-- dump date 20140619_000122 -- class Genbank::CDS -- table cds_note -- id note YP_005033916.1 Possible upstream alternative start codon YP_005033990.1 conserved hypothetical protein YP_005034001.1 possible downstream translational starts YP_005034003.1 Shows weak similarity to proteins involved in surface polysaccharide biosynthesis so may be a glycosyl transferase; conserved hypothetical protein YP_005034005.1 Weak similarity to glycosyl transferases YP_005034006.1 conserved hypothetical protein YP_005034021.1 conserved hypothetical protein YP_005034023.1 conserved hypothetical protein YP_005034025.1 Includes von Willebrand factor, type A domain and similarity to a Bacteroides protein associated with aerotolerance UniProt:Q9X4N3 YP_005034026.1 Includes von Willebrand factor, type A domain and similarity to a Bacteroides protein associated with aerotolerance UniProt:Q9X4N3 YP_005034067.1 conserved hypothetical protein YP_005034120.1 conserved hypothetical protein YP_005034179.1 conserved hypothetical protein YP_005034229.1 conserved hypothetical protein YP_005034230.1 conserved hypothetical protein YP_005034257.1 conserved hypothetical protein YP_005034259.1 conserved hypothetical protein YP_005034281.1 conserved hypothetical protein YP_005034307.1 conserved hypothetical protein YP_005034321.1 conserved hypothetical protein YP_005034343.1 conserved hypothetical protein YP_005034350.1 conserved hypothetical protein YP_005034374.1 conserved hypothetical protein YP_005034378.1 conserved hypothetical protein YP_005034393.1 conserved hypothetical protein YP_005034400.1 conserved hypothetical protein YP_005034402.1 conserved hypothetical protein YP_005034427.1 conserved hypothetical protein YP_005034429.1 conserved hypothetical protein YP_005034453.1 conserved hypothetical protein YP_005034469.1 conserved hypothetical protein YP_005034470.1 conserved hypothetical protein YP_005034475.1 conserved hypothetical protein YP_005034484.1 conserved hypothetical protein YP_005034489.1 conserved hypothetical protein YP_005034494.1 conserved hypothetical protein YP_005034518.1 conserved hypothetical protein YP_005034525.1 conserved hypothetical protein YP_005034526.1 conserved hypothetical protein YP_005034530.1 conserved hypothetical protein YP_005034544.1 conserved hypothetical protein YP_005034571.1 conserved hypothetical protein YP_005034593.1 conserved hypothetical protein YP_005034608.1 conserved hypothetical protein YP_005034622.1 conserved hypothetical protein YP_005034642.1 conserved hypothetical protein YP_005034648.1 conserved hypothetical protein YP_005034650.1 conserved hypothetical protein YP_005034656.1 conserved hypothetical protein YP_005034662.1 conserved hypothetical protein YP_005034664.1 conserved hypothetical protein YP_005034672.1 conserved hypothetical protein YP_005034678.1 conserved hypothetical protein YP_005034687.1 conserved hypothetical protein YP_005034695.1 conserved hypothetical protein YP_005034701.1 conserved hypothetical protein YP_005034711.1 conserved hypothetical protein YP_005034717.1 conserved hypothetical protein YP_005034723.1 conserved hypothetical protein YP_005034725.1 conserved hypothetical protein YP_005034742.1 conserved hypothetical protein YP_005034755.1 conserved hypothetical protein YP_005034758.1 conserved hypothetical protein YP_005034781.1 conserved hypothetical protein YP_005034788.1 conserved hypothetical protein YP_005034794.1 conserved hypothetical protein YP_005034796.1 conserved hypothetical protein YP_005034799.1 conserved hypothetical protein YP_005034808.1 conserved hypothetical protein YP_005034809.1 conserved hypothetical protein YP_005034811.1 conserved hypothetical protein YP_005034821.1 conserved hypothetical protein YP_005034828.1 conserved hypothetical protein YP_005034830.1 conserved hypothetical protein YP_005034839.1 conserved hypothetical protein YP_005034848.1 conserved hypothetical protein YP_005034852.1 conserved hypothetical protein YP_005034866.1 conserved hypothetical protein YP_005034871.1 conserved hypothetical protein YP_005034882.1 conserved hypothetical