein YP_003155721.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I YP_003155722.1 PFAM: Methyltransferase small domain YP_003155723.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_003155725.1 PFAM: MerR, DNA binding; TipAS antibiotic-recognition domain; MerR family regulatory protein YP_003155726.1 PFAM: Inosine-uridine preferring nucleoside hydrolase YP_003155727.1 PFAM: HNH endonuclease YP_003155728.1 PFAM: MaoC like domain YP_003155729.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003155730.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_003155731.1 PFAM: Bacterial regulatory proteins, tetR family YP_003155732.1 PFAM: Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA oxidase YP_003155733.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_003155734.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_003155735.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_003155736.1 PFAM: Ribosomal protein S11 YP_003155737.1 PFAM: Ribosomal protein S13/S18 YP_003155738.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_003155739.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_003155740.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_003155741.1 PFAM: Adenylate kinase; TIGRFAM: adenylate kinases YP_003155742.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_003155743.1 PFAM: Ribosomal protein L15; Ribosomal protein L15 amino terminal region; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_003155744.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_003155745.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_003155746.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_003155747.1 PFAM: Ribosomal protein L6 YP_003155748.1 PFAM: Ribosomal protein S8 YP_003155749.1 PFAM: Ribosomal protein S14p/S29e YP_003155750.1 PFAM: Ribosomal protein L5; ribosomal L5P family C-terminus YP_003155751.1 TIGRFAM: ribosomal protein L24, bacterial/organelle YP_003155752.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_003155754.1 PFAM: Ribosomal protein S17 YP_003155755.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_003155756.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_003155757.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_003155758.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_003155759.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_003155760.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_003155761.1 PFAM: Ribosomal protein L23 YP_003155762.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_003155763.1 PFAM: Ribosomal protein L3 YP_003155764.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_003155765.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155766.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155767.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003155769.1 PFAM: Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_003155770.1 PFAM: Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor G, domain IV; TIGRFAM: small GTP-binding protein domain; translation elongation factor EF-G; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_003155771.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_003155772.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_003155773.1 PFAM: G5 domain; Domain of unknown function (DUF348); Transglycosylase-like domain YP_003155774.1 PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_003155775.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_003155776.1 PFAM: Subtilase family; Peptidase inhibitor I9; Domain of Unknown Function (DUF1034); TIGRFAM: LPXTG-motif cell wall anchor domain YP_003155777.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_003155778.1 PFAM: Ribosomal protein L10 YP_003155779.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_003155780.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_003155781.1 PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG YP_003155782.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_003155783.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_003155784.1 catalyzes the formation of inosine from adenosine YP_003155785.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; Galactokinase galactose-binding signature; TIGRFAM: galactokinase YP_003155786.1 PFAM: Domain of unknown function (DUF2394) YP_003155787.1 PFAM: Protein of unknown function (DUF1212) YP_003155789.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase YP_003155790.1 PFAM: Polyphosphate kinase 2 YP_003155791.1 PFAM: MGS-like domain; AICARFT/IMPCHase bienzyme; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_003155792.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_003155795.1 PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases YP_003155796.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_003155797.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YP_003155798.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase YP_003155799.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase) YP_003155800.1 PFAM: AMP-binding enzyme YP_003155801.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003155804.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_003155805.1 PFAM: ResB-like family YP_003155806.