-- dump date 20140619_002304 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 484020000001 SEQ_END SEQ_END NC_017999.1 2223664 2223664 DR NC_017999.1; contig end 2223664..2223664 Bifidobacterium bifidum BGN4 YP_006393477.1 CDS dnaA NC_017999.1 1 1590 D COG0593:ATPase involved in DNA replicationinitiation; chromosomal replication initiator protein 1..1590 Bifidobacterium bifidum BGN4 13069243 YP_006393478.1 CDS dnaN NC_017999.1 2191 3315 D COG0592:DNA polymerase sliding clamp subunit (PCNAhomolog); DNA polymerase III subunit beta 2191..3315 Bifidobacterium bifidum BGN4 13069265 YP_006393479.1 CDS BBB_0003 NC_017999.1 3282 3401 R hypothetical protein complement(3282..3401) Bifidobacterium bifidum BGN4 13069345 YP_006393480.1 CDS recF NC_017999.1 3403 4716 D COG1195:Recombinational DNA repair ATPase (RecFpathway); DNA replication and repair protein 3403..4716 Bifidobacterium bifidum BGN4 13069427 YP_006393481.1 CDS BBB_0005 NC_017999.1 4713 5285 D COG5512:Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives; hypothetical protein 4713..5285 Bifidobacterium bifidum BGN4 13069444 YP_006393482.1 CDS gyrB NC_017999.1 5487 7598 D COG0187:Type IIA topoisomerase (DNA gyrase/topoII, topoisomerase IV), B subunit; DNA gyrase subunit B 5487..7598 Bifidobacterium bifidum BGN4 13069446 YP_006393483.1 CDS gyrA NC_017999.1 7736 10468 D COG0188:Type IIA topoisomerase (DNA gyrase/topoII, topoisomerase IV), A subunit; DNA gyrase subunit A 7736..10468 Bifidobacterium bifidum BGN4 13069448 YP_006393484.1 CDS BBB_0008 NC_017999.1 10528 11085 D hypothetical protein 10528..11085 Bifidobacterium bifidum BGN4 13069451 YP_006393485.1 CDS abfA NC_017999.1 11448 11735 R arabinofuranosidase complement(11448..11735) Bifidobacterium bifidum BGN4 13069453 YP_006393486.1 CDS BBB_0010 NC_017999.1 11728 12264 D hypothetical protein 11728..12264 Bifidobacterium bifidum BGN4 13069455 YP_006393487.1 CDS BBB_0011 NC_017999.1 12681 13595 R hypothetical protein complement(12681..13595) Bifidobacterium bifidum BGN4 13070517 YP_006393488.1 CDS celR NC_017999.1 13859 14887 R COG1609:Transcriptional regulators; HTH-type transcriptional regulator complement(13859..14887) Bifidobacterium bifidum BGN4 13070518 YP_006393489.1 CDS BBB_0013 NC_017999.1 15190 15357 R hypothetical protein complement(15190..15357) Bifidobacterium bifidum BGN4 13070519 YP_006393490.1 CDS BBB_0014 NC_017999.1 15356 16507 D COG2267:Lysophospholipase; putative lysophospholipase 15356..16507 Bifidobacterium bifidum BGN4 13070520 YP_006393491.1 CDS BBB_0015 NC_017999.1 16556 16648 R COG1609:Transcriptional regulators; hypothetical protein complement(16556..16648) Bifidobacterium bifidum BGN4 13070521 YP_006393492.1 CDS BBB_0016 NC_017999.1 17814 18167 R hypothetical protein complement(17814..18167) Bifidobacterium bifidum BGN4 13070522 YP_006393493.1 CDS BBB_0017 NC_017999.1 18421 18930 D hypothetical protein 18421..18930 Bifidobacterium bifidum BGN4 13070523 YP_006393494.1 CDS BBB_0018 NC_017999.1 18968 19153 D hypothetical protein 18968..19153 Bifidobacterium bifidum BGN4 13070524 YP_006393495.1 CDS gdh NC_017999.1 19448 20794 R COG0334:Glutamate dehydrogenase/leucinedehydrogenase; NADP-specific glutamate dehydrogenase complement(19448..20794) Bifidobacterium bifidum BGN4 13070525 YP_006393496.1 CDS yieP NC_017999.1 20898 21698 R COG2186:Transcriptional regulators; putative HTH-type transcriptional regulator complement(20898..21698) Bifidobacterium bifidum BGN4 13070526 YP_006393497.1 CDS mscL NC_017999.1 21752 22186 D COG1970:Large-conductance mechanosensitive channel; large conductance mechanosensitive channel 21752..22186 Bifidobacterium bifidum BGN4 13070527 YP_006393498.1 CDS abfA NC_017999.1 22561 26007 R COG3534:Alpha-L-arabinofuranosidase; alpha-N-arabinofuranosidase complement(22561..26007) Bifidobacterium bifidum BGN4 13070528 YP_006393499.1 CDS BBB_0023 NC_017999.1 26567 26698 R hypothetical protein complement(26567..26698) Bifidobacterium bifidum BGN4 13070531 YP_006393500.1 CDS chb NC_017999.1 26811 29147 D COG3525:N-acetyl-beta-hexosaminidase; putative beta-hexosaminidase A 26811..29147 Bifidobacterium bifidum BGN4 13070532 YP_006393501.1 CDS purR NC_017999.1 29620 30672 R COG1609:Transcriptional regulators; HTH-type transcriptional repressor complement(29620..30672) Bifidobacterium bifidum BGN4 13070533 YP_006393502.1 CDS ulaC NC_017999.1 31002 31451 D COG1762:Phospho transferase systemmannitol/fructose-specific IIA domain (Ntr-type); ascorbate-specific phospho transferase enzyme IIA component 31002..31451 Bifidobacterium bifidum BGN4 13070534 YP_006393503.1 CDS ulaB NC_017999.1 31575 31847 D COG3414:Phospho transferasesystem, galactitol-specific IIB component; ascorbate-specific phospho transferase enzyme IIB component 31575..31847 Bifidobacterium bifidum BGN4 13070535 YP_006393504.1 CDS ulaA NC_017999.1 31964 33430 D COG3037:Uncharacterized protein conserved inbacteria; ascorbate-specific permease IIC component 31964..33430 Bifidobacterium bifidum BGN4 13070536 YP_006393505.1 CDS BBB_0029 NC_017999.1 33716 34456 D COG1451:Predicted metal-dependent hydrolase; putative metal-dependent hydrolase 33716..34456 Bifidobacterium bifidum BGN4 13070537 YP_006393506.1 CDS dps NC_017999.1 34643 35122 R COG0783:DNA-binding ferritin-like protein(oxidative damage protectant); DNA protection during starvation protein complement(34643..35122) Bifidobacterium bifidum BGN4 13070538 YP_006393507.1 CDS yddG NC_017999.1 35570 36643 D COG0697:Permeases of the drug/metabolite transporter (DMT) superfamily; inner membrane protein 35570..36643 Bifidobacterium bifidum BGN4 13070539 YP_006393508.1 CDS BBB_0032 NC_017999.1 36679 38001 R COG1253:Hemolysins and related proteins containingCBS domains; putative transport protein complement(36679..38001) Bifidobacterium bifidum BGN4 13070540 YP_006393509.1 CDS BBB_0033 NC_017999.1 38210 38758 R COG1609:Transcriptional regulators; putative HTH-type transcriptional regulator complement(38210..38758) Bifidobacterium bifidum BGN4 13070541 YP_006393510.1 CDS cynT NC_017999.1 38902 39585 R COG0288:Carbonic anhydrase; carbonic anhydrase complement(38902..39585) Bifidobacterium bifidum BGN4 13070542 YP_006393511.1 CDS ahpC NC_017999.1 39868 40431 D COG0450:Peroxiredoxin; peroxiredoxin 39868..40431 Bifidobacterium bifidum BGN4 13070543 YP_006393512.1 CDS trxB NC_017999.1 40775 42688 D COG0492:Thioredoxin reductase; thioredoxin-disulfide reductase 40775..42688 Bifidobacterium bifidum BGN4 13070544 YP_006393513.1 CDS recG NC_017999.1 42797 44443 D COG2865:Predicted transcriptional regulatorcontaining an HTH domain and an uncharacterized domainshared wi; ATP-dependent DNA helicase 42797..44443 Bifidobacterium bifidum BGN4 13070545 YP_006393514.1 CDS yhjX NC_017999.1 44730 46016 R COG0477:Permeases of the major facilitatorsuperfamily; inner membrane protein complement(44730..46016) Bifidobacterium bifidum BGN4 13070546 YP_006393515.1 CDS ppc NC_017999.1 46504 49260 R COG2352:Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(46504..49260) Bifidobacterium bifidum BGN4 13070547 YP_006393516.1 CDS BBB_0040 NC_017999.1 49461 49577 R hypothetical protein complement(49461..49577) Bifidobacterium bifidum BGN4 13070548 YP_006393517.1 CDS BBB_0041 NC_017999.1 49671 51668 D hypothetical protein 49671..51668 Bifidobacterium bifidum BGN4 13070549 YP_006393518.1 CDS BBB_0042 NC_017999.1 51741 52862 R COG1574:Predicted metal-dependent hydrolase withthe TIM-barrel fold; putative metal-dependent hydrolase complement(51741..52862) Bifidobacterium bifidum BGN4 13070550 YP_006393519.1 CDS BBB_0043 NC_017999.1 53405 54424 D hypothetical protein 53405..54424 Bifidobacterium bifidum BGN4 13070551 YP_006393520.1 CDS trpS NC_017999.1 54898 55995 R COG0180:Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(54898..55995) Bifidobacterium bifidum BGN4 13070552 YP_006393521.1 CDS BBB_0045 NC_017999.1 56136 56516 D hypothetical protein 56136..56516 Bifidobacterium bifidum BGN4 13070553 YP_006393522.1 CDS BBB_0046 NC_017999.1 56710 57276 D COG3279:Response regulator of the LytR/AlgR family; putative response regulatory protein 56710..57276 Bifidobacterium bifidum BGN4 13070554 YP_006393523.1 CDS BBB_0047 NC_017999.1 57359 57964 D COG2972:Predicted signal transduction protein witha C-terminal ATPase domain; putative ATP-binding region, ATPase 57359..57964 Bifidobacterium bifidum BGN4 13070555 YP_006393524.1 CDS rfbB NC_017999.1 58152 59177 D COG1088:dTDP-D-glucose 4, 6-dehydratase; dTDP-glucose 4, 6-dehydratase 58152..59177 Bifidobacterium bifidum BGN4 13070556 YP_006393525.1 CDS BBB_0049 NC_017999.1 59189 59440 R putative O-acyl transferase complement(59189..59440) Bifidobacterium bifidum BGN4 13070557 YP_006393526.1 CDS lytC NC_017999.1 59520 62123 D COG2730:Endoglucanase; 1,4-beta-N-acetylmuramidase 59520..62123 Bifidobacterium bifidum BGN4 13070558 YP_006393527.1 CDS wcaA NC_017999.1 62196 63140 R COG0463:Glycosyl transferases involved in cell wallbiogenesis; putative glycosyl transferase complement(62196..63140) Bifidobacterium bifidum BGN4 13070559 YP_006393528.1 CDS BBB_0052 NC_017999.1 63457 65511 D hypothetical protein 63457..65511 Bifidobacterium bifidum BGN4 13070560 YP_006393529.1 CDS BBB_0053 NC_017999.1 65604 66695 R proline symporter complement(65604..66695) Bifidobacterium bifidum BGN4 13070561 YP_006393530.1 CDS BBB_0054 NC_017999.1 66791 68071 R COG3547:Transposase and inactivated derivatives; transposase-like protein complement(66791..68071) Bifidobacterium bifidum BGN4 13070562 YP_006393531.1 CDS BBB_0055 NC_017999.1 68329 68760 R COG2801:Transposase and inactivated derivatives; putative transposase for insertion sequenceelement IS986/IS6110 complement(68329..68760) Bifidobacterium bifidum BGN4 13070563 YP_006393532.1 CDS tnpB NC_017999.1 68875 69162 R transposase subunit B complement(68875..69162) Bifidobacterium bifidum BGN4 13070564 YP_006393533.1 CDS BBB_0057 NC_017999.1 69334 69534 R COG2963:Transposase and inactivated derivatives; insertion element IS629 complement(69334..69534) Bifidobacterium bifidum BGN4 13070565 YP_006393534.1 CDS BBB_0058 NC_017999.1 69580 69729 R hypothetical protein complement(69580..69729) Bifidobacterium bifidum BGN4 13070566 YP_006393535.1 CDS BBB_0059 NC_017999.1 69955 71115 D hypothetical protein 69955..71115 Bifidobacterium bifidum BGN4 13070567 YP_006393536.1 CDS BBB_0060 NC_017999.1 71254 72972 D COG0438:Glycosyl transferase; putative glycosyl transferase 71254..72972 Bifidobacterium bifidum BGN4 13070568 YP_006393537.1 CDS ywdF NC_017999.1 72972 73910 D COG1216:Predicted glycosyl transferases; glycosyl transferase family protein 72972..73910 Bifidobacterium bifidum BGN4 13070569 YP_006393538.1 CDS rfbA NC_017999.1 73968 74804 D COG1682:ABC-type polysaccharide/polyol phosphateexport systems, permease component; O-antigen export system permease protein 73968..74804 Bifidobacterium bifidum BGN4 13070570 YP_006393539.1 CDS abcA NC_017999.1 74816 76126 D COG1134:ABC-type polysaccharide/polyol phosphatetransport system, ATPase component; ABC transporter 74816..76126 Bifidobacterium bifidum BGN4 13070571 YP_006393540.1 CDS glfT NC_017999.1 76341 78371 D COG1216:Predicted glycosyl transferases; glycosyl transferase family protein 76341..78371 Bifidobacterium bifidum BGN4 13070572 YP_006393541.1 CDS glf NC_017999.1 78464 79642 D COG0562:UDP-galactopyranose mutase; UDP-galactopyranose mutase 78464..79642 Bifidobacterium bifidum BGN4 13070573 YP_006393542.1 CDS BBB_0066 NC_017999.1 80341 82128 R hypothetical protein complement(80341..82128) Bifidobacterium bifidum BGN4 13070574 YP_006393543.1 CDS rfbB NC_017999.1 82233 83282 D COG1088:dTDP-D-glucose 4, 6-dehydratase; dTDP-glucose 4, 6-dehydratase 82233..83282 Bifidobacterium bifidum BGN4 13070575 YP_006393544.1 CDS BBB_0068 NC_017999.1 83621 84892 R COG0477:Permeases of the major facilitatorsuperfamily; putative permease complement(83621..84892) Bifidobacterium bifidum BGN4 13070576 YP_006393545.1 CDS yerO NC_017999.1 85048 85710 R COG1309:Transcriptional regulator; putative HTH-type transcriptional regulator complement(85048..85710) Bifidobacterium bifidum BGN4 13070577 YP_006393546.1 CDS BBB_0070 NC_017999.1 86305 86490 D hypothetical protein 86305..86490 Bifidobacterium bifidum BGN4 13070578 YP_006393547.1 CDS yhcA NC_017999.1 86721 88772 D COG0477:Permeases of the major facilitatorsuperfamily; putative transporter 86721..88772 Bifidobacterium bifidum BGN4 13070579 YP_006393548.1 CDS BBB_0072 NC_017999.1 89196 89450 R COG2801:Transposase and inactivated derivatives; putative transposase for insertion sequenceelement IS986/IS6110 complement(89196..89450) Bifidobacterium bifidum BGN4 13070580 YP_006393549.1 CDS BBB_0073 NC_017999.1 89525 89809 D COG1484:DNA replication protein; insertion sequence IS5376, putative ATP-binding protein 89525..89809 Bifidobacterium bifidum BGN4 13070581 YP_006393550.1 CDS BBB_0074 NC_017999.1 90258 90602 R COG3464:Transposase and inactivated derivatives; transposase for insertion sequence elementIS1557 complement(90258..90602) Bifidobacterium bifidum BGN4 13070582 YP_006393551.1 CDS BBB_0075 NC_017999.1 90808 91215 R hypothetical protein complement(90808..91215) Bifidobacterium bifidum BGN4 13070583 YP_006393552.1 CDS glgP NC_017999.1 91552 94005 D COG0058:Glucan phosphorylase; glycogen phosphorylase 91552..94005 Bifidobacterium bifidum BGN4 13070584 YP_006393553.1 CDS BBB_0077 NC_017999.1 94174 94416 R hypothetical protein complement(94174..94416) Bifidobacterium bifidum BGN4 13070585 YP_006393554.1 CDS BBB_0078 NC_017999.1 94724 94945 R hypothetical protein complement(94724..94945) Bifidobacterium bifidum BGN4 13070586 YP_006393555.1 CDS BBB_0079 NC_017999.1 95045 95917 D COG0705:Uncharacterized membrane protein (homologof Drosophila rhomboid); membrane spanning protein 95045..95917 Bifidobacterium bifidum BGN4 13070587 YP_006393556.1 CDS BBB_0080 NC_017999.1 95949 96650 D COG2801:Transposase and inactivated derivatives; putative transposase for insertion sequenceelement IS1353 95949..96650 Bifidobacterium bifidum BGN4 13070588 YP_006393557.1 CDS BBB_0081 NC_017999.1 96871 98199 D SAM-dependent methyl transferase 96871..98199 Bifidobacterium bifidum BGN4 13070589 YP_006393558.1 CDS BBB_0082 NC_017999.1 98324 98764 R hypothetical protein complement(98324..98764) Bifidobacterium bifidum BGN4 13070590 YP_006393559.1 CDS BBB_0083 NC_017999.1 98842 99630 D COG3879:Uncharacterized protein conserved inbacteria; membrane spanning protein 98842..99630 Bifidobacterium bifidum BGN4 13070591 YP_006393560.1 CDS srtA NC_017999.1 99627 100856 D COG3764:Sortase (surface protein transpeptidase); sortase (surface protein transpeptidase) 99627..100856 Bifidobacterium bifidum BGN4 13070592 YP_006393561.1 CDS pabA NC_017999.1 100952 101596 D COG0512:Anthranilate/para-aminobenzoate synthases component II; para-aminobenzoate synthase glutamineamido transferase component II 100952..101596 Bifidobacterium bifidum BGN4 13070593 YP_006393562.1 CDS pknB NC_017999.1 101836 103893 R COG0515:Serine/threonine protein kinase; putative serine/threonine- protein kinase complement(101836..103893) Bifidobacterium bifidum BGN4 13070594 YP_006393563.1 CDS pknA NC_017999.1 103896 104879 R COG0515:Serine/threonine protein kinase; putative serine/threonine- protein kinase complement(103896..104879) Bifidobacterium bifidum BGN4 13070595 YP_006393564.1 CDS mrdA NC_017999.1 104876 106342 R COG0768:Cell division proteinFtsI/penicillin-binding protein 2; penicillin-binding protein complement(104876..106342) Bifidobacterium bifidum BGN4 13070596 YP_006393565.1 CDS ftsW NC_017999.1 106339 107817 R COG0772:Bacterial cell division membrane protein; putative cell division protein complement(106339..107817) Bifidobacterium bifidum BGN4 13070597 YP_006393566.1 CDS prpC NC_017999.1 107814 109472 R COG0631:Serine/threonine protein phosphatase; protein phosphatase complement(107814..109472) Bifidobacterium bifidum BGN4 13070598 YP_006393567.1 CDS BBB_0091 NC_017999.1 109479 110021 R COG1716:FOG: FHA domain; hypothetical protein complement(109479..110021) Bifidobacterium bifidum BGN4 13070599 YP_006393568.1 CDS BBB_0092 NC_017999.1 110049 110750 R COG1716:FOG: FHA domain; FHA domain-containing protein complement(110049..110750) Bifidobacterium bifidum BGN4 13070600 YP_006393569.1 CDS BBB_0093 NC_017999.1 110999 113521 D COG1506:Dipeptidylaminopeptidases/acylaminoacyl- peptidases; dipeptidyl peptidase 110999..113521 Bifidobacterium bifidum BGN4 13070601 YP_006393570.1 CDS pip NC_017999.1 113749 116571 D COG1511:Predicted membrane protein; phage infection protein 113749..116571 Bifidobacterium bifidum BGN4 13070602 YP_006393571.1 CDS pip NC_017999.1 116568 118895 D COG1511:Predicted membrane protein; phage infection protein 116568..118895 Bifidobacterium bifidum BGN4 13070603 YP_006393572.1 CDS pldB NC_017999.1 119049 120104 D COG2267:Lysophospholipase; Lysophospholipase L2 119049..120104 Bifidobacterium bifidum BGN4 13070604 YP_006393573.1 CDS yicL NC_017999.1 120176 121117 D COG0697:Permeases of the drug/metabolite transporter (DMT) superfamily; putative inner membrane transporter 120176..121117 Bifidobacterium bifidum BGN4 13070605 YP_006393574.1 CDS BBB_0098 NC_017999.1 121588 122136 D hypothetical protein 121588..122136 Bifidobacterium bifidum BGN4 13070606 YP_006393575.1 CDS BBB_0099 NC_017999.1 122215 122715 D hypothetical protein 122215..122715 Bifidobacterium bifidum BGN4 13070607 YP_006393576.1 CDS msrAB NC_017999.1 122817 123821 D COG0225:Peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 122817..123821 Bifidobacterium bifidum BGN4 13070608 YP_006393577.1 CDS BBB_0101 NC_017999.1 123826 124326 R hypothetical protein complement(123826..124326) Bifidobacterium bifidum BGN4 13070609 YP_006393578.1 CDS BBB_0102 NC_017999.1 124676 127861 R COG1061:DNA or RNA helicases of superfamily II; putative ATP-dependent helicase complement(124676..127861) Bifidobacterium bifidum BGN4 13070610 YP_006393579.1 CDS nudG NC_017999.1 127858 128307 R COG0494:NTP pyrophosphohydrolases includingoxidative damage repair enzymes; CTP pyrophosphohydrolase complement(127858..128307) Bifidobacterium bifidum BGN4 13070611 YP_006393580.1 CDS BBB_0104 NC_017999.1 128524 128922 R hypothetical protein complement(128524..128922) Bifidobacterium bifidum BGN4 13070612 YP_006393581.1 CDS BBB_0105 NC_017999.1 128995 129315 D COG0463:Glycosyl transferases involved in cell wallbiogenesis; glycosyl transferase family protein 128995..129315 Bifidobacterium bifidum BGN4 13070613 YP_006393582.1 CDS BBB_0106 NC_017999.1 129358 129690 D COG0393:Uncharacterized conserved protein; hypothetical protein 129358..129690 Bifidobacterium bifidum BGN4 13070614 YP_006393583.1 CDS bloH NC_017999.1 129812 130630 D COG0596:Predicted hydrolases or acyl transferases(alpha/beta hydrolase superfamily); carboxylesterase 129812..130630 Bifidobacterium bifidum BGN4 13070615 YP_006393584.1 CDS BBB_0108 NC_017999.1 130803 131120 D GCN5- related N-acetyl transferase 130803..131120 Bifidobacterium bifidum BGN4 13070616 YP_006393585.1 CDS tnpB NC_017999.1 132095 132445 D COG2801:Transposase and inactivated derivatives; transposase subunit B 132095..132445 Bifidobacterium bifidum BGN4 13070617 YP_006393586.1 CDS xerC NC_017999.1 132765 133154 R COG0582:Integrase; putative tyrosine recombinase complement(132765..133154) Bifidobacterium bifidum BGN4 13070618 YP_006393587.1 CDS BBB_0111 NC_017999.1 133365 133760 R hypothetical protein complement(133365..133760) Bifidobacterium bifidum BGN4 13070619 YP_006393588.1 CDS BBB_0112 NC_017999.1 134239 134436 R hypothetical protein complement(134239..134436) Bifidobacterium bifidum BGN4 13070620 YP_006393589.1 CDS hgiDIR NC_017999.1 134539 135747 D type II restriction enzyme 134539..135747 Bifidobacterium bifidum BGN4 13070621 YP_006393590.1 CDS hgiDIM NC_017999.1 135744 136712 R COG0270:Site-specific DNA methylase; modification methylase complement(135744..136712) Bifidobacterium bifidum BGN4 13070622 YP_006393591.1 CDS BBB_0115 NC_017999.1 137104 137379 R hypothetical protein complement(137104..137379) Bifidobacterium bifidum BGN4 13070623 YP_006393592.1 CDS BBB_0117 NC_017999.1 139123 139362 D hypothetical protein 139123..139362 Bifidobacterium bifidum BGN4 13070625 YP_006393593.1 CDS tgt NC_017999.1 139697 140998 R COG0343:Queuine/archaeosinetRNA-ribosyl transferase; queuine tRNA-ribosyl transferase complement(139697..140998) Bifidobacterium bifidum BGN4 13070627 YP_006393594.1 CDS degP NC_017999.1 141366 143276 D COG0265:Trypsin-like serine proteases, typicallyperiplasmic, contain C-terminal PDZ domain; putative serine protease 141366..143276 Bifidobacterium bifidum BGN4 13070628 YP_006393595.1 CDS ziaA NC_017999.1 143655 145856 D COG2217:Cation transport ATPase; zinc-transporting ATPase 143655..145856 Bifidobacterium bifidum BGN4 13070629 YP_006393596.1 CDS dare NC_017999.1 146027 147478 D COG0493:NADPH-dependent glutamate synthase betachain and related oxidoreductases; NADPH:adrenodoxin oxidoreductase 146027..147478 Bifidobacterium bifidum BGN4 13070630 YP_006393597.1 CDS htpX NC_017999.1 147650 148588 D COG0501:Zn-dependent protease with chaperonefunction; putative heat shock protein 147650..148588 Bifidobacterium bifidum BGN4 13070631 YP_006393598.1 CDS BBB_0123 NC_017999.1 149050 150783 D COG2865:Predicted transcriptional regulatorcontaining an HTH domain and an uncharacterized domainshared wi; transcriptional regulator 149050..150783 Bifidobacterium bifidum BGN4 13070633 YP_006393599.1 CDS BBB_0124 NC_017999.1 150784 150918 R hypothetical protein complement(150784..150918) Bifidobacterium bifidum BGN4 13070634 YP_006393600.1 CDS BBB_0125 NC_017999.1 151240 151560 D hypothetical protein 151240..151560 Bifidobacterium bifidum BGN4 13070635 YP_006393601.1 CDS BBB_0126 NC_017999.1 151671 152342 R hypothetical protein complement(151671..152342) Bifidobacterium bifidum BGN4 13070636 YP_006393602.1 CDS BBB_0127 NC_017999.1 152339 152722 R hypothetical protein complement(152339..152722) Bifidobacterium bifidum BGN4 13070637 YP_006393603.1 CDS BBB_0128 NC_017999.1 152737 153084 R hypothetical protein complement(152737..153084) Bifidobacterium bifidum BGN4 13070638 YP_006393604.1 CDS BBB_0129 NC_017999.1 153087 153455 R hypothetical protein complement(153087..153455) Bifidobacterium bifidum BGN4 13070639 YP_006393605.1 CDS BBB_0130 NC_017999.1 153653 153955 R hypothetical protein complement(153653..153955) Bifidobacterium bifidum BGN4 13070640 YP_006393606.1 CDS yqaE NC_017999.1 154266 154607 R COG1396:Predicted transcriptional regulators; putative HTH-type transcriptional regulator complement(154266..154607) Bifidobacterium bifidum BGN4 13070641 YP_006393607.1 CDS nodB NC_017999.1 154974 156221 R COG0726:Predicted xylanase/chitin deacetylase; chitooligosaccharide deacetylase complement(154974..156221) Bifidobacterium bifidum BGN4 13070642 YP_006393608.1 CDS fbaA NC_017999.1 156408 157475 D COG0191:Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 156408..157475 Bifidobacterium bifidum BGN4 13070643 YP_006393609.1 CDS purA NC_017999.1 157765 159051 D COG0104:Adenylosuccinate synthase; adenylosuccinate synthetase 157765..159051 Bifidobacterium bifidum BGN4 13070644 YP_006393610.1 CDS crcB NC_017999.1 159126 160070 D COG0239:Integral membrane protein possibly involvedin chromosome condensation; Integral membrane protein for chromosomecondensation 159126..160070 Bifidobacterium bifidum BGN4 13070645 YP_006393611.1 CDS crcB NC_017999.1 160072 160440 D COG0239:Integral membrane protein possibly involvedin chromosome condensation; integral membrane protein for chromosomecondensation 160072..160440 Bifidobacterium bifidum BGN4 13070646 YP_006393612.1 CDS rbsR NC_017999.1 160600 161646 D COG1609:Transcriptional regulators; ribose operon repressor 160600..161646 Bifidobacterium bifidum BGN4 13070647 YP_006393613.1 CDS BBB_0138 NC_017999.1 161729 162160 D COG0366:Glycosidases; sucrose phosphorylase 161729..162160 Bifidobacterium bifidum BGN4 13070648 YP_006393614.1 CDS BBB_0139 NC_017999.1 162211 163896 D COG0477:Permeases of the major facilitatorsuperfamily; putative transmembrane protein 162211..163896 Bifidobacterium bifidum BGN4 13070649 YP_006393615.1 CDS yhjE NC_017999.1 164547 165857 D COG0477:Permeases of the major facilitatorsuperfamily; inner membrane metabolite transport protein 164547..165857 Bifidobacterium bifidum BGN4 13070650 YP_006393616.1 CDS ilvC NC_017999.1 166103 167155 D COG0059:Ketol-acid reductoisomerase; ketol-acid reductoisomerase 166103..167155 Bifidobacterium bifidum BGN4 13070651 YP_006393617.1 CDS BBB_0142 NC_017999.1 167244 167357 R hypothetical protein complement(167244..167357) Bifidobacterium bifidum BGN4 13070652 YP_006393618.1 CDS ilvC NC_017999.1 167574 168626 D COG0059:Ketol-acid reductoisomerase; ketol-acid reductoisomerase 167574..168626 Bifidobacterium bifidum BGN4 13070653 YP_006393619.1 CDS BBB_0144 NC_017999.1 169063 170052 R hypothetical protein complement(169063..170052) Bifidobacterium bifidum BGN4 13070654 YP_006393620.1 CDS lacZ NC_017999.1 170425 174300 R COG3250:Beta-galactosidase/beta-glucuronidase; beta-galactosidase complement(170425..174300) Bifidobacterium bifidum BGN4 13070655 YP_006393621.1 CDS BBB_0146 NC_017999.1 174436 174579 R hypothetical protein complement(174436..174579) Bifidobacterium bifidum BGN4 13070656 YP_006393622.1 CDS ansP NC_017999.1 174597 176078 R COG1113:Gamma-aminobutyrate permease and relatedpermeases; aromatic amino acid transport protein complement(174597..176078) Bifidobacterium bifidum BGN4 13070657 YP_006393623.1 CDS yxbF NC_017999.1 176834 177403 R COG1309:Transcriptional regulator; putative HTH-type transcriptional regulator complement(176834..177403) Bifidobacterium bifidum BGN4 13070658 YP_006393624.1 CDS BBB_0149 NC_017999.1 177541 178242 D COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; ABC transporter ATP-binding protein 177541..178242 Bifidobacterium bifidum BGN4 13070659 YP_006393625.1 CDS BBB_0150 NC_017999.1 178251 181670 D COG0577:ABC-type antimicrobial peptide transportsystem, permease component; putative transmembrane protein 178251..181670 Bifidobacterium bifidum BGN4 13070660 YP_006393626.1 CDS BBB_0151 NC_017999.1 181687 182166 R COG1576:Uncharacterized conserved protein; hypothetical protein complement(181687..182166) Bifidobacterium bifidum BGN4 13070661 YP_006393627.1 CDS upp NC_017999.1 182398 183039 R COG0035:Uracil phosphoribosyl transferase; uracil phosphoribosyl transferase complement(182398..183039) Bifidobacterium bifidum BGN4 13070662 YP_006393628.1 CDS BBB_0153 NC_017999.1 183205 183459 D COG0410:ABC-type branched-chain amino acidtransport systems, ATPase component; ABC transporter ATP-binding protein 183205..183459 Bifidobacterium bifidum BGN4 13070663 YP_006393629.1 CDS bcp NC_017999.1 183534 184091 R COG1225:Peroxiredoxin; putative peroxiredoxin complement(183534..184091) Bifidobacterium bifidum BGN4 13070664 YP_006393630.1 CDS yhjD NC_017999.1 184179 185069 D COG1295:Predicted membrane protein; inner membrane protein 184179..185069 Bifidobacterium bifidum BGN4 13070665 YP_006393631.1 CDS grxC NC_017999.1 185219 185467 D COG0695:Glutaredoxin and related proteins; glutaredoxin 185219..185467 Bifidobacterium bifidum BGN4 13070666 YP_006393632.1 CDS BBB_0157 NC_017999.1 185824 186588 R COG3464:Transposase and inactivated derivatives; transposase for insertion sequence elementIS1557 complement(185824..186588) Bifidobacterium bifidum BGN4 13070667 YP_006393633.1 CDS BBB_0158 NC_017999.1 187323 189791 D COG1409:Predicted phosphohydrolases; hypothetical protein 187323..189791 Bifidobacterium bifidum BGN4 13070161 YP_006393634.1 CDS BBB_0159 NC_017999.1 189866 190087 D hypothetical protein 189866..190087 Bifidobacterium bifidum BGN4 13070162 YP_006393635.1 CDS bgaB NC_017999.1 190263 192443 D COG1874:Beta-galactosidase; beta-galactosidase 190263..192443 Bifidobacterium bifidum BGN4 13070163 YP_006393636.1 CDS hphIR NC_017999.1 192756 193196 R COG3440:Predicted restriction endonuclease; type II restriction enzyme complement(192756..193196) Bifidobacterium bifidum BGN4 13070164 YP_006393637.1 CDS BBB_0162 NC_017999.1 193128 194531 D COG2865:Predicted transcriptional regulatorcontaining an HTH domain and an uncharacterized domainshared wi; transcriptional regulator 193128..194531 Bifidobacterium bifidum BGN4 13070165 YP_006393638.1 CDS qacA NC_017999.1 195576 197144 D COG0477:Permeases of the major facilitatorsuperfamily; antiseptic resistance protein 195576..197144 Bifidobacterium bifidum BGN4 13070166 YP_006393639.1 CDS BBB_0164 NC_017999.1 197160 197405 D hypothetical protein 197160..197405 Bifidobacterium bifidum BGN4 13070167 YP_006393640.1 CDS BBB_0165 NC_017999.1 197380 198138 R COG2801:Transposase and inactivated derivatives; transposase for insertion sequence elementIS904 complement(197380..198138) Bifidobacterium bifidum BGN4 13070168 YP_006393641.1 CDS BBB_0166 NC_017999.1 198141 198428 R COG2963:Transposase and inactivated derivatives; transposase IS3/IS911 complement(198141..198428) Bifidobacterium bifidum BGN4 13070169 YP_006393642.1 CDS BBB_0167 NC_017999.1 198852 199487 D COG1309:Transcriptional regulator; putative TetR-type transcriptional regulator 198852..199487 Bifidobacterium bifidum BGN4 13070170 YP_006393643.1 CDS BBB_0168 NC_017999.1 199496 200149 D hypothetical protein 199496..200149 Bifidobacterium bifidum BGN4 13070171 YP_006393644.1 CDS BBB_0169 NC_017999.1 200798 200998 R membrane-anchored glycerophosphoryl diesterphosphodiesterase complement(200798..200998) Bifidobacterium bifidum BGN4 13070173 YP_006393645.1 CDS BBB_0170 NC_017999.1 201017 201787 D chitinase A 201017..201787 Bifidobacterium bifidum BGN4 13070174 YP_006393646.1 CDS yccK NC_017999.1 202023 203015 D COG0667:Predicted oxidoreductases ( related toaryl-alcohol dehydrogenases); putative oxidoreductase 202023..203015 Bifidobacterium bifidum BGN4 13070175 YP_006393647.1 CDS BBB_0172 NC_017999.1 203061 203405 R COG0454:Histone acetyl transferase HPA2 and relatedacetyl transferases; GCN5- related N-acetyl transferase complement(203061..203405) Bifidobacterium bifidum BGN4 13070176 YP_006393648.1 CDS BBB_0173 NC_017999.1 203895 204425 D COG1846:Transcriptional regulators; putative MarR-type transcriptional regulator 203895..204425 Bifidobacterium bifidum BGN4 13070177 YP_006393649.1 CDS mdlB NC_017999.1 204644 206527 D COG1132:ABC-type multidrug transport system, ATPaseand permease components; ABC transporter ATP-binding protein 204644..206527 Bifidobacterium bifidum BGN4 13070178 YP_006393650.1 CDS BBB_0175 NC_017999.1 206578 208518 D COG1132:ABC-type multidrug transport system, ATPaseand permease components; ABC transporter ATP-binding protein 206578..208518 Bifidobacterium bifidum BGN4 13070179 YP_006393651.1 CDS BBB_0176 NC_017999.1 209351 215230 D alpha-L-fucosidase 209351..215230 Bifidobacterium bifidum BGN4 13070180 YP_006393652.1 CDS BBB_0177 NC_017999.1 215406 215957 D COG1881:Phospholipid-binding protein; phospholipid-binding protein 215406..215957 Bifidobacterium bifidum BGN4 13070181 YP_006393653.1 CDS pepDA NC_017999.1 216082 217695 D COG4690:Dipeptidase; putative dipeptidase A 216082..217695 Bifidobacterium bifidum BGN4 13070182 YP_006393654.1 CDS fhs NC_017999.1 217788 219305 D COG2759:Formyltetrahydrofolate synthetase; formate--tetrahydrofolate ligase 217788..219305 Bifidobacterium bifidum BGN4 13070183 YP_006393655.1 CDS BBB_0180 NC_017999.1 219700 220047 R hypothetical protein complement(219700..220047) Bifidobacterium bifidum BGN4 13070184 YP_006393656.1 CDS gtrA NC_017999.1 220184 220741 D bactoprenol-linked glucose translocase 220184..220741 Bifidobacterium bifidum BGN4 13070185 YP_006393657.1 CDS BBB_0182 NC_017999.1 220833 222332 R COG0477:Permeases of the major facilitatorsuperfamily; hypothetical protein complement(220833..222332) Bifidobacterium bifidum BGN4 13070186 YP_006393658.1 CDS BBB_0183 NC_017999.1 222669 223328 D COG0406:Fructose-2,6-bisphosphatase; phosphoglycerate mutase 222669..223328 Bifidobacterium bifidum BGN4 13070187 YP_006393659.1 CDS BBB_0184 NC_017999.1 223576 224499 D hypothetical protein 223576..224499 Bifidobacterium bifidum BGN4 13070188 YP_006393660.1 CDS BBB_0185 NC_017999.1 224776 225561 R COG0600:ABC-type nitrate/sulfonate/bicarbonatetransport system, permease component; ABC transporter permease complement(224776..225561) Bifidobacterium bifidum BGN4 13070189 YP_006393661.1 CDS BBB_0186 NC_017999.1 225824 226891 R COG0715:ABC-type nitrate/sulfonate/bicarbonatetransport systems, periplasmic components; putative solute binding protein of ABC transporter complement(225824..226891) Bifidobacterium bifidum BGN4 13070190 YP_006393662.1 CDS BBB_0187 NC_017999.1 227319 227981 D COG0637:Predicted phosphatase/phosphohexomutase; phosphoglycolate phosphatase 227319..227981 Bifidobacterium bifidum BGN4 13070191 YP_006393663.1 CDS gltX NC_017999.1 229437 230966 D COG0008:Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase 229437..230966 Bifidobacterium bifidum BGN4 13070192 YP_006393664.1 CDS BBB_0189 NC_017999.1 231392 231868 R putative AAA+ superfamily ATPase complement(231392..231868) Bifidobacterium bifidum BGN4 13070193 YP_006393665.1 CDS BBB_0190 NC_017999.1 232992 234281 D COG1409:Predicted phosphohydrolases; putative phosphohydrolase 232992..234281 Bifidobacterium bifidum BGN4 13070196 YP_006393666.1 CDS kipR NC_017999.1 234424 235278 R COG1414:Transcriptional regulator; HTH-type transcriptional regulator complement(234424..235278) Bifidobacterium bifidum BGN4 13070197 YP_006393667.1 CDS leuC NC_017999.1 235553 236956 D COG0065:3-isopropylmalate dehydratase large subunit; 3-isopropylmalate dehydratase large subunit 235553..236956 Bifidobacterium bifidum BGN4 13070198 YP_006393668.1 CDS leuD NC_017999.1 237104 237796 D COG0066:3-isopropylmalate dehydratase small subunit; 3-isopropylmalate dehydratase small subunit 237104..237796 Bifidobacterium bifidum BGN4 13070199 YP_006393669.1 CDS BBB_0194 NC_017999.1 238075 241974 D COG0553:Superfamily II DNA/RNA helicases, SNF2family; putative ATP-dependent helicase 238075..241974 Bifidobacterium bifidum BGN4 13070200 YP_006393670.1 CDS BBB_0195 NC_017999.1 242049 242429 D hypothetical protein 242049..242429 Bifidobacterium bifidum BGN4 13070201 YP_006393671.1 CDS BBB_0196 NC_017999.1 242995 244425 D putative metal-dependent membrane protease 242995..244425 Bifidobacterium bifidum BGN4 13070202 YP_006393672.1 CDS pyrD NC_017999.1 244552 245703 D dihydroorotate dehydrogenase 244552..245703 Bifidobacterium bifidum BGN4 13070203 YP_006393673.1 CDS murA NC_017999.1 245982 247307 D COG0766:UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine1-carboxyvinyl transferase 245982..247307 Bifidobacterium bifidum BGN4 13070204 YP_006393674.1 CDS BBB_0199 NC_017999.1 247404 248747 R COG0477:Permeases of the major facilitatorsuperfamily; ABC transporter permease complement(247404..248747) Bifidobacterium bifidum BGN4 13070205 YP_006393675.1 CDS BBB_0200 NC_017999.1 248970 249680 R COG1309:Transcriptional regulator; putative TetR-type transcriptional regulator complement(248970..249680) Bifidobacterium bifidum BGN4 13070206 YP_006393676.1 CDS BBB_0201 NC_017999.1 249829 250803 D hypothetical protein 249829..250803 Bifidobacterium bifidum BGN4 13070207 YP_006393677.1 CDS rplK NC_017999.1 251128 251559 D COG0080:Ribosomal protein L11; 50S ribosomal protein L11 251128..251559 Bifidobacterium bifidum BGN4 13070208 YP_006393678.1 CDS rplA NC_017999.1 251574 252266 D COG0081:Ribosomal protein L1; 50S ribosomal protein L1 251574..252266 Bifidobacterium bifidum BGN4 13070209 YP_006393679.1 CDS fkbP NC_017999.1 252521 253510 R COG0545:FKBP-type peptidyl-prolyl cis-transisomerases 1; putative secreted peptidyl-prolyl cis-transisomerase protein complement(252521..253510) Bifidobacterium bifidum BGN4 13070210 YP_006393680.1 CDS BBB_0205 NC_017999.1 253685 254674 D asp-tRNAAsn/Glu-tRNAGln amido transferase A subunit 253685..254674 Bifidobacterium bifidum BGN4 13070211 YP_006393681.1 CDS BBB_0206 NC_017999.1 254667 255680 D hypothetical protein 254667..255680 Bifidobacterium bifidum BGN4 13070212 YP_006393682.1 CDS BBB_0207 NC_017999.1 255802 255915 D hypothetical protein 255802..255915 Bifidobacterium bifidum BGN4 13070213 YP_006393683.1 CDS BBB_0208 NC_017999.1 255929 256915 D COG3118:Thioredoxin domain-containing protein; thioredoxin 255929..256915 Bifidobacterium bifidum BGN4 13070214 YP_006393684.1 CDS BBB_0209 NC_017999.1 257014 257640 R COG2954:Uncharacterized protein conserved inbacteria; adenylate cyclase complement(257014..257640) Bifidobacterium bifidum BGN4 13070215 YP_006393685.1 CDS cytR NC_017999.1 258140 259156 R COG1609:Transcriptional regulators; HTH-type transcriptional repressor complement(258140..259156) Bifidobacterium bifidum BGN4 13070217 YP_006393686.1 CDS BBB_0211 NC_017999.1 259349 259489 D COG4948:L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; RTS beta protein 259349..259489 Bifidobacterium bifidum BGN4 13070218 YP_006393687.1 CDS menC NC_017999.1 259614 260114 D COG4948:L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; putative mandelate racemase 259614..260114 Bifidobacterium bifidum BGN4 13070219 YP_006393688.1 CDS BBB_0213 NC_017999.1 260177 261040 D COG1028:Dehydrogenases with different specificities( related to short-chain alcohol dehydrogenases); 3-oxoacyl-ACP reductase 260177..261040 Bifidobacterium bifidum BGN4 13070220 YP_006393689.1 CDS BBB_0214 NC_017999.1 260992 261432 D hypothetical protein 260992..261432 Bifidobacterium bifidum BGN4 13070221 YP_006393690.1 CDS BBB_0215 NC_017999.1 261680 263932 D lacto-N-biose phosphorylase 261680..263932 Bifidobacterium bifidum BGN4 13070222 YP_006393691.1 CDS BBB_0216 NC_017999.1 263969 264094 D hypothetical protein 263969..264094 Bifidobacterium bifidum BGN4 13070223 YP_006393692.1 CDS BBB_0217 NC_017999.1 264157 264546 D COG0251:Putative translation initiationinhibitor, yjgF family; plastid-lipid associated protein 264157..264546 Bifidobacterium bifidum BGN4 13070224 YP_006393693.1 CDS gde NC_017999.1 265140 266201 D COG0584:Glycerophosphoryl diesterphosphodiesterase; glycerophosphodiester phosphodiesterase 265140..266201 Bifidobacterium bifidum BGN4 13070225 YP_006393694.1 CDS argS NC_017999.1 266271 268067 D COG0018:Arginyl-tRNA synthetase; arginyl-tRNA synthetase 266271..268067 Bifidobacterium bifidum BGN4 13070226 YP_006393695.1 CDS lysA NC_017999.1 268233 269861 D COG0019:Diaminopimelate decarboxylase; diaminopimelate decarboxylase 268233..269861 Bifidobacterium bifidum BGN4 13070227 YP_006393696.1 CDS exp5 NC_017999.1 269978 270484 R COG2190:Phospho transferase system IIA components; PTS system glucose-specific transporter subunit IICBA complement(269978..270484) Bifidobacterium bifidum BGN4 13070228 YP_006393697.1 CDS nagE NC_017999.1 270481 272031 R COG1263:Phospho transferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; PTS system N-acetylglucosamine-specific transporter subunit IICBA complement(270481..272031) Bifidobacterium bifidum BGN4 13070229 YP_006393698.1 CDS hom NC_017999.1 272507 273820 D COG0460:Homoserine dehydrogenase; Homoserine dehydrogenase 272507..273820 Bifidobacterium bifidum BGN4 13070230 YP_006393699.1 CDS thrB NC_017999.1 273968 274966 D COG0083:Homoserine kinase; homoserine kinase 273968..274966 Bifidobacterium bifidum BGN4 13070231 YP_006393700.1 CDS maf NC_017999.1 275079 276515 D COG0424:Nucleotide-binding protein implicated ininhibition of septum formation; Maf-like/Nudix hydrolase 275079..276515 Bifidobacterium bifidum BGN4 13070232 YP_006393701.1 CDS BBB_0226 NC_017999.1 276519 276899 R hypothetical protein complement(276519..276899) Bifidobacterium bifidum BGN4 13070233 YP_006393702.1 CDS BBB_0227 NC_017999.1 276899 277261 R hypothetical protein complement(276899..277261) Bifidobacterium bifidum BGN4 13070234 YP_006393703.1 CDS lolD NC_017999.1 277560 278516 D COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; lipo protein-releasing system ATP-binding protein 277560..278516 Bifidobacterium bifidum BGN4 13070235 YP_006393704.1 CDS BBB_0229 NC_017999.1 278513 279967 D phospho transferase system, mannitol-specificIIBC component 278513..279967 Bifidobacterium bifidum BGN4 13070236 YP_006393705.1 CDS BBB_0230 NC_017999.1 280042 280986 R COG0679:Predicted permeases; putative transport integral membrane protein complement(280042..280986) Bifidobacterium bifidum BGN4 13070237 YP_006393706.1 CDS dapE NC_017999.1 281227 282459 D COG0624:Acetylornithinedeacetylase/Succinyl- diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase 281227..282459 Bifidobacterium bifidum BGN4 13070238 YP_006393707.1 CDS BBB_0232 NC_017999.1 282531 282692 R hypothetical protein complement(282531..282692) Bifidobacterium bifidum BGN4 13070239 YP_006393708.1 CDS rng NC_017999.1 282939 285821 D COG1530:Ribonucleases G and E; ribonuclease G 282939..285821 Bifidobacterium bifidum BGN4 13070240 YP_006393709.1 CDS rplU NC_017999.1 285988 286296 D COG0261:Ribosomal protein L21; 50S ribosomal protein L21 285988..286296 Bifidobacterium bifidum BGN4 13070241 YP_006393710.1 CDS rpmA NC_017999.1 286321 286572 D COG0211:Ribosomal protein L27; 50S ribosomal protein L27 286321..286572 Bifidobacterium bifidum BGN4 13070242 YP_006393711.1 CDS BBB_0236 NC_017999.1 287021 287971 R CTP synthase complement(287021..287971) Bifidobacterium bifidum BGN4 13070243 YP_006393712.1 CDS cgtA NC_017999.1 288503 290188 D COG0536:Predicted GTPase; GTP-binding protein 288503..290188 Bifidobacterium bifidum BGN4 13070244 YP_006393713.1 CDS proB NC_017999.1 290378 291511 D COG0263:Glutamate 5-kinase; glutamate 5-kinase 290378..291511 Bifidobacterium bifidum BGN4 13070245 YP_006393714.1 CDS aspC NC_017999.1 291599 292804 D COG0436:Aspartate/tyrosine/aromaticamino transferase; aspartate amino transferase 291599..292804 Bifidobacterium bifidum BGN4 13070246 YP_006393715.1 CDS secE NC_017999.1 293092 293319 D COG0690:Pre protein translocase subunit SecE; pre protein translocase, SecE subunit 293092..293319 Bifidobacterium bifidum BGN4 13070248 