-- dump date 20240506_031125 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP027231.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP027231.1.REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. DewhirstREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The ForsythREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA.REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available.REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v.REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformansREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220xREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBioREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 36 of 83REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 36 of 83 Pseudo Genes (incomplete) :: 53 of 83REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 36 of 83 Pseudo Genes (incomplete) :: 53 of 83 Pseudo Genes (internal stop) :: 9 of 83REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 36 of 83 Pseudo Genes (incomplete) :: 53 of 83 Pseudo Genes (internal stop) :: 9 of 83 Pseudo Genes (multiple problems) :: 15 of 83REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 36 of 83 Pseudo Genes (incomplete) :: 53 of 83 Pseudo Genes (internal stop) :: 9 of 83 Pseudo Genes (multiple problems) :: 15 of 83 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 36 of 83 Pseudo Genes (incomplete) :: 53 of 83 Pseudo Genes (internal stop) :: 9 of 83 Pseudo Genes (multiple problems) :: 15 of 83 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP027231.1. Source DNA and bacterial cultures: M. E. Murnane and F. E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p5.167094 Assembly Name :: ATCC_33285_Bacteroides_zoogleoformans Genome Coverage :: 220x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/21/2023 02:59:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,778 CDSs (total) :: 2,702 Genes (coding) :: 2,619 CDSs (with protein) :: 2,619 Genes (RNA) :: 76 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 61 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 36 of 83 Pseudo Genes (incomplete) :: 53 of 83 Pseudo Genes (internal stop) :: 9 of 83 Pseudo Genes (multiple problems) :: 15 of 83 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.