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_003155807.1 PFAM: Redoxin; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003155808.1 PFAM: Phosphoglycerate mutase family YP_003155809.1 PFAM: MarR family YP_003155810.1 PFAM: YceI-like domain YP_003155811.1 PFAM: Glutaredoxin-like domain (DUF836) YP_003155814.1 PFAM: Histone deacetylase domain YP_003155815.1 PFAM: Cation transport protein YP_003155816.1 PFAM: TrkA-C domain; TrkA-N domain YP_003155817.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_003155818.1 PFAM: Domain of unknown function (DUF368) YP_003155820.1 PFAM: DeoR-like helix-turn-helix domain; Bacterial regulatory proteins, deoR family YP_003155822.1 PFAM: Copper resistance protein CopC YP_003155823.1 PFAM: Carbon-nitrogen hydrolase YP_003155825.1 PFAM: Cyclic nucleotide-binding domain; Bacterial regulatory proteins, crp family YP_003155826.1 PFAM: Heavy-metal-associated domain YP_003155827.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_003155828.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_003155829.1 PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat YP_003155830.1 PFAM: STAS domain; Sulfate transporter family YP_003155833.1 PFAM: Sodium/calcium exchanger protein YP_003155834.1 PFAM: Dienelactone hydrolase family YP_003155835.1 PFAM: CBS domain pair; ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_003155836.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155837.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_003155838.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_003155839.1 PFAM: ROK family YP_003155840.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003155841.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155842.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155843.1 PFAM: Alpha amylase, catalytic domain YP_003155844.1 PFAM: Cupin domain YP_003155847.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_003155848.1 PFAM: DSBA-like thioredoxin domain YP_003155850.1 PFAM: Phosphotransferase enzyme family YP_003155851.1 PFAM: Helix-turn-helix YP_003155853.1 PFAM: Aldo/keto reductase family YP_003155854.1 PFAM: Major Facilitator Superfamily YP_003155855.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_003155856.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase YP_003155857.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde YP_003155858.1 N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid YP_003155860.1 PFAM: Uncharacterized protein family UPF0029; TIGRFAM: conserved hypothetical protein TIGR00257 YP_003155862.1 PFAM: Transglycosylase associated protein YP_003155863.1 PFAM: Ribonucleotide reductase, small chain YP_003155864.1 PFAM: Protein of unknown function (DUF405); Protein of unknown function (DUF418) YP_003155865.1 PFAM: Transcriptional regulator PadR-like family YP_003155867.1 PFAM: Ribonucleotide reductase N-terminal; Ribonucleotide reductase, barrel domain; Ribonucleotide reductase, all-alpha domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit YP_003155868.1 PFAM: NrdI Flavodoxin like; TIGRFAM: ribonucleoside-diphosphate reductase 2, operon protein nrdI YP_003155869.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein NrdH YP_003155870.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_003155871.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_003155872.1 PFAM: Universal stress protein family YP_003155873.1 PFAM: Catalase; Catalase-related immune-responsive YP_003155874.1 PFAM: Ferric uptake regulator family YP_003155875.1 PFAM: short chain dehydrogenase YP_003155876.1 PFAM: short chain dehydrogenase YP_003155877.1 PFAM: alpha/beta hydrolase fold YP_003155879.1 PFAM: ABC transporter YP_003155880.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003155881.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_003155882.1 PFAM: Domain of unknown function (DUF1025) YP_003155883.1 PFAM: Zinc-binding dehydrogenase YP_003155884.1 PFAM: Transcriptional regulator PadR-like family YP_003155886.1 PFAM: Formate--tetrahydrofolate ligase YP_003155887.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit YP_003155890.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_003155891.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_003155892.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter YP_003155893.1 PFAM: Major Facilitator Superfamily YP_003155895.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_003155896.1 PFAM: Bacterial regulatory proteins, tetR family YP_003155898.1 PFAM: NHL repeat YP_003155899.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_003155900.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_003155901.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_003155902.1 PFAM: ABC transporter YP_003155903.1 PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase YP_003155904.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_003155905.1 PFAM: FAD binding domain YP_003155906.1 PFAM: Copper resistance protein D; Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) YP_003155907.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_003155908.