YP_006393716.1 CDS nusG NC_017999.1 293349 294191 D COG0250:Transcription antiterminator; transcription termination/antitermination factor 293349..294191 Bifidobacterium bifidum BGN4 13070249 YP_006393717.1 CDS plsC NC_017999.1 294297 295181 D COG0204:1-acyl-sn-glycerol-3-phosphateacyl transferase; putative acyl transferase 294297..295181 Bifidobacterium bifidum BGN4 13070250 YP_006393718.1 CDS gpsA NC_017999.1 295302 296297 D COG0240:Glycerol-3-phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase 295302..296297 Bifidobacterium bifidum BGN4 13070251 YP_006393719.1 CDS BBB_0244 NC_017999.1 296284 296592 R ABC transporter ATP-binding protein complement(296284..296592) Bifidobacterium bifidum BGN4 13070252 YP_006393720.1 CDS ddl NC_017999.1 296533 297678 D COG1181:D-alanine-D-alanine ligase and relatedATP-grasp enzymes; D-alanine--D-alanine ligase 296533..297678 Bifidobacterium bifidum BGN4 13070253 YP_006393721.1 CDS BBB_0246 NC_017999.1 297708 298739 D COG0584:Glycerophosphoryl diesterphosphodiesterase; putative phosphodiesterase 297708..298739 Bifidobacterium bifidum BGN4 13070254 YP_006393722.1 CDS BBB_0247 NC_017999.1 298835 298960 R hypothetical protein complement(298835..298960) Bifidobacterium bifidum BGN4 13070255 YP_006393723.1 CDS BBB_0248 NC_017999.1 299307 305042 D endo-alpha-N-acetylgalactosaminidase 299307..305042 Bifidobacterium bifidum BGN4 13070256 YP_006393724.1 CDS prs NC_017999.1 305177 306190 R COG0462:Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase complement(305177..306190) Bifidobacterium bifidum BGN4 13070257 YP_006393725.1 CDS BBB_0250 NC_017999.1 306381 309635 R heme utilization or adhesion related exo protein complement(306381..309635) Bifidobacterium bifidum BGN4 13070258 YP_006393726.1 CDS BBB_0251 NC_017999.1 309816 310544 R hypothetical protein complement(309816..310544) Bifidobacterium bifidum BGN4 13070259 YP_006393727.1 CDS BBB_0252 NC_017999.1 310710 312164 D hypothetical protein 310710..312164 Bifidobacterium bifidum BGN4 13070260 YP_006393728.1 CDS rpsF NC_017999.1 312318 312614 D COG0360:Ribosomal protein S6; 30S ribosomal protein S6 312318..312614 Bifidobacterium bifidum BGN4 13070261 YP_006393729.1 CDS ssb NC_017999.1 312672 313355 D COG0629:Single-stranded DNA-binding protein; single-stranded DNA-binding protein 312672..313355 Bifidobacterium bifidum BGN4 13070262 YP_006393730.1 CDS rpsR NC_017999.1 313441 313689 D COG0238:Ribosomal protein S18; 30S ribosomal protein S18 313441..313689 Bifidobacterium bifidum BGN4 13070263 YP_006393731.1 CDS rplI NC_017999.1 313707 314153 D COG0359:Ribosomal protein L9; 50S ribosomal protein L9 313707..314153 Bifidobacterium bifidum BGN4 13070264 YP_006393732.1 CDS BBB_0257 NC_017999.1 314620 314844 D hypothetical protein 314620..314844 Bifidobacterium bifidum BGN4 13070265 YP_006393733.1 CDS BBB_0258 NC_017999.1 315084 315833 D hypothetical protein 315084..315833 Bifidobacterium bifidum BGN4 13070266 YP_006393734.1 CDS BBB_0259 NC_017999.1 315830 316354 D chitinase A 315830..316354 Bifidobacterium bifidum BGN4 13070267 YP_006393735.1 CDS glpF NC_017999.1 317237 317968 D COG0580:Glycerol uptake facilitator and relatedpermeases (Major Intrinsic protein Family); putative glycerol uptake facilitator protein 317237..317968 Bifidobacterium bifidum BGN4 13070269 YP_006393736.1 CDS BBB_0261 NC_017999.1 318169 318987 D putative lipo protein 318169..318987 Bifidobacterium bifidum BGN4 13070270 YP_006393737.1 CDS gluQ NC_017999.1 318876 320165 D COG0008:Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-Q tRNA(Asp) synthetase 318876..320165 Bifidobacterium bifidum BGN4 13070271 YP_006393738.1 CDS BBB_0263 NC_017999.1 320342 321166 D COG0325:Predicted enzyme with a TIM-barrel fold; hypothetical protein 320342..321166 Bifidobacterium bifidum BGN4 13070272 YP_006393739.1 CDS acyP NC_017999.1 321307 321687 D COG1254:Acylphosphatases; acylphosphatase 321307..321687 Bifidobacterium bifidum BGN4 13070273 YP_006393740.1 CDS BBB_0265 NC_017999.1 322409 325879 D prespore-cell-inducing factor 322409..325879 Bifidobacterium bifidum BGN4 13070274 YP_006393741.1 CDS BBB_0266 NC_017999.1 326041 327642 D FimA fimbrial subunit-like protein 326041..327642 Bifidobacterium bifidum BGN4 13070275 YP_006393742.1 CDS srtA NC_017999.1 327823 329001 D COG3764:Sortase (surface protein transpeptidase); putative sortase 327823..329001 Bifidobacterium bifidum BGN4 13070276 YP_006393743.1 CDS BBB_0268 NC_017999.1 329278 330546 D hypothetical protein 329278..330546 Bifidobacterium bifidum BGN4 13070277 YP_006393744.1 CDS BBB_0269 NC_017999.1 330661 331476 D COG0179:2-keto-4-pentenoatehydratase/2-oxohepta-3- ene-1, 7-dioic acid hydratase(catechol pathway); putative 2-hydroxyhepta-2, 4-diene-1, 7-dioateisomerase 330661..331476 Bifidobacterium bifidum BGN4 13070278 YP_006393745.1 CDS clpB NC_017999.1 332307 334970 D COG0542:ATPases with chaperone activity, ATP-binding subunit; ATP-dependent chaperone 332307..334970 Bifidobacterium bifidum BGN4 13070279 YP_006393746.1 CDS mscS NC_017999.1 335265 336038 R COG0668:Small-conductance mechanosensitive channel; Small-conductance mechanosensitive channel complement(335265..336038) Bifidobacterium bifidum BGN4 13070280 YP_006393747.1 CDS BBB_0272 NC_017999.1 336101 336751 R COG1309:Transcriptional regulator; transcriptional regulator complement(336101..336751) Bifidobacterium bifidum BGN4 13070281 YP_006393748.1 CDS BBB_0273 NC_017999.1 336914 338188 R putative hydrolase or acyl transferase complement(336914..338188) Bifidobacterium bifidum BGN4 13070282 YP_006393749.1 CDS patA NC_017999.1 338296 339486 D COG0436:Aspartate/tyrosine/aromaticamino transferase; putative amino transferase A 338296..339486 Bifidobacterium bifidum BGN4 13070283 YP_006393750.1 CDS BBB_0275 NC_017999.1 339527 340675 D hypothetical protein 339527..340675 Bifidobacterium bifidum BGN4 13070284 YP_006393751.1 CDS BBB_0276 NC_017999.1 340993 342000 D hypothetical protein 340993..342000 Bifidobacterium bifidum BGN4 13070285 YP_006393752.1 CDS BBB_0277 NC_017999.1 342089 342226 R hypothetical protein complement(342089..342226) Bifidobacterium bifidum BGN4 13070286 YP_006393753.1 CDS BBB_0278 NC_017999.1 342455 342568 R hypothetical protein complement(342455..342568) Bifidobacterium bifidum BGN4 13070287 YP_006393754.1 CDS BBB_0279 NC_017999.1 342850 343056 R hypothetical protein complement(342850..343056) Bifidobacterium bifidum BGN4 13070288 YP_006393755.1 CDS fadD NC_017999.1 343317 345149 R COG1022:Long-chain acyl-CoA synthetases(AMP-forming); long-chain-fatty-acid--CoA ligase complement(343317..345149) Bifidobacterium bifidum BGN4 13070289 YP_006393756.1 CDS BBB_0281 NC_017999.1 345444 345593 D scramblase 345444..345593 Bifidobacterium bifidum BGN4 13070290 YP_006393757.1 CDS BBB_0282 NC_017999.1 345590 345931 D hypothetical protein 345590..345931 Bifidobacterium bifidum BGN4 13070291 YP_006393758.1 CDS tam NC_017999.1 346406 347125 D COG4106:Trans-aconitate methyl transferase; trans-aconitate 2-methyl transferase 346406..347125 Bifidobacterium bifidum BGN4 13070296 YP_006393759.1 CDS BBB_0284 NC_017999.1 347678 348925 D COG1396:Predicted transcriptional regulators; putative HTH-type transcriptional regulator 347678..348925 Bifidobacterium bifidum BGN4 13070297 YP_006393760.1 CDS BBB_0285 NC_017999.1 349223 349504 D hypothetical protein 349223..349504 Bifidobacterium bifidum BGN4 13070298 YP_006393761.1 CDS BBB_0286 NC_017999.1 349501 349608 R hypothetical protein complement(349501..349608) Bifidobacterium bifidum BGN4 13070299 YP_006393762.1 CDS BBB_0287 NC_017999.1 349786 349983 D hypothetical protein 349786..349983 Bifidobacterium bifidum BGN4 13070300 YP_006393763.1 CDS BBB_0288 NC_017999.1 349937 350830 D putative transposase 349937..350830 Bifidobacterium bifidum BGN4 13070301 YP_006393764.1 CDS dinJ NC_017999.1 350886 351065 D COG3077:DNA-damage-inducible protein J; DNA-damage-inducible protein J 350886..351065 Bifidobacterium bifidum BGN4 13070302 YP_006393765.1 CDS hpaIM NC_017999.1 351066 352022 D COG0863:DNA modification methylase; modification methylase 351066..352022 Bifidobacterium bifidum BGN4 13070303 YP_006393766.1 CDS BBB_0291 NC_017999.1 352025 352921 D hypothetical protein 352025..352921 Bifidobacterium bifidum BGN4 13070304 YP_006393767.1 CDS BBB_0292 NC_017999.1 353069 353392 D addiction module antitoxin 353069..353392 Bifidobacterium bifidum BGN4 13070305 YP_006393768.1 CDS BBB_0293 NC_017999.1 353382 353549 D hypothetical protein 353382..353549 Bifidobacterium bifidum BGN4 13070306 YP_006393769.1 CDS BBB_0294 NC_017999.1 353546 353770 D hypothetical protein 353546..353770 Bifidobacterium bifidum BGN4 13070307 YP_006393770.1 CDS tipA NC_017999.1 353955 354692 D COG0789:Predicted transcriptional regulators; HTH-type transcriptional activator 353955..354692 Bifidobacterium bifidum BGN4 13070308 YP_006393771.1 CDS BBB_0296 NC_017999.1 354873 356195 R COG2270:Permeases of the major facilitatorsuperfamily; MDR-type permease complement(354873..356195) Bifidobacterium bifidum BGN4 13070309 YP_006393772.1 CDS yegV NC_017999.1 357167 358225 R COG0524:Sugar kinases, ribokinase family; putative sugar kinase complement(357167..358225) Bifidobacterium bifidum BGN4 13070310 YP_006393773.1 CDS rpmB NC_017999.1 358485 358679 D COG0227:Ribosomal protein L28; 50S ribosomal protein L28 358485..358679 Bifidobacterium bifidum BGN4 13070311 YP_006393774.1 CDS recG NC_017999.1 358823 361495 D COG1200:RecG-like helicase; ATP-dependent DNA helicase 358823..361495 Bifidobacterium bifidum BGN4 13070312 YP_006393775.1 CDS BBB_0300 NC_017999.1 361676 362983 D APC family amino acid-polyamine-organocation transporter 361676..362983 Bifidobacterium bifidum BGN4 13070313 YP_006393776.1 CDS BBB_0301 NC_017999.1 363033 363206 D hypothetical protein 363033..363206 Bifidobacterium bifidum BGN4 13070314 YP_006393777.1 CDS BBB_0302 NC_017999.1 363444 364532 D hypothetical protein 363444..364532 Bifidobacterium bifidum BGN4 13070315 YP_006393778.1 CDS BBB_0303 NC_017999.1 365319 366506 D hypothetical protein 365319..366506 Bifidobacterium bifidum BGN4 13070316 YP_006393779.1 CDS BBB_0304 NC_017999.1 366515 368152 D COG1301:Na+/H+-dicarboxylate symporters; sodium:dicarboxylate symporter protein 366515..368152 Bifidobacterium bifidum BGN4 13070317 YP_006393780.1 CDS BBB_0305 NC_017999.1 368422 369126 D COG0742:N6-adenine-specific methylase; putative methyl transferase 368422..369126 Bifidobacterium bifidum BGN4 13070318 YP_006393781.1 CDS BBB_0306 NC_017999.1 369330 369956 D COG3560:Predicted oxidoreductase related tonitroreductase; nitroreductase-like putative oxidoreductase 369330..369956 Bifidobacterium bifidum BGN4 13070319 YP_006393782.1 CDS BBB_0307 NC_017999.1 370103 370555 R COG0071:Molecular chaperone (small heat shock protein); putative Hsp20 family chaperone complement(370103..370555) Bifidobacterium bifidum BGN4 13070320 YP_006393783.1 CDS trmD NC_017999.1 370802 371800 R COG0336:tRNA-(guanine-N1)-methyl transferase; tRNA (guanine-N(1)-)-methyl transferase complement(370802..371800) Bifidobacterium bifidum BGN4 13070321 YP_006393784.1 CDS rimM NC_017999.1 372051 372653 R COG0806:RimM protein, required for 16S rRNAprocessing; ribosome maturation factor complement(372051..372653) Bifidobacterium bifidum BGN4 13070322 YP_006393785.1 CDS BBB_0310 NC_017999.1 372662 372895 R COG1837:Predicted RNA-binding protein (contains KHdomain); hypothetical protein complement(372662..372895) Bifidobacterium bifidum BGN4 13070323 YP_006393786.1 CDS rpsP NC_017999.1 372898 373347 R COG0228:Ribosomal protein S16; 30S ribosomal protein S16 complement(372898..373347) Bifidobacterium bifidum BGN4 13070324 YP_006393787.1 CDS norG NC_017999.1 373924 375453 R COG1167:Transcriptional regulators containing aDNA-binding HTH domain and an amino transferase domain(MocR; HTH-type transcriptional regulator complement(373924..375453) Bifidobacterium bifidum BGN4 13070325 YP_006393788.1 CDS argO NC_017999.1 375653 376348 D COG1279:Lysine efflux permease; arginine exporter 375653..376348 Bifidobacterium bifidum BGN4 13070326 YP_006393789.1 CDS BBB_0314 NC_017999.1 376618 377790 R endonuclease/exonuclease/phosphatase complement(376618..377790) Bifidobacterium bifidum BGN4 13070327 YP_006393790.1 CDS ffh NC_017999.1 377966 379612 R COG0541:Signal recognition particle GTPase; signal recognition particle protein complement(377966..379612) Bifidobacterium bifidum BGN4 13070328 YP_006393791.1 CDS BBB_0316 NC_017999.1 379972 380880 D cation efflux protein 379972..380880 Bifidobacterium bifidum BGN4 13070329 YP_006393792.1 CDS cysS NC_017999.1 381097 382719 R COG0215:Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase complement(381097..382719) Bifidobacterium bifidum BGN4 13070330 YP_006393793.1 CDS guaAA NC_017999.1 382866 383591 D COG0518:GMP synthase - Glutamine amido transferasedomain; GMP synthase subunit A 382866..383591 Bifidobacterium bifidum BGN4 13070331 YP_006393794.1 CDS uup NC_017999.1 383698 385818 D COG0488:ATPase components of ABC transporters withduplicated ATPase domains; ABC transporter ATP-binding protein 383698..385818 Bifidobacterium bifidum BGN4 13070332 YP_006393795.1 CDS BBB_0320 NC_017999.1 385841 386182 R hypothetical protein complement(385841..386182) Bifidobacterium bifidum BGN4 13070333 YP_006393796.1 CDS coaD NC_017999.1 386352 386846 D COG0669:Phosphopantetheine adenylyl transferase; pantetheine-phosphate adenylyl transferase 386352..386846 Bifidobacterium bifidum BGN4 13070334 YP_006393797.1 CDS BBB_0322 NC_017999.1 386930 387835 D COG3599:Cell division initiation protein; cell division initiation protein 386930..387835 Bifidobacterium bifidum BGN4 13070335 YP_006393798.1 CDS BBB_0323 NC_017999.1 387900 388514 D COG1399:Predicted metal-binding, possibly nucleicacid-binding protein; putative metal-binding, possibly nucleic acidbinding protein 387900..388514 Bifidobacterium bifidum BGN4 13070336 YP_006393799.1 CDS rpmF NC_017999.1 388643 388837 D COG0333:Ribosomal protein L32; 50S ribosomal protein L32 388643..388837 Bifidobacterium bifidum BGN4 13070337 YP_006393800.1 CDS rnc NC_017999.1 388969 389754 D COG0571:dsRNA-specific ribonuclease; ribonuclease III 388969..389754 Bifidobacterium bifidum BGN4 13070338 YP_006393801.1 CDS ilvB NC_017999.1 389940 391832 D COG0028:Thiamine pyrophosphate-requiring enzymesacetolactate synthase, pyruvate dehydrogenase (cytochrome); acetolactate synthase large subunit 389940..391832 Bifidobacterium bifidum BGN4 13070339 YP_006393802.1 CDS ilvN NC_017999.1 391868 392422 D COG0440:Acetolactate synthase, small (regulatory) subunit; acetolactate synthase small subunit 391868..392422 Bifidobacterium bifidum BGN4 13070340 YP_006393803.1 CDS BBB_0328 NC_017999.1 392794 393456 R hypothetical protein complement(392794..393456) Bifidobacterium bifidum BGN4 13070341 YP_006393804.1 CDS BBB_0329 NC_017999.1 393479 394942 R COG1488:Nicotinic acid phosphoribosyl transferase; nicotinic acid phosphoribosyl transferase complement(393479..394942) Bifidobacterium bifidum BGN4 13070342 YP_006393805.1 CDS rph NC_017999.1 394971 395735 D COG0689:RNase PH; ribonuclease PH 394971..395735 Bifidobacterium bifidum BGN4 13070343 YP_006393806.1 CDS BBB_0331 NC_017999.1 395815 396483 D COG0127:Xanthosine triphosphate pyrophosphatase; nucleoside-triphosphatase 395815..396483 Bifidobacterium bifidum BGN4 13070344 YP_006393807.1 CDS BBB_0332 NC_017999.1 396605 397606 R COG0679:Predicted permeases; hypothetical protein complement(396605..397606) Bifidobacterium bifidum BGN4 13070345 YP_006393808.1 CDS pgi NC_017999.1 398110 399807 D COG0166:Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 398110..399807 Bifidobacterium bifidum BGN4 13070348 YP_006393809.1 CDS BBB_0334 NC_017999.1 400301 401443 D hypothetical protein 400301..401443 Bifidobacterium bifidum BGN4 13070349 YP_006393810.1 CDS BBB_0335 NC_017999.1 401449 402447 D hypothetical protein 401449..402447 Bifidobacterium bifidum BGN4 13070350 YP_006393811.1 CDS BBB_0336 NC_017999.1 402459 403577 D hypothetical protein 402459..403577 Bifidobacterium bifidum BGN4 13070351 YP_006393812.1 CDS BBB_0337 NC_017999.1 403695 403946 R hypothetical protein complement(403695..403946) Bifidobacterium bifidum BGN4 13070352 YP_006393813.1 CDS BBB_0338 NC_017999.1 403892 404455 D hypothetical protein 403892..404455 Bifidobacterium bifidum BGN4 13070353 YP_006393814.1 CDS mtgC NC_017999.1 404465 405202 R COG1285:Uncharacterized membrane protein; Mg++ transport, ATPase protein complement(404465..405202) Bifidobacterium bifidum BGN4 13070354 YP_006393815.1 CDS mgtA NC_017999.1 405332 408181 R COG0474:Cation transport ATPase; cation transport ATPase complement(405332..408181) Bifidobacterium bifidum BGN4 13070355 YP_006393816.1 CDS abcT NC_017999.1 408209 409708 R COG1116:ABC-type nitrate/sulfonate/bicarbonatetransport system, ATPase component; ABC transporter ATP-binding protein complement(408209..409708) Bifidobacterium bifidum BGN4 13070356 YP_006393817.1 CDS ssuC NC_017999.1 409834 411615 R COG4986:ABC-type anion transport system, duplicatedpermease component; putative aliphatic sulfonates transport permease complement(409834..411615) Bifidobacterium bifidum BGN4 13070357 YP_006393818.1 CDS sorC NC_017999.1 412422 413369 R COG2390:Transcriptional regulator, contains sigmafactor- related N-terminal domain; sorbitol operon regulator complement(412422..413369) Bifidobacterium bifidum BGN4 13070358 YP_006393819.1 CDS BBB_0344 NC_017999.1 413739 415001 D COG3775:Phospho transferasesystem, galactitol-specific IIC component; galactitol permease IIC component 413739..415001 Bifidobacterium bifidum BGN4 13070359 YP_006393820.1 CDS lyx NC_017999.1 415044 416567 D COG1070:Sugar (pentulose and hexulose) kinases; L-xylulose/3-keto-L-gulonate kinase 415044..416567 Bifidobacterium bifidum BGN4 13070360 YP_006393821.1 CDS sgbU NC_017999.1 416569 417459 D COG3623:Putative L-xylulose-5-phosphate3-epimerase; putative hexulose-6-phosphate isomerase 416569..417459 Bifidobacterium bifidum BGN4 13070361 YP_006393822.1 CDS araD NC_017999.1 417551 418243 D COG0235:Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase 417551..418243 Bifidobacterium bifidum BGN4 13070362 YP_006393823.1 CDS rplS NC_017999.1 418706 419083 D COG0335:Ribosomal protein L19; 50S ribosomal protein L19 418706..419083 Bifidobacterium bifidum BGN4 13070363 YP_006393824.1 CDS lepB NC_017999.1 419204 420019 D COG0681:Signal peptidase I; signal peptidase I 419204..420019 Bifidobacterium bifidum BGN4 13070364 YP_006393825.1 CDS rnhB NC_017999.1 420044 420739 D COG0164:Ribonuclease HII; ribonuclease HII 420044..420739 Bifidobacterium bifidum BGN4 13070365 YP_006393826.1 CDS lacI NC_017999.1 421017 422132 D COG1609:Transcriptional regulators; lactose operon repressor 421017..422132 Bifidobacterium bifidum BGN4 13070366 YP_006393827.1 CDS BBB_0352 NC_017999.1 422197 422565 R hypothetical protein complement(422197..422565) Bifidobacterium bifidum BGN4 13070367 YP_006393828.1 CDS fadD NC_017999.1 422706 424574 R COG1022:Long-chain acyl-CoA synthetases(AMP-forming); long-chain-fatty-acid--CoA ligase complement(422706..424574) Bifidobacterium bifidum BGN4 13070368 YP_006393829.1 CDS pdxS NC_017999.1 425085 425960 D COG0214:Pyridoxine biosynthesis enzyme; pyridoxal biosynthesis lyase 425085..425960 Bifidobacterium bifidum BGN4 13070369 YP_006393830.1 CDS pdxT NC_017999.1 426163 426783 D COG0311:Predicted glutamine amido transferaseinvolved in pyridoxine biosynthesis; glutamine amido transferase subunit 426163..426783 Bifidobacterium bifidum BGN4 13070370 YP_006393831.1 CDS BBB_0356 NC_017999.1 427358 427534 D hypothetical protein 427358..427534 Bifidobacterium bifidum BGN4 13070371 YP_006393832.1 CDS BBB_0357 NC_017999.1 427554 427742 D hypothetical protein 427554..427742 Bifidobacterium bifidum BGN4 13070372 YP_006393833.1 CDS xynD NC_017999.1 427821 429071 D putative endo-1,4-beta-xylanase 427821..429071 Bifidobacterium bifidum BGN4 13070373 YP_006393834.1 CDS cytR NC_017999.1 429145 430257 D COG1609:Transcriptional regulators; HTH-type transcriptional repressor 429145..430257 Bifidobacterium bifidum BGN4 13070374 YP_006393835.1 CDS BBB_0360 NC_017999.1 430621 430746 D hypothetical protein 430621..430746 Bifidobacterium bifidum BGN4 13070375 YP_006393836.1 CDS dkgA NC_017999.1 430925 431809 D COG0656:Aldo/keto reductases, related todiketogulonate reductase; 2,5-diketo-D-gluconic acid reductase A 430925..431809 Bifidobacterium bifidum BGN4 13070376 YP_006393837.1 CDS BBB_0362 NC_017999.1 431930 432664 D hypothetical protein 431930..432664 Bifidobacterium bifidum BGN4 13070377 YP_006393838.1 CDS mntH NC_017999.1 432819 434123 D COG1914:Mn2+ and Fe2+ transporters of the NRAMPfamily; putative manganese transport protein 432819..434123 Bifidobacterium bifidum BGN4 13070378 YP_006393839.1 CDS yhcA NC_017999.1 434452 436119 R COG0477:Permeases of the major facilitatorsuperfamily; putative transporter complement(434452..436119) Bifidobacterium bifidum BGN4 13070379 YP_006393840.1 CDS BBB_0365 NC_017999.1 437508 438311 D methyl-accepting chemotaxis protein 437508..438311 Bifidobacterium bifidum BGN4 13070380 YP_006393841.1 CDS BBB_0366 NC_017999.1 438636 439631 R COG3583:Uncharacterized protein conserved inbacteria; putative TraG- related protein complement(438636..439631) Bifidobacterium bifidum BGN4 13070381 YP_006393842.1 CDS trx NC_017999.1 439865 440227 R COG0526:Thiol-disulfide isomerase and thioredoxins; thioredoxin complement(439865..440227) Bifidobacterium bifidum BGN4 13070382 YP_006393843.1 CDS BBB_0368 NC_017999.1 440424 441050 D hypothetical protein 440424..441050 Bifidobacterium bifidum BGN4 13070383 YP_006393844.1 CDS BBB_0369 NC_017999.1 441196 442050 D COG0596:Predicted hydrolases or acyl transferases(alpha/beta hydrolase superfamily); putative alpha beta hydrolase 441196..442050 Bifidobacterium bifidum BGN4 13070384 YP_006393845.1 CDS BBB_0370 NC_017999.1 442155 443246 D COG2816:NTP pyrophosphohydrolases containing aZn-finger, probably nucleic-acid-binding; peroxisomal NADH pyrophosphatase 442155..443246 Bifidobacterium bifidum BGN4 13070385 YP_006393846.1 CDS BBB_0371 NC_017999.1 443687 445174 D COG1376:Uncharacterized protein conserved inbacteria; ErfK/YbiS/YcfS/YnhG family protein 443687..445174 Bifidobacterium bifidum BGN4 13070386 YP_006393847.1 CDS gcvH NC_017999.1 445321 445728 D COG0509:Glycine cleavage system H protein(lipoate-binding); glycine cleavage system H protein 445321..445728 Bifidobacterium bifidum BGN4 13070387 YP_006393848.1 CDS BBB_0373 NC_017999.1 445844 447205 D COG4850:Uncharacterized conserved protein; hypothetical protein 445844..447205 Bifidobacterium bifidum BGN4 13070388 YP_006393849.1 CDS ptrB NC_017999.1 447261 449723 D COG1770:Protease II; protease 447261..449723 Bifidobacterium bifidum BGN4 13070389 YP_006393850.1 CDS leuB NC_017999.1 450199 451230 D COG0473:Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 450199..451230 Bifidobacterium bifidum BGN4 13070390 YP_006393851.1 CDS lplA NC_017999.1 451392 452627 D COG0095:Lipoate- protein ligase A; putative lipoate- protein ligase A 451392..452627 Bifidobacterium bifidum BGN4 13070391 YP_006393852.1 CDS crp NC_017999.1 452797 453516 D COG0664:cAMP-binding proteins - catabolite geneactivator and regulatory subunit of cAMP-dependent proteink; catabolite gene activator 452797..453516 Bifidobacterium bifidum BGN4 13070392 YP_006393853.1 CDS mrcA NC_017999.1 453691 456000 D COG0744:Membrane carboxypeptidase(penicillin-binding protein); penicillin-binding protein 453691..456000 Bifidobacterium bifidum BGN4 13070393 YP_006393854.1 CDS yqjM NC_017999.1 456288 457421 D COG1902:NADH:flavin oxidoreductases, Old YellowEnzyme family; putative NADH-dependent flavin oxidoreductase 456288..457421 Bifidobacterium bifidum BGN4 13070394 YP_006393855.1 CDS pyrD NC_017999.1 457491 458504 R COG0167:Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase complement(457491..458504) Bifidobacterium bifidum BGN4 13070395 YP_006393856.1 CDS yulB NC_017999.1 458842 459645 D COG1349:Transcriptional regulators of sugarmetabolism; putative HTH-type transcriptional regulator 458842..459645 Bifidobacterium bifidum BGN4 13070396 YP_006393857.1 CDS galT NC_017999.1 459650 460900 D COG1085:Galactose-1-phosphate uridylyl transferase; galactose-1-phosphate uridylyl transferase 459650..460900 Bifidobacterium bifidum BGN4 13070397 YP_006393858.1 CDS galK NC_017999.1 460991 462241 D COG0153:Galactokinase; galactokinase 460991..462241 Bifidobacterium bifidum BGN4 13070398 YP_006393859.1 CDS shiA NC_017999.1 462459 463784 R COG0477:Permeases of the major facilitatorsuperfamily; putative metabolite transport protein complement(462459..463784) Bifidobacterium bifidum BGN4 13070399 YP_006393860.1 CDS BBB_0385 NC_017999.1 463964 464122 D hypothetical protein 463964..464122 Bifidobacterium bifidum BGN4 13070400 YP_006393861.1 CDS BBB_0386 NC_017999.1 464161 464433 D COG3830:ACT domain-containing protein; hypothetical protein 464161..464433 Bifidobacterium bifidum BGN4 13070401 YP_006393862.1 CDS BBB_0387 NC_017999.1 464453 465817 D COG2848:Uncharacterized conserved protein; hypothetical protein 464453..465817 Bifidobacterium bifidum BGN4 13070402 YP_006393863.1 CDS BBB_0388 NC_017999.1 466313 466927 D hypothetical protein 466313..466927 Bifidobacterium bifidum BGN4 13070403 YP_006393864.1 CDS BBB_0389 NC_017999.1 466899 467324 D hypothetical protein 466899..467324 Bifidobacterium bifidum BGN4 13070404 YP_006393865.1 CDS yibK NC_017999.1 468153 468662 R COG0219:Predicted rRNA methylase (SpoU class); putative tRNA/rRNA methyl transferase complement(468153..468662) Bifidobacterium bifidum BGN4 13070405 YP_006393866.1 CDS mutY NC_017999.1 470256 471272 D COG1194:A/G-specific DNA glycosylase; A/G-specific adenine glycosylase 470256..471272 Bifidobacterium bifidum BGN4 13070407 YP_006393867.1 CDS BBB_0393 NC_017999.1 471367 472023 D hypothetical protein 471367..472023 Bifidobacterium bifidum BGN4 13070408 YP_006393868.1 CDS BBB_0394 NC_017999.1 472027 472233 R hypothetical protein complement(472027..472233) Bifidobacterium bifidum BGN4 13070409 YP_006393869.1 CDS rpoB NC_017999.1 472292 475855 D COG0085:DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta 472292..475855 Bifidobacterium bifidum BGN4 13070410 YP_006393870.1 CDS rpoC NC_017999.1 475968 479999 D COG0086:DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-directed RNA polymerase subunit beta' 475968..479999 Bifidobacterium bifidum BGN4 13070411 YP_006393871.1 CDS BBB_0397 NC_017999.1 480254 480799 R forkhead domain containing protein complement(480254..480799) Bifidobacterium bifidum BGN4 13070412 YP_006393872.1 CDS BBB_0398 NC_017999.1 480814 481422 R hypothetical protein complement(480814..481422) Bifidobacterium bifidum BGN4 13070413 YP_006393873.1 CDS ppp NC_017999.1 481444 482337 R COG0631:Serine/threonine protein phosphatase; putative phospho protein phosphatase complement(481444..482337) Bifidobacterium bifidum BGN4 13070414 YP_006393874.1 CDS BBB_0400 NC_017999.1 482334 485030 R COG1305:Transglutaminase-like enzymes, putativecysteine proteases; putative cysteine protease complement(482334..485030) Bifidobacterium bifidum BGN4 13070415 YP_006393875.1 CDS BBB_0401 NC_017999.1 485027 486346 R COG1721:Uncharacterized conserved protein (somemembers contain a von Willebrand factor type A (vWA)domain); hypothetical protein complement(485027..486346) Bifidobacterium bifidum BGN4 13070416 YP_006393876.1 CDS moxR NC_017999.1 486357 488066 R COG0714:MoxR-like ATPases; methanol dehydrogenase regulator complement(486357..488066) Bifidobacterium bifidum BGN4 13070417 YP_006393877.1 CDS BBB_0403 NC_017999.1 488131 494109 R hypothetical protein complement(488131..494109) Bifidobacterium bifidum BGN4 13070418 YP_006393878.1 CDS pknK NC_017999.1 494188 495606 R COG0515:Serine/threonine protein kinase; putative serine/threonine- protein kinase complement(494188..495606) Bifidobacterium bifidum BGN4 13070419 YP_006393879.1 CDS uvrD NC_017999.1 495849 500132 D COG0210:Superfamily I DNA and RNA helicases; putative ATP-dependent DNA helicase 495849..500132 Bifidobacterium bifidum BGN4 13070420 YP_006393880.1 CDS pcrA NC_017999.1 500087 504331 D COG0210:Superfamily I DNA and RNA helicases; ATP-dependent DNA helicase 500087..504331 Bifidobacterium bifidum BGN4 13070421 YP_006393881.1 CDS BBB_0407 NC_017999.1 504681 505334 D acetyl transferase 504681..505334 Bifidobacterium bifidum BGN4 13070422 YP_006393882.1 CDS BBB_0408 NC_017999.1 505331 506749 D COG0477:Permeases of the major facilitatorsuperfamily; putative transport protein 505331..506749 Bifidobacterium bifidum BGN4 13070423 YP_006393883.1 CDS BBB_0409 NC_017999.1 506981 507265 R putative DNA modification methyl transferase complement(506981..507265) Bifidobacterium bifidum BGN4 13070424 YP_006393884.1 CDS dinJ NC_017999.1 507402 507581 R COG3077:DNA-damage-inducible protein J; DNA-damage-inducible protein J complement(507402..507581) Bifidobacterium bifidum BGN4 13070425 YP_006393885.1 CDS BBB_0411 NC_017999.1 507634 507981 R transposase complement(507634..507981) Bifidobacterium bifidum BGN4 13070426 YP_006393886.1 CDS dapB NC_017999.1 508209 508961 D COG0289:Dihydrodipicolinate reductase; dihydrodipicolinate reductase 508209..508961 Bifidobacterium bifidum BGN4 13070427 YP_006393887.1 CDS dapA NC_017999.1 509109 510014 D COG0329:Dihydrodipicolinatesynthase/N- acetylneuraminate lyase; dihydrodipicolinate synthase 509109..510014 Bifidobacterium bifidum BGN4 13070428 YP_006393888.1 CDS BBB_0414 NC_017999.1 510188 512029 D COG0595:Predicted hydrolase of themetallo-beta-lactamase superfamily; ribonuclease J 510188..512029 Bifidobacterium bifidum BGN4 13070429 YP_006393889.1 CDS pepN NC_017999.1 512195 514807 D COG0308:Aminopeptidase N; aminopeptidase N 512195..514807 Bifidobacterium bifidum BGN4 13070430 YP_006393890.1 CDS BBB_0416 NC_017999.1 515347 517011 D hypothetical protein 515347..517011 Bifidobacterium bifidum BGN4 13070431 YP_006393891.1 CDS glmM NC_017999.1 517387 518772 D COG1109:Phosphomannomutase; phosphoglucosamine mutase 517387..518772 Bifidobacterium bifidum BGN4 13070432 YP_006393892.1 CDS def NC_017999.1 518814 519467 D COG0242:N-formylmethionyl-tRNA deformylase; peptide deformylase 518814..519467 Bifidobacterium bifidum BGN4 13070433 YP_006393893.1 CDS BBB_0419 NC_017999.1 519646 521067 R hypothetical protein complement(519646..521067) Bifidobacterium bifidum BGN4 13070434 YP_006393894.1 CDS vsr NC_017999.1 521155 521811 D COG3727:DNA G:T-mismatch repair endonuclease; putative very short patch repair endonuclease 521155..521811 Bifidobacterium bifidum BGN4 13070435 YP_006393895.1 CDS aspC NC_017999.1 521941 523134 D COG0436:Aspartate/tyrosine/aromaticamino transferase; aspartate amino transferase 521941..523134 Bifidobacterium bifidum BGN4 13070436 YP_006393896.1 CDS gppA NC_017999.1 523634 523960 D COG0248:Exopolyphosphatase; exopolyphosphatase 523634..523960 Bifidobacterium bifidum BGN4 13070437 YP_006393897.1 CDS BBB_0423 NC_017999.1 524013 524762 R hypothetical protein complement(524013..524762) Bifidobacterium bifidum BGN4 13070438 YP_006393898.1 CDS thiF NC_017999.1 524978 525787 D COG0476:Dinucleotide-utilizing enzymes involved inmolybdopterin and thiamine biosynthesis family 2; thiazole biosynthesis adenylyl transferase 524978..525787 Bifidobacterium bifidum BGN4 13070439 YP_006393899.1 CDS sirA NC_017999.1 525966 527333 D COG2210:Uncharacterized conserved protein; transcriptional regulator 525966..527333 Bifidobacterium bifidum BGN4 13070440 YP_006393900.1 CDS rihA NC_017999.1 527407 528384 D COG1957:Inosine-uridine nucleoside N-ribohydrolase; pyrimidine-specific ribonucleoside hydrolase 527407..528384 Bifidobacterium bifidum BGN4 13070441 YP_006393901.1 CDS BBB_0427 NC_017999.1 528642 528761 D hypothetical protein 528642..528761 Bifidobacterium bifidum BGN4 13070442 YP_006393902.1 CDS BBB_0428 NC_017999.1 529314 530429 D endonuclease/exonuclease/phosphatase 529314..530429 Bifidobacterium bifidum BGN4 13070444 YP_006393903.1 CDS xseB NC_017999.1 530732 531031 R COG1722:Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(530732..531031) Bifidobacterium bifidum BGN4 13070445 YP_006393904.1 CDS xseA NC_017999.1 531145 532560 R COG1570:Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit complement(531145..532560) Bifidobacterium bifidum BGN4 13070446 YP_006393905.1 CDS nrdD NC_017999.1 532767 535151 D COG1328:Oxygen-sensitiveribonucleoside-triphosphate reductase; anaerobic ribonucleoside-triphosphate reductase 532767..535151 Bifidobacterium bifidum BGN4 13070447 YP_006393906.1 CDS nrdG NC_017999.1 535306 536013 D COG0602:Organic radical activating enzymes; anaerobic ribonucleoside-triphosphate reductaseactivating protein 535306..536013 Bifidobacterium bifidum BGN4 13070448 YP_006393907.1 CDS hgdC NC_017999.1 536602 541614 D COG1924:Activator of 2-hydroxyglutaryl-CoAdehydratase (HSP70-class ATPase domain); activator of (R)-2-hydroxyglutaryl-CoAdehydratase 536602..541614 Bifidobacterium bifidum BGN4 13070449 YP_006393908.1 CDS BBB_0434 NC_017999.1 541637 542449 R PpiC-type peptidyl-prolyl cis-trans isomerase complement(541637..542449) Bifidobacterium bifidum BGN4 13070450 YP_006393909.1 CDS gsh NC_017999.1 542624 543895 R COG3572:Gamma-glutamylcysteine synthetase; glutamate--cysteine ligase complement(542624..543895) Bifidobacterium bifidum BGN4 13070451 YP_006393910.1 CDS BBB_0436 NC_017999.1 544172 549700 D hypothetical protein 544172..549700 Bifidobacterium bifidum BGN4 13070452 YP_006393911.1 CDS slyA NC_017999.1 549985 550518 D COG1846:Transcriptional regulators; transcriptional regulator 549985..550518 Bifidobacterium bifidum BGN4 13070453 YP_006393912.1 CDS yfiB NC_017999.1 550515 552398 D COG1132:ABC-type multidrug transport system, ATPaseand permease components; ABC transporter ATP-binding protein 550515..552398 Bifidobacterium bifidum BGN4 13070454 YP_006393913.1 CDS mdlB NC_017999.1 552395 554410 D COG1132:ABC-type multidrug transport system, ATPaseand permease components; ABC transporter ATP-binding protein 552395..554410 Bifidobacterium bifidum BGN4 13070455 YP_006393914.1 CDS yjjU NC_017999.1 554647 555477 R COG4667:Predicted esterase of the alpha-betahydrolase superfamily; putative esterase complement(554647..555477) Bifidobacterium bifidum BGN4 13070456 YP_006393915.1 CDS murI NC_017999.1 555712 556521 R COG0796:Glutamate racemase; glutamate racemase complement(555712..556521) Bifidobacterium bifidum BGN4 13070457 YP_006393916.1 CDS BBB_0442 NC_017999.1 556518 556721 R hypothetical protein complement(556518..556721) Bifidobacterium bifidum BGN4 13070458 YP_006393917.1 CDS dapF NC_017999.1 556749 557648 D COG0253:Diaminopimelate epimerase; diaminopimelate epimerase 556749..557648 Bifidobacterium bifidum BGN4 13070459 YP_006393918.1 CDS BBB_0444 NC_017999.1 557749 558408 R COG4243:Predicted membrane protein; vitamin K epoxide reductase complement(557749..558408) Bifidobacterium bifidum BGN4 13070460 YP_006393919.1 CDS BBB_0445 NC_017999.1 558544 559425 D COG0613:Predicted metal-dependent phosphoesterases(PHP family); putative metal-dependent phosphoesterase 558544..559425 Bifidobacterium bifidum BGN4 13070461 YP_006393920.1 CDS BBB_0446 NC_017999.1 559584 559808 R putative ATP-binding protein complement(559584..559808) Bifidobacterium bifidum BGN4 13070462 YP_006393921.1 CDS BBB_0447 NC_017999.1 559965 561443 R aminoglycoside phospho transferase complement(559965..561443) Bifidobacterium bifidum BGN4 13070463 YP_006393922.1 CDS uvrD NC_017999.1 561587 563086 D COG0210:Superfamily I DNA and RNA helicases; putative DNA helicase II-like protein 561587..563086 Bifidobacterium bifidum BGN4 13070464 YP_006393923.1 CDS BBB_0449 NC_017999.1 563144 564688 R COG5282:Uncharacterized conserved protein; hypothetical protein complement(563144..564688) Bifidobacterium bifidum BGN4 13070465 YP_006393924.1 CDS BBB_0450 NC_017999.1 564750 565598 D COG3480:Predicted secreted protein containing a PDZdomain; PDZ/DHR/GLGF domain containing protein 564750..565598 Bifidobacterium bifidum BGN4 13070466 YP_006393925.1 CDS BBB_0451 NC_017999.1 565803 566219 D hypothetical protein 565803..566219 Bifidobacterium bifidum BGN4 13070467 YP_006393926.1 CDS ccpA NC_017999.1 566403 567446 R COG1609:Transcriptional regulators; glucose-resistance amylase regulator complement(566403..567446) Bifidobacterium bifidum BGN4 13070468 YP_006393927.1 CDS BBB_0453 NC_017999.1 567591 567965 R COG0011:Uncharacterized conserved protein; hypothetical protein complement(567591..567965) Bifidobacterium bifidum BGN4 13070469 YP_006393928.1 CDS thiD NC_017999.1 568069 568965 R COG0351:Hydroxymethylpyrimidine/phosphomethylpyrimi dine kinase; phosphomethylpyrimidine kinase complement(568069..568965) Bifidobacterium bifidum BGN4 13070470 YP_006393929.1 CDS BBB_0455 NC_017999.1 569073 570281 D COG0464:ATPases of the AAA+ class; cell division cycle protein 569073..570281 Bifidobacterium bifidum BGN4 13070471 YP_006393930.1 CDS BBB_0456 NC_017999.1 570860 571333 R hypothetical protein complement(570860..571333) Bifidobacterium bifidum BGN4 13070472 YP_006393931.1 CDS thiC NC_017999.1 571456 574212 R COG0422:Thiamine biosynthesis protein ThiC; thiamine biosynthesis protein complement(571456..574212) Bifidobacterium bifidum BGN4 13070473 YP_006393932.1 CDS thiM NC_017999.1 574307 575200 R COG2145:Hydroxyethylthiazole kinase, sugar kinasefamily; hydroxyethylthiazole kinase complement(574307..575200) Bifidobacterium bifidum BGN4 13070474 YP_006393933.1 CDS lacZ NC_017999.1 575594 581401 D COG3250:Beta-galactosidase/beta-glucuronidase; beta-galactosidase 575594..581401 Bifidobacterium bifidum BGN4 13070475 YP_006393934.1 CDS glyS NC_017999.1 581577 583097 D COG0423:Glycyl-tRNA synthetase (class II); glycyl-tRNA synthetase 581577..583097 Bifidobacterium bifidum BGN4 13070476 YP_006393935.1 CDS dus NC_017999.1 583227 584540 D COG0042:tRNA-dihydrouridine synthase; putative tRNA-dihydrouridine synthase 583227..584540 Bifidobacterium bifidum BGN4 13070477 YP_006393936.1 CDS ftsZ NC_017999.1 584616 585896 D COG0206:Cell division GTPase; cell division protein 584616..585896 Bifidobacterium bifidum BGN4 13070478 YP_006393937.1 CDS BBB_0463 NC_017999.1 585918 586388 D COG1799:Uncharacterized protein conserved inbacteria; hypothetical protein 585918..586388 Bifidobacterium bifidum BGN4 13070479 YP_006393938.1 CDS tlyC NC_017999.1 586516 586797 D COG0762:Predicted integral membrane protein; putative hemolysin 586516..586797 Bifidobacterium bifidum BGN4 13070480 YP_006393939.1 CDS BBB_0465 NC_017999.1 586907 588208 D COG3599:Cell division initiation protein; hypothetical protein 586907..588208 Bifidobacterium bifidum BGN4 13070481 YP_006393940.1 CDS lspA NC_017999.1 588212 588889 D COG0597:Lipo protein signal peptidase; signal peptidase II 588212..588889 Bifidobacterium bifidum BGN4 13070482 YP_006393941.1 CDS BBB_0467 NC_017999.1 588886 589827 D COG0564:Pseudouridylate synthases, 23S RNA-specific; RNA pseudouridylate synthase 588886..589827 Bifidobacterium bifidum BGN4 13070483 YP_006393942.1 CDS BBB_0468 NC_017999.1 589942 590265 R hypothetical protein complement(589942..590265) Bifidobacterium bifidum BGN4 13070484 YP_006393943.1 CDS BBB_0469 NC_017999.1 590546 590890 D hypothetical protein 590546..590890 Bifidobacterium bifidum BGN4 13070485 YP_006393944.1 CDS dapD NC_017999.1 591260 592279 R COG2171:TetrahydrodipicolinateN-succinyl transferase; 2,3,4,5-tetrahydropyridine-2, 6-dicarboxylateN-succinyl transferase complement(591260..592279) Bifidobacterium bifidum BGN4 13070486 YP_006393945.1 CDS BBB_0471 NC_017999.1 592418 592549 D hypothetical protein 592418..592549 Bifidobacterium bifidum BGN4 13070487 YP_006393946.1 CDS prfB NC_017999.1 592662 593789 D COG1186: protein chain release factor B; peptide chain release factor 592662..593789 Bifidobacterium bifidum BGN4 13070488 YP_006393947.1 CDS ftsE NC_017999.1 593834 595258 D COG2884:Predicted ATPase involved in cell division; cell division ATP-binding protein 593834..595258 Bifidobacterium bifidum BGN4 13070489 YP_006393948.1 CDS ftsX NC_017999.1 595255 596178 D COG2177:Cell division protein; cell division protein 595255..596178 Bifidobacterium bifidum BGN4 13070490 YP_006393949.1 CDS ssaA NC_017999.1 597391 597774 D COG3942:Surface antigen; secretory antigen 597391..597774 Bifidobacterium bifidum BGN4 13070491 YP_006393950.1 CDS smpB NC_017999.1 597874 598353 D COG0691:tmRNA-binding protein; SsrA-binding protein 597874..598353 Bifidobacterium bifidum BGN4 13070492 YP_006393951.1 CDS BBB_0477 NC_017999.1 598397 599137 D COG0564:Pseudouridylate synthases, 23S RNA-specific; RNA pseudouridylate synthase 598397..599137 Bifidobacterium bifidum BGN4 13070493 YP_006393952.1 CDS BBB_0478 NC_017999.1 599234 599464 D COG1476:Predicted transcriptional regulators; putative HTH-type transcriptional regulator 599234..599464 Bifidobacterium bifidum BGN4 13070494 YP_006393953.1 CDS BBB_0479 NC_017999.1 599589 599834 R hypothetical protein complement(599589..599834) Bifidobacterium bifidum BGN4 13070495 YP_006393954.1 CDS BBB_0480 NC_017999.1 599837 600082 R hypothetical protein complement(599837..600082) Bifidobacterium bifidum BGN4 13070496 YP_006393955.1 CDS BBB_0481 NC_017999.1 600146 600310 R hypothetical protein complement(600146..600310) Bifidobacterium bifidum BGN4 13070497 YP_006393956.1 CDS BBB_0482 NC_017999.1 600663 602237 D pyridoxine biosynthesis enzyme 600663..602237 Bifidobacterium bifidum BGN4 13070499 YP_006393957.1 CDS dxr NC_017999.1 602295 603485 D COG0743:1-deoxy-D-xylulose 5-phosphatereductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 602295..603485 Bifidobacterium bifidum BGN4 13070500 YP_006393958.1 CDS ispG NC_017999.1 603663 604865 D COG0821:Enzyme involved in the deoxyxylulosepathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase 603663..604865 Bifidobacterium bifidum BGN4 13070501 YP_006393959.1 CDS BBB_0485 NC_017999.1 605133 606758 D hydrolase 605133..606758 Bifidobacterium bifidum BGN4 13070502 YP_006393960.1 CDS recO NC_017999.1 