-- dump date 20140618_212518 -- class Genbank::CDS -- table cds_note -- id note YP_003971894.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_003971895.1 COG2946 Putative phage replication protein RstA YP_003971899.1 COG0495 Leucyl-tRNA synthetase YP_003971908.1 COG3451 Type IV secretory pathway, VirB4 components YP_003971912.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003971916.1 COG0457 FOG: TPR repeat YP_003971917.1 COG1724 Predicted periplasmic or secreted lipoprotein YP_003971919.1 COG3239 Fatty acid desaturase YP_003971920.1 COG1278 Cold shock proteins YP_003971921.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_003971922.1 COG1802 Transcriptional regulators YP_003971926.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_003971927.1 COG2364 Predicted membrane protein YP_003971928.1 COG1846 Transcriptional regulators YP_003971929.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003971930.1 COG2808 Transcriptional regulator YP_003971931.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003971933.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_003971934.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_003971935.1 COG0477 Permeases of the major facilitator superfamily YP_003971936.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003971937.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_003971938.1 COG1284 Uncharacterized conserved protein YP_003971940.1 COG0640 Predicted transcriptional regulators YP_003971941.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_003971942.1 COG0394 Protein-tyrosine-phosphatase YP_003971944.1 COG0591 Na+/proline symporter YP_003971946.1 COG1846 Transcriptional regulators YP_003971947.1 COG2409 Predicted drug exporters of the RND superfamily YP_003971948.1 COG3711 Transcriptional antiterminator YP_003971949.1 COG1445 Phosphotransferase system fructose-specific component IIB YP_003971950.1 COG1482 Phosphomannose isomerase YP_003971951.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003971952.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_003971953.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003971954.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_003971955.1 COG1522 Transcriptional regulators YP_003971956.1 COG4122 Predicted O-methyltransferase YP_003971957.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_003971958.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003971962.1 COG2602 Beta-lactamase class D YP_003971964.1 COG0477 Permeases of the major facilitator superfamily YP_003971965.1 COG0371 Glycerol dehydrogenase and related enzymes YP_003971966.1 COG3858 Predicted glycosyl hydrolase YP_003971967.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_003971970.1 COG1785 Alkaline phosphatase YP_003971972.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_003971973.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_003971974.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_003971976.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_003971977.1 COG1846 Transcriptional regulators YP_003971979.1 COG2814 Arabinose efflux permease YP_003971980.1 COG2186 Transcriptional regulators YP_003971981.1 COG2807 Cyanate permease YP_003971982.1 COG4392 Predicted membrane protein YP_003971983.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_003971984.1 COG1378 Predicted transcriptional regulators YP_003971985.1 COG0611 Thiamine monophosphate kinase YP_003971986.1 COG0802 Predicted ATPase or kinase YP_003971987.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_003971988.1 COG0456 Acetyltransferases YP_003971989.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_003971990.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_003971991.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_003971992.1 COG2344 AT-rich DNA-binding protein YP_003971993.1 COG1826 Sec-independent protein secretion pathway components YP_003971994.1 COG0805 Sec-independent protein secretion pathway component TatC YP_003971996.1 COG1266 Predicted metal-dependent membrane protease YP_003971997.1 COG0234 Co-chaperonin GroES (HSP10) YP_003971998.1 COG0459 Chaperonin GroEL (HSP60 family) YP_003971999.1 COG4585 Signal transduction histidine kinase YP_003972001.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_003972002.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_003972003.1 COG0541 Signal recognition particle GTPase YP_003972004.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_003972005.1 COG2211 Na+/melibiose symporter and related transporters YP_003972006.1 COG0524 Sugar kinases, ribokinase family YP_003972007.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_003972008.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_003972009.1 COG1512 Beta-propeller domains of methanol dehydrogenase type YP_003972010.1 COG4260 Putative virion core protein (lumpy skin disease virus) YP_003972012.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003972014.1 COG0778 Nitroreductase YP_003972015.1 COG1846 Transcriptional regulators YP_003972016.1 COG0477 Permeases of the major facilitator superfamily YP_003972017.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_003972019.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_003972021.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003972023.1 COG2132 Putative multicopper oxidases YP_003972024.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_003972025.1 COG3594 Fucose 4-O-acetylase and related acetyltransferases YP_003972026.