-- dump date 20140618_223414 -- class Genbank::CDS -- table cds_note -- id note YP_003698119.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: gur:Gura_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_003698120.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: glo:Glov_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_003698121.1 TIGRFAM: S4 domain protein YaaA; KEGG: glo:Glov_0173 S4 domain protein YaaA YP_003698122.1 KEGG: gur:Gura_0003 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_003698124.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: glo:Glov_0004 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein YP_003698125.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: gur:Gura_0005 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003698126.1 KEGG: sse:Ssed_1799 metal dependent phosphohydrolase domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003698128.1 PFAM: transcriptional regulator PadR family protein; KEGG: cvi:CV_3776 hypothetical protein YP_003698129.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: csa:Csal_1549 serine-type D-Ala-D-Ala carboxypeptidase YP_003698130.1 KEGG: apa:APP7_0616 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein YP_003698131.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dds:Ddes_1897 SNO glutamine amidotransferase YP_003698132.1 TIGRFAM: seryl-tRNA synthetase; KEGG: gme:Gmet_3528 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_003698133.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; SMART: AAA ATPase YP_003698134.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bja:blr1357 peptide ABC transporter ATP-binding protein; SMART: AAA ATPase YP_003698135.1 PFAM: extracellular solute-binding protein family 5; KEGG: pca:Pcar_1870 dipeptide transport protein YP_003698136.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3319 binding-protein-dependent transport systems inner membrane component YP_003698137.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sat:SYN_01342 oligopeptide transport system permease protein YP_003698138.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gem:GM21_3629 CMP/dCMP deaminase zinc-binding YP_003698140.1 SMART: AAA ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; KEGG: gbm:Gbem_0212 DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein YP_003698141.1 PFAM: conserved hypothetical protein; KEGG: dal:Dalk_1999 hypothetical protein YP_003698142.1 TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain protein; KEGG: ade:Adeh_3635 recombination protein RecR; SMART: Toprim sub domain protein YP_003698143.1 PFAM: Protein of unknown function DUF2508 YP_003698144.1 KEGG: hha:Hhal_1881 GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_003698145.1 KEGG: mxa:MXAN_6876 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_003698149.1 KEGG: CGLD25; hypothetical protein YP_003698150.1 PFAM: Orn/Lys/Arg decarboxylase major region; KEGG: Os03g0848100; hypothetical protein YP_003698151.1 TIGRFAM: thymidylate kinase; KEGG: dvm:DvMF_0023 dTMP kinase; PFAM: thymidylate kinase YP_003698152.1 PFAM: protein of unknown function DUF970 YP_003698153.1 KEGG: geo:Geob_2151 DNA polymerase III, delta prime subunit; TIGRFAM: DNA polymerase III, delta prime subunit YP_003698154.1 PFAM: PSP1 domain protein; KEGG: signal peptidase-like protein YP_003698155.1 PFAM: protein of unknown function DUF972 YP_003698156.1 PFAM: methyltransferase small; KEGG: dol:Dole_0543 methyltransferase small YP_003698157.1 KEGG: shm:Shewmr7_0131 excinuclease ABC subunit C; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein YP_003698158.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gur:Gura_3753 uroporphyrin-III C/tetrapyrrole methyltransferase YP_003698159.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003698160.1 KEGG: gsu:GSU2232 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein YP_003698161.1 KEGG: pca:Pcar_1695 Mg-dependent DNase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_003698162.1 PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: hypothetical protein YP_003698163.1 TIGRFAM: primase/topoisomerase like protein; KEGG: predicted protein YP_003698164.1 SMART: Ribosomal RNA adenine methylase transferase-like; TIGRFAM: dimethyladenosine transferase; KEGG: gme:Gmet_1304 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase YP_003698165.1 PFAM: protein of unknown function DUF1021 YP_003698166.1 KEGG: gme:Gmet_2849 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003698167.1 KEGG: pap:PSPA7_6072 xanthine phosphoribosyltransferase; TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase YP_003698168.1 PFAM: SpoVG family protein; KEGG: bba:Bd2801 regulatory protein SpoVG YP_003698169.1 KEGG: ppd:Ppro_0501 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein YP_003698170.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: gur:Gura_3682 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003698171.1 KEGG: dat:HRM2_16820 RplY; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_003698172.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: tcx:Tcr_0394 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003698173.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; KEGG: ppd:Ppro_0499 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_003698174.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: afw:Anae109_1483 integral membrane protein MviN YP_003698175.1 KEGG: geo:Geob_1879 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003698176.1 KEGG: afr:AFE_0164 S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003698177.1 PFAM: Septum formation initiator; KEGG: geo:Geob_2927 septum formation initiator YP_003698178.1 PFAM: RNA binding S1 domain protein; KEGG: S1 RNA binding domain containing protein YP_003698179.1 PFAM: protein of unknown function DUF1212; KEGG: prw:PsycPRwf_2002 hypothetical protein YP_003698180.1 KEGG: abu:Abu_0318 hypothetical protein YP_003698181.1 KEGG: sat:SYN_02776 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase YP_003698182.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: dps:DP0449 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003698183.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: pca:Pcar_0997 ATP-dependent zinc protease/cell division protein; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5 YP_003698184.1 KEGG: glo:Glov_1318 pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_003698185.1 PFAM: Hsp33 protein; KEGG: gme:Gmet_0041 HSP33-like chaperonin YP_003698186.1 KEGG: gsu:GSU2383 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003698187.1 KEGG: gur:Gura_1732 anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_003698188.1 PFAM: aminotransferase class IV; KEGG: hch:HCH_06836 branched-chain amino acid aminotransferase YP_003698189.1 TIGRFAM: dihydropteroate synthase; KEGG: geo:Geob_3422 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003698190.1 TIGRFAM: dihydroneopterin aldolase; KEGG: hypothetical protein ; K01633 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_003698191.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: pca:Pcar_0250 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_003698192.1 KEGG: fph:Fphi_1896 tRNA-dihydrouridine synthase; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; NADH:flavin oxidoreductase/NADH oxidase YP_003698193.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: gsu:GSU2271 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_003698194.1 PFAM: MgtC/SapB transporter; KEGG: pca:Pcar_1965 putative MgtC family protein YP_003698195.1 PFAM: Firmicute transcriptional repressor of class III stress genes YP_003698196.1 PFAM: UvrB/UvrC protein YP_003698197.1 PFAM: ATP:guanido phosphotransferase; KEGG: hypothetical protein YP_003698198.1 KEGG: CLPC; CLPC (HEAT SHOCK PROTEIN 93-V); ATP binding / ATPase; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase YP_003698199.1 KEGG: dal:Dalk_2956 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_003698200.1 PFAM: DNA integrity scanning, DisA, linker region; protein of unknown function DUF147; KEGG: sse:Ssed_0374 ERCC4 domain-containing protein YP_003698201.1 KEGG: sat:SYN_01402 hypothetical protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc YP_003698202.1 KEGG: ppd:Ppro_2969 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003698203.1 TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; KEGG: ppd:Ppro_0012 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003698204.1 KEGG: glutamyl-tRNA synthetase family protein ; K01885 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003698205.1 KEGG: glo:Glov_2614 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase YP_003698206.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: gme:Gmet_0057 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M) YP_003698207.1 KEGG: hypothetical protein; PFAM: ribonuclease III; SMART: ribonuclease III YP_003698208.1 KEGG: afw:Anae109_2230 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_003698209.1 PFAM: protein of unknown function DUF901; KEGG: hypothetical protein ; K06962 YP_003698210.1 KEGG: hip:CGSHiEE_09090 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003698211.1 KEGG: pfo:Pfl01_0184 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein YP_003698212.1 KEGG: hypothetical protein YP_003698213.1 KEGG: sfu:Sfum_1542 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_003698214.1 KEGG: dol:Dole_0696 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_003698215.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KEGG: cvi:CV_4198 transcription antitermination protein NusG; SMART: NGN domain protein YP_003698216.1 TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; KEGG: gur:Gura_1057 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_003698217.1 KEGG: gur:Gura_1058 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_003698218.1 PFAM: ribosomal protein L10; KEGG: rpf:Rpic12D_2969 ribosomal protein L10 YP_003698219.1 KEGG: vha:VIBHAR_00226 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_003698220.1 PFAM: methyltransferase small; putative RNA methylase; KEGG: tgr:Tgr7_2883 methyltransferase small YP_003698221.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; KEGG: similar to DNA-directed RNA polymerase beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain YP_003698222.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; KEGG: gme:Gmet_0620 DNA-directed RNA polymerase, subunit beta-prime; SMART: RNA polymerase I subunit A domain protein YP_003698224.1 KEGG: gem:GM21_3333 ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_003698225.1 KEGG: dvu:DVU1299 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_003698226.1 KEGG: gsu:GSU2860 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV YP_003698227.1 KEGG: nme:NMB0139 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein YP_003698229.1 KEGG: ank:AnaeK_1933 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_003698230.1 KEGG: glo:Glov_1346 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_003698231.1 PFAM: ribosomal protein L4/L1e; KEGG: sat:SYN_00986 50S ribosomal protein L4 YP_003698232.1 PFAM: Ribosomal protein L25/L23; KEGG: sfu:Sfum_1557 ribosomal protein L25/L23 YP_003698233.1 KEGG: glo:Glov_1349 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_003698234.1 KEGG: mmw:Mmwyl1_4272 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_003698235.1 KEGG: pca:Pcar_0706 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_003698236.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; KEGG: ppd:Ppro_0686 30S ribosomal protein S3; SMART: KH domain protein YP_003698237.1 KEGG: gsu:GSU2850 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_003698238.1 KEGG: pca:Pcar_0709 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_003698239.1 KEGG: prw:PsycPRwf_0435 ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_003698240.1 KEGG: abo:ABO_0407 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_003698241.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: rfe:RF_0289 50S ribosomal protein L24; SMART: KOW domain protein YP_003698242.1 PFAM: ribosomal protein L5; KEGG: gur:Gura_1078 50S ribosomal protein L5 YP_003698243.1 PFAM: ribosomal protein S14; KEGG: abu:Abu_0765 30S ribosomal protein S14 YP_003698244.1 PFAM: ribosomal protein S8; KEGG: ppd:Ppro_0694 30S ribosomal protein S8 YP_003698245.1 KEGG: bbt:BBta_5055 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_003698246.1 KEGG: dat:HRM2_36100 RplR; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_003698247.1 KEGG: pca:Pcar_0718 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein YP_003698248.1 KEGG: sat:SYN_01593 50S ribosomal protein L30P; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_003698249.1 KEGG: pca:Pcar_0720 ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15 YP_003698250.1 KEGG: sfu:Sfum_1576 adenylate kinases; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein YP_003698251.1 KEGG: pca:Pcar_0723 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003698253.1 KEGG: dps:DP1147 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003698254.1 KEGG: pca:Pcar_0724 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_003698255.1 KEGG: gme:Gmet_0650 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_003698256.1 KEGG: sfu:Sfum_1580 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_003698257.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; KEGG: gme:Gmet_0653 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003698258.1 KEGG: glo:Glov_1374 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_003698259.1 KEGG: sat:SYN_00209 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698260.1 KEGG: gsu:GSU1281 cobalt ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698261.1 PFAM: cobalt transport protein; KEGG: sat:SYN_00208 ABC-type cobalt transport system, permease component YP_003698262.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: gur:Gura_1048 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003698263.1 KEGG: mmw:Mmwyl1_2400 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_003698264.1 PFAM: ribosomal protein S9; KEGG: glo:Glov_3190 30S ribosomal protein S9 YP_003698265.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: neu:NE2190 integron/retron-type RNA-directed DNA polymerase YP_003698266.1 PFAM: band 7 protein; KEGG: hypothetical protein YP_003698267.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: ftn:FTN_0967 D-alanyl-D-alanine carboxypeptidase YP_003698268.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_C7286 NADH-flavin oxidoreductase/NADH oxidase YP_003698270.1 KEGG: maq:Maqu_3105 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding YP_003698271.1 PFAM: purine catabolism PurC domain protein; KEGG: reu:Reut_B5661 CdaR family transcriptional regulator YP_003698272.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: lhk:LHK_01306 xanthine/uracil/vitamin C permease YP_003698273.1 PFAM: isochorismatase hydrolase; KEGG: lhk:LHK_01309 isochorismatase hydrolase YP_003698274.1 KEGG: lhk:LHK_01305 xanthine/uracil/vitamin C permease YP_003698275.1 KEGG: lhk:LHK_00981 YlbF YP_003698276.1 PFAM: FdrA family protein; KEGG: ecd:ECDH10B_0307 acyl-CoA synthetase YP_003698277.1 PFAM: protein of unknown function DUF1116; KEGG: lhk:LHK_01303 DUF1116 domain containing protein YP_003698278.1 TIGRFAM: carbamate kinase; KEGG: eic:NT01EI_3529 carbamate kinase, putative; PFAM: aspartate/glutamate/uridylate kinase YP_003698279.1 PFAM: Bile acid:sodium symporter; KEGG: oan:Oant_1227 bile acid:sodium symporter YP_003698280.1 KEGG: dal:Dalk_0705 choline dehydrogenase; TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase YP_003698281.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pen:PSEEN2341 hypothetical protein YP_003698282.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_3169 substrate-binding region of ABC-type glycine betaine transport system YP_003698283.1 KEGG: rpf:Rpic12D_4272 hypothetical protein YP_003698284.1 KEGG: reu:Reut_B5835 aldehyde dehydrogenase (acceptor); TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003698285.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_0928 GCN5-related N-acetyltransferase YP_003698286.1 PFAM: Methyltransferase type 12; KEGG: mca:MCA2850 hypothetical protein YP_003698287.1 TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; KEGG: dps:DP2540 magnesium transporter; SMART: CBS domain containing protein YP_003698288.1 KEGG: mxa:MXAN_0609 PAP2 family protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003698289.1 KEGG: hch:HCH_04792 beta-glucanase/beta-glucan synthetase; PFAM: glycoside hydrolase family 16 YP_003698290.1 KEGG: oan:Oant_1457 hypothetical protein YP_003698291.1 KEGG: bmt:BSUIS_B1410 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003698292.1 KEGG: spl:Spea_0760 glucosamine-6-phosphate isomerase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase YP_003698293.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: ftf:FTF1168c N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3 YP_003698294.1 KEGG: mxa:MXAN_6161 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003698295.1 PFAM: YdjC family protein; KEGG: pmr:PMI2951 hypothetical protein YP_003698296.1 PFAM: glycoside hydrolase family 4; KEGG: vpa:VP2634 6-phospho-beta-glucosidase YP_003698297.1 TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: hsm:HSM_0456 PTS system lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003698298.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: efe:EFER_3959 putative chitobiose/cellobiose phosphotransferase enzyme IIA component YP_003698299.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: yen:YE1294 putative exported PTS system protein YP_003698300.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: oan:Oant_3124 ATPase BadF/BadG/BcrA/BcrD type YP_003698301.1 PFAM: conserved hypothetical protein; KEGG: mxa:MXAN_4187 hypothetical protein YP_003698302.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein; K01207 beta-N-acetylhexosaminidase YP_003698303.1 KEGG: plu:plu0403 N-acetylmuramic acid-6-phosphate etherase; TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS) YP_003698304.1 PFAM: extracellular solute-binding protein family 1; KEGG: dvm:DvMF_0656 extracellular solute-binding protein family 1 YP_003698305.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00316 sugar ABC transporter, permease protein YP_003698306.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xop:PXO_00882 L-arabinose transport system permease protein AraQ YP_003698307.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-N-acetylglucosaminidase, putative ; K01207 beta-N-acetylhexosaminidase YP_003698308.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: reh:H16_B1066 transcriptional regulator YP_003698309.1 PFAM: protein of unknown function UPF0075; KEGG: fph:Fphi_1362 anhydro-N-acetylmuramic acid kinase YP_003698310.1 PFAM: Rhomboid family protein; KEGG: abu:Abu_0593 rhomboid-like protein YP_003698312.1 KEGG: conserved hypothetical protein YP_003698313.1 KEGG: hsm:HSM_1619 type I restriction-modification system, M subunit; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase YP_003698314.1 PFAM: restriction modification system DNA specificity domain; KEGG: shn:Shewana3_4163 restriction modification system DNA specificity subunit YP_003698315.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; KEGG: hsm:HSM_1615 HsdR family type I site-specific deoxyribonuclease; SMART: DEAD-like helicase YP_003698319.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3633 transposase IS3/IS911 family protein YP_003698320.1 PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003698321.1 KEGG: hypothetical protein YP_003698322.1 KEGG: ppg:PputGB1_4757 protein of unknown function DUF900 hydrolase family protein YP_003698323.1 KEGG: ppg:PputGB1_4758 labile enterotoxin output A YP_003698324.1 PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: hpj:jhp0681 hypothetical protein YP_003698326.1 KEGG: midasin YP_003698327.1 KEGG: mxa:MXAN_4309 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein YP_003698328.1 KEGG: sfr:Sfri_1781 UspA domain-containing protein YP_003698330.1 KEGG: hypothetical protein YP_003698331.1 SMART: Nucleotide binding protein PINc; KEGG: aha:AHA_0872 PhoH family protein YP_003698333.1 KEGG: sat:SYN_02721 HD domain/HAMP domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region YP_003698336.1 PFAM: UspA domain protein; KEGG: atc:AGR_L_2094 two-component sensor KdpD YP_003698338.1 PFAM: transcriptional regulator PadR family protein YP_003698339.1 KEGG: hypothetical protein YP_003698345.1 KEGG: pap:PSPA7_1413 general secretion pathway protein G YP_003698346.1 KEGG: dal:Dalk_0621 protein of unknown function DUF323 YP_003698347.1 KEGG: pfl:PFL_0346 hypothetical protein YP_003698348.1 KEGG: hpa:HPAG1_0201 putative transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003698349.1 PFAM: protein of unknown function DUF1535; KEGG: par:Psyc_0189 hypothetical protein YP_003698350.1 KEGG: pfl:PFL_6025 hypothetical protein YP_003698351.1 PFAM: Protein of unknown function DUF2500; KEGG: hypothetical protein YP_003698352.1 KEGG: hypothetical protein YP_003698353.1 PFAM: protein of unknown function DUF214; KEGG: scl:sce1111 lipoprotein releasing system transmembrane protein LolC YP_003698354.1 KEGG: prw:PsycPRwf_0086 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698355.1 PFAM: sodium/glutamate symporter; KEGG: dal:Dalk_2099 sodium/glutamate symporter YP_003698356.1 KEGG: plu:plu3725 aminobenzoyl-glutamate utilization protein B; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_003698357.1 KEGG: dde:Dde_3030 hypothetical protein YP_003698358.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rlt:Rleg2_0700 CMP/dCMP deaminase zinc-binding YP_003698359.1 KEGG: bte:BTH_I2733 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003698362.1 PFAM: YibE/F family protein; KEGG: vha:VIBHAR_01199 hypothetical protein YP_003698363.1 PFAM: YibE/F family protein; KEGG: vha:VIBHAR_01199 hypothetical protein YP_003698364.1 KEGG: dde:Dde_0152 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003698365.1 PFAM: MMPL domain protein; KEGG: hypothetical protein YP_003698366.1 PFAM: alpha/beta hydrolase fold; KEGG: vap:Vapar_6338 alpha/beta hydrolase fold protein YP_003698367.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dvl:Dvul_0508 cobalamin synthesis protein, P47K YP_003698370.1 KEGG: dps:DP0608 hypothetical protein YP_003698371.1 KEGG: ppd:Ppro_2155 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_003698374.1 KEGG: mlo:mlr4660 hypothetical protein; PFAM: Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein YP_003698376.1 PFAM: FMN-binding domain protein; KEGG: son:SO_1419 hypothetical protein YP_003698377.1 PFAM: FMN-binding domain protein; KEGG: vha:VIBHAR_05539 oxidoreductase YP_003698378.1 PFAM: aldo/keto reductase; KEGG: mxa:MXAN_6482 aldo/keto reductase family oxidoreductase YP_003698380.1 KEGG: sbn:Sbal195_0632 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003698381.1 KEGG: psb:Psyr_2867 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003698382.1 PFAM: shikimate kinase; KEGG: Os06g0225800; hypothetical protein ; K00891 shikimate kinase YP_003698383.1 PFAM: amine oxidase; KEGG: vfm:VFMJ11_A1186 flavin monoamine oxidase family protein YP_003698384.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ara:Arad_4048 hypothetical protein YP_003698385.1 PFAM: Methyltransferase type 11; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 12; KEGG: abo:ABO_0828 hypothetical protein YP_003698386.1 PFAM: heat shock protein Hsp20; KEGG: rpf:Rpic12D_4528 heat shock protein HSP20 YP_003698387.1 KEGG: hha:Hhal_0349 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter YP_003698388.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aeh:Mlg_1052 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003698389.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tcx:Tcr_1143 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003698390.1 KEGG: eba:ebA6393 putative glutathione peroxidase protein; PFAM: glutathione peroxidase YP_003698391.1 KEGG: pin:Ping_1426 ABC transporter for copper ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698393.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dma:DMR_20610 GGDEF domain protein; SMART: GGDEF domain containing protein YP_003698394.1 PFAM: ABC-2 type transporter; KEGG: geo:Geob_1784 ABC-2 type transporter YP_003698395.1 PFAM: ABC-2 type transporter; KEGG: dar:Daro_2372 hypothetical protein YP_003698396.1 KEGG: gem:GM21_0012 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698397.1 KEGG: sdn:Sden_3055 response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003698398.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; KEGG: xcv:XCV0114 two-component system sensor protein YP_003698399.1 KEGG: apj:APJL_0059 nitrate/nitrite response regulator protein; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver YP_003698400.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mei:Msip34_0729 histidine kinase; SMART: ATP-binding region ATPase domain protein YP_003698401.1 PFAM: Cell wall-active antibiotics response protein; KEGG: xcb:XC_1549 hypothetical protein YP_003698403.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pen:PSEEN4329 glycerophosphodiester phosphodiesterase YP_003698406.1 PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_3655 alpha/beta hydrolase fold YP_003698407.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: hch:HCH_05422 dihydrofolate reductase YP_003698408.1 KEGG: dds:Ddes_1073 anaerobic ribonucleoside-triphosphate reductase activating protein YP_003698409.1 KEGG: cla:Cla_0048 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase YP_003698410.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: dma:DMR_03500 putative flavodoxin YP_003698411.1 KEGG: smt:Smal_2295 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_003698412.1 TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; KEGG: smt:Smal_2296 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein YP_003698415.1 KEGG: prw:PsycPRwf_1468 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003698417.1 PFAM: HicB family protein; protein of unknown function UPF0150; KEGG: pca:Pcar_0789 hypothetical protein YP_003698419.1 PFAM: beta-lactamase domain protein; KEGG: smd:Smed_2597 beta-lactamase-like protein YP_003698420.1 KEGG: Os11g0689400; hypothetical protein YP_003698421.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: tbd:Tbd_2741 hypothetical protein YP_003698422.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: tbd:Tbd_2741 hypothetical protein YP_003698423.1 KEGG: bph:Bphy_3928 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003698424.1 KEGG: dal:Dalk_0879 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003698425.1 KEGG: afw:Anae109_0489 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003698427.1 KEGG: asu:Asuc_1193 DNA-binding transcriptional repressor PurR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003698428.1 PFAM: protein of unknown function DUF624 YP_003698429.1 PFAM: extracellular solute-binding protein family 1; KEGG: vsp:VS_II1391 ABC transporter: substrate-binding protein precursor YP_003698430.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_06909 ABC-type sugar transport system, permease components YP_003698431.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1101 binding-protein-dependent transport systems inner membrane component YP_003698432.1 KEGG: hypothetical protein YP_003698433.1 PFAM: alpha/beta hydrolase fold; KEGG: rlt:Rleg2_6440 alpha/beta hydrolase fold YP_003698434.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tdn:Suden_1036 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003698435.1 KEGG: gsu:GSU2147 cadmium-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; Contains selenocysteine; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003698436.1 KEGG: dde:Dde_0747 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003698437.1 KEGG: shw:Sputw3181_3443 sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698438.1 KEGG: rso:RS05467 hypothetical protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003698439.1 KEGG: mca:MCA1378 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003698440.1 KEGG: scl:sce1485 putative Beta-xylosidase; PFAM: glycoside hydrolase family 43 YP_003698441.1 PFAM: extracellular solute-binding protein family 1; KEGG: rlg:Rleg_6112 extracellular solute-binding protein family 1 YP_003698442.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_0127 sugar ABC transporter YP_003698443.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xfm:Xfasm12_1605 ABC transporter sugar permease YP_003698444.1 PFAM: protein of unknown function DUF624; KEGG: GPT1; GABA/polyamine transporter YP_003698445.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: rlt:Rleg2_5890 alpha-N-arabinofuranosidase YP_003698446.1 KEGG: eca:ECA3793 putatuve glycosysl hydrolase; PFAM: glycoside hydrolase family 43 YP_003698447.1 KEGG: pmu:PM1244 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_003698448.1 KEGG: scl:sce3311 ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_003698449.1 KEGG: spe:Spro_2243 L-arabinose isomerase; PFAM: L-arabinose isomerase YP_003698450.1 KEGG: vpa:VP1030 LacI family transcription regulator; PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH YP_003698451.1 KEGG: aph:APH_1193 AraM domain-containing protein; PFAM: 3-dehydroquinate synthase YP_003698452.1 KEGG: sfu:Sfum_3401 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003698453.1 SMART: Rhodanese domain protein; KEGG: predicted protein YP_003698454.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gem:GM21_2178 transcriptional regulator, LysR family YP_003698455.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: afw:Anae109_3021 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_003698456.1 KEGG: sbo:SBO_4129 membrane channel protein component of Pn transporter YP_003698457.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bba:Bd3104 phosphonate ABC transporter ATP-binding protein; SMART: AAA ATPase YP_003698458.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: aeh:Mlg_0734 response regulator receiver protein YP_003698459.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dol:Dole_2764 binding-protein-dependent transport systems inner membrane component YP_003698460.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: aeh:Mlg_0732 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase; CBS domain containing protein YP_003698461.1 KEGG: bja:bll3994 hypothetical protein YP_003698462.1 PFAM: flagellar basal body-associated protein FliL YP_003698466.1 KEGG: ppr:PBPRA0971 putative transport ATP-binding protein MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003698467.1 KEGG: vfm:VFMJ11_1029 multidrug resistance ABC transporter ATP-binding and permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003698468.1 PFAM: polysaccharide deacetylase; KEGG: Polysaccharide deacetylase family protein YP_003698469.1 PFAM: Methyltransferase type 11; KEGG: scl:sce3690 hypothetical protein YP_003698470.1 PFAM: aldo/keto reductase; KEGG: Os07g0143000; hypothetical protein YP_003698472.1 KEGG: vpa:VP0503 sodium/alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_003698473.1 KEGG: gme:Gmet_0993 carboxylyase-like protein; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_003698474.1 PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: mca:MCA0052 mrp protein YP_003698476.1 KEGG: ank:AnaeK_2178 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-W factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein YP_003698477.1 KEGG: plu:plu3506 hypothetical protein YP_003698478.1 PFAM: protein of unknown function DUF147; KEGG: pca:Pcar_0999 hypothetical protein YP_003698479.1 PFAM: YbbR family protein; KEGG: fimbriae-associated protein YP_003698480.1 KEGG: pca:Pcar_1001 phosphohexomutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_003698481.1 KEGG: vha:VIBHAR_07005 hypothetical protein; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003698482.1 KEGG: sde:Sde_3524 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698484.1 KEGG: gbm:Gbem_0090 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_003698485.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01961 hypothetical protein YP_003698488.1 PFAM: AbgT putative transporter; short chain fatty acid transporter; KEGG: ppr:PBPRA0142 putative efflux pump component MtrF YP_003698489.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dal:Dalk_5022 protein of unknown function DUF6 transmembrane YP_003698492.1 KEGG: aeh:Mlg_1522 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_003698493.1 KEGG: hypothetical protein YP_003698494.1 KEGG: azo:azo0770 alkyl hydroperoxide reductase subunit F; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein YP_003698495.1 TIGRFAM: peroxiredoxin; KEGG: ara:Arad_8451 anti-oxidant protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein YP_003698496.1 PFAM: OsmC family protein; KEGG: dno:DNO_1109 OsmC-like family protein YP_003698498.1 KEGG: bch:Bcen2424_6241 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_003698499.1 PFAM: regulatory protein TetR; KEGG: apa:APP7_0893 putative transcriptional regulator YP_003698500.1 KEGG: cja:CJA_3753 putative transporter YP_003698501.1 KEGG: Axoneme-associated protein GASP-180 YP_003698502.1 PFAM: GCN5-related N-acetyltransferase; KEGG: asa:ASA_3441 ribosomal-protein-serine acetyltransferase YP_003698503.1 KEGG: hypothetical protein; PFAM: aminoglycoside 3-N-acetyltransferase YP_003698504.1 PFAM: protein of unknown function DUF159; KEGG: ppd:Ppro_0189 hypothetical protein YP_003698505.1 KEGG: pap:PSPA7_4664 hypothetical protein YP_003698508.1 KEGG: bbt:BBta_3011 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003698509.1 KEGG: eba:p2A138 UbiX related subunit of putative (de) carboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_003698510.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: neu:NE2190 integron/retron-type RNA-directed DNA polymerase YP_003698511.1 KEGG: bov:BOV_0218 putative glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase YP_003698512.1 PFAM: Methyltransferase type 11; KEGG: ppu:PP_1524 rRNA (guanine-N(1)-)-methyltransferase YP_003698513.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_pKPN3p05928 N-acetyltransferase-like protein YP_003698514.1 KEGG: hha:Hhal_0549 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003698515.1 PFAM: peptidase M48 Ste24p; KEGG: geo:Geob_1777 peptidase M48 Ste24p YP_003698516.1 PFAM: LemA family protein; KEGG: gbm:Gbem_2479 LemA family protein YP_003698517.1 PFAM: ROK family protein; KEGG: vha:VIBHAR_02870 hypothetical protein YP_003698518.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mlr6435 ABC transporter sugar binding protein YP_003698519.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_0737 binding-protein-dependent transport systems inner membrane component YP_003698520.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sml:Smlt3250 putative sugar transporter, permease protein YP_003698521.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: avi:Avi_5411 beta-galactosidase YP_003698522.1 KEGG: vfm:VFMJ11_A0386 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003698523.1 PFAM: glycoside hydrolase clan GH-D; KEGG: hypothetical protein YP_003698524.1 TIGRFAM: galactokinase; KEGG: sse:Ssed_4020 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein YP_003698525.1 KEGG: dds:Ddes_1950 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase YP_003698526.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: hypothetical protein ; K00964 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_003698529.1 PFAM: SNARE associated Golgi protein; KEGG: hypothetical protein YP_003698530.1 SMART: MCP methyltransferase CheR-type; PAC repeat-containing protein; TIGRFAM: PAS sensor protein; KEGG: dma:DMR_11050 putative chemotaxis CheB/CheR fusion protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; CheB methylesterase YP_003698531.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01961 hypothetical protein YP_003698532.1 KEGG: gem:GM21_3065 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003698533.1 KEGG: net:Neut_0876 flavodoxin/nitric oxide synthase; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH-dependent FMN reductase YP_003698534.1 KEGG: tmz:Tmz1t_1015 hypothetical protein YP_003698535.1 PFAM: HtpX domain protein; peptidase M48 Ste24p; KEGG: bba:Bd1287 heat shock protein HtpX YP_003698536.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: dde:Dde_1684 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; histidine kinase A domain protein; PAS domain containing protein YP_003698537.1 KEGG: dal:Dalk_0661 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase YP_003698538.