-- dump date 20240506_024048 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP013704.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP013704.1.REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter.REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT AnalysisREFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100XREFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBioREFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP013704.1. Annotation modified by submitter. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 4.4; SMRT Analysis HGAP v. 2015 Genome Coverage :: 100X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP014605.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP014605.1.REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserinaREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to andREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of theREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31.REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840).REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200XREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrentREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014605.1. The sequence is near-identical to a 11092 bp contig of B. anserina BA2 (CP005838); the first 7 kb of lpJ is highly similar to and syntenic with the reverse complement of 16.5-23.5 kb region of the 38 kb lp38 linear plasmid of B. burgdorferi B31. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200X Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP018882.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP018882.1.REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840).REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200xREFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrentREFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP018882.1. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. 8.5 Genome Coverage :: 200x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END## COMPLETENESS: not full length. NZ_CP014521.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP014521.1.REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similaritiesREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and otherREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species.REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840).REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC AssemblyREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000XREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBioREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014521.1. A small, probable circular plasmid that has sequence similarities to the lp17 group of linear plasmids of B. burgdorferi and other Lyme disease group species. Sequence similar to B. anserina BA2 plasmid Contig0012 (CP005840). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 1000X Sequencing Technology :: Illumina; IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP014520.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP014520.1.REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous andREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferiREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsingREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, andREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linearREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid.REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC AssemblyREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900XREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBioREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014520.1. The majority of the sequence of this replicon is homologous and largely syntenic with the cp26 circular plasmid of B. burgdorferi B31 and other Lyme disease agents; in Borrelia hermsii, a relapsing fever agent, the resT gene, the guaA and guaB genes, and orthologous PF-32 plasmid partition genes are on a 53 kb linear plasmid. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis HGAP v. 2.1; CLC Assembly Cell v. 8.5 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP014325.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP014325.1.REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT AnalysisREFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900XREFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBioREFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014325.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: CLC Assembly Cell v. v. 4.4; SMRT Analysis v. HGAP v. 2015 Genome Coverage :: 900X Sequencing Technology :: IonTorrent; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 15:00:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 985 CDSs (total) :: 947 Genes (coding) :: 935 CDSs (with protein) :: 935 Genes (RNA) :: 38 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 32 ncRNAs :: 3 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 7 of 12 Pseudo Genes (incomplete) :: 5 of 12 Pseudo Genes (internal stop) :: 2 of 12 Pseudo Genes (multiple problems) :: 2 of 12 ##Genome-Annotation-Data-END## COMPLETENESS: full length.