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_003155909.1 PFAM: e3 binding domain; Biotin-requiring enzyme; 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YP_003155910.1 PFAM: Transketolase, pyrimidine binding domain; Transketolase, C-terminal domain YP_003155911.1 PFAM: Dehydrogenase E1 component YP_003155912.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_003155913.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_003155914.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155915.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155916.1 PFAM: Bacterial extracellular solute-binding protein YP_003155917.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_003155918.1 PFAM: Major Facilitator Superfamily YP_003155919.1 PFAM: RDD family YP_003155920.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_003155921.1 PFAM: alpha/beta hydrolase fold YP_003155922.1 PFAM: Membrane protein of unknown function YP_003155923.1 PFAM: Alpha amylase, catalytic domain YP_003155924.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_003155925.1 PFAM: short chain dehydrogenase YP_003155926.1 PFAM: CAAX amino terminal protease family YP_003155927.1 PFAM: Rhodanese-like domain YP_003155928.1 PFAM: Predicted permease YP_003155929.1 PFAM: ABC transporter YP_003155930.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_003155931.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_003155932.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC YP_003155933.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein YP_003155935.1 PFAM: NUDIX domain; Phosphoglycerate mutase family YP_003155936.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: mycothiol biosynthesis acetyltransferase YP_003155940.1 PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ YP_003155943.1 PFAM: Protein of unknown function (DUF2516) YP_003155944.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_003155945.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate YP_003155946.1 PFAM: SpoU rRNA Methylase family YP_003155947.1 PFAM: SNARE associated Golgi protein YP_003155948.1 PFAM: Putative neutral zinc metallopeptidase YP_003155949.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_003155950.1 PFAM: short chain dehydrogenase YP_003155951.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III YP_003155953.1 PFAM: Type II/IV secretion system protein YP_003155954.1 PFAM: Bacterial type II secretion system protein F domain YP_003155956.1 PFAM: Transposase DDE domain YP_003155963.1 PFAM: Resolvase, N terminal domain YP_003155964.1 PFAM: Transposase YP_003155970.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm) YP_003155971.1 PFAM: Recombinase; Resolvase, N terminal domain YP_003155974.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase YP_003155975.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases YP_003155976.1 PFAM: PAP2 superfamily YP_003155977.1 PFAM: DNA topoisomerase; Toprim domain; TIGRFAM: DNA topoisomerase I, bacterial YP_003155978.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003155979.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155980.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003155981.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_003155982.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_003155983.1 TIGRFAM: DNA polymerase III, delta' subunit YP_003155985.1 PFAM: 'Cold-shock' DNA-binding domain YP_003155986.1 PFAM: NUDIX domain YP_003155987.1 PFAM: Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_003155988.1 PFAM: Cyclic nucleotide-binding domain; Bacterial regulatory proteins, crp family YP_003155989.1 PFAM: Metallo-beta-lactamase superfamily YP_003155990.1 PFAM: Endoribonuclease L-PSP YP_003155992.1 PFAM: Transcription factor WhiB YP_003155993.1 PFAM: PASTA domain; Transglycosylase; Penicillin binding protein transpeptidase domain YP_003155994.1 PFAM: Calcineurin-like phosphoesterase YP_003155995.1 PFAM: NlpC/P60 family; Putative peptidoglycan binding domain YP_003155996.1 PFAM: Glycosyl hydrolase family 20, catalytic domain YP_003155999.1 PFAM: Phosphotransferase enzyme family YP_003156002.1 PFAM: Glycosyl transferase family 2 YP_003156003.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase YP_003156005.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_003156006.1 PFAM: short chain dehydrogenase YP_003156007.1 PFAM: Transposase YP_003156008.1 PFAM: ABC transporter YP_003156009.1 PFAM: ABC-2 type transporter YP_003156010.1 PFAM: ExoV-like protein YP_003156011.1 PFAM: Glycosyl transferase family 2 YP_003156012.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase YP_003156013.1 PFAM: Glycosyl transferase family 2 YP_003156014.1 PFAM: Acyltransferase family YP_003156015.1 PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain; ABC transporter YP_003156016.1 PFAM: FecCD transport family YP_003156017.1 PFAM: FecCD transport family YP_003156018.1 PFAM: Periplasmic binding protein YP_003156021.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain YP_003156024.1 PFAM: Bacterial extracellular solute-binding protein YP_003156025.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156026.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156027.1 PFAM: Beta galactosidase small chain; Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain YP_003156030.