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: par:Psyc_0746 TRAP-T family transporter periplasmic substrate binding subunit YP_003698539.1 PFAM: Domain of unknown function DUF1850; KEGG: csa:Csal_0387 hypothetical protein YP_003698540.1 KEGG: pcr:Pcryo_0743 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter YP_003698541.1 PFAM: aldo/keto reductase; KEGG: pct:PC1_2358 aldo/keto reductase YP_003698543.1 PFAM: conserved hypothetical protein; KEGG: bpt:Bpet3357 putative secreted protein YP_003698544.1 KEGG: hha:Hhal_1932 beta-lactamase domain-containing protein; PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein YP_003698545.1 KEGG: gsu:GSU2312 sulfate transporter family protein; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease YP_003698546.1 TIGRFAM: ribonuclease Z; KEGG: pmr:PMI0252 ribonuclease Z; PFAM: beta-lactamase domain protein YP_003698547.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tcx:Tcr_1143 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003698548.1 PFAM: protein of unknown function DUF81; KEGG: pat:Patl_2981 hypothetical protein YP_003698549.1 PFAM: aminotransferase class I and II; KEGG: ypg:YpAngola_A2760 aminotransferase, classes I and II YP_003698550.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120664 putative permease component of ABC transporter YP_003698551.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avi:Avi_7346 ABC transporter membrane spanning protein (sugar) YP_003698552.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003698553.1 KEGG: hypothetical protein; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein YP_003698554.1 KEGG: avi:Avi_7634 transcriptional regulator AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver YP_003698555.1 PFAM: glycosyl hydrolase family 88; KEGG: rlg:Rleg_5051 glycosyl hydrolase family 88 YP_003698556.1 PFAM: protein of unknown function DUF624 YP_003698558.1 PFAM: Heparinase II/III family protein; KEGG: sat:SYN_02676 putative cytoplasmic protein YP_003698560.1 KEGG: vvu:VV2_1091 hypothetical protein YP_003698561.1 KEGG: scl:sce5154 KDPG and KHG aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_003698562.1 PFAM: PfkB domain protein; KEGG: pol:Bpro_1737 PfkB YP_003698563.1 KEGG: xcv:XCV0153 short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_003698564.1 KEGG: rlt:Rleg2_5662 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; PFAM: 5-keto 4-deoxyuronate isomerase YP_003698565.1 KEGG: dvl:Dvul_0099 hemolysin III family channel protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_003698566.1 PFAM: Domain of unknown function DUF1836; KEGG: hypothetical protein YP_003698568.1 PFAM: protein of unknown function UPF0126; KEGG: ppd:Ppro_2916 hypothetical protein YP_003698569.1 KEGG: eba:ebA7223 zinc-containing alcohol dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003698570.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ara:Arad_4048 hypothetical protein YP_003698571.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: gbm:Gbem_0457 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003698572.1 PFAM: SNARE associated Golgi protein; KEGG: wsu:WS0198 hypothetical protein YP_003698574.1 KEGG: gur:Gura_0093 hypothetical protein YP_003698575.1 KEGG: cbc:CbuK_0645 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003698576.1 KEGG: vpa:VPA0033 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698580.1 PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: gme:Gmet_3086 transcriptional regulator, putative YP_003698582.1 KEGG: dde:Dde_3188 hypothetical protein; TIGRFAM: futalosine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_003698583.1 PFAM: protein of unknown function DUF191; KEGG: gur:Gura_0686 hypothetical protein YP_003698584.1 PFAM: major facilitator superfamily MFS_1; KEGG: rlt:Rleg2_0160 major facilitator superfamily MFS_1 YP_003698585.1 PFAM: peptidase C60 sortase A and B; KEGG: shn:Shewana3_2409 sortase family protein YP_003698586.1 KEGG: tgr:Tgr7_2678 hypothetical protein YP_003698587.1 KEGG: pmu:PM0995 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase YP_003698588.1 KEGG: gsu:GSU0945 cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003698589.1 KEGG: glo:Glov_2133 methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS; Vitamin B12 dependent methionine synthase activation region YP_003698590.1 KEGG: sun:SUN_1298 putative manganese-dependent inorganic pyrophosphatase; PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein YP_003698591.1 KEGG: amf:AMF_069 thioredoxin (TrxA) YP_003698592.1 KEGG: ent:Ent638_2505 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003698593.1 KEGG: ccv:CCV52592_2239 flagellar hook protein FlgE; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003698594.1 PFAM: regulatory protein TetR; KEGG: dol:Dole_1242 TetR family transcriptional regulator YP_003698595.1 PFAM: acriflavin resistance protein; KEGG: hch:HCH_06591 cation/multidrug efflux pump YP_003698596.1 TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; CBS domain containing protein; MgtE intracellular region; KEGG: pca:Pcar_0596 magnesium transporter; SMART: CBS domain containing protein YP_003698597.1 TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; KEGG: dat:HRM2_28170 MgtE2; SMART: CBS domain containing protein YP_003698598.1 TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rlt:Rleg2_5263 signal transduction histidine kinase; SMART: PAC repeat-containing protein YP_003698599.1 KEGG: glo:Glov_1634 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003698600.1 KEGG: dal:Dalk_2553 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003698601.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bgl:bglu_1g07350 glycosyl transferase YP_003698602.1 PFAM: UspA domain protein; KEGG: dvm:DvMF_1529 UspA domain protein YP_003698603.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: avi:Avi_5067 sulfate permease YP_003698605.1 KEGG: pca:Pcar_2370 cold shock proteins; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003698606.1 KEGG: rso:RSp1286 putative DNA-binding sucrose operon transcriptional repressor transcription regulator protein; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003698607.1 KEGG: asa:ASA_2992 PTS system, sucrose-specific IIBC component; TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_003698608.1 PFAM: Camphor resistance CrcB protein; KEGG: pmy:Pmen_2385 camphor resistance protein CrcB YP_003698609.1 KEGG: ftm:FTM_1582 CrcB family protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_003698610.1 KEGG: rhi:NGR_c26260 putative BCCT family transporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_003698613.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: sme:SMa1548 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003698614.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: ppw:PputW619_3128 flavin reductase domain-containing protein YP_003698615.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: hypothetical protein YP_003698617.1 KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein YP_003698618.1 KEGG: antigen 332 YP_003698619.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: hypothetical protein YP_003698620.1 KEGG: hypothetical protein YP_003698621.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; ATPase associated with various cellular activities AAA_5; KEGG: dat:HRM2_07500 RocR; SMART: AAA ATPase YP_003698622.1 KEGG: geo:Geob_2608 delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003698623.1 KEGG: dat:HRM2_23580 RocD1; TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III YP_003698624.1 PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase YP_003698625.1 KEGG: hypothetical protein; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase YP_003698626.1 KEGG: avi:Avi_8306 ABC transporter nucleotide binding/ATPase protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_003698627.1 PFAM: extracellular solute-binding protein family 1; KEGG: mxa:MXAN_0770 iron ABC transporter, periplasmic iron-binding protein YP_003698628.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_0771 iron ABC transporter, permease protein YP_003698629.1 PFAM: Rhomboid family protein; KEGG: predicted protein YP_003698630.1 KEGG: bpe:BP2079 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_003698631.1 KEGG: ppd:Ppro_2259 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031 YP_003698632.1 TIGRFAM: alanine racemase; KEGG: dds:Ddes_0171 alanine racemase; PFAM: alanine racemase domain protein YP_003698634.1 PFAM: PemK family protein; KEGG: neu:NE1579 PemK-like protein YP_003698635.1 PFAM: Rsbr domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bxe:Bxe_B2486 anti-sigma-factor antagonist domain-containing protein YP_003698636.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pfo:Pfl01_3134 anti-sigma-factor antagonist (STAS) YP_003698637.1 KEGG: aav:Aave_2972 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003698638.1 PFAM: Stage II sporulation E family protein; Phosphoserine phosphatase RsbU; KEGG: geo:Geob_2606 protein serine phosphatase with GAF(s) sensor(s); SMART: protein phosphatase 2C domain protein YP_003698639.1 KEGG: geo:Geob_3040 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS YP_003698640.1 TIGRFAM: anti-sigma B factor; KEGG: sfu:Sfum_2452 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein YP_003698641.1 KEGG: mmw:Mmwyl1_3428 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma-B factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; regulatory protein LuxR YP_003698642.1 KEGG: scl:sce3610 phosphoserine phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_003698643.1 KEGG: gem:GM21_1223 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_003698644.1 KEGG: SPRT-like metalloprotease; PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT YP_003698645.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dde:Dde_3204 cytochrome d ubiquinol oxidase, subunit I YP_003698646.1 KEGG: acp:A2cp1_3872 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003698647.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: pat:Patl_1455 ABC transporter related; SMART: AAA ATPase YP_003698648.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: ses:SARI_02008 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase YP_003698649.1 KEGG: avn:Avin_43850 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase YP_003698650.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: dal:Dalk_0686 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003698651.1 PFAM: protein of unknown function UPF0079; KEGG: gme:Gmet_1881 hypothetical protein YP_003698652.1 PFAM: peptidase M22 glycoprotease; KEGG: sat:SYN_00914 M22 family non-proteolytic peptidase YP_003698653.1 KEGG: ppd:Ppro_2631 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003698654.1 SMART: HNH nuclease; TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: gur:Gura_2310 metalloendopeptidase glycoprotease family; PFAM: peptidase M22 glycoprotease; HNH endonuclease YP_003698655.1 KEGG: pca:Pcar_2038 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698656.1 KEGG: hap:HAPS_0437 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region YP_003698657.1 PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; KEGG: dde:Dde_2702 redox-sensing transcriptional repressor REX YP_003698658.1 KEGG: dze:Dd1591_2675 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003698659.1 PFAM: protein of unknown function DUF534; KEGG: rle:pRL110111 hypothetical protein YP_003698660.1 KEGG: gur:Gura_3573 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003698661.1 KEGG: gme:Gmet_1397 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_003698662.1 KEGG: dat:HRM2_06850 TatA; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003698663.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dma:DMR_37360 molybdopterin oxidoreductase iron-sulfur binding subunit YP_003698664.1 PFAM: Polysulphide reductase NrfD; KEGG: afw:Anae109_3085 polysulphide reductase NrfD YP_003698665.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: dma:DMR_37340 molybdopterin oxidoreductase molybdopterin binding subunit YP_003698666.1 KEGG: sfr:Sfri_3126 cytoplasmic chaperone TorD family protein YP_003698668.1 PFAM: Abortive infection protein; KEGG: smt:Smal_0005 abortive infection protein YP_003698669.1 PFAM: chaperonin Cpn10; KEGG: sat:SYN_00062 co-chaperonin YP_003698670.1 KEGG: pca:Pcar_2770 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003698671.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; KEGG: glo:Glov_2918 integral membrane sensor signal transduction histidine kinase; SMART: GGDEF domain containing protein YP_003698672.1 PFAM: dihydrouridine synthase DuS; KEGG: hypothetical protein YP_003698673.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_0618 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_003698674.1 PFAM: purine catabolism PurC domain protein; KEGG: reu:Reut_B5661 CdaR family transcriptional regulator YP_003698675.1 PFAM: Amidase; KEGG: hypothetical protein LOC100240917 YP_003698676.1 KEGG: scl:sce5876 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; Amidohydrolase 3 YP_003698677.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: avi:Avi_5433 dehydrogenase YP_003698678.1 KEGG: avi:Avi_5433 dehydrogenase; TIGRFAM: xanthine dehydrogenase D subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_003698679.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: glo:Glov_2414 (2Fe-2S)-binding domain protein YP_003698680.1 KEGG: mxa:MXAN_6109 XdhC/CoxI family protein; PFAM: protein of unknown function DUF182 YP_003698681.1 KEGG: geo:Geob_0102 molybdenum hydroxylase accessory protein, YgfJ family YP_003698682.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mxa:MXAN_5705 N-ethylammeline chlorohydrolase YP_003698683.1 KEGG: sme:SM_b20874 hypothetical protein; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_003698684.1 TIGRFAM: urate oxidase; KEGG: hypothetical protein ; K00365 urate oxidase; PFAM: Uricase YP_003698685.1 KEGG: reh:H16_A1009 transthyretin-like protein; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin YP_003698686.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: mes:Meso_2546 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003698687.1 PFAM: aminotransferase class V; KEGG: dda:Dd703_0911 aminotransferase class V YP_003698688.1 PFAM: Ferritin Dps family protein; KEGG: dda:Dd703_1214 ferritin Dps family protein YP_003698689.1 KEGG: azo:azo2810 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003698690.1 SMART: Protein-tyrosine phosphatase, low molecular weight; TIGRFAM: arsenate reductase (thioredoxin); KEGG: hha:Hhal_0091 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight YP_003698691.1 KEGG: sfu:Sfum_0264 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003698692.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: pmr:PMI0809 hypothetical protein YP_003698693.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tdn:Suden_1505 GCN5-related N-acetyltransferase YP_003698694.1 PFAM: DoxX family protein; KEGG: pca:Pcar_1345 hypothetical protein YP_003698695.1 KEGG: pca:Pcar_1345 hypothetical protein YP_003698696.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: NADH oxidase lateral transfer candidate YP_003698697.1 KEGG: ilo:IL2050 hypothetical protein YP_003698698.1 TIGRFAM: cryptochrome, DASH family; KEGG: cry-dash; cryptochrome DASH; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_003698700.1 KEGG: pin:Ping_3063 transposase, IS605 OrfB family protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003698701.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eta:ETA_13710 zinc-containing alcohol dehydrogenase, long-chain YP_003698702.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: dat:HRM2_47640 PdhC YP_003698703.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: rhi:NGR_b19890 acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit YP_003698704.1 KEGG: bph:Bphy_3760 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component YP_003698705.1 KEGG: dat:HRM2_47650 signal-transduction and transcriptional-control protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase YP_003698706.1 KEGG: smt:Smal_0421 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; transcriptional activator domain; transcriptional regulator domain protein; SMART: response regulator receiver YP_003698707.1 KEGG: hypothetical protein; PFAM: response regulator receiver; histidine kinase internal region; glycoside hydrolase family 2 sugar binding; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_003698708.1 KEGG: hypothetical protein similar to erythrocyte membrane-associated giant protein antigen 332; TIGRFAM: LPXTG-motif cell wall anchor domain protein; conserved repeat domain protein; PFAM: Cna B domain protein; Gram-positive anchor; Collagen binding domain protein YP_003698709.1 KEGG: bbt:BBta_0663 hypothetical protein; TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B YP_003698710.1 KEGG: bpy:Bphyt_5584 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; SMART: response regulator receiver YP_003698711.1 KEGG: spe:Spro_1959 sensory histidine kinase DcuS; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003698712.1 PFAM: Asparaginase/glutaminase; KEGG: apa:APP7_0700 probable L-asparaginase YP_003698713.1 PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ccv:CCV52592_1707 citrate transporter YP_003698714.1 KEGG: aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like YP_003698715.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: scl:sce8307 succinate dehydrogenase YP_003698716.1 KEGG: mxa:MXAN_3539 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003698717.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mxa:MXAN_3540 succinate dehydrogenase iron-sulfur subunit YP_003698718.1 KEGG: dal:Dalk_3666 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003698719.1 KEGG: dol:Dole_1251 membrane protein YP_003698720.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pmy:Pmen_0723 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver YP_003698721.1 KEGG: bpl:BURPS1106A_3937 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver YP_003698722.1 KEGG: gur:Gura_1221 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003698723.1 PFAM: regulatory protein TetR; KEGG: abb:ABBFA_002117 bacterial regulatory protein, TetR family protein YP_003698725.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc04442 putative acetyltransferase protein YP_003698726.1 KEGG: eic:NT01EI_3061 uracil-DNA glycosylase, putative; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily YP_003698727.1 KEGG: spe:Spro_1261 endonuclease VIII; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein YP_003698728.1 KEGG: ilo:IL2439 hemolysin III-like protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_003698729.1 PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: ajs:Ajs_2160 methyltransferase type 11 YP_003698731.1 PFAM: protein of unknown function DUF1659 YP_003698732.1 KEGG: dal:Dalk_0324 response regulator receiver modulated serine phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_003698733.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ilo:IL1714 anti-anti-sigma regulatory factor YP_003698734.1 KEGG: gsu:GSU1426 RsbW protein, putative YP_003698735.1 KEGG: glo:Glov_0461 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003698736.1 PFAM: Polysulphide reductase NrfD; KEGG: glo:Glov_3346 polysulphide reductase NrfD YP_003698737.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: hap:HAPS_1090 nitrate reductase YP_003698738.1 PFAM: ApbE family lipoprotein; KEGG: vha:VIBHAR_05540 hypothetical protein YP_003698739.1 PFAM: glycosyl transferase family 2; KEGG: gem:GM21_1665 glycosyl transferase family 2 YP_003698740.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: lch:Lcho_0417 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_003698741.1 KEGG: gur:Gura_1819 shikimate kinase; PFAM: shikimate kinase YP_003698742.1 PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein YP_003698743.1 PFAM: glucose sorbosone dehydrogenase; KEGG: sme:SMa0564 dehydrogenase YP_003698744.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dol:Dole_1139 iron-containing alcohol dehydrogenase YP_003698745.1 PFAM: Domain of unknown function DUF1858 YP_003698746.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dvm:DvMF_1059 putative PAS/PAC sensor protein YP_003698747.1 KEGG: ppd:Ppro_3700 hypothetical protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein YP_003698748.1 KEGG: sde:Sde_0297 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003698749.1 KEGG: Hrc; Hrc protein YP_003698750.1 KEGG: dat:HRM2_35830 putative metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein YP_003698751.1 KEGG: pap:PSPA7_1712 hypothetical protein YP_003698752.1 KEGG: mpt:Mpe_A1714 hypothetical protein YP_003698753.1 KEGG: rpf:Rpic12D_4320 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003698754.1 KEGG: sat:SYN_00981 response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003698755.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: cja:CJA_2447 MorA; SMART: GGDEF domain containing protein; PAS domain containing protein YP_003698756.1 KEGG: ppabcb22; ATP-binding cassette transporter, subfamily B, member 22, group LLP protein PpABCB22; PFAM: ABC transporter related; cyclic nucleotide-binding; ABC transporter transmembrane region; SMART: AAA ATPase; cyclic nucleotide-binding YP_003698757.1 PFAM: cobalamin B12-binding domain protein; KEGG: dal:Dalk_1839 cobalamin B12-binding domain protein YP_003698758.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: scl:sce6798 anti-anti sigma factor protein YP_003698759.1 KEGG: geo:Geob_1031 adenylate/guanylate cyclase with CHASE sensor; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_003698760.1 SMART: Fibronectin type III domain protein; KEGG: hypothetical protein similar to erythrocyte membrane-associated giant protein antigen 332 YP_003698761.1 PFAM: NHL repeat containing protein; KEGG: gbm:Gbem_2063 NHL repeat containing protein YP_003698762.1 KEGG: rpb:RPB_1694 hypothetical protein YP_003698763.1 KEGG: wsu:WS1630 response regulator; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region YP_003698764.1 PFAM: major facilitator superfamily MFS_1; KEGG: cps:CPS_0975 hypothetical protein YP_003698765.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rlg:Rleg_5208 glycerophosphoryl diester phosphodiesterase YP_003698766.1 KEGG: hypothetical protein YP_003698767.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: gsu:GSU2044 sensory box/GGDEF family protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; histidine kinase HAMP region domain protein YP_003698768.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: afr:AFE_1388 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SMART: AAA ATPase YP_003698769.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ppr:PBPRA1157 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase YP_003698770.1 KEGG: ypi:YpsIP31758_1310 pyridine nucleotide-disulphide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SirA family protein; SMART: Rhodanese domain protein YP_003698772.1 PFAM: nitroreductase; KEGG: mfa:Mfla_1136 nitroreductase YP_003698774.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rle:RL0523 putative purine deaminase YP_003698775.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; Cache type 2 domain protein; histidine kinase HAMP region domain protein; KEGG: vfm:VFMJ11_1040 sensory box/GGDEF family protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein YP_003698776.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: gur:Gura_0187 ATPase YP_003698777.1 PFAM: protein of unknown function DUF58; KEGG: psa:PST_1154 hypothetical protein YP_003698778.1 KEGG: scl:sce8271 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein YP_003698779.1 KEGG: glo:Glov_1901 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_003698780.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: aci:ACIAD1243 putative transporter YP_003698781.1 PFAM: FeoA family protein YP_003698782.1 KEGG: ppd:Ppro_3681 ferrous iron transport protein B; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein YP_003698783.1 KEGG: hha:Hhal_1920 hypothetical protein YP_003698784.1 PFAM: conserved hypothetical protein; KEGG: ank:AnaeK_1447 hypothetical protein YP_003698786.1 KEGG: Os12g0230100; hypothetical protein ; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003698787.1 PFAM: protein of unknown function DUF1499; KEGG: dal:Dalk_4690 protein of unknown function DUF1499 YP_003698789.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: hch:HCH_04603 phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_003698790.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: cvi:CV_0162 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003698791.1 KEGG: gur:Gura_2064 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like YP_003698792.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: hhe:HH1619 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003698793.1 KEGG: nis:NIS_0873 phosphoribosylformylglycinamidine synthase, small subunit; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS YP_003698794.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: mes:Meso_1279 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003698795.1 KEGG: ade:Adeh_4214 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003698796.1 KEGG: glo:Glov_2702 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_003698797.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: mlo:mll7962 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003698798.1 KEGG: gbm:Gbem_2403 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_003698799.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: apj:APJL_0971 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_003698800.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: vfm:VFMJ11_2513 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; protein of unknown function DUF201; ATP-grasp domain protein YP_003698801.1 KEGG: gem:GM21_3021 CBS domain containing membrane protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_003698803.1 KEGG: rle:RL3447 hypothetical protein YP_003698805.1 KEGG: cjj:CJJ81176_0021 hypothetical protein YP_003698806.1 KEGG: bja:bll8231 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_003698807.1 PFAM: D-alanine--D-alanine ligase domain protein; protein of unknown function DUF201; RimK domain protein ATP-grasp; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; KEGG: bja:bll8229 hypothetical protein YP_003698808.1 PFAM: N-formylglutamate amidohydrolase; KEGG: sml:Smlt3109 hypothetical protein YP_003698809.1 PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2698 histidine kinase internal region; SMART: ATP-binding region ATPase domain protein YP_003698810.1 KEGG: gme:Gmet_2697 LytR/AlgR family transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_003698811.1 PFAM: carbon starvation protein CstA; KEGG: asa:ASA_1691 carbon starvation protein CstA YP_003698813.1 PFAM: conserved hypothetical protein; KEGG: rle:RL1055 hypothetical protein YP_003698814.1 KEGG: gme:Gmet_2201 adenine deaminase; PFAM: amidohydrolase YP_003698815.1 KEGG: sde:Sde_3023 endoglucanase-like YP_003698816.1 KEGG: lpp:lpp1203 hypothetical protein; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor YP_003698817.1 KEGG: gem:GM21_0738 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003698818.1 PFAM: inner-membrane translocator; KEGG: pap:PSPA7_1276 ABC transporter permease YP_003698819.1 PFAM: protein of unknown function DUF534; KEGG: bov:BOV_1974 putative ABC transporter, periplasmic substrate-binding protein YP_003698820.1 KEGG: aeh:Mlg_0829 1-Cys peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; Redoxin domain protein YP_003698822.1 PFAM: BCCT transporter; KEGG: cps:CPS_3860 BCCT family transporter YP_003698823.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: scl:sce8246 CobW/P47K family protein YP_003698825.1 PFAM: ribosomal protein S14; KEGG: maq:Maqu_0732 ribosomal protein S14 YP_003698826.1 KEGG: hypothetical protein YP_003698827.1 PFAM: cytochrome P450; KEGG: nmu:Nmul_A2167 cytochrome P450 YP_003698829.1 KEGG: abu:Abu_0181 DNA/RNA helicase; PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003698830.1 PFAM: NUDIX hydrolase; KEGG: geo:Geob_2829 NUDIX hydrolase YP_003698831.1 PFAM: protein of unknown function DUF1648 YP_003698832.1 KEGG: dat:HRM2_43630 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003698833.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: cvi:CV_1033 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003698834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; KEGG: dde:Dde_3417 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: GGDEF domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region; PAS domain containing protein YP_003698835.1 TIGRFAM: geranylgeranylglyceryl phosphate synthase family protein; PFAM: PcrB family protein YP_003698836.1 KEGG: geo:Geob_0379 UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase YP_003698837.1 SMART: NAD-dependent DNA ligase ; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1; TIGRFAM: DNA ligase, NAD-dependent; KEGG: yen:YE1211 NAD-dependent DNA ligase LigA; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold YP_003698838.1 PFAM: CamS sex pheromone cAM373 family protein YP_003698839.1 KEGG: gsu:GSU3383 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_003698840.1 KEGG: pca:Pcar_2168 glutamyl-tRNA (Gln) amidotransferase, C subunit, GatC-like; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_003698841.1 KEGG: geo:Geob_0382 glutamyl-tRNA(Gln) amidotransferase, B subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; GatB central domain protein YP_003698843.1 KEGG: vpa:VPA0693 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_003698844.1 PFAM: protein of unknown function DUF948 YP_003698846.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: deoxyribose-phosphate aldolase ; K01619 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_003698847.1 KEGG: mxa:MXAN_1432 L-allo-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II YP_003698848.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: eba:ebA4999 arsenate resistance operon, repressor ArsD YP_003698849.1 TIGRFAM: arsenite-activated ATPase ArsA; KEGG: bvi:Bcep1808_4680 arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase YP_003698850.1 KEGG: spc:Sputcn32_1215 arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter YP_003698851.1 PFAM: FAD dependent oxidoreductase; KEGG: bmj:BMULJ_05680 hypothetical protein YP_003698852.1 TIGRFAM: RNA methyltransferase, TrmA family; KEGG: tau:Tola_2631 RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase YP_003698855.1 KEGG: dat:HRM2_20630 putative type II restriction enzyme (methylase subunit) YP_003698856.1 SMART: DEAD-like helicase; KEGG: fph:Fphi_1827 DEAD/DEAH box helicase-like protein YP_003698857.1 PFAM: Putative helicase A859L; KEGG: dat:HRM2_20610 hypothetical protein YP_003698858.1 KEGG: sde:Sde_1829 methionine sulfoxide reductase A YP_003698859.1 KEGG: hypothetical protein YP_003698861.1 PFAM: Sigma-70 region 4 type 2; KEGG: hypothetical protein YP_003698864.1 KEGG: ecr:ECIAI1_2661 conserved hypothetical protein from bacteriophage origin YP_003698865.1 KEGG: hde:HDEF_1660 APSE-2 prophage; hypothetical YP_003698866.1 SMART: DNA-directed DNA polymerase; KEGG: xfa:XF2525 phage-related DNA polymerase YP_003698867.1 PFAM: phage antirepressor protein; BRO domain protein; KEGG: ecs:ECs1557 putative antirepressor protein YP_003698868.1 PFAM: virulence-associated E family protein; KEGG: dno:DNO_0266 virulence-associated protein VapE2 YP_003698869.1 PFAM: VRR-NUC domain protein; KEGG: ecr:ECIAI1_2667 conserved hypothetical protein from bacteriophage origin YP_003698870.1 KEGG: xfm:Xfasm12_0427 hypothetical protein; PFAM: SNF2-related protein; SMART: DEAD-like helicase YP_003698873.1 KEGG: scl:sce1879 ECF family RNA polymerase sigma factor YP_003698876.1 KEGG: mms:mma_2757 DNA modification methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003698877.1 KEGG: vsp:VS_1442 hypothetical protein; putative membrane protein YP_003698878.1 KEGG: nis:NIS_0745 hypothetical protein YP_003698882.1 KEGG: bph:Bphy_7138 P27 family phage terminase small subunit; TIGRFAM: phage terminase, small subunit, , P27 family; PFAM: terminase small subunit putative P27 YP_003698883.1 PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase YP_003698885.1 KEGG: hch:HCH_04555 HK97 family phage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_003698886.1 PFAM: peptidase S14 ClpP; KEGG: dac:Daci_1633 peptidase S14 ClpP YP_003698887.1 KEGG: cjr:CJE1458 HK97 family major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97 YP_003698889.1 KEGG: mes:Meso_1889 uncharacterized phage protein YP_003698890.1 KEGG: asu:Asuc_1242 phage head-tail adaptor, putative; TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein YP_003698891.1 KEGG: asu:Asuc_1243 HK97 family phage protein; TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein YP_003698893.1 TIGRFAM: phage major tail protein, phi13 family YP_003698896.1 KEGG: pmr:PMI1973 phage tail fiber protein (tape measure protein); TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_003698897.1 TIGRFAM: phage tail component YP_003698898.1 TIGRFAM: phage minor structural protein YP_003698900.1 KEGG: dvl:Dvul_1067 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis YP_003698901.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Sporulation domain protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003698902.1 PFAM: Resolvase domain; Recombinase; KEGG: hch:HCH_06395 site-specific recombinase YP_003698903.1 PFAM: Resolvase domain; Recombinase; KEGG: oan:Oant_1563 resolvase domain-containing protein YP_003698904.1 PFAM: Resolvase domain; Recombinase; KEGG: bra:BRADO6418 putative recombinase YP_003698905.1 PFAM: S-layer domain protein; Fibronectin type III domain protein; KEGG: hypothetical protein YP_003698906.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2834 putative ABC transporter periplasmic binding protein YP_003698908.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; S-layer domain protein; KEGG: mmw:Mmwyl1_4082 5'-nucleotidase domain-containing protein YP_003698909.1 KEGG: hiq:CGSHiGG_06285 recombination regulator RecX; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase YP_003698910.1 KEGG: dvm:DvMF_0360 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003698912.1 KEGG: pin:Ping_3063 transposase, IS605 OrfB family protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003698913.1 PFAM: S-layer domain protein; YLP motif domain protein; KEGG: hypothetical protein YP_003698916.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003698917.1 KEGG: hypothetical protein YP_003698918.1 PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003698919.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3633 transposase IS3/IS911 family protein YP_003698921.1 PFAM: S-layer domain protein; Ig domain protein; KEGG: hypothetical protein YP_003698924.1 PFAM: Fibronectin type III domain protein; KEGG: dal:Dalk_0547 fibronectin type III domain protein YP_003698926.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003698929.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3633 transposase IS3/IS911 family protein YP_003698930.1 PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003698933.1 PFAM: IS66 Orf2 family protein; KEGG: sbn:Sbal195_0639 IS66 Orf2 family protein YP_003698935.1 PFAM: polysaccharide lyase 8 alpha-helical; polysaccharide lyase family 8; polysaccharide lyase family 8 domain protein; S-layer domain protein; Ig domain protein group 2 domain protein; KEGG: vfm:VFMJ11_A1113 hyaluronate lyase; SMART: Ig domain protein group 2 domain protein YP_003698936.1 PFAM: S-layer domain protein; KEGG: ppd:Ppro_1307 allergen V5/TPX-1 family protein YP_003698938.1 KEGG: dar:Daro_1729 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003698939.1 PFAM: extracellular solute-binding protein family 1; KEGG: vsp:VS_II1391 ABC transporter: substrate-binding protein precursor YP_003698940.1 KEGG: abu:Abu_2143 hypothetical protein YP_003698942.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; S-layer domain protein; Hyalin; KEGG: gsu:GSU2075 subtilisin YP_003698943.1 PFAM: NLP/P60 protein; KEGG: mei:Msip34_0442 NLP/P60 protein YP_003698945.1 PFAM: Uncharacterised protein family UPF0324; KEGG: pub:SAR11_0841 putative integral membrane protein YP_003698946.