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_003972027.1 COG0714 MoxR-like ATPases YP_003972028.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_003972029.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_003972030.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_003972031.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003972033.1 COG2252 Permeases YP_003972036.1 COG4843 Uncharacterized protein conserved in bacteria YP_003972038.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_003972039.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_003972040.1 COG0015 Adenylosuccinate lyase YP_003972041.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_003972042.1 COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component YP_003972043.1 COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain YP_003972044.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_003972045.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_003972046.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_003972047.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_003972048.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_003972049.1 COG0151 Phosphoribosylamine-glycine ligase YP_003972050.1 COG1522 Transcriptional regulators YP_003972051.1 COG0531 Amino acid transporters YP_003972053.1 COG1001 Adenine deaminase YP_003972055.1 COG4496 Uncharacterized protein conserved in bacteria YP_003972056.1 COG0069 Glutamate synthase domain 2 YP_003972057.1 COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold YP_003972058.1 COG0210 Superfamily I DNA and RNA helicases YP_003972059.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_003972060.1 COG4851 Protein involved in sex pheromone biosynthesis YP_003972062.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_003972063.1 COG1285 Uncharacterized membrane protein YP_003972064.1 COG0591 Na+/proline symporter YP_003972065.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_003972066.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_003972067.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_003972068.1 COG1309 Transcriptional regulator YP_003972069.1 COG0841 Cation/multidrug efflux pump YP_003972070.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_003972071.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_003972072.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_003972074.1 COG0236 Acyl carrier protein YP_003972075.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_003972076.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_003972077.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_003972078.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003972079.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003972080.1 COG0842 ABC-type multidrug transport system, permease component YP_003972084.1 COG0457 FOG: TPR repeat YP_003972086.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003972088.1 COG3391 Uncharacterized conserved protein YP_003972092.1 COG0457 FOG: TPR repeat YP_003972094.1 COG0217 Uncharacterized conserved protein YP_003972097.1 COG3546 Mn-containing catalase YP_003972098.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972100.1 COG5578 Predicted integral membrane protein YP_003972101.1 COG2972 Predicted signal transduction protein with a C-terminal ATPase domain YP_003972102.1 COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_003972103.1 COG1653 ABC-type sugar transport system, periplasmic component YP_003972104.1 COG1175 ABC-type sugar transport systems, permease components YP_003972105.1 COG0395 ABC-type sugar transport system, permease component YP_003972106.1 COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins YP_003972107.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_003972108.1 COG2755 Lysophospholipase L1 and related esterases YP_003972110.1 COG5578 Predicted integral membrane protein YP_003972113.1 COG2755 Lysophospholipase L1 and related esterases YP_003972114.1 COG1874 Beta-galactosidase YP_003972116.1 COG1653 ABC-type sugar transport system, periplasmic component YP_003972117.1 COG4209 ABC-type polysaccharide transport system, permease component YP_003972118.1 COG0395 ABC-type sugar transport system, permease component YP_003972119.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_003972120.1 COG2323 Predicted membrane protein YP_003972121.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_003972122.1 COG0346 Lactoylglutathione lyase and related lyases YP_003972123.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003972124.1 COG5583 Uncharacterized small protein YP_003972126.1 COG0670 Integral membrane protein, interacts with FtsH YP_003972128.1 COG2124 Cytochrome P450 YP_003972130.1 COG1846 Transcriptional regulators YP_003972131.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003972132.1 COG0842 ABC-type multidrug transport system, permease component YP_003972134.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_003972135.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_003972136.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_003972138.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003972140.1 COG0477 Permeases of the major facilitator superfamily YP_003972141.1 COG0531 Amino acid transporters YP_003972142.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003972143.1 COG0840 Methyl-accepting chemotaxis protein YP_003972144.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003972146.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_003972147.1 COG0789 Predicted transcriptional regulators YP_003972148.1 COG0477 Permeases of the major facilitator superfamily YP_003972149.