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylases, various specificities YP_003156031.1 PFAM: Acyltransferase family YP_003156033.1 catalyzes the removal of amino acids from the N termini of peptides YP_003156034.1 PFAM: Acyltransferase family YP_003156037.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_003156038.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_003156039.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase YP_003156040.1 PFAM: Chlorite dismutase YP_003156041.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_003156042.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_003156043.1 PFAM: Uroporphyrinogen-III synthase HemD YP_003156044.1 PFAM: Delta-aminolevulinic acid dehydratase YP_003156045.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_003156047.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter YP_003156048.1 PFAM: Pentapeptide repeats (8 copies) YP_003156049.1 PFAM: Glycosyl transferases group 1 YP_003156050.1 PFAM: NAD dependent epimerase/dehydratase family YP_003156051.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_003156052.1 PFAM: Beta-lactamase YP_003156053.1 PFAM: Beta-lactamase YP_003156054.1 PFAM: Ykud domain; Putative peptidoglycan binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003156055.1 PFAM: FHA domain YP_003156056.1 PFAM: FHA domain YP_003156057.1 PFAM: Protein phosphatase 2C YP_003156058.1 PFAM: Cell cycle protein YP_003156059.1 PFAM: Penicillin binding protein transpeptidase domain YP_003156060.1 PFAM: Protein kinase domain YP_003156061.1 PFAM: PASTA domain; Protein kinase domain YP_003156062.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_003156064.1 PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein YP_003156065.1 PFAM: Bacterial protein of unknown function (DUF881) YP_003156066.1 PFAM: Uncharacterised protein family (UPF0233) YP_003156068.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_003156069.1 PFAM: Protein of unknown function (DUF1037) YP_003156071.1 PFAM: Phosphoglycerate mutase family YP_003156072.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_003156073.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_003156074.1 PFAM: short chain dehydrogenase YP_003156075.1 PFAM: Male sterility protein; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; HAD-superfamily subfamily IB hydrolase, TIGR01490 YP_003156078.1 PFAM: ABC transporter YP_003156079.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_003156080.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_003156081.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_003156082.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_003156085.1 PFAM: Methyltransferase domain YP_003156086.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_003156087.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_003156088.1 PFAM: Protein of unknown function (DUF456) YP_003156089.1 PFAM: VanZ like family YP_003156090.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_003156091.1 TIGRFAM: exonuclease SbcC YP_003156092.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: exonuclease SbcD YP_003156093.1 catalyzes the formation of 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate with the subsequent phosphorylation to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate and catalyzes the hydrolysis of 4-amino-5-aminomethyl-2-methylpyrimidine to form hydroxy-pyrimidine YP_003156094.1 PFAM: Major Facilitator Superfamily YP_003156095.1 PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase YP_003156096.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate YP_003156097.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_003156098.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Pyridine nucleotide-disulphide oxidoreductase YP_003156100.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_003156101.1 PFAM: 5'-nucleotidase, C-terminal domain; TIGRFAM: LPXTG-motif cell wall anchor domain; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_003156102.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_003156103.1 PFAM: Transglutaminase-like superfamily YP_003156104.1 PFAM: Protein of unknown function DUF58 YP_003156105.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_003156106.1 TIGRFAM: LPXTG-motif cell wall anchor domain YP_003156107.1 PFAM: Major Facilitator Superfamily YP_003156108.1 PFAM: Bacterial regulatory proteins, tetR family YP_003156109.1 PFAM: Xylose isomerase-like TIM barrel YP_003156110.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_003156111.1 PFAM: Patatin-like phospholipase YP_003156112.1 PFAM: Helix-turn-helix YP_003156113.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_003156114.1 PFAM: Protein of unknown function (DUF1469) YP_003156118.1 PFAM: Glycosyl transferase family 2 YP_003156119.1 PFAM: Response regulator receiver domain YP_003156120.1 PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain YP_003156121.1 PFAM: Acyltransferase family YP_003156123.1 PFAM: Peptidase family M23 YP_003156125.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_003156126.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003156127.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156128.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156129.