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tbd:Tbd_1717 transcriptional regulator YP_003698947.1 KEGG: bja:blr0583 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_003698948.1 PFAM: Capsule synthesis protein, CapA; KEGG: cja:CJA_1179 putative capsule biosynthesis protein CapA YP_003698949.1 KEGG: fph:Fphi_1487 capsule biosynthesis protein CapC YP_003698950.1 KEGG: ilo:IL2400 NAD-dependent epimerase/dehydratase YP_003698951.1 KEGG: pin:Ping_3063 transposase, IS605 OrfB family protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003698955.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: histidyl-tRNA synthetase, mitochondrial precursor; K01892 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003698956.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003698959.1 KEGG: hpa:HPAG1_0201 putative transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003698961.1 KEGG: pst:PSPTO_0127 alginate biosynthesis regulatory protein AlgR; PFAM: response regulator receiver; SMART: response regulator receiver YP_003698962.1 KEGG: hypothetical protein; PFAM: response regulator receiver; histidine kinase internal region; glycoside hydrolase family 2 sugar binding; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_003698963.1 KEGG: Muc3; mucin 3, intestinal; TIGRFAM: conserved repeat domain protein; LPXTG-motif cell wall anchor domain protein; PFAM: Cna B domain protein; protein of unknown function DUF11 YP_003698965.1 KEGG: psb:Psyr_3534 histidine kinase, HAMP region:cache: chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003698966.1 PFAM: transposase IS3/IS911 family protein; KEGG: ecl:EcolC_3407 transposase IS3/IS911 family protein YP_003698967.1 KEGG: sde:Sde_3900 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003698969.1 KEGG: geo:Geob_2297 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; Cache domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003698970.1 KEGG: xca:xccb100_1857 methyl-accepting chemotaxis protein, probable; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003698972.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B YP_003698973.1 KEGG: shm:Shewmr7_0055 response regulator receiver protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003698974.1 PFAM: copper amine oxidase domain protein; SCP-like extracellular; KEGG: noc:Noc_1373 hypothetical protein YP_003698980.1 PFAM: glycosyl transferase family 2; KEGG: abn:AB57_2930 glycosyltransferase YP_003698982.1 KEGG: cvi:CV_3020 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_003698983.1 KEGG: psa:PST_0474 hypothetical protein YP_003698984.1 KEGG: TPR Domain containing protein YP_003698985.1 KEGG: prw:PsycPRwf_0549 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003698986.1 KEGG: efe:EFER_1529 putative TRAP dicarboxylate transporter, DctM subunit precursor, putative transmembrane protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter YP_003698987.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sfu:Sfum_3144 tripartite ATP-independent periplasmic transporter DctQ YP_003698988.1 KEGG: pna:Pnap_4043 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria YP_003698989.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: eta:ETA_26160 N-carbamoyl-L-amino acid hydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003698990.1 KEGG: mpt:Mpe_B0536 CdaR family transcriptional regulator; PFAM: GAF domain protein; SMART: GAF domain protein YP_003698991.1 KEGG: spe:Spro_4372 transcriptional antiterminator, BglG YP_003698992.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: aha:AHA_0173 ascorbate-specific phosphotransferase enzyme IIA component YP_003698993.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: kpu:KP1_0051 putative sugar phosphotransferase component IIB YP_003698994.1 PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: spq:SPAB_00632 ascorbate-specific PTS system enzyme IIC YP_003698995.1 KEGG: aha:AHA_0035 Cof family hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase YP_003698996.1 KEGG: vha:VIBHAR_06141 hypothetical protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003698997.1 KEGG: cvi:CV_3020 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_003698998.1 PFAM: RbsD or FucU transport; KEGG: cvi:CV_3019 D-ribose pyranase YP_003698999.1 KEGG: lhk:LHK_01712 RbsA; PFAM: ABC transporter related; SMART: AAA ATPase YP_003699000.1 PFAM: inner-membrane translocator; KEGG: cvi:CV_3017 D-ribose transport system permease protein YP_003699001.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: lhk:LHK_01714 RbsB YP_003699002.1 KEGG: ank:AnaeK_0366 hypothetical protein YP_003699003.1 KEGG: ank:AnaeK_0365 hypothetical protein YP_003699004.1 PFAM: transcriptional regulator PadR family protein; KEGG: glo:Glov_0133 transcriptional regulator, PadR-like family YP_003699005.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: ftn:FTN_0451 signal transduction protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein YP_003699006.1 KEGG: hypothetical protein YP_003699008.1 KEGG: pmr:PMI3711 transposase YP_003699009.1 KEGG: ecq:ECED1_3588 conserved hypothetical protein, YhgA-like YP_003699010.1 KEGG: trichohyalin YP_003699011.1 KEGG: psa:PST_1911 hypothetical protein YP_003699012.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sat:SYN_02446 glycerol-3-phosphate dehydrogenase YP_003699013.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sat:SYN_02447 pyridine nucleotide-disulphide oxidoreductase family protein YP_003699014.1 PFAM: protein of unknown function DUF1667; KEGG: sat:SYN_02448 zinc finger protein YP_003699015.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: saz:Sama_0646 response regulator receiver protein YP_003699016.1 PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; KEGG: fta:FTA_0364 deoxyribodipyrimidine photolyase-related protein YP_003699017.1 KEGG: smt:Smal_3818 DNA-binding transcriptional regulator AgaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003699018.1 KEGG: dat:HRM2_08650 PfkB1; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_003699019.1 KEGG: vpa:VPA1424 PTS system, fructose-specific IIABC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_003699020.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: pna:Pnap_0600 dimethylmenaquinone methyltransferase YP_003699022.1 PFAM: lipolytic protein G-D-S-L family; KEGG: saz:Sama_2630 lipolytic enzyme, G-D-S-L YP_003699023.1 KEGG: acp:A2cp1_0670 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003699024.1 KEGG: dia:Dtpsy_1056 ABC-2 type transporter YP_003699025.1 TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: scl:sce2491 Glycerone kinase DAK1 domain-containing protein; PFAM: Dak kinase YP_003699026.1 KEGG: asu:Asuc_1440 dihydroxyacetone kinase ADP-binding subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase YP_003699027.1 KEGG: bra:BRADO4613 putative dihydroxyacetone kinase phosphotransfer protein (DhaH/M-like); TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component YP_003699028.1 KEGG: abb:ABBFA_001712 bacterial regulatory protein, TetR family protein; TIGRFAM: dihydroxyacetone kinase regulator; PFAM: regulatory protein TetR YP_003699029.1 TIGRFAM: dihydroxyacetone kinase DhaK1b subunit; KEGG: bra:BRADO4609 PTS-dependent dihydroxyacetone kinase, dihydroxyacetone binding subunit DhaK; PFAM: Dak kinase YP_003699030.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003699031.1 PFAM: SCP-like extracellular; KEGG: scl:sce1577 putative beta-galactosidase YP_003699033.1 PFAM: Ig family protein; Ig domain protein; KEGG: mxa:MXAN_7200 endonuclease/exonuclease/phosphatase family protein YP_003699035.1 KEGG: dal:Dalk_3426 regulator of chromosome condensation RCC1; PFAM: Ig domain protein group 2 domain protein; glycoside hydrolase family 13 domain protein; regulator of chromosome condensation RCC1; SMART: Ig domain protein group 2 domain protein YP_003699036.1 KEGG: hypothetical protein YP_003699038.1 KEGG: lpp:lpp2914 hypothetical protein; PFAM: von Willebrand factor type A; Ig domain protein group 2 domain protein; SMART: von Willebrand factor type A; Ig domain protein group 2 domain protein YP_003699039.1 KEGG: dat:HRM2_20140 VanZ-like family protein YP_003699040.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; S-layer domain protein; protein of unknown function DUF1034; KEGG: scl:sce3689 subtilisin like protease YP_003699041.1 KEGG: hch:HCH_04792 beta-glucanase/beta-glucan synthetase; PFAM: glycoside hydrolase family 16; S-layer domain protein YP_003699042.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bra:BRADO3494 levodione reductase YP_003699043.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpf:Rpic12D_3945 short-chain dehydrogenase/reductase SDR YP_003699044.1 KEGG: scl:sce2990 hypothetical protein; PFAM: SNF2-related protein; SNF2 helicase associated domain protein ; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003699045.1 KEGG: eba:ebA7099 hypothetical protein YP_003699046.1 KEGG: sfu:Sfum_2289 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; PAS domain containing protein YP_003699047.1 KEGG: saz:Sama_2391 isoaspartyl dipeptidase; TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase YP_003699048.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: scl:sce3461 oligopeptide ABC transporter ATP-binding protein; SMART: AAA ATPase YP_003699049.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; SMART: AAA ATPase YP_003699050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_0628 binding-protein-dependent transport systems inner membrane component YP_003699051.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_3104 binding-protein-dependent transport systems inner membrane component YP_003699052.1 PFAM: extracellular solute-binding protein family 5; KEGG: dze:Dd1591_3971 extracellular solute-binding protein family 5 YP_003699053.1 PFAM: Protein of unknown function DUF1980; KEGG: dal:Dalk_1553 membrane protein-like protein YP_003699054.1 PFAM: permease; KEGG: dal:Dalk_1552 permease YP_003699055.1 KEGG: pna:Pnap_2858 insertion element protein YP_003699057.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003699058.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: gsu:GSU0580 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_003699059.1 PFAM: protein of unknown function DUF299; KEGG: gsu:GSU0450 hypothetical protein YP_003699060.1 KEGG: sme:SMc04290 hypothetical protein; PFAM: Acetamidase/Formamidase YP_003699061.1 PFAM: S-layer domain protein; KEGG: geo:Geob_0423 ErfK/YbiS/YcfS/YnhG family protein YP_003699062.1 PFAM: L-lactate permease; KEGG: shw:Sputw3181_2834 L-lactate permease YP_003699064.1 KEGG: dde:Dde_3293 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003699065.1 PFAM: Bile acid:sodium symporter; KEGG: asu:Asuc_1159 bile acid:sodium symporter YP_003699066.1 KEGG: pca:Pcar_1840 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_003699067.1 PFAM: Acetyl xylan esterase; KEGG: hypothetical protein YP_003699068.1 PFAM: DinB family protein YP_003699069.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rlg:Rleg_5712 xylose isomerase domain protein TIM barrel YP_003699070.1 KEGG: mca:MCA0478 allophanate hydrolase, subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_003699071.1 PFAM: LamB/YcsF family protein; KEGG: vei:Veis_0374 LamB/YcsF family protein YP_003699072.1 KEGG: dat:HRM2_46550 putative allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2 YP_003699073.1 KEGG: swp:swp_1150 VanZ like protein YP_003699074.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: afw:Anae109_4370 threonyl/alanyl tRNA synthetase SAD YP_003699075.1 PFAM: regulatory protein TetR YP_003699076.1 PFAM: protein of unknown function DUF520; KEGG: gsu:GSU3204 putative nucleotide-binding protein YP_003699077.1 KEGG: GH14882 gene product from transcript GH14882-RA; PFAM: peptidase M14 carboxypeptidase A; protein of unknown function DUF1058; SMART: peptidase M14 carboxypeptidase A YP_003699078.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; S-layer domain protein; nucleic acid binding OB-fold tRNA/helicase-type; Endonuclease/exonuclease/phosphatase; KEGG: scl:sce0688 endonuclease/exonuclease/phosphatase family protein YP_003699079.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003699080.1 TIGRFAM: pullulanase, extracellular; PFAM: alpha amylase catalytic region; pullanase-associated protein; S-layer domain protein; glycoside hydrolase family 13 domain protein; KEGG: fph:Fphi_0329 pullulonase, type I; SMART: alpha amylase catalytic sub domain YP_003699082.1 KEGG: similar to KIAA0674 protein YP_003699083.1 PFAM: protein of unknown function DUF81; KEGG: sfu:Sfum_2931 hypothetical protein YP_003699084.1 KEGG: gem:GM21_1803 heat shock protein HSP90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003699085.1 KEGG: dol:Dole_1414 hypothetical protein YP_003699086.1 KEGG: sat:SYN_03707 hypothetical protein YP_003699088.1 PFAM: peptidase M42 family protein; KEGG: pap:PSPA7_1666 hypothetical protein YP_003699089.1 PFAM: DoxX family protein; KEGG: bvi:Bcep1808_5405 hypothetical protein YP_003699091.1 KEGG: rpf:Rpic12D_2167 phosphoenolpyruvate carboxylase; PFAM: phosphoenolpyruvate carboxylase YP_003699092.1 KEGG: hha:Hhal_0554 sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003699093.1 PFAM: basic membrane lipoprotein; KEGG: cvi:CV_2467 membrane lipoprotein YP_003699094.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ecc:c2762 sensory histidine kinase AtoS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003699095.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: dde:Dde_0461 Na+/H+ antiporter NhaC YP_003699096.1 PFAM: HesB/YadR/YfhF-family protein YP_003699097.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003699098.1 KEGG: tcx:Tcr_1043 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase YP_003699099.1 PFAM: flagellin domain protein; KEGG: neu:NE1593 flagellin YP_003699100.1 PFAM: O-antigen polymerase; KEGG: sde:Sde_0152 hypothetical protein YP_003699101.1 KEGG: xcb:XC_4140 hypothetical protein YP_003699102.1 KEGG: hypothetical protein; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_003699103.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: mxa:MXAN_2845 hypothetical protein YP_003699104.1 PFAM: Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: hypothetical protein; SMART: ATP-binding region ATPase domain protein YP_003699105.1 KEGG: xop:PXO_04459 two-component system regulatory protein; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR YP_003699106.1 KEGG: dvl:Dvul_1226 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003699107.1 KEGG: cvi:CV_1124 primosome assembly protein PriA; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase YP_003699109.1 KEGG: dps:DP0280 competence protein F YP_003699111.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: gur:Gura_3121 hypothetical protein YP_003699112.1 PFAM: FlgN family protein YP_003699113.1 KEGG: dde:Dde_3152 flagellar hook-associated protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003699114.1 KEGG: hha:Hhal_0510 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_003699116.1 PFAM: protein of unknown function DUF180; KEGG: sat:SYN_02809 transmembrane protein YP_003699117.1 KEGG: nam:NAMH_0494 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator YP_003699118.1 KEGG: prw:PsycPRwf_0663 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003699119.1 PFAM: flagellin domain protein; KEGG: pha:PSHAa0781 flagellin YP_003699120.1 PFAM: Integrase catalytic region; KEGG: dat:HRM2_44510 tranposase YP_003699124.1 PFAM: major facilitator superfamily MFS_1; KEGG: dps:DP2323 transmembrane transport protein YP_003699126.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: cvi:CV_1454 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer YP_003699127.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: hiq:CGSHiGG_05275 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003699128.1 KEGG: gsu:GSU0605 thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_003699129.1 KEGG: hypothetical protein; PFAM: hydroxyethylthiazole kinase YP_003699130.1 KEGG: dps:DP0960 cold-shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003699132.1 KEGG: hypothetical protein; TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC-2 type transporter YP_003699133.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: aeh:Mlg_1560 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein YP_003699134.1 KEGG: hypothetical protein YP_003699135.1 KEGG: avn:Avin_32910 ribonuclease BN protein; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_003699136.1 PFAM: alpha/beta hydrolase fold; KEGG: scl:sce0898 hydrolase YP_003699138.1 KEGG: pin:Ping_3063 transposase, IS605 OrfB family protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003699140.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; Male sterility domain; KEGG: ilo:IL2492 nucleoside-diphosphate-sugar epimerase YP_003699141.1 KEGG: lch:Lcho_1617 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_003699142.1 KEGG: vpa:VPA0562 putative chemotaxis transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003699143.1 KEGG: tgr:Tgr7_0698 putative metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003699144.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpb:RPB_1695 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003699145.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: csa:Csal_0506 flagellar hook-associated 2-like protein YP_003699146.1 PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: gsu:GSU3037 flagellar hook-associated protein 2 YP_003699148.1 PFAM: flagellar protein FlaG protein; KEGG: nam:NAMH_0486 polar flagellin YP_003699149.1 KEGG: pca:Pcar_1111 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_003699150.1 PFAM: S-layer domain protein; KEGG: prw:PsycPRwf_1162 hypothetical protein YP_003699151.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; S-layer domain protein; KEGG: sfu:Sfum_0741 5'-nucleotidase domain-containing protein YP_003699153.1 KEGG: vfi:VF_2049 maltodextrin glucosidase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain YP_003699155.1 KEGG: gur:Gura_4397 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003699156.1 KEGG: glo:Glov_3186 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003699157.1 KEGG: pca:Pcar_1937 ribosome-associated protein Y (PSrp-1); TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_003699158.1 KEGG: stm:STM2758 putative phosphotransferase system IIC component; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_003699159.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: pct:PC1_0742 transcriptional antiterminator, BglG YP_003699160.1 KEGG: sfu:Sfum_1202 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; helicase domain protein YP_003699162.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: sat:SYN_01478 hypothetical protein YP_003699163.1 PFAM: cytochrome c class I; KEGG: smt:Smal_1045 cytochrome c class I YP_003699164.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: mxa:MXAN_5748 putative cell division ABC transporter, ATP-binding protein FtsE; SMART: AAA ATPase YP_003699165.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1933 hypothetical protein YP_003699166.1 PFAM: Peptidase M23; KEGG: pen:PSEEN0379 M23/M37 family metalloendopeptidase YP_003699167.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: aeh:Mlg_2568 C-terminal processing peptidase-3; PFAM: peptidase S41; Peptidoglycan-binding domain 1 protein; PDZ/DHR/GLGF domain protein YP_003699168.1 KEGG: hypothetical protein YP_003699169.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; KEGG: dps:DP2765 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_003699170.1 KEGG: pca:Pcar_0087 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_003699171.1 KEGG: similar to Uncharacterized protein MGC35361 YP_003699172.1 PFAM: PspC domain protein; KEGG: cbc:CbuK_0644 stress-responsive transcriptional regulator YP_003699173.1 PFAM: membrane protein of unknown function; KEGG: dia:Dtpsy_3382 membrane protein of unknown function YP_003699174.1 KEGG: glo:Glov_2164 HPr kinase/phosphorylase; TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein YP_003699175.1 KEGG: dal:Dalk_1768 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_003699176.1 PFAM: nucleoside recognition domain protein; KEGG: mmw:Mmwyl1_3717 nucleoside recognition domain-containing protein YP_003699177.1 KEGG: ank:AnaeK_2060 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003699178.1 KEGG: rso:RS02346 putative acyl transferase protein YP_003699179.1 TIGRFAM: histidyl-tRNA synthetase 2; KEGG: glo:Glov_3252 ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II (G H P and S) YP_003699180.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: gur:Gura_4058 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region YP_003699181.1 TIGRFAM: histidinol dehydrogenase; KEGG: sfu:Sfum_3299 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003699182.1 KEGG: gme:Gmet_0386 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_003699183.1 KEGG: pca:Pcar_2686 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; SNO glutamine amidotransferase YP_003699184.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: cff:CFF8240_1351 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_003699185.1 KEGG: geo:Geob_0693 imidazoleglycerol phosphate synthase, cyclase subunit; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003699186.1 KEGG: ppr:PBPRA1085 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase YP_003699187.1 KEGG: mxa:MXAN_0895 phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_003699188.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: cti:RALTA_A0015 putative isoprenylcysteine carboxyl methyltransferase transmembrane protein YP_003699189.1 KEGG: pca:Pcar_0114 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003699190.1 PFAM: conserved hypothetical protein; KEGG: gsu:GSU1884 hypothetical protein YP_003699191.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: afw:Anae109_2613 protein of unknown function UPF0052 and CofD YP_003699192.1 PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: hypothetical protein LOC100010560 YP_003699193.1 KEGG: gur:Gura_2966 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003699194.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: pnu:Pnuc_0934 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003699195.1 KEGG: bba:Bd0843 RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_003699196.1 PFAM: putative sugar-binding domain protein; KEGG: smd:Smed_3131 DeoR family transcriptional regulator YP_003699197.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: geo:Geob_2897 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase YP_003699198.1 KEGG: pca:Pcar_1332 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003699199.1 KEGG: gem:GM21_1882 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase YP_003699200.1 KEGG: ppd:Ppro_3611 phosphoglyceromutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein YP_003699201.1 TIGRFAM: enolase; KEGG: geo:Geob_3099 phosphopyruvate hydratase; PFAM: enolase YP_003699202.1 PFAM: LysR substrate-binding; regulatory protein LysR; regulatory protein MarR; KEGG: dal:Dalk_0925 transcriptional regulator, LysR family YP_003699203.1 KEGG: scl:sce9160 spermidine/putrescine transport system ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_003699204.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cja:CJA_1590 ABC transporter permease protein YP_003699205.1 PFAM: beta-lactamase domain protein; KEGG: mfa:Mfla_1382 beta-lactamase-like protein YP_003699206.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ent:Ent638_2159 oxidoreductase domain-containing protein YP_003699207.1 KEGG: afw:Anae109_2279 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_003699208.1 PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA4646 putative carboxylesterase YP_003699209.1 KEGG: rpa:RPA4646 putative carboxylesterase YP_003699210.1 SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: gsu:GSU1485 ribonuclease R, putative; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_003699211.1 KEGG: gsu:GSU1709 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_003699214.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pca:Pcar_2287 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein YP_003699215.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: mca:MCA2082 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003699216.1 KEGG: gme:Gmet_1228 putative anti-sigma regulatory factor (serine/threonine protein kinase) YP_003699217.1 KEGG: vsa:VSAL_II0329 putative response regulator; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein YP_003699218.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: noc:Noc_2976 anti-sigma factor antagonist YP_003699219.1 KEGG: sse:Ssed_2589 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003699220.1 KEGG: noc:Noc_2401 phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003699221.1 KEGG: mfa:Mfla_2304 YVTN beta-propeller repeat-containing protein YP_003699222.1 KEGG: gsu:GSU2837 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_003699223.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_5136 3-hydroxyacyl-CoA dehydrogenase YP_003699224.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: gem:GM21_2090 acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003699225.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gur:Gura_1593 acyl-CoA dehydrogenase domain-containing protein YP_003699227.1 KEGG: afw:Anae109_2523 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_003699228.1 PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_3953 major facilitator transporter YP_003699229.1 KEGG: spe:Spro_1397 ABC transporter-related protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_003699230.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1396 binding-protein-dependent transport systems inner membrane component YP_003699231.1 PFAM: NLPA lipoprotein; KEGG: spe:Spro_1395 NlpA lipoprotein YP_003699233.1 KEGG: hypothetical protein YP_003699234.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pat:Patl_1682 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003699235.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: ilo:IL0153 cysteine desulfurase activator ATPase; SMART: AAA ATPase YP_003699236.1 KEGG: ABC(membrane) family transporter (Fe-S assembly/SufBCD system); TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_003699237.1 KEGG: mxa:MXAN_1156 cysteine desulfurase SufS; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003699238.1 KEGG: tmz:Tmz1t_1895 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein YP_003699239.1 KEGG: similar to ABC transporter subunit; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_003699240.1 PFAM: protein of unknown function DUF72; KEGG: bcj:BCAM1883 hypothetical protein YP_003699241.1 PFAM: protein of unknown function DUF81; KEGG: acp:A2cp1_3594 protein of unknown function DUF81 YP_003699242.1 PFAM: metallophosphoesterase; KEGG: seh:SeHA_C4439 5'-nucleotidase domain protein YP_003699243.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: asa:ASA_1479 metal-dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003699244.1 TIGRFAM: thymidylate synthase; KEGG: ngk:NGK_1590 thymidylate synthase; PFAM: thymidylate synthase YP_003699245.1 KEGG: asu:Asuc_0714 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_003699246.1 PFAM: Na+/H+ antiporter NhaC-like; Citrate transporter; KEGG: vvy:VV1347 hypothetical protein YP_003699248.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: pca:Pcar_2334 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_003699249.1 PFAM: protein of unknown function DUF86 YP_003699250.1 PFAM: regulatory protein ArsR; KEGG: aha:AHA_3605 hypothetical protein YP_003699251.1 KEGG: bph:Bphy_7446 HAD family hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003699252.1 KEGG: hypothetical protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_003699253.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: pca:Pcar_2331 NifU-like protein YP_003699255.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mms:mma_2605 NADH dehydrogenase YP_003699256.1 PFAM: protein of unknown function DUF1450; KEGG: gur:Gura_2909 hypothetical protein YP_003699258.1 PFAM: Radical SAM domain protein; KEGG: glo:Glov_0625 radical SAM domain protein YP_003699259.1 KEGG: afr:AFE_1509 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003699260.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: rty:RT0500 NADP-thioredoxin reductase YP_003699263.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: hypothetical protein ; K09775 hypothetical protein YP_003699264.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: csa:Csal_3138 tripartite ATP-independent periplasmic transporter DctQ YP_003699265.1 KEGG: aeh:Mlg_1943 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_003699266.1 KEGG: aeh:Mlg_1941 TRAP dicarboxylate transporter-DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria YP_003699267.1 PFAM: BioY protein; KEGG: sfu:Sfum_1749 BioY protein YP_003699270.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: pna:Pnap_2313 electron transfer flavoprotein beta-subunit YP_003699271.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: glo:Glov_0571 electron transfer flavoprotein alpha subunit YP_003699272.1 TIGRFAM: geranylgeranyl reductase; KEGG: lch:Lcho_1370 electron-transferring-flavoprotein dehydrogenase; PFAM: FAD dependent oxidoreductase; HI0933 family protein YP_003699273.1 KEGG: bxe:Bxe_B1433 putative ferredoxin like protein; FixX YP_003699274.1 KEGG: atc:AGR_L_1389 proline dehydrogenase transcriptional activator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_003699275.1 PFAM: aminotransferase class I and II; KEGG: pla:Plav_2300 aspartate aminotransferase YP_003699276.1 PFAM: RNA binding S1 domain protein; KEGG: EMB2726 (EMBRYO DEFECTIVE 2726); translation elongation factor YP_003699277.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gbm:Gbem_0781 iron-containing alcohol dehydrogenase YP_003699278.1 KEGG: afw:Anae109_2086 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_003699279.1 KEGG: psa:PST_2084 hypothetical protein YP_003699280.1 KEGG: yen:YE0588 putative cation-transporting P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_003699284.1 PFAM: sodium:neurotransmitter symporter; KEGG: glo:Glov_2640 sodium:neurotransmitter symporter YP_003699286.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cps:CPS_0980 glycosy hydrolase family protein YP_003699287.1 KEGG: pca:Pcar_0429 uncharacterized NAD(FAD)-dependent dehydrogenase YP_003699288.1 PFAM: protein of unknown function DUF156; KEGG: aci:ACIAD2398 hypothetical protein YP_003699289.1 KEGG: Nanp; N-acetylneuraminic acid phosphatase; K01097 N-acylneuraminate-9-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003699290.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: sat:SYN_01478 hypothetical protein YP_003699291.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: pca:Pcar_1719 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase YP_003699293.1 KEGG: hypothetical protein YP_003699294.1 KEGG: gme:Gmet_0529 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003699295.1 PFAM: UspA domain protein; KEGG: pol:Bpro_1197 hypothetical protein YP_003699296.1 KEGG: pca:Pcar_1840 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_003699297.1 KEGG: gsu:GSU0777 formate dehydrogenase, major subunit, selenocysteine-containing; TIGRFAM: formate dehydrogenase, alpha subunit; Contains selenocysteine; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_003699298.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bav:BAV3144 nformate dehydrogenase, iron-sulfur subunit YP_003699299.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bxe:Bxe_B2551 formate dehydrogenase gamma subunit YP_003699300.1 PFAM: formate dehydrogenase accessory protein; KEGG: sat:SYN_00288 uncharacterized protein involved in formate dehydrogenase formation YP_003699301.1 KEGG: ppd:Ppro_3519 formate dehydrogenase accessory protein FdhD YP_003699302.1 KEGG: dat:HRM2_02690 MoeA1; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain YP_003699303.1 KEGG: sfu:Sfum_0615 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV YP_003699304.1 KEGG: dol:Dole_0045 twin arginine-targeting protein translocase; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003699305.1 KEGG: glo:Glov_2686 NUDIX hydrolase; TIGRFAM: nucleoside triphosphatase YtkD; PFAM: NUDIX hydrolase YP_003699306.1 KEGG: dma:DMR_22300 putative S9 family peptidase YP_003699307.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: geo:Geob_1656 methionine adenosyltransferase; PFAM: S-adenosylmethionine synthetase YP_003699308.1 KEGG: bph:Bphy_1435 hexapaptide repeat-containing transferase YP_003699309.1 PFAM: alpha/beta hydrolase fold; KEGG: dol:Dole_2799 alpha/beta hydrolase fold YP_003699310.1 PFAM: Protein of unknown function DUF2600; KEGG: sat:SYN_01806 putative cytoplasmic protein YP_003699311.1 PFAM: putative rRNA methylase; KEGG: nme:NMB0747 hypothetical protein YP_003699312.1 TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; KEGG: gme:Gmet_3163 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_003699313.1 KEGG: hypothetical protein ; K01869 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_003699314.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dps:DP3117 hypothetical protein YP_003699316.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: maq:Maqu_0535 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003699317.1 PFAM: protein of unknown function UPF0047; KEGG: dat:HRM2_22690 hypothetical protein YP_003699318.1 KEGG: gme:Gmet_0411 cell cycle protein; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_003699319.1 KEGG: sfu:Sfum_2588 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_003699320.1 KEGG: abo:ABO_2537 pseudouridylate synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003699321.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003699322.1 PFAM: major facilitator superfamily MFS_1; proton/sugar symporter LacY; nucleoside:H symporter; KEGG: sde:Sde_2090 transporter, putative YP_003699323.1 KEGG: gur:Gura_3859 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003699324.1 KEGG: glo:Glov_0159 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX YP_003699327.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: gur:Gura_1705 glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003699328.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: gsu:GSU1023 glycogen synthase; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1 YP_003699329.1 KEGG: vsp:VS_II1279 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit YP_003699330.1 KEGG: vha:VIBHAR_05944 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase YP_003699331.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: fph:Fphi_0328 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain YP_003699332.1 TIGRFAM: pullulanase, type I; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: fph:Fphi_0329 pullulonase, type I; SMART: alpha amylase catalytic sub domain YP_003699333.1 PFAM: aminoglycoside phosphotransferase; KEGG: abc:ACICU_01982 aminoglycoside phosphotransferase YP_003699334.1 TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; KEGG: bba:Bd0370 hypothetical protein; PFAM: putative methyltransferase YP_003699335.1 PFAM: beta-lactamase domain protein; KEGG: bba:Bd2896 putative metal-dependent hydrolase YP_003699337.1 KEGG: sfu:Sfum_3414 peptidase M42 family protein; PFAM: peptidase M42 family protein YP_003699338.1 TIGRFAM: YtoQ family protein; KEGG: hypothetical protein YP_003699340.1 PFAM: phosphotransferase system EIIC; KEGG: msu:MS1478 PfoR protein YP_003699341.1 PFAM: protein of unknown function DUF1444; KEGG: vei:Veis_0261 hypothetical protein YP_003699343.1 KEGG: ccv:CCV52592_0623 nicotinate phosphoribosyltransferase YP_003699345.1 KEGG: rak:A1C_01800 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003699346.1 PFAM: peptidase M29 aminopeptidase II; KEGG: glo:Glov_1842 peptidase M29 aminopeptidase II YP_003699347.1 PFAM: protein of unknown function DUF948; KEGG: gme:Gmet_2781 hypothetical protein YP_003699348.1 KEGG: hypothetical protein YP_003699350.1 KEGG: net:Neut_0241 cell division protein FtsA YP_003699351.1 KEGG: glo:Glov_2802 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; chorismate mutase; PFAM: DAHP synthetase I/KDSA; Chorismate mutase YP_003699352.1 TIGRFAM: catabolite control protein A; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_06458 transcriptional regulator; SMART: regulatory protein LacI YP_003699353.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3589 chemotaxis protein MotA YP_003699354.1 PFAM: OmpA/MotB domain protein; KEGG: maq:Maqu_0050 OmpA/MotB domain-containing protein YP_003699356.1 KEGG: dde:Dde_0765 CBS; PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein YP_003699357.1 KEGG: gur:Gura_2297 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily YP_003699358.