606823 607605 D COG1381:Recombinational DNA repair protein (RecFpathway); DNA repair protein 606823..607605 Bifidobacterium bifidum BGN4 13070503 YP_006393961.1 CDS uppS NC_017999.1 607610 608401 D COG0020:Undecaprenyl pyrophosphate synthase; di-trans, poly-cis-decaprenylcis transferase 607610..608401 Bifidobacterium bifidum BGN4 13070504 YP_006393962.1 CDS BBB_0488 NC_017999.1 608534 609448 R COG3878:Uncharacterized protein conserved inbacteria; hypothetical protein complement(608534..609448) Bifidobacterium bifidum BGN4 13070505 YP_006393963.1 CDS dnaE NC_017999.1 610408 613977 D COG0587:DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 610408..613977 Bifidobacterium bifidum BGN4 13070507 YP_006393964.1 CDS BBB_0491 NC_017999.1 614108 615184 D hypothetical protein 614108..615184 Bifidobacterium bifidum BGN4 13070508 YP_006393965.1 CDS yqeI NC_017999.1 615275 615580 R COG1534:Predicted RNA-binding protein containing KHdomain, possibly ribosomal protein; putative RNA-binding protein complement(615275..615580) Bifidobacterium bifidum BGN4 13070509 YP_006393966.1 CDS BBB_0493 NC_017999.1 615768 617645 D COG4716:Myosin-crossreactive antigen; putative 67 kDa myosin-crossreactivestreptococcal antigen 615768..617645 Bifidobacterium bifidum BGN4 13070510 YP_006393967.1 CDS dnaA NC_017999.1 617698 618000 R COG0593:ATPase involved in DNA replicationinitiation; chromosomal replication initiator protein complement(617698..618000) Bifidobacterium bifidum BGN4 13070511 YP_006393968.1 CDS BBB_0495 NC_017999.1 618023 618148 R hypothetical protein complement(618023..618148) Bifidobacterium bifidum BGN4 13070512 YP_006393969.1 CDS BBB_0496 NC_017999.1 618228 619268 R transcriptional regulator complement(618228..619268) Bifidobacterium bifidum BGN4 13070513 YP_006393970.1 CDS BBB_0497 NC_017999.1 619408 620235 R COG0656:Aldo/keto reductases, related todiketogulonate reductase; putative reductase complement(619408..620235) Bifidobacterium bifidum BGN4 13070514 YP_006393971.1 CDS BBB_0498 NC_017999.1 620419 620553 D hypothetical protein 620419..620553 Bifidobacterium bifidum BGN4 13070515 YP_006393972.1 CDS dkgA NC_017999.1 620543 621451 D COG0656:Aldo/keto reductases, related todiketogulonate reductase; 2,5-diketo-D-gluconic acid reductase A 620543..621451 Bifidobacterium bifidum BGN4 13070516 YP_006393973.1 CDS BBB_0500 NC_017999.1 621565 621975 D putative cytoplasmic protein 621565..621975 Bifidobacterium bifidum BGN4 13069485 YP_006393974.1 CDS BBB_0501 NC_017999.1 622445 622663 D hypothetical protein 622445..622663 Bifidobacterium bifidum BGN4 13069486 YP_006393975.1 CDS BBB_0502 NC_017999.1 622906 623022 D hypothetical protein 622906..623022 Bifidobacterium bifidum BGN4 13069487 YP_006393976.1 CDS BBB_0503 NC_017999.1 623037 624005 R hypothetical protein complement(623037..624005) Bifidobacterium bifidum BGN4 13069488 YP_006393977.1 CDS BBB_0504 NC_017999.1 624065 624196 D hypothetical protein 624065..624196 Bifidobacterium bifidum BGN4 13069489 YP_006393978.1 CDS hisD NC_017999.1 624193 625590 D COG0141:Histidinol dehydrogenase; histidinol dehydrogenase 624193..625590 Bifidobacterium bifidum BGN4 13069490 YP_006393979.1 CDS hisC NC_017999.1 625732 626907 D COG0079:Histidinol-phosphate/aromaticamino transferase and cobyric acid decarboxylase; histidinol-phosphate amino transferase 625732..626907 Bifidobacterium bifidum BGN4 13069491 YP_006393980.1 CDS hisB NC_017999.1 627045 627647 D COG0131:Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 627045..627647 Bifidobacterium bifidum BGN4 13069492 YP_006393981.1 CDS BBB_0508 NC_017999.1 627647 628360 D hypothetical protein 627647..628360 Bifidobacterium bifidum BGN4 13069493 YP_006393982.1 CDS hisH NC_017999.1 628429 629079 D COG0118:Glutamine amido transferase; imidazole glycerol phosphate synthase, glutamineamido transferase subunit 628429..629079 Bifidobacterium bifidum BGN4 13069494 YP_006393983.1 CDS BBB_0510 NC_017999.1 629191 629916 D COG0106:Phosphoribosylformimino-5- aminoimidazolecarboxamide ribonucleotide (ProFAR) isomerase; bifunctional 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase/N-(5'-phosphoribosyl)anthranilate isomerase 629191..629916 Bifidobacterium bifidum BGN4 13069495 YP_006393984.1 CDS BBB_0511 NC_017999.1 629990 631468 R COG4320:Uncharacterized protein conserved inbacteria; hypothetical protein complement(629990..631468) Bifidobacterium bifidum BGN4 13069496 YP_006393985.1 CDS glnA NC_017999.1 631542 632879 D COG0174:Glutamine synthetase; glutamine synthetase, type I 631542..632879 Bifidobacterium bifidum BGN4 13069497 YP_006393986.1 CDS ydhP NC_017999.1 634643 634966 D COG2814:Arabinose efflux permease; inner membrane transport protein 634643..634966 Bifidobacterium bifidum BGN4 13069498 YP_006393987.1 CDS BBB_0514 NC_017999.1 634929 635975 R hemagglutinin- related protein complement(634929..635975) Bifidobacterium bifidum BGN4 13069499 YP_006393988.1 CDS hrpA NC_017999.1 636056 640144 R COG1643:HrpA-like helicases; ATP-dependent helicase complement(636056..640144) Bifidobacterium bifidum BGN4 13069500 YP_006393989.1 CDS BBB_0516 NC_017999.1 640149 640802 R COG2813:16S RNA G1207 methylase RsmC; methyl transferase small complement(640149..640802) Bifidobacterium bifidum BGN4 13069501 YP_006393990.1 CDS BBB_0517 NC_017999.1 641035 641967 D restriction endonuclease 641035..641967 Bifidobacterium bifidum BGN4 13069502 YP_006393991.1 CDS hflX NC_017999.1 642156 643727 D COG2262:GTPases; GTP-binding protein 642156..643727 Bifidobacterium bifidum BGN4 13069503 YP_006393992.1 CDS BBB_0519 NC_017999.1 643919 644881 D COG0039:Malate/lactate dehydrogenases; L-lactate dehydrogenase 643919..644881 Bifidobacterium bifidum BGN4 13069504 YP_006393993.1 CDS czcD NC_017999.1 645251 646189 D COG1230:Co/Zn/Cd efflux system component; cation efflux system protein 645251..646189 Bifidobacterium bifidum BGN4 13069505 YP_006393994.1 CDS lexA NC_017999.1 646323 647024 R COG1974:SOS-response transcriptional repressors(RecA-mediated autopeptidases); DNA-binding transcriptional repressor complement(646323..647024) Bifidobacterium bifidum BGN4 13069506 YP_006393995.1 CDS lytE NC_017999.1 647174 647671 D lytE protein 647174..647671 Bifidobacterium bifidum BGN4 13069507 YP_006393996.1 CDS nrdR NC_017999.1 647815 648282 D COG1327:Predicted transcriptionalregulator, consists of a Zn-ribbon and ATP-cone domains; transcriptional regulator 647815..648282 Bifidobacterium bifidum BGN4 13069508 YP_006393997.1 CDS serA NC_017999.1 648494 649693 R COG0111:Phosphoglycerate dehydrogenase and relateddehydrogenases; D-3-phosphoglycerate dehydrogenase complement(648494..649693) Bifidobacterium bifidum BGN4 13069509 YP_006393998.1 CDS BBB_0525 NC_017999.1 649704 651983 R COG3973:Superfamily I DNA and RNA helicases; ATP-dependent DNA helicase complement(649704..651983) Bifidobacterium bifidum BGN4 13069510 YP_006393999.1 CDS mraZ NC_017999.1 652259 652708 D COG2001:Uncharacterized protein conserved inbacteria; cell division protein 652259..652708 Bifidobacterium bifidum BGN4 13069511 YP_006394000.1 CDS mraW NC_017999.1 652708 653820 D COG0275:Predicted S-adenosylmethionine-dependentmethyl transferase involved in cell envelope biogenesis; S-adenosyl-methyl transferase 652708..653820 Bifidobacterium bifidum BGN4 13069512 YP_006394001.1 CDS BBB_0528 NC_017999.1 653820 654290 D hypothetical protein 653820..654290 Bifidobacterium bifidum BGN4 13069513 YP_006394002.1 CDS ftsI NC_017999.1 654287 656101 D COG0768:Cell division proteinFtsI/penicillin-binding protein 2; peptidoglycan synthetase 654287..656101 Bifidobacterium bifidum BGN4 13069514 YP_006394003.1 CDS BBB_0530 NC_017999.1 656164 657192 D UDP-N-acetylmuramyl tripeptide synthase 656164..657192 Bifidobacterium bifidum BGN4 13069515 YP_006394004.1 CDS murF NC_017999.1 657207 658748 D COG0770:UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 657207..658748 Bifidobacterium bifidum BGN4 13069516 YP_006394005.1 CDS mraY NC_017999.1 658766 659872 D COG0472:UDP-N-acetylmuramyl pentapeptidephospho transferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 658766..659872 Bifidobacterium bifidum BGN4 13069517 YP_006394006.1 CDS murD NC_017999.1 659983 661413 D COG0771:UDP-N-acetylmuramoylalanine-D- glutamateligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 659983..661413 Bifidobacterium bifidum BGN4 13069518 YP_006394007.1 CDS fstW NC_017999.1 661403 662737 D COG0772:Bacterial cell division membrane protein; putative cell cycle protein 661403..662737 Bifidobacterium bifidum BGN4 13069519 YP_006394008.1 CDS murG NC_017999.1 662863 664032 D COG0707:UDP-N-acetylglucosamine:LPSN- acetylglucosamine transferase; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 662863..664032 Bifidobacterium bifidum BGN4 13069520 YP_006394009.1 CDS murC NC_017999.1 664103 665692 D COG0773:UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 664103..665692 Bifidobacterium bifidum BGN4 13069521 YP_006394010.1 CDS ftsQ NC_017999.1 665692 666945 D COG1589:Cell division septal protein; cell division septal protein 665692..666945 Bifidobacterium bifidum BGN4 13069522 YP_006394011.1 CDS BBB_0538 NC_017999.1 667517 667972 R hypothetical protein complement(667517..667972) Bifidobacterium bifidum BGN4 13069523 YP_006394012.1 CDS dtd NC_017999.1 668146 668619 D COG1490:D-Tyr-tRNAtyr deacylase; D-tyrosyl-tRNA(Tyr) deacylase 668146..668619 Bifidobacterium bifidum BGN4 13069524 YP_006394013.1 CDS BBB_0540 NC_017999.1 668836 670119 R COG0738:Fucose permease; glucose/galactose transporter complement(668836..670119) Bifidobacterium bifidum BGN4 13069525 YP_006394014.1 CDS kdgK NC_017999.1 670188 671084 R COG0524:Sugar kinases, ribokinase family; 2-dehydro-3-deoxygluconokinase complement(670188..671084) Bifidobacterium bifidum BGN4 13069526 YP_006394015.1 CDS nagC NC_017999.1 671189 672400 R COG1940:Transcriptional regulator/sugar kinase; N-acetylglucosamine repressor complement(671189..672400) Bifidobacterium bifidum BGN4 13069527 YP_006394016.1 CDS cutC NC_017999.1 672641 673375 D COG3142:Uncharacterized protein involved in copperresistance; copper homeostasis protein 672641..673375 Bifidobacterium bifidum BGN4 13069528 YP_006394017.1 CDS xylR NC_017999.1 673419 674558 R COG1940:Transcriptional regulator/sugar kinase; xylose repressor complement(673419..674558) Bifidobacterium bifidum BGN4 13069529 YP_006394018.1 CDS BBB_0545 NC_017999.1 674688 674810 R hypothetical protein complement(674688..674810) Bifidobacterium bifidum BGN4 13069530 YP_006394019.1 CDS nagB NC_017999.1 674809 675621 D COG0363:6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase; glucosamine-6-phosphate isomerase 674809..675621 Bifidobacterium bifidum BGN4 13069531 YP_006394020.1 CDS nagA NC_017999.1 675759 677015 D COG1820:N-acetylglucosamine-6-phosphatedeacetylase; N-acetylglucosamine-6-phosphate deacetylase 675759..677015 Bifidobacterium bifidum BGN4 13069532 YP_006394021.1 CDS BBB_0548 NC_017999.1 677300 678970 D COG0747:ABC-type dipeptide transportsystem, periplasmic component; solute-binding protein of ABC transporter 677300..678970 Bifidobacterium bifidum BGN4 13069533 YP_006394022.1 CDS BBB_0549 NC_017999.1 678946 679089 R hypothetical protein complement(678946..679089) Bifidobacterium bifidum BGN4 13069534 YP_006394023.1 CDS dppB NC_017999.1 679125 680213 D COG0601:ABC-type dipeptide/oligopeptide/nickeltransport systems, permease components; dipeptide transport system permease 679125..680213 Bifidobacterium bifidum BGN4 13069535 YP_006394024.1 CDS gsiD NC_017999.1 680215 681366 D COG1173:ABC-type dipeptide/oligopeptide/nickeltransport systems, permease components; glutathione transport system permease 680215..681366 Bifidobacterium bifidum BGN4 13069536 YP_006394025.1 CDS gsiA NC_017999.1 681359 683092 D COG1123:ATPase components of various ABC-typetransport systems, contain duplicated ATPase; glutathione import ATP-binding protein 681359..683092 Bifidobacterium bifidum BGN4 13069537 YP_006394026.1 CDS pepP NC_017999.1 683261 684859 D COG0006:Xaa-Pro aminopeptidase; Xaa-Pro aminopeptidase 683261..684859 Bifidobacterium bifidum BGN4 13069538 YP_006394027.1 CDS BBB_0554 NC_017999.1 684933 685454 D COG0494:NTP pyrophosphohydrolases includingoxidative damage repair enzymes; putative nucleoside triphosphatepyrophosphohydrolase 684933..685454 Bifidobacterium bifidum BGN4 13069539 YP_006394028.1 CDS folC NC_017999.1 686011 687651 D COG0285:Folylpolyglutamate synthase; folylpolyglutamate synthase 686011..687651 Bifidobacterium bifidum BGN4 13069540 YP_006394029.1 CDS smc NC_017999.1 687657 691319 D COG1196:Chromosome segregation ATPases; chromosome segregation protein 687657..691319 Bifidobacterium bifidum BGN4 13069541 YP_006394030.1 CDS racD NC_017999.1 691495 692220 R COG1794:Aspartate racemase; aspartate racemase complement(691495..692220) Bifidobacterium bifidum BGN4 13069542 YP_006394031.1 CDS BBB_0558 NC_017999.1 692246 693481 R COG3919:Predicted ATP-grasp enzyme; putative ATP-grasp enzyme complement(692246..693481) Bifidobacterium bifidum BGN4 13069543 YP_006394032.1 CDS BBB_0559 NC_017999.1 693504 693986 R hypothetical protein complement(693504..693986) Bifidobacterium bifidum BGN4 13069544 YP_006394033.1 CDS BBB_0560 NC_017999.1 693939 694865 D hypothetical protein 693939..694865 Bifidobacterium bifidum BGN4 13069545 YP_006394034.1 CDS BBB_0561 NC_017999.1 694945 695943 R hypothetical protein complement(694945..695943) Bifidobacterium bifidum BGN4 13069546 YP_006394035.1 CDS murE NC_017999.1 695988 697547 R COG0769:UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(695988..697547) Bifidobacterium bifidum BGN4 13069547 YP_006394036.1 CDS rpoE NC_017999.1 697687 698400 D COG1595:DNA-directed RNA polymerase specializedsigma subunit, sigma24 homolog; RNA polymerase sigma-E factor 697687..698400 Bifidobacterium bifidum BGN4 13069548 YP_006394037.1 CDS BBB_0564 NC_017999.1 698393 698761 D hypothetical protein 698393..698761 Bifidobacterium bifidum BGN4 13069549 YP_006394038.1 CDS BBB_0565 NC_017999.1 698955 699023 R hypothetical protein complement(698955..699023) Bifidobacterium bifidum BGN4 13069550 YP_006394039.1 CDS galM NC_017999.1 699136 700092 R COG2017:Galactose mutarotase and related enzymes; putative galactose mutarotase complement(699136..700092) Bifidobacterium bifidum BGN4 13069551 YP_006394040.1 CDS ispH NC_017999.1 700323 701312 D COG0761:Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphatereductase 700323..701312 Bifidobacterium bifidum BGN4 13069552 YP_006394041.1 CDS apuB NC_017999.1 701367 701588 D ApuB 701367..701588 Bifidobacterium bifidum BGN4 13069553 YP_006394042.1 CDS ybaK NC_017999.1 701732 702250 D COG2606:Uncharacterized conserved protein; transcriptional regulator 701732..702250 Bifidobacterium bifidum BGN4 13069554 YP_006394043.1 CDS gap NC_017999.1 702388 703443 R COG0057:Glyceraldehyde-3- phosphatedehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(702388..703443) Bifidobacterium bifidum BGN4 13069555 YP_006394044.1 CDS BBB_0571 NC_017999.1 703650 704378 R COG1564:Thiamine pyrophosphokinase; thiamine pyrophosphokinase complement(703650..704378) Bifidobacterium bifidum BGN4 13069556 YP_006394045.1 CDS BBB_0572 NC_017999.1 704436 704672 D hypothetical protein 704436..704672 Bifidobacterium bifidum BGN4 13069557 YP_006394046.1 CDS BBB_0573 NC_017999.1 704685 704810 D hypothetical protein 704685..704810 Bifidobacterium bifidum BGN4 13069558 YP_006394047.1 CDS BBB_0574 NC_017999.1 704892 705050 R hypothetical protein complement(704892..705050) Bifidobacterium bifidum BGN4 13069559 YP_006394048.1 CDS infC NC_017999.1 705049 705744 D COG0290:Translation initiation factor 3 (IF-3); translation initiation factor IF-3 705049..705744 Bifidobacterium bifidum BGN4 13069560 YP_006394049.1 CDS rpmI NC_017999.1 705763 705957 D COG0291:Ribosomal protein L35; 50S ribosomal protein L35 705763..705957 Bifidobacterium bifidum BGN4 13069561 YP_006394050.1 CDS rplT NC_017999.1 706005 706388 D COG0292:Ribosomal protein L20; 50S ribosomal protein L20 706005..706388 Bifidobacterium bifidum BGN4 13069562 YP_006394051.1 CDS xerD NC_017999.1 706537 707505 D COG4974:Site-specific recombinase XerD; tyrosine recombinase 706537..707505 Bifidobacterium bifidum BGN4 13069563 YP_006394052.1 CDS soj NC_017999.1 707693 708586 D COG1192:ATPases involved in chromosomepartitioning; sporulation initiation inhibitor protein 707693..708586 Bifidobacterium bifidum BGN4 13069564 YP_006394053.1 CDS scpA NC_017999.1 708623 709477 D COG1354:Uncharacterized conserved protein; segregation and condensation protein A 708623..709477 Bifidobacterium bifidum BGN4 13069565 YP_006394054.1 CDS scpB NC_017999.1 709574 710146 D COG1386:Predicted transcriptional regulatorcontaining the HTH domain; segregation and condensation protein B 709574..710146 Bifidobacterium bifidum BGN4 13069566 YP_006394055.1 CDS nudF NC_017999.1 710316 711128 D COG1051:ADP-ribose pyrophosphatase; ADP-ribose pyrophosphatase 710316..711128 Bifidobacterium bifidum BGN4 13069567 YP_006394056.1 CDS nadA NC_017999.1 711246 712526 D COG0379:Quinolinate synthase; quinolinate synthetase complex subunit A 711246..712526 Bifidobacterium bifidum BGN4 13069568 YP_006394057.1 CDS nadB NC_017999.1 712579 714228 D COG0029:Aspartate oxidase; L-aspartate oxidase 712579..714228 Bifidobacterium bifidum BGN4 13069569 YP_006394058.1 CDS nadC NC_017999.1 714426 715319 D COG0157:Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide diphosphorylase 714426..715319 Bifidobacterium bifidum BGN4 13069570 YP_006394059.1 CDS iscS NC_017999.1 715322 716599 D COG1104:Cysteine sulfinate desulfinase/cysteinedesulfurase and related enzymes; putative cysteine desulfurase 715322..716599 Bifidobacterium bifidum BGN4 13069571 YP_006394060.1 CDS typA NC_017999.1 716780 718702 D COG1217:Predicted membrane GTPase involved instress response; GTP-binding protein 716780..718702 Bifidobacterium bifidum BGN4 13069572 YP_006394061.1 CDS BBB_0588 NC_017999.1 719336 719869 D alcohol dehydrogenase 719336..719869 Bifidobacterium bifidum BGN4 13069573 YP_006394062.1 CDS pheA NC_017999.1 719869 720897 D COG0077:Prephenate dehydratase; prephenate dehydratase 719869..720897 Bifidobacterium bifidum BGN4 13069574 YP_006394063.1 CDS tyrA NC_017999.1 720891 721928 D COG0287:Prephenate dehydrogenase; prephenate dehydrogenase 720891..721928 Bifidobacterium bifidum BGN4 13069575 YP_006394064.1 CDS BBB_0591 NC_017999.1 722003 722254 R hypothetical protein complement(722003..722254) Bifidobacterium bifidum BGN4 13069576 YP_006394065.1 CDS xerC NC_017999.1 722253 723344 D COG0582:Integrase; tyrosine recombinase 722253..723344 Bifidobacterium bifidum BGN4 13069577 YP_006394066.1 CDS BBB_0593 NC_017999.1 723741 724724 D COG0601:ABC-type dipeptide/oligopeptide/nickeltransport systems, permease components; putative peptide transport permease protein 723741..724724 Bifidobacterium bifidum BGN4 13069578 YP_006394067.1 CDS BBB_0594 NC_017999.1 724746 725690 D COG1173:ABC-type dipeptide/oligopeptide/nickeltransport systems, permease components; putative peptide transport permease protein 724746..725690 Bifidobacterium bifidum BGN4 13069579 YP_006394068.1 CDS BBB_0595 NC_017999.1 725834 727906 D COG1123:ATPase components of various ABC-typetransport systems, contain duplicated ATPase; ABC transporter ATP-binding protein 725834..727906 Bifidobacterium bifidum BGN4 13069580 YP_006394069.1 CDS BBB_0596 NC_017999.1 728079 729860 D COG0747:ABC-type dipeptide transportsystem, periplasmic component; putative peptide ABC transporter solute-binding protein 728079..729860 Bifidobacterium bifidum BGN4 13069581 YP_006394070.1 CDS pepC NC_017999.1 730060 731484 R COG3579:Aminopeptidase C; aminopeptidase C complement(730060..731484) Bifidobacterium bifidum BGN4 13069582 YP_006394071.1 CDS apex NC_017999.1 731631 732488 D COG0708:Exonuclease III; DNA-(apurinic or apyrimidinic site) lyase 731631..732488 Bifidobacterium bifidum BGN4 13069583 YP_006394072.1 CDS BBB_0599 NC_017999.1 732628 733449 D hypothetical protein 732628..733449 Bifidobacterium bifidum BGN4 13069584 YP_006394073.1 CDS BBB_0600 NC_017999.1 733489 734262 D ABC-type Mn2+/Zn2+ transport systems, permease component 733489..734262 Bifidobacterium bifidum BGN4 13069585 YP_006394074.1 CDS trmA NC_017999.1 734288 735550 D COG2265:SAM-dependent methyl transferases related totRNA (uracil-5-)-methyl transferase; SAM-dependent methyl transferase 734288..735550 Bifidobacterium bifidum BGN4 13069586 YP_006394075.1 CDS BBB_0602 NC_017999.1 735591 736169 D sugar ABC transporter periplasmic protein 735591..736169 Bifidobacterium bifidum BGN4 13069587 YP_006394076.1 CDS ctpE NC_017999.1 736466 739006 D COG0474:Cation transport ATPase; putative cation-transporting ATPase E 736466..739006 Bifidobacterium bifidum BGN4 13069588 YP_006394077.1 CDS acnA NC_017999.1 739079 741784 D COG1048:Aconitase A; aconitate hydratase 739079..741784 Bifidobacterium bifidum BGN4 13069589 YP_006394078.1 CDS BBB_0605 NC_017999.1 742094 742981 D hypothetical protein 742094..742981 Bifidobacterium bifidum BGN4 13069590 YP_006394079.1 CDS ilvD NC_017999.1 743337 745199 R COG0129:Dihydroxyacid dehydratase/phosphogluconatedehydratase; dihydroxy-acid dehydratase complement(743337..745199) Bifidobacterium bifidum BGN4 13069591 YP_006394080.1 CDS rpoZ NC_017999.1 745430 745753 D COG1758:DNA-directed RNA polymerase, subunitK/omega; DNA-directed RNA polymerase subunit omega 745430..745753 Bifidobacterium bifidum BGN4 13069592 YP_006394081.1 CDS metK NC_017999.1 746004 747221 D COG0192:S-adenosylmethionine synthetase; methionine adenosyl transferase 746004..747221 Bifidobacterium bifidum BGN4 13069593 YP_006394082.1 CDS priA NC_017999.1 747408 749648 D COG1198:Primosomal protein N' (replication factorY) - superfamily II helicase; putative primosomal protein 747408..749648 Bifidobacterium bifidum BGN4 13069594 YP_006394083.1 CDS BBB_0610 NC_017999.1 749849 750007 R hypothetical protein complement(749849..750007) Bifidobacterium bifidum BGN4 13069595 YP_006394084.1 CDS BBB_0611 NC_017999.1 750494 751198 D COG1011:Predicted hydrolase (HAD superfamily); putative alpha beta hydrolase 750494..751198 Bifidobacterium bifidum BGN4 13069596 YP_006394085.1 CDS fmt NC_017999.1 751289 752263 D COG0223:Methionyl-tRNA formyl transferase; methionyl-tRNA formyl transferase 751289..752263 Bifidobacterium bifidum BGN4 13069597 YP_006394086.1 CDS serB NC_017999.1 752451 753206 R COG0560:Phosphoserine phosphatase; phosphoserine phosphatase complement(752451..753206) Bifidobacterium bifidum BGN4 13069598 YP_006394087.1 CDS BBB_0614 NC_017999.1 753604 755118 D COG0464:ATPases of the AAA+ class; putative AAA family ATPase 753604..755118 Bifidobacterium bifidum BGN4 13069599 YP_006394088.1 CDS BBB_0615 NC_017999.1 755115 756755 D putative proteasome component 755115..756755 Bifidobacterium bifidum BGN4 13069600 YP_006394089.1 CDS suhB NC_017999.1 756902 757735 D COG0483:Archaeal fructose-1, 6-bisphosphatase and related enzymes of inositol monophosphatase family; inositol-1-monophosphatase 756902..757735 Bifidobacterium bifidum BGN4 13069601 YP_006394090.1 CDS BBB_0617 NC_017999.1 757889 758092 D hypothetical protein 757889..758092 Bifidobacterium bifidum BGN4 13069602 YP_006394091.1 CDS BBB_0618 NC_017999.1 758089 759549 D hypothetical protein 758089..759549 Bifidobacterium bifidum BGN4 13069603 YP_006394092.1 CDS hup NC_017999.1 759720 760001 R COG0776:Bacterial nucleoid DNA-binding protein; DNA-binding protein complement(759720..760001) Bifidobacterium bifidum BGN4 13069604 YP_006394093.1 CDS BBB_0620 NC_017999.1 760132 762636 R COG0392:Predicted integral membrane protein; hypothetical protein complement(760132..762636) Bifidobacterium bifidum BGN4 13069605 YP_006394094.1 CDS purB NC_017999.1 762689 764125 R COG0015:Adenylosuccinate lyase; adenylosuccinate lyase complement(762689..764125) Bifidobacterium bifidum BGN4 13069606 YP_006394095.1 CDS BBB_0622 NC_017999.1 764284 765588 R alpha/beta hydrolase complement(764284..765588) Bifidobacterium bifidum BGN4 13069607 YP_006394096.1 CDS BBB_0623 NC_017999.1 765816 766130 R hypothetical protein complement(765816..766130) Bifidobacterium bifidum BGN4 13069608 YP_006394097.1 CDS BBB_0624 NC_017999.1 766145 766270 D hypothetical protein 766145..766270 Bifidobacterium bifidum BGN4 13069609 YP_006394098.1 CDS ebpS NC_017999.1 766723 767205 R cell surface elastin binding protein complement(766723..767205) Bifidobacterium bifidum BGN4 13069610 YP_006394099.1 CDS BBB_0626 NC_017999.1 767340 768368 R von Willebrand factor, type A complement(767340..768368) Bifidobacterium bifidum BGN4 13069611 YP_006394100.1 CDS BBB_0627 NC_017999.1 768365 769423 R putative von Willebrand factor type A complement(768365..769423) Bifidobacterium bifidum BGN4 13069612 YP_006394101.1 CDS BBB_0628 NC_017999.1 769438 769974 R hypothetical protein complement(769438..769974) Bifidobacterium bifidum BGN4 13069613 YP_006394102.1 CDS BBB_0629 NC_017999.1 770007 770996 R COG1721:Uncharacterized conserved protein (somemembers contain a von Willebrand factor type A (vWA)domain); hypothetical protein complement(770007..770996) Bifidobacterium bifidum BGN4 13069614 YP_006394103.1 CDS moxR NC_017999.1 770993 772099 R COG0714:MoxR-like ATPases; methanol dehydrogenase regulator complement(770993..772099) Bifidobacterium bifidum BGN4 13069615 YP_006394104.1 CDS ung NC_017999.1 772110 772805 R COG0692:Uracil DNA glycosylase; uracil-DNA glycosylase complement(772110..772805) Bifidobacterium bifidum BGN4 13069616 YP_006394105.1 CDS BBB_0632 NC_017999.1 772982 773728 D hypothetical protein 772982..773728 Bifidobacterium bifidum BGN4 13069617 YP_006394106.1 CDS cspA NC_017999.1 773884 774087 D COG1278:Cold shock proteins; putative cold shock protein 773884..774087 Bifidobacterium bifidum BGN4 13069618 YP_006394107.1 CDS groL NC_017999.1 774387 776012 D COG0459:Chaperonin GroEL (HSP60 family); chaperonin 774387..776012 Bifidobacterium bifidum BGN4 13069619 YP_006394108.1 CDS BBB_0635 NC_017999.1 776173 776466 R hypothetical protein complement(776173..776466) Bifidobacterium bifidum BGN4 13069620 YP_006394109.1 CDS BBB_0636 NC_017999.1 776683 777684 D hypothetical protein 776683..777684 Bifidobacterium bifidum BGN4 13069621 YP_006394110.1 CDS BBB_0637 NC_017999.1 777668 778405 D COG0745:Response regulators consisting of aCheY-like receiver domain and a winged-helix DNA-bindingdomain; response regulator of two- component system 777668..778405 Bifidobacterium bifidum BGN4 13069622 YP_006394111.1 CDS baeS NC_017999.1 778485 780365 D COG0642:Signal transduction histidine kinase; signal transduction histidine- protein kinase 778485..780365 Bifidobacterium bifidum BGN4 13069623 YP_006394112.1 CDS csp NC_017999.1 780482 780871 D COG1278:Cold shock proteins; putative cold shock protein 780482..780871 Bifidobacterium bifidum BGN4 13069624 YP_006394113.1 CDS BBB_0640 NC_017999.1 780890 781963 D hypothetical protein 780890..781963 Bifidobacterium bifidum BGN4 13069625 YP_006394114.1 CDS uspA NC_017999.1 782114 783109 R COG0589:Universal stress protein UspA and relatednucleotide-binding proteins; universal stress protein complement(782114..783109) Bifidobacterium bifidum BGN4 13069626 YP_006394115.1 CDS clpA NC_017999.1 783246 785822 D COG0542:ATPases with chaperone activity, ATP-binding subunit; putative ATP-dependent Clp protease ATP-binding subunit 783246..785822 Bifidobacterium bifidum BGN4 13069627 YP_006394116.1 CDS BBB_0643 NC_017999.1 786182 786397 D hypothetical protein 786182..786397 Bifidobacterium bifidum BGN4 13069628 YP_006394117.1 CDS BBB_0644 NC_017999.1 786418 786600 D hypothetical protein 786418..786600 Bifidobacterium bifidum BGN4 13069629 YP_006394118.1 CDS BBB_0645 NC_017999.1 786689 786868 D hypothetical protein 786689..786868 Bifidobacterium bifidum BGN4 13069630 YP_006394119.1 CDS BBB_0646 NC_017999.1 786888 787004 D hypothetical protein 786888..787004 Bifidobacterium bifidum BGN4 13069631 YP_006394120.1 CDS BBB_0647 NC_017999.1 787168 788589 R DNA repair related putative ATPase complement(787168..788589) Bifidobacterium bifidum BGN4 13069632 YP_006394121.1 CDS hisS NC_017999.1 788677 790071 D COG0124:Histidyl-tRNA synthetase; histidyl-tRNA synthetase 788677..790071 Bifidobacterium bifidum BGN4 13069633 YP_006394122.1 CDS aspS NC_017999.1 790155 791951 D COG0173:Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 790155..791951 Bifidobacterium bifidum BGN4 13069634 YP_006394123.1 CDS vraR NC_017999.1 792293 792802 D COG2197:Response regulator containing a CheY-likereceiver domain and an HTH DNA-binding domain; response regulator protein 792293..792802 Bifidobacterium bifidum BGN4 13069635 YP_006394124.1 CDS BBB_0651 NC_017999.1 792880 793386 D COG2606:Uncharacterized conserved protein; YbaK/prolyl-tRNA synthetase 792880..793386 Bifidobacterium bifidum BGN4 13069636 YP_006394125.1 CDS gluA NC_017999.1 793481 794281 D COG1126:ABC-type polar amino acid transportsystem, ATPase component; glutamate transport ATP-binding protein 793481..794281 Bifidobacterium bifidum BGN4 13069637 YP_006394126.1 CDS gluB NC_017999.1 794297 795136 D COG0834:ABC-type amino acid transport/signaltransduction systems, periplasmic component/domain; glutamate-binding protein 794297..795136 Bifidobacterium bifidum BGN4 13069638 YP_006394127.1 CDS gluC NC_017999.1 795138 795815 D COG0765:ABC-type amino acid transportsystem, permease component; glutamate transport system permease 795138..795815 Bifidobacterium bifidum BGN4 13069639 YP_006394128.1 CDS gluD NC_017999.1 795820 796908 D COG0765:ABC-type amino acid transportsystem, permease component; glutamate transport system permease 795820..796908 Bifidobacterium bifidum BGN4 13069640 YP_006394129.1 CDS BBB_0656 NC_017999.1 797038 798114 D COG2326:Uncharacterized conserved protein; hypothetical protein 797038..798114 Bifidobacterium bifidum BGN4 13069641 YP_006394130.1 CDS helY NC_017999.1 798172 800733 D COG4581:Superfamily II RNA helicase; putative helicase 798172..800733 Bifidobacterium bifidum BGN4 13069642 YP_006394131.1 CDS BBB_0658 NC_017999.1 800832 802238 D COG2256:ATPase related to the helicase subunit ofthe Holliday junction resolvase; putative AAA domain containing protein 800832..802238 Bifidobacterium bifidum BGN4 13069643 YP_006394132.1 CDS BBB_0659 NC_017999.1 802412 803878 D COG0477:Permeases of the major facilitatorsuperfamily; putative efflux-type transporter 802412..803878 Bifidobacterium bifidum BGN4 13069644 YP_006394133.1 CDS BBB_0660 NC_017999.1 803903 806368 R COG1122:ABC-type cobalt transport system, ATPase component; ABC transporter ATP-binding protein complement(803903..806368) Bifidobacterium bifidum BGN4 13069645 YP_006394134.1 CDS BBB_0661 NC_017999.1 806545 807165 R COG3601:Predicted membrane protein; hypothetical protein complement(806545..807165) Bifidobacterium bifidum BGN4 13069646 YP_006394135.1 CDS ppgK NC_017999.1 807540 808301 D COG1940:Transcriptional regulator/sugar kinase; polyphosphate glucokinase 807540..808301 Bifidobacterium bifidum BGN4 13069647 YP_006394136.1 CDS BBB_0663 NC_017999.1 808395 809585 D COG0436:Aspartate/tyrosine/aromaticamino transferase; putative amino transferase 808395..809585 Bifidobacterium bifidum BGN4 13069648 YP_006394137.1 CDS BBB_0664 NC_017999.1 809710 810594 R COG1122:ABC-type cobalt transport system, ATPase component; ABC transporter ATP-binding protein complement(809710..810594) Bifidobacterium bifidum BGN4 13069649 YP_006394138.1 CDS BBB_0665 NC_017999.1 810619 811035 R arylsulfate sulfo transferase complement(810619..811035) Bifidobacterium bifidum BGN4 13069650 YP_006394139.1 CDS BBB_0666 NC_017999.1 811181 813373 R putative PMT family glycosyl transferase complement(811181..813373) Bifidobacterium bifidum BGN4 13069651 YP_006394140.1 CDS BBB_0667 NC_017999.1 813535 816933 D hypothetical protein 813535..816933 Bifidobacterium bifidum BGN4 13069652 YP_006394141.1 CDS ligA NC_017999.1 817020 819722 D COG0272:NAD-dependent DNA ligase (contains BRCTdomain type II); DNA ligase, NAD-dependent protein 817020..819722 Bifidobacterium bifidum BGN4 13069653 YP_006394142.1 CDS mrp NC_017999.1 819948 821072 D COG0489:ATPases involved in chromosomepartitioning; mitogen-regulated protein 819948..821072 Bifidobacterium bifidum BGN4 13069654 YP_006394143.1 CDS BBB_0670 NC_017999.1 821200 822033 R hypothetical protein complement(821200..822033) Bifidobacterium bifidum BGN4 13069655 YP_006394144.1 CDS xerC NC_017999.1 822660 823793 D COG0582:Integrase; putative tyrosine recombinase 822660..823793 Bifidobacterium bifidum BGN4 13069656 YP_006394145.1 CDS xhoI NC_017999.1 823922 825529 D COG1002:Type II restriction enzyme, methylase subunits; modification methylase 823922..825529 Bifidobacterium bifidum BGN4 13069657 YP_006394146.1 CDS BBB_0673 NC_017999.1 826440 827312 R hypothetical protein complement(826440..827312) Bifidobacterium bifidum BGN4 13069658 YP_006394147.1 CDS BBB_0674 NC_017999.1 827374 827940 R hypothetical protein complement(827374..827940) Bifidobacterium bifidum BGN4 13069659 YP_006394148.1 CDS BBB_0675 NC_017999.1 828083 828481 D hypothetical protein 828083..828481 Bifidobacterium bifidum BGN4 13069660 YP_006394149.1 CDS BBB_0676 NC_017999.1 828478 828651 D hypothetical protein 828478..828651 Bifidobacterium bifidum BGN4 13069661 YP_006394150.1 CDS BBB_0677 NC_017999.1 828620 829750 D COG1674:DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein, FtsK/SpoIIIE 828620..829750 Bifidobacterium bifidum BGN4 13069662 YP_006394151.1 CDS BBB_0678 NC_017999.1 829893 830921 D hypothetical protein 829893..830921 Bifidobacterium bifidum BGN4 13069663 YP_006394152.1 CDS BBB_0679 NC_017999.1 830927 831139 D hypothetical protein 830927..831139 Bifidobacterium bifidum BGN4 13069664 YP_006394153.1 CDS glnA NC_017999.1 831252 832700 R COG0174:Glutamine synthetase; glutamine synthetase, type I complement(831252..832700) Bifidobacterium bifidum BGN4 13069665 YP_006394154.1 CDS BBB_0681 NC_017999.1 833016 833813 R integral membrane protein complement(833016..833813) Bifidobacterium bifidum BGN4 13069666 YP_006394155.1 CDS lpdA NC_017999.1 833919 835409 R COG1249:Pyruvate/2-oxoglutarate dehydrogenasecomplex, dihydrolipoamide dehydrogenase (E3) component, andre; dihydrolipoyl dehydrogenase complement(833919..835409) Bifidobacterium bifidum BGN4 13069667 YP_006394156.1 CDS BBB_0683 NC_017999.1 835662 836264 R hypothetical protein complement(835662..836264) Bifidobacterium bifidum BGN4 13069668 YP_006394157.1 CDS argE NC_017999.1 836407 837774 D COG0624:Acetylornithinedeacetylase/Succinyl- diaminopimelate desuccinylase and related deacylases; acetylornithinedeacetylase/Succinyl- diaminopimelate desuccinylase 836407..837774 Bifidobacterium bifidum BGN4 13069669 YP_006394158.1 CDS BBB_0685 NC_017999.1 838292 839392 D hypothetical protein 838292..839392 Bifidobacterium bifidum BGN4 13069670 YP_006394159.1 CDS lolD NC_017999.1 839455 840210 D COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; lipo protein-releasing system ATP-binding protein 839455..840210 Bifidobacterium bifidum BGN4 13069671 YP_006394160.1 CDS BBB_0687 NC_017999.1 840207 841289 D hypothetical protein 840207..841289 Bifidobacterium bifidum BGN4 13069672 YP_006394161.1 CDS nagZ NC_017999.1 841304 842590 R COG1472:Beta-glucosidase- related glycosidases; beta-hexosaminidase complement(841304..842590) Bifidobacterium bifidum BGN4 13069673 YP_006394162.1 CDS BBB_0689 NC_017999.1 842707 845970 D COG1615:Uncharacterized conserved protein; hypothetical protein 842707..845970 Bifidobacterium bifidum BGN4 13069674 YP_006394163.1 CDS tarK NC_017999.1 846478 847599 R COG1887:Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesisTagF/TagB/Eps; putative ribitolphospho transferase complement(846478..847599) Bifidobacterium bifidum BGN4 13069675 YP_006394164.1 CDS BBB_0691 NC_017999.1 848273 849607 D COG1887:Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesisTagF/TagB/Eps; CDP- glycerol:poly(Glycerophosphate)glycerophospho transferase 848273..849607 Bifidobacterium bifidum BGN4 13069676 YP_006394165.1 CDS BBB_0692 NC_017999.1 849628 850797 D putative acyl transferase 849628..850797 Bifidobacterium bifidum BGN4 13069677 YP_006394166.1 CDS BBB_0693 NC_017999.1 850817 851038 D hypothetical protein 850817..851038 Bifidobacterium bifidum BGN4 13069678 YP_006394167.1 CDS BBB_0694 NC_017999.1 851118 851333 D hypothetical protein 851118..851333 Bifidobacterium bifidum BGN4 13069679 YP_006394168.1 CDS ispD NC_017999.1 851475 852191 D COG1211:4-diphosphocytidyl-2-methyl-D- erithritolsynthase; 2-C-methyl-D-erythritol 4-phosphatecytidylyl transferase 851475..852191 Bifidobacterium bifidum BGN4 13069680 YP_006394169.1 CDS BBB_0696 NC_017999.1 852218 853261 D COG0451:Nucleoside-diphosphate-sugar epimerases; putative nucleotide sugar dehydratase 852218..853261 Bifidobacterium bifidum BGN4 13069681 YP_006394170.1 CDS tagG NC_017999.1 853315 854121 D COG1682:ABC-type polysaccharide/polyol phosphateexport systems, permease component; teichoic acid translocation permease 853315..854121 Bifidobacterium bifidum BGN4 13069682 YP_006394171.1 CDS tagH NC_017999.1 854144 854902 D COG1134:ABC-type polysaccharide/polyol phosphatetransport system, ATPase component; teichoic acids export ATP-binding protein 854144..854902 Bifidobacterium bifidum BGN4 13069683 YP_006394172.1 CDS bar NC_017999.1 855268 855810 D COG1247:Sortase and related acyl transferases; phosphinothricin N-acetyl transferase 855268..855810 Bifidobacterium bifidum BGN4 13069684 YP_006394173.1 CDS pth NC_017999.1 855814 856413 D COG0193:Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 855814..856413 Bifidobacterium bifidum BGN4 13069685 YP_006394174.1 CDS mfd NC_017999.1 856403 860002 D COG1197:Transcription-repair coupling factor(superfamily II helicase); transcription-repair coupling factor 856403..860002 Bifidobacterium bifidum BGN4 13069686 YP_006394175.1 CDS pabB NC_017999.1 859999 861516 D COG0147:Anthranilate/para-aminobenzoate synthases component I; para-aminobenzoate synthase component 859999..861516 Bifidobacterium bifidum BGN4 13069687 YP_006394176.1 CDS pabC NC_017999.1 861509 862297 D COG0115:Branched-chain amino acidamino transferase/4-amino-4-deoxychorismate lyase; aminodeoxychorismate lyase 861509..862297 Bifidobacterium bifidum BGN4 13069688 YP_006394177.1 CDS eno NC_017999.1 862495 863793 D COG0148:Enolase; phosphopyruvate hydratase 862495..863793 Bifidobacterium bifidum BGN4 13069689 YP_006394178.1 CDS BBB_0705 NC_017999.1 863884 864417 D COG2919:Septum formation initiator; hypothetical protein 863884..864417 Bifidobacterium bifidum BGN4 13069690 YP_006394179.1 CDS BBB_0706 NC_017999.1 864504 865091 D COG1507:Uncharacterized conserved protein; hypothetical protein 864504..865091 Bifidobacterium bifidum BGN4 13069691 YP_006394180.1 CDS BBB_0707 NC_017999.1 865088 865276 R hypothetical protein complement(865088..865276) Bifidobacterium bifidum BGN4 13069692 YP_006394181.1 CDS aroB NC_017999.1 865239 866237 D COG0248:Exopolyphosphatase; bifunctional 3-dehydroquinatesynthase/phosphatase 865239..866237 Bifidobacterium bifidum BGN4 13069693 YP_006394182.1 CDS BBB_0709 NC_017999.1 866436 867005 D 4-hydroxybenzoate polyprenyl transferase and related prenyl transferase 866436..867005 Bifidobacterium bifidum BGN4 13069695 YP_006394183.1 CDS sdaA NC_017999.1 867182 868642 D COG1760:L-serine deaminase; L-serine ammonia-lyase 867182..868642 Bifidobacterium bifidum BGN4 13069696 YP_006394184.1 CDS fkbP NC_017999.1 868803 869207 D COG0545:FKBP-type peptidyl-prolyl cis-transisomerases 1; FKBP-type peptidyl-prolyl cis-trans isomerase 868803..869207 Bifidobacterium bifidum BGN4 13069697 YP_006394185.1 CDS greA NC_017999.1 869266 869745 D COG0782:Transcription elongation factor; transcription elongation factor 869266..869745 Bifidobacterium bifidum BGN4 13069698 YP_006394186.1 CDS BBB_0713 NC_017999.1 870179 870331 D hypothetical protein 870179..870331 Bifidobacterium bifidum BGN4 13069699 YP_006394187.1 CDS BBB_0714 NC_017999.1 870520 870636 D hypothetical protein 870520..870636 Bifidobacterium bifidum BGN4 13069700 YP_006394188.1 CDS BBB_0715 NC_017999.1 870985 871194 D hypothetical protein 870985..871194 Bifidobacterium bifidum BGN4 13069701 YP_006394189.1 CDS BBB_0716 NC_017999.1 871219 871806 D hypothetical protein 871219..871806 Bifidobacterium bifidum BGN4 13069702 YP_006394190.1 CDS BBB_0717 NC_017999.1 872289 873176 R COG1272:Predicted membrane protein, hemolysin IIIhomolog; hypothetical protein complement(872289..873176) Bifidobacterium bifidum BGN4 13069703 YP_006394191.1 CDS baeS NC_017999.1 873313 874797 D COG3920:Signal transduction histidine kinase; histidine kinase 873313..874797 Bifidobacterium bifidum BGN4 13069704 YP_006394192.1 CDS wblE NC_017999.1 874932 875210 R WhiB-type transcription regulator complement(874932..875210) Bifidobacterium bifidum BGN4 13069705 YP_006394193.1 CDS BBB_0720 NC_017999.1 875326 877356 R COG1674:DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein, FtsK/SpoIIIE complement(875326..877356) Bifidobacterium bifidum BGN4 13069706 YP_006394194.1 CDS lytR NC_017999.1 877404 878879 R COG1316:Transcriptional regulator; membrane-bound protein complement(877404..878879) Bifidobacterium bifidum BGN4 13069707 YP_006394195.1 CDS whiB NC_017999.1 879161 879460 D WhiB-type transcription regulator 879161..879460 Bifidobacterium bifidum BGN4 13069708 YP_006394196.1 CDS BBB_0723 NC_017999.1 879494 882643 D regulatory protein 879494..882643 Bifidobacterium bifidum BGN4 13069709 YP_006394197.1 CDS BBB_0724 NC_017999.1 882640 884151 D hypothetical protein 882640..884151 Bifidobacterium bifidum BGN4 13069710 YP_006394198.1 CDS BBB_0725 NC_017999.1 884224 884661 R hypothetical protein complement(884224..884661) Bifidobacterium bifidum BGN4 13069711 YP_006394199.1 CDS pmmC NC_017999.1 884731 885558 D COG0561:Predicted hydrolases of the HADsuperfamily; phosphomannomutase 884731..885558 Bifidobacterium bifidum BGN4 13069712 YP_006394200.1 CDS BBB_0727 NC_017999.1 885562 886278 D COG1040:Predicted amidophosphoribosyl transferases; amidophosphoribosyl