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_003972150.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_003972151.1 COG0513 Superfamily II DNA and RNA helicases YP_003972152.1 COG0457 FOG: TPR repeat YP_003972154.1 COG2130 Putative NADP-dependent oxidoreductases YP_003972155.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_003972156.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003972157.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003972158.1 COG4594 ABC-type Fe3+-citrate transport system, periplasmic component YP_003972161.1 COG3866 Pectate lyase YP_003972162.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972163.1 COG0471 Di- and tricarboxylate transporters YP_003972168.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_003972169.1 COG4565 Response regulator of citrate/malate metabolism YP_003972170.1 COG3181 Uncharacterized protein conserved in bacteria YP_003972171.1 COG2851 H+/citrate symporter YP_003972172.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003972173.1 COG4362 Nitric oxide synthase, oxygenase domain YP_003972174.1 COG1254 Acylphosphatases YP_003972175.1 COG2258 Uncharacterized protein conserved in bacteria YP_003972179.1 COG0024 Methionine aminopeptidase YP_003972180.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_003972181.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_003972183.1 COG1115 Na+/alanine symporter YP_003972184.1 COG1264 Phosphotransferase system IIB components YP_003972185.1 COG0366 Glycosidases YP_003972186.1 COG2188 Transcriptional regulators YP_003972187.1 COG0778 Nitroreductase YP_003972188.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_003972189.1 COG0693 Putative intracellular protease/amidase YP_003972190.1 COG1609 Transcriptional regulators YP_003972192.1 COG0477 Permeases of the major facilitator superfamily YP_003972193.1 COG0169 Shikimate 5-dehydrogenase YP_003972194.1 COG0710 3-dehydroquinate dehydratase YP_003972195.1 COG0477 Permeases of the major facilitator superfamily YP_003972197.1 COG4840 Uncharacterized protein conserved in bacteria YP_003972198.1 COG0394 Protein-tyrosine-phosphatase YP_003972200.1 COG1295 Predicted membrane protein YP_003972202.1 COG0477 Permeases of the major facilitator superfamily YP_003972203.1 COG0387 Ca2+/H+ antiporter YP_003972205.1 COG0668 Small-conductance mechanosensitive channel YP_003972206.1 COG0535 Predicted Fe-S oxidoreductases YP_003972208.1 COG0726 Predicted xylanase/chitin deacetylase YP_003972209.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003972211.1 COG0598 Mg2+ and Co2+ transporters YP_003972212.1 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase YP_003972213.1 COG1217 Predicted membrane GTPase involved in stress response YP_003972214.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_003972215.1 COG0042 tRNA-dihydrouridine synthase YP_003972217.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_003972218.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_003972219.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_003972220.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_003972221.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_003972223.1 COG1742 Uncharacterized conserved protein YP_003972227.1 COG4842 Uncharacterized protein conserved in bacteria YP_003972228.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_003972229.1 COG1737 Transcriptional regulators YP_003972230.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_003972231.1 COG5434 Endopolygalacturonase YP_003972233.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003972234.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003972235.1 COG2259 Predicted membrane protein YP_003972236.1 COG2514 Predicted ring-cleavage extradiol dioxygenase YP_003972237.1 COG0842 ABC-type multidrug transport system, permease component YP_003972238.1 COG1695 Predicted transcriptional regulators YP_003972239.1 COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation YP_003972240.1 COG2732 Barstar, RNAse (barnase) inhibitor YP_003972241.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_003972243.1 COG0477 Permeases of the major facilitator superfamily YP_003972244.1 COG1846 Transcriptional regulators YP_003972245.1 COG0392 Predicted integral membrane protein YP_003972246.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_003972247.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003972248.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003972249.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_003972250.1 COG0778 Nitroreductase YP_003972253.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_003972254.1 COG2137 Uncharacterized protein conserved in bacteria YP_003972256.1 COG2814 Arabinose efflux permease YP_003972259.1 COG4991 Uncharacterized protein with a bacterial SH3 domain homologue YP_003972260.1 COG5658 Predicted integral membrane protein YP_003972261.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003972262.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003972264.1 COG4485 Predicted membrane protein YP_003972265.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_003972266.1 COG1194 A/G-specific DNA glycosylase YP_003972268.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003972272.1 COG3557 Uncharacterized domain/protein associated with RNAses G and E YP_003972273.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003972274.1 COG4129 Predicted membrane protein YP_003972275.