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_003156130.1 PFAM: FAD dependent oxidoreductase YP_003156135.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_003156136.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_003156137.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156138.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; Binding-protein-dependent transport system inner membrane component; ABC transporter YP_003156139.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_003156140.1 PFAM: Luciferase-like monooxygenase YP_003156142.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase YP_003156144.1 PFAM: Tetratricopeptide repeat; CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Glycosyl transferases group 1 YP_003156145.1 PFAM: Cytidylyltransferase; TIGRFAM: glycerol-3-phosphate cytidylyltransferase; cytidyltransferase-related domain YP_003156146.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Glycosyl transferase family 2 YP_003156147.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YP_003156148.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_003156150.1 PFAM: Glycosyl transferases group 1 YP_003156152.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_003156153.1 PFAM: ABC transporter YP_003156154.1 PFAM: ABC-2 type transporter YP_003156155.1 PFAM: Glycosyl transferases group 1 YP_003156157.1 PFAM: Bacterial regulatory proteins, lacI family YP_003156159.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156160.1 PFAM: ABC transporter; TOBE domain YP_003156161.1 PFAM: Bacterial extracellular solute-binding protein YP_003156162.1 PFAM: MgtC family YP_003156166.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE YP_003156167.1 PFAM: NrdI Flavodoxin like; TIGRFAM: ribonucleoside-diphosphate reductase 2, operon protein nrdI YP_003156169.1 PFAM: Metallo-beta-lactamase superfamily YP_003156171.1 PFAM: Acetyltransferase (GNAT) family YP_003156173.1 PFAM: Sulfatase YP_003156174.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_003156175.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_003156176.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_003156177.1 PFAM: Bacterial regulatory proteins, tetR family YP_003156178.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase YP_003156179.1 PFAM: GHMP kinases N terminal domain; Galactokinase galactose-binding signature; GHMP kinases C terminal YP_003156180.1 PFAM: Nucleotidyl transferase YP_003156181.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YP_003156182.1 PFAM: ROK family YP_003156183.1 PFAM: Glycosyl transferases group 1 YP_003156184.1 PFAM: PRC-barrel domain YP_003156185.1 PFAM: Bacterial regulatory proteins, tetR family YP_003156186.1 PFAM: Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_003156187.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_003156188.1 PFAM: PT repeat; Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003156189.1 PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain YP_003156190.1 PFAM: Major Facilitator Superfamily YP_003156191.1 PFAM: Carbon-nitrogen hydrolase; NAD synthase YP_003156192.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156193.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156194.1 PFAM: Bacterial extracellular solute-binding protein YP_003156195.1 PFAM: ABC transporter YP_003156198.1 PFAM: RecR protein; Toprim domain; TIGRFAM: recombination protein RecR YP_003156199.1 PFAM: Integrase core domain YP_003156200.1 PFAM: Protein of unknown function (DUF1237) YP_003156201.1 PFAM: Bacterial transcription activator, effector binding domain YP_003156202.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, subunits gamma and tau YP_003156204.1 PFAM: Sodium:dicarboxylate symporter family YP_003156205.1 PFAM: Major Facilitator Superfamily YP_003156207.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777 YP_003156208.1 PFAM: CAAX amino terminal protease family YP_003156212.1 PFAM: SPFH domain / Band 7 family YP_003156214.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_003156215.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_003156216.1 PFAM: Aldo/keto reductase family YP_003156217.1 PFAM: Aldehyde dehydrogenase family YP_003156218.1 PFAM: Protein of unknown function (DUF779) YP_003156219.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH) YP_003156220.1 PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_003156221.1 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments YP_003156222.1 PFAM: Glycosyl hydrolases family 43 YP_003156223.1 PFAM: FAD binding domain; FAD dependent oxidoreductase YP_003156224.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_003156225.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_003156226.1 PFAM: LrgB-like family YP_003156227.1 PFAM: LrgA family YP_003156228.1 PFAM: Acetyltransferase (GNAT) family YP_003156229.1 PFAM: Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_003156230.1 PFAM: Sodium:neurotransmitter symporter family YP_003156233.1 PFAM: Cobalt transport protein YP_003156234.1 PFAM: ABC transporter YP_003156236.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase, subfamily IIIA YP_003156237.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family YP_003156238.