transferase-like protein 885562..886278 Bifidobacterium bifidum BGN4 13069713 YP_006394201.1 CDS impA NC_017999.1 886385 886852 R COG1974:SOS-response transcriptional repressors(RecA-mediated autopeptidases); protein ImpA complement(886385..886852) Bifidobacterium bifidum BGN4 13069714 YP_006394202.1 CDS baeS NC_017999.1 886849 887955 R COG0642:Signal transduction histidine kinase; signal transduction histidine- protein kinase complement(886849..887955) Bifidobacterium bifidum BGN4 13069715 YP_006394203.1 CDS mtrA NC_017999.1 887955 888674 R COG0745:Response regulators consisting of aCheY-like receiver domain and a winged-helix DNA-bindingdomain; DNA-binding response regulator complement(887955..888674) Bifidobacterium bifidum BGN4 13069716 YP_006394204.1 CDS glgB NC_017999.1 888688 890943 R COG0296:1,4-alpha-glucan branching enzyme; 1,4-alpha-glucan branching protein complement(888688..890943) Bifidobacterium bifidum BGN4 13069717 YP_006394205.1 CDS BBB_0732 NC_017999.1 891071 891667 D COG1329:Transcriptional regulators, similar to M.xanthus CarD; transcriptional regulator 891071..891667 Bifidobacterium bifidum BGN4 13069718 YP_006394206.1 CDS ispF NC_017999.1 891680 892162 D COG0245:2C-methyl-D-erythritol 2, 4-cyclodiphosphatesynthase; 2C-methyl-D-erythritol 2, 4-cyclodiphosphatesynthase 891680..892162 Bifidobacterium bifidum BGN4 13069719 YP_006394207.1 CDS znuB NC_017999.1 892173 893009 R COG1108:ABC-type Mn2+/Zn2+ transportsystems, permease components; high-affinity zinc uptake system membrane protein complement(892173..893009) Bifidobacterium bifidum BGN4 13069720 YP_006394208.1 CDS phnC NC_017999.1 893006 893896 R COG1121:ABC-type Mn/Zn transport systems, ATPase component; phosphonates import ATP-binding protein complement(893006..893896) Bifidobacterium bifidum BGN4 13069721 YP_006394209.1 CDS adcA NC_017999.1 894064 895158 R COG0803:ABC-type metal ion transportsystem, periplasmic component/surface adhesin; zinc-binding lipo protein complement(894064..895158) Bifidobacterium bifidum BGN4 13069722 YP_006394210.1 CDS folD NC_017999.1 895221 896096 D COG0190:5, 10-methylene-tetrahydrofolatedehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; 5, 10-methylene-tetrahydrofolatedehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 895221..896096 Bifidobacterium bifidum BGN4 13069723 YP_006394211.1 CDS rpsA NC_017999.1 896244 897716 D COG0539:Ribosomal protein S1; 30S ribosomal protein S1 896244..897716 Bifidobacterium bifidum BGN4 13069724 YP_006394212.1 CDS coaE NC_017999.1 898040 898648 D COG0237:Dephospho-CoA kinase; dephospho-CoA kinase 898040..898648 Bifidobacterium bifidum BGN4 13069725 YP_006394213.1 CDS uvrB NC_017999.1 898827 900938 D COG0556:Helicase subunit of the DNA excision repaircomplex; excinuclease ABC subunit B 898827..900938 Bifidobacterium bifidum BGN4 13069726 YP_006394214.1 CDS terC NC_017999.1 900986 901975 D COG0861:Membrane protein TerC, possibly involved intellurium resistance; hypothetical protein 900986..901975 Bifidobacterium bifidum BGN4 13069727 YP_006394215.1 CDS pyk NC_017999.1 902117 903559 D COG0469:Pyruvate kinase; pyruvate kinase 902117..903559 Bifidobacterium bifidum BGN4 13069728 YP_006394216.1 CDS nudF NC_017999.1 903729 904328 R COG0494:NTP pyrophosphohydrolases includingoxidative damage repair enzymes; ADP-ribose pyrophosphatase complement(903729..904328) Bifidobacterium bifidum BGN4 13069729 YP_006394217.1 CDS amiR NC_017999.1 904736 905512 D COG3707:Response regulator with putativeantiterminator output domain; putative two- component system responseregulator 904736..905512 Bifidobacterium bifidum BGN4 13069731 YP_006394218.1 CDS polA NC_017999.1 905509 908340 D COG0749:DNA polymerase I - 3'-5' exonuclease andpolymerase domains; DNA polymerase I 905509..908340 Bifidobacterium bifidum BGN4 13069732 YP_006394219.1 CDS BBB_0746 NC_017999.1 908398 909315 D COG0327:Uncharacterized conserved protein; hypothetical protein 908398..909315 Bifidobacterium bifidum BGN4 13069733 YP_006394220.1 CDS ndx NC_017999.1 909369 910082 D COG0494:NTP pyrophosphohydrolases includingoxidative damage repair enzymes; putative nudix hydrolase 909369..910082 Bifidobacterium bifidum BGN4 13069734 YP_006394221.1 CDS glgX NC_017999.1 910164 912305 D COG1523:Type II secretory pathway, pullulanase PulAand related glycosidases; glycogen debranching protein 910164..912305 Bifidobacterium bifidum BGN4 13069735 YP_006394222.1 CDS BBB_0749 NC_017999.1 912381 913598 R ABC transporter permease complement(912381..913598) Bifidobacterium bifidum BGN4 13069736 YP_006394223.1 CDS xerC NC_017999.1 914259 914978 R COG0582:Integrase; putative tyrosine recombinase complement(914259..914978) Bifidobacterium bifidum BGN4 13069738 YP_006394224.1 CDS BBB_0751 NC_017999.1 915456 916073 R COG3340:Peptidase E; putative peptidase complement(915456..916073) Bifidobacterium bifidum BGN4 13069739 YP_006394225.1 CDS aroA NC_017999.1 916195 917625 D COG0128:5-enolpyruvylshikimate-3-phosphatesynthase; 3-phosphoshikimate 1-carboxyvinyl transferase 916195..917625 Bifidobacterium bifidum BGN4 13069740 YP_006394226.1 CDS ackA NC_017999.1 917739 918968 R COG0282:Acetate kinase; acetate kinase complement(917739..918968) Bifidobacterium bifidum BGN4 13069741 YP_006394227.1 CDS pta NC_017999.1 919249 920982 R COG0280:Phosphotransacetylase; phosphate acetyl transferase complement(919249..920982) Bifidobacterium bifidum BGN4 13069742 YP_006394228.1 CDS BBB_0755 NC_017999.1 921060 922541 R COG4868:Uncharacterized protein conserved inbacteria; hypothetical protein complement(921060..922541) Bifidobacterium bifidum BGN4 13069743 YP_006394229.1 CDS BBB_0756 NC_017999.1 923106 923777 D hypothetical protein 923106..923777 Bifidobacterium bifidum BGN4 13069744 YP_006394230.1 CDS BBB_0757 NC_017999.1 924139 924339 R hypothetical protein complement(924139..924339) Bifidobacterium bifidum BGN4 13069745 YP_006394231.1 CDS BBB_0758 NC_017999.1 924367 924564 R hypothetical protein complement(924367..924564) Bifidobacterium bifidum BGN4 13069746 YP_006394232.1 CDS BBB_0759 NC_017999.1 924585 925226 R hypothetical protein complement(924585..925226) Bifidobacterium bifidum BGN4 13069747 YP_006394233.1 CDS alpA NC_017999.1 925838 926056 D phage transcriptional regulator 925838..926056 Bifidobacterium bifidum BGN4 13069748 YP_006394234.1 CDS BBB_0761 NC_017999.1 926135 926449 D hypothetical protein 926135..926449 Bifidobacterium bifidum BGN4 13069749 YP_006394235.1 CDS BBB_0762 NC_017999.1 926415 926669 R hypothetical protein complement(926415..926669) Bifidobacterium bifidum BGN4 13069750 YP_006394236.1 CDS BBB_0763 NC_017999.1 926877 927032 D hypothetical protein 926877..927032 Bifidobacterium bifidum BGN4 13069751 YP_006394237.1 CDS linA NC_017999.1 927803 928300 R lincosamide resistance protein complement(927803..928300) Bifidobacterium bifidum BGN4 13069752 YP_006394238.1 CDS yheS NC_017999.1 928385 929929 R COG0488:ATPase components of ABC transporters withduplicated ATPase domains; ABC transporter ATP-binding protein complement(928385..929929) Bifidobacterium bifidum BGN4 13069753 YP_006394239.1 CDS mob NC_017999.1 930787 931962 R Mob complement(930787..931962) Bifidobacterium bifidum BGN4 13069754 YP_006394240.1 CDS BBB_0767 NC_017999.1 932282 933436 R hypothetical protein complement(932282..933436) Bifidobacterium bifidum BGN4 13069755 YP_006394241.1 CDS BBB_0768 NC_017999.1 933426 933761 R hypothetical protein complement(933426..933761) Bifidobacterium bifidum BGN4 13069756 YP_006394242.1 CDS BBB_0769 NC_017999.1 934067 934843 R COG0582:Integrase; site-specific recombinase, phage integrase family protein complement(934067..934843) Bifidobacterium bifidum BGN4 13069757 YP_006394243.1 CDS guaA NC_017999.1 936304 937866 R COG0519:GMP synthase, PP-ATPase domain/ subunit; GMP synthase complement(936304..937866) Bifidobacterium bifidum BGN4 13069758 YP_006394244.1 CDS xfp NC_017999.1 938395 940872 D COG3957:Phosphoketolase; xylulose-5-phosphate/fructose-6- phosphatephosphoketolase 938395..940872 Bifidobacterium bifidum BGN4 13069759 YP_006394245.1 CDS pit NC_017999.1 941119 942171 D COG0306:Phosphate/sulphate permeases; putative low-affinity inorganic phosphate transporter 941119..942171 Bifidobacterium bifidum BGN4 13069760 YP_006394246.1 CDS BBB_0773 NC_017999.1 942222 942845 D COG1392:Phosphate transport regulator (distanthomolog of PhoU); putative pit accessory protein 942222..942845 Bifidobacterium bifidum BGN4 13069761 YP_006394247.1 CDS BBB_0774 NC_017999.1 942895 943587 R COG2197:Response regulator containing a CheY-likereceiver domain and an HTH DNA-binding domain; response regulator of two- component system complement(942895..943587) Bifidobacterium bifidum BGN4 13069762 YP_006394248.1 CDS yxjM NC_017999.1 943584 944867 R COG4585:Signal transduction histidine kinase; putative sensor-like histidine kinase complement(943584..944867) Bifidobacterium bifidum BGN4 13069763 YP_006394249.1 CDS pacL NC_017999.1 944930 945193 D COG0474:Cation transport ATPase; cation-transporting ATPase 944930..945193 Bifidobacterium bifidum BGN4 13069764 YP_006394250.1 CDS nodI NC_017999.1 945340 946323 D COG1131:ABC-type multidrug transport system, ATPase component; Nod factor export ATP-binding protein 945340..946323 Bifidobacterium bifidum BGN4 13069765 YP_006394251.1 CDS BBB_0778 NC_017999.1 946440 947687 D COG0842:ABC-type multidrug transportsystem, permease component; ABC transporter permease 946440..947687 Bifidobacterium bifidum BGN4 13069766 YP_006394252.1 CDS BBB_0779 NC_017999.1 947674 949113 D ABC-type multidrug transport system permease component 947674..949113 Bifidobacterium bifidum BGN4 13069767 YP_006394253.1 CDS recG NC_017999.1 949118 950596 R COG2865:Predicted transcriptional regulatorcontaining an HTH domain and an uncharacterized domainshared wi; ATP-dependent DNA helicase complement(949118..950596) Bifidobacterium bifidum BGN4 13069768 YP_006394254.1 CDS BBB_0781 NC_017999.1 950769 951515 R COG2826:Transposase and inactivatedderivatives, IS30 family; transposase for insertion sequence elementIS1086 complement(950769..951515) Bifidobacterium bifidum BGN4 13069769 YP_006394255.1 CDS mobA NC_017999.1 952531 953112 R putative mobilization protein complement(952531..953112) Bifidobacterium bifidum BGN4 13069770 YP_006394256.1 CDS mobA NC_017999.1 953119 953646 R putative mobilization protein complement(953119..953646) Bifidobacterium bifidum BGN4 13069771 YP_006394257.1 CDS BBB_0784 NC_017999.1 953640 953960 D COG2963:Transposase and inactivated derivatives; insertion element IS6110 953640..953960 Bifidobacterium bifidum BGN4 13069772 YP_006394258.1 CDS BBB_0785 NC_017999.1 953960 954892 D COG2801:Transposase and inactivated derivatives; putative transposase for insertion sequenceelement IS986/IS6110 953960..954892 Bifidobacterium bifidum BGN4 13069773 YP_006394259.1 CDS ecoRIM NC_017999.1 954966 955211 D modification methylase 954966..955211 Bifidobacterium bifidum BGN4 13069774 YP_006394260.1 CDS BBB_0787 NC_017999.1 955311 955451 D hypothetical protein 955311..955451 Bifidobacterium bifidum BGN4 13069775 YP_006394261.1 CDS BBB_0788 NC_017999.1 955724 955978 D hypothetical protein 955724..955978 Bifidobacterium bifidum BGN4 13069776 YP_006394262.1 CDS pncA NC_017999.1 956067 956681 R COG1335:Amidases related to nicotinamidase; pyrazinamidase/nicotinamidase complement(956067..956681) Bifidobacterium bifidum BGN4 13069777 YP_006394263.1 CDS BBB_0790 NC_017999.1 956789 957070 R hypothetical protein complement(956789..957070) Bifidobacterium bifidum BGN4 13069778 YP_006394264.1 CDS BBB_0792 NC_017999.1 958514 958729 D hypothetical protein 958514..958729 Bifidobacterium bifidum BGN4 13069780 YP_006394265.1 CDS uraA NC_017999.1 958826 960181 R COG2233:Xanthine/uracil permeases; xanthine/uracil permease complement(958826..960181) Bifidobacterium bifidum BGN4 13069781 YP_006394266.1 CDS xpt NC_017999.1 960221 960802 R COG0503:Adenine/guanine phosphoribosyl transferasesand related PRPP-binding proteins; xanthine phosphoribosyl transferase complement(960221..960802) Bifidobacterium bifidum BGN4 13069782 YP_006394267.1 CDS BBB_0795 NC_017999.1 960994 962997 D COG1835:Predicted acyl transferases; lipopolysaccharide modification acyl transferase 960994..962997 Bifidobacterium bifidum BGN4 13069783 YP_006394268.1 CDS pcrA NC_017999.1 963061 965718 D COG0210:Superfamily I DNA and RNA helicases; ATP-dependent DNA helicase 963061..965718 Bifidobacterium bifidum BGN4 13069784 YP_006394269.1 CDS BBB_0797 NC_017999.1 965894 966292 D hypothetical protein 965894..966292 Bifidobacterium bifidum BGN4 13069785 YP_006394270.1 CDS BBB_0798 NC_017999.1 966289 967503 D COG0577:ABC-type antimicrobial peptide transportsystem, permease component; ABC superfamily ATP binding cassette transportermembrane protein 966289..967503 Bifidobacterium bifidum BGN4 13069786 YP_006394271.1 CDS macB NC_017999.1 967510 968325 D COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; macrolide export ATP-binding/permease 967510..968325 Bifidobacterium bifidum BGN4 13069787 YP_006394272.1 CDS rpsD NC_017999.1 968529 969155 D COG0522:Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 968529..969155 Bifidobacterium bifidum BGN4 13069788 YP_006394273.1 CDS BBB_0801 NC_017999.1 969290 971125 R COG1835:Predicted acyl transferases; putative acyl transferase complement(969290..971125) Bifidobacterium bifidum BGN4 13069789 YP_006394274.1 CDS gpmA NC_017999.1 971842 972567 D COG0406:Fructose-2,6-bisphosphatase; 2, 3-bisphosphoglycerate-dependentphosphoglycerate mutase 971842..972567 Bifidobacterium bifidum BGN4 13069790 YP_006394275.1 CDS BBB_0803 NC_017999.1 972688 973098 D hypothetical protein 972688..973098 Bifidobacterium bifidum BGN4 13069791 YP_006394276.1 CDS BBB_0804 NC_017999.1 973098 973337 D hypothetical protein 973098..973337 Bifidobacterium bifidum BGN4 13069792 YP_006394277.1 CDS alaS NC_017999.1 973452 976130 D COG0013:Alanyl-tRNA synthetase; alanyl-tRNA synthetase 973452..976130 Bifidobacterium bifidum BGN4 13069793 YP_006394278.1 CDS BBB_0806 NC_017999.1 976139 976597 D COG0816:Predicted endonuclease involved inrecombination (possible Holliday junction resolvase inMycoplasma; putative Holliday junction resolvase 976139..976597 Bifidobacterium bifidum BGN4 13069794 YP_006394279.1 CDS BBB_0807 NC_017999.1 976609 977796 D COG1559:Predicted periplasmic solute-binding protein; aminodeoxychorismate lyase 976609..977796 Bifidobacterium bifidum BGN4 13069795 YP_006394280.1 CDS BBB_0808 NC_017999.1 977793 978188 R hypothetical protein complement(977793..978188) Bifidobacterium bifidum BGN4 13069796 YP_006394281.1 CDS aroC NC_017999.1 978310 979503 D COG0082:Chorismate synthase; chorismate synthase 978310..979503 Bifidobacterium bifidum BGN4 13069797 YP_006394282.1 CDS aroB NC_017999.1 979561 981183 D COG0337:3-dehydroquinate synthetase; 3-dehydroquinate synthase 979561..981183 Bifidobacterium bifidum BGN4 13069798 YP_006394283.1 CDS aroQ NC_017999.1 981273 981716 D COG0757:3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase 981273..981716 Bifidobacterium bifidum BGN4 13069799 YP_006394284.1 CDS BBB_0812 NC_017999.1 981802 982056 D hypothetical protein 981802..982056 Bifidobacterium bifidum BGN4 13069800 YP_006394285.1 CDS luxR NC_017999.1 982131 982853 R COG2197:Response regulator containing a CheY-likereceiver domain and an HTH DNA-binding domain; regulatory protein complement(982131..982853) Bifidobacterium bifidum BGN4 13069801 YP_006394286.1 CDS BBB_0814 NC_017999.1 983046 983774 R COG3764:Sortase (surface protein transpeptidase); putative fimbrial associated sortase complement(983046..983774) Bifidobacterium bifidum BGN4 13069802 YP_006394287.1 CDS pyrG NC_017999.1 983819 985486 D COG0504:CTP synthase (UTP-ammonia lyase); CTP synthase 983819..985486 Bifidobacterium bifidum BGN4 13069803 YP_006394288.1 CDS sufB NC_017999.1 985708 987207 D COG0719:ABC-type transport system involved in Fe-Scluster assembly, permease component; FeS assembly protein 985708..987207 Bifidobacterium bifidum BGN4 13069804 YP_006394289.1 CDS sufD NC_017999.1 987213 988442 D COG0719:ABC-type transport system involved in Fe-Scluster assembly, permease component; FeS assembly protein 987213..988442 Bifidobacterium bifidum BGN4 13069805 YP_006394290.1 CDS sufC NC_017999.1 988445 989233 D COG0396:ABC-type transport system involved in Fe-Scluster assembly, ATPase component; FeS assembly ATPase 988445..989233 Bifidobacterium bifidum BGN4 13069806 YP_006394291.1 CDS csd NC_017999.1 989455 990726 D COG0520:Selenocysteine lyase; putative cysteine desulfurase 989455..990726 Bifidobacterium bifidum BGN4 13069807 YP_006394292.1 CDS BBB_0820 NC_017999.1 990897 991430 D COG0822:NifU homolog involved in Fe-S clusterformation; SUF system FeS assembly protein, NifU family protein 990897..991430 Bifidobacterium bifidum BGN4 13069808 YP_006394293.1 CDS paaD NC_017999.1 991509 992093 D COG2151:Predicted metal-sulfur cluster biosyntheticenzyme; putative metal-sulfur cluster biosyntheticenzyme 991509..992093 Bifidobacterium bifidum BGN4 13069809 YP_006394294.1 CDS glgC NC_017999.1 992199 993446 R COG0448:ADP-glucose pyrophosphorylase; glucose-1-phosphate adenylyltransferase complement(992199..993446) Bifidobacterium bifidum BGN4 13069810 YP_006394295.1 CDS tnsR NC_017999.1 993612 994490 R COG0566:rRNA methylases; putative tRNA/rRNA methyl transferase complement(993612..994490) Bifidobacterium bifidum BGN4 13069811 YP_006394296.1 CDS BBB_0824 NC_017999.1 994801 995598 D COG1385:Uncharacterized protein conserved inbacteria; putative Ser-Asp rich fibrinogen/bonesialo protein binding protein 994801..995598 Bifidobacterium bifidum BGN4 13069813 YP_006394297.1 CDS BBB_0825 NC_017999.1 995672 996010 D COG0537:Diadenosine tetraphosphate (Ap4A) hydrolaseand other HIT family hydrolases; putative HIT family hydrolase 995672..996010 Bifidobacterium bifidum BGN4 13069814 YP_006394298.1 CDS phoH NC_017999.1 996019 997104 D COG1702:Phosphate starvation-inducible proteinPhoH, predicted ATPase; phosphate starvation-induced protein 996019..997104 Bifidobacterium bifidum BGN4 13069815 YP_006394299.1 CDS BBB_0827 NC_017999.1 997101 997646 D COG0319:Predicted metal-dependent hydrolase; putative metalloprotease 997101..997646 Bifidobacterium bifidum BGN4 13069816 YP_006394300.1 CDS BBB_0828 NC_017999.1 997723 999141 D COG1253:Hemolysins and related proteins containingCBS domains; hemolysin-like protein 997723..999141 Bifidobacterium bifidum BGN4 13069817 YP_006394301.1 CDS era NC_017999.1 999189 1000199 D COG1159:GTPase; GTP-binding protein 999189..1000199 Bifidobacterium bifidum BGN4 13069818 YP_006394302.1 CDS fadD NC_017999.1 1000300 1002336 R COG1022:Long-chain acyl-CoA synthetases(AMP-forming); long-chain-fatty-acid--CoA ligase complement(1000300..1002336) Bifidobacterium bifidum BGN4 13069819 YP_006394303.1 CDS pntAA NC_017999.1 1002556 1003695 D COG3288:NAD/NADP transhydrogenase alpha subunit; NAD(P) transhydrogenase subunit alpha part 1 1002556..1003695 Bifidobacterium bifidum BGN4 13069820 YP_006394304.1 CDS pntAB NC_017999.1 1003699 1004013 D COG3288:NAD/NADP transhydrogenase alpha subunit; NAD(P) transhydrogenase subunit alpha part 2 1003699..1004013 Bifidobacterium bifidum BGN4 13069821 YP_006394305.1 CDS pntB NC_017999.1 1004013 1005458 D COG1282:NAD/NADP transhydrogenase beta subunit; NAD(P) transhydrogenase subunit beta 1004013..1005458 Bifidobacterium bifidum BGN4 13069822 YP_006394306.1 CDS yqkD NC_017999.1 1005598 1006665 R COG1073:Hydrolases of the alpha/beta superfamily; YgkD complement(1005598..1006665) Bifidobacterium bifidum BGN4 13069823 YP_006394307.1 CDS BBB_0835 NC_017999.1 1006906 1007541 D COG1825:Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25 1006906..1007541 Bifidobacterium bifidum BGN4 13069824 YP_006394308.1 CDS ilvE NC_017999.1 1007757 1008884 D COG0115:Branched-chain amino acidamino transferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid amino transferase 1007757..1008884 Bifidobacterium bifidum BGN4 13069825 YP_006394309.1 CDS BBB_0837 NC_017999.1 1008965 1009477 D putative phosphoesterase or phosphohydrolase 1008965..1009477 Bifidobacterium bifidum BGN4 13069826 YP_006394310.1 CDS BBB_0838 NC_017999.1 1009745 1009996 D hypothetical protein 1009745..1009996 Bifidobacterium bifidum BGN4 13069827 YP_006394311.1 CDS BBB_0839 NC_017999.1 1010056 1010814 D COG2860:Predicted membrane protein; hypothetical protein 1010056..1010814 Bifidobacterium bifidum BGN4 13069828 YP_006394312.1 CDS rpsT NC_017999.1 1010983 1011243 R COG0268:Ribosomal protein S20; 30S ribosomal protein S20 complement(1010983..1011243) Bifidobacterium bifidum BGN4 13069829 YP_006394313.1 CDS lepA NC_017999.1 1011452 1013332 D COG0481:Membrane GTPase LepA; GTP-binding protein 1011452..1013332 Bifidobacterium bifidum BGN4 13069830 YP_006394314.1 CDS hemN NC_017999.1 1013347 1014741 D COG0635:Coproporphyrinogen III oxidase and relatedFe-S oxidoreductases; putative oxygen-independent coproporphyrinogenIII oxidase 1013347..1014741 Bifidobacterium bifidum BGN4 13069831 YP_006394315.1 CDS BBB_0843 NC_017999.1 1014798 1014938 R COG2364:Predicted membrane protein; hypothetical protein complement(1014798..1014938) Bifidobacterium bifidum BGN4 13069832 YP_006394316.1 CDS BBB_0844 NC_017999.1 1015289 1016839 D COG0436:Aspartate/tyrosine/aromaticamino transferase; putative amino transferase 1015289..1016839 Bifidobacterium bifidum BGN4 13069833 YP_006394317.1 CDS BBB_0845 NC_017999.1 1017035 1019125 D COG0480:Translation elongation factors (GTPases); small GTP-binding protein 1017035..1019125 Bifidobacterium bifidum BGN4 13069834 YP_006394318.1 CDS gltB NC_017999.1 1019405 1023976 D COG0069:Glutamate synthase domain 2; ferredoxin-dependent glutamate synthase 1019405..1023976 Bifidobacterium bifidum BGN4 13069835 YP_006394319.1 CDS gltD NC_017999.1 1023978 1025510 D COG0493:NADPH-dependent glutamate synthase betachain and related oxidoreductases; glutamate synthase 1023978..1025510 Bifidobacterium bifidum BGN4 13069836 YP_006394320.1 CDS BBB_0848 NC_017999.1 1025855 1026328 D hypothetical protein 1025855..1026328 Bifidobacterium bifidum BGN4 13069837 YP_006394321.1 CDS glgA NC_017999.1 1026477 1027727 D COG0438:Glycosyl transferase; putative glycosyl transferase 1026477..1027727 Bifidobacterium bifidum BGN4 13069838 YP_006394322.1 CDS ymeB NC_017999.1 1027879 1028745 D COG1119:ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; ABC transporter ATP-binding protein 1027879..1028745 Bifidobacterium bifidum BGN4 13069839 YP_006394323.1 CDS ybeM NC_017999.1 1028834 1029706 D COG0388:Predicted amidohydrolase; hydrolase 1028834..1029706 Bifidobacterium bifidum BGN4 13069840 YP_006394324.1 CDS BBB_0852 NC_017999.1 1029804 1030256 D hypothetical protein 1029804..1030256 Bifidobacterium bifidum BGN4 13069841 YP_006394325.1 CDS BBB_0853 NC_017999.1 1030322 1030441 D hypothetical protein 1030322..1030441 Bifidobacterium bifidum BGN4 13069842 YP_006394326.1 CDS cbh NC_017999.1 1030575 1031525 D COG3049:Penicillin V acylase and related amidases; choloylglycine hydrolase 1030575..1031525 Bifidobacterium bifidum BGN4 13069843 YP_006394327.1 CDS BBB_0855 NC_017999.1 1031876 1032799 D COG2826:Transposase and inactivatedderivatives, IS30 family; transposase for insertion sequence elementIS4351 1031876..1032799 Bifidobacterium bifidum BGN4 13069844 YP_006394328.1 CDS BBB_0856 NC_017999.1 1032966 1035974 D COG0553:Superfamily II DNA/RNA helicases, SNF2family; SNF2- related helicase 1032966..1035974 Bifidobacterium bifidum BGN4 13069845 YP_006394329.1 CDS BBB_0857 NC_017999.1 1035986 1040845 D COG1002:Type II restriction enzyme, methylase subunits; putative adenine-specific methylase 1035986..1040845 Bifidobacterium bifidum BGN4 13069846 YP_006394330.1 CDS BBB_0859 NC_017999.1 1047391 1049874 D COG0210:Superfamily I DNA and RNA helicases; UvrD/REP helicase 1047391..1049874 Bifidobacterium bifidum BGN4 13069848 YP_006394331.1 CDS BBB_0860 NC_017999.1 1049906 1051405 D putative EA59 gene protein 1049906..1051405 Bifidobacterium bifidum BGN4 13069849 YP_006394332.1 CDS BBB_0861 NC_017999.1 1051402 1052634 D putative EA31 gene protein, phage lambda 1051402..1052634 Bifidobacterium bifidum BGN4 13069850 YP_006394333.1 CDS BBB_0862 NC_017999.1 1052707 1055181 D COG1479:Uncharacterized conserved protein; hypothetical protein 1052707..1055181 Bifidobacterium bifidum BGN4 13069851 YP_006394334.1 CDS BBB_0863 NC_017999.1 1055247 1055444 D putative phage-ralated protein 1055247..1055444 Bifidobacterium bifidum BGN4 13069852 YP_006394335.1 CDS rarD NC_017999.1 1055707 1056225 R COG2962:Predicted permeases; chloramphenicol-sensitive protein complement(1055707..1056225) Bifidobacterium bifidum BGN4 13069853 YP_006394336.1 CDS BBB_0865 NC_017999.1 1056286 1056477 R COG2962:Predicted permeases; putative permease complement(1056286..1056477) Bifidobacterium bifidum BGN4 13069854 YP_006394337.1 CDS BBB_0866 NC_017999.1 1056628 1057548 R COG0657:Esterase/lipase; alpha/beta hydrolase complement(1056628..1057548) Bifidobacterium bifidum BGN4 13069855 YP_006394338.1 CDS trmI NC_017999.1 1057789 1058889 D COG2519:tRNA(1-methyladenosine) methyl transferaseand related methyl transferases; tRNA (adenine-N(1)-)-methyl transferase 1057789..1058889 Bifidobacterium bifidum BGN4 13069856 YP_006394339.1 CDS BBB_0868 NC_017999.1 1059009 1059566 D COG2062:Phosphohistidine phosphatase SixA; hypothetical protein 1059009..1059566 Bifidobacterium bifidum BGN4 13069857 YP_006394340.1 CDS metE NC_017999.1 1059726 1062032 D COG0620:Methionine synthase II(cobalamin-independent); 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyl transferase 1059726..1062032 Bifidobacterium bifidum BGN4 13069858 YP_006394341.1 CDS metF NC_017999.1 1062175 1063023 D COG0685:5, 10-methylenetetrahydrofolate reductase; 5, 10-methylenetetrahydrofolate reductase 1062175..1063023 Bifidobacterium bifidum BGN4 13069859 YP_006394342.1 CDS BBB_0871 NC_017999.1 1063140 1063472 R hypothetical protein complement(1063140..1063472) Bifidobacterium bifidum BGN4 13069860 YP_006394343.1 CDS glnE NC_017999.1 1063554 1066652 D COG1391:Glutamine synthetase adenylyl transferase; glutamate-ammonia-ligase adenylyl transferase 1063554..1066652 Bifidobacterium bifidum BGN4 13069861 YP_006394344.1 CDS pyrB NC_017999.1 1066793 1067755 D COG0540:Aspartate carbamoyl transferase, catalyticchain; aspartate carbamoyl transferase 1066793..1067755 Bifidobacterium bifidum BGN4 13069862 YP_006394345.1 CDS pyrI NC_017999.1 1067755 1068174 D COG1781:Aspartate carbamoyl transferase, regulatory subunit; aspartate carbamoyl transferase regulatory subunit 1067755..1068174 Bifidobacterium bifidum BGN4 13069863 YP_006394346.1 CDS pyrC NC_017999.1 1068283 1069707 D COG0044:Dihydroorotase and related cyclicamidohydrolases; dihydroorotase 1068283..1069707 Bifidobacterium bifidum BGN4 13069864 YP_006394347.1 CDS pyrF NC_017999.1 1069778 1070743 D COG0284:Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 1069778..1070743 Bifidobacterium bifidum BGN4 13069865 YP_006394348.1 CDS pyrK NC_017999.1 1070876 1071706 D COG0543:2-polyprenylphenol hydroxylase and relatedflavodoxin oxidoreductases; dihydroorotate dehydrogenase electron transfer subunit 1070876..1071706 Bifidobacterium bifidum BGN4 13069866 YP_006394349.1 CDS pyrD NC_017999.1 1071709 1072656 D COG0167:Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 1071709..1072656 Bifidobacterium bifidum BGN4 13069867 YP_006394350.1 CDS pyrE NC_017999.1 1072678 1073376 D COG0461:Orotate phosphoribosyl transferase; orotate phosphoribosyl transferase 1072678..1073376 Bifidobacterium bifidum BGN4 13069868 YP_006394351.1 CDS hmrR NC_017999.1 1073527 1073670 D HTH-type transcriptional regulator 1073527..1073670 Bifidobacterium bifidum BGN4 13069869 YP_006394352.1 CDS adh NC_017999.1 1073740 1074783 D COG1063:Threonine dehydrogenase and relatedZn-dependent dehydrogenases; alcohol dehydrogenase 1073740..1074783 Bifidobacterium bifidum BGN4 13069870 YP_006394353.1 CDS BBB_0882 NC_017999.1 1074973 1076175 R hypothetical protein complement(1074973..1076175) Bifidobacterium bifidum BGN4 13069871 YP_006394354.1 CDS secA NC_017999.1 1076394 1076624 D pre protein translocase subunit (ATPase, RNAhelicase) 1076394..1076624 Bifidobacterium bifidum BGN4 13069872 YP_006394355.1 CDS BBB_0884 NC_017999.1 1076817 1077149 D serine/threonine protein kinase 1076817..1077149 Bifidobacterium bifidum BGN4 13069873 YP_006394356.1 CDS uvrA NC_017999.1 1077450 1079957 D COG0178:Excinuclease ATPase subunit; putative excinuclease ABC subunit A 1077450..1079957 Bifidobacterium bifidum BGN4 13069874 YP_006394357.1 CDS mepA NC_017999.1 1080031 1081389 D COG0534:Na+-driven multidrug efflux pump; multidrug export protein 1080031..1081389 Bifidobacterium bifidum BGN4 13069875 YP_006394358.1 CDS BBB_0887 NC_017999.1 1081372 1081485 R hypothetical protein complement(1081372..1081485) Bifidobacterium bifidum BGN4 13069876 YP_006394359.1 CDS fabG NC_017999.1 1081542 1082252 D COG1028:Dehydrogenases with different specificities( related to short-chain alcohol dehydrogenases); 3-oxoacyl-[acyl-carrier- protein] reductase 1081542..1082252 Bifidobacterium bifidum BGN4 13069877 YP_006394360.1 CDS BBB_0889 NC_017999.1 1082255 1082971 D COG2231:Uncharacterized protein related toEndonuclease III; putative endonuclease 1082255..1082971 Bifidobacterium bifidum BGN4 13069878 YP_006394361.1 CDS BBB_0890 NC_017999.1 1083066 1083542 D COG1695:Predicted transcriptional regulators; putative PadR-like family transcriptionalregulator 1083066..1083542 Bifidobacterium bifidum BGN4 13069879 YP_006394362.1 CDS BBB_0891 NC_017999.1 1083549 1084544 D COG0679:Predicted permeases; putative integral membrane permease protein 1083549..1084544 Bifidobacterium bifidum BGN4 13069880 YP_006394363.1 CDS BBB_0892 NC_017999.1 1084570 1085109 R COG1917:Uncharacterized conserved protein, containsdouble-stranded beta-helix domain; putative outer membrane protein complement(1084570..1085109) Bifidobacterium bifidum BGN4 13069881 YP_006394364.1 CDS hipA NC_017999.1 1085043 1086188 R transcriptional regulator complement(1085043..1086188) Bifidobacterium bifidum BGN4 13069882 YP_006394365.1 CDS BBB_0894 NC_017999.1 1086185 1086445 R COG1396:Predicted transcriptional regulators; transcriptional regulator complement(1086185..1086445) Bifidobacterium bifidum BGN4 13069883 YP_006394366.1 CDS tam NC_017999.1 1086506 1086793 D COG4106:Trans-aconitate methyl transferase; trans-aconitate 2-methyl transferase 1086506..1086793 Bifidobacterium bifidum BGN4 13069884 YP_006394367.1 CDS BBB_0896 NC_017999.1 1086790 1086987 D hypothetical protein 1086790..1086987 Bifidobacterium bifidum BGN4 13069885 YP_006394368.1 CDS ybjK NC_017999.1 1087088 1087663 D COG3226:Uncharacterized protein conserved inbacteria; putative HTH-type transcriptional regulator 1087088..1087663 Bifidobacterium bifidum BGN4 13068766 YP_006394369.1 CDS BBB_0898 NC_017999.1 1087800 1088300 D hypothetical protein 1087800..1088300 Bifidobacterium bifidum BGN4 13068767 YP_006394370.1 CDS fhuR NC_017999.1 1088354 1089277 R COG0583:Transcriptional regulator; lysR-type transcriptional regulator complement(1088354..1089277) Bifidobacterium bifidum BGN4 13068768 YP_006394371.1 CDS BBB_0900 NC_017999.1 1089494 1090123 R COG1011:Predicted hydrolase (HAD superfamily); putative alpha beta hydrolase complement(1089494..1090123) Bifidobacterium bifidum BGN4 13068769 YP_006394372.1 CDS BBB_0901 NC_017999.1 1090283 1092076 R COG0063:Predicted sugar kinase; carbohydrate kinase complement(1090283..1092076) Bifidobacterium bifidum BGN4 13068770 YP_006394373.1 CDS BBB_0902 NC_017999.1 1092379 1093140 D COG0599:Uncharacterized homolog ofgamma-carboxymuconolactone decarboxylase subunit; carboxymuconolactone decarboxylase 1092379..1093140 Bifidobacterium bifidum BGN4 13068771 YP_006394374.1 CDS dkgB NC_017999.1 1093157 1093771 R COG0656:Aldo/keto reductases, related todiketogulonate reductase; 2,5-diketo-D-gluconic acid reductase B complement(1093157..1093771) Bifidobacterium bifidum BGN4 13068772 YP_006394375.1 CDS BBB_0904 NC_017999.1 1094503 1095969 D COG4284:UDP-glucose pyrophosphorylase; putative UTP--glucose-1-phosphateuridylyl transferase 1094503..1095969 Bifidobacterium bifidum BGN4 13068774 YP_006394376.1 CDS BBB_0905 NC_017999.1 1096107 1098044 D transcriptional regulator 1096107..1098044 Bifidobacterium bifidum BGN4 13068775 YP_006394377.1 CDS BBB_0906 NC_017999.1 1098049 1098375 D hypothetical protein 1098049..1098375 Bifidobacterium bifidum BGN4 13068776 YP_006394378.1 CDS helY NC_017999.1 1098484 1101111 D COG4581:Superfamily II RNA helicase; putative helicase 1098484..1101111 Bifidobacterium bifidum BGN4 13068777 YP_006394379.1 CDS BBB_0908 NC_017999.1 1101166 1101513 D hypothetical protein 1101166..1101513 Bifidobacterium bifidum BGN4 13068778 YP_006394380.1 CDS BBB_0909 NC_017999.1 1101524 1102258 D COG0546:Predicted phosphatases; putative hydrolase or phosphatase 1101524..1102258 Bifidobacterium bifidum BGN4 13068779 YP_006394381.1 CDS BBB_0910 NC_017999.1 1102417 1103010 R hypothetical protein complement(1102417..1103010) Bifidobacterium bifidum BGN4 13068780 YP_006394382.1 CDS BBB_0911 NC_017999.1 1103132 1103368 D hypothetical protein 1103132..1103368 Bifidobacterium bifidum BGN4 13068781 YP_006394383.1 CDS BBB_0912 NC_017999.1 1103517 1104002 D hypothetical protein 1103517..1104002 Bifidobacterium bifidum BGN4 13068782 YP_006394384.1 CDS BBB_0913 NC_017999.1 1104006 1104656 D COG4832:Uncharacterized conserved protein; hypothetical protein 1104006..1104656 Bifidobacterium bifidum BGN4 13068783 YP_006394385.1 CDS BBB_0914 NC_017999.1 1105111 1105494 R hypothetical protein complement(1105111..1105494) Bifidobacterium bifidum BGN4 13068784 YP_006394386.1 CDS BBB_0915 NC_017999.1 1105615 1105992 R COG1294:Cytochrome bd-type quinol oxidase, subunit2; anaerobic C4-dicarboxylate transport protein complement(1105615..1105992) Bifidobacterium bifidum BGN4 13068785 YP_006394387.1 CDS BBB_0916 NC_017999.1 1106007 1106657 R COG0789:Predicted transcriptional regulators; putative HTH-type transcriptional regulator complement(1106007..1106657) Bifidobacterium bifidum BGN4 13068786 YP_006394388.1 CDS garA NC_017999.1 1106776 1107213 R COG1716:FOG: FHA domain; putative signal transduction protein complement(1106776..1107213) Bifidobacterium bifidum BGN4 13068787 YP_006394389.1 CDS BBB_0918 NC_017999.1 1107219 1108040 R COG3879:Uncharacterized protein conserved inbacteria; hypothetical protein complement(1107219..1108040) Bifidobacterium bifidum BGN4 13068788 YP_006394390.1 CDS BBB_0919 NC_017999.1 1108047 1108379 R COG3856:Uncharacterized conserved protein (smallbasic protein); hypothetical protein complement(1108047..1108379) Bifidobacterium bifidum BGN4 13068789 YP_006394391.1 CDS BBB_0920 NC_017999.1 1108380 1109351 R COG3879:Uncharacterized protein conserved inbacteria; hypothetical protein complement(1108380..1109351) Bifidobacterium bifidum BGN4 13068790 YP_006394392.1 CDS pgsA NC_017999.1 1109341 1109994 R COG0558:Phosphatidylglycerophosphate synthase; putativeCDP-diacylglycerol--glycerol-3- phosphate3-phosphatidyl- transferase complement(1109341..1109994) Bifidobacterium bifidum BGN4 13068791 YP_006394393.1 CDS hisG NC_017999.1 1110011 1110862 R COG0040:ATP phosphoribosyl transferase; ATP phosphoribosyl transferase complement(1110011..1110862) Bifidobacterium bifidum BGN4 13068792 YP_006394394.1 CDS hisE NC_017999.1 1110897 1111160 R COG0140:Phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase complement(1110897..1111160) Bifidobacterium bifidum BGN4 13068793 YP_006394395.1 CDS rpe NC_017999.1 1111272 1111937 R COG0036:Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase complement(1111272..1111937) Bifidobacterium bifidum BGN4 13068794 YP_006394396.1 CDS lgt NC_017999.1 1112065 1113057 R COG0682:Prolipo protein diacylglyceryl transferase; prolipo protein diacylglyceryl transferase complement(1112065..1113057) Bifidobacterium bifidum BGN4 13068795 YP_006394397.1 CDS trpA NC_017999.1 1113155 1114027 R COG0159:Tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(1113155..1114027) Bifidobacterium bifidum BGN4 13068796 YP_006394398.1 CDS trpB NC_017999.1 1114060 1116147 R COG0133:Tryptophan synthase beta chain; tryptophan synthase subunit beta complement(1114060..1116147) Bifidobacterium bifidum BGN4 13068797 YP_006394399.1 CDS engA NC_017999.1 1116346 1118379 R COG1160:Predicted GTPases; GTP-binding protein complement(1116346..1118379) Bifidobacterium bifidum BGN4 13068798 YP_006394400.1 CDS rsuA NC_017999.1 1118478 1119254 R COG1187:16S rRNA uridine-516 pseudouridylatesynthase and related pseudouridylate synthases; RNA pseudouridine synthase complement(1118478..1119254) Bifidobacterium bifidum BGN4 13068799 YP_006394401.1 CDS BBB_0930 NC_017999.1 1119421 1120323 D COG0580:Glycerol uptake facilitator and relatedpermeases (Major Intrinsic protein Family); putative membrane channel 1119421..1120323 Bifidobacterium bifidum BGN4 13068800 YP_006394402.1 CDS BBB_0931 NC_017999.1 1120303 1120596 R hypothetical protein complement(1120303..1120596) Bifidobacterium bifidum BGN4 13068801 YP_006394403.1 CDS purH NC_017999.1 1120689 1122320 R COG0138:AICAR transformylase/IMP cyclohydrolasePurH (only IMP cyclohydrolase domain in Aful); bifunctional purine biosynthesis protein complement(1120689..1122320) Bifidobacterium bifidum BGN4 13068802 YP_006394404.1 CDS BBB_0933 NC_017999.1 1122268 1123629 R hypothetical protein complement(1122268..1123629) Bifidobacterium bifidum BGN4 13068803 YP_006394405.1 CDS sucD NC_017999.1 1123626 1124552 R COG0074:Succinyl-CoA synthetase, alpha subunit; succinyl-CoA ligase [ADP-forming] subunit alpha complement(1123626..1124552) Bifidobacterium bifidum BGN4 13068804 YP_006394406.1 CDS sucC NC_017999.1 1124549 1125754 R COG0045:Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta complement(1124549..1125754) Bifidobacterium bifidum BGN4 13068805 YP_006394407.1 CDS apt NC_017999.1 1125839 1126420 R COG0503:Adenine/guanine phosphoribosyl transferasesand related PRPP-binding proteins; adenine phosphoribosyl transferase complement(1125839..1126420) Bifidobacterium bifidum BGN4 13068806 YP_006394408.1 CDS yajC NC_017999.1 1126438 1126863 R pre protein translocase, YajC subunit complement(1126438..1126863) Bifidobacterium bifidum BGN4 13068807 YP_006394409.1 CDS ruvB NC_017999.1 1126924 1128009 R COG2255:Holliday junction resolvasome, helicase subunit; holliday junction DNA helicase complement(1126924..1128009) Bifidobacterium bifidum BGN4 13068808 YP_006394410.1 CDS ruvA NC_017999.1 1128016 1128633 R COG0632:Holliday junction resolvasome, DNA-binding subunit; holliday junction DNA helicase complement(1128016..1128633) Bifidobacterium bifidum BGN4 13068809 YP_006394411.1 CDS BBB_0940 NC_017999.1 1128633 1128794 R hypothetical protein complement(1128633..1128794) Bifidobacterium bifidum BGN4 13068810 YP_006394412.1 CDS ruvC NC_017999.1 1128809 1129390 R COG0817:Holliday junction resolvasome, endonuclease subunit; crossover junction endodeoxyribonuclease complement(1128809..1129390) Bifidobacterium bifidum BGN4 13068811 YP_006394413.1 CDS BBB_0942 NC_017999.1 1129397 1130155 R COG0217:Uncharacterized conserved protein; hypothetical protein complement(1129397..1130155) Bifidobacterium bifidum BGN4 13068812 YP_006394414.1 CDS hex20 NC_017999.1 1130434 1133616 R COG3525:N-acetyl-beta-hexosaminidase; beta-N-acetylhexosaminidase complement(1130434..1133616) Bifidobacterium bifidum BGN4 13068813 YP_006394415.1 CDS thrS NC_017999.1 1133857 1135887 R COG0441:Threonyl-tRNA synthetase; threonyl-tRNA synthetase complement(1133857..1135887) Bifidobacterium bifidum BGN4 13068814 YP_006394416.1 CDS BBB_0945 NC_017999.1 1136099 1137694 R COG1301:Na+/H+-dicarboxylate symporters; sodium:dicarboxylate symporter protein complement(1136099..1137694) Bifidobacterium bifidum BGN4 13068815 YP_006394417.1 CDS BBB_0946 NC_017999.1 1138247 1139887 D hypothetical protein 1138247..1139887 Bifidobacterium bifidum BGN4 13068818 YP_006394418.1 CDS BBB_0947 NC_017999.1 1140673 1141533 D hypothetical protein 1140673..1141533 Bifidobacterium bifidum BGN4 13068822 YP_006394419.1 CDS uppP NC_017999.1 1141655 1142599 R COG1968:Uncharacterized bacitracin resistance protein; undecaprenyl-diphosphatase complement(1141655..1142599) Bifidobacterium bifidum BGN4 13068823 YP_006394420.1 CDS BBB_0949 NC_017999.1 1142738 1143529 D COG3001:Fructosamine-3-kinase; fructosamine-3-kinase 1142738..1143529 Bifidobacterium bifidum BGN4 13068824 YP_006394421.1 CDS dnaJ NC_017999.1 1143665 1144816 R COG0484:DnaJ-class molecular chaperone withC-terminal Zn finger domain; chaperone protein complement(1143665..1144816) Bifidobacterium bifidum BGN4 13068825 YP_006394422.1 CDS hrcA NC_017999.1 1144869 1146125 R COG1420:Transcriptional regulator of heat shockgene; heat-inducible transcription repressor complement(1144869..1146125) Bifidobacterium bifidum BGN4 13068826 YP_006394423.1 CDS tkt NC_017999.1 1146472 1148580 D COG0021:Transketolase; transketolase 1146472..1148580 Bifidobacterium bifidum BGN4 13068827 YP_006394424.1 CDS tal NC_017999.1 1148713 1149816 D COG0176:Transaldolase; transaldolase 1148713..1149816 Bifidobacterium bifidum BGN4 13068828 YP_006394425.1 CDS BBB_0954 NC_017999.1 1150059 1150871 D COG3619:Predicted membrane protein; hypothetical protein 1150059..1150871 Bifidobacterium bifidum BGN4 13068829 YP_006394426.1 CDS brnQ NC_017999.1 1151081 1152493 D COG1114:Branched-chain amino acid permeases; branched-chain amino acid transport system IIcarrier protein 1151081..1152493 Bifidobacterium bifidum BGN4 13068830 YP_006394427.1 CDS BBB_0956 NC_017999.1 1152762 1152968 R hypothetical protein complement(1152762..1152968) Bifidobacterium bifidum BGN4 13068831 YP_006394428.1 CDS BBB_0957 NC_017999.1 1153062 1153175 D hypothetical protein 1153062..1153175 Bifidobacterium bifidum BGN4 13068832 YP_006394429.1 CDS mepA NC_017999.1 1153363 1154757 R COG0534:Na+-driven multidrug efflux pump; multidrug export protein