protein YP_005034897.1 conserved hypothetical protein YP_005034903.1 conserved hypothetical protein YP_005034914.1 conserved hypothetical protein YP_005034922.1 conserved hypothetical protein YP_005034923.1 conserved hypothetical protein YP_005034933.1 conserved hypothetical protein YP_005034939.1 conserved hypothetical protein YP_005034957.1 conserved hypothetical protein YP_005034971.1 conserved hypothetical protein YP_005034978.1 conserved hypothetical protein YP_005034989.1 conserved hypothetical protein YP_005034995.1 conserved hypothetical protein YP_005034996.1 conserved hypothetical protein YP_005034997.1 conserved hypothetical protein YP_005034998.1 conserved hypothetical protein YP_005034999.1 conserved hypothetical protein YP_005035001.1 conserved hypothetical protein YP_005035015.1 conserved hypothetical protein YP_005035023.1 conserved hypothetical protein YP_005035033.1 conserved hypothetical protein YP_005035034.1 conserved hypothetical protein YP_005035035.1 conserved hypothetical protein YP_005035053.1 conserved hypothetical protein YP_005035084.1 conserved hypothetical protein YP_005035087.1 conserved hypothetical protein YP_005035098.1 conserved hypothetical protein YP_005035137.1 conserved hypothetical protein YP_005035142.1 conserved hypothetical protein YP_005035148.1 conserved hypothetical protein YP_005035150.1 conserved hypothetical protein YP_005035161.1 conserved hypothetical protein YP_005035173.1 conserved hypothetical protein YP_005035208.1 conserved hypothetical protein YP_005035226.1 conserved hypothetical protein YP_005035247.1 conserved hypothetical protein YP_005035253.1 conserved hypothetical protein YP_005035257.1 conserved hypothetical protein YP_005035281.1 conserved hypothetical protein YP_005035283.1 conserved hypothetical protein YP_005035285.1 conserved hypothetical protein YP_005035315.1 conserved hypothetical protein YP_005035326.1 conserved hypothetical protein YP_005035334.1 conserved hypothetical protein YP_005035335.1 conserved hypothetical protein YP_005035352.1 conserved hypothetical protein YP_005035354.1 conserved hypothetical protein YP_005035367.1 conserved hypothetical protein YP_005035368.1 conserved hypothetical protein YP_005035401.1 conserved hypothetical protein YP_005035405.1 conserved hypothetical protein YP_005035406.1 conserved hypothetical protein YP_005035407.1 no significant database hits YP_005035408.1 conserved hypothetical protein YP_005035411.1 putative pilus assembly protein YP_005035412.1 Central part of protein is similar to Acinetobacter baumannii CsuD. UniProt:Q6XBY3 (EMBL:AY241696) (832 aa) fasta scores: E()=7.2e-15, 22.384% id in 688 aa, and to Vibrio vulnificus (strain YJ016) p pilus assembly protein, porin papc. UniProt:Q7MLA7 (EMBL:BA000037) (800 aa) fasta scores: E()=9.8e-27, 21.026% id in 799 aa YP_005035413.1 Similar to C-terminus of Vibrio vulnificus putative uncharacterized protein. putative uncharacterized protein. UniProt:Q8D966 (295 aa) fasta scores: E()=0.0023, 24.823% id in 141 aa; conserved hypothetical protein YP_005035418.1 C-terminus is similar to codons 130 to 1000 of Escherichia coli (strain K12) purL phosphoribosylformylglycinamidine synthase (ec 6.3.5.3) (fgam synthase) (fgams) (formylglycinamide ribotide amidotransferase) (fgarat) (formylglycinamide ribotide synthetase). UniProt:P15254 (1295 aa) fasta scores: E()=2.6e-08, 26.292% id in 890 aa, and similar to Bdellovibrio bacteriovorus purL phosphoribosylformylglycinamidine synthase ii (ec 6.3.5.3). UniProt:Q6MIZ0 (EMBL:BX842654) (1009 aa) fasta scores: E()=6.5e-130, 42.518% id in 969 aa YP_005035422.1 conserved hypothetical protein YP_005035430.1 Codons 330 to 2490 are similar to codons 125 to 2300 of Staphylococcus epidermidis (strain ATCC 12228) streptococcal hemagglutinin protein. UniProt:Q8CMU7 (EMBL:AE015929) (2310 aa) fasta scores: E()=1e-27, 19.603% id in 2168 aa, and codons 595 to 1830 are similar to codon 125 to codon 1370 of Rhodopirellula baltica probable surface-associated protein CshA. UniProt:Q7UY66 (EMBL:BX294134) (1543 aa) fasta scores: E()=6.7e-44, 25.792% id