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: dat:HRM2_45890 membrane carboxypeptidase (penicillin-binding protein) YP_003699360.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: cvi:CV_3072 tyrosine-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_003699361.1 PFAM: DGC domain protein; KEGG: pag:PLES_10981 hypothetical protein YP_003699363.1 KEGG: swd:Swoo_4865 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003699364.1 PFAM: regulatory protein TetR; KEGG: sfu:Sfum_3090 TetR family transcriptional regulator YP_003699368.1 PFAM: protein of unknown function UPF0118; KEGG: gme:Gmet_2050 hypothetical protein YP_003699369.1 KEGG: asa:ASA_2277 hypothetical protein YP_003699370.1 TIGRFAM: nitrate reductase, alpha subunit; KEGG: dat:HRM2_00660 NarG; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_003699371.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: kpe:KPK_2475 nitrate reductase 2, beta subunit YP_003699372.1 KEGG: tbd:Tbd_1405 respiratory nitrate reductase chaperone NarJ; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit YP_003699373.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: dat:HRM2_00630 NarI; PFAM: Nitrate reductase gamma subunit YP_003699374.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0660 nitrite transporter YP_003699375.1 PFAM: major facilitator superfamily MFS_1; KEGG: maq:Maqu_3139 major facilitator superfamily transporter YP_003699376.1 KEGG: hypothetical protein YP_003699377.1 KEGG: bxe:Bxe_C0734 nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_003699378.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afw:Anae109_0428 binding-protein-dependent transport systems inner membrane component YP_003699379.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: mxa:MXAN_0035 aliphatic sulfonate ABC transporter substrate-binding protein YP_003699380.1 KEGG: avn:Avin_22000 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003699381.1 KEGG: sat:SYN_02616 cytochrome c552; PFAM: cytochrome c552 YP_003699382.1 KEGG: dvm:DvMF_1491 cytochrome c nitrite reductase small subunit YP_003699383.1 KEGG: dvm:DvMF_2385 nitrite reductase (cytochrome; ammonia-forming); PFAM: cytochrome c552 YP_003699386.1 KEGG: lip:LI0957 hypothetical protein YP_003699387.1 PFAM: cytochrome c assembly protein; KEGG: scl:sce8173 cytochrome c-type biogenesis protein YP_003699388.1 KEGG: asa:ASA_1372 cytochrome c-type biogenesis protein YP_003699389.1 KEGG: maq:Maqu_1952 TPR repeat-containing protein YP_003699391.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: spl:Spea_0487 ABC transporter related; SMART: AAA ATPase YP_003699392.1 PFAM: cytochrome c-type biogenesis protein CcmB; ABC-2 type transporter; KEGG: mxa:MXAN_3257 heme exporter protein CcmB YP_003699393.1 PFAM: cytochrome c assembly protein; KEGG: dvm:DvMF_3129 cytochrome c assembly protein YP_003699395.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gsu:GSU1321 thioredoxin family protein YP_003699396.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; KEGG: hac:Hac_0003 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_003699397.1 KEGG: dal:Dalk_4863 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase YP_003699398.1 KEGG: cps:CPS_3722 hypothetical protein YP_003699399.1 KEGG: noc:Noc_2887 hypothetical protein YP_003699400.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: nis:NIS_0248 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003699401.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: ank:AnaeK_2797 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003699402.1 KEGG: aha:AHA_2293 GAF domain-containing protein YP_003699403.1 KEGG: sun:SUN_0354 PHP family histidinol phosphatase/hydrolase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein YP_003699404.1 PFAM: Septation ring formation regulator EzrA; KEGG: viral A-type inclusion protein YP_003699405.1 KEGG: similar to Phactr2 protein YP_003699406.1 PFAM: Amidohydrolase 3; KEGG: scl:sce3068 putative secreted protein YP_003699407.1 PFAM: ATP-NAD/AcoX kinase; KEGG: abu:Abu_1986 NAD(+) kinase YP_003699408.1 KEGG: dvm:DvMF_1703 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; peptidase S14 ClpP YP_003699409.1 PFAM: RDD domain containing protein; KEGG: pca:Pcar_2416 hypothetical protein YP_003699410.1 PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dde:Dde_2313 thiol peroxidase (atypical 2-Cys peroxiredoxin) YP_003699411.1 PFAM: N-6 DNA methylase; KEGG: bpt:Bpet3991 type I restriction modification enzyme M subunit YP_003699412.1 KEGG: tau:Tola_1703 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_003699414.1 PFAM: UspA domain protein; KEGG: dma:DMR_37330 putative universal stress protein YP_003699415.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lpf:lpl0603 hypothetical protein YP_003699416.1 PFAM: peptidase M24; creatinase; KEGG: geo:Geob_3058 peptidase M24 YP_003699417.1 PFAM: beta-lactamase domain protein; KEGG: mes:Meso_1362 metal-dependent hydrolase YP_003699419.1 KEGG: scl:sce0443 chloride channel; PFAM: DRTGG domain protein; CBS domain containing protein; thioesterase superfamily protein; regulatory protein GntR HTH; SMART: CBS domain containing protein YP_003699421.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: sfu:Sfum_1231 phosphoesterase domain-containing protein YP_003699422.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: sfu:Sfum_1225 DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein YP_003699423.1 KEGG: dds:Ddes_1534 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); PFAM: malic protein NAD-binding; malic protein domain protein YP_003699424.1 KEGG: vap:Vapar_5148 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003699425.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: pca:Pcar_0737 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_003699426.1 KEGG: gur:Gura_2506 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_003699427.1 TIGRFAM: 6-phosphofructokinase; KEGG: aha:AHA_2383 6-phosphofructokinase; PFAM: phosphofructokinase YP_003699428.1 KEGG: dps:DP3116 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta YP_003699429.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: dvl:Dvul_1845 FxsA cytoplasmic membrane protein YP_003699430.1 PFAM: protein of unknown function DUF441; KEGG: hdu:HD1071 hypothetical protein YP_003699431.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: bba:Bd0562 hypothetical protein; PFAM: Citrate synthase YP_003699432.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: afw:Anae109_2186 isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003699433.1 TIGRFAM: malate dehydrogenase, NAD-dependent; KEGG: dal:Dalk_0818 malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_003699434.1 PFAM: MaoC domain protein dehydratase; KEGG: dat:HRM2_42120 MaoC YP_003699435.1 KEGG: sat:SYN_00981 response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003699436.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gme:Gmet_2694 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_003699437.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: pca:Pcar_0592 DNA polymerase I; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2 YP_003699438.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: nme:NMB1295 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; zinc finger Fpg domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_003699439.1 KEGG: hypothetical protein; K00859 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_003699440.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gsu:GSU1629 glyceraldehyde 3-phosphate dehydrogenase 1; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_003699442.1 PFAM: ATP-cone domain protein; KEGG: dal:Dalk_3311 ATP-cone domain protein YP_003699443.1 PFAM: replication initiation and membrane attachment family protein YP_003699444.1 KEGG: maq:Maqu_0998 IstB ATP binding domain-containing protein; PFAM: Primosomal DnaI domain protein; IstB domain protein ATP-binding protein; Chromosomal replication initiator DnaA; SMART: AAA ATPase YP_003699445.1 KEGG: dma:DMR_21460 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003699446.1 KEGG: tgr:Tgr7_1450 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD YP_003699447.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: aeh:Mlg_1560 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003699448.1 KEGG: gsu:GSU1516 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_003699449.1 KEGG: dps:DP1426 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_003699450.1 KEGG: psp:PSPPH_2138 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_003699451.1 PFAM: protein of unknown function DUF1294; KEGG: ret:RHE_CH01861 putative inner membrane protein YP_003699452.1 PFAM: SNARE associated Golgi protein; KEGG: lpc:LPC_2706 hypothetical protein YP_003699454.1 PFAM: dUTPase; KEGG: cco:CCC13826_2153 dUTPase YP_003699455.1 KEGG: eck:EC55989_4376 putative endo-1,4-beta-glucanase; PFAM: peptidase M42 family protein YP_003699457.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_2886 substrate-binding region of ABC-type glycine betaine transport system YP_003699458.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rlg:Rleg_0053 tRNA/rRNA methyltransferase (SpoU) YP_003699459.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; KEGG: geo:Geob_3361 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003699460.1 KEGG: sat:SYN_01723 phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_003699462.1 KEGG: ribonuclease H ; K10743 ribonuclease H2 subunit A; TIGRFAM: ribonuclease HIII; PFAM: ribonuclease HII/HIII YP_003699463.1 PFAM: protein of unknown function DUF710; KEGG: noc:Noc_2576 hypothetical protein YP_003699464.1 PFAM: Colicin V production protein; KEGG: gur:Gura_4049 colicin V production protein YP_003699465.1 KEGG: geo:Geob_1150 PHP domain protein; PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein YP_003699466.1 TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; KEGG: pca:Pcar_2680 mismatch repair ATPase; SMART: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; MutS III domain protein YP_003699467.1 PFAM: protein of unknown function DUF350; KEGG: reh:H16_A0040 hypothetical protein YP_003699469.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sfu:Sfum_0108 AMP-dependent synthetase and ligase YP_003699470.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sfu:Sfum_0108 AMP-dependent synthetase and ligase YP_003699471.1 PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: sfu:Sfum_1401 TetR family transcriptional regulator YP_003699472.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xca:xccb100_2726 enoyl-CoA hydratase/isomerase family protein YP_003699473.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit YP_003699474.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: sat:SYN_02637 electron transfer flavoprotein alpha-subunit YP_003699475.1 KEGG: prw:PsycPRwf_2309 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain YP_003699476.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: sat:SYN_01348 nuclease subunit of the excinuclease complex; SMART: Excinuclease ABC C subunit domain protein YP_003699477.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: ppw:PputW619_3762 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003699478.1 PFAM: Protein of unknown function DUF2507 YP_003699479.1 KEGG: eba:ebA5555 cation transporter; PFAM: cation transporter YP_003699480.1 KEGG: scl:sce8307 succinate dehydrogenase; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; PFAM: Fumarate reductase respiratory complex YP_003699481.1 TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: mxa:MXAN_3539 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003699482.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mxa:MXAN_3540 succinate dehydrogenase iron-sulfur subunit YP_003699483.1 PFAM: thioesterase superfamily protein; KEGG: pcr:Pcryo_0101 thioesterase superfamily protein YP_003699484.1 PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: dze:Dd1591_0746 transcriptional antiterminator, BglG YP_003699485.1 KEGG: asa:ASA_3060 phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003699486.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: aha:AHA_3040 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003699487.1 KEGG: ppd:Ppro_1076 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003699488.1 TIGRFAM: glutamate racemase; KEGG: gsu:GSU2923 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003699489.1 TIGRFAM: ribonuclease PH; KEGG: azo:azo3963 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003699490.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; KEGG: dde:Dde_0504 Ham1-like protein; PFAM: Ham1 family protein YP_003699491.1 KEGG: gbm:Gbem_3113 phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_003699493.1 KEGG: hypothetical protein; TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein; peptidylprolyl isomerase FKBP-type YP_003699494.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: sfu:Sfum_0099 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase YP_003699495.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: afw:Anae109_3418 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5 YP_003699496.1 KEGG: sfu:Sfum_4052 GTP-binding protein, HSR1-related; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003699497.1 TIGRFAM: glutamyl-tRNA reductase; KEGG: dol:Dole_3238 glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_003699498.1 PFAM: cytochrome c assembly protein; KEGG: sat:SYN_03385 heme insertion protein YP_003699499.1 TIGRFAM: porphobilinogen deaminase; KEGG: glo:Glov_0502 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_003699500.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: lip:LI0117 siroheme synthase YP_003699501.1 KEGG: ppd:Ppro_0442 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_003699502.1 KEGG: hha:Hhal_2011 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_003699503.1 PFAM: Acetyl xylan esterase; KEGG: hch:HCH_00659 alpha/beta fold family hydrolase YP_003699504.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: glo:Glov_0509 regulatory protein, FmdB family YP_003699507.1 KEGG: hypothetical protein YP_003699508.1 PFAM: Cell wall-active antibiotics response protein YP_003699509.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: dma:DMR_14190 two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein YP_003699510.1 KEGG: sml:Smlt1255 putative two-component response regulator transcriptional regulatory protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003699511.1 PFAM: RimK domain protein ATP-grasp; KEGG: apa:APP7_0562 ribosomal protein S6 modification protein YP_003699512.1 KEGG: hap:HAPS_0258 ribosomal protein S6 modification protein, glutamic acid ligase; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201 YP_003699513.1 TIGRFAM: FolC bifunctional protein; KEGG: mxa:MXAN_2705 tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003699514.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: lpf:lpl0283 hypothetical protein; SMART: GGDEF domain containing protein; GAF domain protein YP_003699515.1 KEGG: predicted gene, 100039272 YP_003699516.1 KEGG: YALI0C11165p YP_003699517.1 KEGG: mxa:MXAN_2513 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase YP_003699518.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: vvy:VV2874 twitching motility protein PilT; SMART: AAA ATPase YP_003699519.1 PFAM: Type II secretion system F domain; KEGG: sfu:Sfum_0118 type II secretion system protein YP_003699520.1 KEGG: dol:Dole_1410 hypothetical protein YP_003699521.1 KEGG: dol:Dole_1410 hypothetical protein YP_003699522.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: glo:Glov_2160 peptidase A24A domain protein YP_003699523.1 KEGG: gsu:GSU2032 type IV pilus biogenesis protein PilM YP_003699524.1 PFAM: Fimbrial assembly family protein YP_003699527.1 KEGG: aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like YP_003699528.1 KEGG: geo:Geob_1563 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_003699529.1 KEGG: gur:Gura_4138 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_003699530.1 KEGG: afw:Anae109_0117 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA YP_003699531.1 KEGG: glo:Glov_2494 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_003699532.1 TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_003699533.1 PFAM: Septum formation inhibitor MinC; KEGG: sfu:Sfum_1280 septum site-determining protein MinC YP_003699534.1 KEGG: sfu:Sfum_1281 septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase YP_003699535.1 PFAM: extracellular solute-binding protein family 1; KEGG: mxa:MXAN_7295 putative sugar ABC transporter, periplasmic sugar-binding protein YP_003699536.1 KEGG: ppr:PBPRB1561 putative ribose operon repressor, RbsR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003699537.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_9630 trehalosemaltose ABC transporter YP_003699538.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7293 putative sugar ABC transporter, permease protein YP_003699539.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: pag:PLES_48561 cytoplasmic axial filament protein; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_003699540.1 KEGG: scl:sce7922 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_003699541.1 PFAM: protein of unknown function DUF464 YP_003699542.1 KEGG: gsu:GSU3235 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_003699543.1 PFAM: beta-lactamase domain protein; KEGG: dal:Dalk_3435 beta-lactamase domain protein YP_003699544.1 TIGRFAM: phosphate binding protein; KEGG: acp:A2cp1_4148 phosphate binding protein YP_003699545.1 KEGG: sfu:Sfum_0704 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_003699546.1 KEGG: dma:DMR_38860 putative phosphate transport system permease protein PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_003699547.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: dvm:DvMF_0881 phosphate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_003699548.1 KEGG: hypothetical protein; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_003699549.1 PFAM: protein of unknown function DUF1516 YP_003699550.1 KEGG: tmz:Tmz1t_0474 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003699551.1 KEGG: afr:AFE_0045 sulfur/pyrite/thiosulfate/sulfide-induced protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003699552.1 KEGG: nam:NAMH_0356 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003699553.1 KEGG: afw:Anae109_2857 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003699554.1 KEGG: dde:Dde_0682 hypothetical protein; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_003699555.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: glo:Glov_0934 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003699556.1 PFAM: Polysulphide reductase NrfD; KEGG: wsu:WS0707 molybdopterin oxidoreductase, membrane subunit YP_003699557.1 KEGG: aeh:Mlg_0632 cytoplasmic chaperone TorD family protein YP_003699558.1 KEGG: abu:Abu_0075 rhodanese-like sulfur transferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003699559.1 TIGRFAM: alanine dehydrogenase; KEGG: mxa:MXAN_4146 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003699562.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: gme:Gmet_0987 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein YP_003699563.1 KEGG: glo:Glov_0588 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003699564.1 KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003699566.1 KEGG: gsu:GSU0013 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003699567.1 PFAM: acriflavin resistance protein; KEGG: tgr:Tgr7_1732 acriflavin resistance protein YP_003699568.1 KEGG: hypothetical protein YP_003699569.1 PFAM: regulatory protein TetR; KEGG: gur:Gura_0986 TetR family transcriptional regulator YP_003699570.1 KEGG: gbm:Gbem_1802 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_003699571.1 KEGG: ent:Ent638_1219 pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I YP_003699572.1 PFAM: protein of unknown function DUF123; KEGG: tgr:Tgr7_0278 protein of unknown function DUF123 YP_003699574.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: avi:Avi_4174 4A-hydroxytetrahydrobiopterin dehydratase YP_003699575.1 KEGG: abu:Abu_0830 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_003699576.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: apa:APP7_1501 putative NAD(P)H oxidoreductase YP_003699577.1 KEGG: gbm:Gbem_3387 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003699579.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: pca:Pcar_2387 hypothetical protein; PFAM: Radical SAM domain protein YP_003699580.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rso:RSc1377 hypothetical protein YP_003699581.1 KEGG: sfu:Sfum_3721 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_003699582.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: oan:Oant_2429 TRAP transporter solute receptor TAXI family protein YP_003699583.1 KEGG: mxa:MXAN_2789 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003699584.1 KEGG: ppu:PP_0317 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003699585.1 PFAM: extracellular solute-binding protein family 1; KEGG: asa:ASA_2382 ABC-type maltose/maltodextrin transporter, periplasmic binding protein YP_003699586.1 PFAM: binding-protein-dependent transport systems inner membrane component; TM2 domain containing protein; KEGG: esa:ESA_03420 hypothetical protein YP_003699587.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_2380 ABC-type maltose/maltodextrin transporter, permease protein YP_003699588.1 KEGG: pay:PAU_04248 hth-type transcriptional repressor cytr; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003699589.1 PFAM: protein of unknown function UPF0118; KEGG: vfm:VFMJ11_2055 transporter YP_003699590.1 KEGG: bch:Bcen2424_5472 beta-lactamase domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003699592.1 KEGG: sse:Ssed_1986 intracellular proteinase inhibitor domain-containing protein YP_003699593.1 KEGG: wri:WRi_010380 helicase, SNF2 family; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003699595.1 PFAM: Scaffold protein Nfu/NifU; KEGG: NifU-like protein YP_003699596.1 PFAM: AzlC family protein; KEGG: dps:DP2465 branched chain amino acid ABC transporter permease YP_003699597.1 PFAM: branched-chain amino acid transport; KEGG: tau:Tola_2152 branched-chain amino acid transport YP_003699598.1 PFAM: GCN5-related N-acetyltransferase; KEGG: similar to N-acetyltransferase 8B YP_003699599.1 KEGG: ent:Ent638_0005 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003699600.1 KEGG: vap:Vapar_0701 hypothetical protein; TIGRFAM: cytochrome c oxidase assembly factor CtaG; PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related YP_003699601.1 PFAM: electron transport protein SCO1/SenC; KEGG: mxa:MXAN_7388 SCO1/SenC family protein YP_003699602.1 KEGG: hch:HCH_05869 molybdopterin converting factor, small subunit; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_003699603.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mxa:MXAN_2564 molybdopterin converting factor, subunits 1/2 YP_003699604.1 KEGG: dal:Dalk_3996 molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region YP_003699605.1 KEGG: gur:Gura_3541 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain YP_003699606.1 KEGG: dal:Dalk_2705 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003699607.1 PFAM: HesB/YadR/YfhF-family protein YP_003699608.1 KEGG: scl:sce3757 CRP family global nitrogen regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003699609.1 KEGG: apj:APJL_1142 hypothetical protein YP_003699611.1 KEGG: noc:Noc_2686 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family YP_003699612.1 PFAM: basic membrane lipoprotein; KEGG: dde:Dde_1507 Bmp family membrane protein YP_003699614.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: gur:Gura_1875 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_003699615.1 KEGG: pca:Pcar_1440 3-oxoacyl-(acyl-carrier-protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_003699616.1 PFAM: Radical SAM domain protein; KEGG: dvu:DVU0855 radical SAM domain-containing protein YP_003699617.1 KEGG: hypothetical protein; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_003699618.1 KEGG: ppd:Ppro_2444 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_003699619.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: spq:SPAB_04332 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003699620.1 PFAM: sodium/calcium exchanger membrane region; KEGG: afw:Anae109_3831 cation antiporter (Na+/Ca2+) YP_003699621.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003699622.1 KEGG: afr:AFE_2171 GTP-binding protein YP_003699623.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tdn:Suden_0790 hypothetical protein YP_003699624.1 PFAM: arsenate reductase and related; glutaredoxin; KEGG: spl:Spea_1992 arsenate reductase and related YP_003699625.1 PFAM: Negative regulator of genetic competence YP_003699627.1 KEGG: probabale oligoendopeptidase F ; K08602 oligoendopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F YP_003699628.1 KEGG: gbm:Gbem_2523 DsbA oxidoreductase YP_003699629.1 PFAM: globin; KEGG: tbd:Tbd_0774 putative oxygen-binding protein (globin) YP_003699630.1 PFAM: Lytic transglycosylase catalytic; KEGG: abm:ABSDF0829 putative transglycosylase YP_003699631.1 PFAM: adenylate cyclase YP_003699632.1 PFAM: RelA/SpoT domain protein; KEGG: pfs:PFLU1597 hypothetical protein YP_003699633.1 PFAM: ATP-NAD/AcoX kinase; KEGG: hypothetical protein ; K00858 NAD+ kinase YP_003699634.1 PFAM: pseudouridine synthase; KEGG: aeh:Mlg_2552 ribosomal large subunit pseudouridine synthase D YP_003699635.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: avi:Avi_1021 enoyl-(acyl-carrier-protein) reductase YP_003699637.1 PFAM: NADPH-dependent FMN reductase; KEGG: eta:ETA_14480 putative oxidoreductase YieF YP_003699639.1 KEGG: dvl:Dvul_2128 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003699640.1 KEGG: gme:Gmet_0821 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003699641.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: ppw:PputW619_4512 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein YP_003699642.1 PFAM: Methionine sulfoxide reductase A; Contains selenocysteine; KEGG: Peptide methionine sulfoxide reductase family protein; K07304 peptide-methionine (S)-S-oxide reductase YP_003699643.1 KEGG: hypothetical protein YP_003699644.1 KEGG: glo:Glov_3015 glutamate synthase, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003699645.1 KEGG: geo:Geob_2593 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003699646.1 KEGG: bcs:BCAN_A1689 malate synthase G; PFAM: Malate synthase family protein YP_003699647.1 KEGG: acp:A2cp1_3198 malate synthase A; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_003699648.1 KEGG: cvi:CV_4302 high-affinity choline transport protein; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_003699649.1 KEGG: bja:blr2557 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003699650.1 KEGG: conserved hypothetical protein YP_003699653.1 KEGG: prostaglandin f2-alpha synthase; PFAM: aldo/keto reductase YP_003699655.1 PFAM: protein of unknown function DUF59; KEGG: cbg:CbuG_0657 hypothetical cytosolic protein YP_003699656.1 KEGG: rms:RMA_1053 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003699657.1 PFAM: phosphatidylglycerophosphatase A YP_003699658.1 PFAM: Phosphoesterase HXTX; KEGG: hypothetical protein YP_003699659.1 PFAM: GCN5-related N-acetyltransferase; KEGG: abo:ABO_1271 acetyltransferase YP_003699660.1 KEGG: csa:Csal_2049 S-ribosylhomocysteinase; PFAM: LuxS protein YP_003699661.1 PFAM: nitroreductase; KEGG: dze:Dd1591_2389 nitroreductase YP_003699663.1 KEGG: geo:Geob_0734 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003699664.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: ilo:IL0200 K+ uptake system component YP_003699665.1 PFAM: UspA domain protein; KEGG: aha:AHA_3418 universal stress protein YP_003699666.1 PFAM: MscS Mechanosensitive ion channel; KEGG: nam:NAMH_1702 mechanosensitive ion channel YP_003699667.1 PFAM: glutaredoxin; KEGG: geo:Geob_3180 glutaredoxin YP_003699668.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: har:HEAR0446 hypothetical protein YP_003699669.1 KEGG: hypothetical protein; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase hexapeptide repeat containing protein YP_003699670.1 TIGRFAM: amidohydrolase; KEGG: sfu:Sfum_1222 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003699671.1 PFAM: MscS Mechanosensitive ion channel; KEGG: tbd:Tbd_0499 mechanosensitive ion channel YP_003699672.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: asa:ASA_0269 potassium uptake protein KtrA YP_003699673.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: gme:Gmet_0366 hypothetical protein YP_003699674.1 PFAM: protein of unknown function DUF1447 YP_003699675.1 TIGRFAM: peptide deformylase; KEGG: pin:Ping_3323 peptide deformylase; PFAM: formylmethionine deformylase YP_003699676.1 PFAM: Cell-wall binding lipoprotein YkyA, putative; KEGG: viral A-type inclusion protein YP_003699677.1 PFAM: protein of unknown function DUF342; KEGG: spc:Sputcn32_3165 hypothetical protein YP_003699678.1 TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; KEGG: gme:Gmet_2509 dehydrogenase, E1 component; PFAM: dehydrogenase E1 component YP_003699679.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gem:GM21_0476 transketolase central region YP_003699680.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bba:Bd0779 pyruvate dehydrogenase E2 YP_003699681.1 KEGG: bba:Bd0778 dihydrolipoamide dehydrogenase, E3 subunit; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003699682.1 PFAM: polysaccharide deacetylase; KEGG: wol:WD0720 polysaccharide deacetylase, putative YP_003699683.1 PFAM: Peptidase M23; KEGG: BRD group protein YP_003699686.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: hypothetical protein YP_003699687.1 PFAM: protein of unknown function UPF0223 YP_003699688.1 PFAM: protein of unknown function DUF1054; KEGG: afw:Anae109_0622 hypothetical protein YP_003699690.1 PFAM: inositol monophosphatase; KEGG: similar to GA14281-PA ; K01092 myo-inositol-1(or 4)-monophosphatase YP_003699693.1 PFAM: Protein of unknown function DUF2197 YP_003699694.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rec:RHECIAT_CH0002735 hypothetical protein YP_003699696.1 PFAM: protein of unknown function DUF1507 YP_003699697.1 PFAM: Ferritin Dps family protein; KEGG: dze:Dd1591_2829 ferritin Dps family protein YP_003699698.1 PFAM: cytochrome oxidase assembly; KEGG: gur:Gura_0405 cytochrome oxidase assembly YP_003699699.1 KEGG: pau:PA14_47150 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_003699700.1 KEGG: hypothetical protein; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I YP_003699701.1 TIGRFAM: cytochrome c oxidase, subunit I; KEGG: hypothetical protein; PFAM: cytochrome c oxidase subunit I YP_003699702.1 PFAM: cytochrome C oxidase subunit IV; KEGG: rme:Rmet_5790 cytochrome c oxidase subunit IV YP_003699703.1 PFAM: protein of unknown function DUF420; KEGG: ank:AnaeK_0947 protein of unknown function DUF420 YP_003699704.1 KEGG: abb:ABBFA_000876 hypothetical protein; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118 YP_003699706.1 PFAM: SCP-like extracellular; KEGG: noc:Noc_1373 hypothetical protein YP_003699707.1 PFAM: protein of unknown function DUF1333; KEGG: GM19576 gene product from transcript GM19576-RA YP_003699708.1 PFAM: Uncharacterised protein family UPF0298 YP_003699709.1 KEGG: mxa:MXAN_3384 putative methyltransferase; TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative YP_003699710.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: gur:Gura_2500 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_003699711.1 KEGG: bas:BUsg461 ATP-dependent protease La YP_003699712.1 PFAM: protein of unknown function DUF795; KEGG: pca:Pcar_2281 nucleotidyltransferase YP_003699713.1 PFAM: protein of unknown function DUF177 YP_003699714.1 KEGG: pca:Pcar_1434 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003699715.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_0261 multifunctional fatty acid oxidation complex subunit alpha YP_003699716.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vha:VIBHAR_05633 hypothetical protein YP_003699717.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: tau:Tola_0794 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003699719.1 PFAM: protein of unknown function UCP012535; KEGG: mxa:MXAN_6193 hypothetical protein YP_003699721.1 KEGG: sat:SYN_01736 cell division protein; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_003699722.1 KEGG: geo:Geob_0772 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_003699723.1 TIGRFAM: cell division protein FtsL; PFAM: Septum formation initiator YP_003699724.1 PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; KEGG: sat:SYN_01739 division specific D,D-transpeptidase / cell division protein; SMART: PASTA domain containing protein YP_003699725.1 KEGG: dat:HRM2_12660 MurE; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003699726.1 PFAM: cytoplasmic peptidoglycan synthetase domain protein; KEGG: hypothetical protein YP_003699727.1 KEGG: dma:DMR_33300 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_003699728.1 KEGG: gsu:GSU3071 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003699729.1 TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: mxa:MXAN_5604 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_003699730.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: mfa:Mfla_2267 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_003699731.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: glo:Glov_0666 polypeptide-transport-associated domain protein FtsQ-type YP_003699732.1 PFAM: protein of unknown function DUF881; KEGG: conserved hypothetical protein YP_003699733.1 PFAM: protein of unknown function DUF881 YP_003699735.1 KEGG: noc:Noc_2856 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_003699736.1 KEGG: pca:Pcar_2196 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_003699737.1 PFAM: alanine racemase domain protein; KEGG: sat:SYN_00571 alanine racemase domain-containing protein YP_003699738.1 PFAM: protein of unknown function DUF552 YP_003699739.1 PFAM: protein of unknown function YGGT; KEGG: csa:Csal_3056 protein of unknown function YGGT YP_003699740.1 KEGG: bba:Bd0464 cell division protein DivIVA homologue; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein YP_003699741.1 KEGG: pca:Pcar_2455 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_003699742.1 KEGG: geo:Geob_0391 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_003699743.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: gsu:GSU0082 ribosomal large subunit pseudouridine synthase D; SMART: RNA-binding S4 domain protein YP_003699745.1 KEGG: sat:SYN_03702 uracil phosphoribosyltransferase / pyrimidine operon regulatory protein; PFAM: phosphoribosyltransferase YP_003699746.1 KEGG: afw:Anae109_0056 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_003699747.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: gem:GM21_2312 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003699748.1 KEGG: dat:HRM2_27770 PyrC; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_003699749.1 KEGG: pca:Pcar_1613 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003699750.1 KEGG: dal:Dalk_3481 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; RimK domain protein ATP-grasp; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein YP_003699751.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: gem:GM21_1819 oxidoreductase FAD/NAD(P)-binding domain protein YP_003699752.1 TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: dps:DP3015 dihydroorotate dehydrogenase, catalytic subunit; PFAM: dihydroorotate oxidase YP_003699753.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: shl:Shal_2049 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003699754.1 KEGG: cbc:CbuK_0493 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003699755.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: neu:NE2190 integron/retron-type RNA-directed DNA polymerase YP_003699757.1 KEGG: aav:Aave_3979 ABC transporter-related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003699758.1 KEGG: ara:Arad_2404 multidrug ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003699759.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: pca:Pcar_1454 RNA-binding protein YP_003699760.1 PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: gsu:GSU2239 hypothetical protein YP_003699761.1 PFAM: protein of unknown function DUF370; KEGG: sfu:Sfum_3631 hypothetical protein YP_003699762.