complement(1153363..1154757) Bifidobacterium bifidum BGN4 13068833 YP_006394430.1 CDS BBB_0959 NC_017999.1 1154730 1155566 R COG0561:Predicted hydrolases of the HADsuperfamily; putative hydrolase complement(1154730..1155566) Bifidobacterium bifidum BGN4 13068834 YP_006394431.1 CDS BBB_0960 NC_017999.1 1155620 1156570 R COG0039:Malate/lactate dehydrogenases; L-lactate dehydrogenase complement(1155620..1156570) Bifidobacterium bifidum BGN4 13068835 YP_006394432.1 CDS secG NC_017999.1 1156678 1156926 R pre protein translocase, SecG subunit complement(1156678..1156926) Bifidobacterium bifidum BGN4 13068836 YP_006394433.1 CDS tpiA NC_017999.1 1157005 1157799 R COG0149:Triosephosphate isomerase; triose-phosphate isomerase complement(1157005..1157799) Bifidobacterium bifidum BGN4 13068837 YP_006394434.1 CDS pgk NC_017999.1 1157868 1159073 R COG0126:3-phosphoglycerate kinase; phosphoglycerate kinase complement(1157868..1159073) Bifidobacterium bifidum BGN4 13068838 YP_006394435.1 CDS whiA NC_017999.1 1159231 1160202 R COG1481:Uncharacterized protein conserved inbacteria; transcriptional regulator complement(1159231..1160202) Bifidobacterium bifidum BGN4 13068839 YP_006394436.1 CDS BBB_0965 NC_017999.1 1160369 1161313 R COG1660:Predicted P-loop-containing kinase; hypothetical protein complement(1160369..1161313) Bifidobacterium bifidum BGN4 13068840 YP_006394437.1 CDS aroE NC_017999.1 1161313 1162275 R COG0169:Shikimate 5-dehydrogenase; shikimate dehydrogenase complement(1161313..1162275) Bifidobacterium bifidum BGN4 13068841 YP_006394438.1 CDS uvrC NC_017999.1 1162469 1164811 R COG0322:Nuclease subunit of the excinucleasecomplex; excinuclease ABC subunit C complement(1162469..1164811) Bifidobacterium bifidum BGN4 13068842 YP_006394439.1 CDS uvrA NC_017999.1 1164808 1167798 R COG0178:Excinuclease ATPase subunit; excinuclease ABC subunit A complement(1164808..1167798) Bifidobacterium bifidum BGN4 13068843 YP_006394440.1 CDS BBB_0969 NC_017999.1 1168045 1168695 R hypothetical protein complement(1168045..1168695) Bifidobacterium bifidum BGN4 13068844 YP_006394441.1 CDS macB NC_017999.1 1168749 1169138 R COG0577:ABC-type antimicrobial peptide transportsystem, permease component; macrolide export ATP-binding/permease complement(1168749..1169138) Bifidobacterium bifidum BGN4 13068845 YP_006394442.1 CDS BBB_0971 NC_017999.1 1169161 1169289 R hypothetical protein complement(1169161..1169289) Bifidobacterium bifidum BGN4 13068846 YP_006394443.1 CDS cutR NC_017999.1 1169594 1170259 D COG0745:Response regulators consisting of aCheY-like receiver domain and a winged-helix DNA-bindingdomain; transcriptional regulator 1169594..1170259 Bifidobacterium bifidum BGN4 13068847 YP_006394444.1 CDS cutS NC_017999.1 1170781 1171695 D COG0642:Signal transduction histidine kinase; sensor protein 1170781..1171695 Bifidobacterium bifidum BGN4 13068848 YP_006394445.1 CDS vanYB NC_017999.1 1171724 1172473 R COG1876:D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase complement(1171724..1172473) Bifidobacterium bifidum BGN4 13068849 YP_006394446.1 CDS ydiF NC_017999.1 1172705 1174306 D COG0488:ATPase components of ABC transporters withduplicated ATPase domains; ABC transporter ATP-binding protein 1172705..1174306 Bifidobacterium bifidum BGN4 13068850 YP_006394447.1 CDS galE NC_017999.1 1174717 1175739 R COG1087:UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1174717..1175739) Bifidobacterium bifidum BGN4 13068851 YP_006394448.1 CDS galT NC_017999.1 1175785 1177299 R COG4468:Galactose-1-phosphate uridyl transferase; galactose-1-phosphate uridylyl transferase complement(1175785..1177299) Bifidobacterium bifidum BGN4 13068852 YP_006394449.1 CDS BBB_0978 NC_017999.1 1177299 1178387 R N-acetylhexosamine kinase complement(1177299..1178387) Bifidobacterium bifidum BGN4 13068853 YP_006394450.1 CDS xylR NC_017999.1 1178677 1179831 D COG1940:Transcriptional regulator/sugar kinase; xylose repressor 1178677..1179831 Bifidobacterium bifidum BGN4 13068854 YP_006394451.1 CDS BBB_0980 NC_017999.1 1179974 1180915 R COG1940:Transcriptional regulator/sugar kinase; putative sugar kinase complement(1179974..1180915) Bifidobacterium bifidum BGN4 13068855 YP_006394452.1 CDS BBB_0981 NC_017999.1 1181143 1183398 R lacto-N-biose phosphorylase complement(1181143..1183398) Bifidobacterium bifidum BGN4 13068856 YP_006394453.1 CDS BBB_0982 NC_017999.1 1183397 1183546 D hypothetical protein 1183397..1183546 Bifidobacterium bifidum BGN4 13068857 YP_006394454.1 CDS araQ NC_017999.1 1183650 1184600 R COG0395:ABC-type sugar transport system, permease component; L-arabinose transport system permease complement(1183650..1184600) Bifidobacterium bifidum BGN4 13068858 YP_006394455.1 CDS yurN NC_017999.1 1184600 1185571 R COG1175:ABC-type sugar transport systems, permease components; ABC transporter permease complement(1184600..1185571) Bifidobacterium bifidum BGN4 13068859 YP_006394456.1 CDS yurO NC_017999.1 1185748 1187055 R COG1653:ABC-type sugar transport system, periplasmic component; putative ABC transporter extracellular-binding protein complement(1185748..1187055) Bifidobacterium bifidum BGN4 13068860 YP_006394457.1 CDS BBB_0986 NC_017999.1 1187243 1187395 R hypothetical protein complement(1187243..1187395) Bifidobacterium bifidum BGN4 13068861 YP_006394458.1 CDS trpE NC_017999.1 1187548 1189161 R COG0147:Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I complement(1187548..1189161) Bifidobacterium bifidum BGN4 13068862 YP_006394459.1 CDS hisI NC_017999.1 1189161 1189577 R COG0139:Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(1189161..1189577) Bifidobacterium bifidum BGN4 13068863 YP_006394460.1 CDS hisF NC_017999.1 1189659 1190432 R COG0107:Imidazoleglycerol-phosphate synthase; imidazole glycerol phosphate synthase subunit complement(1189659..1190432) Bifidobacterium bifidum BGN4 13068864 YP_006394461.1 CDS BBB_0990 NC_017999.1 1190582 1191772 R COG0820:Predicted Fe-S-cluster redox enzyme; radical SAM protein complement(1190582..1191772) Bifidobacterium bifidum BGN4 13068865 YP_006394462.1 CDS cdsA NC_017999.1 1191843 1192829 R COG0575:CDP-diglyceride synthetase; phosphatidate cytidylyltransferase complement(1191843..1192829) Bifidobacterium bifidum BGN4 13068866 YP_006394463.1 CDS frr NC_017999.1 1192946 1193500 R COG0233:Ribosome recycling factor; ribosome recycling factor complement(1192946..1193500) Bifidobacterium bifidum BGN4 13068867 YP_006394464.1 CDS pyrH NC_017999.1 1193581 1194384 R COG0528:Uridylate kinase; uridylate kinase complement(1193581..1194384) Bifidobacterium bifidum BGN4 13068868 YP_006394465.1 CDS BBB_0994 NC_017999.1 1194440 1195120 R hypothetical protein complement(1194440..1195120) Bifidobacterium bifidum BGN4 13068869 YP_006394466.1 CDS BBB_0995 NC_017999.1 1195074 1195220 D hypothetical protein 1195074..1195220 Bifidobacterium bifidum BGN4 13068870 YP_006394467.1 CDS tsf NC_017999.1 1195323 1196174 R COG0264:Translation elongation factor Ts; translation elongation factor Ts complement(1195323..1196174) Bifidobacterium bifidum BGN4 13068871 YP_006394468.1 CDS rpsB NC_017999.1 1196251 1197075 R COG0052:Ribosomal protein S2; 30S ribosomal protein S2 complement(1196251..1197075) Bifidobacterium bifidum BGN4 13068872 YP_006394469.1 CDS def NC_017999.1 1197276 1197764 R COG0242:N-formylmethionyl-tRNA deformylase; peptide deformylase complement(1197276..1197764) Bifidobacterium bifidum BGN4 13068873 YP_006394470.1 CDS fadD NC_017999.1 1197765 1199789 R COG1022:Long-chain acyl-CoA synthetases(AMP-forming); long-chain-fatty-acid--CoA ligase complement(1197765..1199789) Bifidobacterium bifidum BGN4 13068874 YP_006394471.1 CDS BBB_1000 NC_017999.1 1199865 1200359 R hypothetical protein complement(1199865..1200359) Bifidobacterium bifidum BGN4 13068875 YP_006394472.1 CDS BBB_1001 NC_017999.1 1200515 1201636 R COG0516:IMP dehydrogenase/GMP reductase; GMP reductase complement(1200515..1201636) Bifidobacterium bifidum BGN4 13068876 YP_006394473.1 CDS BBB_1002 NC_017999.1 1201796 1203016 D COG0538:Isocitrate dehydrogenases; isocitrate dehydrogenase 1201796..1203016 Bifidobacterium bifidum BGN4 13068877 YP_006394474.1 CDS sbpA NC_017999.1 1203184 1204797 D multiple sugar-binding periplasmic protein 1203184..1204797 Bifidobacterium bifidum BGN4 13068878 YP_006394475.1 CDS fadD NC_017999.1 1204944 1206758 R COG1022:Long-chain acyl-CoA synthetases(AMP-forming); long-chain-fatty-acid--CoA ligase complement(1204944..1206758) Bifidobacterium bifidum BGN4 13068879 YP_006394476.1 CDS BBB_1005 NC_017999.1 1206869 1207417 R COG0739:Membrane proteins related tometalloendopeptidases; peptidase complement(1206869..1207417) Bifidobacterium bifidum BGN4 13068880 YP_006394477.1 CDS gcp NC_017999.1 1208434 1209477 R COG0533:Metal-dependent proteases with possiblechaperone activity; putative O-sialoglyco protein endopeptidase complement(1208434..1209477) Bifidobacterium bifidum BGN4 13068882 YP_006394478.1 CDS rimI NC_017999.1 1209474 1210055 R COG0456:Acetyl transferases; ribosomal- protein-alanine acetyl transferase complement(1209474..1210055) Bifidobacterium bifidum BGN4 13068883 YP_006394479.1 CDS BBB_1008 NC_017999.1 1210055 1210921 R COG1214:Inactive homolog of metal-dependentproteases, putative molecular chaperone; inactive metal-dependent protease, putative molecular chaperone complement(1210055..1210921) Bifidobacterium bifidum BGN4 13068884 YP_006394480.1 CDS BBB_1009 NC_017999.1 1210981 1211592 R COG0802:Predicted ATPase or kinase; putative ATP-binding protein complement(1210981..1211592) Bifidobacterium bifidum BGN4 13068885 YP_006394481.1 CDS holA NC_017999.1 1211746 1212723 R COG1466:DNA polymerase III, delta subunit; DNA polymerase III subunit delta complement(1211746..1212723) Bifidobacterium bifidum BGN4 13068886 YP_006394482.1 CDS BBB_1011 NC_017999.1 1212671 1214722 R COG0658:Predicted membrane metal-binding protein; hypothetical protein complement(1212671..1214722) Bifidobacterium bifidum BGN4 13068887 YP_006394483.1 CDS comEA NC_017999.1 1214764 1215579 R COG1555:DNA uptake protein and related DNA-binding proteins; ComE operon protein complement(1214764..1215579) Bifidobacterium bifidum BGN4 13068888 YP_006394484.1 CDS BBB_1013 NC_017999.1 1215567 1215740 R hypothetical protein complement(1215567..1215740) Bifidobacterium bifidum BGN4 13068889 YP_006394485.1 CDS leuS NC_017999.1 1215765 1218743 R COG0495:Leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(1215765..1218743) Bifidobacterium bifidum BGN4 13068890 YP_006394486.1 CDS gluB NC_017999.1 1218868 1219797 R COG0834:ABC-type amino acid transport/signaltransduction systems, periplasmic component/domain; glutamate-binding protein complement(1218868..1219797) Bifidobacterium bifidum BGN4 13068891 YP_006394487.1 CDS corA NC_017999.1 1219808 1220758 R COG0598:Mg2+ and Co2+ transporters; magnesium transport protein complement(1219808..1220758) Bifidobacterium bifidum BGN4 13068892 YP_006394488.1 CDS gpmB NC_017999.1 1220903 1221739 R COG0406:Fructose-2,6-bisphosphatase; putative phosphoglycerate mutase complement(1220903..1221739) Bifidobacterium bifidum BGN4 13068893 YP_006394489.1 CDS BBB_1018 NC_017999.1 1221860 1223434 R COG2939:Carboxypeptidase C (cathepsin A); peptidase S10, serine carboxypeptidase complement(1221860..1223434) Bifidobacterium bifidum BGN4 13068894 YP_006394490.1 CDS BBB_1019 NC_017999.1 1223527 1227117 R COG4913:Uncharacterized protein conserved inbacteria; putative myosin complement(1223527..1227117) Bifidobacterium bifidum BGN4 13068895 YP_006394491.1 CDS BBB_1020 NC_017999.1 1227120 1228148 R hypothetical protein complement(1227120..1228148) Bifidobacterium bifidum BGN4 13068896 YP_006394492.1 CDS BBB_1021 NC_017999.1 1228150 1229670 R methyl-accepting chemotaxis protein complement(1228150..1229670) Bifidobacterium bifidum BGN4 13068897 YP_006394493.1 CDS nfo NC_017999.1 1229809 1230660 R COG0648:Endonuclease IV; putative endonuclease complement(1229809..1230660) Bifidobacterium bifidum BGN4 13068898 YP_006394494.1 CDS BBB_1023 NC_017999.1 1230732 1231091 R COG3189:Uncharacterized conserved protein; putative uroporphyrin-III C-methyl transferase complement(1230732..1231091) Bifidobacterium bifidum BGN4 13068899 YP_006394495.1 CDS BBB_1024 NC_017999.1 1231287 1231925 D COG1670:Acetyl transferases, including N-acetylasesof ribosomal proteins; putative acetyl transferase 1231287..1231925 Bifidobacterium bifidum BGN4 13068900 YP_006394496.1 CDS BBB_1025 NC_017999.1 1231961 1232458 D COG0454:Histone acetyl transferase HPA2 and relatedacetyl transferases; acetyl transferase 1231961..1232458 Bifidobacterium bifidum BGN4 13068901 YP_006394497.1 CDS BBB_1026 NC_017999.1 1233328 1233573 R COG1051:ADP-ribose pyrophosphatase; putative nucleoside triphosphatepyrophosphohydrolase complement(1233328..1233573) Bifidobacterium bifidum BGN4 13068902 YP_006394498.1 CDS BBB_1027 NC_017999.1 1233602 1233892 R COG0388:Predicted amidohydrolase; putative amidohydrolase complement(1233602..1233892) Bifidobacterium bifidum BGN4 13068903 YP_006394499.1 CDS BBB_1028 NC_017999.1 1233881 1234078 D putative permease 1233881..1234078 Bifidobacterium bifidum BGN4 13068904 YP_006394500.1 CDS BBB_1029 NC_017999.1 1234239 1234424 R hypothetical protein complement(1234239..1234424) Bifidobacterium bifidum BGN4 13068905 YP_006394501.1 CDS BBB_1030 NC_017999.1 1234408 1235370 R COG3981:Predicted acetyl transferase; GCN5- related N-acetyl transferase complement(1234408..1235370) Bifidobacterium bifidum BGN4 13068906 YP_006394502.1 CDS tnp NC_017999.1 1235463 1235729 D transposase-like protein 1235463..1235729 Bifidobacterium bifidum BGN4 13068907 YP_006394503.1 CDS BBB_1032 NC_017999.1 1236154 1236849 D COG2135:Uncharacterized conserved protein; hypothetical protein 1236154..1236849 Bifidobacterium bifidum BGN4 13068908 YP_006394504.1 CDS BBB_1033 NC_017999.1 1237864 1238262 R COG0346:Lactoylglutathione lyase and relatedlyases; putative lactoylglutathione lyase complement(1237864..1238262) Bifidobacterium bifidum BGN4 13068909 YP_006394505.1 CDS BBB_1034 NC_017999.1 1238688 1239707 D hypothetical protein 1238688..1239707 Bifidobacterium bifidum BGN4 13068910 YP_006394506.1 CDS BBB_1035 NC_017999.1 1239797 1239934 D hypothetical protein 1239797..1239934 Bifidobacterium bifidum BGN4 13068911 YP_006394507.1 CDS BBB_1036 NC_017999.1 1239988 1240872 R COG0477:Permeases of the major facilitatorsuperfamily; putative MFS-type transporter complement(1239988..1240872) Bifidobacterium bifidum BGN4 13068912 YP_006394508.1 CDS BBB_1037 NC_017999.1 1240890 1241366 D hypothetical protein 1240890..1241366 Bifidobacterium bifidum BGN4 13068913 YP_006394509.1 CDS BBB_1038 NC_017999.1 1241303 1242244 D hypothetical protein 1241303..1242244 Bifidobacterium bifidum BGN4 13068914 YP_006394510.1 CDS BBB_1039 NC_017999.1 1242252 1242386 D hypothetical protein 1242252..1242386 Bifidobacterium bifidum BGN4 13068915 YP_006394511.1 CDS BBB_1040 NC_017999.1 1242414 1243034 D COG4905:Predicted membrane protein; transmembrane protein 1242414..1243034 Bifidobacterium bifidum BGN4 13068916 YP_006394512.1 CDS nqo NC_017999.1 1243010 1243612 R COG2249:Putative NADPH-quinone reductase (modulatorof drug activity B); ribosyldihydronicotinamide dehydrogenase complement(1243010..1243612) Bifidobacterium bifidum BGN4 13068917 YP_006394513.1 CDS vanZ NC_017999.1 1243659 1244678 R COG4767:Glycopeptide antibiotics resistance protein; teicoplanin resistance protein complement(1243659..1244678) Bifidobacterium bifidum BGN4 13068918 YP_006394514.1 CDS BBB_1043 NC_017999.1 1244970 1245791 D two- component response regulator 1244970..1245791 Bifidobacterium bifidum BGN4 13068919 YP_006394515.1 CDS BBB_1044 NC_017999.1 1245970 1246374 R COG3576:Predicted flavin-nucleotide-binding proteinstructurally related to pyridoxine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase family protein complement(1245970..1246374) Bifidobacterium bifidum BGN4 13068920 YP_006394516.1 CDS BBB_1045 NC_017999.1 1246502 1247269 R COG3738:Uncharacterized protein conserved inbacteria; hypothetical protein complement(1246502..1247269) Bifidobacterium bifidum BGN4 13068921 YP_006394517.1 CDS nfnB NC_017999.1 1247647 1248342 D COG0778:Nitroreductase; nitroreductase 1247647..1248342 Bifidobacterium bifidum BGN4 13068922 YP_006394518.1 CDS BBB_1047 NC_017999.1 1248479 1249705 D hypothetical protein 1248479..1249705 Bifidobacterium bifidum BGN4 13068923 YP_006394519.1 CDS BBB_1048 NC_017999.1 1250389 1251672 R COG0366:Glycosidases; putative cyclomaltodextrinase or neopullalanase complement(1250389..1251672) Bifidobacterium bifidum BGN4 13068925 YP_006394520.1 CDS BBB_1049 NC_017999.1 1251712 1252155 R hypothetical protein complement(1251712..1252155) Bifidobacterium bifidum BGN4 13068926 YP_006394521.1 CDS gpmB NC_017999.1 1252292 1252987 R COG0406:Fructose-2,6-bisphosphatase; putative phosphoglycerate mutase complement(1252292..1252987) Bifidobacterium bifidum BGN4 13068927 YP_006394522.1 CDS BBB_1051 NC_017999.1 1253007 1253444 R COG0799:Uncharacterized homolog of plant Iojap protein; putative Iojap protein complement(1253007..1253444) Bifidobacterium bifidum BGN4 13068928 YP_006394523.1 CDS glmU NC_017999.1 1253449 1254831 R COG1207:N-acetylglucosamine-1-phosphateuridyl transferase (contains nucleotidyl transferase andI-patch acety; UDP-N- acetylglucosaminediphosphorylase/glucosamine-1-phosphateN- acetyl transferase complement(1253449..1254831) Bifidobacterium bifidum BGN4 13068929 YP_006394524.1 CDS prs NC_017999.1 1255041 1256060 R COG0462:Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase complement(1255041..1256060) Bifidobacterium bifidum BGN4 13068931 YP_006394525.1 CDS nadD NC_017999.1 1256198 1256953 R COG1057:Nicotinic acid mononucleotideadenylyl transferase; nicotinate (nicotinamide) nucleotideadenylyl transferase complement(1256198..1256953) Bifidobacterium bifidum BGN4 13068932 YP_006394526.1 CDS BBB_1055 NC_017999.1 1256953 1257504 R phosphoribosylformylglycinamidine (FGAM)synthase complement(1256953..1257504) Bifidobacterium bifidum BGN4 13068933 YP_006394527.1 CDS proA NC_017999.1 1257501 1258799 R COG0014:Gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(1257501..1258799) Bifidobacterium bifidum BGN4 13068934 YP_006394528.1 CDS thrC NC_017999.1 1258995 1260482 D COG0498:Threonine synthase; threonine synthase 1258995..1260482 Bifidobacterium bifidum BGN4 13068935 YP_006394529.1 CDS BBB_1058 NC_017999.1 1260516 1261226 R hypothetical protein complement(1260516..1261226) Bifidobacterium bifidum BGN4 13068936 YP_006394530.1 CDS mgtA NC_017999.1 1261228 1261947 R cation transport ATPase complement(1261228..1261947) Bifidobacterium bifidum BGN4 13068937 YP_006394531.1 CDS nodI NC_017999.1 1261952 1262911 R COG1131:ABC-type multidrug transport system, ATPase component; Nod factor export ATP-binding protein complement(1261952..1262911) Bifidobacterium bifidum BGN4 13068938 YP_006394532.1 CDS BBB_1061 NC_017999.1 1263007 1263381 R COG1725:Predicted transcriptional regulators; fatty acyl-responsive regulator complement(1263007..1263381) Bifidobacterium bifidum BGN4 13068939 YP_006394533.1 CDS yqaB NC_017999.1 1263502 1264161 R COG0637:Predicted phosphatase/phosphohexomutase; phosphatase complement(1263502..1264161) Bifidobacterium bifidum BGN4 13068940 YP_006394534.1 CDS recN NC_017999.1 1264220 1265986 R COG0497:ATPase involved in DNA repair; DNA repair protein complement(1264220..1265986) Bifidobacterium bifidum BGN4 13068941 YP_006394535.1 CDS ppnK NC_017999.1 1265979 1266953 R COG0061:Predicted sugar kinase; putative inorganic polyphosphate/ATP-NAD kinase complement(1265979..1266953) Bifidobacterium bifidum BGN4 13068942 YP_006394536.1 CDS BBB_1065 NC_017999.1 1267214 1268677 D COG0168:Trk-type K+ transport systems, membrane components; putative cation transporter 1267214..1268677 Bifidobacterium bifidum BGN4 13068943 YP_006394537.1 CDS BBB_1066 NC_017999.1 1268858 1269511 D COG0569:K+ transport systems, NAD-binding component; potassium uptake protein 1268858..1269511 Bifidobacterium bifidum BGN4 13068944 YP_006394538.1 CDS BBB_1067 NC_017999.1 1269659 1270333 D hypothetical protein 1269659..1270333 Bifidobacterium bifidum BGN4 13068945 YP_006394539.1 CDS tlyA NC_017999.1 1270369 1271127 R COG1189:Predicted rRNA methylase; hemolysin A complement(1270369..1271127) Bifidobacterium bifidum BGN4 13068946 YP_006394540.1 CDS BBB_1069 NC_017999.1 1271176 1271304 R hypothetical protein complement(1271176..1271304) Bifidobacterium bifidum BGN4 13068947 YP_006394541.1 CDS nagD NC_017999.1 1271385 1272419 R COG0647:Predicted sugar phosphatases of the HADsuperfamily; N-acetylglucosamine-6-phosphate deacetylase complement(1271385..1272419) Bifidobacterium bifidum BGN4 13068948 YP_006394542.1 CDS BBB_1071 NC_017999.1 1272425 1274224 R hypothetical protein complement(1272425..1274224) Bifidobacterium bifidum BGN4 13068949 YP_006394543.1 CDS tyrS NC_017999.1 1274358 1275680 R COG0162:Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(1274358..1275680) Bifidobacterium bifidum BGN4 13068950 YP_006394544.1 CDS BBB_1073 NC_017999.1 1275817 1276596 R COG4905:Predicted membrane protein; hypothetical protein complement(1275817..1276596) Bifidobacterium bifidum BGN4 13068951 YP_006394545.1 CDS BBB_1074 NC_017999.1 1276596 1277183 R COG1418:Predicted HD superfamily hydrolase; putative HD superfamily hydrolase complement(1276596..1277183) Bifidobacterium bifidum BGN4 13068952 YP_006394546.1 CDS argH NC_017999.1 1277317 1278804 R COG0165:Argininosuccinate lyase; argininosuccinate lyase complement(1277317..1278804) Bifidobacterium bifidum BGN4 13068953 YP_006394547.1 CDS hsdR NC_017999.1 1278958 1282242 R COG0610:Type I site-specificrestriction-modification system, R (restriction) subunitand related helicases; type-1 restriction enzyme R protein complement(1278958..1282242) Bifidobacterium bifidum BGN4 13068954 YP_006394548.1 CDS BBB_1077 NC_017999.1 1282239 1283807 R transcriptional regulator complement(1282239..1283807) Bifidobacterium bifidum BGN4 13068955 YP_006394549.1 CDS hsdS NC_017999.1 1283822 1285009 R COG0732:Restriction endonuclease S subunits; putative type I restriction enzyme specificity protein complement(1283822..1285009) Bifidobacterium bifidum BGN4 13068956 YP_006394550.1 CDS hsdM NC_017999.1 1285009 1287576 R COG0286:Type I restriction-modification systemmethyl transferase subunit; type I restriction-modification system, M subunit complement(1285009..1287576) Bifidobacterium bifidum BGN4 13068957 YP_006394551.1 CDS BBB_1080 NC_017999.1 1287569 1288132 R methionine sulfoxide reductase A complement(1287569..1288132) Bifidobacterium bifidum BGN4 13068958 YP_006394552.1 CDS BBB_1081 NC_017999.1 1288412 1288618 R hypothetical protein complement(1288412..1288618) Bifidobacterium bifidum BGN4 13068959 YP_006394553.1 CDS xerC NC_017999.1 1289209 1290138 D COG0582:Integrase; putative tyrosine recombinase 1289209..1290138 Bifidobacterium bifidum BGN4 13068960 YP_006394554.1 CDS argG NC_017999.1 1290767 1292005 R COG0137:Argininosuccinate synthase; argininosuccinate synthase complement(1290767..1292005) Bifidobacterium bifidum BGN4 13068961 YP_006394555.1 CDS argR NC_017999.1 1292110 1292628 R COG1438:Arginine repressor; arginine repressor complement(1292110..1292628) Bifidobacterium bifidum BGN4 13068962 YP_006394556.1 CDS argF NC_017999.1 1292701 1293666 R COG0078:Ornithine carbamoyl transferase; ornithine carbamoyl transferase complement(1292701..1293666) Bifidobacterium bifidum BGN4 13068963 YP_006394557.1 CDS argD NC_017999.1 1293769 1295058 R COG4992:Ornithine/acetylornithine amino transferase; acetylornithine amino transferase complement(1293769..1295058) Bifidobacterium bifidum BGN4 13068964 YP_006394558.1 CDS argB NC_017999.1 1295048 1296004 R COG0548:Acetylglutamate kinase; acetylglutamate kinase complement(1295048..1296004) Bifidobacterium bifidum BGN4 13068965 YP_006394559.1 CDS argJ NC_017999.1 1296064 1297233 R COG1364:N-acetylglutamate synthase(N-acetylornithine amino transferase); arginine biosynthesis bifunctional protein complement(1296064..1297233) Bifidobacterium bifidum BGN4 13068966 YP_006394560.1 CDS argC NC_017999.1 1297230 1298324 R COG0002:Acetylglutamate semialdehyde dehydrogenase; N-acetyl-gamma-glutamyl-phosphate reductase complement(1297230..1298324) Bifidobacterium bifidum BGN4 13068967 YP_006394561.1 CDS BBB_1090 NC_017999.1 1298427 1299080 R hypothetical protein complement(1298427..1299080) Bifidobacterium bifidum BGN4 13068968 YP_006394562.1 CDS pheT NC_017999.1 1299115 1301724 R COG0072:Phenylalanyl-tRNA synthetase beta subunit; phenylalanyl-tRNA synthetase subunit beta complement(1299115..1301724) Bifidobacterium bifidum BGN4 13068969 YP_006394563.1 CDS pheS NC_017999.1 1301732 1302799 R COG0016:Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha complement(1301732..1302799) Bifidobacterium bifidum BGN4 13068970 YP_006394564.1 CDS BBB_1093 NC_017999.1 1302888 1303757 R COG0566:rRNA methylases; putative rRNA methylase complement(1302888..1303757) Bifidobacterium bifidum BGN4 13068971 YP_006394565.1 CDS BBB_1094 NC_017999.1 1303726 1303845 D hypothetical protein 1303726..1303845 Bifidobacterium bifidum BGN4 13068972 YP_006394566.1 CDS ybbL NC_017999.1 1303896 1304657 D COG4619:ABC-type uncharacterized transportsystem, ATPase component; ABC transporter ATP-binding protein 1303896..1304657 Bifidobacterium bifidum BGN4 13068973 YP_006394567.1 CDS BBB_1096 NC_017999.1 1304654 1305445 D COG0390:ABC-type uncharacterized transportsystem, permease component; hypothetical protein 1304654..1305445 Bifidobacterium bifidum BGN4 13068974 YP_006394568.1 CDS BBB_1097 NC_017999.1 1305506 1305799 R short-chain alcohol dehydrogenase complement(1305506..1305799) Bifidobacterium bifidum BGN4 13068975 YP_006394569.1 CDS BBB_1098 NC_017999.1 1305873 1306058 R hypothetical protein complement(1305873..1306058) Bifidobacterium bifidum BGN4 13068976 YP_006394570.1 CDS BBB_1099 NC_017999.1 1306292 1306753 D COG2207:AraC-type DNA-binding domain-containing proteins; hypothetical protein 1306292..1306753 Bifidobacterium bifidum BGN4 13068977 YP_006394571.1 CDS rutG NC_017999.1 1306885 1308174 R COG2233:Xanthine/uracil permeases; putative pyrimidine permease complement(1306885..1308174) Bifidobacterium bifidum BGN4 13068978 YP_006394572.1 CDS BBB_1101 NC_017999.1 1308332 1309144 R phosphoglycerate mutase complement(1308332..1309144) Bifidobacterium bifidum BGN4 13068979 YP_006394573.1 CDS BBB_1102 NC_017999.1 1309528 1310121 D phospholipase/Carboxylesterase 1309528..1310121 Bifidobacterium bifidum BGN4 13068980 YP_006394574.1 CDS BBB_1103 NC_017999.1 1310216 1311280 R COG2855:Predicted membrane protein; hypothetical protein complement(1310216..1311280) Bifidobacterium bifidum BGN4 13068981 YP_006394575.1 CDS BBB_1104 NC_017999.1 1311300 1311419 R hypothetical protein complement(1311300..1311419) Bifidobacterium bifidum BGN4 13068982 YP_006394576.1 CDS ywfK NC_017999.1 1311529 1312344 R COG0583:Transcriptional regulator; HTH-type transcriptional regulator complement(1311529..1312344) Bifidobacterium bifidum BGN4 13068983 YP_006394577.1 CDS serB NC_017999.1 1312429 1313067 R phosphoserine phosphatase complement(1312429..1313067) Bifidobacterium bifidum BGN4 13068984 YP_006394578.1 CDS wcaA NC_017999.1 1313109 1314608 R COG0463:Glycosyl transferases involved in cell wallbiogenesis; putative glycosyl transferase complement(1313109..1314608) Bifidobacterium bifidum BGN4 13068985 YP_006394579.1 CDS BBB_1108 NC_017999.1 1314975 1315211 D hypothetical protein 1314975..1315211 Bifidobacterium bifidum BGN4 13068986 YP_006394580.1 CDS BBB_1109 NC_017999.1 1315292 1315486 R hypothetical protein complement(1315292..1315486) Bifidobacterium bifidum BGN4 13068987 YP_006394581.1 CDS pknB NC_017999.1 1315799 1318096 D transmembrane serine/threonine- protein kinase B 1315799..1318096 Bifidobacterium bifidum BGN4 13068988 YP_006394582.1 CDS BBB_1111 NC_017999.1 1318108 1318755 R COG0400:Predicted esterase; putative phospholipase/carboxylesterase complement(1318108..1318755) Bifidobacterium bifidum BGN4 13068989 YP_006394583.1 CDS BBB_1112 NC_017999.1 1319017 1319136 R hypothetical protein complement(1319017..1319136) Bifidobacterium bifidum BGN4 13068990 YP_006394584.1 CDS def NC_017999.1 1319120 1319545 D COG0242:N-formylmethionyl-tRNA deformylase; peptide deformylase 1319120..1319545 Bifidobacterium bifidum BGN4 13068991 YP_006394585.1 CDS BBB_1114 NC_017999.1 1319617 1320042 R hypothetical protein complement(1319617..1320042) Bifidobacterium bifidum BGN4 13068992 YP_006394586.1 CDS BBB_1115 NC_017999.1 1320097 1320306 R COG3478:Predicted nucleic-acid-binding proteincontaining a Zn-ribbon domain; putative nucleic acid binding protein complement(1320097..1320306) Bifidobacterium bifidum BGN4 13068993 YP_006394587.1 CDS BBB_1116 NC_017999.1 1320554 1320679 D hypothetical protein 1320554..1320679 Bifidobacterium bifidum BGN4 13068994 YP_006394588.1 CDS BBB_1117 NC_017999.1 1320759 1321127 R COG3824:Uncharacterized protein conserved inbacteria; putative Zn-dependent protease complement(1320759..1321127) Bifidobacterium bifidum BGN4 13068995 YP_006394589.1 CDS BBB_1118 NC_017999.1 1321332 1321919 D transcriptional regulator 1321332..1321919 Bifidobacterium bifidum BGN4 13068996 YP_006394590.1 CDS BBB_1119 NC_017999.1 1322192 1323433 R COG4260:Putative virion core protein (lumpy skindisease virus); putative virion core protein complement(1322192..1323433) Bifidobacterium bifidum BGN4 13068997 YP_006394591.1 CDS BBB_1120 NC_017999.1 1323611 1325083 R hypothetical protein complement(1323611..1325083) Bifidobacterium bifidum BGN4 13068998 YP_006394592.1 CDS BBB_1121 NC_017999.1 1325070 1325195 R hypothetical protein complement(1325070..1325195) Bifidobacterium bifidum BGN4 13068999 YP_006394593.1 CDS BBB_1122 NC_017999.1 1325484 1325924 D hypothetical protein 1325484..1325924 Bifidobacterium bifidum BGN4 13069000 YP_006394594.1 CDS pknB NC_017999.1 1326060 1327730 D COG0515:Serine/threonine protein kinase; putative serine/threonine- protein kinase 1326060..1327730 Bifidobacterium bifidum BGN4 13069001 YP_006394595.1 CDS BBB_1124 NC_017999.1 1327864 1328169 R COG1917:Uncharacterized conserved protein, containsdouble-stranded beta-helix domain; hypothetical protein complement(1327864..1328169) Bifidobacterium bifidum BGN4 13069002 YP_006394596.1 CDS BBB_1125 NC_017999.1 1328474 1328608 D hypothetical protein 1328474..1328608 Bifidobacterium bifidum BGN4 13069003 YP_006394597.1 CDS BBB_1126 NC_017999.1 1328690 1329556 R COG0500:SAM-dependent methyl transferases; methyl transferase type 11 complement(1328690..1329556) Bifidobacterium bifidum BGN4 13069004 YP_006394598.1 CDS yccF NC_017999.1 1329846 1330211 D COG3304:Predicted membrane protein; inner membrane protein 1329846..1330211 Bifidobacterium bifidum BGN4 13069005 YP_006394599.1 CDS BBB_1128 NC_017999.1 1330246 1330878 R acetyl transferase complement(1330246..1330878) Bifidobacterium bifidum BGN4 13069006 YP_006394600.1 CDS fic NC_017999.1 1331560 1332876 D COG3177:Uncharacterized conserved protein; cell filamentation protein 1331560..1332876 Bifidobacterium bifidum BGN4 13069007 YP_006394601.1 CDS BBB_1130 NC_017999.1 1332946 1333065 R hypothetical protein complement(1332946..1333065) Bifidobacterium bifidum BGN4 13069008 YP_006394602.1 CDS engD NC_017999.1 1333270 1334364 R COG0012:Predicted GTPase, probable translationfactor; GTP-dependent nucleic acid-binding protein complement(1333270..1334364) Bifidobacterium bifidum BGN4 13069009 YP_006394603.1 CDS mtnE NC_017999.1 1334601 1335803 R COG0436:Aspartate/tyrosine/aromaticamino transferase; transaminase complement(1334601..1335803) Bifidobacterium bifidum BGN4 13069010 YP_006394604.1 CDS metI NC_017999.1 1335985 1336665 R COG2011:ABC-type metal ion transportsystem, permease component; putative D-methionine transport system permease complement(1335985..1336665) Bifidobacterium bifidum BGN4 13069011 YP_006394605.1 CDS metN NC_017999.1 1336658 1337725 R COG1135:ABC-type metal ion transport system, ATPase component; methionine import ATP-binding protein complement(1336658..1337725) Bifidobacterium bifidum BGN4 13069012 YP_006394606.1 CDS acoB NC_017999.1 1337797 1338831 R COG0022:Pyruvate/2-oxoglutarate dehydrogenasecomplex, dehydrogenase (E1) component, eukaryotic type, betas; 2,6-dichlorophenolindophenol oxidoreductase subunit beta complement(1337797..1338831) Bifidobacterium bifidum BGN4 13069013 YP_006394607.1 CDS acoA NC_017999.1 1338824 1339810 R COG1071:Pyruvate/2-oxoglutarate dehydrogenasecomplex, dehydrogenase (E1) component, eukaryotictype, alpha; 2,6-dichlorophenolindophenol oxidoreductase subunit alpha complement(1338824..1339810) Bifidobacterium bifidum BGN4 13069014 YP_006394608.1 CDS metQ NC_017999.1 1340189 1341010 R COG1464:ABC-type metal ion transportsystem, periplasmic component/surface antigen; D-methionine-binding lipo protein complement(1340189..1341010) Bifidobacterium bifidum BGN4 13069015 YP_006394609.1 CDS BBB_1138 NC_017999.1 1341069 1341293 D hypothetical protein 1341069..1341293 Bifidobacterium bifidum BGN4 13069016 YP_006394610.1 CDS iaaA NC_017999.1 1341435 1342376 D COG1446:Asparaginase; isoaspartyl peptidase 1341435..1342376 Bifidobacterium bifidum BGN4 13069017 YP_006394611.1 CDS proC NC_017999.1 1342531 1343334 R COG0345:Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase complement(1342531..1343334) Bifidobacterium bifidum BGN4 13069018 YP_006394612.1 CDS pap NC_017999.1 1343420 1344823 R COG0596:Predicted hydrolases or acyl transferases(alpha/beta hydrolase superfamily); proline iminopeptidase complement(1343420..1344823) Bifidobacterium bifidum BGN4 13069019 YP_006394613.1 CDS yxjM NC_017999.1 1345017 1347674 D COG4585:Signal transduction histidine kinase; putative sensor-like histidine kinase 1345017..1347674 Bifidobacterium bifidum BGN4 13069020 YP_006394614.1 CDS BBB_1143 NC_017999.1 1347782 1348528 D COG2197:Response regulator containing a CheY-likereceiver domain and an HTH DNA-binding domain; response regulator of two- component system 1347782..1348528 Bifidobacterium bifidum BGN4 13069021 YP_006394615.1 CDS phoC NC_017999.1 1348599 1351469 R COG0671:Membrane-associated phospholipidphosphatase; acid phosphatase complement(1348599..1351469) Bifidobacterium bifidum BGN4 13069022 YP_006394616.1 CDS yknZ NC_017999.1 1351848 1354556 R COG0577:ABC-type antimicrobial peptide transportsystem, permease component; ABC transporter permease complement(1351848..1354556) Bifidobacterium bifidum BGN4 13069023 YP_006394617.1 CDS lolD NC_017999.1 1354583 1355626 R COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; lipo protein-releasing system ATP-binding protein complement(1354583..1355626) Bifidobacterium bifidum BGN4 13069024 YP_006394618.1 CDS BBB_1147 NC_017999.1 1357640 1358185 D hypothetical protein 1357640..1358185 Bifidobacterium bifidum BGN4 13069025 YP_006394619.1 CDS BBB_1148 NC_017999.1 1358273 1358413 D hypothetical protein 1358273..1358413 Bifidobacterium bifidum BGN4 13069026 YP_006394620.1 CDS BBB_1149 NC_017999.1 1358822 1360138 R COG2873:O-acetylhomoserine sulfhydrylase; O-acetylhomoserine (thiol)-lyase complement(1358822..1360138) Bifidobacterium bifidum BGN4 13069027 YP_006394621.1 CDS BBB_1150 NC_017999.1 1360091 1360303 D hypothetical protein 1360091..1360303 Bifidobacterium bifidum BGN4 13069028 YP_006394622.1 CDS BBB_1151 NC_017999.1 1360384 1361229 R COG4905:Predicted membrane protein; hypothetical protein complement(1360384..1361229) Bifidobacterium bifidum BGN4 13069029 YP_006394623.1 CDS pdxK NC_017999.1 1361493 1362368 D COG2240:Pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxine kinase 1361493..1362368 Bifidobacterium bifidum BGN4 13069030 YP_006394624.1 CDS sdhA NC_017999.1 1362514 1364529 R COG1053:Succinate dehydrogenase/fumaratereductase, flavo protein subunit; succinate dehydrogenase flavo protein subunit complement(1362514..1364529) Bifidobacterium bifidum BGN4 13069031 YP_006394625.1 CDS BBB_1154 NC_017999.1 1364750 1365070 D COG3695:Predicted methylated DNA- protein cysteinemethyl transferase; bifunctional methyl transferase/endonuclease 1364750..1365070 Bifidobacterium bifidum BGN4 13069032 YP_006394626.1 CDS BBB_1155 NC_017999.1 1365128 1366642 R COG0758:Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; putative DNA processing protein complement(1365128..1366642) Bifidobacterium bifidum BGN4 13069033 YP_006394627.1 CDS BBB_1156 NC_017999.1 1366639 1368168 R COG0606:Predicted ATPase with chaperone activity; Mg chelatase subunit ChlI complement(1366639..1368168) Bifidobacterium bifidum BGN4 13069034 YP_006394628.1 CDS BBB_1157 NC_017999.1 1368168 1368635 R COG0792:Predicted endonuclease distantly related toarchaeal Holliday junction resolvase; hypothetical protein complement(1368168..1368635) Bifidobacterium bifidum BGN4 13069035 YP_006394629.1 CDS frdB NC_017999.1 1368863 1369834 D COG0479:Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit 1368863..1369834 Bifidobacterium bifidum BGN4 13069036 YP_006394630.1 CDS mdmC NC_017999.1 1369880 1370551 D COG4122:Predicted O-methyl transferase; O-methyl transferase 1369880..1370551 Bifidobacterium bifidum BGN4 13069037 YP_006394631.1 CDS BBB_1160 NC_017999.1 1370548 1371489 R COG1611:Predicted Rossmann fold nucleotide-binding protein; putative Rossmann fold nucleotide-binding protein complement(1370548..1371489) Bifidobacterium bifidum BGN4 13069038 YP_006394632.1 CDS nhaA NC_017999.1 1371541 1372809 R COG3004:Na+/H+ antiporter; Na(+)/H(+) antiporter complement(1371541..1372809) Bifidobacterium bifidum BGN4 13069039 YP_006394633.1 CDS patB NC_017999.1 1373533 1374801 R COG1168:Bifunctional PLP-dependent enzyme withbeta-cystathionase and maltose regulon repressoractivities; putative amino transferase B complement(1373533..1374801) Bifidobacterium bifidum BGN4 13069040 YP_006394634.1 CDS clpX NC_017999.1 1375147 1376460 R COG1219:ATP-dependent protease Clp, ATPase subunit; ATP-dependent Clp protease, ATP-binding subunit complement(1375147..1376460) Bifidobacterium bifidum BGN4 13069043 YP_006394635.1 CDS clpP NC_017999.1 1376561 1377280 R COG0740:Protease subunit of ATP-dependent Clpproteases; ATP-dependent Clp protease proteolytic subunit complement(1376561..1377280) Bifidobacterium bifidum BGN4 13069044 YP_006394636.1 CDS clpP NC_017999.1 1377286 1377897 R COG0740:Protease subunit of ATP-dependent Clpproteases; ATP-dependent Clp protease proteolytic subunit complement(1377286..1377897) Bifidobacterium bifidum BGN4 13069045 YP_006394637.1 CDS clcB NC_017999.1 1378402 1379805 R COG0038:Chloride channel protein EriC; voltage-gated ClC-type chloride channel complement(1378402..1379805) Bifidobacterium bifidum BGN4 13069046 YP_006394638.1 CDS tig NC_017999.1 1380011 1381396 R COG0544:FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor); trigger factor complement(1380011..1381396) Bifidobacterium bifidum BGN4 13069047 YP_006394639.1 CDS BBB_1168 NC_017999.1 1381449 1382819 R COG0349:Ribonuclease D; 3'-5' exonuclease complement(1381449..1382819) Bifidobacterium bifidum BGN4 13069048 YP_006394640.1 CDS BBB_1169 NC_017999.1 1382725 1383315 R hypothetical protein complement(1382725..1383315) Bifidobacterium bifidum BGN4 13069049 YP_006394641.1 CDS pflA NC_017999.1 1383451 1384332 R COG1180:Pyruvate-formate lyase-activating enzyme; pyruvate formate-lyase activating enzyme complement(1383451..1384332) Bifidobacterium bifidum BGN4 13069050 YP_006394642.1 CDS pflB NC_017999.1 1384524 1386899 R COG1882:Pyruvate-formate lyase; formate acetyl transferase complement(1384524..1386899) Bifidobacterium bifidum BGN4 13069051 YP_006394643.1 CDS BBB_1172 NC_017999.1 1387019 1387255 R hypothetical protein complement(1387019..1387255) Bifidobacterium bifidum BGN4 13069052 YP_006394644.1 CDS nadE NC_017999.1 1387333 1389030 R COG0171:NAD synthase; glutamine-dependent NAD(+) synthetase complement(1387333..1389030) Bifidobacterium bifidum BGN4 13069053 YP_006394645.1 CDS ytnL NC_017999.1 1389113 1390264 R COG1473:Metal- dependentamidase/aminoacylase/carboxypeptidase; putative hydrolase complement(1389113..1390264) Bifidobacterium bifidum BGN4 13069054 YP_006394646.1 CDS metN NC_017999.1 1390301 1390852 R COG1135:ABC-type metal ion transport system, ATPase component; methionine import ATP-binding protein complement(1390301..1390852) Bifidobacterium bifidum BGN4 13069055 YP_006394647.1 CDS BBB_1176 NC_017999.1 1391022 1391855 D COG0561:Predicted hydrolases of the HADsuperfamily; putative Had-type hydrolase 1391022..1391855 Bifidobacterium bifidum BGN4 13069056 YP_006394648.1 CDS ppiA NC_017999.1 1392001 1392540 R COG0652:Peptidyl-prolyl cis-trans isomerase(rotamase) - cyclophilin family; putative peptidyl-prolyl cis-trans isomerase A complement(1392001..1392540) Bifidobacterium bifidum BGN4 13069057 YP_006394649.1 CDS BBB_1178 NC_017999.1 1393235 1393444 D Xre-type transcriptional regulator 1393235..1393444 Bifidobacterium bifidum BGN4 13069058 YP_006394650.1 CDS BBB_1179 NC_017999.1 1393639 1394436 R acetyl transferase complement(1393639..1394436) Bifidobacterium bifidum BGN4 13069059 YP_006394651.1 CDS BBB_1180 NC_017999.1 1394619 1394765 D hypothetical protein 1394619..1394765 Bifidobacterium bifidum BGN4 13069060 YP_006394652.1 CDS BBB_1181 NC_017999.1 1394762 1394917 D hypothetical protein 1394762..1394917 Bifidobacterium bifidum BGN4 13069061 YP_006394653.1 CDS BBB_1182 NC_017999.1 1394914 1396044 D hypothetical protein 1394914..1396044 Bifidobacterium bifidum BGN4 13069062 YP_006394654.1 CDS BBB_1183 NC_017999.1 1396041 1396295 D hypothetical protein 1396041..1396295 Bifidobacterium bifidum BGN4 13069063 YP_006394655.1 CDS BBB_1184 NC_017999.1 1396310 1396789 D hypothetical protein 1396310..1396789 Bifidobacterium bifidum BGN4 13069064 YP_006394656.1 CDS parA NC_017999.1 1396929 1397573 D COG1192:ATPases involved in chromosomepartitioning; putative DNA partition protein 1396929..1397573 Bifidobacterium bifidum BGN4 13069065 YP_006394657.1 CDS BBB_1186 NC_017999.1 1397579 1397851 D hypothetical protein 1397579..1397851 Bifidobacterium