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_003972276.1 COG1225 Peroxiredoxin YP_003972277.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_003972281.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_003972282.1 COG5577 Spore coat protein YP_003972284.1 COG4326 Sporulation control protein YP_003972285.1 COG3340 Peptidase E YP_003972286.1 COG0422 Thiamine biosynthesis protein ThiC YP_003972288.1 COG0753 Catalase YP_003972289.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_003972290.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_003972291.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_003972292.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_003972293.1 COG0199 Ribosomal protein S14 YP_003972295.1 COG1476 Predicted transcriptional regulators YP_003972296.1 COG3382 Uncharacterized conserved protein YP_003972297.1 COG1600 Uncharacterized Fe-S protein YP_003972299.1 COG0219 Predicted rRNA methylase (SpoU class) YP_003972301.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_003972302.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_003972304.1 COG2766 Putative Ser protein kinase YP_003972305.1 COG2718 Uncharacterized conserved protein YP_003972306.1 COG1846 Transcriptional regulators YP_003972307.1 COG1566 Multidrug resistance efflux pump YP_003972308.1 COG0477 Permeases of the major facilitator superfamily YP_003972309.1 COG0655 Multimeric flavodoxin WrbA YP_003972312.1 COG1725 Predicted transcriptional regulators YP_003972313.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003972314.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003972315.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_003972316.1 COG1278 Cold shock proteins YP_003972318.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_003972319.1 COG2199 FOG: GGDEF domain YP_003972320.1 COG1823 Predicted Na+/dicarboxylate symporter YP_003972323.1 COG5577 Spore coat protein YP_003972324.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_003972325.1 COG4085 Predicted RNA-binding protein, contains TRAM domain YP_003972326.1 COG3764 Sortase (surface protein transpeptidase) YP_003972327.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_003972329.1 COG0517 FOG: CBS domain YP_003972330.1 COG0637 Predicted phosphatase/phosphohexomutase YP_003972331.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972332.1 COG0679 Predicted permeases YP_003972333.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_003972334.1 COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) YP_003972335.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_003972336.1 COG0554 Glycerol kinase YP_003972337.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_003972338.1 COG1109 Phosphomannomutase YP_003972339.1 COG2203 FOG: GAF domain YP_003972340.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_003972341.1 COG0431 Predicted flavoprotein YP_003972344.1 COG1388 FOG: LysM repeat YP_003972345.1 COG1959 Predicted transcriptional regulator YP_003972347.1 COG2719 Uncharacterized conserved protein YP_003972348.1 COG1785 Alkaline phosphatase YP_003972349.1 COG1388 FOG: LysM repeat YP_003972350.1 COG0583 Transcriptional regulator YP_003972351.1 COG0372 Citrate synthase YP_003972352.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003972353.1 COG0531 Amino acid transporters YP_003972354.1 COG0733 Na+-dependent transporters of the SNF family YP_003972355.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_003972356.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972357.1 COG0833 Amino acid transporters YP_003972358.1 COG4187 Arginine degradation protein (predicted deacylase) YP_003972359.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003972360.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_003972362.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_003972363.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003972364.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_003972365.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003972366.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_003972367.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_003972368.1 COG1253 Hemolysins and related proteins containing CBS domains YP_003972369.1 COG0789 Predicted transcriptional regulators YP_003972371.1 COG1253 Hemolysins and related proteins containing CBS domains YP_003972373.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_003972374.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_003972376.1 COG0668 Small-conductance mechanosensitive channel YP_003972377.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_003972378.1 COG0726 Predicted xylanase/chitin deacetylase YP_003972379.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_003972380.1 COG1757 Na+/H+ antiporter YP_003972381.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_003972382.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003972383.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003972384.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_003972388.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_003972390.1 COG4399 Uncharacterized protein conserved in bacteria YP_003972391.1 COG3679 Uncharacterized conserved protein YP_003972392.1 COG4335 DNA alkylation repair enzyme YP_003972393.1 COG0561 Predicted hydrolases of the HAD superfamily YP_003972394.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_003972395.1 COG3486 Lysine/ornithine N-monooxygenase YP_003972396.1 COG0475 Kef-type K+ transport systems, membrane components YP_003972397.1 COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels YP_003972399.