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_003156241.1 PFAM: Radical SAM superfamily YP_003156242.1 PFAM: Prolyl oligopeptidase family YP_003156243.1 PFAM: Luciferase-like monooxygenase YP_003156244.1 PFAM: NADPH-dependent FMN reductase YP_003156245.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein YP_003156246.1 PFAM: Sulfatase YP_003156247.1 PFAM: Xylose isomerase-like TIM barrel YP_003156248.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_003156249.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003156250.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_003156251.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; DeoR-like helix-turn-helix domain YP_003156252.1 PFAM: Bacterial extracellular solute-binding protein YP_003156253.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156254.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156256.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2264) YP_003156258.1 PFAM: Xylose isomerase-like TIM barrel YP_003156259.1 PFAM: Protein of unknown function (DUF993) YP_003156260.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_003156264.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH) YP_003156265.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_003156267.1 PFAM: RNA-metabolising metallo-beta-lactamase; Metallo-beta-lactamase superfamily; TIGRFAM: conserved hypothetical protein YP_003156269.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156271.1 PFAM: Glycosyl hydrolases family 28 YP_003156272.1 PFAM: Bacterial extracellular solute-binding protein YP_003156273.1 PFAM: Protein of unknown function, DUF624 YP_003156274.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156275.1 PFAM: Glycosyl hydrolases family 43 YP_003156276.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003156277.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_003156278.1 PFAM: Xylose isomerase-like TIM barrel YP_003156280.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_003156281.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_003156282.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003156283.1 PFAM: Bacterial extracellular solute-binding protein YP_003156284.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156285.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156286.1 PFAM: Protein of unknown function, DUF624 YP_003156287.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003156288.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_003156289.1 PFAM: Dihydrofolate reductase YP_003156290.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003156291.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156292.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156293.1 PFAM: Bacterial extracellular solute-binding protein YP_003156294.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156295.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156296.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003156297.1 PFAM: Branched-chain amino acid transport system / permease component YP_003156298.1 PFAM: ABC transporter YP_003156300.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003156301.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_003156302.1 catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate YP_003156303.1 PFAM: Integral membrane protein DUF6 YP_003156304.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_003156305.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_003156306.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism YP_003156307.1 PFAM: FAD binding domain; D-arabinono-1,4-lactone oxidase YP_003156309.1 PFAM: Domain of Unknown Function (DUF1206) YP_003156310.1 PFAM: Xylose isomerase-like TIM barrel YP_003156311.1 PFAM: alpha/beta hydrolase fold YP_003156312.1 PFAM: alpha/beta hydrolase fold YP_003156313.1 PFAM: Protein of unknown function (DUF718) YP_003156314.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: L-rhamnose isomerase, Streptomyces subtype YP_003156315.1 PFAM: Class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YP_003156316.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_003156317.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_003156318.1 PFAM: Alpha-L-rhamnosidase N-terminal domain; Bacterial alpha-L-rhamnosidase YP_003156320.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_003156321.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_003156322.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156323.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156324.1 PFAM: Bacterial extracellular solute-binding protein YP_003156325.1 PFAM: Bacterial extracellular solute-binding protein YP_003156326.1 PFAM: Sir2 family YP_003156327.1 PFAM: LamB/YcsF family YP_003156328.1 PFAM: Allophanate hydrolase subunit 1; Allophanate hydrolase subunit 2; TIGRFAM: conserved hypothetical protein TIGR00370; biotin-dependent carboxylase uncharacterized domain YP_003156329.1 PFAM: NUDIX domain YP_003156330.1 PFAM: Major Facilitator Superfamily YP_003156331.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase YP_003156332.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_003156333.1 PFAM: short chain dehydrogenase YP_003156334.1 PFAM: Major Facilitator Superfamily YP_003156335.