bifidum BGN4 13069066 YP_006394658.1 CDS BBB_1187 NC_017999.1 1397880 1398803 D colicin uptake related membrane protein 1397880..1398803 Bifidobacterium bifidum BGN4 13069067 YP_006394659.1 CDS BBB_1188 NC_017999.1 1399321 1400634 R hypothetical protein complement(1399321..1400634) Bifidobacterium bifidum BGN4 13069068 YP_006394660.1 CDS BBB_1189 NC_017999.1 1400677 1401045 R hypothetical protein complement(1400677..1401045) Bifidobacterium bifidum BGN4 13069069 YP_006394661.1 CDS BBB_1190 NC_017999.1 1401070 1401483 R hypothetical protein complement(1401070..1401483) Bifidobacterium bifidum BGN4 13069070 YP_006394662.1 CDS BBB_1191 NC_017999.1 1401591 1402100 R hypothetical protein complement(1401591..1402100) Bifidobacterium bifidum BGN4 13069071 YP_006394663.1 CDS topB NC_017999.1 1402152 1404359 R COG0550:Topoisomerase IA; DNA topoisomerase complement(1402152..1404359) Bifidobacterium bifidum BGN4 13069072 YP_006394664.1 CDS BBB_1193 NC_017999.1 1404379 1404873 R hypothetical protein complement(1404379..1404873) Bifidobacterium bifidum BGN4 13069073 YP_006394665.1 CDS BBB_1194 NC_017999.1 1404670 1405515 D hypothetical protein 1404670..1405515 Bifidobacterium bifidum BGN4 13069074 YP_006394666.1 CDS BBB_1195 NC_017999.1 1405639 1405887 D hypothetical protein 1405639..1405887 Bifidobacterium bifidum BGN4 13069075 YP_006394667.1 CDS mobC NC_017999.1 1406336 1406716 D bacterial mobilization protein 1406336..1406716 Bifidobacterium bifidum BGN4 13069076 YP_006394668.1 CDS BBB_1197 NC_017999.1 1406719 1408353 D COG3843:Type IV secretory pathway, VirD2 components(relaxase); putative type IV secretory pathway VirD2 components (relaxase) protein 1406719..1408353 Bifidobacterium bifidum BGN4 13069077 YP_006394669.1 CDS mobA NC_017999.1 1408398 1409477 D mobilization protein 1408398..1409477 Bifidobacterium bifidum BGN4 13069078 YP_006394670.1 CDS BBB_1199 NC_017999.1 1409847 1411433 D hypothetical protein 1409847..1411433 Bifidobacterium bifidum BGN4 13069079 YP_006394671.1 CDS BBB_1200 NC_017999.1 1411448 1419058 D COG4646:DNA methylase; methyl transferase type 11 1411448..1419058 Bifidobacterium bifidum BGN4 13069080 YP_006394672.1 CDS BBB_1201 NC_017999.1 1419134 1419439 D hypothetical protein 1419134..1419439 Bifidobacterium bifidum BGN4 13069081 YP_006394673.1 CDS BBB_1202 NC_017999.1 1419436 1419756 D hypothetical protein 1419436..1419756 Bifidobacterium bifidum BGN4 13069082 YP_006394674.1 CDS virD NC_017999.1 1421467 1421601 D COG3505:Type IV secretory pathway, VirD4 components; VirD 1421467..1421601 Bifidobacterium bifidum BGN4 13069083 YP_006394675.1 CDS BBB_1204 NC_017999.1 1421598 1422080 D hypothetical protein 1421598..1422080 Bifidobacterium bifidum BGN4 13069084 YP_006394676.1 CDS BBB_1205 NC_017999.1 1422178 1423137 R COG0338:Site-specific DNA methylase; putative DNA methyl transferase complement(1422178..1423137) Bifidobacterium bifidum BGN4 13069085 YP_006394677.1 CDS BBB_1206 NC_017999.1 1423186 1424586 R hypothetical protein complement(1423186..1424586) Bifidobacterium bifidum BGN4 13069086 YP_006394678.1 CDS BBB_1207 NC_017999.1 1424972 1426477 R molecular chaperone complement(1424972..1426477) Bifidobacterium bifidum BGN4 13069087 YP_006394679.1 CDS BBB_1208 NC_017999.1 1426474 1427016 R hypothetical protein complement(1426474..1427016) Bifidobacterium bifidum BGN4 13069088 YP_006394680.1 CDS BBB_1209 NC_017999.1 1427036 1428760 R COG0741:Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasindom; putative secreted transglycosylase complement(1427036..1428760) Bifidobacterium bifidum BGN4 13069089 YP_006394681.1 CDS trsE NC_017999.1 1428765 1431161 R COG3451:Type IV secretory pathway, VirB4 components; transfer complex protein complement(1428765..1431161) Bifidobacterium bifidum BGN4 13069090 YP_006394682.1 CDS BBB_1211 NC_017999.1 1431165 1431515 R hypothetical protein complement(1431165..1431515) Bifidobacterium bifidum BGN4 13069091 YP_006394683.1 CDS BBB_1212 NC_017999.1 1431550 1432395 R hypothetical protein complement(1431550..1432395) Bifidobacterium bifidum BGN4 13069092 YP_006394684.1 CDS BBB_1213 NC_017999.1 1432410 1432643 R hypothetical protein complement(1432410..1432643) Bifidobacterium bifidum BGN4 13069093 YP_006394685.1 CDS asa NC_017999.1 1432889 1438405 R aggregation substance complement(1432889..1438405) Bifidobacterium bifidum BGN4 13069094 YP_006394686.1 CDS BBB_1215 NC_017999.1 1438512 1439435 R colicin uptake related membrane protein complement(1438512..1439435) Bifidobacterium bifidum BGN4 13069095 YP_006394687.1 CDS BBB_1216 NC_017999.1 1439464 1439700 R hypothetical protein complement(1439464..1439700) Bifidobacterium bifidum BGN4 13069096 YP_006394688.1 CDS BBB_1217 NC_017999.1 1439779 1440501 R hypothetical protein complement(1439779..1440501) Bifidobacterium bifidum BGN4 13069097 YP_006394689.1 CDS BBB_1218 NC_017999.1 1440619 1440954 D hypothetical protein 1440619..1440954 Bifidobacterium bifidum BGN4 13069098 YP_006394690.1 CDS BBB_1219 NC_017999.1 1441221 1441436 R hypothetical protein complement(1441221..1441436) Bifidobacterium bifidum BGN4 13069099 YP_006394691.1 CDS BBB_1220 NC_017999.1 1441632 1441823 D hypothetical protein 1441632..1441823 Bifidobacterium bifidum BGN4 13069100 YP_006394692.1 CDS fic NC_017999.1 1441826 1442593 D COG2184: protein involved in cell division; cell filamentation protein 1441826..1442593 Bifidobacterium bifidum BGN4 13069101 YP_006394693.1 CDS xerC NC_017999.1 1442741 1444069 R COG0582:Integrase; putative tyrosine recombinase complement(1442741..1444069) Bifidobacterium bifidum BGN4 13069102 YP_006394694.1 CDS BBB_1223 NC_017999.1 1444228 1445322 D hypothetical protein 1444228..1445322 Bifidobacterium bifidum BGN4 13069103 YP_006394695.1 CDS BBB_1224 NC_017999.1 1445694 1445990 D COG3077:DNA-damage-inducible protein J; DNA-damage-inducible protein J 1445694..1445990 Bifidobacterium bifidum BGN4 13069104 YP_006394696.1 CDS BBB_1225 NC_017999.1 1445968 1446213 D hypothetical protein 1445968..1446213 Bifidobacterium bifidum BGN4 13069105 YP_006394697.1 CDS BBB_1226 NC_017999.1 1447359 1448447 D hypothetical protein 1447359..1448447 Bifidobacterium bifidum BGN4 13069106 YP_006394698.1 CDS BBB_1227 NC_017999.1 1449022 1449255 R hypothetical protein complement(1449022..1449255) Bifidobacterium bifidum BGN4 13069107 YP_006394699.1 CDS relA NC_017999.1 1450079 1452409 R COG0317:Guanosine polyphosphatepyrophosphohydrolases/synthetases; GTP pyrophosphokinase complement(1450079..1452409) Bifidobacterium bifidum BGN4 13069108 YP_006394700.1 CDS dut NC_017999.1 1452559 1453035 R COG0756:dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(1452559..1453035) Bifidobacterium bifidum BGN4 13069109 YP_006394701.1 CDS BBB_1230 NC_017999.1 1453035 1453328 R hypothetical protein complement(1453035..1453328) Bifidobacterium bifidum BGN4 13069110 YP_006394702.1 CDS BBB_1231 NC_017999.1 1453478 1454533 D putative DNA-binding protein 1453478..1454533 Bifidobacterium bifidum BGN4 13069111 YP_006394703.1 CDS BBB_1232 NC_017999.1 1454651 1455853 R COG1524:Uncharacterized proteins of the APsuperfamily; type I phosphodiesterase/nucleotidepyrophosphatase complement(1454651..1455853) Bifidobacterium bifidum BGN4 13069112 YP_006394704.1 CDS gyrA NC_017999.1 1456032 1458704 D COG0188:Type IIA topoisomerase (DNA gyrase/topoII, topoisomerase IV), A subunit; DNA gyrase subunit A 1456032..1458704 Bifidobacterium bifidum BGN4 13069113 YP_006394705.1 CDS lhr NC_017999.1 1458932 1463578 R COG1201:Lhr-like helicases; putative ATP-dependent helicase complement(1458932..1463578) Bifidobacterium bifidum BGN4 13069114 YP_006394706.1 CDS BBB_1235 NC_017999.1 1463636 1463842 R COG3655:Predicted transcriptional regulator; transcriptional regulator complement(1463636..1463842) Bifidobacterium bifidum BGN4 13069115 YP_006394707.1 CDS BBB_1236 NC_017999.1 1463844 1464167 R putative transporter protein complement(1463844..1464167) Bifidobacterium bifidum BGN4 13069116 YP_006394708.1 CDS aspA NC_017999.1 1464383 1465822 D COG1027:Aspartate ammonia-lyase; aspartate ammonia-lyase 1464383..1465822 Bifidobacterium bifidum BGN4 13069117 YP_006394709.1 CDS gyrB NC_017999.1 1465903 1468215 R COG0187:Type IIA topoisomerase (DNA gyrase/topoII, topoisomerase IV), B subunit; DNA gyrase subunit B complement(1465903..1468215) Bifidobacterium bifidum BGN4 13069118 YP_006394710.1 CDS hrdB NC_017999.1 1468347 1469849 R COG0568:DNA-directed RNA polymerase, sigma subunit(sigma70/sigma32); RNA polymerase principal sigma factor complement(1468347..1469849) Bifidobacterium bifidum BGN4 13069119 YP_006394711.1 CDS BBB_1240 NC_017999.1 1470024 1470695 R hypothetical protein complement(1470024..1470695) Bifidobacterium bifidum BGN4 13069120 YP_006394712.1 CDS idsA NC_017999.1 1470893 1471990 D COG0142:Geranylgeranyl pyrophosphate synthase; bifunctional short chain isoprenyl diphosphate synthase 1470893..1471990 Bifidobacterium bifidum BGN4 13069121 YP_006394713.1 CDS pknA NC_017999.1 1472097 1474196 D COG0515:Serine/threonine protein kinase; putative serine/threonine- protein kinase 1472097..1474196 Bifidobacterium bifidum BGN4 13069122 YP_006394714.1 CDS plsC NC_017999.1 1474294 1475010 R COG0204:1-acyl-sn-glycerol-3-phosphateacyl transferase; 1-acyl-sn-glycerol-3-phosphate acyl transferase complement(1474294..1475010) Bifidobacterium bifidum BGN4 13069123 YP_006394715.1 CDS BBB_1244 NC_017999.1 1475059 1475658 D hypothetical protein 1475059..1475658 Bifidobacterium bifidum BGN4 13069124 YP_006394716.1 CDS trpD NC_017999.1 1475697 1476743 R COG0547:Anthranilate phosphoribosyl transferase; anthranilate phosphoribosyltransferase complement(1475697..1476743) Bifidobacterium bifidum BGN4 13069125 YP_006394717.1 CDS secA NC_017999.1 1477434 1480316 R COG0653:Pre protein translocase subunit SecA(ATPase, RNA helicase); pre protein translocase, SecA subunit complement(1477434..1480316) Bifidobacterium bifidum BGN4 13069126 YP_006394718.1 CDS BBB_1247 NC_017999.1 1480528 1481193 R COG1544:Ribosome-associated protein Y (PSrp-1); ribosome-associated factor Y complement(1480528..1481193) Bifidobacterium bifidum BGN4 13069127 YP_006394719.1 CDS BBB_1248 NC_017999.1 1481381 1481578 D hypothetical protein 1481381..1481578 Bifidobacterium bifidum BGN4 13069128 YP_006394720.1 CDS recX NC_017999.1 1482548 1483036 R COG2137:Uncharacterized protein conserved inbacteria; regulatory protein complement(1482548..1483036) Bifidobacterium bifidum BGN4 13069129 YP_006394721.1 CDS recA NC_017999.1 1483165 1484355 R COG0468:RecA/RadA recombinase; recombinase A complement(1483165..1484355) Bifidobacterium bifidum BGN4 13069130 YP_006394722.1 CDS BBB_1251 NC_017999.1 1484625 1484858 R hypothetical protein complement(1484625..1484858) Bifidobacterium bifidum BGN4 13069131 YP_006394723.1 CDS BBB_1252 NC_017999.1 1485030 1485533 R COG1396:Predicted transcriptional regulators; transcriptional regulator complement(1485030..1485533) Bifidobacterium bifidum BGN4 13069886 YP_006394724.1 CDS cinA NC_017999.1 1485603 1486148 R COG1546:Uncharacterized protein (competence- andmitomycin-induced); putative nucleotide-utilizing enzyme complement(1485603..1486148) Bifidobacterium bifidum BGN4 13069887 YP_006394725.1 CDS pgsA NC_017999.1 1486220 1486891 R COG0558:Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate3- phosphatidyl transferase complement(1486220..1486891) Bifidobacterium bifidum BGN4 13069888 YP_006394726.1 CDS ftsK NC_017999.1 1487018 1489996 R COG1674:DNA segregation ATPase FtsK/SpoIIIE and related proteins; DNA translocase complement(1487018..1489996) Bifidobacterium bifidum BGN4 13069889 YP_006394727.1 CDS fic NC_017999.1 1490075 1490878 D COG2184: protein involved in cell division; cell filamentation protein 1490075..1490878 Bifidobacterium bifidum BGN4 13069890 YP_006394728.1 CDS miaA NC_017999.1 1490944 1491924 R COG0324:tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1490944..1491924) Bifidobacterium bifidum BGN4 13069891 YP_006394729.1 CDS BBB_1258 NC_017999.1 1492096 1493550 R COG0621:2-methylthioadenine synthetase; hypothetical protein complement(1492096..1493550) Bifidobacterium bifidum BGN4 13069892 YP_006394730.1 CDS BBB_1259 NC_017999.1 1493706 1494368 D COG2357:Uncharacterized protein conserved inbacteria; RelA/SpoT domain containing protein 1493706..1494368 Bifidobacterium bifidum BGN4 13069893 YP_006394731.1 CDS BBB_1260 NC_017999.1 1494489 1495451 R COG0697:Permeases of the drug/metabolite transporter (DMT) superfamily; putative transporter complement(1494489..1495451) Bifidobacterium bifidum BGN4 13069894 YP_006394732.1 CDS BBB_1261 NC_017999.1 1495482 1495595 R hypothetical protein complement(1495482..1495595) Bifidobacterium bifidum BGN4 13069895 YP_006394733.1 CDS ybhL NC_017999.1 1495662 1496495 R COG0670:Integral membrane protein, interacts withFtsH; inner membrane protein complement(1495662..1496495) Bifidobacterium bifidum BGN4 13069896 YP_006394734.1 CDS BBB_1263 NC_017999.1 1496598 1497416 R integral membrane protein complement(1496598..1497416) Bifidobacterium bifidum BGN4 13069897 YP_006394735.1 CDS BBB_1264 NC_017999.1 1497582 1499021 D atypical histidine kinase sensor oftwo- component system 1497582..1499021 Bifidobacterium bifidum BGN4 13069898 YP_006394736.1 CDS BBB_1265 NC_017999.1 1499018 1499689 D COG2197:Response regulator containing a CheY-likereceiver domain and an HTH DNA-binding domain; response regulator of two- component system 1499018..1499689 Bifidobacterium bifidum BGN4 13069899 YP_006394737.1 CDS BBB_1266 NC_017999.1 1499776 1501881 D COG1479:Uncharacterized conserved protein; hypothetical protein 1499776..1501881 Bifidobacterium bifidum BGN4 13069900 YP_006394738.1 CDS gmk NC_017999.1 1502125 1503708 R COG0194:Guanylate kinase; guanylate kinase complement(1502125..1503708) Bifidobacterium bifidum BGN4 13069901 YP_006394739.1 CDS carB NC_017999.1 1503727 1507107 R COG0458:Carbamoylphosphate synthase large subunit(split gene in MJ); carbamoyl-phosphate synthase large subunit complement(1503727..1507107) Bifidobacterium bifidum BGN4 13069902 YP_006394740.1 CDS carA NC_017999.1 1507100 1508317 R COG0505:Carbamoylphosphate synthase small subunit; carbamoyl-phosphate synthase small subunit complement(1507100..1508317) Bifidobacterium bifidum BGN4 13069903 YP_006394741.1 CDS nusB NC_017999.1 1508405 1509076 R COG0781:Transcription termination factor; transcription antitermination factor complement(1508405..1509076) Bifidobacterium bifidum BGN4 13069904 YP_006394742.1 CDS efp NC_017999.1 1509098 1509661 R COG0231:Translation elongation factor P(EF-P)/translation initiation factor 5A (eIF-5A); translation elongation factor P complement(1509098..1509661) Bifidobacterium bifidum BGN4 13069905 YP_006394743.1 CDS BBB_1272 NC_017999.1 1510681 1511991 D COG0477:Permeases of the major facilitatorsuperfamily; hypothetical protein 1510681..1511991 Bifidobacterium bifidum BGN4 13069906 YP_006394744.1 CDS BBB_1273 NC_017999.1 1511992 1514481 R COG4222:Uncharacterized protein conserved inbacteria; putative lipo protein complement(1511992..1514481) Bifidobacterium bifidum BGN4 13069907 YP_006394745.1 CDS tuf NC_017999.1 1514727 1515926 R COG0050:GTPases - translation elongation factors; translation elongation factor Tu complement(1514727..1515926) Bifidobacterium bifidum BGN4 13069908 YP_006394746.1 CDS fusA NC_017999.1 1516100 1518229 R COG0480:Translation elongation factors (GTPases); translation elongation factor G complement(1516100..1518229) Bifidobacterium bifidum BGN4 13069909 YP_006394747.1 CDS rpsG NC_017999.1 1518257 1518727 R COG0049:Ribosomal protein S7; 30S ribosomal protein S7 complement(1518257..1518727) Bifidobacterium bifidum BGN4 13069910 YP_006394748.1 CDS rpsL NC_017999.1 1518733 1519104 R COG0048:Ribosomal protein S12; 30S ribosomal protein S12 complement(1518733..1519104) Bifidobacterium bifidum BGN4 13069911 YP_006394749.1 CDS ltaE NC_017999.1 1520321 1521346 D COG2008:Threonine aldolase; low specificity L-threonine aldolase 1520321..1521346 Bifidobacterium bifidum BGN4 13069913 YP_006394750.1 CDS rfaG NC_017999.1 1521371 1522561 R COG0438:Glycosyl transferase; putative glycosyl transferase complement(1521371..1522561) Bifidobacterium bifidum BGN4 13069914 YP_006394751.1 CDS BBB_1280 NC_017999.1 1522900 1526754 R exo-alpha-galactosidase complement(1522900..1526754) Bifidobacterium bifidum BGN4 13069915 YP_006394752.1 CDS purT NC_017999.1 1527031 1528311 D COG0027:Formate-dependent phosphoribosylglycinamideformyl transferase (GAR transformylase); putative phosphoribosylglycinamideformyl transferase 1527031..1528311 Bifidobacterium bifidum BGN4 13069916 YP_006394753.1 CDS purC NC_017999.1 1528629 1529381 D COG0152:Phosphoribosylaminoimidazolesuccinocarboxam ide (SAICAR) synthase; phosphoribosylaminoimidazole succinocarboxamide synthase 1528629..1529381 Bifidobacterium bifidum BGN4 13069917 YP_006394754.1 CDS BBB_1283 NC_017999.1 1529589 1533335 D COG0046:Phosphoribosylformylglycinamidine (FGAM)synthase, synthetase domain; phosphoribosylformylglycinamidine synthase 1529589..1533335 Bifidobacterium bifidum BGN4 13069918 YP_006394755.1 CDS BBB_1284 NC_017999.1 1533442 1534104 R hypothetical protein complement(1533442..1534104) Bifidobacterium bifidum BGN4 13069919 YP_006394756.1 CDS BBB_1285 NC_017999.1 1534205 1534843 R hypothetical protein complement(1534205..1534843) Bifidobacterium bifidum BGN4 13069920 YP_006394757.1 CDS mug NC_017999.1 1535479 1536042 D COG3663:G:T/U mismatch-specific DNA glycosylase; T/U mismatch-specific DNA glycosylase 1535479..1536042 Bifidobacterium bifidum BGN4 13069921 YP_006394758.1 CDS BBB_1287 NC_017999.1 1536020 1536148 D hypothetical protein 1536020..1536148 Bifidobacterium bifidum BGN4 13069922 YP_006394759.1 CDS fhuR NC_017999.1 1536102 1536314 D putative LysR-type transcriptional regulator 1536102..1536314 Bifidobacterium bifidum BGN4 13069923 YP_006394760.1 CDS BBB_1289 NC_017999.1 1536603 1536980 R COG0346:Lactoylglutathione lyase and relatedlyases; glyoxalase complement(1536603..1536980) Bifidobacterium bifidum BGN4 13069924 YP_006394761.1 CDS BBB_1290 NC_017999.1 1537073 1537291 R hypothetical protein complement(1537073..1537291) Bifidobacterium bifidum BGN4 13069925 YP_006394762.1 CDS dinB NC_017999.1 1537336 1538979 R COG0389:Nucleotidyl transferase/DNA polymeraseinvolved in DNA repair; DNA polymerase IV complement(1537336..1538979) Bifidobacterium bifidum BGN4 13069926 YP_006394763.1 CDS purF NC_017999.1 1539108 1540616 D COG0034:Glutamine phosphoribosylpyrophosphateamido transferase; amidophosphoribosyl transferase 1539108..1540616 Bifidobacterium bifidum BGN4 13069927 YP_006394764.1 CDS purM NC_017999.1 1540689 1541726 D COG0150:Phosphoribosylaminoimidazole (AIR)synthetase; phosphoribosylformylglycinamidine cyclo-ligase 1540689..1541726 Bifidobacterium bifidum BGN4 13069928 YP_006394765.1 CDS purD NC_017999.1 1541857 1543122 D COG0151:Phosphoribosylamine-glycine ligase; phosphoribosylamine--glycine ligase 1541857..1543122 Bifidobacterium bifidum BGN4 13069929 YP_006394766.1 CDS cgmA NC_017999.1 1543298 1545514 R COG1368:Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; putative cyclic beta-1, 2-glucan modification protein complement(1543298..1545514) Bifidobacterium bifidum BGN4 13069930 YP_006394767.1 CDS BBB_1296 NC_017999.1 1545833 1547212 D COG0627:Predicted esterase; putative esterase 1545833..1547212 Bifidobacterium bifidum BGN4 13069931 YP_006394768.1 CDS BBB_1297 NC_017999.1 1547209 1549827 D COG2898:Uncharacterized conserved protein; lysyl-tRNA synthetase 1547209..1549827 Bifidobacterium bifidum BGN4 13069932 YP_006394769.1 CDS mntA NC_017999.1 1550500 1551408 R COG0803:ABC-type metal ion transportsystem, periplasmic component/surface adhesin; manganese-binding lipo protein complement(1550500..1551408) Bifidobacterium bifidum BGN4 13069933 YP_006394770.1 CDS BBB_1299 NC_017999.1 1551529 1552296 R hypothetical protein complement(1551529..1552296) Bifidobacterium bifidum BGN4 13069934 YP_006394771.1 CDS rpmB NC_017999.1 1552346 1552642 D COG0227:Ribosomal protein L28; 50S ribosomal protein L28 1552346..1552642 Bifidobacterium bifidum BGN4 13069935 YP_006394772.1 CDS rpsN NC_017999.1 1552719 1553024 D COG0199:Ribosomal protein S14; 30S ribosomal protein S14 1552719..1553024 Bifidobacterium bifidum BGN4 13069936 YP_006394773.1 CDS rpmE NC_017999.1 1553071 1553328 D COG0254:Ribosomal protein L31; 50S ribosomal protein L31 1553071..1553328 Bifidobacterium bifidum BGN4 13069937 YP_006394774.1 CDS rpmJ NC_017999.1 1553521 1553643 D COG0257:Ribosomal protein L36; 50S ribosomal protein L36 1553521..1553643 Bifidobacterium bifidum BGN4 13069938 YP_006394775.1 CDS rpmF NC_017999.1 1553643 1553813 D 50S ribosomal protein L32 1553643..1553813 Bifidobacterium bifidum BGN4 13069939 YP_006394776.1 CDS BBB_1305 NC_017999.1 1553894 1555144 D COG0701:Predicted permeases; hypothetical protein 1553894..1555144 Bifidobacterium bifidum BGN4 13069940 YP_006394777.1 CDS BBB_1306 NC_017999.1 1555149 1555949 D COG3689:Predicted membrane protein; hypothetical protein 1555149..1555949 Bifidobacterium bifidum BGN4 13069941 YP_006394778.1 CDS BBB_1307 NC_017999.1 1555946 1556215 D hypothetical protein 1555946..1556215 Bifidobacterium bifidum BGN4 13069942 YP_006394779.1 CDS zurR NC_017999.1 1556373 1556768 R COG0735:Fe2+/Zn2+ uptake regulation proteins; transcriptional regulator complement(1556373..1556768) Bifidobacterium bifidum BGN4 13069943 YP_006394780.1 CDS purK NC_017999.1 1556920 1558089 R COG0026:Phosphoribosylaminoimidazole carboxylase(NCAIR synthetase); phosphoribosylaminoimidazole carboxylase ATPase subunit complement(1556920..1558089) Bifidobacterium bifidum BGN4 13069944 YP_006394781.1 CDS purE NC_017999.1 1558073 1558570 R COG0041:Phosphoribosylcarboxyaminoimidazole (NCAIR)mutase; phosphoribosylaminoimidazole carboxylasecatalytic subunit complement(1558073..1558570) Bifidobacterium bifidum BGN4 13069945 YP_006394782.1 CDS cryZ NC_017999.1 1558614 1559603 R COG0604:NADPH:quinone reductase and relatedZn-dependent oxidoreductases; zeta-crystallin complement(1558614..1559603) Bifidobacterium bifidum BGN4 13069946 YP_006394783.1 CDS dxs NC_017999.1 1559859 1561823 D COG1154:Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 1559859..1561823 Bifidobacterium bifidum BGN4 13069947 YP_006394784.1 CDS BBB_1313 NC_017999.1 1562172 1562456 R COG1355:Predicted dioxygenase; hypothetical protein complement(1562172..1562456) Bifidobacterium bifidum BGN4 13069949 YP_006394785.1 CDS BBB_1314 NC_017999.1 1562803 1564083 D COG2865:Predicted transcriptional regulatorcontaining an HTH domain and an uncharacterized domainshared wi; transcriptional regulator 1562803..1564083 Bifidobacterium bifidum BGN4 13069950 YP_006394786.1 CDS rpiR NC_017999.1 1564214 1565083 D COG1737:Transcriptional regulators; transcriptional regulator 1564214..1565083 Bifidobacterium bifidum BGN4 13069951 YP_006394787.1 CDS dnaG NC_017999.1 1565427 1567526 R COG0358:DNA primase (bacterial type); DNA primase complement(1565427..1567526) Bifidobacterium bifidum BGN4 13069952 YP_006394788.1 CDS dgt NC_017999.1 1567572 1568936 R COG0232:dGTP triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase complement(1567572..1568936) Bifidobacterium bifidum BGN4 13069953 YP_006394789.1 CDS alr NC_017999.1 1568967 1570325 R COG0787:Alanine racemase; alanine racemase complement(1568967..1570325) Bifidobacterium bifidum BGN4 13069954 YP_006394790.1 CDS potE NC_017999.1 1570560 1571987 D COG0531:Amino acid transporters; amino acid transporter 1570560..1571987 Bifidobacterium bifidum BGN4 13069955 YP_006394791.1 CDS wecD NC_017999.1 1572157 1572684 R COG0454:Histone acetyl transferase HPA2 and relatedacetyl transferases; putative acetyl transferase complement(1572157..1572684) Bifidobacterium bifidum BGN4 13069956 YP_006394792.1 CDS luxS NC_017999.1 1572874 1573359 R COG1854:LuxS protein involved in autoinducer AI2synthesis; S-ribosylhomocysteine lyase complement(1572874..1573359) Bifidobacterium bifidum BGN4 13069957 YP_006394793.1 CDS recQ NC_017999.1 1573528 1575528 R COG0514:Superfamily II DNA helicase; ATP-dependent DNA helicase complement(1573528..1575528) Bifidobacterium bifidum BGN4 13069958 YP_006394794.1 CDS metB NC_017999.1 1575715 1576902 R COG0626:Cystathionine beta-lyases/cystathioninegamma-synthases; cystathionine gamma-synthase complement(1575715..1576902) Bifidobacterium bifidum BGN4 13069959 YP_006394795.1 CDS cysB NC_017999.1 1577004 1578188 R COG0031:Cysteine synthase; cystathionine beta-synthase complement(1577004..1578188) Bifidobacterium bifidum BGN4 13069960 YP_006394796.1 CDS BBB_1325 NC_017999.1 1578180 1578296 D hypothetical protein 1578180..1578296 Bifidobacterium bifidum BGN4 13069961 YP_006394797.1 CDS BBB_1326 NC_017999.1 1578439 1578846 R hypothetical protein complement(1578439..1578846) Bifidobacterium bifidum BGN4 13069962 YP_006394798.1 CDS serA NC_017999.1 1585630 1586631 D COG0111:Phosphoglycerate dehydrogenase and relateddehydrogenases; D-3-phosphoglycerate dehydrogenase 1585630..1586631 Bifidobacterium bifidum BGN4 13069966 YP_006394799.1 CDS oppF NC_017999.1 1586668 1587486 R COG1123:ATPase components of various ABC-typetransport systems, contain duplicated ATPase; oligopeptide transport ATP-binding protein complement(1586668..1587486) Bifidobacterium bifidum BGN4 13069967 YP_006394800.1 CDS oppF NC_017999.1 1587525 1588325 R COG1123:ATPase components of various ABC-typetransport systems, contain duplicated ATPase; oligopeptide transport ATP-binding protein complement(1587525..1588325) Bifidobacterium bifidum BGN4 13069968 YP_006394801.1 CDS BBB_1330 NC_017999.1 1588322 1589281 R COG1173:ABC-type dipeptide/oligopeptide/nickeltransport systems, permease components; ABC-type dipeptide/oligopeptide/nickel transportsystems permease component complement(1588322..1589281) Bifidobacterium bifidum BGN4 13069969 YP_006394802.1 CDS gsiC NC_017999.1 1589278 1590255 R COG0601:ABC-type dipeptide/oligopeptide/nickeltransport systems, permease components; glutathione transport system permease complement(1589278..1590255) Bifidobacterium bifidum BGN4 13069970 YP_006394803.1 CDS gsiB NC_017999.1 1590353 1592023 R COG0747:ABC-type dipeptide transportsystem, periplasmic component; glutathione-binding protein complement(1590353..1592023) Bifidobacterium bifidum BGN4 13069971 YP_006394804.1 CDS coaX NC_017999.1 1592202 1592972 D COG1521:Putative transcriptional regulator, homologof Bvg accessory factor; type III pantothenate kinase 1592202..1592972 Bifidobacterium bifidum BGN4 13069972 YP_006394805.1 CDS araN NC_017999.1 1593034 1594455 R COG1653:ABC-type sugar transport system, periplasmic component; putative arabinose-binding protein complement(1593034..1594455) Bifidobacterium bifidum BGN4 13069973 YP_006394806.1 CDS BBB_1335 NC_017999.1 1594598 1594981 R putative solute binding protein complement(1594598..1594981) Bifidobacterium bifidum BGN4 13069974 YP_006394807.1 CDS BBB_1336 NC_017999.1 1594995 1595153 D hypothetical protein 1594995..1595153 Bifidobacterium bifidum BGN4 13069975 YP_006394808.1 CDS bgaB NC_017999.1 1595246 1597315 R COG1874:Beta-galactosidase; beta-galactosidase complement(1595246..1597315) Bifidobacterium bifidum BGN4 13069976 YP_006394809.1 CDS araQ NC_017999.1 1597555 1598244 R COG0395:ABC-type sugar transport system, permease component; L-arabinose transport system permease complement(1597555..1598244) Bifidobacterium bifidum BGN4 13069977 YP_006394810.1 CDS lacI NC_017999.1 1598477 1599490 D COG1609:Transcriptional regulators; lactose operon repressor 1598477..1599490 Bifidobacterium bifidum BGN4 13069978 YP_006394811.1 CDS serA NC_017999.1 1599555 1599827 R COG0111:Phosphoglycerate dehydrogenase and relateddehydrogenases; D-isomer specific 2-hydroxyacid dehydrogenase complement(1599555..1599827) Bifidobacterium bifidum BGN4 13069979 YP_006394812.1 CDS BBB_1341 NC_017999.1 1599935 1604416 R COG3669:Alpha-L-fucosidase; alpha-L-fucosidase complement(1599935..1604416) Bifidobacterium bifidum BGN4 13069980 YP_006394813.1 CDS BBB_1342 NC_017999.1 1604612 1604782 R hypothetical protein complement(1604612..1604782) Bifidobacterium bifidum BGN4 13069981 YP_006394814.1 CDS ileS NC_017999.1 1604924 1608250 R COG0060:Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(1604924..1608250) Bifidobacterium bifidum BGN4 13069982 YP_006394815.1 CDS BBB_1344 NC_017999.1 1608294 1608452 R hypothetical protein complement(1608294..1608452) Bifidobacterium bifidum BGN4 13069983 YP_006394816.1 CDS BBB_1345 NC_017999.1 1608791 1609156 R COG1950:Predicted membrane protein; hypothetical protein complement(1608791..1609156) Bifidobacterium bifidum BGN4 13069984 YP_006394817.1 CDS aldH NC_017999.1 1609422 1610867 D COG1012:NAD-dependent aldehyde dehydrogenases; fatty aldehyde dehydrogenase 1609422..1610867 Bifidobacterium bifidum BGN4 13069985 YP_006394818.1 CDS hflC NC_017999.1 1611125 1612024 R COG0330:Membrane protease subunits, stomatin/prohibitin homologs; membrane protease complement(1611125..1612024) Bifidobacterium bifidum BGN4 13069986 YP_006394819.1 CDS cysD NC_017999.1 1612208 1613503 R COG2873:O-acetylhomoserine sulfhydrylase; O-acetylhomoserine (thiol)-lyase complement(1612208..1613503) Bifidobacterium bifidum BGN4 13069987 YP_006394820.1 CDS BBB_1349 NC_017999.1 1613474 1613629 D hypothetical protein 1613474..1613629 Bifidobacterium bifidum BGN4 13069988 YP_006394821.1 CDS metC NC_017999.1 1613648 1614877 R COG0626:Cystathionine beta-lyases/cystathioninegamma-synthases; cystathionine beta-lyase complement(1613648..1614877) Bifidobacterium bifidum BGN4 13069989 YP_006394822.1 CDS BBB_1351 NC_017999.1 1615120 1615239 D hypothetical protein 1615120..1615239 Bifidobacterium bifidum BGN4 13069990 YP_006394823.1 CDS nox NC_017999.1 1615289 1616677 D COG0446:Uncharacterized NAD(FAD)-dependentdehydrogenases; NADH oxidase 1615289..1616677 Bifidobacterium bifidum BGN4 13069991 YP_006394824.1 CDS glxK NC_017999.1 1616760 1617986 R COG1929:Glycerate kinase; glycerate kinase complement(1616760..1617986) Bifidobacterium bifidum BGN4 13069992 YP_006394825.1 CDS macB NC_017999.1 1618003 1620810 R COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; macrolide export ATP-binding/permease complement(1618003..1620810) Bifidobacterium bifidum BGN4 13069993 YP_006394826.1 CDS exp NC_017999.1 1621011 1623479 D COG0474:Cation transport ATPase; putative cation-transporting ATPase 1621011..1623479 Bifidobacterium bifidum BGN4 13069994 YP_006394827.1 CDS BBB_1356 NC_017999.1 1623519 1623992 R MerR family transcriptional regulator complement(1623519..1623992) Bifidobacterium bifidum BGN4 13069995 YP_006394828.1 CDS BBB_1357 NC_017999.1 1623991 1624998 D COG0667:Predicted oxidoreductases ( related toaryl-alcohol dehydrogenases); putative reductase 1623991..1624998 Bifidobacterium bifidum BGN4 13069996 YP_006394829.1 CDS polC NC_017999.1 1625338 1625880 D COG2176:DNA polymerase III, alpha subunit(gram-positive type); DNA polymerase III polC-type 1625338..1625880 Bifidobacterium bifidum BGN4 13069997 YP_006394830.1 CDS gltA NC_017999.1 1625978 1627270 R COG0372:Citrate synthase; citrate (Si)-synthase complement(1625978..1627270) Bifidobacterium bifidum BGN4 13069998 YP_006394831.1 CDS map NC_017999.1 1627481 1628257 R COG0024:Methionine aminopeptidase; methionine aminopeptidase complement(1627481..1628257) Bifidobacterium bifidum BGN4 13069999 YP_006394832.1 CDS BBB_1361 NC_017999.1 1628282 1629187 R COG3247:Uncharacterized conserved protein; hypothetical protein complement(1628282..1629187) Bifidobacterium bifidum BGN4 13070000 YP_006394833.1 CDS pepO NC_017999.1 1629416 1631497 D COG3590:Predicted metalloendopeptidase; neutral endopeptidase 1629416..1631497 Bifidobacterium bifidum BGN4 13070001 YP_006394834.1 CDS ssb NC_017999.1 1631546 1632211 R COG0629:Single-stranded DNA-binding protein; single-stranded DNA-binding protein complement(1631546..1632211) Bifidobacterium bifidum BGN4 13070002 YP_006394835.1 CDS BBB_1364 NC_017999.1 1632464 1633405 D hypothetical protein 1632464..1633405 Bifidobacterium bifidum BGN4 13070003 YP_006394836.1 CDS proS NC_017999.1 1633562 1635382 R COG0442:Prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(1633562..1635382) Bifidobacterium bifidum BGN4 13070004 YP_006394837.1 CDS BBB_1366 NC_017999.1 1635354 1635473 D hypothetical protein 1635354..1635473 Bifidobacterium bifidum BGN4 13070005 YP_006394838.1 CDS BBB_1367 NC_017999.1 1635514 1635909 D hypothetical protein 1635514..1635909 Bifidobacterium bifidum BGN4 13070006 YP_006394839.1 CDS recD NC_017999.1 1636019 1637431 R COG0507:ATP-dependent exoDNAse (exonucleaseV), alpha subunit - helicase superfamily I member; ATP-dependent exoDNAse subunit alpha complement(1636019..1637431) Bifidobacterium bifidum BGN4 13070007 YP_006394840.1 CDS BBB_1369 NC_017999.1 1637503 1638288 R COG0561:Predicted hydrolases of the HADsuperfamily; putative hydrolase complement(1637503..1638288) Bifidobacterium bifidum BGN4 13070008 YP_006394841.1 CDS orn NC_017999.1 1638411 1639061 R COG1949:Oligoribonuclease (3'->5' exoribonuclease); oligoribonuclease complement(1638411..1639061) Bifidobacterium bifidum BGN4 13070009 YP_006394842.1 CDS irlS NC_017999.1 1639131 1639430 R COG0642:Signal transduction histidine kinase; sensor protein complement(1639131..1639430) Bifidobacterium bifidum BGN4 13070010 YP_006394843.1 CDS aglA NC_017999.1 1639779 1641707 D COG0366:Glycosidases; alpha-glucosidase 1639779..1641707 Bifidobacterium bifidum BGN4 13070011 YP_006394844.1 CDS guaB NC_017999.1 1641861 1643405 R COG0516:IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(1641861..1643405) Bifidobacterium bifidum BGN4 13070012 YP_006394845.1 CDS rfe NC_017999.1 1643475 1644656 R COG0472:UDP-N-acetylmuramyl pentapeptidephospho transferase/UDP-N-acetylglucosamine-1-phosphate transferase; putative undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase complement(1643475..1644656) Bifidobacterium bifidum BGN4 13070013 YP_006394846.1 CDS BBB_1375 NC_017999.1 1644653 1645342 R COG0009:Putative translation factor (SUA5); translation factor complement(1644653..1645342) Bifidobacterium bifidum BGN4 13070014 YP_006394847.1 CDS maa NC_017999.1 1645551 1646006 D COG0110:Acetyl transferase (isoleucine patchsuperfamily); maltose O-acetyl transferase 1645551..1646006 Bifidobacterium bifidum BGN4 13070015 YP_006394848.1 CDS hemK NC_017999.1 1645949 1646938 R COG2890:Methylase of polypeptide chain releasefactors; protein-(glutamine-N5) methyl transferase complement(1645949..1646938) Bifidobacterium bifidum BGN4 13070016 YP_006394849.1 CDS prfA NC_017999.1 1647203 1648291 R COG0216: protein chain release factor A; peptide chain release factor complement(1647203..1648291) Bifidobacterium bifidum BGN4 13070017 YP_006394850.1 CDS rpmE NC_017999.1 1648437 1648649 R COG0254:Ribosomal protein L31; 50S ribosomal protein L31 complement(1648437..1648649) Bifidobacterium bifidum BGN4 13070018 YP_006394851.1 CDS ykgD NC_017999.1 1648964 1650007 D COG4977:Transcriptional regulator containing anamidase domain and an AraC-type DNA-binding HTH domain; putative HTH-type transcriptional regulator 1648964..1650007 Bifidobacterium bifidum BGN4 13070020 YP_006394852.1 CDS BBB_1381 NC_017999.1 1650307 1651194 D COG4975:Putative glucose uptake permease; putative sugar uptake protein 1650307..1651194 Bifidobacterium bifidum BGN4 13070021 YP_006394853.1 CDS iolG NC_017999.1 1651262 1652287 D COG0673:Predicted dehydrogenases and related proteins; inositol 2-dehydrogenase 1651262..1652287 Bifidobacterium bifidum BGN4 13070022 YP_006394854.1 CDS BBB_1383 NC_017999.1 1652308 1653612 R COG2230:Cyclopropane fatty acid synthase and related methyl transferases; putative methyl transferase complement(1652308..1653612) Bifidobacterium bifidum BGN4 13070023 YP_006394855.1 CDS BBB_1384 NC_017999.1 1653879 1654577 R hypothetical protein complement(1653879..1654577) Bifidobacterium bifidum BGN4 13070024 YP_006394856.1 CDS BBB_1385 NC_017999.1 1655413 1656177 D COG0491:Zn-dependent hydrolases, includingglyoxylases; putative Zn-dependent hydrolase 1655413..1656177 Bifidobacterium bifidum BGN4 13070025 YP_006394857.1 CDS BBB_1386 NC_017999.1 1657095 1657961 D COG0676:Uncharacterized enzymes related to aldose1-epimerase; transglycosylase 1657095..1657961 Bifidobacterium bifidum BGN4 13070026 YP_006394858.1 CDS BBB_1387 NC_017999.1 1658028 1659140 R COG2367:Beta-lactamase class A; penicillin-binding protein complement(1658028..1659140) Bifidobacterium bifidum BGN4 13070027 YP_006394859.1 CDS rhlE NC_017999.1 1659346 1661340 R COG0513:Superfamily II DNA and RNA helicases; putative ATP-dependent RNA helicase complement(1659346..1661340) Bifidobacterium bifidum BGN4 13070028 YP_006394860.1 CDS rhaT NC_017999.1 1661586 1662500 D COG0697:Permeases of the drug/metabolite transporter (DMT) superfamily; Putative permease of the drug/metabolite transporter 1661586..1662500 Bifidobacterium bifidum BGN4 13070029 YP_006394861.1 CDS BBB_1390 NC_017999.1 1662696 1662869 R hypothetical protein complement(1662696..1662869) Bifidobacterium bifidum BGN4 13070030 YP_006394862.1 CDS BBB_1391 NC_017999.1 1662936 1663760 R COG0577:ABC-type antimicrobial peptide transportsystem, permease component; SalY-type ABC antimicrobial peptide transportsystem permease component complement(1662936..1663760) Bifidobacterium bifidum BGN4 13070031 YP_006394863.1 CDS BBB_1392 NC_017999.1 1663879 1664760 R COG0730:Predicted permeases; transporter complement(1663879..1664760) Bifidobacterium bifidum BGN4 13070032 YP_006394864.1 CDS BBB_1393 NC_017999.1 1664891 1665049 R hypothetical protein complement(1664891..1665049) Bifidobacterium bifidum BGN4 13070033 YP_006394865.1 CDS BBB_1394 NC_017999.1 1665117 1665308 R transposase-like protein complement(1665117..1665308) Bifidobacterium bifidum BGN4 13070034 YP_006394866.1 CDS BBB_1395 NC_017999.1 1665364 1666482 R putative hydrolase or acyl transferase complement(1665364..1666482) Bifidobacterium bifidum BGN4 13070035 YP_006394867.1 CDS BBB_1396 NC_017999.1 1666643 1667920 D COG2873:O-acetylhomoserine sulfhydrylase; O-acetylhomoserine (thiol)-lyase 1666643..1667920 Bifidobacterium bifidum BGN4 13070036 YP_006394868.1 CDS BBB_1397 NC_017999.1 1668025 1668129 R aldo/keto reductase complement(1668025..1668129) Bifidobacterium bifidum BGN4 13070037 YP_006394869.1 CDS BBB_1399 NC_017999.1 1668743 1668988 R putative MarR-type transcriptional regulator complement(1668743..1668988) Bifidobacterium bifidum BGN4 13070039 YP_006394870.1 CDS glkA NC_017999.1 1669256 1670206 D COG1940:Transcriptional regulator/sugar kinase; glucokinase 1669256..1670206 Bifidobacterium bifidum BGN4 13070040 YP_006394871.1 CDS expZ NC_017999.1 1671057 1672787 D COG0488:ATPase components of ABC transporters withduplicated ATPase domains; nucleotide-binding protein 1671057..1672787 Bifidobacterium bifidum BGN4 13070041 YP_006394872.1 CDS BBB_1402 NC_017999.1 1672773 1673120 R COG0477:Permeases of the major facilitatorsuperfamily; hypothetical protein complement(1672773..1673120) Bifidobacterium bifidum BGN4 13070042 YP_006394873.1 CDS xynB NC_017999.1 1673415 1674257 D COG0657:Esterase/lipase; endo-1,4-beta-xylanase B 1673415..1674257 Bifidobacterium bifidum BGN4 13070043 YP_006394874.1 CDS BBB_1404 NC_017999.1 1674534 1675157 R COG3467:Predicted flavin-nucleotide-binding protein; nitroimidazole resistance protein complement(1674534..1675157) Bifidobacterium bifidum BGN4 13070044 YP_006394875.1 CDS BBB_1405 NC_017999.1 1675388 1675888 R COG1434:Uncharacterized conserved protein; hypothetical protein complement(1675388..1675888) Bifidobacterium bifidum BGN4 13070046 YP_006394876.1 CDS BBB_1406 NC_017999.1 1675888 1676079 D hypothetical protein 1675888..1676079 Bifidobacterium bifidum BGN4 13070047 YP_006394877.1 CDS BBB_1407 NC_017999.1 1676417 1676551 D COG3817:Predicted membrane protein; membrane protein 1676417..1676551 Bifidobacterium bifidum BGN4 13070048 YP_006394878.1 CDS pcp NC_017999.1 1676592 1677239 D COG2039:Pyrrolidone-carboxylate peptidase(N-terminal pyroglutamyl peptidase); pyroglutamyl-peptidase I 1676592..1677239 Bifidobacterium bifidum BGN4 13070049 YP_006394879.1 CDS BBB_1409 NC_017999.1 1677327 1677524 R hypothetical protein complement(1677327..1677524) Bifidobacterium bifidum BGN4 13070050 YP_006394880.1 CDS BBB_1410 NC_017999.1 1677623 1677754 D hypothetical protein 1677623..1677754 Bifidobacterium bifidum BGN4 13070051 YP_006394881.1 CDS BBB_1411 NC_017999.1 1678508 1679185 D hypothetical protein 1678508..1679185 Bifidobacterium bifidum BGN4 13070052 YP_006394882.1 CDS BBB_1412 NC_017999.1 1679336 1680211 R hypothetical protein complement(1679336..1680211) Bifidobacterium bifidum BGN4 13070053 YP_006394883.1 CDS uup NC_017999.1 1680697 1682376 D COG0488:ATPase components of ABC transporters withduplicated ATPase domains; ABC transporter ATP-binding protein 1680697..1682376 Bifidobacterium bifidum BGN4 13070054 YP_006394884.1 CDS hexa NC_017999.1 1682575 1685916 R COG3525:N-acetyl-beta-hexosaminidase; beta-hexosaminidase A complement(1682575..1685916) Bifidobacterium bifidum BGN4 13070055 YP_006394885.1 CDS tesB NC_017999.1 1686299 1687204 D COG1946:Acyl-CoA thioesterase; acyl-CoA thioesterase 1686299..1687204 Bifidobacterium bifidum BGN4 13070056 YP_006394886.1 CDS BBB_1416 NC_017999.1 1687216 1687641 D hypothetical protein 1687216..1687641 Bifidobacterium bifidum BGN4 13070057 YP_006394887.1 CDS BBB_1417 NC_017999.1 1687729 1688268 R hypothetical protein complement(1687729..1688268) Bifidobacterium bifidum BGN4 13070058 YP_006394888.1 CDS folK NC_017999.1 1688265 1689779 R COG0801:7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(1688265..1689779) Bifidobacterium bifidum BGN4 13070059 YP_006394889.1 CDS folP NC_017999.1 1689862 1690734 R COG0294:Dihydropteroate synthase and relatedenzymes; dihydropteroate synthase complement(1689862..1690734) Bifidobacterium bifidum BGN4 13070060 YP_006394890.1 CDS folE NC_017999.1 1690800 1691366 R COG0302:GTP cyclohydrolase I; GTP cyclohydrolase I complement(1690800..1691366) Bifidobacterium