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: rms:RMA_1210 guanylate kinase; PFAM: guanylate kinase YP_003699763.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_003699764.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: gem:GM21_2546 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003699765.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; KEGG: gur:Gura_0374 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein YP_003699766.1 KEGG: gbm:Gbem_0635 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_003699767.1 KEGG: gbm:Gbem_3528 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_003699768.1 PFAM: Protein phosphatase 2C-like; KEGG: pna:Pnap_3950 protein phosphatase 2C domain-containing protein; SMART: protein phosphatase 2C domain protein YP_003699769.1 KEGG: azo:azo3774 putative serine/threonine protein kinase; PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein YP_003699770.1 KEGG: spl:Spea_3548 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_003699771.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: gme:Gmet_0067 ribulose-5-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003699772.1 TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ YP_003699773.1 KEGG: dat:HRM2_18060 ThiN; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; Thiamin pyrophosphokinase vitamin B1-binding region YP_003699774.1 KEGG: dol:Dole_2056 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_003699775.1 PFAM: protein of unknown function DUF322 YP_003699776.1 KEGG: dde:Dde_1644 DegV family protein; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase YP_003699777.1 KEGG: dvl:Dvul_1226 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003699778.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: ppw:PputW619_3319 L-serine ammonia-lyase; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein YP_003699779.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; KEGG: dde:Dde_3111 L-serine ammonia-lyase; PFAM: serine dehydratase alpha chain YP_003699780.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; type III restriction protein res subunit; KEGG: bba:Bd2324 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_003699781.1 KEGG: nis:NIS_1047 hypothetical protein YP_003699782.1 KEGG: gsu:GSU1600 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_003699783.1 KEGG: gsu:GSU1602 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_003699784.1 KEGG: mxa:MXAN_4770 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase YP_003699785.1 KEGG: gem:GM21_1157 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_003699786.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: ade:Adeh_1650 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_003699788.1 PFAM: protein of unknown function DUF1128 YP_003699789.1 KEGG: Bartomin ; K03529 chromosome segregation protein; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein YP_003699790.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: sat:SYN_00465 cell division protein FtsY; SMART: AAA ATPase YP_003699791.1 PFAM: putative helix-turn-helix protein YlxM/p13 family protein YP_003699792.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: sfu:Sfum_3038 signal recognition particle protein; SMART: AAA ATPase YP_003699793.1 KEGG: ppd:Ppro_1098 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_003699794.1 KEGG: dol:Dole_2308 hypothetical protein YP_003699795.1 KEGG: PAS domain S-box family protein YP_003699796.1 KEGG: gme:Gmet_2869 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_003699797.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: sat:SYN_00768 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003699798.1 KEGG: hypothetical protein; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_003699799.1 TIGRFAM: signal peptidase I; KEGG: mfa:Mfla_1005 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_003699800.1 KEGG: vha:VIBHAR_06087 ribosomal biogenesis GTPase; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related YP_003699801.1 KEGG: mxa:MXAN_2574 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_003699802.1 KEGG: GK17402 gene product from transcript GK17402-RA YP_003699803.1 KEGG: cco:CCC13826_0839 FlhB domain-containing protein YP_003699804.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: bba:Bd3810 succinyl-CoA synthetase beta chain; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YP_003699805.1 KEGG: gbm:Gbem_1465 succinyl-CoA synthetase, alpha subunit; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein YP_003699806.1 KEGG: gme:Gmet_0890 smf protein; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_003699807.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: mxa:MXAN_3002 putative DNA protecting protein DprA/DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein YP_003699808.1 KEGG: gur:Gura_4012 tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_003699809.1 PFAM: 20S proteasome A and B subunits; KEGG: lip:LI0732 ATP-dependent protease peptidase subunit YP_003699810.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: pca:Pcar_2412 ATP-dependent protease ATP-binding subunit; SMART: AAA ATPase YP_003699811.1 TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein YP_003699812.1 KEGG: sgl:SG0030 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_003699813.1 KEGG: nis:NIS_0622 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein YP_003699814.1 KEGG: hha:Hhal_0499 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_003699815.1 KEGG: glo:Glov_3304 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_003699816.1 KEGG: gme:Gmet_3111 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_003699817.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dal:Dalk_0669 flagellar assembly protein FliH YP_003699818.1 SMART: AAA ATPase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; KEGG: sat:SYN_01473 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003699819.1 TIGRFAM: flagellar export protein FliJ; KEGG: bba:Bd3400 flagellar basal body formation protein FliJ YP_003699820.1 KEGG: hypothetical protein LOC100150943 YP_003699821.1 PFAM: flagellar hook-length control protein; KEGG: dvu:DVU1445 flagellar hook-length control domain-containing protein YP_003699822.1 PFAM: flagellar hook capping protein; KEGG: lip:LI0567 flagellar hook capping protein YP_003699823.1 TIGRFAM: flagellar operon protein; KEGG: geo:Geob_0502 flagellar operon protein YP_003699824.1 KEGG: ade:Adeh_1387 hypothetical protein; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003699825.1 PFAM: flagellar FlbD family protein; KEGG: gme:Gmet_0462 flagellar protein YP_003699826.1 PFAM: flagellar basal body-associated protein FliL; KEGG: dps:DP2667 flagellar protein (FliL) YP_003699827.1 KEGG: hhe:HH1147 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_003699828.1 KEGG: bbr:BB2580 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein YP_003699829.1 KEGG: ank:AnaeK_4453 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003699830.1 PFAM: flagellar biosynthesis protein FliO; KEGG: sat:SYN_03207 flagellar biosynthetic protein YP_003699831.1 KEGG: glo:Glov_3290 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_003699832.1 KEGG: csa:Csal_1966 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_003699833.1 KEGG: cjd:JJD26997_0550 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_003699834.1 KEGG: sat:SYN_02832 flagellar biosynthesis pathway component; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_003699835.1 KEGG: dal:Dalk_1003 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_003699836.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gme:Gmet_0428 NifH/FrxC:cobyrinic acid a,c-diamide synthase YP_003699837.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: dde:Dde_1571 response regulator receiver domain-containing protein; SMART: response regulator receiver YP_003699838.1 PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: nam:NAMH_0362 chemotaxis protein CheA; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_003699839.1 KEGG: dvm:DvMF_0284 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_003699840.1 PFAM: CheC domain protein; KEGG: gsu:GSU3200 chemotaxis protein CheC YP_003699841.1 PFAM: CheD family protein; KEGG: gme:Gmet_3209 CheD, stimulates methylation of MCP proteins YP_003699843.1 KEGG: gem:GM21_3848 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2 YP_003699844.1 PFAM: protein of unknown function DUF342; KEGG: sbp:Sbal223_0830 protein of unknown function DUF342 YP_003699846.1 KEGG: cla:Cla_1427 hypothetical protein YP_003699847.1 KEGG: ppd:Ppro_2044 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_003699848.1 KEGG: aeh:Mlg_1862 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_003699849.1 TIGRFAM: uridylate kinase; KEGG: pca:Pcar_1919 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003699850.1 KEGG: dvm:DvMF_2919 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_003699851.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: dat:HRM2_17140 UppS; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003699852.1 PFAM: phosphatidate cytidylyltransferase; KEGG: ftn:FTN_0232 phosphatidate cytidylyltransferase YP_003699853.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: sat:SYN_00916 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003699854.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: tgr:Tgr7_1166 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_003699855.1 TIGRFAM: prolyl-tRNA synthetase; KEGG: gsu:GSU1460 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_003699856.1 SMART: Exonuclease; phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; KEGG: gur:Gura_2507 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_003699857.1 PFAM: protein of unknown function DUF150; KEGG: gur:Gura_1898 hypothetical protein YP_003699858.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; KEGG: gbm:Gbem_1300 NusA antitermination factor; SMART: KH domain protein YP_003699859.1 PFAM: protein of unknown function DUF448; KEGG: sme:SMc02913 hypothetical protein YP_003699860.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: gur:Gura_1900 hypothetical protein YP_003699861.1 KEGG: glo:Glov_1669 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein YP_003699862.1 PFAM: protein of unknown function DUF503; KEGG: mxa:MXAN_2069 hypothetical protein YP_003699863.1 KEGG: pca:Pcar_1557 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_003699864.1 KEGG: rme:Rmet_2029 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_003699865.1 KEGG: sfu:Sfum_3182 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase YP_003699866.1 KEGG: dal:Dalk_4742 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_003699867.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: gsu:GSU1593 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup YP_003699868.1 KEGG: dal:Dalk_4744 peptidase M16 domain protein; PFAM: peptidase M16 domain protein YP_003699869.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: dvm:DvMF_2382 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_003699870.1 KEGG: dvm:DvMF_0276 aspartate kinase; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003699871.1 TIGRFAM: dihydrodipicolinate synthase; KEGG: ppd:Ppro_3063 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003699872.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: geo:Geob_3801 beta-lactamase domain protein YP_003699873.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: neu:NE2190 integron/retron-type RNA-directed DNA polymerase YP_003699874.1 KEGG: sat:SYN_01274 cell division protein; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase YP_003699875.1 KEGG: bgl:bglu_1g29010 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH YP_003699876.1 PFAM: peptidase M16 domain protein; KEGG: hypothetical protein YP_003699877.1 PFAM: peptidase M16 domain protein; KEGG: tdn:Suden_1225 peptidase M16-like YP_003699878.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sfu:Sfum_1374 3-oxoacyl-(acyl-carrier-protein) reductase YP_003699880.1 KEGG: hch:HCH_04457 hypothetical protein YP_003699881.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: gsu:GSU1825 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003699882.1 KEGG: dds:Ddes_1466 competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain YP_003699883.1 KEGG: dde:Dde_0152 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003699884.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: pca:Pcar_2405 recombinase A; SMART: AAA ATPase YP_003699885.1 SMART: metal-dependent phosphohydrolase HD region; KH domain protein; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; KEGG: sfu:Sfum_2578 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup YP_003699886.1 KEGG: sat:SYN_02978 calcineurin-like phosphoesterase YP_003699887.1 PFAM: Stage V sporulation protein S; KEGG: hypothetical protein YP_003699889.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_003699890.1 KEGG: dat:HRM2_41100 PorB3; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding YP_003699891.1 KEGG: amc:MADE_00067 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_003699892.1 TIGRFAM: pyridoxal phosphate-dependent acyltransferase ; 8-amino-7-oxononanoate synthase; KEGG: hypothetical protein; PFAM: aminotransferase class I and II; aminotransferase class-III; Orn/Lys/Arg decarboxylase major region; aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003699893.1 TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: ngk:NGK_0047 bifunctional enzyme involved in thiolation and methylation of tRNA; SMART: Elongator protein 3/MiaB/NifB YP_003699894.1 PFAM: protein of unknown function DUF1333 YP_003699895.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; KEGG: gme:Gmet_1424 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_003699896.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3633 transposase IS3/IS911 family protein YP_003699897.1 PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003699898.1 PFAM: protein of unknown function DUF548; KEGG: afw:Anae109_3415 hypothetical protein YP_003699899.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: gur:Gura_1771 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003699900.1 KEGG: ngk:NGK_0479 Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003699901.1 KEGG: hypothetical protein ; K03665 GTP-binding protein HflX; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related YP_003699902.1 PFAM: Aluminium resistance family protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: hypothetical protein YP_003699903.1 TIGRFAM: glutamine synthetase, type I; KEGG: dps:DP0930 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003699904.1 TIGRFAM: LexA repressor; KEGG: ppd:Ppro_1572 SOS-response transcriptional repressor, LexA; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_003699906.1 PFAM: Resolvase domain; KEGG: eta:ETA_pET460080 resolvase YP_003699907.1 PFAM: protein of unknown function DUF896; KEGG: predicted gene, 100039038 YP_003699908.1 KEGG: dat:HRM2_48140 Tkt1; TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein YP_003699909.1 PFAM: protein of unknown function UPF0154 YP_003699910.1 KEGG: gem:GM21_2691 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein YP_003699911.1 PFAM: protein of unknown function DUF156; KEGG: nmu:Nmul_A2278 hypothetical protein YP_003699912.1 KEGG: nmu:Nmul_A2276 heavy metal translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003699913.1 PFAM: Heavy metal transport/detoxification protein; KEGG: prw:PsycPRwf_1666 copper ion binding protein YP_003699914.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dar:Daro_1839 cytochrome c biogenesis protein YP_003699916.1 PFAM: protein of unknown function DUF1453 YP_003699918.1 KEGG: dol:Dole_2685 TraB family protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein YP_003699921.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: esa:ESA_02926 hypothetical protein; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YP_003699922.1 KEGG: hypothetical protein; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003699923.1 KEGG: kpe:KPK_2717 hypothetical protein YP_003699924.1 KEGG: nis:NIS_0787 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003699925.1 PFAM: RDD domain containing protein YP_003699926.1 PFAM: sodium:dicarboxylate symporter; KEGG: ilo:IL2299 Na+/H+-dicarboxylate symporter YP_003699927.1 SMART: EAL domain protein; GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: sfr:Sfri_0415 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein YP_003699928.1 KEGG: swd:Swoo_3130 transcriptional regulator, CdaR YP_003699929.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: dvm:DvMF_0931 molybdopterin oxidoreductase YP_003699930.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shl:Shal_4012 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003699931.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: ccv:CCV52592_2104 cytoplasmic chaperone YP_003699932.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: ccv:CCV52592_2107 anaerobic dimethyl sulfoxide reductase subunit A YP_003699933.1 KEGG: pmr:PMI2965 anaerobic reductase component B; TIGRFAM: dimethylsulfoxide reductase, chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003699934.1 KEGG: esa:ESA_01917 hypothetical protein YP_003699935.1 TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; PFAM: Radical SAM domain protein; KEGG: bpy:Bphyt_4252 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003699936.1 TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit; PFAM: Radical SAM domain protein; KEGG: cps:CPS_4049 FO synthase subunit 1; SMART: Elongator protein 3/MiaB/NifB YP_003699937.1 KEGG: dma:DMR_35850 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003699939.1 KEGG: bbt:BBta_1696 putative alpha/beta hydrolase superfamily protein YP_003699940.1 KEGG: pca:Pcar_0832 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3 YP_003699941.1 KEGG: mei:Msip34_0440 hypothetical protein YP_003699943.1 TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: dal:Dalk_4347 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase; Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003699944.1 KEGG: lpp:lpp1659 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein YP_003699945.1 PFAM: VanZ family protein; KEGG: pol:Bpro_0247 VanZ like protein YP_003699946.1 KEGG: viral A-type inclusion protein YP_003699947.1 KEGG: bra:BRADO4942 CbxX/CfqX family protein; PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003699948.1 PFAM: thioesterase superfamily protein; KEGG: pca:Pcar_1492 putative thioesterase YP_003699950.1 KEGG: dze:Dd1591_1960 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase YP_003699951.1 KEGG: afw:Anae109_1278 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_003699952.1 KEGG: azo:azo2879 ammonia permease YP_003699953.1 PFAM: SNARE associated Golgi protein; KEGG: dps:DP1650 hypothetical protein YP_003699957.1 PFAM: amidohydrolase 2; KEGG: ara:Arad_7863 amidohydrolase protein YP_003699959.1 KEGG: hypothetical protein ; K01802 peptidylprolyl isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_003699960.1 KEGG: acp:A2cp1_4280 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003699961.1 KEGG: dia:Dtpsy_1057 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003699962.1 KEGG: sde:Sde_3735 heavy metal efflux pump CzcA YP_003699963.1 KEGG: vpa:VPA0034 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003699964.1 KEGG: hac:Hac_1596 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003699965.1 KEGG: spc:Sputcn32_3357 copper ABC transporter, permease protein YP_003699967.1 KEGG: dma:DMR_26640 chemotaxis protein CheV; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver YP_003699969.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: nam:NAMH_0242 pyruvate synthase subunit PorA YP_003699970.1 KEGG: sat:SYN_00157 pyruvate:ferredoxin oxidoreductase gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003699971.1 KEGG: tmz:Tmz1t_2132 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003699972.1 KEGG: dvm:DvMF_0594 intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein YP_003699973.1 PFAM: alpha/beta hydrolase fold; KEGG: maq:Maqu_2822 alpha/beta hydrolase fold YP_003699974.1 PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_0091 major facilitator superfamily MFS_1 YP_003699975.1 PFAM: Acetamidase/Formamidase; KEGG: dvm:DvMF_1872 acetamidase/formamidase YP_003699976.1 KEGG: sat:SYN_00383 DEAD/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; Protein of unknown function DUF1998; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003699977.1 KEGG: mxa:MXAN_3832 hypothetical protein YP_003699978.1 KEGG: pfl:PFL_5702 CBS domain-containing protein; PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; cyclic nucleotide-binding; CBS domain containing protein; SMART: cyclic nucleotide-binding YP_003699979.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: lch:Lcho_0238 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III YP_003699980.1 PFAM: protein of unknown function DUF1273 YP_003699981.1 KEGG: GF11164 gene product from transcript GF11164-RA; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein YP_003699982.1 PFAM: ribonuclease H; KEGG: mxa:MXAN_5728 ribonuclease H YP_003699983.1 PFAM: putative RNA methylase; THUMP domain protein; KEGG: gur:Gura_3994 putative RNA methylase YP_003699984.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; KEGG: azo:azo1607 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_003699985.1 PFAM: HesB/YadR/YfhF-family protein YP_003699986.1 KEGG: fph:Fphi_0869 carboxypeptidase Taq; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase YP_003699987.1 KEGG: ara:Arad_8385 proline/glycine betaine ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_003699988.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: aap:NT05HA_1064 glycine betaine YP_003699989.1 PFAM: UspA domain protein; KEGG: dvm:DvMF_1529 UspA domain protein YP_003699990.1 PFAM: CoA-binding domain protein; KEGG: tbd:Tbd_2525 hypothetical protein YP_003699991.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: gme:Gmet_0004 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein YP_003699992.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: nam:NAMH_0664 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003699993.1 PFAM: Protein of unknown function DUF2203; KEGG: scl:sce9302 hypothetical protein YP_003699994.1 KEGG: vpa:VP1640 hypothetical protein; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase YP_003699996.1 KEGG: hha:Hhal_2078 S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related YP_003699997.1 KEGG: vha:VIBHAR_00463 protoporphyrinogen oxidase YP_003700000.1 PFAM: MOSC domain containing protein; KEGG: son:SO_0018 hypothetical protein YP_003700001.1 PFAM: metallophosphoesterase; KEGG: apa:APP7_1044 hypothetical protein YP_003700002.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; KEGG: dar:Daro_0018 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003700003.1 KEGG: psb:Psyr_3786 RNA binding S1 YP_003700004.1 KEGG: threonine dehydratase family protein; K01754 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain protein YP_003700005.1 KEGG: mei:Msip34_1204 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1 YP_003700006.1 KEGG: scl:sce5394 glycerol-1-phosphate dehydrogenase (NAD(P)(+)); PFAM: 3-dehydroquinate synthase YP_003700007.1 KEGG: rfr:Rfer_3777 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_003700008.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: tgr:Tgr7_3131 cyclic nucleotide-binding domain (cNMP-BD) protein YP_003700009.1 KEGG: ade:Adeh_2218 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003700010.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbr:BB0062 hypothetical protein YP_003700011.1 KEGG: ebr:ECB_00737 hypothetical protein YP_003700012.1 PFAM: beta-lactamase; KEGG: avi:Avi_2236 amide hydrolase YP_003700013.1 PFAM: amino acid-binding ACT domain protein; KEGG: cco:CCC13826_1470 hypothetical protein YP_003700014.1 PFAM: protein of unknown function DUF711; KEGG: pca:Pcar_2119 hypothetical protein YP_003700016.1 SMART: PUA domain containing protein; TIGRFAM: glutamate 5-kinase; KEGG: nma:NMA1268 gamma-glutamyl kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein YP_003700017.1 KEGG: fph:Fphi_0608 glutamate-5-semialdehyde dehydrogenase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase YP_003700018.1 KEGG: nmc:NMC1099 putative GTP-binding protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein YP_003700019.1 TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; KEGG: hha:Hhal_1732 L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003700020.1 KEGG: aeh:Mlg_1191 diaminobutyrate--2-oxoglutarate aminotransferase; TIGRFAM: diaminobutyrate/2-oxoglutarate aminotransferase; 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III YP_003700021.1 KEGG: tcx:Tcr_0520 L-ectoine synthase; PFAM: Ectoine synthase; Cupin 2 conserved barrel domain protein YP_003700022.1 TIGRFAM: membrane protein AbrB duplication; KEGG: pmy:Pmen_1454 putative ammonia monooxygenase YP_003700023.1 TIGRFAM: membrane protein AbrB duplication; KEGG: dac:Daci_1117 membrane protein AbrB duplication YP_003700024.1 PFAM: integrase family protein; KEGG: dma:DMR_30250 site-specific recombinase YP_003700025.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: swp:swp_4717 hypothetical protein YP_003700027.1 KEGG: geo:Geob_2372 ribonuclease H; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2 YP_003700028.1 KEGG: tcx:Tcr_1313 hypothetical protein YP_003700029.1 KEGG: psa:PST_2084 hypothetical protein YP_003700030.1 KEGG: dol:Dole_2663 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003700032.1 KEGG: pca:Pcar_2418 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_003700033.1 TIGRFAM: argininosuccinate synthase; KEGG: nis:NIS_0998 argininosuccinate synthase; PFAM: argininosuccinate synthase; Queuosine synthesis-like YP_003700034.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: tgr:Tgr7_2465 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003700035.1 KEGG: ppd:Ppro_2524 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; RimK domain protein ATP-grasp; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein YP_003700036.1 KEGG: pca:Pcar_1613 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain YP_003700037.1 KEGG: sat:SYN_02155 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_003700038.1 KEGG: dds:Ddes_0190 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003700039.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: argJ; N-acetylglutamate synthetase ; K00620 amino-acid N-acetyltransferase; PFAM: arginine biosynthesis protein ArgJ YP_003700040.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: gur:Gura_1051 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_003700041.1 KEGG: dat:HRM2_06130 Cls; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_003700042.1 PFAM: beta-lactamase; KEGG: xca:xccb100_0239 beta-lactamase-like hydrolase YP_003700043.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: dal:Dalk_4702 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_003700044.1 KEGG: mlo:mll4282 organic hydroperoxide resistance protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_003700045.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: dal:Dalk_1073 NADH:flavin oxidoreductase/NADH oxidase YP_003700046.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: sme:SM_b20028 hypothetical protein YP_003700048.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: asu:Asuc_0591 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_003700049.1 KEGG: gme:Gmet_2630 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700050.1 PFAM: protein of unknown function DUF952 YP_003700051.1 PFAM: SMC domain protein; KEGG: dps:DP0526 ATP-dependent dsDNA exonuclease (SBCC) YP_003700052.1 KEGG: saz:Sama_1267 exonuclease SbcD, putative; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase YP_003700053.1 TIGRFAM: recombination helicase AddA; KEGG: bja:blr8088 hypothetical protein; PFAM: UvrD/REP helicase YP_003700054.1 TIGRFAM: ATP-dependent nuclease subunit B; KEGG: hypothetical protein YP_003700055.1 PFAM: protein of unknown function DUF939; KEGG: dma:DMR_35100 hypothetical membrane protein YP_003700056.1 PFAM: SNARE associated Golgi protein; KEGG: wsu:WS0198 hypothetical protein YP_003700057.1 PFAM: FAD dependent oxidoreductase; KEGG: mes:Meso_1828 FAD dependent oxidoreductase YP_003700058.1 TIGRFAM: dihydrodipicolinate synthase; KEGG: sat:SYN_02161 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003700061.1 TIGRFAM: formate acetyltransferase; KEGG: dar:Daro_2096 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_003700062.1 TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: pmu:PM0077 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM domain protein YP_003700063.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: glo:Glov_2595 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003700065.1 KEGG: mes:Meso_1746 protease Do YP_003700066.1 KEGG: dal:Dalk_4651 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_003700067.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: lhk:LHK_02980 DUF6 domain containing protein YP_003700070.1 PFAM: Amidase; KEGG: dol:Dole_2535 amidase YP_003700071.1 PFAM: Na+/Picotransporter; KEGG: cja:CJA_3145 Na/Pi cotransporter family protein YP_003700073.1 KEGG: vvy:VVA0521 sn-glycerol-3-phosphate dehydrogenase subunit C; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003700074.1 KEGG: msu:MS1994 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_003700075.1 KEGG: ppr:PBPRA1372 sn-glycerol-3-phosphate dehydrogenase subunit A; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein YP_003700076.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cja:CJA_0838 hypothetical protein YP_003700077.1 PFAM: OsmC family protein; KEGG: rma:Rmag_0833 OsmC family protein YP_003700078.1 TIGRFAM: 6-phosphofructokinase; KEGG: aha:AHA_2383 6-phosphofructokinase; PFAM: phosphofructokinase YP_003700079.1 PFAM: flagellar basal body-associated protein FliL YP_003700080.1 PFAM: Na+/H+ antiporter NhaC-like; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: csa:Csal_1651 Na+/H+ antiporter NhaC YP_003700081.1 PFAM: aminotransferase class IV; KEGG: tgr:Tgr7_2706 D-amino-acid transaminase YP_003700082.1 KEGG: gme:Gmet_0956 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_003700083.1 KEGG: hypothetical protein LOC100197724 YP_003700084.1 KEGG: scl:sce9074 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700086.1 KEGG: lpp:lpp1137 hypothetical protein YP_003700087.1 PFAM: transcriptional regulator PadR family protein; KEGG: aci:ACIAD0154 putative transcriptional regulator YP_003700089.1 PFAM: YolD-like protein YP_003700090.1 KEGG: geo:Geob_3171 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_003700091.1 SMART: GGDEF domain containing protein; response regulator receiver; TIGRFAM: diguanylate cyclase; KEGG: maq:Maqu_3442 response regulator receiver modulated diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver YP_003700092.1 KEGG: dvm:DvMF_2237 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003700093.1 KEGG: mes:Meso_0252 putative lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_003700094.1 PFAM: protein of unknown function DUF342; KEGG: vfm:VFMJ11_1588 hypothetical cytosolic protein YP_003700095.1 KEGG: lhk:LHK_01689 BetT; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_003700096.1 KEGG: gsu:GSU2433 ATP-dependent protease, putative YP_003700097.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; KEGG: gme:Gmet_0987 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003700098.1 TIGRFAM: methionine gamma-lyase; KEGG: ilo:IL0726 methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003700100.1 KEGG: pha:PSHAa0650 lincomycin resistance protein LmrB; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003700101.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: neu:NE2190 integron/retron-type RNA-directed DNA polymerase YP_003700104.1 PFAM: FAD dependent oxidoreductase; KEGG: hypothetical protein ; K09835 carotenoid isomerase YP_003700105.1 KEGG: dol:Dole_0426 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003700106.1 KEGG: noc:Noc_0864 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region YP_003700107.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dvl:Dvul_0075 LysR family transcriptional regulator YP_003700108.1 KEGG: similar to tetratricopeptide repeat domain 27 YP_003700109.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: pla:Plav_2856 methyltransferase type 12 YP_003700110.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003700111.1 PFAM: GumN family protein; KEGG: tau:Tola_0905 GumN family protein YP_003700113.1 PFAM: Dynamin family protein; GTP-binding protein HSR1-related; KEGG: hypothetical protein YP_003700114.1 KEGG: pla:Plav_1455 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003700115.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: ara:Arad_4332 2-oxoglutarate dehydrogenase, E1 component; PFAM: dehydrogenase E1 component; Transketolase central region YP_003700116.1 PFAM: aminotransferase class I and II; KEGG: lpc:LPC_0093 aspartate aminotransferase A YP_003700117.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B1213 lipolytic protein YP_003700118.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: aeh:Mlg_0176 penicillin-binding protein 6 YP_003700119.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: vco:VC0395_0557 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase B YP_003700120.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: dal:Dalk_4702 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_003700121.1 KEGG: hypothetical protein; PFAM: peptidase M19 renal dipeptidase YP_003700122.1 KEGG: tdn:Suden_1049 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_003700124.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sun:SUN_0967 acetyl-CoA synthetase YP_003700125.1 PFAM: Aldehyde Dehydrogenase; KEGG: gsu:GSU1108 aldehyde dehydrogenase family protein YP_003700126.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: nme:NMB0390 maltose phosphorylase YP_003700127.1 KEGG: pmr:PMI0289 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003700128.1 PFAM: protein of unknown function DUF420; KEGG: scl:sce6560 hypothetical protein YP_003700129.1 PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_0933 major facilitator superfamily protein, putative oxalate:formate antiporter YP_003700131.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: oan:Oant_3953 major facilitator transporter YP_003700133.1 PFAM: Patatin; KEGG: spc:Sputcn32_3501 patatin YP_003700134.1 KEGG: dal:Dalk_2597 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; Contains selenocysteine; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_003700135.1 KEGG: dvu:DVU1942 DAK2 and DegV domain-containing protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003700136.1 PFAM: deoxynucleoside kinase; KEGG: abo:ABO_0338 deoxynucleoside kinase YP_003700137.1 PFAM: deoxynucleoside kinase; KEGG: hypothetical protein YP_003700138.1 KEGG: hypothetical protein YP_003700140.1 KEGG: hac:Hac_1172 putative sec-independant protein translocase; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_003700141.1 KEGG: dat:HRM2_06850 TatA; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003700143.1 PFAM: diacylglycerol kinase catalytic region; KEGG: hypothetical protein ; K07029 YP_003700144.1 PFAM: protein of unknown function DUF833; KEGG: sse:Ssed_4437 hypothetical protein YP_003700146.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gme:Gmet_2721 diguanylate cyclase with GAF sensor; SMART: GGDEF domain containing protein; GAF domain protein YP_003700147.1 PFAM: toxic anion resistance family protein; KEGG: hch:HCH_05411 uncharacterized protein involved in tellurite resistance YP_003700148.1 KEGG: hypothetical protein YP_003700150.1 PFAM: membrane-flanked domain; KEGG: shl:Shal_3424 membrane-flanked domain-containing protein YP_003700151.1 PFAM: membrane-flanked domain; KEGG: amc:MADE_01634 hypothetical protein YP_003700153.1 KEGG: dma:DMR_33470 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein YP_003700154.1 PFAM: metallophosphoesterase; KEGG: scl:sce8469 putative protein phosphatase YP_003700155.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gsu:GSU1321 thioredoxin family protein YP_003700156.1 KEGG: ajs:Ajs_1362 thioredoxin YP_003700157.1 PFAM: isochorismatase hydrolase; KEGG: sfu:Sfum_2603 isochorismatase hydrolase YP_003700158.1 PFAM: CBS domain containing protein; KEGG: dvl:Dvul_0535 CBS domain-containing protein YP_003700161.1 TIGRFAM: recombination protein U; PFAM: Recombination protein U YP_003700162.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: glo:Glov_0389 penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003700163.