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_003156336.1 PFAM: Putative sugar-binding domain YP_003156337.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_003156338.1 PFAM: Bacterial extracellular solute-binding protein YP_003156339.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156340.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156341.1 PFAM: SMP-30/Gluconolaconase/LRE-like region YP_003156342.1 PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily YP_003156343.1 PFAM: FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain; TIGRFAM: glycerol kinase YP_003156344.1 PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_003156345.1 PFAM: FAD dependent oxidoreductase YP_003156346.1 PFAM: Putative sugar-binding domain YP_003156347.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_003156348.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_003156350.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_003156351.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_003156352.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003156353.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156354.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156355.1 PFAM: ABC transporter YP_003156356.1 PFAM: Glutamine amidotransferases class-II YP_003156357.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_003156358.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_003156359.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_003156360.1 PFAM: ABC transporter YP_003156361.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine YP_003156362.1 PFAM: GtrA-like protein YP_003156363.1 PFAM: Macro domain YP_003156364.1 PFAM: Aminotransferase class I and II YP_003156366.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YP_003156369.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_003156371.1 PFAM: Acetyltransferase (GNAT) family YP_003156374.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_003156376.1 PFAM: Antibiotic biosynthesis monooxygenase YP_003156377.1 PFAM: Peptidase M66; TIGRFAM: LPXTG-motif cell wall anchor domain YP_003156378.1 PFAM: Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain YP_003156379.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_003156380.1 PFAM: Acetyltransferase (GNAT) family YP_003156384.1 PFAM: Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; Pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine-phosphate oxidase YP_003156385.1 PFAM: Glycosyl hydrolases family 25 YP_003156386.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group YP_003156387.1 PFAM: Beta-lactamase YP_003156388.1 PFAM: Aminoglycoside/hydroxyurea antibiotic resistance kinase YP_003156389.1 PFAM: HNH endonuclease YP_003156390.1 PFAM: Glutathione peroxidase YP_003156392.1 PFAM: Prolyl oligopeptidase family YP_003156394.1 PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA YP_003156395.1 PFAM: Bacterial protein of unknown function (DUF839); TIGRFAM: LPXTG-motif cell wall anchor domain YP_003156396.1 PFAM: Universal stress protein family YP_003156397.1 PFAM: Amino acid permease YP_003156399.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_003156400.1 PFAM: Aldo/keto reductase family YP_003156402.1 PFAM: ABC transporter YP_003156403.1 PFAM: FecCD transport family YP_003156404.1 PFAM: FecCD transport family YP_003156405.1 PFAM: Periplasmic binding protein YP_003156408.1 PFAM: Integral membrane protein DUF6 YP_003156409.1 PFAM: Methyltransferase domain YP_003156411.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin YP_003156412.1 PFAM: Bacterial regulatory proteins, tetR family YP_003156413.1 PFAM: ABC transporter YP_003156414.1 PFAM: ABC-2 type transporter YP_003156416.1 PFAM: Protein of unknown function (DUF1130) YP_003156417.1 PFAM: short chain dehydrogenase YP_003156418.1 PFAM: Thermolysin metallopeptidase, alpha-helical domain; Thermolysin metallopeptidase, catalytic domain YP_003156419.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_003156420.1 PFAM: Nucleoside recognition YP_003156421.1 catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_003156422.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_003156423.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_003156424.1 PFAM: Arginase family; TIGRFAM: formimidoylglutamase YP_003156425.1 PFAM: Domain of unknown function DUF81 YP_003156426.1 PFAM: Phosphotransferase enzyme family YP_003156427.1 PFAM: Fructosamine kinase YP_003156429.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_003156430.1 PFAM: Major Facilitator Superfamily YP_003156431.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_003156433.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_003156434.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_003156435.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156436.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_003156437.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_003156438.1 PFAM: Ferritin-like domain YP_003156439.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_003156440.1 PFAM: Luciferase-like monooxygenase YP_003156441.1 PFAM: Protein of unknown function (DUF418); Protein of unknown function (DUF405) YP_003156442.1 PFAM: Bacterial regulatory proteins, tetR family; Tetracyclin repressor, C-terminal all-alpha domain YP_003156443.