bifidum BGN4 13070061 YP_006394891.1 CDS ftsH NC_017999.1 1691507 1693600 R COG0465:ATP-dependent Zn proteases; cell division protease complement(1691507..1693600) Bifidobacterium bifidum BGN4 13070062 YP_006394892.1 CDS hpt NC_017999.1 1693607 1694164 R COG0634:Hypoxanthine-guaninephosphoribosyl transferase; hypoxanthine phosphoribosyl transferase complement(1693607..1694164) Bifidobacterium bifidum BGN4 13070063 YP_006394893.1 CDS tilS NC_017999.1 1694151 1695269 R COG0037:Predicted ATPase of the PP-loop superfamilyimplicated in cell cycle control; tRNA(Ile)-lysidine synthase complement(1694151..1695269) Bifidobacterium bifidum BGN4 13070064 YP_006394894.1 CDS dacB NC_017999.1 1695282 1696745 R COG2027:D-alanyl-D-alanine carboxypeptidase(penicillin-binding protein 4); D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- alanine-endopeptidase complement(1695282..1696745) Bifidobacterium bifidum BGN4 13070065 YP_006394895.1 CDS BBB_1425 NC_017999.1 1696804 1698459 R putative integral membrane transport protein complement(1696804..1698459) Bifidobacterium bifidum BGN4 13070066 YP_006394896.1 CDS nodI NC_017999.1 1698459 1699388 R COG1131:ABC-type multidrug transport system, ATPase component; Nod factor export ATP-binding protein complement(1698459..1699388) Bifidobacterium bifidum BGN4 13070067 YP_006394897.1 CDS pgaC NC_017999.1 1699527 1700750 R COG1215:Glycosyl transferases, probably involved incell wall biogenesis; biofilm PGA synthesis N-glycosyl transferase complement(1699527..1700750) Bifidobacterium bifidum BGN4 13070068 YP_006394898.1 CDS BBB_1428 NC_017999.1 1700750 1702354 R COG0628:Predicted permease; hypothetical protein complement(1700750..1702354) Bifidobacterium bifidum BGN4 13070069 YP_006394899.1 CDS BBB_1429 NC_017999.1 1702408 1703307 D COG0463:Glycosyl transferases involved in cell wallbiogenesis; putative glycosyl transferase 1702408..1703307 Bifidobacterium bifidum BGN4 13070070 YP_006394900.1 CDS fucO NC_017999.1 1703478 1704629 R COG1454:Alcohol dehydrogenase, class IV; lactaldehyde reductase complement(1703478..1704629) Bifidobacterium bifidum BGN4 13070071 YP_006394901.1 CDS BBB_1431 NC_017999.1 1705113 1705244 R hypothetical protein complement(1705113..1705244) Bifidobacterium bifidum BGN4 13070072 YP_006394902.1 CDS BBB_1432 NC_017999.1 1705995 1706702 R hypothetical protein complement(1705995..1706702) Bifidobacterium bifidum BGN4 13070075 YP_006394903.1 CDS galE NC_017999.1 1706997 1708010 R COG1087:UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1706997..1708010) Bifidobacterium bifidum BGN4 13070076 YP_006394904.1 CDS BBB_1434 NC_017999.1 1708075 1708224 R hypothetical protein complement(1708075..1708224) Bifidobacterium bifidum BGN4 13070077 YP_006394905.1 CDS trmB NC_017999.1 1708204 1709115 D COG0220:Predicted S-adenosylmethionine-dependentmethyl transferase; tRNA (guanine-N(7)-)-methyl transferase 1708204..1709115 Bifidobacterium bifidum BGN4 13070078 YP_006394906.1 CDS BBB_1436 NC_017999.1 1709201 1709755 R transcriptional regulator complement(1709201..1709755) Bifidobacterium bifidum BGN4 13070080 YP_006394907.1 CDS BBB_1437 NC_017999.1 1709867 1710010 D rep replicase 1709867..1710010 Bifidobacterium bifidum BGN4 13070081 YP_006394908.1 CDS lacS NC_017999.1 1710431 1711906 R COG2211:Na+/melibiose symporter and related transporters; lactose permease complement(1710431..1711906) Bifidobacterium bifidum BGN4 13070082 YP_006394909.1 CDS lacZ NC_017999.1 1712272 1715430 D COG3250:Beta-galactosidase/beta-glucuronidase; beta-galactosidase 1712272..1715430 Bifidobacterium bifidum BGN4 13070083 YP_006394910.1 CDS nagA NC_017999.1 1715449 1715952 D COG1820:N-acetylglucosamine-6-phosphatedeacetylase; N-acetylglucosamine-6-phosphate deacetylase 1715449..1715952 Bifidobacterium bifidum BGN4 13070084 YP_006394911.1 CDS lacR NC_017999.1 1715943 1716944 R COG1609:Transcriptional regulators; HTH-type transcriptional regulator complement(1715943..1716944) Bifidobacterium bifidum BGN4 13070085 YP_006394912.1 CDS cutS NC_017999.1 1717128 1718414 R COG0642:Signal transduction histidine kinase; sensor protein complement(1717128..1718414) Bifidobacterium bifidum BGN4 13070086 YP_006394913.1 CDS BBB_1443 NC_017999.1 1718411 1719067 R COG0745:Response regulators consisting of aCheY-like receiver domain and a winged-helix DNA-bindingdomain; response regulator complement(1718411..1719067) Bifidobacterium bifidum BGN4 13070087 YP_006394914.1 CDS BBB_1444 NC_017999.1 1719355 1719918 D hypothetical protein 1719355..1719918 Bifidobacterium bifidum BGN4 13070088 YP_006394915.1 CDS BBB_1445 NC_017999.1 1719983 1720663 D hypothetical protein 1719983..1720663 Bifidobacterium bifidum BGN4 13070089 YP_006394916.1 CDS istB NC_017999.1 1720706 1721485 R COG1484:DNA replication protein; Insertion sequence IS21, putative ATP-binding protein complement(1720706..1721485) Bifidobacterium bifidum BGN4 13070090 YP_006394917.1 CDS istA NC_017999.1 1721482 1722981 R COG4584:Transposase and inactivated derivatives; transposase for insertion sequence element IS21 complement(1721482..1722981) Bifidobacterium bifidum BGN4 13070091 YP_006394918.1 CDS BBB_1448 NC_017999.1 1723235 1723594 D hypothetical protein 1723235..1723594 Bifidobacterium bifidum BGN4 13070092 YP_006394919.1 CDS BBB_1449 NC_017999.1 1723584 1724186 D COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; ABC transporter ATP-binding protein 1723584..1724186 Bifidobacterium bifidum BGN4 13070093 YP_006394920.1 CDS BBB_1450 NC_017999.1 1724183 1725280 D hypothetical protein 1724183..1725280 Bifidobacterium bifidum BGN4 13070094 YP_006394921.1 CDS BBB_1451 NC_017999.1 1725457 1725738 D hypothetical protein 1725457..1725738 Bifidobacterium bifidum BGN4 13070095 YP_006394922.1 CDS BBB_1452 NC_017999.1 1725943 1727310 D COG0577:ABC-type antimicrobial peptide transportsystem, permease component; ABC transporter 1725943..1727310 Bifidobacterium bifidum BGN4 13070096 YP_006394923.1 CDS BBB_1453 NC_017999.1 1727310 1728530 D COG0577:ABC-type antimicrobial peptide transportsystem, permease component; ABC transporter ATP-binding protein 1727310..1728530 Bifidobacterium bifidum BGN4 13070097 YP_006394924.1 CDS lolD NC_017999.1 1728543 1729178 D COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; lipo protein-releasing system ATP-binding protein 1728543..1729178 Bifidobacterium bifidum BGN4 13070098 YP_006394925.1 CDS alzD NC_017999.1 1729535 1729717 D COG1687:Predicted branched-chain amino acidpermeases (azaleucine resistance); branched-chain amino acid transport protein 1729535..1729717 Bifidobacterium bifidum BGN4 13070099 YP_006394926.1 CDS BBB_1456 NC_017999.1 1729787 1730842 R COG0673:Predicted dehydrogenases and related proteins; putative oxidoreductase complement(1729787..1730842) Bifidobacterium bifidum BGN4 13070100 YP_006394927.1 CDS BBB_1457 NC_017999.1 1730842 1731000 R hypothetical protein complement(1730842..1731000) Bifidobacterium bifidum BGN4 13070101 YP_006394928.1 CDS ptpA NC_017999.1 1731070 1731588 R COG0394: protein-tyrosine-phosphatase; putative low molecular weight protein-tyrosine-phosphatase complement(1731070..1731588) Bifidobacterium bifidum BGN4 13070102 YP_006394929.1 CDS folA NC_017999.1 1731658 1732317 R COG0262:Dihydrofolate reductase; dihydrofolate reductase complement(1731658..1732317) Bifidobacterium bifidum BGN4 13070103 YP_006394930.1 CDS thyA NC_017999.1 1732365 1733237 R COG0207:Thymidylate synthase; thymidylate synthase complement(1732365..1733237) Bifidobacterium bifidum BGN4 13070104 YP_006394931.1 CDS BBB_1461 NC_017999.1 1733691 1734104 D COG1765:Predicted redox protein, regulator ofdisulfide bond formation; putative redox protein 1733691..1734104 Bifidobacterium bifidum BGN4 13070105 YP_006394932.1 CDS uspA NC_017999.1 1734248 1735288 R COG0589:Universal stress protein UspA and relatednucleotide-binding proteins; universal stress protein complement(1734248..1735288) Bifidobacterium bifidum BGN4 13070106 YP_006394933.1 CDS BBB_1463 NC_017999.1 1735568 1736344 R COG0791:Cell wall-associated hydrolases(invasion-associated proteins); membrane protein complement(1735568..1736344) Bifidobacterium bifidum BGN4 13070107 YP_006394934.1 CDS sle NC_017999.1 1736525 1737547 R COG3942:Surface antigen; N-acetylmuramoyl-L-alanine amidase complement(1736525..1737547) Bifidobacterium bifidum BGN4 13070108 YP_006394935.1 CDS BBB_1465 NC_017999.1 1737544 1737681 R hypothetical protein complement(1737544..1737681) Bifidobacterium bifidum BGN4 13070109 YP_006394936.1 CDS BBB_1466 NC_017999.1 1737742 1738854 D COG1932:Phosphoserine amino transferase; phosphoserine amino transferase 1737742..1738854 Bifidobacterium bifidum BGN4 13070110 YP_006394937.1 CDS BBB_1467 NC_017999.1 1738965 1739219 D hypothetical protein 1738965..1739219 Bifidobacterium bifidum BGN4 13070111 YP_006394938.1 CDS senX NC_017999.1 1739226 1740494 R COG0642:Signal transduction histidine kinase; sensor-like histidine kinase complement(1739226..1740494) Bifidobacterium bifidum BGN4 13070112 YP_006394939.1 CDS phoU NC_017999.1 1740678 1741358 D COG0704:Phosphate uptake regulator; phosphate transport system regulatory protein 1740678..1741358 Bifidobacterium bifidum BGN4 13070113 YP_006394940.1 CDS BBB_1470 NC_017999.1 1741578 1741871 R hypothetical protein complement(1741578..1741871) Bifidobacterium bifidum BGN4 13070114 YP_006394941.1 CDS gpmA NC_017999.1 1741895 1742635 R COG0588:Phosphoglycerate mutase 1; 2, 3-bisphosphoglycerate-dependentphosphoglycerate mutase complement(1741895..1742635) Bifidobacterium bifidum BGN4 13070115 YP_006394942.1 CDS menA NC_017999.1 1742713 1743678 R COG1575:1,4-dihydroxy-2-naphthoateoctaprenyl transferase; 1,4-dihydroxy-2-naphthoateoctaprenyl transferase complement(1742713..1743678) Bifidobacterium bifidum BGN4 13070116 YP_006394943.1 CDS lysS NC_017999.1 1743894 1745585 R COG1190:Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase complement(1743894..1745585) Bifidobacterium bifidum BGN4 13070117 YP_006394944.1 CDS araJ NC_017999.1 1745952 1747139 D COG2814:Arabinose efflux permease; arabinose efflux permease 1745952..1747139 Bifidobacterium bifidum BGN4 13070119 YP_006394945.1 CDS BBB_1475 NC_017999.1 1747316 1749379 D COG0457:FOG: TPR repeat; hypothetical protein 1747316..1749379 Bifidobacterium bifidum BGN4 13070120 YP_006394946.1 CDS BBB_1476 NC_017999.1 1749448 1750059 D hypothetical protein 1749448..1750059 Bifidobacterium bifidum BGN4 13070121 YP_006394947.1 CDS BBB_1477 NC_017999.1 1750113 1751090 R hypothetical protein complement(1750113..1751090) Bifidobacterium bifidum BGN4 13070122 YP_006394948.1 CDS pspC NC_017999.1 1751123 1753054 R phage shock protein C complement(1751123..1753054) Bifidobacterium bifidum BGN4 13070123 YP_006394949.1 CDS BBB_1479 NC_017999.1 1752919 1754397 D COG4585:Signal transduction histidine kinase; putative histidine kinase sensor of two component system 1752919..1754397 Bifidobacterium bifidum BGN4 13070124 YP_006394950.1 CDS BBB_1480 NC_017999.1 1754511 1755227 D COG2197:Response regulator containing a CheY-likereceiver domain and an HTH DNA-binding domain; response regulator of two- component system 1754511..1755227 Bifidobacterium bifidum BGN4 13070125 YP_006394951.1 CDS gnd NC_017999.1 1755349 1756797 D COG0362:6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 1755349..1756797 Bifidobacterium bifidum BGN4 13070126 YP_006394952.1 CDS pgl NC_017999.1 1757667 1758455 R COG0363:6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase; 6-phosphogluconolactonase complement(1757667..1758455) Bifidobacterium bifidum BGN4 13070127 YP_006394953.1 CDS opcA NC_017999.1 1758624 1759613 R COG3429:Glucose-6-P dehydrogenase subunit; outer membrane protein complement(1758624..1759613) Bifidobacterium bifidum BGN4 13070128 YP_006394954.1 CDS zwf NC_017999.1 1759610 1761196 R COG0364:Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate dehydrogenase complement(1759610..1761196) Bifidobacterium bifidum BGN4 13070129 YP_006394955.1 CDS BBB_1485 NC_017999.1 1761308 1761859 R putative transposase complement(1761308..1761859) Bifidobacterium bifidum BGN4 13070130 YP_006394956.1 CDS BBB_1486 NC_017999.1 1761976 1762440 R hypothetical protein complement(1761976..1762440) Bifidobacterium bifidum BGN4 13070131 YP_006394957.1 CDS BBB_1487 NC_017999.1 1762694 1768567 R alpha-N-acetylglucosaminidase complement(1762694..1768567) Bifidobacterium bifidum BGN4 13070132 YP_006394958.1 CDS serS NC_017999.1 1769165 1770451 R COG0172:Seryl-tRNA synthetase; seryl-tRNA synthetase complement(1769165..1770451) Bifidobacterium bifidum BGN4 13070134 YP_006394959.1 CDS BBB_1489 NC_017999.1 1770697 1775490 D COG2374:Predicted extracellular nuclease; putative 5'-nucleotidase 1770697..1775490 Bifidobacterium bifidum BGN4 13070135 YP_006394960.1 CDS sphK NC_017999.1 1775813 1776952 D COG1597:Sphingosine kinase and enzymes related toeukaryotic diacylglycerol kinase; sphingosine kinase 1775813..1776952 Bifidobacterium bifidum BGN4 13070136 YP_006394961.1 CDS licT NC_017999.1 1777034 1777879 R COG3711:Transcriptional antiterminator; transcription antiterminator complement(1777034..1777879) Bifidobacterium bifidum BGN4 13070137 YP_006394962.1 CDS ptsM NC_017999.1 1777930 1780008 R COG1263:Phospho transferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; PTS system mannose-specific transporter subunit IIBCA complement(1777930..1780008) Bifidobacterium bifidum BGN4 13070138 YP_006394963.1 CDS BBB_1493 NC_017999.1 1780397 1781794 D hypothetical protein 1780397..1781794 Bifidobacterium bifidum BGN4 13070139 YP_006394964.1 CDS pgm NC_017999.1 1782567 1784243 D COG0033:Phosphoglucomutase; alpha-D-glucose phosphate-specificphosphoglucomutase 1782567..1784243 Bifidobacterium bifidum BGN4 13070140 YP_006394965.1 CDS ykgC NC_017999.1 1784624 1786048 D COG1249:Pyruvate/2-oxoglutarate dehydrogenasecomplex, dihydrolipoamide dehydrogenase (E3) component, andre; putative pyridine nucleotide-disulfide oxidoreductase 1784624..1786048 Bifidobacterium bifidum BGN4 13070141 YP_006394966.1 CDS nagH NC_017999.1 1786161 1791809 R hyalurononglucosaminidase complement(1786161..1791809) Bifidobacterium bifidum BGN4 13070142 YP_006394967.1 CDS rnhA NC_017999.1 1792274 1793353 D COG0328:Ribonuclease HI; ribonuclease H 1792274..1793353 Bifidobacterium bifidum BGN4 13070143 YP_006394968.1 CDS rpiA NC_017999.1 1793503 1794201 D COG0120:Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A 1793503..1794201 Bifidobacterium bifidum BGN4 13070144 YP_006394969.1 CDS BBB_1499 NC_017999.1 1794369 1794458 R hypothetical protein complement(1794369..1794458) Bifidobacterium bifidum BGN4 13070145 YP_006394970.1 CDS BBB_1500 NC_017999.1 1794583 1795143 R hypothetical protein complement(1794583..1795143) Bifidobacterium bifidum BGN4 13070146 YP_006394971.1 CDS radA NC_017999.1 1795298 1796698 D COG1066:Predicted ATP-dependent serine protease; DNA repair protein 1795298..1796698 Bifidobacterium bifidum BGN4 13070147 YP_006394972.1 CDS ribF NC_017999.1 1796840 1798099 R COG0196:FAD synthase; riboflavin biosynthesis protein complement(1796840..1798099) Bifidobacterium bifidum BGN4 13070148 YP_006394973.1 CDS truB NC_017999.1 1798379 1799671 R COG0130:Pseudouridine synthase; tRNA pseudouridine synthase B complement(1798379..1799671) Bifidobacterium bifidum BGN4 13070149 YP_006394974.1 CDS rbfA NC_017999.1 1799714 1800298 R COG0858:Ribosome-binding factor A; ribosome-binding factor A complement(1799714..1800298) Bifidobacterium bifidum BGN4 13070150 YP_006394975.1 CDS infB NC_017999.1 1800605 1803571 R COG0532:Translation initiation factor 2(IF-2, GTPase); translation initiation factor IF-2 complement(1800605..1803571) Bifidobacterium bifidum BGN4 13070151 YP_006394976.1 CDS nusA NC_017999.1 1803781 1804809 R COG0195:Transcription elongation factor; transcription elongation protein complement(1803781..1804809) Bifidobacterium bifidum BGN4 13070152 YP_006394977.1 CDS BBB_1507 NC_017999.1 1804884 1805858 D hypothetical protein 1804884..1805858 Bifidobacterium bifidum BGN4 13070153 YP_006394978.1 CDS BBB_1508 NC_017999.1 1806223 1806954 D transposase-like protein 1806223..1806954 Bifidobacterium bifidum BGN4 13070154 YP_006394979.1 CDS BBB_1509 NC_017999.1 1807466 1808266 R COG1305:Transglutaminase-like enzymes, putativecysteine proteases; putative cysteine protease complement(1807466..1808266) Bifidobacterium bifidum BGN4 13070156 YP_006394980.1 CDS BBB_1510 NC_017999.1 1808388 1810571 R COG2308:Uncharacterized conserved protein; hypothetical protein complement(1808388..1810571) Bifidobacterium bifidum BGN4 13070157 YP_006394981.1 CDS truA NC_017999.1 1810757 1811671 R COG0101:Pseudouridylate synthase; tRNA pseudouridine synthase A complement(1810757..1811671) Bifidobacterium bifidum BGN4 13070158 YP_006394982.1 CDS BBB_1512 NC_017999.1 1812018 1816754 D COG3525:N-acetyl-beta-hexosaminidase; beta-hexosaminidase subunit alpha 1812018..1816754 Bifidobacterium bifidum BGN4 13070159 YP_006394983.1 CDS rplQ NC_017999.1 1817151 1817663 R COG0203:Ribosomal protein L17; 50S ribosomal protein L17 complement(1817151..1817663) Bifidobacterium bifidum BGN4 13070160 YP_006394984.1 CDS rpoA NC_017999.1 1817750 1818745 R COG0202:DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(1817750..1818745) Bifidobacterium bifidum BGN4 13069132 YP_006394985.1 CDS rpsK NC_017999.1 1818826 1819224 R COG0100:Ribosomal protein S11; 30S ribosomal protein S11 complement(1818826..1819224) Bifidobacterium bifidum BGN4 13069133 YP_006394986.1 CDS rpsM NC_017999.1 1819313 1819690 R COG0099:Ribosomal protein S13; 30S ribosomal protein S13 complement(1819313..1819690) Bifidobacterium bifidum BGN4 13069134 YP_006394987.1 CDS rpmJ NC_017999.1 1819823 1819936 R COG0257:Ribosomal protein L36; 50S ribosomal protein L36 complement(1819823..1819936) Bifidobacterium bifidum BGN4 13069135 YP_006394988.1 CDS infA NC_017999.1 1819960 1820178 R COG0361:Translation initiation factor 1 (IF-1); translation initiation factor IF-1 complement(1819960..1820178) Bifidobacterium bifidum BGN4 13069136 YP_006394989.1 CDS adk NC_017999.1 1820344 1820907 R COG0563:Adenylate kinase and related kinases; adenylate kinase complement(1820344..1820907) Bifidobacterium bifidum BGN4 13069137 YP_006394990.1 CDS secY NC_017999.1 1820975 1822309 R COG0201:Pre protein translocase subunit SecY; pre protein translocase subunit complement(1820975..1822309) Bifidobacterium bifidum BGN4 13069138 YP_006394991.1 CDS rplO NC_017999.1 1822512 1822967 R COG0200:Ribosomal protein L15; 50S ribosomal protein L15 complement(1822512..1822967) Bifidobacterium bifidum BGN4 13069139 YP_006394992.1 CDS rpmD NC_017999.1 1822970 1823152 R COG1841:Ribosomal protein L30/L7E; 50S ribosomal protein L30 complement(1822970..1823152) Bifidobacterium bifidum BGN4 13069140 YP_006394993.1 CDS rpsE NC_017999.1 1823152 1823886 R COG0098:Ribosomal protein S5; 30S ribosomal protein S5 complement(1823152..1823886) Bifidobacterium bifidum BGN4 13069141 YP_006394994.1 CDS rplR NC_017999.1 1823883 1824254 R COG0256:Ribosomal protein L18; 50S ribosomal protein L18 complement(1823883..1824254) Bifidobacterium bifidum BGN4 13069142 YP_006394995.1 CDS rplF NC_017999.1 1824256 1824795 R COG0097:Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(1824256..1824795) Bifidobacterium bifidum BGN4 13069143 YP_006394996.1 CDS rpsH NC_017999.1 1824813 1825211 R COG0096:Ribosomal protein S8; 30S ribosomal protein S8 complement(1824813..1825211) Bifidobacterium bifidum BGN4 13069144 YP_006394997.1 CDS rpsN NC_017999.1 1825301 1825486 R COG0199:Ribosomal protein S14; 30S ribosomal protein S14 complement(1825301..1825486) Bifidobacterium bifidum BGN4 13069145 YP_006394998.1 CDS rplE NC_017999.1 1825488 1826060 R COG0094:Ribosomal protein L5; 50S ribosomal protein L5 complement(1825488..1826060) Bifidobacterium bifidum BGN4 13069146 YP_006394999.1 CDS rplX NC_017999.1 1826057 1826392 R COG0198:Ribosomal protein L24; 50S ribosomal protein L24 complement(1826057..1826392) Bifidobacterium bifidum BGN4 13069147 YP_006395000.1 CDS rplN NC_017999.1 1826394 1826762 R COG0093:Ribosomal protein L14; 50S ribosomal protein L14 complement(1826394..1826762) Bifidobacterium bifidum BGN4 13069148 YP_006395001.1 CDS rpsQ NC_017999.1 1826855 1827121 R COG0186:Ribosomal protein S17; 30S ribosomal protein S17 complement(1826855..1827121) Bifidobacterium bifidum BGN4 13069149 YP_006395002.1 CDS rpmC NC_017999.1 1827124 1827381 R COG0255:Ribosomal protein L29; 50S ribosomal protein L29 complement(1827124..1827381) Bifidobacterium bifidum BGN4 13069150 YP_006395003.1 CDS rplP NC_017999.1 1827381 1827800 R COG0197:Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(1827381..1827800) Bifidobacterium bifidum BGN4 13069151 YP_006395004.1 CDS rpsC NC_017999.1 1827805 1828623 R COG0092:Ribosomal protein S3; 30S ribosomal protein S3 complement(1827805..1828623) Bifidobacterium bifidum BGN4 13069152 YP_006395005.1 CDS rplV NC_017999.1 1828625 1828984 R COG0091:Ribosomal protein L22; 50S ribosomal protein L22 complement(1828625..1828984) Bifidobacterium bifidum BGN4 13069153 YP_006395006.1 CDS rpsS NC_017999.1 1829000 1829278 R COG0185:Ribosomal protein S19; 30S ribosomal protein S19 complement(1829000..1829278) Bifidobacterium bifidum BGN4 13069154 YP_006395007.1 CDS rplB NC_017999.1 1829294 1830124 R COG0090:Ribosomal protein L2; 50S ribosomal protein L2 complement(1829294..1830124) Bifidobacterium bifidum BGN4 13069155 YP_006395008.1 CDS rplW NC_017999.1 1830161 1830457 R COG0089:Ribosomal protein L23; 50S ribosomal protein L23 complement(1830161..1830457) Bifidobacterium bifidum BGN4 13069156 YP_006395009.1 CDS rplD NC_017999.1 1830460 1831125 R COG0088:Ribosomal protein L4; 50S ribosomal protein L4 complement(1830460..1831125) Bifidobacterium bifidum BGN4 13069157 YP_006395010.1 CDS rplC NC_017999.1 1831131 1831784 R COG0087:Ribosomal protein L3; 50S ribosomal protein L3 complement(1831131..1831784) Bifidobacterium bifidum BGN4 13069158 YP_006395011.1 CDS rpsJ NC_017999.1 1831801 1832109 R COG0051:Ribosomal protein S10; 30S ribosomal protein S10 complement(1831801..1832109) Bifidobacterium bifidum BGN4 13069159 YP_006395012.1 CDS BBB_1542 NC_017999.1 1833113 1833679 D hypothetical protein 1833113..1833679 Bifidobacterium bifidum BGN4 13069160 YP_006395013.1 CDS budA NC_017999.1 1833864 1834631 D COG3527:Alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 1833864..1834631 Bifidobacterium bifidum BGN4 13069161 YP_006395014.1 CDS adh NC_017999.1 1834825 1837557 R COG1012:NAD-dependent aldehyde dehydrogenases; aldehyde-alcohol dehydrogenase complement(1834825..1837557) Bifidobacterium bifidum BGN4 13069162 YP_006395015.1 CDS nagC NC_017999.1 1837968 1839185 D COG1940:Transcriptional regulator/sugar kinase; N-acetylglucosamine repressor 1837968..1839185 Bifidobacterium bifidum BGN4 13069163 YP_006395016.1 CDS glgX NC_017999.1 1839182 1841767 D COG1523:Type II secretory pathway, pullulanase PulAand related glycosidases; glycogen debranching protein 1839182..1841767 Bifidobacterium bifidum BGN4 13069164 YP_006395017.1 CDS rpsI NC_017999.1 1841846 1842337 R COG0103:Ribosomal protein S9; 30S ribosomal protein S9 complement(1841846..1842337) Bifidobacterium bifidum BGN4 13069165 YP_006395018.1 CDS rplM NC_017999.1 1842359 1842808 R COG0102:Ribosomal protein L13; 50S ribosomal protein L13 complement(1842359..1842808) Bifidobacterium bifidum BGN4 13069166 YP_006395019.1 CDS malQ NC_017999.1 1843015 1845240 R COG1640:4-alpha-glucano transferase; 4-alpha-glucano transferase complement(1843015..1845240) Bifidobacterium bifidum BGN4 13069167 YP_006395020.1 CDS BBB_1550 NC_017999.1 1845413 1846114 R hypothetical protein complement(1845413..1846114) Bifidobacterium bifidum BGN4 13069168 YP_006395021.1 CDS BBB_1551 NC_017999.1 1846286 1846924 R COG1739:Uncharacterized conserved protein; hypothetical protein complement(1846286..1846924) Bifidobacterium bifidum BGN4 13069169 YP_006395022.1 CDS capA NC_017999.1 1846908 1848251 R COG2843:Putative enzyme of poly-gamma-glutamatebiosynthesis (capsule formation); PGA biosynthesis protein complement(1846908..1848251) Bifidobacterium bifidum BGN4 13069170 YP_006395023.1 CDS dinB NC_017999.1 1849177 1850469 D COG0389:Nucleotidyl transferase/DNA polymeraseinvolved in DNA repair; DNA polymerase IV 1849177..1850469 Bifidobacterium bifidum BGN4 13069172 YP_006395024.1 CDS aatC NC_017999.1 1850493 1851671 R COG0436:Aspartate/tyrosine/aromaticamino transferase; putative amino transferase complement(1850493..1851671) Bifidobacterium bifidum BGN4 13069173 YP_006395025.1 CDS fdxA NC_017999.1 1851790 1852113 R COG1146:Ferredoxin; ferredoxin complement(1851790..1852113) Bifidobacterium bifidum BGN4 13069174 YP_006395026.1 CDS murB NC_017999.1 1852238 1853452 R COG0812:UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1852238..1853452) Bifidobacterium bifidum BGN4 13069175 YP_006395027.1 CDS rpmG NC_017999.1 1853571 1853741 R COG0267:Ribosomal protein L33; 50S ribosomal protein L33 complement(1853571..1853741) Bifidobacterium bifidum BGN4 13069176 YP_006395028.1 CDS moxR NC_017999.1 1854546 1854908 R COG0714:MoxR-like ATPases; methanol dehydrogenase regulator complement(1854546..1854908) Bifidobacterium bifidum BGN4 13069180 YP_006395029.1 CDS BBB_1559 NC_017999.1 1854949 1855707 R COG2367:Beta-lactamase class A; beta-lactamase complement(1854949..1855707) Bifidobacterium bifidum BGN4 13069181 YP_006395030.1 CDS groS NC_017999.1 1855904 1856197 R COG0234:Co-chaperonin GroES (HSP10); chaperonin complement(1855904..1856197) Bifidobacterium bifidum BGN4 13069182 YP_006395031.1 CDS BBB_1561 NC_017999.1 1856374 1857729 R membrane protein complement(1856374..1857729) Bifidobacterium bifidum BGN4 13069183 YP_006395032.1 CDS rimJ NC_017999.1 1857754 1858488 R COG1670:Acetyl transferases, including N-acetylasesof ribosomal proteins; ribosomal- protein-alanine acetyl transferase complement(1857754..1858488) Bifidobacterium bifidum BGN4 13069184 YP_006395033.1 CDS BBB_1563 NC_017999.1 1858550 1859203 D COG0212:5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1858550..1859203 Bifidobacterium bifidum BGN4 13069185 YP_006395034.1 CDS BBB_1564 NC_017999.1 1859357 1859551 D COG2331:Uncharacterized protein conserved inbacteria; putative regulatory protein 1859357..1859551 Bifidobacterium bifidum BGN4 13069186 YP_006395035.1 CDS BBB_1565 NC_017999.1 1859690 1859806 R hypothetical protein complement(1859690..1859806) Bifidobacterium bifidum BGN4 13069187 YP_006395036.1 CDS BBB_1566 NC_017999.1 1859760 1860362 D SAF domain containing protein 1859760..1860362 Bifidobacterium bifidum BGN4 13069188 YP_006395037.1 CDS BBB_1567 NC_017999.1 1860464 1860685 R hypothetical protein complement(1860464..1860685) Bifidobacterium bifidum BGN4 13069189 YP_006395038.1 CDS BBB_1568 NC_017999.1 1860715 1864332 R COG1112:Superfamily I DNA and RNA helicases andhelicase subunits; superfamily I DNA and RNA helicase, helicase subunit complement(1860715..1864332) Bifidobacterium bifidum BGN4 13069190 YP_006395039.1 CDS BBB_1569 NC_017999.1 1864341 1866002 R FHA domain-containing protein complement(1864341..1866002) Bifidobacterium bifidum BGN4 13069191 YP_006395040.1 CDS BBB_1570 NC_017999.1 1866167 1866283 R hypothetical protein complement(1866167..1866283) Bifidobacterium bifidum BGN4 13069192 YP_006395041.1 CDS rplL NC_017999.1 1866295 1866678 R COG0222:Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(1866295..1866678) Bifidobacterium bifidum BGN4 13069193 YP_006395042.1 CDS rplJ NC_017999.1 1866778 1867299 R COG0244:Ribosomal protein L10; 50S ribosomal protein L10 complement(1866778..1867299) Bifidobacterium bifidum BGN4 13069194 YP_006395043.1 CDS BBB_1573 NC_017999.1 1867507 1868526 R putative O-antigen related protein complement(1867507..1868526) Bifidobacterium bifidum BGN4 13069195 YP_006395044.1 CDS BBB_1574 NC_017999.1 1868881 1874376 R COG5492:Bacterial surface proteins containingIg-like domains; hypothetical protein complement(1868881..1874376) Bifidobacterium bifidum BGN4 13069196 YP_006395045.1 CDS BBB_1575 NC_017999.1 1874641 1874796 R hypothetical protein complement(1874641..1874796) Bifidobacterium bifidum BGN4 13069197 YP_006395046.1 CDS BBB_1576 NC_017999.1 1874896 1876290 R COG2252:Permeases; xanthine/uracil permease family protein complement(1874896..1876290) Bifidobacterium bifidum BGN4 13069198 YP_006395047.1 CDS BBB_1577 NC_017999.1 1876346 1876462 R hypothetical protein complement(1876346..1876462) Bifidobacterium bifidum BGN4 13069199 YP_006395048.1 CDS BBB_1578 NC_017999.1 1876516 1877418 D hypothetical protein 1876516..1877418 Bifidobacterium bifidum BGN4 13069200 YP_006395049.1 CDS pstB NC_017999.1 1877712 1878491 R COG1117:ABC-type phosphate transport system, ATPase component; phosphate ABC transporter ATP-binding protein complement(1877712..1878491) Bifidobacterium bifidum BGN4 13069201 YP_006395050.1 CDS pstA NC_017999.1 1878531 1879577 R COG0581:ABC-type phosphate transportsystem, permease component; phosphate ABC transporter permease complement(1878531..1879577) Bifidobacterium bifidum BGN4 13069202 YP_006395051.1 CDS pstC NC_017999.1 1879574 1880551 R COG0573:ABC-type phosphate transportsystem, permease component; phosphate ABC transporter permease complement(1879574..1880551) Bifidobacterium bifidum BGN4 13069203 YP_006395052.1 CDS pstS NC_017999.1 1880680 1881810 R COG0226:ABC-type phosphate transportsystem, periplasmic component; phosphate ABC transporter substrate-binding protein complement(1880680..1881810) Bifidobacterium bifidum BGN4 13069204 YP_006395053.1 CDS BBB_1583 NC_017999.1 1882057 1882761 R COG0745:Response regulators consisting of aCheY-like receiver domain and a winged-helix DNA-bindingdomain; response regulator of two- component system complement(1882057..1882761) Bifidobacterium bifidum BGN4 13069205 YP_006395054.1 CDS senX NC_017999.1 1882914 1884269 R COG0642:Signal transduction histidine kinase; sensor-like histidine kinase complement(1882914..1884269) Bifidobacterium bifidum BGN4 13069206 YP_006395055.1 CDS mtnN NC_017999.1 1884458 1885165 R COG0775:Nucleoside phosphorylase; MTA/SAH nucleosidase complement(1884458..1885165) Bifidobacterium bifidum BGN4 13069207 YP_006395056.1 CDS BBB_1586 NC_017999.1 1885213 1886451 R COG0722:3-deoxy-D-arabino-heptulosonate 7-phosphate(DAHP) synthase; 3-deoxy-7-phosphoheptulonate synthase complement(1885213..1886451) Bifidobacterium bifidum BGN4 13069208 YP_006395057.1 CDS BBB_1587 NC_017999.1 1887082 1887702 D COG0640:Predicted transcriptional regulators; putative ArsR-family transcriptional regulator 1887082..1887702 Bifidobacterium bifidum BGN4 13069209 YP_006395058.1 CDS BBB_1588 NC_017999.1 1887824 1889206 D COG0477:Permeases of the major facilitatorsuperfamily; hypothetical protein 1887824..1889206 Bifidobacterium bifidum BGN4 13069210 YP_006395059.1 CDS BBB_1589 NC_017999.1 1889352 1890482 R COG0722:3-deoxy-D-arabino-heptulosonate 7-phosphate(DAHP) synthase; 3-deoxy-7-phosphoheptulonate synthase complement(1889352..1890482) Bifidobacterium bifidum BGN4 13069211 YP_006395060.1 CDS BBB_1590 NC_017999.1 1890693 1891727 R excalibur domain containing protein complement(1890693..1891727) Bifidobacterium bifidum BGN4 13069212 YP_006395061.1 CDS pepC NC_017999.1 1891942 1893297 R COG3579:Aminopeptidase C; aminopeptidase C complement(1891942..1893297) Bifidobacterium bifidum BGN4 13069213 YP_006395062.1 CDS BBB_1592 NC_017999.1 1893533 1894999 R COG3599:Cell division initiation protein; hypothetical protein complement(1893533..1894999) Bifidobacterium bifidum BGN4 13069214 YP_006395063.1 CDS pcp NC_017999.1 1895148 1895825 R COG2039:Pyrrolidone-carboxylate peptidase(N-terminal pyroglutamyl peptidase); pyrrolidone-carboxylate peptidase complement(1895148..1895825) Bifidobacterium bifidum BGN4 13069215 YP_006395064.1 CDS ispD NC_017999.1 1895859 1896659 R COG1211:4-diphosphocytidyl-2-methyl-D- erithritolsynthase; 2-C-methyl-D-erythritol 4-phosphatecytidylyl transferase complement(1895859..1896659) Bifidobacterium bifidum BGN4 13069216 YP_006395065.1 CDS BBB_1595 NC_017999.1 1897023 1898033 R COG1496:Uncharacterized conserved protein; hypothetical protein complement(1897023..1898033) Bifidobacterium bifidum BGN4 13069217 YP_006395066.1 CDS yegQ NC_017999.1 1898082 1899755 R COG0826:Collagenase and related proteases; putative protease complement(1898082..1899755) Bifidobacterium bifidum BGN4 13069218 YP_006395067.1 CDS yccK NC_017999.1 1901125 1901991 R COG0667:Predicted oxidoreductases ( related toaryl-alcohol dehydrogenases); putative oxidoreductase complement(1901125..1901991) Bifidobacterium bifidum BGN4 13069220 YP_006395068.1 CDS nrdH NC_017999.1 1902437 1902694 D COG0695:Glutaredoxin and related proteins; putative glutaredoxin 1902437..1902694 Bifidobacterium bifidum BGN4 13069221 YP_006395069.1 CDS nrdI NC_017999.1 1902853 1903263 D COG1780: protein involved in ribonucleotidereduction; ribonucleotide reductase 1902853..1903263 Bifidobacterium bifidum BGN4 13069222 YP_006395070.1 CDS BBB_1601 NC_017999.1 1903314 1905509 D COG0209:Ribonucleotide reductase, alpha subunit; ribonucleoside-diphosphate reductase, subunitalpha 1903314..1905509 Bifidobacterium bifidum BGN4 13069223 YP_006395071.1 CDS nrdF NC_017999.1 1905796 1906788 D COG0208:Ribonucleotide reductase, beta subunit; ribonucleoside-diphosphate reductase, subunitbeta 1905796..1906788 Bifidobacterium bifidum BGN4 13069224 YP_006395072.1 CDS mdeA NC_017999.1 1907046 1907597 D COG0626:Cystathionine beta-lyases/cystathioninegamma-synthases; methionine gamma-lyase 1907046..1907597 Bifidobacterium bifidum BGN4 13069225 YP_006395073.1 CDS BBB_1604 NC_017999.1 1907678 1909936 R COG4907:Predicted membrane protein; hypothetical protein complement(1907678..1909936) Bifidobacterium bifidum BGN4 13069226 YP_006395074.1 CDS lemA NC_017999.1 1910000 1910572 R COG1704:Uncharacterized conserved protein; putative cytoplasmic membrane protein complement(1910000..1910572) Bifidobacterium bifidum BGN4 13069227 YP_006395075.1 CDS celR NC_017999.1 1910682 1910954 D COG1609:Transcriptional regulators; HTH-type transcriptional regulator 1910682..1910954 Bifidobacterium bifidum BGN4 13069228 YP_006395076.1 CDS gpsI NC_017999.1 1911853 1914516 R COG1185:Polyribonucleotide nucleotidyl transferase(polynucleotide phosphorylase); guanosine pentaphosphate synthetaseI/polyribonucleotide nucleotidyl transferase complement(1911853..1914516) Bifidobacterium bifidum BGN4 13069229 YP_006395077.1 CDS rpsO NC_017999.1 1914777 1915046 R COG0184:Ribosomal protein S15P/S13E; 30S ribosomal protein S15 complement(1914777..1915046) Bifidobacterium bifidum BGN4 13069230 YP_006395078.1 CDS BBB_1609 NC_017999.1 1915179 1915856 R the export of O-antigen and teichoic acid related membrane protein complement(1915179..1915856) Bifidobacterium bifidum BGN4 13069231 YP_006395079.1 CDS nagH NC_017999.1 1916088 1919492 R hyalurononglucosaminidase complement(1916088..1919492) Bifidobacterium bifidum BGN4 13069232 YP_006395081.1 CDS birA NC_017999.1 1919968 1920846 R COG0340:Biotin-(acetyl-CoA carboxylase) ligase; biotin acetyl-CoA-carboxylase synthetase complement(1919968..1920846) Bifidobacterium bifidum BGN4 13069234 YP_006395082.1 CDS acpS NC_017999.1 1921170 1921733 R COG0736:Phosphopantetheinyl transferase (holo-ACPsynthase); Holo-[acyl-carrier- protein] synthase complement(1921170..1921733) Bifidobacterium bifidum BGN4 13069235 YP_006395083.1 CDS fas NC_017999.1 1922250 1931651 R COG4982:3-oxoacyl-acyl-carrier protein reductase; fatty acid synthase subunit alpha complement(1922250..1931651) Bifidobacterium bifidum BGN4 13069236 YP_006395084.1 CDS pccB NC_017999.1 1931755 1933389 R COG4799:Acetyl-CoA carboxylase, carboxyl transferase component ( subunits alpha and beta); propionyl-CoA carboxylase subunit beta complement(1931755..1933389) Bifidobacterium bifidum BGN4 13069237 YP_006395085.1 CDS bccA NC_017999.1 1933389 1935299 R COG4770:Acetyl/propionyl-CoA carboxylase, alpha subunit; acetyl-/propionyl-coenzyme A carboxylase subunit alpha complement(1933389..1935299) Bifidobacterium bifidum BGN4 13069238 YP_006395086.1 CDS bioY NC_017999.1 1935546 1936127 D COG1268:Uncharacterized conserved protein; transmembranal protein 1935546..1936127 Bifidobacterium bifidum BGN4 13069239 YP_006395087.1 CDS birA NC_017999.1 1936306 1937148 R COG0340:Biotin-(acetyl-CoA carboxylase) ligase; biotin acetyl-CoA-carboxylase synthetase complement(1936306..1937148) Bifidobacterium bifidum BGN4 13069240 YP_006395088.1 CDS BBB_1619 NC_017999.1 1937186 1937299 R hypothetical protein complement(1937186..1937299) Bifidobacterium bifidum BGN4 13069241 YP_006395089.1 CDS BBB_1620 NC_017999.1 1937273 1939393 D sugar ABC transporter periplasmic protein 1937273..1939393 Bifidobacterium bifidum BGN4 13069242 YP_006395090.1 CDS BBB_1621 NC_017999.1 1939424 1940242 D COG2508:Regulator of polyketide synthaseexpression; putative transcriptional regulator, PucR family protein 1939424..1940242 Bifidobacterium bifidum BGN4 13069244 YP_006395091.1 CDS BBB_1622 NC_017999.1 1940410 1941111 R COG1637:Predicted nuclease of the RecB family; hypothetical protein complement(1940410..1941111) Bifidobacterium bifidum BGN4 13069245 YP_006395092.1 CDS atpC NC_017999.1 1941484 1941786 R COG0355:F0F1-type ATP synthase, epsilon subunit(mitochondrial delta subunit); ATP synthase subunit epsilon complement(1941484..1941786) Bifidobacterium bifidum BGN4 13069246 YP_006395093.1 CDS atpD NC_017999.1 1941786 1943270 R COG0055:F0F1-type ATP synthase, beta subunit; ATP synthase F1 subunit beta complement(1941786..1943270) Bifidobacterium bifidum BGN4 13069247 YP_006395094.1 CDS atpG NC_017999.1 1943279 1944217 R COG0224:F0F1-type ATP synthase, gamma subunit; ATP synthase F1 subunit gamma complement(1943279..1944217) Bifidobacterium bifidum BGN4 13069248 YP_006395095.1 CDS atpA NC_017999.1 1944221 1945900 R COG0056:F0F1-type ATP synthase, alpha subunit; ATP synthase F1 subunit alpha complement(1944221..1945900) Bifidobacterium bifidum BGN4 13069249 YP_006395096.1 CDS atpH NC_017999.1 1945974 1946801 R COG0712:F0F1-type ATP synthase, delta subunit(mitochondrial oligomycin sensitivity protein); ATP synthase F1 subunit delta complement(1945974..1946801) Bifidobacterium bifidum BGN4 13069250 YP_006395097.1 CDS atpF NC_017999.1 1946831 1947358 R COG0711:F0F1-type ATP synthase, subunit b; ATP synthase F0 subunit B complement(1946831..1947358) Bifidobacterium bifidum BGN4 13069251 YP_006395098.1 CDS atpE NC_017999.1 1947412 1947642 R ATP synthase F0 subunit C complement(1947412..1947642) Bifidobacterium bifidum BGN4 13069252 YP_006395099.1 CDS atpB NC_017999.1 1947754 1948566 R COG0356:F0F1-type ATP synthase, subunit a; ATP synthase F0 subunit A complement(1947754..1948566) Bifidobacterium bifidum BGN4 13069253 YP_006395100.1 CDS metA NC_017999.1 1949096 1950130 R COG1897:Homoserine trans-succinylase; homoserine O-succinyl transferase complement(1949096..1950130) Bifidobacterium bifidum BGN4 13069254 YP_006395101.1 CDS BBB_1632 NC_017999.1 1950783 1950905 R hypothetical protein complement(1950783..1950905) Bifidobacterium bifidum BGN4 13069256 YP_006395102.1 CDS BBB_1633 NC_017999.1 1952065 1952343 D hypothetical protein 1952065..1952343 Bifidobacterium bifidum BGN4 13069257 YP_006395103.1 CDS BBB_1634 NC_017999.1 1952351 1952518 D hypothetical protein 1952351..1952518 Bifidobacterium bifidum BGN4 13069258 YP_006395104.1 CDS BBB_1635 NC_017999.1 1953008 1953349 D hypothetical protein 1953008..1953349 Bifidobacterium bifidum BGN4 13069259 YP_006395105.1 CDS BBB_1636 NC_017999.1 1953542 1954264 D putative endonuclease 1953542..1954264 Bifidobacterium bifidum BGN4 13069260 YP_006395106.1 CDS BBB_1637 NC_017999.1 1954520 1956139 D putative phage terminase 1954520..1956139 Bifidobacterium bifidum BGN4 13069261 YP_006395107.1 CDS BBB_1638 NC_017999.1 1956252 1957382 D COG4695:Phage- related protein; phage portal protein 1956252..1957382 Bifidobacterium bifidum BGN4 13069262 YP_006395108.1 CDS BBB_1639 NC_017999.1 1957372 1958958 D COG3740:Phage head maturation protease; phage prohead protease 1957372..1958958 Bifidobacterium bifidum BGN4 13069263 YP_006395109.1 CDS BBB_1640 NC_017999.1 1958960 1959292 D hypothetical protein 1958960..1959292 Bifidobacterium bifidum BGN4 13069264 YP_006395110.1 CDS BBB_1641 NC_017999.1 1959289 1959672 D hypothetical protein 1959289..1959672 Bifidobacterium bifidum BGN4 13069266 YP_006395111.1 CDS BBB_1642 NC_017999.1 1959676 1960098 D hypothetical protein 1959676..1960098 Bifidobacterium bifidum BGN4 13069267 YP_006395112.1 CDS BBB_1643 NC_017999.1 1960095 1960478 D hypothetical protein 1960095..1960478 Bifidobacterium bifidum BGN4 13069268 YP_006395113.1 CDS BBB_1644 NC_017999.1 1960481 1960753 D hypothetical protein 1960481..1960753 Bifidobacterium bifidum BGN4 13069269 YP_006395114.1 CDS BBB_1645 NC_017999.1 1960792 1960923 D hypothetical protein 1960792..1960923 Bifidobacterium bifidum BGN4 13069270 YP_006395115.1 CDS BBB_1646 NC_017999.1 1960931 1963408 D COG5412:Phage- related protein; minor tail protein 1960931..1963408 Bifidobacterium bifidum BGN4 13069271 YP_006395116.1 CDS BBB_1647 NC_017999.1 1963405 1964880 D hypothetical protein 1963405..1964880 Bifidobacterium bifidum BGN4 13069272 YP_006395117.1 CDS BBB_1648 NC_017999.1 1964877 1965728 D hypothetical protein 1964877..1965728 Bifidobacterium bifidum BGN4 13069273 YP_006395118.1 CDS BBB_1649 NC_017999.1 1965742 1966098 D COG4824:Phage- related holin (Lysis protein); hypothetical protein 1965742..1966098 Bifidobacterium bifidum BGN4 13069274 YP_006395119.1 CDS BBB_1650 NC_017999.1 1966110 1966886 D lysin 1966110..1966886 Bifidobacterium bifidum BGN4 13069275 YP_006395120.1 CDS BBB_1651 NC_017999.1 1966883 1967710 R COG0582:Integrase; putative tyrosine recombinase complement(1966883..1967710) Bifidobacterium bifidum BGN4 13069276 YP_006395121.1 CDS BBB_1652 NC_017999.1 1968220 1968390 R hypothetical protein complement(1968220..1968390) Bifidobacterium bifidum BGN4 13069277 YP_006395122.1 CDS BBB_1653 NC_017999.1 1968493 1968720 D hypothetical protein 1968493..1968720 