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: sfu:Sfum_1062 endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop YP_003700164.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region YP_003700165.1 KEGG: acp:A2cp1_2912 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB-fold tRNA/helicase-type YP_003700166.1 PFAM: aminotransferase class I and II; KEGG: gur:Gura_2501 aminotransferase, class I and II YP_003700168.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sfu:Sfum_2961 amidohydrolase YP_003700169.1 SMART: helicase c2; Exonuclease; DEAD-like helicase; TIGRFAM: DnaQ family exonuclease/DinG family helicase; DNA polymerase III, epsilon subunit; KEGG: glo:Glov_3621 helicase C2; PFAM: Exonuclease RNase T and DNA polymerase III YP_003700170.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: nmn:NMCC_1195 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase YP_003700171.1 TIGRFAM: pantoate/beta-alanine ligase; KEGG: cjd:JJD26997_1667 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003700172.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: sat:SYN_02773 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003700173.1 KEGG: mxa:MXAN_4152 BirA bifunctional protein; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein YP_003700174.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: sat:SYN_01518 poly A polymerase YP_003700175.1 PFAM: glycosyl transferase group 1; KEGG: hypothetical protein YP_003700176.1 PFAM: LmbE family protein; KEGG: hypothetical protein YP_003700177.1 TIGRFAM: methylglyoxal synthase; KEGG: cti:RALTA_A0877 methylglyoxal synthase; PFAM: MGS domain protein YP_003700178.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: pin:Ping_3648 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; oxidoreductase domain protein YP_003700179.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: fph:Fphi_0361 pyrophosphatase YP_003700180.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: sat:SYN_01478 hypothetical protein YP_003700181.1 PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: tgr:Tgr7_3069 peptidase, membrane zinc metallopeptidase, putative YP_003700182.1 PFAM: protein of unknown function DUF1405 YP_003700183.1 KEGG: sfu:Sfum_0445 cytochrome b/b6 domain-containing protein YP_003700184.1 PFAM: Cytochrome b/b6 domain; KEGG: petB; cytochrome B6 YP_003700185.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gur:Gura_2379 Rieske (2Fe-2S) domain-containing protein YP_003700187.1 PFAM: Protein of unknown function UPF0302 ; conserved hypothetical protein YP_003700188.1 SMART: Tetratricopeptide repeat; KEGG: TPR Domain containing protein YP_003700189.1 KEGG: gbm:Gbem_3258 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003700190.1 KEGG: geo:Geob_2360 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; amino acid-binding ACT domain protein; 6-phosphogluconate dehydrogenase NAD-binding YP_003700191.1 KEGG: asu:Asuc_0923 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003700192.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: sat:SYN_01941 tryptophan synthase alpha chain; PFAM: tryptophan synthase alpha chain YP_003700193.1 KEGG: bpy:Bphyt_6842 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_003700194.1 KEGG: pca:Pcar_0733 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_003700195.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: pmy:Pmen_3945 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_003700196.1 TIGRFAM: anthranilate synthase component I; KEGG: dps:DP1619 anthranilate synthase, component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003700197.1 TIGRFAM: chorismate mutase; KEGG: ftm:FTM_0426 chorismate mutase; PFAM: Chorismate mutase of the AroH class YP_003700198.1 KEGG: rpi:Rpic_3247 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003700199.1 TIGRFAM: chorismate synthase; KEGG: gsu:GSU2027 chorismate synthase; PFAM: chorismate synthase YP_003700200.1 PFAM: MCP methyltransferase CheR-type; KEGG: bph:Bphy_6399 signal transduction histidine kinase with CheB and CheR activity; SMART: MCP methyltransferase CheR-type YP_003700201.1 PFAM: nucleoside diphosphate kinase; KEGG: similar to NME1-NME2 protein ; K00940 nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003700202.1 TIGRFAM: heptaprenyl diphosphate synthase component II; KEGG: xfn:XfasM23_0657 polyprenyl synthetase; PFAM: Polyprenyl synthetase YP_003700203.1 PFAM: protein of unknown function DUF178; KEGG: gur:Gura_1828 hypothetical protein YP_003700204.1 KEGG: gur:Gura_4282 prenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase YP_003700205.1 KEGG: dda:Dd703_3763 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12 YP_003700206.1 PFAM: Heptaprenyl diphosphate synthase subunit 1 YP_003700207.1 PFAM: tryptophan RNA-binding attenuator protein YP_003700208.1 TIGRFAM: GTP cyclohydrolase I; KEGG: hypothetical protein ; K01495 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_003700209.1 KEGG: hha:Hhal_0600 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003700212.1 KEGG: gem:GM21_0007 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; NADP oxidoreductase coenzyme F420-dependent YP_003700213.1 PFAM: protein of unknown function DUF205; KEGG: vap:Vapar_3772 protein of unknown function DUF205 YP_003700214.1 KEGG: ppd:Ppro_1727 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein YP_003700215.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2; KEGG: rrj:RrIowa_0882 isopentenyl pyrophosphate isomerase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_003700216.1 PFAM: RNA binding S1 domain protein; KEGG: sat:SYN_03197 SSU ribosomal protein S1P YP_003700217.1 KEGG: gur:Gura_4298 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003700218.1 KEGG: pmu:PM0802 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_003700219.1 PFAM: type IV pilus assembly PilZ; KEGG: nmu:Nmul_A1606 YcgR YP_003700221.1 KEGG: hch:HCH_00950 hypothetical protein YP_003700222.1 PFAM: Asparaginase/glutaminase; KEGG: apa:APP7_0700 probable L-asparaginase YP_003700223.1 PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: flavin-containing monooxygenase family protein / FMO family protein YP_003700224.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: nme:NMB1476 glutamate dehydrogenase, NAD-specific YP_003700225.1 KEGG: mei:Msip34_1308 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003700226.1 KEGG: apa:APP7_0543 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS YP_003700227.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: dde:Dde_0046 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit YP_003700228.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dal:Dalk_2232 thiamine pyrophosphate protein domain protein TPP-binding YP_003700229.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: dal:Dalk_2231 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_003700230.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_0043 2-oxoglutarate ferredoxin oxidoreductase, delta subunit YP_003700231.1 KEGG: dal:Dalk_2229 putative ATP/GTP-binding protein YP_003700233.1 PFAM: Abortive infection protein; KEGG: vha:VIBHAR_06754 hypothetical protein YP_003700234.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein YP_003700235.1 KEGG: hypothetical protein YP_003700236.1 KEGG: gme:Gmet_3492 ferredoxin family protein, putative YP_003700237.1 KEGG: oan:Oant_3114 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003700239.1 KEGG: aci:ACIAD0132 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003700240.1 KEGG: sfu:Sfum_3649 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_003700241.1 KEGG: sfu:Sfum_0568 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003700242.1 KEGG: mei:Msip34_2147 ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_003700243.1 KEGG: dal:Dalk_1556 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_003700244.1 KEGG: sensory histidine protein kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003700245.1 KEGG: gbm:Gbem_1846 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003700246.1 KEGG: mpt:Mpe_A0434 putative cytochrome c asssembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein YP_003700247.1 PFAM: ResB family protein; KEGG: gme:Gmet_2901 ResB-like YP_003700248.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A1221 peroxiredoxin-like protein YP_003700249.1 KEGG: gme:Gmet_1217 ribosomal large subunit pseudouridine synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003700250.1 KEGG: hhe:HH1479 hypothetical protein YP_003700251.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0578 iron-sulfur protein precursor YP_003700254.1 KEGG: gem:GM21_1927 chromosome segregation and condensation protein, ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_003700255.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: gur:Gura_2249 chromosome segregation and condensation protein ScpA YP_003700256.1 PFAM: protein of unknown function DUF309; KEGG: dvm:DvMF_2231 protein of unknown function DUF309 YP_003700257.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: dal:Dalk_3315 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003700258.1 KEGG: afw:Anae109_2729 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_003700259.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: apa:APP7_0407 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_003700260.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: apa:APP7_0406 riboflavin biosynthesis protein; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_003700261.1 TIGRFAM: death-on-curing family protein; KEGG: ecv:APECO1_510 putative bacteriophage protein YP_003700263.1 PFAM: thioesterase superfamily protein; KEGG: dar:Daro_1078 thioesterase superfamily protein YP_003700264.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: wsu:WS0363 peptidyl-prolyl cis-trans isomerase YP_003700265.1 KEGG: prw:PsycPRwf_0348 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003700266.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: mxa:MXAN_5710 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like YP_003700267.1 KEGG: purine nucleoside phosphorylase I, inosine and guanosine-specific family protein; K03783 purine-nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1 YP_003700268.1 KEGG: purine nucleoside phosphorylase I, inosine and guanosine-specific family protein; K03783 purine-nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1 YP_003700269.1 TIGRFAM: phosphopentomutase; KEGG: pca:Pcar_2320 phosphopentomutase; PFAM: Phosphopentomutase domain protein; metalloenzyme domain protein YP_003700270.1 KEGG: sat:SYN_00952 integrase/recombinase; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_003700271.1 PFAM: ferric-uptake regulator; KEGG: pca:Pcar_1952 negative regulator of ferric uptake YP_003700272.1 PFAM: NUDIX hydrolase; KEGG: tbd:Tbd_0232 hypothetical protein YP_003700273.1 PFAM: aldo/keto reductase; KEGG: ank:AnaeK_3134 aldo/keto reductase YP_003700274.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tgr:Tgr7_0547 peroxiredoxin-like protein YP_003700275.1 PFAM: Bacitracin resistance protein BacA; KEGG: mxa:MXAN_6514 putative undecaprenol kinase YP_003700276.1 KEGG: similar to 4A11 antigen; sperm tail membrane antigen; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain YP_003700277.1 KEGG: dda:Dd703_3925 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase YP_003700278.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: gem:GM21_3729 short-chain dehydrogenase/reductase SDR YP_003700279.1 KEGG: gsu:GSU1898 hypothetical protein YP_003700280.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: mxa:MXAN_0902 acyltransferase domain-containing protein YP_003700281.1 PFAM: glycosyl transferase family 2; KEGG: gem:GM21_1665 glycosyl transferase family 2 YP_003700282.1 KEGG: mxa:MXAN_0895 phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_003700283.1 KEGG: phytoene synthase ; K02291 phytoene synthase; PFAM: Squalene/phytoene synthase YP_003700284.1 KEGG: hypothetical protein; TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_003700285.1 KEGG: mxa:MXAN_0895 phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_003700286.1 KEGG: mxa:MXAN_4067 ThiS family protein; TIGRFAM: MoaD family protein; PFAM: thiamineS protein YP_003700288.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: gsu:GSU0910 aldehyde:ferredoxin oxidoreductase, tungsten-containing; SMART: Aldehyde ferredoxin oxidoreductase YP_003700289.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: sfu:Sfum_0517 methyltransferase type 12 YP_003700290.1 KEGG: hsm:HSM_1286 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003700292.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_7194 short chain dehydrogenase/reductase family oxidoreductase YP_003700293.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: pca:Pcar_0397 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003700294.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_0202 amine oxidase, flavin-containing YP_003700295.1 PFAM: Ion transport protein; KEGG: spc:Sputcn32_0586 ion transport protein YP_003700296.1 KEGG: mlo:mlr2476 transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003700297.1 PFAM: OsmC family protein; KEGG: psa:PST_1886 redox protein, regulator of disulfide bond formation YP_003700298.1 PFAM: Bile acid:sodium symporter; KEGG: aeh:Mlg_0627 bile acid:sodium symporter YP_003700299.1 PFAM: CBS domain containing protein; KEGG: bja:blr4638 hypothetical protein YP_003700300.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pfs:PFLU3184 putative NADH oxidase YP_003700301.1 PFAM: cyclase/dehydrase; KEGG: afw:Anae109_0807 cyclase/dehydrase YP_003700302.1 KEGG: maq:Maqu_1305 hypothetical protein YP_003700303.1 KEGG: aav:Aave_4199 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003700304.1 KEGG: dol:Dole_0651 sucrose phosphorylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003700305.1 PFAM: protein of unknown function DUF327; KEGG: glo:Glov_0761 outer membrane chaperone Skp (OmpH) YP_003700306.1 PFAM: flagellin domain protein; KEGG: lpp:lpp1294 flagellin YP_003700307.1 KEGG: cff:CFF8240_0091 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_003700308.1 KEGG: sat:SYN_02821 flagellar biosynthetic protein YP_003700309.1 KEGG: hypothetical protein YP_003700310.1 KEGG: gur:Gura_1132 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_003700312.1 KEGG: rlt:Rleg2_4899 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003700313.1 KEGG: geo:Geob_2000 peptidase T-like protein; TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003700314.1 PFAM: carboxyl transferase; KEGG: mxa:MXAN_1113 propionyl-CoA carboxylase, beta subunit YP_003700315.1 KEGG: scl:sce1655 putative isobutyryl-CoA mutase, chain B; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: cobalamin B12-binding domain protein; Glyoxalase/bleomycin resistance protein/dioxygenase YP_003700316.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: gme:Gmet_3251 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase YP_003700317.1 PFAM: protein of unknown function DUF939; KEGG: vfm:VFMJ11_1016 hypothetical protein YP_003700319.1 PFAM: protein of unknown function DUF1094 YP_003700320.1 PFAM: periplasmic solute binding protein; KEGG: hsm:HSM_0813 high-affinity zinc transporter periplasmic component YP_003700321.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: pla:Plav_1455 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_003700322.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: ade:Adeh_1826 branched-chain alpha-keto acid dehydrogenase E1 component YP_003700323.1 KEGG: ade:Adeh_1827 3-methyl-2-oxobutanoate dehydrogenase (lipoamide); PFAM: dehydrogenase E1 component YP_003700324.1 KEGG: pla:Plav_3138 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A YP_003700325.1 KEGG: pca:Pcar_2852 butyrate kinase; TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase YP_003700326.1 PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase; KEGG: bba:Bd2028 leucine dehydrogenase YP_003700327.1 KEGG: bxe:Bxe_B0357 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_003700328.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; KEGG: sfu:Sfum_0303 sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase; PAS domain containing protein YP_003700330.1 TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; KEGG: sfu:Sfum_0654 response regulator receiver protein; SMART: response regulator receiver YP_003700331.1 KEGG: ppd:Ppro_1578 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_003700332.1 KEGG: afw:Anae109_0631 arginine repressor, ArgR; TIGRFAM: arginine repressor; PFAM: arginine repressor YP_003700333.1 TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: gur:Gura_2037 hemolysin A; SMART: RNA-binding S4 domain protein YP_003700334.1 KEGG: gsu:GSU0686 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein YP_003700335.1 KEGG: dda:Dd703_2263 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YP_003700336.1 PFAM: Polyprenyl synthetase; KEGG: predicted protein YP_003700337.1 KEGG: sfu:Sfum_1416 exodeoxyribonuclease VII, small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_003700338.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: ppr:PBPRA0779 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_003700339.1 KEGG: pol:Bpro_2675 methenyltetrahydrofolate cyclohydrolase; PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase YP_003700340.1 KEGG: mxa:MXAN_4761 transcription antitermination factor NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_003700341.1 PFAM: protein of unknown function DUF322 YP_003700342.1 KEGG: glo:Glov_1598 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; Carbamoyl-phosphate synthetase large chain domain protein YP_003700343.1 KEGG: scl:sce3923 acetyl-CoA carboxylase biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_003700346.1 KEGG: hypothetical protein ; K02356 elongation factor EF-P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein YP_003700347.1 PFAM: peptidase M24; creatinase; KEGG: gur:Gura_1824 peptidase M24 YP_003700350.1 KEGG: rhi:NGR_b14390 transcriptional regulator MntR; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_003700351.1 KEGG: smt:Smal_2940 hypothetical protein YP_003700352.1 KEGG: pol:Bpro_5207 ribonucleotide reductase large subunit; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein YP_003700353.1 KEGG: par:Psyc_1554 rhodanese-like sulfurtransferase protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003700354.1 KEGG: ade:Adeh_1242 glycine dehydrogenase subunit 2; PFAM: Glycine cleavage system P-protein-like YP_003700355.1 KEGG: geo:Geob_1259 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein-like YP_003700356.1 KEGG: afw:Anae109_2522 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_003700360.1 KEGG: spl:Spea_1094 type IV pilus biogenesis protein, putative YP_003700361.1 KEGG: sat:SYN_00459 general secretion pathway protein G YP_003700362.1 PFAM: Type II secretion system F domain; KEGG: maq:Maqu_1350 general secretion pathway protein F YP_003700363.1 PFAM: type II secretion system protein E; KEGG: dat:HRM2_11300 GspE1 YP_003700364.1 KEGG: similar to protein O-D-mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase YP_003700365.1 KEGG: nmu:Nmul_A1629 putative transcriptional regulator YP_003700367.1 PFAM: protein of unknown function DUF185; KEGG: gem:GM21_1418 protein of unknown function DUF185 YP_003700369.1 PFAM: beta-lactamase domain protein; KEGG: dde:Dde_0786 metallo-beta-lactamase family protein YP_003700370.1 KEGG: hpa:HPAG1_0201 putative transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003700372.1 PFAM: protein of unknown function DUF77; KEGG: afw:Anae109_1310 hypothetical protein YP_003700374.1 PFAM: conserved hypothetical protein; KEGG: pmr:PMI1175 hypothetical protein YP_003700375.1 KEGG: glo:Glov_1805 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700376.1 KEGG: ara:Arad_9637 transcriptional regulator protein; TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein YP_003700378.1 PFAM: protein of unknown function DUF1694 YP_003700379.1 PFAM: Rhomboid family protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: dar:Daro_2385 rhomboid-like protein; SMART: Tetratricopeptide repeat YP_003700380.1 KEGG: L-lactate dehydrogenase (predicted); K00016 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_003700381.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: kpe:KPK_1755 putative thiazole biosynthesis adenylyltransferase ThiF/rhodanese domain protein YP_003700382.1 KEGG: MTHFS; 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) ; K01934 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_003700383.1 KEGG: glo:Glov_0049 metal dependent phosphohydrolase YP_003700384.1 KEGG: cju:C8J_0444 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_003700387.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: ppg:PputGB1_2165 penicillin-binding protein 2 YP_003700388.1 KEGG: xca:xccb100_1900 superoxidase dismutase; PFAM: Manganese/iron superoxide dismutase-like YP_003700391.1 KEGG: pca:Pcar_1565 Na+/phosphate symporter; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein YP_003700392.1 PFAM: protein of unknown function DUF1189; KEGG: tau:Tola_2509 hypothetical protein YP_003700393.1 PFAM: protein of unknown function DUF107; KEGG: scl:sce5334 hypothetical protein YP_003700394.1 PFAM: protein of unknown function DUF1002; KEGG: hypothetical protein YP_003700395.1 TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; KEGG: gme:Gmet_1353 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein YP_003700396.1 KEGG: dps:DP0072 hypothetical protein YP_003700397.1 PFAM: ferric-uptake regulator; KEGG: bba:Bd1656 ferric uptake regulator-like protein YP_003700398.1 PFAM: ABC-3 protein; KEGG: tdn:Suden_2063 hypothetical protein YP_003700399.1 PFAM: ABC-3 protein; KEGG: sat:SYN_00956 ABC-type Mn2+/Zn2+ transport systems, permease component YP_003700400.1 KEGG: sat:SYN_00955 ABC-type Mn/Zn transport system ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700401.1 PFAM: Ppx/GppA phosphatase; KEGG: gsu:GSU2559 exopolyphosphatase, putative YP_003700402.1 KEGG: abo:ABO_2460 polyphosphate kinase; PFAM: Polyphosphate kinase YP_003700403.1 PFAM: Lytic transglycosylase catalytic; KEGG: scl:sce0945 soluble lytic murein transglycosylase YP_003700404.1 PFAM: ABC-3 protein; transport system permease protein; KEGG: aeh:Mlg_1043 ABC-3 protein YP_003700405.1 KEGG: tcx:Tcr_2148 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700406.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: gur:Gura_3914 apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel YP_003700407.1 KEGG: bbt:BBta_7020 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003700408.1 PFAM: transcription factor CarD; KEGG: sfu:Sfum_3655 CarD family transcriptional regulator YP_003700409.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: mei:Msip34_2604 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_003700410.1 PFAM: protein of unknown function DUF34; KEGG: gsu:GSU3085 hypothetical protein YP_003700411.1 PFAM: protein of unknown function DUF633; KEGG: ppw:PputW619_2868 hypothetical protein YP_003700412.1 PFAM: cytochrome c class I; KEGG: cco:CCC13826_0726 cytochrome c oxidase, Cbb3-type, subunit III YP_003700413.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pin:Ping_2092 glycerophosphodiester phosphodiesterase YP_003700415.1 KEGG: ank:AnaeK_0758 RNA polymerase, sigma 70 subunit, RpoD family; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; Bacterio-opsin activator HTH domain protein; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein YP_003700416.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; DNA primase, DnaB-helicase binding domain; TOPRIM domain protein; KEGG: gur:Gura_4048 DNA primase; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003700417.1 PFAM: protein of unknown function DUF188; KEGG: tdn:Suden_0449 hypothetical protein YP_003700418.1 PFAM: protein of unknown function DUF299; KEGG: gme:Gmet_3384 hypothetical protein YP_003700419.1 KEGG: hypothetical protein; PFAM: Helix-turn-helix type 11 domain protein; CBS domain containing protein; regulatory protein DeoR; SMART: CBS domain containing protein YP_003700420.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: sat:SYN_01537 glycyl-tRNA synthetase subunit beta YP_003700421.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: pca:Pcar_0598 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit YP_003700422.1 KEGG: mxa:MXAN_3086 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_003700423.1 KEGG: gme:Gmet_2315 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_003700424.1 PFAM: diacylglycerol kinase; KEGG: gbm:Gbem_0999 diacylglycerol kinase YP_003700425.1 PFAM: protein of unknown function UPF0054; KEGG: ppd:Ppro_2034 hypothetical protein YP_003700426.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: pca:Pcar_1232 HD superfamily hydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003700427.1 KEGG: similar to cyclic nucleotide gated channel beta 1 YP_003700428.1 KEGG: dat:HRM2_17760 putative seryl-tRNA synthetase (serine--tRNA ligase) (SerRS) YP_003700429.1 PFAM: protein of unknown function DUF107; peptidase S14 ClpP; KEGG: scl:sce5335 hypothetical protein YP_003700430.1 PFAM: Protein of unknown function YOR215C, mitochondrial; Asn/Gln amidotransferase; KEGG: tcx:Tcr_1808 hypothetical protein YP_003700431.1 KEGG: mxa:MXAN_5201 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_003700432.1 TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: sat:SYN_00797 tRNA 2-methylthioadenosine synthase -like protein; SMART: Elongator protein 3/MiaB/NifB YP_003700433.1 PFAM: protein of unknown function DUF558; KEGG: dat:HRM2_20880 hypothetical protein YP_003700434.1 KEGG: gur:Gura_4290 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; methyltransferase small; Methyltransferase type 11; protein of unknown function Met10; Methyltransferase type 12; putative RNA methylase YP_003700435.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: tbd:Tbd_1539 molecular chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_003700436.1 KEGG: dal:Dalk_3615 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_003700437.1 PFAM: GrpE protein; KEGG: dal:Dalk_3616 GrpE protein YP_003700438.1 KEGG: gme:Gmet_3534 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein YP_003700439.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: ppd:Ppro_1304 putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein YP_003700440.1 KEGG: gsu:GSU1266 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding YP_003700441.1 KEGG: psa:PST_0961 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_003700442.1 KEGG: geo:Geob_2173 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta YP_003700444.1 KEGG: glo:Glov_1759 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein YP_003700445.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; KEGG: cvi:CV_3831 DNA transport competence protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003700446.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; putative RNA methylase; KEGG: ara:Arad_15034 S-adenosylmethionine-dependent methyltransferase protein YP_003700447.1 KEGG: dol:Dole_0092 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_003700448.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003700449.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: shl:Shal_3231 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_003700450.1 PFAM: protein of unknown function UPF0044; KEGG: gme:Gmet_1764 hypothetical protein YP_003700451.1 KEGG: pca:Pcar_2150 shikimate 5-dehydrogenase-like oxidoreductase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_003700452.1 TIGRFAM: ribosome biogenesis GTPase YqeH; KEGG: hypothetical protein; PFAM: GTP-binding protein HSR1-related YP_003700453.1 KEGG: hypothetical protein ; K07015; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Protein of unknown function DUF2010 YP_003700454.1 KEGG: aeh:Mlg_2090 putative monovalent cation/H+ antiporter subunit A; TIGRFAM: monovalent cation/H+ antiporter, subunit 1; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003700455.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: psa:PST_1529 putative monovalent cation/H+ antiporter subunit A YP_003700456.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: maq:Maqu_2857 putative monovalent cation/H+ antiporter subunit C YP_003700457.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tgr:Tgr7_2525 NADH dehydrogenase (quinone) YP_003700458.1 PFAM: cation antiporter; KEGG: mes:Meso_0868 putative monovalent cation/H+ antiporter subunit E YP_003700459.1 PFAM: multiple resistance and pH regulation protein F; KEGG: reh:H16_A1877 putative monovalent cation/H+ antiporter subunit F YP_003700460.1 KEGG: gsu:GSU2338 putative monovalent cation/H+ antiporter subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit YP_003700461.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU1624 glycolate oxidase iron-sulfur subunit, putative YP_003700462.1 PFAM: FAD linked oxidase domain protein; KEGG: gbm:Gbem_2906 FAD linked oxidase domain protein YP_003700463.1 PFAM: sugar diacid recognition domain protein; KEGG: vha:VIBHAR_06864 transcriptional regulator YP_003700464.1 TIGRFAM: phosphatidylserine decarboxylase; KEGG: aci:ACIAD3560 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_003700465.1 KEGG: dma:DMR_15970 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003700466.1 KEGG: sfu:Sfum_0679 polynucleotide adenylyltransferase region; PFAM: CBS domain containing protein; Polynucleotide adenylyltransferase region; phosphoesterase RecJ domain protein; SMART: CBS domain containing protein YP_003700467.1 KEGG: 2-cys peroxiredoxin, chloroplast, putative ; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein YP_003700468.1 KEGG: bph:Bphy_5424 redoxin domain-containing protein YP_003700469.1 KEGG: vha:VIBHAR_05118 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1 YP_003700470.1 TIGRFAM: lipoyltransferase and lipoate-protein ligase; KEGG: msu:MS1058 LplA protein; PFAM: Lipoate protein ligase-like; biotin/lipoate A/B protein ligase YP_003700471.1 KEGG: oan:Oant_3013 2,5-didehydrogluconate reductase; PFAM: aldo/keto reductase YP_003700472.1 TIGRFAM: diaminopimelate epimerase; KEGG: diaminopimelate epimerase family protein ; K01778 diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003700473.1 KEGG: afw:Anae109_2553 ferredoxin-like protein YP_003700474.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: ppu:PP_3319 sensory box protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003700475.1 KEGG: dds:Ddes_1829 hybrid cluster protein; TIGRFAM: hybrid cluster protein; PFAM: Prismane YP_003700476.1 KEGG: tcx:Tcr_2014 chaperone DnaJ-like; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003700477.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rme:Rmet_0591 putative sensor protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003700478.1 KEGG: similar to cyclic nucleotide gated channel beta 1 YP_003700480.1 KEGG: dde:Dde_1644 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003700481.1 KEGG: gsu:GSU2942 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003700482.1 KEGG: reu:Reut_A2748 luciferase-like; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_003700483.1 KEGG: lpn:lpg2034 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003700484.1 PFAM: NUDIX hydrolase; KEGG: bja:bll2562 GDP-mannose mannosyl hydrolase YP_003700485.1 KEGG: afw:Anae109_3061 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein YP_003700486.1 PFAM: beta-lactamase domain protein; KEGG: hha:Hhal_1314 beta-lactamase domain-containing protein YP_003700488.1 TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; KEGG: dal:Dalk_4702 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B YP_003700489.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dma:DMR_45540 hypothetical membrane protein YP_003700491.1 KEGG: mms:mma_1168 hypothetical protein YP_003700492.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sfu:Sfum_1058 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003700493.1 KEGG: gur:Gura_3670 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003700494.1 Contains selenocysteine; PFAM: HesB/YadR/YfhF-family protein; KEGG: gsu:GSU1207 HesB/YadR/YfhF family protein, selenocysteine-containing YP_003700495.1 PFAM: periplasmic solute binding protein; KEGG: yen:YE1900 periplasmic-binding protein YP_003700496.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: swp:swp_1880 peptidase S9, prolyl oligopeptidase active site region:WD40-like beta propeller YP_003700497.1 PFAM: phosphoryl transfer system HPr; KEGG: lpp:lpp0540 hypothetical protein YP_003700498.1 PFAM: NUDIX hydrolase; KEGG: abu:Abu_1635 phosphohydrolase (MutT/NUDIX family protein) YP_003700499.1 KEGG: pin:Ping_0920 methylthioadenosine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_003700500.1 PFAM: protein of unknown function DUF1510; KEGG: TSPYL2; TSPY-like 2 ; K11285 TSPY-like 2 YP_003700501.1 KEGG: transcription elongation factor; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein YP_003700502.1 TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: similar to uridine-cytidine kinase 2; SMART: AAA ATPase YP_003700503.1 PFAM: peptidase U32; KEGG: geo:Geob_1554 peptidase U32 YP_003700504.1 PFAM: peptidase U32; KEGG: gme:Gmet_0888 peptidase U32 YP_003700505.1 PFAM: O-methyltransferase family 3; KEGG: ecn:Ecaj_0320 O-methyltransferase family protein YP_003700506.1 PFAM: aminodeoxychorismate lyase; KEGG: dat:HRM2_33010 putative aminodeoxychorismate lyase YP_003700507.1 PFAM: protein of unknown function DUF1292 YP_003700508.1 KEGG: mxa:MXAN_5823 hypothetical protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_003700509.1 PFAM: protein of unknown function DUF965 YP_003700510.1 TIGRFAM: alanyl-tRNA synthetase; KEGG: dal:Dalk_2944 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD YP_003700511.1 KEGG: dde:Dde_2725 helicase RecD/TraA; TIGRFAM: helicase, RecD/TraA family YP_003700512.1 KEGG: cbg:CbuG_1449 tetratricopeptide repeat family protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide repeat YP_003700513.1 KEGG: maq:Maqu_1762 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like YP_003700514.1 KEGG: gur:Gura_1493 aminotransferase, class V; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003700515.1 KEGG: sat:SYN_03008 rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003700516.1 PFAM: protein of unknown function DUF161; KEGG: smt:Smal_0798 protein of unknown function DUF161 YP_003700517.1 KEGG: pca:Pcar_1103 fused recombination factor protein RarA/unknown domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003700518.1 PFAM: DoxX family protein; KEGG: bgl:bglu_2g01230 hypothetical protein YP_003700519.1 PFAM: protein of unknown function DUF162; KEGG: hsm:HSM_1122 hypothetical protein YP_003700520.1 KEGG: ppr:PBPRA2359 putative electron transport protein YkgF; TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162 YP_003700521.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dat:HRM2_14000 cysteine-rich domain family protein (CCG family protein) YP_003700522.1 PFAM: L-lactate permease; KEGG: shw:Sputw3181_2834 L-lactate permease YP_003700523.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gsu:GSU3288 ThiF family protein YP_003700524.1 KEGG: dal:Dalk_2756 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_003700525.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: pca:Pcar_1041 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003700526.1 KEGG: ade:Adeh_0179 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_003700527.1 KEGG: pha:PSHAa1200 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003700528.1 KEGG: mxa:MXAN_4688 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; Single-stranded-DNA-specific exonuclease RecJ-like; phosphoesterase DHHA1 YP_003700529.1 KEGG: cbc:CbuK_1009 protein translocase subunit; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003700530.1 KEGG: mes:Meso_1796 bifunctional preprotein translocase subunit SecD/SecF; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003700532.1 PFAM: protein of unknown function DUF368; KEGG: csa:Csal_2633 hypothetical protein YP_003700533.1 KEGG: dat:HRM2_27220 putative preprotein translocase, subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_003700534.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: geo:Geob_3451 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_003700535.1 KEGG: glo:Glov_2012 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_003700536.1 KEGG: gem:GM21_0889 hypothetical protein YP_003700537.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; KEGG: gsu:GSU1077 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_003700538.