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_003972401.1 COG4152 ABC-type uncharacterized transport system, ATPase component YP_003972402.1 COG1668 ABC-type Na+ efflux pump, permease component YP_003972403.1 COG0420 DNA repair exonuclease YP_003972404.1 COG4717 Uncharacterized conserved protein YP_003972405.1 COG3481 Predicted HD-superfamily hydrolase YP_003972407.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_003972411.1 COG1846 Transcriptional regulators YP_003972412.1 COG4980 Gas vesicle protein YP_003972415.1 COG1932 Phosphoserine aminotransferase YP_003972416.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_003972417.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003972418.1 COG4473 Predicted ABC-type exoprotein transport system, permease component YP_003972420.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_003972422.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_003972423.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_003972424.1 COG0407 Uroporphyrinogen-III decarboxylase YP_003972425.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_003972426.1 COG1232 Protoporphyrinogen oxidase YP_003972427.1 COG1309 Transcriptional regulator YP_003972428.1 COG1511 Predicted membrane protein YP_003972429.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_003972431.1 COG1363 Cellulase M and related proteins YP_003972432.1 COG1301 Na+/H+-dicarboxylate symporters YP_003972433.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_003972434.1 COG0095 Lipoate-protein ligase A YP_003972435.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_003972436.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_003972438.1 COG0501 Zn-dependent protease with chaperone function YP_003972439.1 COG1404 Subtilisin-like serine proteases YP_003972440.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972441.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_003972442.1 COG4594 ABC-type Fe3+-citrate transport system, periplasmic component YP_003972443.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003972444.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003972445.1 COG0406 Fructose-2,6-bisphosphatase YP_003972449.1 COG1960 Acyl-CoA dehydrogenases YP_003972450.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003972451.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003972452.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_003972453.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_003972455.1 COG0840 Methyl-accepting chemotaxis protein YP_003972456.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_003972457.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003972459.1 COG4903 Genetic competence transcription factor YP_003972461.1 COG0591 Na+/proline symporter YP_003972464.1 COG0398 Uncharacterized conserved protein YP_003972465.1 COG0681 Signal peptidase I YP_003972466.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003972467.1 COG1846 Transcriptional regulators YP_003972468.1 COG3180 Putative ammonia monooxygenase YP_003972469.1 COG1145 Ferredoxin YP_003972470.1 COG1633 Uncharacterized conserved protein YP_003972471.1 COG3857 ATP-dependent nuclease, subunit B YP_003972472.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_003972473.1 COG0420 DNA repair exonuclease YP_003972474.1 COG0419 ATPase involved in DNA repair YP_003972475.1 COG1403 Restriction endonuclease YP_003972479.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_003972482.1 COG2311 Predicted membrane protein YP_003972485.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_003972487.1 COG1404 Subtilisin-like serine proteases YP_003972489.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_003972490.1 COG1562 Phytoene/squalene synthetase YP_003972491.1 COG0534 Na+-driven multidrug efflux pump YP_003972492.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_003972493.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_003972494.1 COG1609 Transcriptional regulators YP_003972495.1 COG0673 Predicted dehydrogenases and related proteins YP_003972497.1 COG1082 Sugar phosphate isomerases/epimerases YP_003972498.1 COG2318 Uncharacterized protein conserved in bacteria YP_003972499.1 COG1279 Lysine efflux permease YP_003972501.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_003972502.1 COG1357 Uncharacterized low-complexity proteins YP_003972504.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003972505.1 COG0529 Adenylylsulfate kinase and related kinases YP_003972506.1 COG2046 ATP sulfurylase (sulfate adenylyltransferase) YP_003972507.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_003972508.1 COG2045 Phosphosulfolactate phosphohydrolase and related enzymes YP_003972509.1 COG1809 Uncharacterized conserved protein YP_003972510.1 COG1284 Uncharacterized conserved protein YP_003972511.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_003972512.1 COG0477 Permeases of the major facilitator superfamily YP_003972513.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972514.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972515.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_003972516.1 COG1666 Uncharacterized protein conserved in bacteria YP_003972517.1 COG2996 Uncharacterized protein conserved in bacteria YP_003972521.1 COG1307 Uncharacterized protein conserved in bacteria YP_003972522.1 COG1284 Uncharacterized conserved protein YP_003972523.