in 1295 aa YP_005035432.1 conserved hypothetical protein YP_005035434.1 conserved hypothetical protein YP_005035443.1 conserved hypothetical protein YP_005035450.1 conserved hypothetical protein YP_005035455.1 conserved hypothetical protein YP_005035456.1 Similar to C-terminus of Chlorobium tepidum menh thioesterase, menaquinone synthesis gene. UniProt:Q8KBE3 (EMBL:AE006470) (275 aa) fasta scores: E()=8.5e-20, 31.538% id in 260 aa. May be a fusion protein. YP_005035460.1 conserved hypothetical protein YP_005035461.1 Similar, but truncated at the N-terminus, to Myxococcus xanthus CsgA C-factor (C signal). UniProt:P21158 (EMBL:L27429) (166 aa) fasta scores: E()=2.6e-14, 36.774% id in 155 aa, and to Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni CsgA. UniProt:Q72RV4 (EMBL:AE016823) (222 aa) fasta scores: E()=4.6e-24, 41.558% id in 231 aa YP_005035464.1 conserved hypothetical protein YP_005035486.1 conserved hypothetical protein YP_005035493.1 conserved hypothetical protein YP_005035494.1 ribonucleotide-diphosphate reductase large chain YP_005035507.1 conserved hypothetical protein YP_005035510.1 Similar to Rhodopseudomonas palustris putative potassium channel protein rpa4233. UniProt:Q02006 (EMBL:BX572606) (412 aa) fasta scores: E()=1.2e-05, 20.057% id in 349 aa, and to Enterococcus faecalis (Streptococcus faecalis) ion transporter, putative. UniProt:Q830D3 (EMBL:AE016830) (242 aa) fasta scores: E()=2.6e-09, 26.336% id in 262 aa YP_005035516.1 Similar to C-terminus of Aquifex aeolicus putative uncharacterized protein. UniProt:O67789 (308 aa) fasta scores: E()=3.6e-07, 36.667% id in 90 aa; conserved hypothetical protein YP_005035519.1 Similar to Megasphaera elsdenii acyl-coa dehydrogenase, short-chain specific (ec 1.3.99.2) (scad) (butyryl-coa dehydrogenase) (bcad). UniProt:Q06319 (EMBL:L04528) (383 aa) fasta scores: E()=2.4e-20, 31.443% id in 388 aa, and to Leptospira interrogans acyl-coa dehydrogenase (ec 1.3.99.3). UniProt:Q8F2X4 (EMBL:AE010300) (586 aa) fasta scores: E()=1.7e-38, 31.903% id in 536 aa YP_005035520.1 conserved hypothetical protein YP_005035521.1 conserved hypothetical protein YP_005035522.1 conserved hypothetical protein YP_005035524.1 conserved hypothetical protein YP_005035527.1 C-terminus is similar to the C-terminus of Bdellovibrio bacteriovorus. putative uncharacterized protein precursor. UniProt:Q6MJV8 (EMBL:BX842653 (264 aa) fasta scores: E()=1.6e-06, 26.407% id in 231 aa; conserved hypothetical protein YP_005035530.1 C-terminus is similar to the C-terminus of Bdellovibrio bacteriovorus. putative cell surface protein precursor. UniProt:Q6MKJ0 (EMBL:BX842652 (913 aa) fasta scores: E()=2.8e-13, 25.632% id in 277 aa; conserved hypothetical protein YP_005035542.1 conserved hypothetical protein YP_005035546.1 conserved hypothetical protein YP_005035548.1 conserved hypothetical protein YP_005035564.1 conserved hypothetical protein YP_005035581.1 conserved hypothetical protein YP_005035584.1 conserved hypothetical protein YP_005035587.1 conserved hypothetical protein YP_005035588.1 conserved hypothetical protein YP_005035592.1 conserved hypothetical protein YP_005035593.1 conserved hypothetical protein YP_005035595.1 conserved hypothetical protein YP_005035596.1 conserved hypothetical protein YP_005035623.1 Codons 80 to the C-terminus are similar to N-terminus to codon 165 of Bordetella bronchiseptica (Alcaligenes bronchisepticus) Bph1 histone protein. UniProt:Q7WFA2 (EMBL:BX640450) (225 aa) fasta scores: E()=8.5e-10, 48.447% id in 161 aa; conserved hypothetical protein YP_005035624.1 conserved hypothetical protein YP_005035627.1 conserved hypothetical protein YP_005035629.1 conserved hypothetical protein YP_005035631.1 conserved hypothetical protein YP_005035632.1 conserved hypothetical protein YP_005035638.1 conserved hypothetical protein YP_005035639.1 conserved hypothetical protein YP_005035640.1 conserved hypothetical protein YP_005035647.1 conserved hypothetical protein YP_005035650.1 conserved hypothetical protein YP_005035679.1 conserved hypothetical protein YP_005035685.1 conserved hypothetical