Bifidobacterium bifidum BGN4 13069278 YP_006395123.1 CDS BBB_1654 NC_017999.1 1968871 1971144 R hypothetical protein complement(1968871..1971144) Bifidobacterium bifidum BGN4 13069279 YP_006395124.1 CDS BBB_1655 NC_017999.1 1971377 1973683 D COG0366:Glycosidases; putative glycanase or glycogenase 1971377..1973683 Bifidobacterium bifidum BGN4 13069280 YP_006395125.1 CDS ppa NC_017999.1 1973850 1974344 D COG0221:Inorganic pyrophosphatase; inorganic pyrophosphatase 1973850..1974344 Bifidobacterium bifidum BGN4 13069281 YP_006395126.1 CDS BBB_1657 NC_017999.1 1974865 1975452 D COG1971:Predicted membrane protein; hypothetical protein 1974865..1975452 Bifidobacterium bifidum BGN4 13069282 YP_006395127.1 CDS BBB_1658 NC_017999.1 1975637 1975792 D hypothetical protein 1975637..1975792 Bifidobacterium bifidum BGN4 13069283 YP_006395128.1 CDS BBB_1659 NC_017999.1 1975930 1976685 R hypothetical protein complement(1975930..1976685) Bifidobacterium bifidum BGN4 13069284 YP_006395129.1 CDS glnR NC_017999.1 1976835 1977596 D COG0745:Response regulators consisting of aCheY-like receiver domain and a winged-helix DNA-bindingdomain; transcriptional regulator 1976835..1977596 Bifidobacterium bifidum BGN4 13069285 YP_006395130.1 CDS nth NC_017999.1 1977609 1978271 D COG0177:Predicted EndoIII- related endonuclease; endonuclease III 1977609..1978271 Bifidobacterium bifidum BGN4 13069286 YP_006395131.1 CDS ddpA NC_017999.1 1978355 1979911 D COG0747:ABC-type dipeptide transportsystem, periplasmic component; putative D, D-dipeptide-binding periplasmic protein 1978355..1979911 Bifidobacterium bifidum BGN4 13069287 YP_006395132.1 CDS valS NC_017999.1 1979994 1982735 D COG0525:Valyl-tRNA synthetase; valyl-tRNA synthetase 1979994..1982735 Bifidobacterium bifidum BGN4 13069288 YP_006395133.1 CDS BBB_1664 NC_017999.1 1982846 1985023 R COG1511:Predicted membrane protein; hypothetical protein complement(1982846..1985023) Bifidobacterium bifidum BGN4 13069289 YP_006395134.1 CDS BBB_1665 NC_017999.1 1985148 1985576 R COG1605:Chorismate mutase; chorismate mutase complement(1985148..1985576) Bifidobacterium bifidum BGN4 13069290 YP_006395135.1 CDS lrp NC_017999.1 1985689 1986111 R COG1522:Transcriptional regulators; transcriptional regulator complement(1985689..1986111) Bifidobacterium bifidum BGN4 13069291 YP_006395136.1 CDS aspC NC_017999.1 1986401 1987630 D COG0436:Aspartate/tyrosine/aromaticamino transferase; aspartate amino transferase 1986401..1987630 Bifidobacterium bifidum BGN4 13069292 YP_006395137.1 CDS rho NC_017999.1 1987728 1989788 R COG1158:Transcription termination factor; transcription termination factor complement(1987728..1989788) Bifidobacterium bifidum BGN4 13069293 YP_006395138.1 CDS hemY NC_017999.1 1989993 1991606 R COG1232:Protoporphyrinogen oxidase; amine oxidase complement(1989993..1991606) Bifidobacterium bifidum BGN4 13069294 YP_006395139.1 CDS BBB_1670 NC_017999.1 1991846 1992160 R hypothetical protein complement(1991846..1992160) Bifidobacterium bifidum BGN4 13069295 YP_006395140.1 CDS rimL NC_017999.1 1992157 1993200 R putative acetyl transferase complement(1992157..1993200) Bifidobacterium bifidum BGN4 13069296 YP_006395141.1 CDS gatB NC_017999.1 1993416 1994915 R COG0064:Asp-tRNAAsn/Glu-tRNAGln amido transferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA(Asn/Gln) amido transferase subunit B complement(1993416..1994915) Bifidobacterium bifidum BGN4 13069297 YP_006395142.1 CDS gatA NC_017999.1 1994940 1996478 R COG0154:Asp-tRNAAsn/Glu-tRNAGln amido transferase A subunit and related amidases; glutamyl-tRNA(Gln) amido transferase subunit A complement(1994940..1996478) Bifidobacterium bifidum BGN4 13069298 YP_006395143.1 CDS gatC NC_017999.1 1996481 1996810 R COG0721:Asp-tRNAAsn/Glu-tRNAGln amido transferase C subunit; aspartyl/glutamyl-tRNA(Asn/Gln) amido transferase subunit C complement(1996481..1996810) Bifidobacterium bifidum BGN4 13069299 YP_006395144.1 CDS BBB_1675 NC_017999.1 1996915 1997037 R hypothetical protein complement(1996915..1997037) Bifidobacterium bifidum BGN4 13069300 YP_006395145.1 CDS BBB_1676 NC_017999.1 1997070 1997465 R COG1131:ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(1997070..1997465) Bifidobacterium bifidum BGN4 13069301 YP_006395146.1 CDS yhcH NC_017999.1 1997456 1997824 R COG1131:ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(1997456..1997824) Bifidobacterium bifidum BGN4 13069302 YP_006395147.1 CDS trm3 NC_017999.1 1997891 1998775 R COG0566:rRNA methylases; tRNA guanosine-2'-O-methyl transferase complement(1997891..1998775) Bifidobacterium bifidum BGN4 13069303 YP_006395148.1 CDS pyrE NC_017999.1 1998778 1999449 R orotate phosphoribosyl transferase complement(1998778..1999449) Bifidobacterium bifidum BGN4 13069304 YP_006395149.1 CDS rmuC NC_017999.1 1999583 2000914 R COG1322:Uncharacterized protein conserved inbacteria; DNA recombination protein complement(1999583..2000914) Bifidobacterium bifidum BGN4 13069305 YP_006395150.1 CDS BBB_1681 NC_017999.1 2000958 2001278 R COG1937:Uncharacterized protein conserved inbacteria; hypothetical protein complement(2000958..2001278) Bifidobacterium bifidum BGN4 13069306 YP_006395151.1 CDS BBB_1682 NC_017999.1 2001353 2004001 D COG2217:Cation transport ATPase; copper-translocating P-type ATPase 2001353..2004001 Bifidobacterium bifidum BGN4 13069307 YP_006395152.1 CDS BBB_1683 NC_017999.1 2004069 2005934 R COG0661:Predicted unusual protein kinase; hypothetical protein complement(2004069..2005934) Bifidobacterium bifidum BGN4 13069308 YP_006395153.1 CDS BBB_1684 NC_017999.1 2005882 2006232 R hypothetical protein complement(2005882..2006232) Bifidobacterium bifidum BGN4 13069309 YP_006395154.1 CDS cobQ NC_017999.1 2006377 2007126 R COG3442:Predicted glutamine amido transferase; cobyric acid synthase complement(2006377..2007126) Bifidobacterium bifidum BGN4 13069310 YP_006395155.1 CDS murD NC_017999.1 2007170 2008744 R COG0769:UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(2007170..2008744) Bifidobacterium bifidum BGN4 13069311 YP_006395156.1 CDS dnaB NC_017999.1 2008741 2010276 R COG0305:Replicative DNA helicase; replicative DNA helicase complement(2008741..2010276) Bifidobacterium bifidum BGN4 13069312 YP_006395157.1 CDS matE NC_017999.1 2010500 2011984 D COG0534:Na+-driven multidrug efflux pump; MatE efflux family protein 2010500..2011984 Bifidobacterium bifidum BGN4 13069313 YP_006395158.1 CDS glnD NC_017999.1 2012330 2014201 R COG2844:UTP:GlnB ( protein PII) uridylyl transferase; uridylyl transferase complement(2012330..2014201) Bifidobacterium bifidum BGN4 13069314 YP_006395159.1 CDS glnB NC_017999.1 2014478 2014816 R COG0347:Nitrogen regulatory protein PII; nitrogen regulatory protein P-II complement(2014478..2014816) Bifidobacterium bifidum BGN4 13069315 YP_006395160.1 CDS amt NC_017999.1 2014818 2016116 R COG0004:Ammonia permease; ammonium transporter complement(2014818..2016116) Bifidobacterium bifidum BGN4 13069316 YP_006395161.1 CDS ftsY NC_017999.1 2016411 2017652 R COG0552:Signal recognition particle GTPase; signal recognition particle-docking protein complement(2016411..2017652) Bifidobacterium bifidum BGN4 13069317 YP_006395162.1 CDS BBB_1693 NC_017999.1 2017728 2018024 R hypothetical protein complement(2017728..2018024) Bifidobacterium bifidum BGN4 13069318 YP_006395163.1 CDS yjgJ NC_017999.1 2018129 2018893 D COG1309:Transcriptional regulator; putative HTH-type transcriptional regulator 2018129..2018893 Bifidobacterium bifidum BGN4 13069319 YP_006395164.1 CDS yibD NC_017999.1 2019061 2020095 D COG0463:Glycosyl transferases involved in cell wallbiogenesis; putative glycosyl transferase 2019061..2020095 Bifidobacterium bifidum BGN4 13069320 YP_006395165.1 CDS BBB_1696 NC_017999.1 2020162 2022063 D hypothetical protein 2020162..2022063 Bifidobacterium bifidum BGN4 13069321 YP_006395166.1 CDS pepDA NC_017999.1 2022221 2023765 R COG4690:Dipeptidase; putative dipeptidase A complement(2022221..2023765) Bifidobacterium bifidum BGN4 13069322 YP_006395167.1 CDS BBB_1698 NC_017999.1 2023921 2024454 D hypothetical protein 2023921..2024454 Bifidobacterium bifidum BGN4 13069323 YP_006395168.1 CDS BBB_1699 NC_017999.1 2024435 2024668 R hypothetical protein complement(2024435..2024668) Bifidobacterium bifidum BGN4 13069324 YP_006395169.1 CDS cbiQ NC_017999.1 2024722 2025273 D COG0619:ABC-type cobalt transport system, permease component CbiQ and related transporters; putative ABC transporter permease for cobalt 2024722..2025273 Bifidobacterium bifidum BGN4 13069325 YP_006395170.1 CDS BBB_1701 NC_017999.1 2025345 2025809 D hypothetical protein 2025345..2025809 Bifidobacterium bifidum BGN4 13069326 YP_006395171.1 CDS BBB_1702 NC_017999.1 2025852 2027699 R COG1132:ABC-type multidrug transport system, ATPaseand permease components; ABC transporter ATP-binding protein complement(2025852..2027699) Bifidobacterium bifidum BGN4 13069327 YP_006395172.1 CDS BBB_1703 NC_017999.1 2027726 2029483 R COG1132:ABC-type multidrug transport system, ATPaseand permease components; ABC transporter ATP-binding protein complement(2027726..2029483) Bifidobacterium bifidum BGN4 13069328 YP_006395173.1 CDS BBB_1704 NC_017999.1 2029587 2030111 R COG1846:Transcriptional regulators; putative MarR family transcriptional regulator complement(2029587..2030111) Bifidobacterium bifidum BGN4 13069329 YP_006395174.1 CDS BBB_1705 NC_017999.1 2030503 2030697 R putative transposase complement(2030503..2030697) Bifidobacterium bifidum BGN4 13069330 YP_006395175.1 CDS BBB_1706 NC_017999.1 2030889 2032436 R putative cell surface protein complement(2030889..2032436) Bifidobacterium bifidum BGN4 13069331 YP_006395176.1 CDS BBB_1707 NC_017999.1 2032450 2032578 R hypothetical protein complement(2032450..2032578) Bifidobacterium bifidum BGN4 13069332 YP_006395177.1 CDS BBB_1708 NC_017999.1 2032645 2034981 R putative outer membrane protein complement(2032645..2034981) Bifidobacterium bifidum BGN4 13069333 YP_006395178.1 CDS srtA NC_017999.1 2034981 2035961 R COG3764:Sortase (surface protein transpeptidase); putative sortase complement(2034981..2035961) Bifidobacterium bifidum BGN4 13069334 YP_006395179.1 CDS yxeH NC_017999.1 2037389 2038237 R COG0561:Predicted hydrolases of the HADsuperfamily; HAD family hydrolase complement(2037389..2038237) Bifidobacterium bifidum BGN4 13069336 YP_006395180.1 CDS BBB_1711 NC_017999.1 2038369 2039655 R COG4905:Predicted membrane protein; transmembrane protein complement(2038369..2039655) Bifidobacterium bifidum BGN4 13069337 YP_006395181.1 CDS BBB_1712 NC_017999.1 2039659 2040315 R hypothetical protein complement(2039659..2040315) Bifidobacterium bifidum BGN4 13069338 YP_006395182.1 CDS BBB_1713 NC_017999.1 2040260 2040496 R COG0561:Predicted hydrolases of the HADsuperfamily; phosphoglycolate phosphatase complement(2040260..2040496) Bifidobacterium bifidum BGN4 13069339 YP_006395183.1 CDS bglA NC_017999.1 2040556 2041989 R COG2723:Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; 6-phospho-beta-glucosidase complement(2040556..2041989) Bifidobacterium bifidum BGN4 13069340 YP_006395184.1 CDS licA NC_017999.1 2042051 2042380 R COG1447:Phospho transferase systemcellobiose-specific component IIA; lichenan-specific phospho transferase enzyme IIA component complement(2042051..2042380) Bifidobacterium bifidum BGN4 13069341 YP_006395185.1 CDS chbB NC_017999.1 2042528 2042827 R COG1440:Phospho transferase systemcellobiose-specific component IIB; N, N'-diacetylchitobiose-specificphospho transferase enzyme IIB component complement(2042528..2042827) Bifidobacterium bifidum BGN4 13069342 YP_006395186.1 CDS licC NC_017999.1 2042958 2044298 R COG1455:Phospho transferase systemcellobiose-specific component IIC; lichenan permease IIC component complement(2042958..2044298) Bifidobacterium bifidum BGN4 13069343 YP_006395187.1 CDS BBB_1718 NC_017999.1 2044584 2045003 R COG0561:Predicted hydrolases of the HADsuperfamily; putative HAD superfamily hydrolase complement(2044584..2045003) Bifidobacterium bifidum BGN4 13069344 YP_006395188.1 CDS yydK NC_017999.1 2045277 2045984 R COG2188:Transcriptional regulators; putative HTH-type transcriptional regulator complement(2045277..2045984) Bifidobacterium bifidum BGN4 13069346 YP_006395189.1 CDS BBB_1720 NC_017999.1 2046213 2046791 R putative lipo protein complement(2046213..2046791) Bifidobacterium bifidum BGN4 13069347 YP_006395190.1 CDS macB NC_017999.1 2046784 2047584 R COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; macrolide export ATP-binding/permease complement(2046784..2047584) Bifidobacterium bifidum BGN4 13069348 YP_006395191.1 CDS BBB_1722 NC_017999.1 2047613 2048908 R COG0577:ABC-type antimicrobial peptide transportsystem, permease component; putative permease protein of ABC transportersystem complement(2047613..2048908) Bifidobacterium bifidum BGN4 13069349 YP_006395192.1 CDS BBB_1723 NC_017999.1 2048941 2050242 R COG0577:ABC-type antimicrobial peptide transportsystem, permease component; putative permease protein of ABC transportersystem complement(2048941..2050242) Bifidobacterium bifidum BGN4 13069350 YP_006395193.1 CDS BBB_1724 NC_017999.1 2050263 2051549 R COG4393:Predicted membrane protein; hypothetical protein complement(2050263..2051549) Bifidobacterium bifidum BGN4 13069351 YP_006395194.1 CDS tpd NC_017999.1 2051655 2052338 R COG3470:Uncharacterized protein probably involvedin high-affinity Fe2+ transport; Fe2+ high-affinity transport protein complement(2051655..2052338) Bifidobacterium bifidum BGN4 13069352 YP_006395195.1 CDS ywbL NC_017999.1 2052373 2054139 R COG0672:High-affinity Fe2+/Pb2+ permease; membrane protein complement(2052373..2054139) Bifidobacterium bifidum BGN4 13069353 YP_006395196.1 CDS melB NC_017999.1 2054380 2054568 R putative symporter complement(2054380..2054568) Bifidobacterium bifidum BGN4 13069354 YP_006395197.1 CDS BBB_1728 NC_017999.1 2054519 2054701 D hypothetical protein 2054519..2054701 Bifidobacterium bifidum BGN4 13069355 YP_006395198.1 CDS apbE NC_017999.1 2054741 2055784 D thiamine biosynthesis relatedmembrane-associated lipo protein 2054741..2055784 Bifidobacterium bifidum BGN4 13069356 YP_006395199.1 CDS fic NC_017999.1 2055836 2056504 R COG3177:Uncharacterized conserved protein; filamentation related protein complement(2055836..2056504) Bifidobacterium bifidum BGN4 13069357 YP_006395200.1 CDS ptsI NC_017999.1 2056997 2058655 R COG1080:Phosphoenolpyruvate- protein kinase (PTSsystem EI component in bacteria); phosphoenolpyruvate- protein phospho transferase complement(2056997..2058655) Bifidobacterium bifidum BGN4 13069358 YP_006395201.1 CDS ptsH NC_017999.1 2059010 2059270 D COG1925:Phospho transferase system, HPr- related proteins; phosphocarrier protein 2059010..2059270 Bifidobacterium bifidum BGN4 13069359 YP_006395202.1 CDS malR NC_017999.1 2059432 2060514 D COG1609:Transcriptional regulators; HTH-type transcriptional regulator 2059432..2060514 Bifidobacterium bifidum BGN4 13069360 YP_006395203.1 CDS dnaX NC_017999.1 2060525 2061709 R COG0470:ATPase involved in DNA replication; DNA polymerase III subunit gamma/tau complement(2060525..2061709) Bifidobacterium bifidum BGN4 13069361 YP_006395204.1 CDS tmk NC_017999.1 2061706 2062440 R COG0125:Thymidylate kinase; thymidylate kinase complement(2061706..2062440) Bifidobacterium bifidum BGN4 13069362 YP_006395205.1 CDS topA NC_017999.1 2062521 2065439 R COG0550:Topoisomerase IA; DNA topoisomerase complement(2062521..2065439) Bifidobacterium bifidum BGN4 13069363 YP_006395206.1 CDS BBB_1737 NC_017999.1 2065524 2066654 R putative pre-pilin peptidase complement(2065524..2066654) Bifidobacterium bifidum BGN4 13069364 YP_006395207.1 CDS vpr NC_017999.1 2067361 2071428 R COG1404:Subtilisin-like serine proteases; minor extracellular protease complement(2067361..2071428) Bifidobacterium bifidum BGN4 13069365 YP_006395208.1 CDS BBB_1739 NC_017999.1 2071950 2072861 D COG1272:Predicted membrane protein, hemolysin IIIhomolog; hypothetical protein 2071950..2072861 Bifidobacterium bifidum BGN4 13069366 YP_006395209.1 CDS glf NC_017999.1 2073071 2074237 D COG0562:UDP-galactopyranose mutase; UDP-galactopyranose mutase 2073071..2074237 Bifidobacterium bifidum BGN4 13069367 YP_006395210.1 CDS mrcA NC_017999.1 2074697 2077195 D COG0744:Membrane carboxypeptidase(penicillin-binding protein); penicillin-binding protein 2074697..2077195 Bifidobacterium bifidum BGN4 13069368 YP_006395211.1 CDS leuA NC_017999.1 2077364 2079274 R COG0119:Isopropylmalate/homocitrate/citramalatesynt hases; 2-isopropylmalate synthase complement(2077364..2079274) Bifidobacterium bifidum BGN4 13069369 YP_006395212.1 CDS BBB_1743 NC_017999.1 2079766 2081166 D COG1409:Predicted phosphohydrolases; putative phosphohydrolase 2079766..2081166 Bifidobacterium bifidum BGN4 13069370 YP_006395213.1 CDS BBB_1744 NC_017999.1 2081350 2081541 R hypothetical protein complement(2081350..2081541) Bifidobacterium bifidum BGN4 13069371 YP_006395214.1 CDS pknB NC_017999.1 2081814 2083742 R transmembrane serine/threonine- protein kinase B complement(2081814..2083742) Bifidobacterium bifidum BGN4 13069372 YP_006395215.1 CDS BBB_1746 NC_017999.1 2083954 2084574 R hypothetical protein complement(2083954..2084574) Bifidobacterium bifidum BGN4 13069373 YP_006395216.1 CDS asd NC_017999.1 2084743 2085837 D COG0136:Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 2084743..2085837 Bifidobacterium bifidum BGN4 13069374 YP_006395217.1 CDS BBB_1748 NC_017999.1 2085945 2086091 R hypothetical protein complement(2085945..2086091) Bifidobacterium bifidum BGN4 13069375 YP_006395218.1 CDS lysC NC_017999.1 2086243 2086785 R COG0527:Aspartokinases; aspartokinase complement(2086243..2086785) Bifidobacterium bifidum BGN4 13069376 YP_006395219.1 CDS ask NC_017999.1 2086880 2087644 R COG0527:Aspartokinases; aspartokinase complement(2086880..2087644) Bifidobacterium bifidum BGN4 13069377 YP_006395220.1 CDS recR NC_017999.1 2087833 2088435 R COG0353:Recombinational DNA repair protein (RecFpathway); recombination protein complement(2087833..2088435) Bifidobacterium bifidum BGN4 13069378 YP_006395221.1 CDS dnaX NC_017999.1 2088444 2091302 R COG2812:DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma/tau complement(2088444..2091302) Bifidobacterium bifidum BGN4 13069379 YP_006395222.1 CDS sphK NC_017999.1 2091493 2092611 R COG1597:Sphingosine kinase and enzymes related toeukaryotic diacylglycerol kinase; sphingosine kinase complement(2091493..2092611) Bifidobacterium bifidum BGN4 13069380 YP_006395223.1 CDS oppA NC_017999.1 2092723 2093070 R periplasmic oligopeptide binding lipo protein complement(2092723..2093070) Bifidobacterium bifidum BGN4 13069381 YP_006395224.1 CDS BBB_1755 NC_017999.1 2093395 2093673 R hypothetical protein complement(2093395..2093673) Bifidobacterium bifidum BGN4 13069382 YP_006395225.1 CDS BBB_1756 NC_017999.1 2093767 2094057 R hypothetical protein complement(2093767..2094057) Bifidobacterium bifidum BGN4 13069383 YP_006395226.1 CDS BBB_1757 NC_017999.1 2094262 2094636 R integral membrane protein complement(2094262..2094636) Bifidobacterium bifidum BGN4 13069384 YP_006395227.1 CDS tadB NC_017999.1 2094841 2095533 R protein secretion system or pilus assembly related protein complement(2094841..2095533) Bifidobacterium bifidum BGN4 13069385 YP_006395228.1 CDS ptlH NC_017999.1 2095571 2096566 R COG4962:Flp pilus assembly protein, ATPase CpaF; type IV secretion system protein complement(2095571..2096566) Bifidobacterium bifidum BGN4 13069386 YP_006395229.1 CDS BBB_1760 NC_017999.1 2096563 2097486 R hypothetical protein complement(2096563..2097486) Bifidobacterium bifidum BGN4 13069387 YP_006395230.1 CDS ppk NC_017999.1 2098873 2101110 D COG0855:Polyphosphate kinase; polyphosphate kinase 2098873..2101110 Bifidobacterium bifidum BGN4 13069388 YP_006395231.1 CDS mutT NC_017999.1 2101309 2102394 D COG0494:NTP pyrophosphohydrolases includingoxidative damage repair enzymes; nucleoside triphosphate pyrophosphohydrolase 2101309..2102394 Bifidobacterium bifidum BGN4 13069389 YP_006395232.1 CDS BBB_1763 NC_017999.1 2102396 2103136 D hypothetical protein 2102396..2103136 Bifidobacterium bifidum BGN4 13069390 YP_006395233.1 CDS BBB_1764 NC_017999.1 2103414 2103710 R cobalamin (Vitamin B12) biosynthesis protein complement(2103414..2103710) Bifidobacterium bifidum BGN4 13069391 YP_006395234.1 CDS BBB_1765 NC_017999.1 2103709 2104143 D hypothetical protein 2103709..2104143 Bifidobacterium bifidum BGN4 13069392 YP_006395235.1 CDS ywdF NC_017999.1 2104227 2105282 R COG1216:Predicted glycosyl transferases; glycosyl transferase family protein complement(2104227..2105282) Bifidobacterium bifidum BGN4 13069393 YP_006395236.1 CDS BBB_1767 NC_017999.1 2105438 2107336 R hypothetical protein complement(2105438..2107336) Bifidobacterium bifidum BGN4 13069394 YP_006395237.1 CDS BBB_1768 NC_017999.1 2107601 2107792 D hypothetical protein 2107601..2107792 Bifidobacterium bifidum BGN4 13069395 YP_006395238.1 CDS thiS NC_017999.1 2107841 2108035 D COG2104:Sulfur transfer protein involved inthiamine biosynthesis; thiamine biosynthesis protein 2107841..2108035 Bifidobacterium bifidum BGN4 13069396 YP_006395239.1 CDS thiG NC_017999.1 2108158 2109057 D COG2022:Uncharacterized enzyme of thiazolebiosynthesis; thiazole biosynthesis protein 2108158..2109057 Bifidobacterium bifidum BGN4 13069397 YP_006395240.1 CDS BBB_1771 NC_017999.1 2109181 2110860 R putative riboflavin-specific deaminase complement(2109181..2110860) Bifidobacterium bifidum BGN4 13069398 YP_006395241.1 CDS BBB_1772 NC_017999.1 2111195 2111398 D COG0463:Glycosyl transferases involved in cell wallbiogenesis; glycosyl transferase family protein 2111195..2111398 Bifidobacterium bifidum BGN4 13069399 YP_006395242.1 CDS BBB_1773 NC_017999.1 2111446 2113602 R methyl-accepting chemotaxis protein complement(2111446..2113602) Bifidobacterium bifidum BGN4 13069400 YP_006395243.1 CDS BBB_1774 NC_017999.1 2114083 2115516 D COG0577:ABC-type antimicrobial peptide transportsystem, permease component; SalY-type ABC antimicrobial peptide transportsystem permease component 2114083..2115516 Bifidobacterium bifidum BGN4 13069401 YP_006395244.1 CDS BBB_1775 NC_017999.1 2115513 2116832 D COG1136:ABC-type antimicrobial peptide transportsystem, ATPase component; putative ribose/galactose/methyl galactosideimport ATP-binding protein 2115513..2116832 Bifidobacterium bifidum BGN4 13069402 YP_006395245.1 CDS BBB_1776 NC_017999.1 2116910 2117656 R COG1418:Predicted HD superfamily hydrolase; metal dependent phosphohydrolase complement(2116910..2117656) Bifidobacterium bifidum BGN4 13069403 YP_006395246.1 CDS BBB_1777 NC_017999.1 2117860 2118726 R putative glutamine amido transferase complement(2117860..2118726) Bifidobacterium bifidum BGN4 13069404 YP_006395247.1 CDS BBB_1778 NC_017999.1 2119171 2119377 R hypothetical protein complement(2119171..2119377) Bifidobacterium bifidum BGN4 13069405 YP_006395248.1 CDS kup NC_017999.1 2119943 2122405 R COG3158:K+ transporter; putative potassium transport system protein complement(2119943..2122405) Bifidobacterium bifidum BGN4 13069406 YP_006395249.1 CDS tadD NC_017999.1 2122569 2123528 R COG0084:Mg-dependent DNase; sec-independent protein complement(2122569..2123528) Bifidobacterium bifidum BGN4 13069407 YP_006395250.1 CDS reg NC_017999.1 2123704 2124948 R COG2211:Na+/melibiose symporter and related transporters; HTH-type transcriptional regulator complement(2123704..2124948) Bifidobacterium bifidum BGN4 13069408 YP_006395251.1 CDS BBB_1782 NC_017999.1 2125091 2125210 D hypothetical protein 2125091..2125210 Bifidobacterium bifidum BGN4 13069409 YP_006395252.1 CDS BBB_1783 NC_017999.1 2125323 2125613 D putative solute-binding lipo protein 2125323..2125613 Bifidobacterium bifidum BGN4 13069410 YP_006395253.1 CDS BBB_1784 NC_017999.1 2126361 2126867 R hypothetical protein complement(2126361..2126867) Bifidobacterium bifidum BGN4 13069411 YP_006395254.1 CDS metG NC_017999.1 2127134 2128996 R COG0143:Methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(2127134..2128996) Bifidobacterium bifidum BGN4 13069412 YP_006395255.1 CDS BBB_1786 NC_017999.1 2129146 2129976 D hypothetical protein 2129146..2129976 Bifidobacterium bifidum BGN4 13069413 YP_006395256.1 CDS BBB_1787 NC_017999.1 2130087 2130518 D hypothetical protein 2130087..2130518 Bifidobacterium bifidum BGN4 13069414 YP_006395257.1 CDS BBB_1788 NC_017999.1 2130520 2131521 R COG0313:Predicted methyl transferases; putative methyl transferase complement(2130520..2131521) Bifidobacterium bifidum BGN4 13069415 YP_006395258.1 CDS dedA NC_017999.1 2131791 2132489 D COG0586:Uncharacterized membrane-associated protein; integral membrane protein 2131791..2132489 Bifidobacterium bifidum BGN4 13069416 YP_006395259.1 CDS yfbT NC_017999.1 2132984 2133691 R COG0637:Predicted phosphatase/phosphohexomutase; phosphatase complement(2132984..2133691) Bifidobacterium bifidum BGN4 13069418 YP_006395260.1 CDS nedA NC_017999.1 2134002 2139074 R COG4409:Neuraminidase (sialidase); sialidase complement(2134002..2139074) Bifidobacterium bifidum BGN4 13069419 YP_006395261.1 CDS nedA NC_017999.1 2139662 2142259 R COG4409:Neuraminidase (sialidase); sialidase complement(2139662..2142259) Bifidobacterium bifidum BGN4 13069420 YP_006395262.1 CDS hspR NC_017999.1 2142531 2143043 R COG0789:Predicted transcriptional regulators; putative heat shock protein complement(2142531..2143043) Bifidobacterium bifidum BGN4 13069421 YP_006395263.1 CDS dnaJ NC_017999.1 2143137 2144144 R COG0484:DnaJ-class molecular chaperone withC-terminal Zn finger domain; chaperone protein complement(2143137..2144144) Bifidobacterium bifidum BGN4 13069422 YP_006395264.1 CDS grpE NC_017999.1 2144564 2145268 R COG0576:Molecular chaperone GrpE (heat shock protein); chaperone complement(2144564..2145268) Bifidobacterium bifidum BGN4 13069423 YP_006395265.1 CDS dnaK NC_017999.1 2145271 2147154 R COG0443:Molecular chaperone; chaperone protein complement(2145271..2147154) Bifidobacterium bifidum BGN4 13069424 YP_006395266.1 CDS phoA NC_017999.1 2147531 2149663 R COG1785:Alkaline phosphatase; alkaline phosphatase complement(2147531..2149663) Bifidobacterium bifidum BGN4 13069425 YP_006395267.1 CDS regA NC_017999.1 2149996 2151018 D COG1609:Transcriptional regulators; HTH-type transcriptional regulator 2149996..2151018 Bifidobacterium bifidum BGN4 13069426 YP_006395268.1 CDS BBB_1799 NC_017999.1 2151026 2151154 R hypothetical protein complement(2151026..2151154) Bifidobacterium bifidum BGN4 13069428 YP_006395269.1 CDS BBB_1800 NC_017999.1 2151180 2151356 R hypothetical protein complement(2151180..2151356) Bifidobacterium bifidum BGN4 13069429 YP_006395270.1 CDS phoE NC_017999.1 2151362 2152051 R COG0406:Fructose-2,6-bisphosphatase; putative phosphoglycerate mutase complement(2151362..2152051) Bifidobacterium bifidum BGN4 13069430 YP_006395271.1 CDS BBB_1802 NC_017999.1 2152100 2152552 D hypothetical protein 2152100..2152552 Bifidobacterium bifidum BGN4 13069431 YP_006395272.1 CDS nfrA NC_017999.1 2152811 2153590 D COG0778:Nitroreductase; NADPH-dependent oxidoreductase 2152811..2153590 Bifidobacterium bifidum BGN4 13069432 YP_006395273.1 CDS BBB_1804 NC_017999.1 2153723 2153974 R hypothetical protein complement(2153723..2153974) Bifidobacterium bifidum BGN4 13069433 YP_006395274.1 CDS ymdC NC_017999.1 2160092 2160883 D COG3231:Aminoglycoside phospho transferase; putative aminoglycoside 3'-phospho transferase 2160092..2160883 Bifidobacterium bifidum BGN4 13069437 YP_006395275.1 CDS npdA NC_017999.1 2167058 2167810 D COG0846:NAD-dependent protein deacetylases, SIR2family; NAD-dependent deacetylase 2167058..2167810 Bifidobacterium bifidum BGN4 13069441 YP_006395276.1 CDS ilvA NC_017999.1 2167973 2169238 R COG1171:Threonine dehydratase; threonine dehydratase complement(2167973..2169238) Bifidobacterium bifidum BGN4 13069442 YP_006395277.1 CDS cumB NC_017999.1 2169495 2169947 R COG0590:Cytosine/adenosine deaminases; putative cytidine and deoxycytidylate deaminase complement(2169495..2169947) Bifidobacterium bifidum BGN4 13069443 YP_006395278.1 CDS BBB_1809 NC_017999.1 2170105 2170851 D COG0400:Predicted esterase; putative phospholipase/carboxylesterase 2170105..2170851 Bifidobacterium bifidum BGN4 13069445 YP_006395279.1 CDS yjcE NC_017999.1 2170885 2172954 R COG0025:NhaP-type Na+/H+ and K+/H+ antiporters; putative Na(+)/H(+) exchanger complement(2170885..2172954) Bifidobacterium bifidum BGN4 13069447 YP_006395280.1 CDS dcd NC_017999.1 2173331 2173912 D COG0717:Deoxycytidine deaminase; deoxycytidine triphosphate deaminase 2173331..2173912 Bifidobacterium bifidum BGN4 13069449 YP_006395281.1 CDS rafA NC_017999.1 2174004 2176283 R COG3345:Alpha-galactosidase; alpha-galactosidase complement(2174004..2176283) Bifidobacterium bifidum BGN4 13069450 YP_006395282.1 CDS pacL NC_017999.1 2176450 2179401 R COG0474:Cation transport ATPase; cation-transporting ATPase complement(2176450..2179401) Bifidobacterium bifidum BGN4 13069452 YP_006395283.1 CDS BBB_1814 NC_017999.1 2179612 2179728 R hypothetical protein complement(2179612..2179728) Bifidobacterium bifidum BGN4 13069454 YP_006395284.1 CDS BBB_1815 NC_017999.1 2180031 2181029 D COG0566:rRNA methylases; putativetRNA/rRNA methyl transferase 2180031..2181029 Bifidobacterium bifidum BGN4 13069456 YP_006395285.1 CDS BBB_1816 NC_017999.1 2181143 2182558 R lipopolysaccharide kinase complement(2181143..2182558) Bifidobacterium bifidum BGN4 13069457 YP_006395286.1 CDS BBB_1817 NC_017999.1 2182549 2183358 R hypothetical protein complement(2182549..2183358) Bifidobacterium bifidum BGN4 13069458 YP_006395287.1 CDS srtA NC_017999.1 2183393 2184376 R COG3764:Sortase (surface protein transpeptidase); sortase (surface protein transpeptidase) complement(2183393..2184376) Bifidobacterium bifidum BGN4 13069459 YP_006395288.1 CDS BBB_1819 NC_017999.1 2184457 2186061 R trypsin-resistant surface T6 protein complement(2184457..2186061) Bifidobacterium bifidum BGN4 13069460 YP_006395289.1 CDS BBB_1820 NC_017999.1 2186126 2193835 R COG3210:Large exo proteins involved in hemeutilization or adhesion; putative cell surface protein complement(2186126..2193835) Bifidobacterium bifidum BGN4 13069461 YP_006395290.1 CDS BBB_1821 NC_017999.1 2194451 2195002 D COG2826:Transposase and inactivatedderivatives, IS30 family; transposase for insertion sequence elementIS1086 2194451..2195002 Bifidobacterium bifidum BGN4 13069462 YP_006395291.1 CDS msmX NC_017999.1 2195190 2196317 R COG3839:ABC-type sugar transport systems, ATPase components; putative multiple sugar-binding transportATP-binding protein complement(2195190..2196317) Bifidobacterium bifidum BGN4 13069463 YP_006395292.1 CDS BBB_1823 NC_017999.1 2196771 2197892 R CTP synthase complement(2196771..2197892) Bifidobacterium bifidum BGN4 13069464 YP_006395293.1 CDS pkwA NC_017999.1 2198188 2200659 D COG0515:Serine/threonine protein kinase; putative serine/threonine- protein kinase 2198188..2200659 Bifidobacterium bifidum BGN4 13069465 YP_006395294.1 CDS BBB_1825 NC_017999.1 2200810 2201784 D COG1651: protein-disulfide isomerase; DSBA oxidoreductase 2200810..2201784 Bifidobacterium bifidum BGN4 13069466 YP_006395295.1 CDS BBB_1826 NC_017999.1 2202402 2203898 D COG3583:Uncharacterized protein conserved inbacteria; hypothetical protein 2202402..2203898 Bifidobacterium bifidum BGN4 13069468 YP_006395296.1 CDS ksgA NC_017999.1 2203910 2204860 D COG0030:Dimethyladenosine transferase (rRNAmethylation); dimethyladenosine transferase 2203910..2204860 Bifidobacterium bifidum BGN4 13069469 YP_006395297.1 CDS ispE NC_017999.1 2204857 2205897 D COG1947:4-diphosphocytidyl-2C-methyl-D-erythritol2- phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2204857..2205897 Bifidobacterium bifidum BGN4 13069470 YP_006395298.1 CDS BBB_1829 NC_017999.1 2205939 2206565 D hypothetical protein 2205939..2206565 Bifidobacterium bifidum BGN4 13069471 YP_006395299.1 CDS BBB_1830 NC_017999.1 2206657 2208069 R COG0617:tRNA nucleotidyl transferase/poly(A)polymerase; tRNA adenylyl transferase complement(2206657..2208069) Bifidobacterium bifidum BGN4 13069472 YP_006395300.1 CDS BBB_1831 NC_017999.1 2208161 2208814 D COG0494:NTP pyrophosphohydrolases includingoxidative damage repair enzymes; NTP pyrophosphohydrolase 2208161..2208814 Bifidobacterium bifidum BGN4 13069473 YP_006395301.1 CDS BBB_1832 NC_017999.1 2208811 2211090 D hypothetical protein 2208811..2211090 Bifidobacterium bifidum BGN4 13069474 YP_006395302.1 CDS mviN NC_017999.1 2211087 2215517 D COG0728:Uncharacterized membrane protein, putativevirulence factor; putative virulence factor protein 2211087..2215517 Bifidobacterium bifidum BGN4 13069475 YP_006395303.1 CDS trxB NC_017999.1 2215710 2216876 D COG0492:Thioredoxin reductase; thioredoxin-disulfide reductase 2215710..2216876 Bifidobacterium bifidum BGN4 13069476 YP_006395304.1 CDS parB NC_017999.1 2217344 2218708 R COG1475:Predicted transcriptional regulators; putative chromosome-partitioning protein complement(2217344..2218708) Bifidobacterium bifidum BGN4 13069477 YP_006395305.1 CDS soj NC_017999.1 2218712 2219695 R COG1192:ATPases involved in chromosomepartitioning; sporulation initiation inhibitor protein complement(2218712..2219695) Bifidobacterium bifidum BGN4 13069478 YP_006395306.1 CDS gidB NC_017999.1 2220158 2220856 R COG0357:Predicted S-adenosylmethionine-dependentmethyl transferase involved in bacterial cell division; methyl transferase complement(2220158..2220856) Bifidobacterium bifidum BGN4 13069479 YP_006395307.1 CDS jag NC_017999.1 2220853 2221383 R COG1847:Predicted RNA-binding protein; putative RNA-binding protein complement(2220853..2221383) Bifidobacterium bifidum BGN4 13069480 YP_006395308.1 CDS oxaA NC_017999.1 2221465 2222475 R COG0706:Pre protein translocase subunit YidC; membrane protein complement(2221465..2222475) Bifidobacterium bifidum BGN4 13069481 YP_006395309.1 CDS BBB_1840 NC_017999.1 2222475 2222591 R hypothetical protein complement(2222475..2222591) Bifidobacterium bifidum BGN4 13069482 YP_006395310.1 CDS rnpA NC_017999.1 2222784 2223155 R ribonuclease P protein component complement(2222784..2223155) Bifidobacterium bifidum BGN4 13069483 YP_006395311.1 CDS rpmH NC_017999.1 2223178 2223312 R COG0230:Ribosomal protein L34; 50S ribosomal protein L34 complement(2223178..2223312) Bifidobacterium bifidum BGN4 13069484 BBB_t0001 tRNA BBB_t0001 NC_017999.1 26320 26392 R tRNA-Ala complement(26320..26392) Bifidobacterium bifidum BGN4 13070529 BBB_t0002 tRNA BBB_t0002 NC_017999.1 26463 26536 R tRNA-Ile complement(26463..26536) Bifidobacterium bifidum BGN4 13070530 BBB_t0003 tRNA BBB_t0003 NC_017999.1 139466 139551 R tRNA-Leu complement(139466..139551) Bifidobacterium bifidum BGN4 13070626 BBB_t0004 tRNA BBB_t0004 NC_017999.1 148656 148729 D tRNA-Gly 148656..148729 Bifidobacterium bifidum BGN4 13070632 BBB_t0005 tRNA BBB_t0005 NC_017999.1 200558 200645 R tRNA-Ser complement(200558..200645) Bifidobacterium bifidum BGN4 13070172 BBB_t0006 tRNA BBB_t0006 NC_017999.1 232522 232597 D tRNA-Glu 232522..232597 Bifidobacterium bifidum BGN4 13070194 BBB_t0007 tRNA BBB_t0007 NC_017999.1 232638 232712 D tRNA-Gln 232638..232712 Bifidobacterium bifidum BGN4 13070195 BBB_t0008 tRNA BBB_t0008 NC_017999.1 257763 257838 D tRNA-Arg 257763..257838 Bifidobacterium bifidum BGN4 13070216 BBB_t0009 tRNA BBB_t0009 NC_017999.1 292985 293060 D tRNA-Trp 292985..293060 Bifidobacterium bifidum BGN4 13070247 BBB_t0010 tRNA BBB_t0010 NC_017999.1 316830 316906 R tRNA-Lys complement(316830..316906) Bifidobacterium bifidum BGN4 13070268 BBB_t0011 tRNA BBB_t0011 NC_017999.1 345917 345989 D tRNA-Gly 345917..345989 Bifidobacterium bifidum BGN4 13070292 BBB_t0012 tRNA BBB_t0012 NC_017999.1 346038 346109 D tRNA-Val 346038..346109 Bifidobacterium bifidum BGN4 13070293 BBB_t0013 tRNA BBB_t0013 NC_017999.1 346140 346212 D tRNA-Val 346140..346212 Bifidobacterium bifidum BGN4 13070294 BBB_t0014 tRNA BBB_t0014 NC_017999.1 346237 346309 D tRNA-Ala 346237..346309 Bifidobacterium bifidum BGN4 13070295 BBB_t0015 tRNA BBB_t0015 NC_017999.1 397650 397730 R tRNA-Leu complement(397650..397730) Bifidobacterium bifidum BGN4 13070346 BBB_t0016 tRNA BBB_t0016 NC_017999.1 397788 397863 R tRNA-Thr complement(397788..397863) Bifidobacterium bifidum BGN4 13070347 BBB_t0017 tRNA BBB_t0017 NC_017999.1 529024 529099 R tRNA-Arg complement(529024..529099) Bifidobacterium bifidum BGN4 13070443 BBB_t0018 tRNA BBB_t0018 NC_017999.1 600354 600427 R tRNA-Val complement(600354..600427) Bifidobacterium bifidum BGN4 13070498 BBB_t0019 tRNA BBB_t0019 NC_017999.1 866281 866364 D tRNA-Leu 866281..866364 Bifidobacterium bifidum BGN4 13069694 BBB_t0020 tRNA BBB_t0020 NC_017999.1 904553 904626 D tRNA-Leu 904553..904626 Bifidobacterium bifidum BGN4 13069730 BBB_t0021 tRNA BBB_t0021 NC_017999.1 914084 914160 D tRNA-Pro 914084..914160 Bifidobacterium bifidum BGN4 13069737 BBB_t0022 tRNA BBB_t0022 NC_017999.1 994605 994695 R tRNA-Leu complement(994605..994695) Bifidobacterium bifidum BGN4 13069812 BBB_t0023 tRNA BBB_t0023 NC_017999.1 1094156 1094232 R tRNA-Pro complement(1094156..1094232) Bifidobacterium bifidum BGN4 13068773 BBB_t0024 tRNA BBB_t0024 NC_017999.1 1137919 1137994 R tRNA-Gly complement(1137919..1137994) Bifidobacterium bifidum BGN4 13068816 BBB_t0025 tRNA BBB_t0025 NC_017999.1 1138018 1138093 R tRNA-Val complement(1138018..1138093) Bifidobacterium bifidum BGN4 13068817 BBB_t0026 tRNA BBB_t0026 NC_017999.1 1140208 1140282 R tRNA-Val complement(1140208..1140282) Bifidobacterium bifidum BGN4 13068819 BBB_t0027 tRNA BBB_t0027 NC_017999.1 1140336 1140406 R tRNA-Cys complement(1140336..1140406) Bifidobacterium bifidum BGN4 13068820 BBB_t0028 tRNA BBB_t0028 NC_017999.1 1140433 1140508 R tRNA-Gly complement(1140433..1140508) Bifidobacterium bifidum BGN4 13068821 BBB_t0029 tRNA BBB_t0029 NC_017999.1 1208125 1208200 R tRNA-Asn complement(1208125..1208200) Bifidobacterium bifidum BGN4 13068881 BBB_t0030 tRNA BBB_t0030 NC_017999.1 1249997 1250069 D tRNA-Ala 1249997..1250069 Bifidobacterium bifidum BGN4 13068924 BBB_t0031 tRNA BBB_t0031 NC_017999.1 1254909 1254979 R tRNA-Gln complement(1254909..1254979) Bifidobacterium bifidum BGN4 13068930 BBB_t0032 tRNA BBB_t0032 NC_017999.1 1374844 1374920 R tRNA-Arg complement(1374844..1374920) Bifidobacterium bifidum BGN4 13069041 BBB_t0033 tRNA BBB_t0033 NC_017999.1 1374967 1375043 R tRNA-Arg complement(1374967..1375043) Bifidobacterium bifidum BGN4 13069042 BBB_t0034 tRNA BBB_t0034 NC_017999.1 1519419 1519494 R tRNA-His complement(1519419..1519494) Bifidobacterium bifidum BGN4 13069912 BBB_t0035 tRNA BBB_t0035 NC_017999.1 1561918 1561991 R tRNA-Arg complement(1561918..1561991) Bifidobacterium bifidum BGN4 13069948 BBB_t0036 tRNA BBB_t0036 NC_017999.1 1648751 1648824 R tRNA-Met complement(1648751..1648824) Bifidobacterium bifidum BGN4 13070019 BBB_t0037 tRNA BBB_t0037 NC_017999.1 1675274 1675347 R tRNA-Asp complement(1675274..1675347) Bifidobacterium bifidum BGN4 13070045 BBB_t0038 tRNA BBB_t0038 NC_017999.1 1705649 1705724 R tRNA-Phe complement(1705649..1705724) Bifidobacterium bifidum BGN4 13070073 BBB_t0039 tRNA BBB_t0039 NC_017999.1 1705769 1705842 R tRNA-Asp complement(1705769..1705842) Bifidobacterium bifidum BGN4 13070074 BBB_t0040 tRNA BBB_t0040 NC_017999.1 1709183 1709254 D tRNA-Glu 1709183..1709254 Bifidobacterium bifidum BGN4 13070079 BBB_t0041 tRNA BBB_t0041 NC_017999.1 1745715 1745791 D tRNA-Pro 1745715..1745791 Bifidobacterium bifidum BGN4 13070118 BBB_t0042 tRNA BBB_t0042 NC_017999.1 1768994 1769078 R tRNA-Ser complement(1768994..1769078) Bifidobacterium bifidum BGN4 13070133 BBB_t0043 tRNA BBB_t0043 NC_017999.1 1807038 1807125 R tRNA-Ser complement(1807038..1807125) Bifidobacterium bifidum BGN4 13070155 BBB_t0044 tRNA BBB_t0044 NC_017999.1 1848790 1848880 R tRNA-Ser complement(1848790..1848880) Bifidobacterium bifidum BGN4 13069171 BBB_t0045 tRNA BBB_t0045 NC_017999.1 1853787 1853863 R tRNA-Met complement(1853787..1853863) Bifidobacterium bifidum BGN4 13069177 BBB_t0046 tRNA BBB_t0046 NC_017999.1 1853868 1853939 R tRNA-Thr complement(1853868..1853939) Bifidobacterium bifidum BGN4 13069178 BBB_t0047 tRNA BBB_t0047 NC_017999.1 1853941 1854022 R tRNA-Tyr complement(1853941..1854022) Bifidobacterium bifidum BGN4 13069179 BBB_t0048 tRNA BBB_t0048 NC_017999.1 1919785 1919858 R tRNA-Gly complement(1919785..1919858) Bifidobacterium bifidum BGN4 13069233 BBB_t0049 tRNA BBB_t0049 NC_017999.1 1950298 1950374 D tRNA-Met 1950298..1950374 Bifidobacterium bifidum BGN4 13069255 BBB_t0050 tRNA BBB_t0050 NC_017999.1 2037006 2037078 R tRNA-Lys complement(2037006..2037078) Bifidobacterium bifidum BGN4 13069335 BBB_t0051 tRNA BBB_t0051 NC_017999.1 2132699 2132774 D tRNA-Ala 2132699..2132774 Bifidobacterium bifidum BGN4 13069417 BBB_t0052 tRNA BBB_t0052 NC_017999.1 2201974 2202047 D tRNA-Thr 2201974..2202047 Bifidobacterium bifidum BGN4 13069467 BBB_r0001 rRNA BBB_r0001 NC_017999.1 1579795 1579914 R 5S ribosomal RNA complement(1579795..1579914) Bifidobacterium bifidum BGN4 13069963 BBB_r0002 rRNA BBB_r0002 NC_017999.1 1580099 1583137 R 23S ribosomal RNA complement(1580099..1583137) Bifidobacterium bifidum BGN4 13069964 BBB_r0003 rRNA BBB_r0003 NC_017999.1 1583595 1585127 R 16S ribosomal RNA complement(1583595..1585127) Bifidobacterium bifidum BGN4 13069965 BBB_r0004 rRNA BBB_r0004 NC_017999.1 2154087 2154206 R 5S ribosomal RNA complement(2154087..2154206) Bifidobacterium bifidum BGN4 13069434 BBB_r0005 rRNA BBB_r0005 NC_017999.1 2154391 2157429 R 23S ribosomal RNA complement(2154391..2157429) Bifidobacterium bifidum BGN4 13069435 BBB_r0006 rRNA BBB_r0006 NC_017999.1 2157887 2159419 R 16S ribosomal RNA complement(2157887..2159419) Bifidobacterium bifidum BGN4 13069436 BBB_r0007 rRNA BBB_r0007 NC_017999.1 2161209 2161328 R 5S ribosomal RNA complement(2161209..2161328) Bifidobacterium bifidum BGN4 13069438 BBB_r0008 rRNA BBB_r0008 NC_017999.1 2161511 2164549 R 23S ribosomal RNA complement(2161511..2164549) Bifidobacterium bifidum BGN4 13069439 BBB_r0009 rRNA BBB_r0009 NC_017999.1 2165007 2166538 R 16S ribosomal RNA complement(2165007..2166538) Bifidobacterium bifidum BGN4 13069440