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_003972526.1 COG0561 Predicted hydrolases of the HAD superfamily YP_003972527.1 COG1073 Hydrolases of the alpha/beta superfamily YP_003972528.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_003972530.1 COG0277 FAD/FMN-containing dehydrogenases YP_003972531.1 COG0477 Permeases of the major facilitator superfamily YP_003972532.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_003972533.1 COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) YP_003972534.1 COG0548 Acetylglutamate kinase YP_003972535.1 COG4992 Ornithine/acetylornithine aminotransferase YP_003972536.1 COG0505 Carbamoylphosphate synthase small subunit YP_003972537.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_003972538.1 COG0078 Ornithine carbamoyltransferase YP_003972543.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein YP_003972546.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_003972547.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_003972548.1 COG5504 Predicted Zn-dependent protease YP_003972549.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_003972550.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_003972551.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_003972552.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_003972554.1 COG0180 Tryptophanyl-tRNA synthetase YP_003972555.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_003972556.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_003972557.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_003972558.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_003972559.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_003972561.1 COG1306 Uncharacterized conserved protein YP_003972563.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_003972564.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_003972565.1 COG4862 Negative regulator of genetic competence, sporulation and motility YP_003972566.1 COG4469 Competence protein YP_003972567.1 COG1164 Oligoendopeptidase F YP_003972569.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_003972570.1 COG2346 Truncated hemoglobins YP_003972571.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003972572.1 COG4116 Uncharacterized protein conserved in bacteria YP_003972573.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_003972574.1 COG2357 Uncharacterized protein conserved in bacteria YP_003972575.1 COG0061 Predicted sugar kinase YP_003972576.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_003972577.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_003972578.1 COG0475 Kef-type K+ transport systems, membrane components YP_003972579.1 COG0819 Putative transcription activator YP_003972580.1 COG0352 Thiamine monophosphate synthase YP_003972581.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_003972582.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_003972583.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_003972584.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_003972585.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_003972586.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_003972598.1 COG0210 Superfamily I DNA and RNA helicases YP_003972603.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972604.1 COG1514 2'-5' RNA ligase YP_003972605.1 COG2382 Enterochelin esterase and related enzymes YP_003972606.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_003972607.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_003972608.1 COG5505 Predicted integral membrane protein YP_003972609.1 COG0582 Integrase YP_003972611.1 COG5492 Bacterial surface proteins containing Ig-like domains YP_003972623.1 COG1285 Uncharacterized membrane protein YP_003972627.1 COG0726 Predicted xylanase/chitin deacetylase YP_003972631.1 COG3383 Uncharacterized anaerobic dehydrogenase YP_003972632.1 COG2427 Uncharacterized conserved protein YP_003972634.1 COG1051 ADP-ribose pyrophosphatase YP_003972636.1 COG2124 Cytochrome P450 YP_003972637.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_003972638.1 COG0237 Dephospho-CoA kinase YP_003972641.1 COG1587 Uroporphyrinogen-III synthase YP_003972642.1 COG0390 ABC-type uncharacterized transport system, permease component YP_003972643.1 COG1117 ABC-type phosphate transport system, ATPase component YP_003972645.1 COG4297 Uncharacterized protein containing double-stranded beta helix domain YP_003972646.1 COG2427 Uncharacterized conserved protein YP_003972647.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_003972648.1 COG1904 Glucuronate isomerase YP_003972649.1 COG2211 Na+/melibiose symporter and related transporters YP_003972650.1 COG1609 Transcriptional regulators YP_003972651.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_003972652.1 COG2721 Altronate dehydratase YP_003972653.1 COG0730 Predicted permeases YP_003972655.1 COG2318 Uncharacterized protein conserved in bacteria YP_003972656.1 COG0457 FOG: TPR repeat YP_003972659.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_003972661.1 COG4195 Phage-related replication protein YP_003972663.1 COG1396 Predicted transcriptional regulators YP_003972665.1 COG1349 Transcriptional regulators of sugar metabolism YP_003972666.1 COG1484 DNA replication protein YP_003972671.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003972672.1 COG3728 Phage terminase, small subunit YP_003972673.1 COG1783 Phage terminase large subunit YP_003972674.1 COG5518 Bacteriophage capsid portal protein YP_003972686.