protein YP_005035690.1 conserved hypothetical protein YP_005035730.1 conserved hypothetical protein YP_005035745.1 conserved hypothetical protein YP_005035758.1 conserved hypothetical protein YP_005035774.1 conserved hypothetical protein YP_005035785.1 conserved hypothetical protein YP_005035786.1 conserved hypothetical protein YP_005035787.1 conserved hypothetical protein YP_005035798.1 conserved hypothetical protein YP_005035800.1 conserved hypothetical protein YP_005035833.1 conserved hypothetical protein YP_005035837.1 conserved hypothetical protein YP_005035855.1 conserved hypothetical protein YP_005035872.1 conserved hypothetical protein YP_005035879.1 conserved hypothetical protein YP_005035883.1 conserved hypothetical protein YP_005035894.1 conserved hypothetical protein YP_005035896.1 conserved hypothetical protein YP_005035900.1 conserved hypothetical protein YP_005035911.1 conserved hypothetical protein YP_005035913.1 conserved hypothetical protein YP_005035915.1 conserved hypothetical protein YP_005035918.1 conserved hypothetical protein YP_005035930.1 conserved hypothetical protein YP_005035933.1 conserved hypothetical protein YP_005035939.1 conserved hypothetical protein YP_005035940.1 conserved hypothetical protein YP_005035941.1 conserved hypothetical protein YP_005035945.1 conserved hypothetical protein YP_005035946.1 conserved hypothetical protein YP_005035961.1 low G+C content (35.09%) YP_005035965.1 conserved hypothetical protein YP_005035972.1 conserved hypothetical protein YP_005035983.1 conserved hypothetical protein YP_005035991.1 conserved hypothetical protein YP_005036007.1 conserved hypothetical protein YP_005036016.1 conserved hypothetical protein YP_005036025.1 conserved hypothetical protein YP_005036026.1 conserved hypothetical protein YP_005036029.1 conserved hypothetical protein YP_005036038.1 conserved hypothetical protein YP_005036039.1 conserved hypothetical protein YP_005036049.1 conserved hypothetical protein YP_005036051.1 conserved hypothetical protein YP_005036077.1 conserved hypothetical protein YP_005036085.1 conserved hypothetical protein YP_005036090.1 conserved hypothetical protein YP_005036091.1 conserved hypothetical protein YP_005036097.1 conserved hypothetical protein YP_005036104.1 conserved hypothetical protein YP_005036107.1 conserved hypothetical protein YP_005036108.1 conserved hypothetical protein YP_005036110.1 conserved hypothetical protein YP_005036111.1 conserved hypothetical protein YP_005036123.1 conserved hypothetical protein YP_005036129.1 Similar, but extended at the C-terminus, to Bdellovibrio bacteriovorus. putative uncharacterized protein precursor. UniProt:Q6MPG8 (EMBL:BX842648 (486 aa) fasta scores: E()=1.3e-25, 31.992% id in 472 aa; conserved hypothetical protein YP_005036156.1 conserved hypothetical protein YP_005036159.1 conserved hypothetical protein YP_005036169.1 conserved hypothetical protein YP_005036171.1 conserved hypothetical protein YP_005036182.1 conserved hypothetical protein YP_005036183.1 conserved hypothetical protein YP_005036185.1 conserved hypothetical protein YP_005036186.1 conserved hypothetical protein YP_005036188.1 conserved hypothetical protein YP_005036189.1 conserved hypothetical protein YP_005036229.1 conserved hypothetical protein YP_005036231.1 conserved hypothetical protein YP_005036232.1 conserved hypothetical protein YP_005036234.1 conserved hypothetical protein YP_005036238.1 conserved hypothetical protein YP_005036247.1 conserved hypothetical protein YP_005036249.1 conserved hypothetical protein YP_005036253.1 highly hidrophylic and coil-coiled YP_005036261.1 conserved hypothetical protein YP_005036264.1 conserved hypothetical protein YP_005036270.1 conserved hypothetical protein YP_005036280.1 conserved hypothetical protein YP_005036282.1 conserved hypothetical protein YP_005036297.1 conserved hypothetical protein YP_005036303.1 conserved hypothetical protein YP_005036321.1 conserved hypothetical protein YP_005036326.1 conserved hypothetical protein YP_005036338.1 conserved hypothetical protein YP_005036345.1 