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: msu:MS0712 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003700539.1 KEGG: afw:Anae109_2039 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein YP_003700540.1 PFAM: amino acid-binding ACT domain protein YP_003700541.1 KEGG: hypothetical protein; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein YP_003700543.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: gbm:Gbem_0545 arginase/agmatinase/formiminoglutamase YP_003700544.1 TIGRFAM: protoporphyrinogen oxidase; KEGG: gsu:GSU0012 protoporphyrinogen oxidase; PFAM: amine oxidase YP_003700545.1 TIGRFAM: ferrochelatase; KEGG: scl:sce1682 ferrochelatase; PFAM: ferrochelatase YP_003700546.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: scl:sce8628 putative uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_003700547.1 KEGG: dol:Dole_0135 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003700548.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ppd:Ppro_2005 cytochrome c biogenesis protein, transmembrane region YP_003700549.1 TIGRFAM: amidohydrolase; KEGG: dvm:DvMF_1012 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003700550.1 PFAM: ABC transporter EcsB; KEGG: similar to AGAP012156-PA YP_003700551.1 KEGG: mxa:MXAN_4750 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700552.1 PFAM: histidine triad (HIT) protein; KEGG: dvl:Dvul_2539 histidine triad (HIT) protein YP_003700553.1 TIGRFAM: phosphoserine aminotransferase; KEGG: dps:DP1933 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_003700554.1 KEGG: bmj:BMULJ_03405 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003700556.1 PFAM: Protein of unknown function DUF2140 YP_003700558.1 KEGG: gur:Gura_2929 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region YP_003700559.1 KEGG: abo:ABO_0713 sensor histidine kinase RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003700560.1 KEGG: cti:RALTA_B1458 response regulator in two-component regulatory system, regulation of heavy metal resistance operon czcCBA; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003700561.1 PFAM: SMC domain protein; KEGG: dal:Dalk_3815 conserved hypothetical protein-like protein YP_003700562.1 PFAM: metallophosphoesterase; KEGG: pna:Pnap_1662 metallophosphoesterase YP_003700564.1 PFAM: thioesterase superfamily protein; KEGG: bbr:BB4679 hypothetical protein YP_003700565.1 PFAM: protein of unknown function DUF964; KEGG: hypothetical protein YP_003700566.1 PFAM: protein of unknown function DUF445; KEGG: pca:Pcar_0273 hypothetical protein YP_003700568.1 KEGG: tau:Tola_2578 transcriptional regulator, CdaR YP_003700569.1 KEGG: ecr:ECIAI1_1343 putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase YP_003700570.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: shw:Sputw3181_2951 cytochrome c biogenesis protein, transmembrane region YP_003700571.1 KEGG: bpt:Bpet0022 hypothetical protein YP_003700572.1 KEGG: pmy:Pmen_1563 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003700573.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: afw:Anae109_0981 cytochrome bd ubiquinol oxidase subunit I YP_003700574.1 KEGG: scl:sce2438 terminal oxidase subunit II YP_003700576.1 KEGG: spl:Spea_4188 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700578.1 KEGG: pfl:PFL_4934 PTS system, trehalose-specific IIBC component; TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_003700579.1 PFAM: Indigoidine synthase A family protein; KEGG: aha:AHA_3405 indigoidine synthase A like protein YP_003700580.1 PFAM: PfkB domain protein; Helix-turn-helix type 11 domain protein; KEGG: rle:pRL120174 PfkB family kinase YP_003700581.1 PFAM: ABC-1 domain protein; RIO-like kinase; KEGG: Os09g0250700; hypothetical protein ; K08869 aarF domain-containing kinase YP_003700582.1 KEGG: sfu:Sfum_0244 hypothetical protein YP_003700583.1 KEGG: predicted gene, 100043744 YP_003700585.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: scl:sce5570 hypothetical protein YP_003700586.1 KEGG: hypothetical protein YP_003700587.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: dal:Dalk_1894 methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003700588.1 PFAM: major facilitator superfamily MFS_1; Protein of unknown function DUF895, eukaryotic; KEGG: ank:AnaeK_0140 major facilitator superfamily MFS_1 YP_003700589.1 KEGG: hypothetical protein; TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_003700590.1 PFAM: aldo/keto reductase; KEGG: scl:sce5048 oxidoreductase YP_003700593.1 PFAM: protein of unknown function DUF152; KEGG: gem:GM21_3460 protein of unknown function DUF152 YP_003700594.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: sde:Sde_3057 branched chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003700595.1 KEGG: sfu:Sfum_3023 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region YP_003700596.1 KEGG: sfu:Sfum_3022 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003700597.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: scl:sce3732 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003700598.1 KEGG: gsu:GSU1906 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003700599.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: dvm:DvMF_1794 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003700600.1 KEGG: ebr:ECB_00074 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_003700601.1 KEGG: rpf:Rpic12D_1820 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_003700602.1 KEGG: dds:Ddes_1465 nitrogen regulatory protein P-II (GlnB, GlnK) YP_003700603.1 PFAM: protein of unknown function DUF1538; KEGG: sfr:Sfri_2271 hypothetical protein YP_003700604.1 PFAM: protein of unknown function DUF1538; KEGG: sun:SUN_1865 hypothetical protein YP_003700605.1 KEGG: mxa:MXAN_5992 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003700606.1 PFAM: Sporulation stage 0, Spo0E-like regulatory phosphatase YP_003700607.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: scl:sce4837 putative phosphoglucomutase/phosphomannomutase YP_003700608.1 PFAM: FAD dependent oxidoreductase; KEGG: mxa:MXAN_7329 glycerol-3-phosphate dehydrogenase YP_003700609.1 KEGG: xca:xccb100_0384 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_003700610.1 KEGG: fph:Fphi_1035 major intrinsic protein family permease; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_003700611.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: ect:ECIAI39_2950 putative anti-terminator regulatory protein YP_003700612.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N-acetyltransferase; KEGG: hha:Hhal_1970 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003700613.1 PFAM: CheC domain protein; KEGG: sat:SYN_00961 putative inhibitor of MCP methylation YP_003700614.1 PFAM: Protein of unknown function DUF2225; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat YP_003700615.1 PFAM: inner-membrane translocator; KEGG: scl:sce7756 uncharacterized ABC-type transport system,permease component YP_003700616.1 PFAM: inner-membrane translocator; KEGG: scl:sce7757 ABC transporter permease YP_003700617.1 KEGG: scl:sce7755 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700618.1 PFAM: basic membrane lipoprotein; KEGG: mxa:MXAN_5711 Bmp family lipoprotein YP_003700619.1 PFAM: Ethanolamine utilisation protein EutH; KEGG: maq:Maqu_1238 ethanolamine utilisation protein, EutH YP_003700620.1 KEGG: dat:HRM2_40650 SfsA; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_003700621.1 PFAM: protein of unknown function DUF1028; Putative peptidoglycan binding; KEGG: afw:Anae109_1192 hypothetical protein YP_003700623.1 TIGRFAM: signal peptidase I; KEGG: hch:HCH_01798 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_003700624.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: sat:SYN_00304 multimodular transpeptidase-transglycosylase YP_003700626.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: afr:AFE_2662 antibiotic biosynthesis monooxygenase family protein YP_003700627.1 KEGG: glo:Glov_2088 tRNA/rRNA methyltransferase (SpoU); TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_003700629.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; KEGG: abc:ACICU_00656 methylated DNA-protein cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_003700630.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: oan:Oant_1337 hypothetical protein; SMART: PBS lyase HEAT domain protein repeat-containing protein YP_003700631.1 PFAM: protein of unknown function DUF302; KEGG: tcx:Tcr_2069 hypothetical protein YP_003700632.1 PFAM: protein of unknown function DUF28; KEGG: ebr:ECB_01895 hypothetical protein YP_003700634.1 PFAM: alpha/beta hydrolase fold; KEGG: vha:VIBHAR_01577 hypothetical protein YP_003700635.1 KEGG: esa:ESA_02618 DNA-binding transcriptional repressor MngR; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003700636.1 PFAM: glycoside hydrolase family 4; KEGG: kpn:KPN_04085 glycoside hydrolase family protein 4 YP_003700637.1 KEGG: stm:STM2758 putative phosphotransferase system IIC component; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_003700638.1 TIGRFAM: redox-active disulfide protein 2; KEGG: gur:Gura_0436 redox-active disulfide protein 2 YP_003700639.1 PFAM: permease; KEGG: dat:HRM2_48210 putative permease YP_003700640.1 KEGG: dma:DMR_20150 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003700641.1 KEGG: gem:GM21_0639 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003700642.1 KEGG: sfu:Sfum_3035 membrane-bound lytic murein transglycosylase B-like YP_003700643.1 KEGG: hypothetical protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase YP_003700644.1 KEGG: csa:Csal_3298 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_003700645.1 KEGG: dde:Dde_0167 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003700646.1 KEGG: shw:Sputw3181_0916 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700647.1 PFAM: GCN5-related N-acetyltransferase YP_003700648.1 KEGG: hch:HCH_00084 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_003700650.1 KEGG: vfm:VFMJ11_0813 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003700651.1 KEGG: hpa:HPAG1_0201 putative transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003700652.1 PFAM: RelA/SpoT domain protein; KEGG: aha:AHA_3012 region found in RelA / SpoT proteins YP_003700653.1 PFAM: protein of unknown function DUF202; KEGG: cko:CKO_00024 hypothetical protein YP_003700654.1 PFAM: protein of unknown function DUF897; KEGG: psa:PST_0188 sodium bicarbonate cotransporter YP_003700655.1 PFAM: Protein of unknown function DUF2294 YP_003700656.1 PFAM: FAD dependent oxidoreductase; KEGG: glycerol-3-phosphate dehydrogenase YP_003700658.1 KEGG: sbc:SbBS512_E4605 phosphonate ABC transporter, permease protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003700659.1 KEGG: hypothetical protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003700660.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: maq:Maqu_3258 phosphonate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_003700661.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: maq:Maqu_3992 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_003700662.1 KEGG: hpy:HP1287 transcriptional regulator (TenA); PFAM: TENA/THI-4 domain protein YP_003700663.1 KEGG: bja:bll3318 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700664.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1910 ABC transporter, permease protein YP_003700665.1 PFAM: NMT1/THI5 like domain protein; KEGG: dat:HRM2_04300 ABC-type transporter, substrate-binding protein YP_003700666.1 KEGG: ppu:PP_2995 DNA topology modulation kinase FlaR, putative YP_003700667.1 KEGG: lpf:lpl0258 hypothetical protein; TIGRFAM: degV family protein; PFAM: DegV family protein; Dak phosphatase YP_003700668.1 PFAM: protein of unknown function DUF1295; KEGG: ppd:Ppro_0131 hypothetical protein YP_003700669.1 PFAM: Polysulphide reductase NrfD; KEGG: aeh:Mlg_0214 polysulphide reductase, NrfD YP_003700670.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: glo:Glov_1147 cytoplasmic chaperone TorD family protein YP_003700671.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0765 molybdopterin oxidoreductase YP_003700672.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: wsu:WS0764 molybdopterin oxidoreductase, molybdopterin binding subunit YP_003700673.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: gur:Gura_0350 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_003700674.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: afw:Anae109_1809 histidine kinase; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein YP_003700675.1 KEGG: dat:HRM2_24220 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003700676.1 PFAM: Bile acid:sodium symporter; KEGG: avn:Avin_18500 sodium:bile acid symporter family protein YP_003700677.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bph:Bphy_6823 short-chain dehydrogenase/reductase SDR YP_003700678.1 KEGG: gur:Gura_0724 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003700679.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: tgr:Tgr7_2518 major facilitator superfamily MFS_1 YP_003700680.1 KEGG: hypothetical protein YP_003700682.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_1785 3-ketoacyl-(acyl-carrier-protein) reductase YP_003700683.1 PFAM: acriflavin resistance protein; KEGG: tgr:Tgr7_1732 acriflavin resistance protein YP_003700685.1 PFAM: Amidase; KEGG: ilo:IL1971 amidase YP_003700686.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mmw:Mmwyl1_3044 LysR family transcriptional regulator YP_003700687.1 PFAM: homocysteine S-methyltransferase; KEGG: csa:Csal_0065 homocysteine S-methyltransferase YP_003700688.1 KEGG: gsu:GSU0400 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_003700690.1 KEGG: nam:NAMH_1441 hypothetical protein YP_003700691.1 KEGG: gur:Gura_2311 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc YP_003700692.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: scl:sce4177 phosphoenolpyruvate synthase YP_003700693.1 PFAM: regulatory protein TetR; KEGG: dol:Dole_0557 TetR family transcriptional regulator YP_003700695.1 KEGG: pin:Ping_3063 transposase, IS605 OrfB family protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003700698.1 PFAM: SpoVT/AbrB domain protein; KEGG: kpn:KPN_pKPN7p10263 hypothetical protein YP_003700699.1 PFAM: PemK family protein; KEGG: kpn:KPN_pKPN7p10264 hypothetical protein YP_003700700.1 KEGG: ret:RHE_CH03713 organic-radical-activating protein; TIGRFAM: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; PFAM: Radical SAM domain protein YP_003700701.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: apa:APP7_1154 putative 6-pyruvoyl tetrahydrobiopterin synthase YP_003700702.1 KEGG: vpa:VP1638 queuosine biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; PP-loop domain protein YP_003700703.1 KEGG: pin:Ping_3063 transposase, IS605 OrfB family protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003700705.1 PFAM: extracellular solute-binding protein family 1; KEGG: rhi:NGR234_113 Y4fP YP_003700706.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rhi:NGR234_111 Y4fN YP_003700707.1 KEGG: pag:PLES_04651 hypothetical protein YP_003700708.1 KEGG: bmt:BSUIS_B0801 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700709.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vsp:VS_II0542 putative acetyltransferase YP_003700710.1 PFAM: DNA alkylation repair enzyme; KEGG: dar:Daro_2742 DNA-7-methylguanine glycosylase YP_003700711.1 KEGG: ppr:PBPRA2003 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_003700712.1 KEGG: ppr:PBPRA2003 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_003700713.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; Cache domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: geo:Geob_2297 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein YP_003700714.1 KEGG: glo:Glov_0589 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003700715.1 KEGG: tau:Tola_0021 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003700716.1 KEGG: rme:Rmet_1792 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700717.1 PFAM: protein of unknown function DUF214; KEGG: gem:GM21_2026 protein of unknown function DUF214 YP_003700718.1 PFAM: conserved hypothetical protein YP_003700720.1 PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003700721.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3633 transposase IS3/IS911 family protein YP_003700722.1 KEGG: pcr:Pcryo_0932 HNH nuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_003700723.1 PFAM: histidine triad (HIT) protein; KEGG: sfu:Sfum_1438 type III restriction enzyme, res subunit YP_003700724.1 KEGG: csa:Csal_1077 hypothetical protein; PFAM: Protein of unknown function DUF2075; type III restriction protein res subunit; SMART: AAA ATPase YP_003700725.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: neu:NE2190 integron/retron-type RNA-directed DNA polymerase YP_003700727.1 KEGG: dat:HRM2_14680 HsdR1 YP_003700731.1 PFAM: polysaccharide deacetylase; KEGG: wbm:Wbm0074 xylanase/chitin deacetylase YP_003700732.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slo:Shew_3023 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003700734.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: hha:Hhal_1446 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein YP_003700736.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA0784 short-chain dehydrogenase/reductase SDR YP_003700737.1 PFAM: regulatory protein TetR; KEGG: prw:PsycPRwf_1467 TetR family transcriptional regulator YP_003700738.1 PFAM: NmrA family protein; KEGG: hypothetical protein YP_003700739.1 KEGG: similar to coiled-coil and C2 domain containing 2A YP_003700742.1 KEGG: fph:Fphi_1562 ferric iron binding protein, ferritin-like protein; PFAM: Ferritin Dps family protein YP_003700743.1 KEGG: pin:Ping_3063 transposase, IS605 OrfB family protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003700745.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: similar to stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) ; K09553 stress-induced-phosphoprotein 1 YP_003700746.1 PFAM: peptidase M42 family protein; peptidase M20; KEGG: vsa:VSAL_II0101 peptidase YP_003700747.1 PFAM: Uncharacterised conserved protein UCP037246 YP_003700748.1 KEGG: dol:Dole_1254 hypothetical protein YP_003700750.1 KEGG: afw:Anae109_0681 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700751.1 KEGG: cps:CPS_4735 copper ABC transporter, permease protein YP_003700752.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: dma:DMR_37130 ThiF family protein YP_003700753.1 PFAM: thiazole biosynthesis family protein; KEGG: ppd:Ppro_3475 thiazole synthase YP_003700754.1 KEGG: dar:Daro_3862 ThiS, thiamine-biosynthesis; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_003700755.1 PFAM: FAD dependent oxidoreductase; KEGG: scl:sce8534 glycine oxidase YP_003700756.1 PFAM: thiamine monophosphate synthase; KEGG: gbm:Gbem_3462 phosphomethylpyrimidine kinase YP_003700757.1 PFAM: Domain of unknown function DUF1801 YP_003700758.1 PFAM: Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: maq:Maqu_2507 short chain dehydrogenase YP_003700759.1 KEGG: bja:bll5737 putative acyl-CoA dehydrogenase YP_003700761.1 PFAM: helix-turn-helix HxlR type; KEGG: pag:PLES_23911 putative transcriptional regulator YP_003700762.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_1734 binding-protein-dependent transport systems inner membrane component YP_003700763.1 KEGG: geo:Geob_0361 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein YP_003700764.1 KEGG: gme:Gmet_1899 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700765.1 KEGG: mxa:MXAN_5120 transcriptional activator TipA; PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR YP_003700766.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_C0635 putative short-chain dehydrogenase/reductase YP_003700767.1 PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU0752 transporter, putative YP_003700768.1 KEGG: rlg:Rleg_2681 transcriptional regulator, ArsR family YP_003700771.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; KEGG: tau:Tola_1653 oxidoreductase domain protein YP_003700772.1 KEGG: pha:PSHAb0292 putative HNH endonuclease YP_003700774.1 PFAM: IS66 Orf2 family protein; KEGG: sbn:Sbal195_0639 IS66 Orf2 family protein YP_003700775.1 PFAM: transposase IS66; KEGG: reu:Reut_C6337 transposase IS66 YP_003700778.1 PFAM: ferric-uptake regulator; KEGG: sfu:Sfum_1722 ferric uptake regulator family protein YP_003700779.1 PFAM: protein of unknown function DUF970 YP_003700780.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: aeh:Mlg_0876 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_003700783.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sun:SUN_0313 peroxiredoxin family protein YP_003700784.1 KEGG: tgr:Tgr7_2421 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_003700785.1 KEGG: gme:Gmet_0147 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II YP_003700786.1 PFAM: protein of unknown function DUF939; KEGG: dma:DMR_35100 hypothetical membrane protein YP_003700788.1 KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003700789.1 PFAM: protein of unknown function DUF402 YP_003700791.1 KEGG: gsu:GSU1456 hypothetical protein YP_003700792.1 PFAM: glycosyl transferase family 2; chitin synthase; KEGG: mlo:mlr6694 hypothetical protein YP_003700793.1 PFAM: HEAT domain containing protein; KEGG: mlo:mlr6693 hypothetical protein YP_003700794.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pmy:Pmen_0723 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver YP_003700795.1 PFAM: Chromate transporter; KEGG: csa:Csal_1741 chromate transporter YP_003700796.1 PFAM: Chromate transporter; KEGG: csa:Csal_1742 chromate transporter YP_003700797.1 KEGG: pfs:PFLU4096 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_003700798.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: ank:AnaeK_2852 short-chain dehydrogenase/reductase SDR YP_003700799.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; KEGG: pla:Plav_0701 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein YP_003700800.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: mxa:MXAN_5486 putative hydrolase YP_003700802.1 PFAM: Protein of unknown function DUF1811 YP_003700803.1 PFAM: regulatory protein RecX; KEGG: dat:HRM2_18750 RecX YP_003700804.1 PFAM: domain of unknown function DUF1731; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein, conserved ; K07071 YP_003700806.1 TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: cvi:CV_3302 transcriptional repressor of the trehalose operon; SMART: regulatory protein GntR HTH YP_003700807.1 TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: aha:AHA_3823 alpha,alpha-phosphotrehalase; SMART: alpha amylase catalytic sub domain YP_003700808.1 PFAM: Auxin Efflux Carrier; KEGG: tau:Tola_2495 auxin efflux carrier YP_003700809.1 KEGG: hypothetical protein YP_003700810.1 KEGG: similar to tumor suppressor TSBF1 YP_003700812.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfu:Sfum_3218 glutaredoxin YP_003700816.1 KEGG: hypothetical protein YP_003700818.1 KEGG: aha:AHA_3694 23S rRNA (uracil-5-)-methyltransferase RumA; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase YP_003700819.1 PFAM: Phosphoglycerate mutase; KEGG: Putative protein of unknown function with some similarity to GPM1/YKL152C, a phosphoglycerate mutase; YOR283W is not an essential gene YP_003700820.1 KEGG: latent nuclear antigen YP_003700822.1 PFAM: YfkB-like domain protein; Radical SAM domain protein; KEGG: sat:SYN_02266 radical SAM superfamily protein YP_003700823.1 KEGG: rme:Rmet_3962 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003700824.1 PFAM: major facilitator superfamily MFS_1; KEGG: atc:AGR_C_2391 hypothetical protein YP_003700827.1 KEGG: similar to centrosome protein cep290 YP_003700828.1 KEGG: hypothetical protein YP_003700829.1 PFAM: beta-lactamase domain protein; KEGG: afw:Anae109_0051 beta-lactamase domain-containing protein YP_003700831.1 PFAM: Sterol-binding domain protein; KEGG: ank:AnaeK_1526 sterol-binding domain protein YP_003700832.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: gur:Gura_4396 1-acyl-sn-glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003700833.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nis:NIS_1814 ferredoxin-like protein YP_003700834.1 PFAM: acylphosphatase; KEGG: cbg:CbuG_2003 acylphosphatase YP_003700836.1 KEGG: dar:Daro_3894 deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_003700837.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dds:Ddes_1743 GCN5-related N-acetyltransferase YP_003700838.1 PFAM: Aldehyde Dehydrogenase; KEGG: sat:SYN_00265 NAD-dependent aldehyde dehydrogenase YP_003700839.1 KEGG: tgr:Tgr7_3078 hypothetical protein YP_003700840.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: hypothetical protein YP_003700841.1 PFAM: carbonic anhydrase; KEGG: pat:Patl_4260 carbonate dehydratase YP_003700842.1 PFAM: SirA family protein; KEGG: har:HEAR0618 hypothetical protein YP_003700843.1 KEGG: tcx:Tcr_0916 rhodanese-like protein; PFAM: SirA family protein; Rhodanese domain protein; SMART: Rhodanese domain protein YP_003700844.1 KEGG: nis:NIS_1241 thioredoxin YP_003700845.1 PFAM: glycosyl transferase family 2; KEGG: gem:GM21_1665 glycosyl transferase family 2 YP_003700846.1 KEGG: abb:ABBFA_000876 hypothetical protein; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118 YP_003700847.1 PFAM: Uncharacterised conserved protein UCP020408; KEGG: wsu:WS2044 hypothetical protein YP_003700849.1 KEGG: hypothetical protein YP_003700851.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bja:blr1238 hypothetical protein YP_003700852.1 PFAM: phospholipase/Carboxylesterase; KEGG: bja:bll3246 hypothetical protein YP_003700853.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: gsu:GSU0898 ATP-dependent DNA helicase RecQ; SMART: helicase domain protein; HRDC domain protein; DEAD-like helicase YP_003700854.1 KEGG: oan:Oant_1642 export-related chaperone CsaA; TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein YP_003700855.1 KEGG: ade:Adeh_1756 anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter; C4-dicarboxylate anaerobic carrier-like YP_003700856.1 KEGG: gur:Gura_0724 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003700857.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: pin:Ping_0949 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein YP_003700858.1 TIGRFAM: adenine deaminase; KEGG: dvl:Dvul_2495 adenine deaminase; PFAM: amidohydrolase YP_003700859.1 KEGG: scl:sce5645 carbohydrate ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003700860.1 KEGG: scl:sce5644 carbohydrate ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003700861.1 TIGRFAM: glycerate kinase; KEGG: ent:Ent638_3566 glycerate kinase I; PFAM: glycerate kinase YP_003700862.1 KEGG: tau:Tola_1232 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003700863.1 KEGG: pmr:PMI3342 chloramphenicol-sensitive protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_003700864.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hch:HCH_00126 short-chain alcohol dehydrogenase-like protein YP_003700865.1 PFAM: GCN5-related N-acetyltransferase; KEGG: saz:Sama_0404 acetyltransferase YP_003700866.1 KEGG: dat:HRM2_47940 putative transport protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein YP_003700867.1 PFAM: GCN5-related N-acetyltransferase; KEGG: smd:Smed_3521 GCN5-related N-acetyltransferase YP_003700868.1 PFAM: Protein of unknown function DUF2196; KEGG: dps:DP0934 hypothetical protein YP_003700869.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; KEGG: pap:PSPA7_4198 putative sensor protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region; PAS domain containing protein YP_003700870.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll3089 hypothetical protein YP_003700871.1 KEGG: vfm:VFMJ11_1675 HTH-type transcriptional repressor PurR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003700872.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: ebr:ECB_01293 predicted hydrolase YP_003700873.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein ; K00059 3-oxoacyl- YP_003700874.1 PFAM: transport system permease protein; KEGG: asu:Asuc_1823 transport system permease protein YP_003700875.1 PFAM: transport system permease protein; KEGG: msu:MS0793 BtuC protein YP_003700876.1 KEGG: msu:MS0794 FepC protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700877.1 PFAM: periplasmic binding protein; KEGG: bmc:BAbS19_II05320 periplasmic binding protein YP_003700878.1 KEGG: bxe:Bxe_A0905 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region YP_003700879.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_3628 hypothetical protein YP_003700880.1 KEGG: csa:Csal_0799 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_003700881.1 KEGG: scl:sce9296 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_003700882.1 TIGRFAM: xylose isomerase; KEGG: Os07g0669100; hypothetical protein ; K01805 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_003700883.1 PFAM: ROK family protein; KEGG: scl:sce7667 ROK family transcriptional regulator YP_003700884.1 KEGG: pha:PSHAb0292 putative HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_003700885.1 KEGG: spt:SPA3955 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003700886.1 KEGG: hypothetical protein; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein YP_003700887.1 KEGG: avn:Avin_41160 response regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain YP_003700888.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003700889.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component YP_003700890.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4515 binding-protein-dependent transport systems inner membrane component YP_003700891.1 KEGG: csa:Csal_1143 alpha-L-arabinofuranosidase; PFAM: glycoside hydrolase family 43 YP_003700892.1 PFAM: protein of unknown function DUF624; KEGG: hypothetical protein YP_003700893.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cti:RALTA_A1460 acyl-CoA synthetase YP_003700894.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_C0306 TetR family transcriptional regulator YP_003700895.1 KEGG: gem:GM21_3590 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_003700897.1 KEGG: smt:Smal_2895 hypothetical protein YP_003700898.1 PFAM: protein of unknown function DUF1328; KEGG: sbm:Shew185_1413 hypothetical protein YP_003700899.1 PFAM: protein of unknown function DUF1328; KEGG: amc:MADE_01267 hypothetical protein YP_003700900.1 PFAM: TrkA-C domain protein; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: tgr:Tgr7_3239 TrkA-C domain protein YP_003700901.1 PFAM: Silent information regulator protein Sir2; KEGG: aeh:Mlg_2040 silent information regulator protein Sir2 YP_003700902.1 PFAM: 3D domain protein; KEGG: cvi:CV_3353 hypothetical protein YP_003700903.1 PFAM: AIG2 family protein; KEGG: sun:SUN_2428 hypothetical protein YP_003700904.1 KEGG: geo:Geob_2049 hypothetical protein; PFAM: Protein of unknown function DUF2087; regulatory protein LuxR; SMART: regulatory protein LuxR YP_003700905.1 KEGG: azo:azo2882 putative transcription regulator, Nnr-type; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003700906.1 KEGG: nam:NAMH_0490 hypothetical protein YP_003700907.1 KEGG: dat:HRM2_41100 PorB3; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding YP_003700908.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; KEGG: dde:Dde_1792 pyruvate ferredoxin oxidoreductase, alpha subunit YP_003700909.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0930 permease YP_003700911.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pca:Pcar_2449 GGDEF domain-containing protein; SMART: GGDEF domain containing protein YP_003700912.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hypothetical protein YP_003700913.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cvi:CV_2788 isomerase YP_003700914.1 KEGG: saz:Sama_2202 phopholipase D-family protein; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_003700915.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: gme:Gmet_3085 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003700916.1 KEGG: bbt:BBta_4739 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003700918.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: gsu:GSU1055 hypothetical protein YP_003700920.1 KEGG: mca:MCA1742 rhodanese-like domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003700921.1 KEGG: pfl:PFL_0553 fused rhodanese domain-containing protein/phosphatidylserine decarboxylase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003700922.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: psa:PST_2283 outer membrane protein, putative YP_003700923.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gsu:GSU3390 hypothetical protein YP_003700924.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vcj:VCD_001354 D-3-phosphoglycerate dehydrogenase YP_003700925.1 PFAM: ABC-1 domain protein; KEGG: mxa:MXAN_3899 hypothetical protein YP_003700928.1 PFAM: protein of unknown function DUF985; KEGG: ppr:PBPRA0656 hypothetical protein YP_003700929.1 KEGG: pla:Plav_1074 luciferase family protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_003700930.1 KEGG: GF21513 gene product from transcript GF21513-RA YP_003700933.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rlg:Rleg_3068 alcohol dehydrogenase zinc-binding domain protein YP_003700934.1 PFAM: transposase IS4 family protein; KEGG: sat:SYN_00790 transposase YP_003700935.1 KEGG: aeh:Mlg_1110 hypothetical protein YP_003700936.1 PFAM: SurA domain; KEGG: maq:Maqu_1836 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003700937.1 KEGG: hypothetical LOC575237 YP_003700938.1 KEGG: vcj:VCD_000492 cobalt-zinc-cadmium resistance protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003700939.1 PFAM: regulatory protein TetR; KEGG: dps:DP1699 transcription regulator YP_003700940.1 PFAM: conserved hypothetical protein; KEGG: bgl:bglu_1g26170 predicted Rossmann fold nucleotide-binding protein YP_003700941.1 KEGG: tgr:Tgr7_0187 TonB-dependent receptor YP_003700942.1 PFAM: Ion transport protein; KEGG: aeh:Mlg_0322 ion transport protein YP_003700943.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dds:Ddes_1618 CMP/dCMP deaminase zinc-binding YP_003700945.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: afw:Anae109_1427 NAD-dependent epimerase/dehydratase YP_003700946.1 KEGG: aeh:Mlg_2123 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region YP_003700947.1 PFAM: protein of unknown function UPF0061; KEGG: pca:Pcar_0297 hypothetical protein YP_003700948.1 PFAM: DoxX family protein; KEGG: bgl:bglu_2g01230 hypothetical protein YP_003700950.1 KEGG: nexilin (F actin binding protein) YP_003700951.1 PFAM: regulatory protein TetR; KEGG: gsu:GSU2741 TetR family transcriptional regulator YP_003700952.1 PFAM: periplasmic binding protein; KEGG: dol:Dole_2060 periplasmic binding protein YP_003700953.1 PFAM: transport system permease protein; KEGG: mlo:mll1150 permease protein of ABC transporter YP_003700954.1 KEGG: sat:SYN_01426 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: protein of unknown function DUF105; ABC transporter related; SMART: AAA ATPase YP_003700955.1 PFAM: extracellular solute-binding protein family 1; KEGG: vha:VIBHAR_06396 ABC-type sugar transport system periplasmic protein YP_003700956.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_460 lactose transport system permease protein lacG YP_003700957.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_4072 sugar ABC transporter YP_003700958.1 KEGG: reh:H16_A2327 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_003700959.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: gur:Gura_1271 NAD(P)H dehydrogenase (quinone) YP_003700960.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: swd:Swoo_3818 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003700961.1 PFAM: Phosphoglycerate mutase; KEGG: ecc:c0729 alpha-ribazole-5'-phosphate phosphatase YP_003700964.1 KEGG: tgr:Tgr7_1963 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003700965.1 KEGG: afe:Lferr_0209 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003700966.1 KEGG: pau:PA14_49620 phosphoserine phosphatase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_003700967.1 PFAM: peptidase M20; KEGG: sme:SM_b20697 putative peptidase, arginine utilization protein RocB YP_003700969.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; PAS fold domain protein; PAS fold-4 domain protein; KEGG: tgr:Tgr7_1990 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: GGDEF domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region; PAS domain containing protein YP_003700970.1 KEGG: bav:BAV1037 membrane-associated phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003700971.1 KEGG: spc:Sputcn32_0254 hypothetical protein; Contains selenocysteine YP_003700972.1 PFAM: Luciferase-like, subgroup; KEGG: ara:Arad_3301 oxidoreductase protein YP_003700974.1 KEGG: sfu:Sfum_0029 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003700975.