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_003972687.1 COG1652 Uncharacterized protein containing LysM domain YP_003972690.1 COG0346 Lactoylglutathione lyase and related lyases YP_003972692.1 COG3299 Uncharacterized homolog of phage Mu protein gp47 YP_003972701.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_003972704.1 COG0306 Phosphate/sulphate permeases YP_003972705.1 COG1392 Phosphate transport regulator (distant homolog of PhoU) YP_003972707.1 COG0531 Amino acid transporters YP_003972708.1 COG0346 Lactoylglutathione lyase and related lyases YP_003972709.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_003972710.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003972712.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_003972713.1 COG0345 Pyrroline-5-carboxylate reductase YP_003972714.1 COG2362 D-aminopeptidase YP_003972715.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_003972716.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_003972717.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_003972718.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_003972719.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_003972720.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_003972721.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_003972722.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_003972723.1 COG2706 3-carboxymuconate cyclase YP_003972724.1 COG1834 N-Dimethylarginine dimethylaminohydrolase YP_003972725.1 COG1607 Acyl-CoA hydrolase YP_003972726.1 COG2323 Predicted membrane protein YP_003972727.1 COG1695 Predicted transcriptional regulators YP_003972728.1 COG4858 Uncharacterized membrane-bound protein conserved in bacteria YP_003972729.1 COG3011 Uncharacterized protein conserved in bacteria YP_003972731.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_003972732.1 COG2076 Membrane transporters of cations and cationic drugs YP_003972733.1 COG2076 Membrane transporters of cations and cationic drugs YP_003972734.1 COG0788 Formyltetrahydrofolate hydrolase YP_003972735.1 COG0263 Glutamate 5-kinase YP_003972736.1 COG0014 Gamma-glutamyl phosphate reductase YP_003972737.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_003972738.1 COG1846 Transcriptional regulators YP_003972739.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_003972743.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003972745.1 COG0590 Cytosine/adenosine deaminases YP_003972746.1 COG0406 Fructose-2,6-bisphosphatase YP_003972747.1 COG0620 Methionine synthase II (cobalamin-independent) YP_003972748.1 COG1404 Subtilisin-like serine proteases YP_003972749.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003972750.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters YP_003972751.1 COG1122 ABC-type cobalt transport system, ATPase component YP_003972752.1 COG4721 Predicted membrane protein YP_003972754.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003972755.1 COG0642 Signal transduction histidine kinase YP_003972756.1 COG3212 Predicted membrane protein YP_003972757.1 COG3212 Predicted membrane protein YP_003972760.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_003972761.1 COG0789 Predicted transcriptional regulators YP_003972764.1 COG1846 Transcriptional regulators YP_003972765.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_003972766.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_003972767.1 COG1408 Predicted phosphohydrolases YP_003972768.1 COG1524 Uncharacterized proteins of the AP superfamily YP_003972770.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003972771.1 COG1793 ATP-dependent DNA ligase YP_003972772.1 COG1273 Uncharacterized conserved protein YP_003972773.1 COG2202 FOG: PAS/PAC domain YP_003972775.1 COG3300 MHYT domain (predicted integral membrane sensor domain) YP_003972776.1 COG0586 Uncharacterized membrane-associated protein YP_003972777.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_003972778.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003972782.1 COG0501 Zn-dependent protease with chaperone function YP_003972783.1 COG0168 Trk-type K+ transport systems, membrane components YP_003972784.1 COG2323 Predicted membrane protein YP_003972787.1 COG3594 Fucose 4-O-acetylase and related acetyltransferases YP_003972788.1 COG2202 FOG: PAS/PAC domain YP_003972789.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_003972791.1 COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family YP_003972792.1 COG4857 Predicted kinase YP_003972793.1 COG0388 Predicted amidohydrolase YP_003972794.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_003972795.1 COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit YP_003972796.1 COG4359 Uncharacterized conserved protein, possibly involved in methylthioadenosine recycling YP_003972797.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_003972798.1 COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_003972799.1 COG3339 Uncharacterized conserved protein YP_003972802.1 COG0642 Signal transduction histidine kinase YP_003972803.1 COG1846 Transcriptional regulators YP_003972804.1 COG1360 Flagellar motor protein YP_003972805.1 COG1291 Flagellar motor component YP_003972806.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_003972807.1 COG3949 Uncharacterized membrane protein YP_003972809.1 COG0603 Predicted PP-loop superfamily ATPase YP_003972810.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_003972811.1 COG0602 Organic radical activating enzymes YP_003972812.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_003972813.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003972815.