conserved hypothetical protein YP_005036350.1 conserved hypothetical protein YP_005036356.1 conserved hypothetical protein YP_005036358.1 conserved hypothetical protein YP_005036360.1 conserved hypothetical protein YP_005036362.1 conserved hypothetical protein YP_005036364.1 conserved hypothetical protein YP_005036371.1 conserved hypothetical protein YP_005036392.1 conserved hypothetical protein YP_005036395.1 conserved hypothetical protein YP_005036409.1 conserved hypothetical protein YP_005036418.1 conserved hypothetical protein YP_005036421.1 conserved hypothetical protein YP_005036478.1 conserved hypothetical protein YP_005036490.1 conserved hypothetical protein YP_005036495.1 conserved hypothetical protein YP_005036498.1 conserved hypothetical protein YP_005036512.1 conserved hypothetical protein YP_005036532.1 conserved hypothetical protein YP_005036536.1 conserved hypothetical protein YP_005036537.1 conserved hypothetical protein YP_005036548.1 conserved hypothetical protein YP_005036549.1 conserved hypothetical protein YP_005036550.1 conserved hypothetical protein YP_005036561.1 conserved hypothetical protein YP_005036562.1 conserved hypothetical protein YP_005036576.1 conserved hypothetical protein YP_005036581.1 conserved hypothetical protein YP_005036596.1 conserved hypothetical protein YP_005036607.1 conserved hypothetical protein YP_005036637.1 conserved hypothetical protein YP_005036649.1 conserved hypothetical protein YP_005036675.1 conserved hypothetical protein YP_005036676.1 conserved hypothetical protein YP_005036678.1 conserved hypothetical protein YP_005036687.1 conserved hypothetical protein YP_005036702.1 conserved hypothetical protein YP_005036703.1 conserved hypothetical protein YP_005036723.1 conserved hypothetical protein YP_005036736.1 conserved hypothetical protein YP_005036739.1 conserved hypothetical protein YP_005036753.1 conserved hypothetical protein YP_005036772.1 conserved hypothetical protein YP_005036777.1 conserved hypothetical protein YP_005036789.1 conserved hypothetical protein YP_005036790.1 conserved hypothetical protein YP_005036795.1 conserved hypothetical protein YP_005036796.1 conserved hypothetical protein YP_005036813.1 conserved hypothetical protein YP_005036832.1 conserved hypothetical protein YP_005036846.1 conserved hypothetical protein YP_005036856.1 conserved hypothetical protein YP_005036860.1 conserved hypothetical protein YP_005036861.1 Similar to C-terminus of Escherichia coli (strain K12) dxs 1-deoxy-d-xylulose-5-phosphate synthase (ec 2.2.1.7) (1-deoxyxylulose- 5-phosphate synthase) (dxp synthase) (dxps). UniProt:P77488 (619 aa) fasta scores: E()=3e-14, 28.195% id in 266 aa, and to entire Leptospira interrogans tktc1 transketolase c-terminal section (ec 2.2.1.1). UniProt:Q8F5T1 (EMBL:AE010300) (334 aa) fasta scores: E()=2.8e-47, 45.484% id in 310 aa YP_005036871.1 conserved hypothetical protein YP_005036884.1 conserved hypothetical protein YP_005036886.1 Similar to C-terminus of Bacillus stearothermophilus (Geobacillus stearothermophilus) PdhB pyruvate dehydrogenase E1 component subunit beta (ec 1.2.4.1). UniProt:P21874 (EMBL:X53560) (324 aa) fasta scores: E()=8.4e-39, 39.296% id in 341 aa YP_005036916.1 conserved hypothetical protein YP_005036921.1 conserved hypothetical protein YP_005036925.1 conserved hypothetical protein YP_005036930.1 conserved hypothetical protein YP_005036931.1 conserved hypothetical protein YP_005036952.1 conserved hypothetical protein YP_005036958.1 conserved hypothetical protein YP_005036961.1 conserved hypothetical protein YP_005036967.1 conserved hypothetical protein YP_005037034.1 conserved hypothetical protein YP_005037059.1 conserved hypothetical protein YP_005037060.1 conserved hypothetical protein YP_005037087.1 conserved hypothetical protein YP_005037102.1 conserved hypothetical protein YP_005037106.1 conserved hypothetical protein YP_005037111.1 conserved hypothetical protein YP_005037127.1 conserved hypothetical protein YP_005037137.1 conserved hypothetical protein YP_006954653.1 possesses rep-3 intiator replication protein domain