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_003156445.1 PFAM: S-layer homology domain YP_003156446.1 PFAM: Peptidase family S41; WD40-like Beta Propeller Repeat YP_003156448.1 PFAM: Universal stress protein family YP_003156450.1 PFAM: Protein of unknown function (DUF461) YP_003156451.1 PFAM: Dyp-type peroxidase family; TIGRFAM: Tat-translocated enzyme; Dyp-type peroxidase family YP_003156452.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_003156454.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_003156455.1 PFAM: Glucuronate isomerase YP_003156456.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_003156457.1 PFAM: Small Multidrug Resistance protein YP_003156458.1 PFAM: Small Multidrug Resistance protein YP_003156459.1 PFAM: Bacterial regulatory proteins, tetR family YP_003156460.1 PFAM: Acetyltransferase (GNAT) family YP_003156461.1 PFAM: AIR carboxylase YP_003156462.1 PFAM: PP-loop family; TIGRFAM: conserved hypothetical protein TIGR00268 YP_003156463.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_003156464.1 PFAM: Methyltransferase domain YP_003156465.1 PFAM: FAD dependent oxidoreductase YP_003156466.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_003156467.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_003156468.1 PFAM: Bacterial regulatory protein, arsR family YP_003156470.1 PFAM: Acetyltransferase (GNAT) family YP_003156471.1 PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter YP_003156472.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_003156473.1 PFAM: Aldo/keto reductase family YP_003156474.1 PFAM: Helix-turn-helix YP_003156475.1 PFAM: Major Facilitator Superfamily YP_003156476.1 PFAM: short chain dehydrogenase YP_003156477.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_003156478.1 PFAM: Amino acid permease YP_003156479.1 PFAM: Thiolase, N-terminal domain; Thiolase, C-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_003156480.1 PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_003156481.1 PFAM: ABC 3 transport family YP_003156482.1 PFAM: ABC transporter YP_003156483.1 PFAM: Periplasmic solute binding protein family YP_003156484.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_003156485.1 PFAM: Major Facilitator Superfamily YP_003156486.1 PFAM: Xylose isomerase-like TIM barrel YP_003156487.1 PFAM: Hemerythrin HHE cation binding domain YP_003156490.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-(or silver)-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_003156491.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_003156492.1 PFAM: Carbonic anhydrase YP_003156496.1 PFAM: chorismate binding enzyme; Aminotransferase class IV; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade YP_003156497.1 PFAM: Protein of unknown function DUF111; TIGRFAM: conserved hypothetical protein TIGR00299 YP_003156499.1 PFAM: Methyltransferase domain YP_003156500.1 PFAM: Major Facilitator Superfamily YP_003156501.1 PFAM: Domain of unknown function DUF21; CBS domain pair YP_003156502.1 PFAM: CBS domain pair; Domain of unknown function DUF21; Transporter associated domain YP_003156503.1 PFAM: Phospholipase/Carboxylesterase YP_003156506.1 PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family YP_003156507.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_003156508.1 PFAM: Proline racemase YP_003156509.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_003156510.1 PFAM: FAD dependent oxidoreductase YP_003156512.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glucose inhibited division protein A; BFD-like [2Fe-2S] binding domain YP_003156513.1 PFAM: Aldehyde dehydrogenase family YP_003156514.1 PFAM: Dihydrodipicolinate synthetase family YP_003156515.1 PFAM: ROK family YP_003156516.1 PFAM: Xylose isomerase-like TIM barrel YP_003156517.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_003156520.1 PFAM: alpha/beta hydrolase fold YP_003156521.1 PFAM: Amino acid permease YP_003156523.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_003156524.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_003156525.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_003156526.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_003156528.1 PFAM: Amino acid permease YP_003156529.1 PFAM: Catalase-related immune-responsive; Catalase YP_003156531.1 PFAM: Transglycosylase; Penicillin binding protein transpeptidase domain; PT repeat YP_003156532.1 PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; tRNA adenylyltransferase YP_003156534.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_003156537.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_003156539.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_003156540.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_003156541.1 PFAM: Glucose inhibited division protein; TIGRFAM: glucose-inhibited division protein B YP_003156542.1 PFAM: R3H domain YP_003156543.1 PFAM: 60Kd inner membrane protein YP_003156544.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278 YP_003156545.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial YP_003156546.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type