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_3543 binding-protein-dependent transport systems inner membrane component YP_003700976.1 KEGG: sfu:Sfum_0027 extracellular solute-binding protein YP_003700977.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: dvm:DvMF_1797 molybdenum cofactor synthesis domain protein YP_003700978.1 PFAM: globin; KEGG: protozoan/cyanobacterial globin family protein YP_003700979.1 PFAM: major facilitator superfamily MFS_1; KEGG: cja:CJA_3195 putative macrolide-efflux protein YP_003700980.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: dds:Ddes_0977 2-nitropropane dioxygenase NPD YP_003700981.1 PFAM: glycoside hydrolase family 16; KEGG: cja:CJA_3706 beta glucanse, putative, glu16G YP_003700982.1 PFAM: aldo/keto reductase; KEGG: pin:Ping_2667 aldo/keto reductase YP_003700983.1 KEGG: asa:ASA_3565 HAD superfamily hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase YP_003700984.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc00115 hypothetical protein YP_003700985.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: geo:Geob_2507 aminotransferase class V YP_003700986.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: apl:APL_1180 oxidoreductase YP_003700987.1 PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: ara:Arad_0117 hypothetical protein YP_003700988.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: rhi:NGR_b19940 putative oxidoreductase YP_003700989.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: amc:MADE_00428 twin-arginine translocation pathway signal YP_003700990.1 KEGG: esa:ESA_03275 DNA-binding transcriptional regulator AraC; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain YP_003700991.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ebr:ECB_00410 maltose O-acetyltransferase YP_003700992.1 KEGG: glutaminase; K01425 glutaminase; PFAM: Glutaminase, core YP_003700993.1 SMART: AAA ATPase; KEGG: mmw:Mmwyl1_2572 SMC domain-containing protein YP_003700994.1 PFAM: Protein of unknown function DUF2207, membrane; KEGG: RFX1; regulatory factor X, 1 (influences HLA class II expression) ; K09173 regulatory factor X 1/2/3 YP_003700995.1 PFAM: beta-lactamase domain protein; KEGG: dol:Dole_1748 beta-lactamase domain-containing protein YP_003700996.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: shw:Sputw3181_2851 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: GGDEF domain containing protein YP_003700997.1 KEGG: dze:Dd1591_4133 extracellular solute-binding protein family 1 YP_003700998.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: maq:Maqu_0294 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003700999.1 KEGG: scl:sce1582 nitric-oxide synthase, oxygenase subunit; PFAM: Nitric oxide synthase NOS YP_003701000.1 KEGG: hypothetical protein; PFAM: Aldehyde Dehydrogenase YP_003701003.1 PFAM: fructose-16-bisphosphatase; KEGG: dat:HRM2_08610 Fbp1 YP_003701004.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: Transposase family protein YP_003701005.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ppr:PBPRB0292 hypothetical protein YP_003701007.1 PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003701008.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3633 transposase IS3/IS911 family protein YP_003701012.1 PFAM: Resolvase domain; Recombinase; KEGG: glo:Glov_0859 resolvase domain YP_003701013.1 KEGG: ecr:ECIAI1_2661 conserved hypothetical protein from bacteriophage origin YP_003701016.1 PFAM: sigma-70 region 4 domain protein; KEGG: cco:CCC13826_1021 flagellar biosynthesis sigma factor YP_003701017.1 KEGG: mpt:Mpe_A2373 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003701018.1 PFAM: N-6 DNA methylase; KEGG: hps:HPSH_02355 type II adenine specific methyltransferase YP_003701019.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_4771 transposase IS4 family protein YP_003701020.1 PFAM: IstB domain protein ATP-binding protein; KEGG: psa:PST_3410 ISPsy14, transposition helper protein YP_003701021.1 KEGG: hypothetical protein YP_003701022.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3633 transposase IS3/IS911 family protein YP_003701023.1 PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003701025.1 PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003701026.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3633 transposase IS3/IS911 family protein YP_003701028.1 PFAM: Resolvase domain; Recombinase; KEGG: glo:Glov_0859 resolvase domain YP_003701029.1 PFAM: Resolvase domain; Recombinase; KEGG: hch:HCH_06395 site-specific recombinase YP_003701031.1 KEGG: WW domain containing protein YP_003701035.1 KEGG: mei:Msip34_2845 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; SMART: helix-turn-helix domain protein; Tetratricopeptide repeat YP_003701036.1 PFAM: Resolvase domain; Recombinase; KEGG: dde:Dde_0896 site-specific recombinase YP_003701037.1 PFAM: Resolvase domain; Recombinase; KEGG: mca:MCA2634 prophage LambdaMc01, site-specific recombinase resolvase family protein YP_003701038.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Sporulation domain protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003701039.1 KEGG: dvu:DVU2867 holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis YP_003701041.1 TIGRFAM: phage minor structural protein YP_003701042.1 TIGRFAM: phage tail component YP_003701043.1 KEGG: pmr:PMI1973 phage tail fiber protein (tape measure protein); TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_003701046.1 TIGRFAM: phage major tail protein, phi13 family YP_003701048.1 KEGG: asu:Asuc_1243 HK97 family phage protein; TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein YP_003701049.1 KEGG: asu:Asuc_1242 phage head-tail adaptor, putative; TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein YP_003701050.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: mes:Meso_1889 uncharacterized phage protein YP_003701052.1 KEGG: cjr:CJE1458 HK97 family major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97 YP_003701053.1 PFAM: peptidase S14 ClpP; KEGG: dac:Daci_1633 peptidase S14 ClpP YP_003701054.1 KEGG: bpm:BURPS1710b_1680 HK97 family phage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_003701056.1 PFAM: Terminase; KEGG: bcm:Bcenmc03_1289 terminase YP_003701057.1 KEGG: bph:Bphy_7138 P27 family phage terminase small subunit; TIGRFAM: phage terminase, small subunit, , P27 family; PFAM: terminase small subunit putative P27 YP_003701061.1 KEGG: mca:MCA2655 prophage LambdaMc01, DNA methyltransferase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003701062.1 KEGG: ZNF236; zinc finger protein 236 YP_003701063.1 KEGG: bph:Bphy_7134 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_003701064.1 PFAM: Sigma-70 region 4 type 2 YP_003701067.1 KEGG: ecr:ECIAI1_2669 conserved hypothetical protein from bacteriophage origin; PFAM: SNF2-related protein; SMART: DEAD-like helicase YP_003701068.1 PFAM: VRR-NUC domain protein; KEGG: ypy:YPK_1202 VRR-NUC domain-containing protein YP_003701069.1 PFAM: virulence-associated E family protein; KEGG: dno:DNO_0279 virulence-associated protein VapE1 YP_003701071.1 KEGG: ecr:ECIAI1_2664 putative DNA polymerase from bacteriophage origin; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase YP_003701072.1 KEGG: hde:HDEF_1660 APSE-2 prophage; hypothetical YP_003701073.1 KEGG: ecr:ECIAI1_2661 conserved hypothetical protein from bacteriophage origin YP_003701076.1 PFAM: sigma-70 region 4 domain protein; KEGG: cco:CCC13826_1021 flagellar biosynthesis sigma factor YP_003701078.1 PFAM: restriction endonuclease; KEGG: bph:Bphy_6871 restriction endonuclease YP_003701079.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: vfm:VFMJ11_0190 udp-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003701080.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: pca:Pcar_1467 nucleoside-diphosphate-sugar epimerases YP_003701081.1 KEGG: sbc:SbBS512_E1204 NAD dependent epimerase/dehydratase family YP_003701082.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bja:bll8129 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003701083.1 KEGG: hypothetical protein YP_003701085.1 KEGG: nam:NAMH_1663 hypothetical protein YP_003701086.1 PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: spl:Spea_1408 polysaccharide biosynthesis protein YP_003701087.1 PFAM: glycosyl transferase family 2; KEGG: ecr:ECIAI1_2112 putative membrane glycosyl transferase YP_003701088.1 KEGG: Phosphatidylinositol 3- and 4-kinase family protein; K00888 phosphatidylinositol 4-kinase YP_003701089.1 KEGG: abb:ABBFA_003455 hypothetical protein YP_003701090.1 PFAM: glycosyl transferase group 1; KEGG: fph:Fphi_1479 glycosyltransferase-like protein YP_003701091.1 PFAM: glycosyl transferase group 1; KEGG: dol:Dole_1804 glycosyl transferase group 1 YP_003701092.1 PFAM: glycosyl transferase group 1; KEGG: ftn:FTN_1427 glycosyl transferase, group 1 YP_003701093.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: fph:Fphi_1245 UDP-glucose 4-epimerase YP_003701094.1 PFAM: sugar transferase; KEGG: fph:Fphi_1244 galactosyl transferase YP_003701095.1 KEGG: net:Neut_0515 type II secretion system protein G YP_003701096.1 KEGG: tbd:Tbd_1180 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein YP_003701098.1 KEGG: dat:HRM2_42540 GtaB; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_003701099.1 PFAM: polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: gme:Gmet_1338 polysaccharide biosynthesis protein CapD YP_003701100.1 KEGG: eba:ebA6802 capsular polysaccharide biosynthesis protein; PFAM: PHP domain protein YP_003701101.1 TIGRFAM: capsular exopolysaccharide family; KEGG: mxa:MXAN_1025 capsular exopolysaccharide family protein; PFAM: ATPase-like, ParA/MinD YP_003701102.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: dps:DPPB85 related to exopolysaccharide biosynthesis protein (GumC protein) YP_003701103.1 KEGG: DSPP; dentin sialophosphoprotein YP_003701104.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003701105.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003701107.1 PFAM: glycosyl transferase group 1; KEGG: scl:sce5461 glycogen synthase YP_003701108.1 PFAM: LmbE family protein; KEGG: mlo:mll5304 hypothetical protein YP_003701109.1 KEGG: dal:Dalk_4314 hypothetical protein YP_003701110.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: bac:BamMC406_3703 WecB/TagA/CpsF family glycosyl transferase; PFAM: glycosyl transferase WecB/TagA/CpsF YP_003701111.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: geo:Geob_2139 phospho-N-acetylmuramoyl-pentapeptide-transferase YP_003701112.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: gsu:GSU1854 UDP-N-acetyl-D-mannosamine dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003701113.1 KEGG: scl:sce2259 hypothetical protein; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: polysaccharide pyruvyl transferase YP_003701114.1 PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_3629 glycosyl transferase, group 1 YP_003701115.1 PFAM: virulence factor MVIN family protein; polysaccharide biosynthesis protein; KEGG: sat:SYN_00104 virulence factor protein YP_003701116.1 PFAM: NLP/P60 protein; S-layer domain protein; KEGG: hhe:HH1821 hypothetical protein YP_003701118.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; S-layer domain protein; KEGG: gsu:GSU2075 subtilisin YP_003701119.1 KEGG: hypothetical protein; PFAM: S-layer domain protein; SMART: Lysozyme subfamily 2 YP_003701120.1 KEGG: dde:Dde_1370 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; S-layer domain protein; SMART: cell wall hydrolase/autolysin; SH3 domain protein YP_003701121.1 PFAM: Lytic transglycosylase catalytic; KEGG: scl:sce2557 putative secreted protein YP_003701122.1 PFAM: acyltransferase 3; KEGG: mes:Meso_0485 acyltransferase 3 YP_003701124.1 PFAM: gamma-glutamyltranspeptidase; KEGG: vsp:VS_3081 gamma-glutamyltranspeptidase YP_003701125.1 PFAM: Capsule synthesis protein, CapA; KEGG: gsu:GSU0036 capsule biosynthesis protein, putative YP_003701126.1 KEGG: fph:Fphi_1487 capsule biosynthesis protein CapC YP_003701127.1 PFAM: Mur ligase middle domain protein; KEGG: fph:Fphi_1486 putative capsule biosynthesis protein YP_003701128.1 PFAM: NLP/P60 protein; Peptidoglycan-binding domain 1 protein; KEGG: gbm:Gbem_3368 NLP/P60 protein YP_003701129.1 PFAM: NLP/P60 protein; KEGG: azo:azo2203 putative lipoprotein precusor YP_003701130.1 KEGG: hypothetical protein; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_003701131.1 KEGG: tgr:Tgr7_1674 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003701132.1 KEGG: noc:Noc_2977 anti-sigma regulatory factor (Ser/Thr protein kinase YP_003701133.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: noc:Noc_2221 peptidase S15 YP_003701134.1 PFAM: regulatory protein TetR; KEGG: scl:sce6781 TetR family transcriptional regulator YP_003701135.1 KEGG: dat:HRM2_01240 BetT; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_003701136.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: bch:Bcen2424_6267 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_003701137.1 KEGG: tgr:Tgr7_0580 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003701138.1 KEGG: aav:Aave_4219 L-lysine 6-monooxygenase (NADPH) YP_003701139.1 PFAM: VanZ family protein; KEGG: sat:SYN_03077 hypothetical protein YP_003701140.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: hypothetical protein YP_003701141.1 KEGG: hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003701143.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cja:CJA_2969 acetyltransferase, GNAT family YP_003701144.1 PFAM: Auxin Efflux Carrier; KEGG: gem:GM21_2895 auxin efflux carrier YP_003701145.1 PFAM: Radical SAM domain protein; KEGG: ccv:CCV52592_2101 radical SAM family protein YP_003701146.1 KEGG: esa:ESA_01917 hypothetical protein YP_003701147.1 KEGG: shl:Shal_0406 dimethylsulfoxide reductase chain B; TIGRFAM: dimethylsulfoxide reductase, chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003701148.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ccv:CCV52592_2107 anaerobic dimethyl sulfoxide reductase subunit A YP_003701149.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: ccv:CCV52592_2104 cytoplasmic chaperone YP_003701150.1 KEGG: shl:Shal_2789 transcriptional regulator, CdaR YP_003701151.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pmr:PMI0169 anaerobic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) YP_003701152.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: stm:STM0611 putative oxidoreductase protein YP_003701153.1 PFAM: coenzyme A transferase; KEGG: bxe:Bxe_B1889 putative glutaconate CoA-transferase, subunit B YP_003701154.1 PFAM: coenzyme A transferase; KEGG: bpt:Bpet3678 putative glutaconate CoA transferase subunit A YP_003701155.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aha:AHA_4075 coenzyme A disulfide reductase YP_003701156.1 PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_5293 extracellular solute-binding protein YP_003701157.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dds:Ddes_1365 ethanolamine utilization protein EutN/carboxysome structural protein CcmL YP_003701158.1 PFAM: Propanediol utilization protein; KEGG: dar:Daro_2921 acetate kinase YP_003701159.1 PFAM: microcompartments protein; KEGG: tau:Tola_1684 microcompartments protein YP_003701160.1 PFAM: microcompartments protein; KEGG: maq:Maqu_1232 microcompartments protein YP_003701161.1 PFAM: microcompartments protein; KEGG: aha:AHA_1335 microcompartments family protein YP_003701162.1 PFAM: microcompartments protein; KEGG: aha:AHA_1336 microcompartments family protein YP_003701163.1 PFAM: microcompartments protein; KEGG: yen:YE2736 putative propanediol utilization protein: polyhedral bodies YP_003701164.1 PFAM: Aldehyde Dehydrogenase; KEGG: dal:Dalk_4987 aldehyde dehydrogenase YP_003701165.1 PFAM: class II aldolase/adducin family protein; KEGG: sfu:Sfum_2465 class II aldolase/adducin family protein YP_003701166.1 KEGG: sed:SeD_A2055 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR YP_003701167.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: pca:Pcar_2170 aIF-2BI family translation initiation factor; PFAM: initiation factor 2B related YP_003701168.1 TIGRFAM: 5-methylthioribose kinase; KEGG: dda:Dd703_0922 5-methylthioribose kinase; PFAM: aminoglycoside phosphotransferase YP_003701169.1 PFAM: inner-membrane translocator; KEGG: yen:YE2763 ribose transport system, permease protein YP_003701170.1 KEGG: ypi:YpsIP31758_2423 ribose ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003701171.1 KEGG: esa:ESA_00809 hypothetical protein YP_003701172.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: inosine-uridine preferring nucleoside hydrolase family protein YP_003701173.1 KEGG: kpu:KP1_1855 putative positive response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003701174.1 KEGG: pae:PA3974 LadS; PFAM: response regulator receiver; Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_003701175.1 PFAM: protein of unknown function UPF0132; KEGG: hypothetical protein YP_003701177.1 KEGG: GH20141 gene product from transcript GH20141-RA YP_003701180.1 KEGG: har:HEAR1346 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003701181.1 KEGG: hypothetical protein LOC691864 YP_003701182.1 KEGG: xac:XAC1981 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003701183.1 KEGG: gsu:GSU3052 flagellar basal-body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003701184.1 KEGG: ade:Adeh_0112 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA YP_003701185.1 KEGG: pca:Pcar_2690 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003701186.1 TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein YP_003701187.1 KEGG: glo:Glov_3125 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003701188.1 KEGG: gme:Gmet_3343 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003701189.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: gur:Gura_4233 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003701190.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bav:BAV1052 NADH dehydrogenase I chain K YP_003701191.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: afw:Anae109_4347 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_003701192.1 KEGG: ndhI; NADH dehydrogenase 18 kDa subunit ; K05580 NADH dehydrogenase I subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003701193.1 KEGG: geo:Geob_1268 NADH dehydrogenase (quinone); PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_003701194.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: cla:Cla_1442 NADH-quinone oxidoreductase, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_003701195.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: scl:sce9060 NADH dehydrogenase (ubiquinone) YP_003701196.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: ott:OTT_0912 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003701197.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: bgl:bglu_1g25940 putative transmembrane NADH dehydrogenase I(chain A), NuoA YP_003701198.1 KEGG: sfu:Sfum_2581 ATP synthase F1, epsilon subunit; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like YP_003701199.1 SMART: AAA ATPase; TIGRFAM: ATP synthase F1, beta subunit; KEGG: gur:Gura_4263 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003701200.1 KEGG: glo:Glov_3171 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_003701201.1 TIGRFAM: ATP synthase F1, alpha subunit; KEGG: pca:Pcar_3133 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; HerA-ATP synthase, barrel domain; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003701202.1 KEGG: glo:Glov_3173 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_003701203.1 KEGG: noc:Noc_3078 F0F1 ATP synthase subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_003701204.1 KEGG: cha:CHAB381_0646 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_003701205.1 KEGG: abu:Abu_2030 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_003701206.1 PFAM: ATP synthase I YP_003701207.1 KEGG: sfu:Sfum_1607 hypothetical protein YP_003701208.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: vvy:VV0341 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003701209.1 TIGRFAM: uracil phosphoribosyltransferase; KEGG: dac:Daci_3518 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003701210.1 KEGG: pca:Pcar_1442 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003701211.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: aeh:Mlg_1560 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003701212.1 KEGG: dal:Dalk_3027 hypothetical protein YP_003701213.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mei:Msip34_0541 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003701214.1 PFAM: conserved hypothetical protein YP_003701215.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: ribose 5-phosphate isomerase B family protein ; K01808 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase YP_003701216.1 KEGG: glo:Glov_3335 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003701217.1 KEGG: bpy:Bphyt_4054 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003701218.1 KEGG: YALI0E09449p ; K07566 putative translation factor; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein YP_003701219.1 KEGG: ppd:Ppro_3005 HemK family modification methylase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_003701220.1 KEGG: pca:Pcar_2692 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_003701221.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: gme:Gmet_1148 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003701222.1 KEGG: vfm:VFMJ11_A0992 toxin corregulated pilus biosynthesis protein I; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003701223.1 KEGG: mxa:MXAN_5072 thymidine kinase; PFAM: thymidine kinase YP_003701224.1 KEGG: aeh:Mlg_2751 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_003701225.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; KEGG: gbm:Gbem_3713 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_003701226.1 KEGG: aeh:Mlg_2217 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003701227.1 TIGRFAM: transaldolase; KEGG: dat:HRM2_27510 TalC; PFAM: Transaldolase YP_003701228.1 TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: kpu:KP1_1211 putative type II fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003701229.1 KEGG: gme:Gmet_0555 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_003701230.1 PFAM: Protein of unknown function DUF2529 YP_003701231.1 TIGRFAM: CTP synthase; KEGG: sat:SYN_02922 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003701232.1 PFAM: DNA-directed RNA polymerase delta subunit; KEGG: hypothetical protein YP_003701233.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: gme:Gmet_1722 methylmalonyl-CoA mutase-like; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; ArgK protein YP_003701234.1 KEGG: sfu:Sfum_0456 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein YP_003701235.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_2832 acyl-CoA dehydrogenase domain protein YP_003701236.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: dal:Dalk_3776 acyl-CoA dehydrogenase domain protein YP_003701237.1 KEGG: dat:HRM2_10050 3-hydroxyacyl-CoA dehydrogenase (beta-hydroxybutyryl-CoA dehydrogenase) (BhbD); PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_003701238.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bgl:bglu_1g14720 thiolase; PFAM: Thiolase YP_003701239.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sat:SYN_02638 iron-sulphur-binding reductase YP_003701240.1 TIGRFAM: XapX domain protein; KEGG: asa:ASA_3656 hypothetical protein YP_003701241.1 KEGG: similar to spermidine synthase ; K00797 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_003701244.1 KEGG: rpa:RPA3265 putative ABC transporter; PFAM: ABC transporter related; cyclic nucleotide-binding; ABC transporter transmembrane region; SMART: AAA ATPase; cyclic nucleotide-binding YP_003701245.1 KEGG: pmy:Pmen_2132 hypothetical protein YP_003701246.1 KEGG: dol:Dole_2132 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003701247.1 KEGG: transcriptional regulator, gntR family protein; PFAM: regulatory protein GntR HTH; LexA DNA-binding domain protein; SMART: regulatory protein GntR HTH YP_003701249.1 KEGG: shn:Shewana3_3299 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003701250.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: gbm:Gbem_2283 arginyl-tRNA synthetase YP_003701251.1 PFAM: Domain of unknown function DUF1934 YP_003701252.1 KEGG: bph:Bphy_4506 XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003701253.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: pca:Pcar_0906 putative ATP-binding component of dipeptide transport system; SMART: AAA ATPase YP_003701254.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; SMART: AAA ATPase YP_003701255.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_12354 oligopeptide ABC transporter (permease) YP_003701256.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_12353 oligopeptide ABC transporter (permease) YP_003701257.1 PFAM: extracellular solute-binding protein family 5; KEGG: ara:Arad_12352 oligopeptide ABC transporter substrate-binding protein YP_003701258.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bpt:Bpet0350 putative peptidase YP_003701259.1 KEGG: vpa:VPA0169 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_003701260.1 KEGG: kpu:KP1_0952 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_003701261.1 PFAM: Protein of unknown function YwhD YP_003701262.1 KEGG: azo:azo2429 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_003701263.1 KEGG: scl:sce3000 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003701265.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: asa:ASA_1258 protein ligase YP_003701267.1 KEGG: dps:DP2845 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_003701268.1 KEGG: dde:Dde_3241 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_003701269.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmw:Mmwyl1_1337 NADH:flavin oxidoreductase/NADH oxidase YP_003701270.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SM_b21633 enoyl-CoA hydratase YP_003701271.1 PFAM: Chlorite dismutase YP_003701272.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: rle:pRL90127 putative glycosyl hydrolase YP_003701273.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_2510 ABC sugar transporter inner membrane binding protein YP_003701274.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90124 putative transmembrane binding-protein-dependent transporter YP_003701275.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b21604 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor YP_003701276.1 KEGG: ara:Arad_9458 transcriptional regulator protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003701277.1 PFAM: protein of unknown function DUF423; KEGG: mxa:MXAN_2377 hypothetical protein YP_003701278.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tgr:Tgr7_0656 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003701280.1 KEGG: hypothetical protein; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: Oligopeptidase F; peptidase M3A and M3B thimet/oligopeptidase F YP_003701281.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bba:Bd1175 nucleoside-diphosphate-sugar epimerase YP_003701282.1 KEGG: glo:Glov_2787 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003701283.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Shikimate/quinate 5-dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; KEGG: dat:HRM2_44930 YwkC YP_003701285.1 KEGG: afw:Anae109_4462 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003701286.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: dda:Dd703_3595 sucrose-6-phosphate hydrolase; SMART: glycoside hydrolase family 32 YP_003701287.1 PFAM: PfkB domain protein; KEGG: hypothetical protein LOC100242115 ; K00847 fructokinase YP_003701288.1 KEGG: aha:AHA_3207 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003701290.1 PFAM: LmbE family protein; KEGG: pla:Plav_1416 LmbE family protein YP_003701292.1 PFAM: sulfatase; KEGG: afw:Anae109_1028 sulfatase YP_003701293.1 PFAM: peptidase M29 aminopeptidase II; KEGG: smd:Smed_3504 peptidase M29 aminopeptidase II YP_003701294.1 PFAM: nucleoside recognition domain protein; KEGG: sbp:Sbal223_1168 nucleoside recognition domain protein YP_003701295.1 KEGG: expressed hypothetical protein ; K07567 TdcF protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_003701296.1 TIGRFAM: pantothenate kinase; KEGG: pla:Plav_1229 pantothenate kinase YP_003701297.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eba:ebA5320 putative 3-hydroxyacyl-CoA dehydrogenase precursor YP_003701298.1 KEGG: eca:ECA2964 putative peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_003701299.1 PFAM: type IV pilus assembly PilZ YP_003701300.1 KEGG: dat:HRM2_07710 RacD2; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003701301.1 TIGRFAM: glutaminyl-tRNA synthetase; KEGG: gur:Gura_4167 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_003701302.1 KEGG: acp:A2cp1_1583 PUA domain containing protein YP_003701303.1 KEGG: sfr:Sfri_4063 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_003701305.1 KEGG: gsu:GSU1456 hypothetical protein YP_003701306.1 PFAM: glycosyl transferase family 2; chitin synthase; KEGG: sat:SYN_00856 glycosyltransferase YP_003701307.1 KEGG: mlo:mlr6693 hypothetical protein YP_003701308.1 KEGG: gur:Gura_2178 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding YP_003701309.1 KEGG: abo:ABO_0807 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003701310.1 TIGRFAM: homoserine kinase; KEGG: hhe:HH1013 homoserine kinase; PFAM: GHMP kinase YP_003701311.1 KEGG: hso:HS_1489 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase YP_003701312.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: dds:Ddes_1078 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_003701313.1 KEGG: hypothetical protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003701314.1 TIGRFAM: aspartate kinase; KEGG: Os01g0927900; hypothetical protein ; K00928 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003701315.1 PFAM: extracellular solute-binding protein family 5; KEGG: bpt:Bpet1794 putative binding-protein-dependent transport periplasmic protein YP_003701316.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpe:BP2394 putative binding-protein-dependent transport permease YP_003701317.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1184 dipeptide ABC transporter, permease protein YP_003701318.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; SMART: AAA ATPase YP_003701319.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bbt:BBta_6951 oligopeptide ABC transporter ATP-binding protein; SMART: AAA ATPase YP_003701320.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ftn:FTN_1525 phosphatidyltransferase YP_003701321.1 KEGG: pct:PC1_1364 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003701322.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0309 ABC transporter, permease protein, putative YP_003701323.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_00340 putative ABC-type transporter permease protein YP_003701324.1 PFAM: extracellular solute-binding protein family 1; KEGG: dde:Dde_0759 putative ABC transporter solute-binding protein YP_003701325.1 PFAM: SNARE associated Golgi protein; KEGG: vfm:VFMJ11_A0121 transporter YP_003701326.1 KEGG: vpa:VP1200 putative thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003701327.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: vpa:VP1198 putative reductase YP_003701328.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: vpa:VP1199 putative glutamate synthase, small chain YP_003701329.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: glo:Glov_1442 NAD(P)H dehydrogenase (quinone) YP_003701330.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: cvi:CV_0964 hypothetical protein; SMART: GGDEF domain containing protein YP_003701331.1 KEGG: xac:XAC3993 two-component system regulatory protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003701332.1 KEGG: sbn:Sbal195_0353 integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003701333.1 PFAM: fatty acid desaturase; KEGG: hha:Hhal_0399 fatty acid desaturase YP_003701334.1 PFAM: ABC-2 type transporter; KEGG: sat:SYN_01665 ABC-type multidrug transport system, permease component YP_003701335.1 TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: sat:SYN_01666 antibiotic export ATP-binding protein; SMART: AAA ATPase YP_003701336.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; KEGG: glo:Glov_2918 integral membrane sensor signal transduction histidine kinase; SMART: GGDEF domain containing protein YP_003701337.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: avn:Avin_04080 malate:quinone-oxidoreductase; PFAM: Malate:quinone-oxidoreductase; FAD dependent oxidoreductase YP_003701339.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aeh:Mlg_1916 hypothetical protein YP_003701340.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: rfr:Rfer_0435 NAD-dependent epimerase/dehydratase YP_003701341.1 KEGG: vvy:VV0938 16S rRNA uridine-516 pseudouridylate synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003701342.1 PFAM: protein of unknown function DUF163; KEGG: pca:Pcar_2576 hypothetical protein YP_003701344.1 KEGG: sfu:Sfum_2005 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein YP_003701345.1 PFAM: beta-lactamase domain protein; KEGG: dps:DP2606 hypothetical protein YP_003701346.1 PFAM: Protein of unknown function YycH YP_003701347.1 PFAM: YycH family protein YP_003701348.1 SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; TIGRFAM: PAS sensor protein; KEGG: pca:Pcar_0654 two-component sensor histidine kinase PhoR; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003701349.1 KEGG: sat:SYN_00981 response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003701350.1 KEGG: hypothetical protein; PFAM: Peptidase M23; G5 domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003701351.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: gem:GM21_0565 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_003701352.1 KEGG: gme:Gmet_2568 primary replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein YP_003701353.1 KEGG: pca:Pcar_1996 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_003701354.1 KEGG: abu:Abu_2037 exopolyphosphatase-related protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: GGDEF domain containing protein YP_003701355.1 PFAM: Protein of unknown function DUF2232, membrane; KEGG: gbm:Gbem_2762 hypothetical protein YP_003701356.1 KEGG: bab:bbp509 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_003701357.1 KEGG: gem:GM21_4062 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003701358.1 KEGG: amc:MADE_03778 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6 YP_003701359.1 KEGG: pca:Pcar_2000 translation-associated GTPase; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related YP_003701360.1 PFAM: protein of unknown function DUF951 YP_003701361.1 PFAM: protein of unknown function DUF554; KEGG: dat:HRM2_02860 hypothetical protein YP_003701362.1 KEGG: gur:Gura_2313 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V YP_003701363.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: dal:Dalk_3716 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003701364.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gur:Gura_4256 cobyrinic acid a,c-diamide synthase YP_003701365.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: gme:Gmet_3412 chromosome segregation DNA-binding protein; SMART: ParB domain protein nuclease YP_003701366.1 KEGG: hypothetical protein ; K03501 glucose inhibited division protein B; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_003701367.1 KEGG: gsu:GSU3464 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003701368.1 KEGG: gbm:Gbem_4058 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_003701369.1 KEGG: sfu:Sfum_2598 single-stranded nucleic acid binding R3H domain-containing protein; PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein YP_003701370.1 KEGG: sat:SYN_01014 60 kDa inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_003701371.1 PFAM: protein of unknown function DUF37; KEGG: afw:Anae109_4507 hypothetical protein YP_003701372.1 KEGG: sat:SYN_01012 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_003701373.1 KEGG: saz:Sama_0012 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34