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972816.1 COG4873 Uncharacterized protein conserved in bacteria YP_003972818.1 COG3773 Cell wall hydrolyses involved in spore germination YP_003972819.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_003972820.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_003972821.1 COG2217 Cation transport ATPase YP_003972823.1 COG0006 Xaa-Pro aminopeptidase YP_003972825.1 COG1609 Transcriptional regulators YP_003972826.1 COG3711 Transcriptional antiterminator YP_003972827.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_003972828.1 COG1925 Phosphotransferase system, HPr-related proteins YP_003972829.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_003972831.1 COG1533 DNA repair photolyase YP_003972832.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972833.1 COG0840 Methyl-accepting chemotaxis protein YP_003972834.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003972835.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_003972836.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_003972837.1 COG2202 FOG: PAS/PAC domain YP_003972838.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_003972840.1 COG0835 Chemotaxis signal transduction protein YP_003972842.1 COG0477 Permeases of the major facilitator superfamily YP_003972843.1 COG1376 Uncharacterized protein conserved in bacteria YP_003972844.1 COG1408 Predicted phosphohydrolases YP_003972845.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003972846.1 COG2200 FOG: EAL domain YP_003972847.1 COG3546 Mn-containing catalase YP_003972848.1 COG4703 Uncharacterized protein conserved in bacteria YP_003972849.1 COG1978 Uncharacterized protein conserved in bacteria YP_003972851.1 COG0517 FOG: CBS domain YP_003972852.1 COG0583 Transcriptional regulator YP_003972853.1 COG0716 Flavodoxins YP_003972855.1 COG0716 Flavodoxins YP_003972856.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_003972857.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_003972859.1 COG0668 Small-conductance mechanosensitive channel YP_003972860.1 COG0450 Peroxiredoxin YP_003972861.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_003972864.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_003972865.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_003972866.1 COG0303 Molybdopterin biosynthesis enzyme YP_003972867.1 COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein YP_003972868.1 COG0314 Molybdopterin converting factor, large subunit YP_003972869.1 COG1977 Molybdopterin converting factor, small subunit YP_003972870.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003972871.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003972873.1 COG0845 Membrane-fusion protein YP_003972874.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_003972875.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_003972876.1 COG1349 Transcriptional regulators of sugar metabolism YP_003972877.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) YP_003972878.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_003972879.1 COG0681 Signal peptidase I YP_003972881.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_003972882.1 COG1893 Ketopantoate reductase YP_003972883.1 COG2309 Leucyl aminopeptidase (aminopeptidase T) YP_003972885.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_003972886.1 COG2002 Regulators of stationary/sporulation gene expression YP_003972887.1 COG0642 Signal transduction histidine kinase YP_003972888.1 COG2105 Uncharacterized conserved protein YP_003972889.1 COG0569 K+ transport systems, NAD-binding component YP_003972890.1 COG1001 Adenine deaminase YP_003972891.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_003972892.1 COG5503 Uncharacterized conserved small protein YP_003972893.1 COG0561 Predicted hydrolases of the HAD superfamily YP_003972894.1 COG0242 N-formylmethionyl-tRNA deformylase YP_003972897.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_003972898.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_003972899.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_003972900.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_003972902.1 COG0726 Predicted xylanase/chitin deacetylase YP_003972903.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_003972904.1 COG4476 Uncharacterized protein conserved in bacteria YP_003972905.1 COG4493 Uncharacterized protein conserved in bacteria YP_003972907.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_003972909.1 COG3315 O-Methyltransferase involved in polyketide biosynthesis YP_003972910.1 COG3227 Zinc metalloprotease (elastase) YP_003972913.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003972914.1 COG5660 Predicted integral membrane protein YP_003972917.1 COG1217 Predicted membrane GTPase involved in stress response YP_003972919.1 COG4896 Uncharacterized protein conserved in bacteria YP_003972921.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_003972923.1 COG2066 Glutaminase YP_003972924.1 COG4838 Uncharacterized protein conserved in bacteria YP_003972925.1 COG0772 Bacterial cell division membrane protein YP_003972926.1 COG1038 Pyruvate carboxylase YP_003972927.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_003972928.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_003972929.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_003972930.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_003972931.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_003972932.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_003972933.1 COG3336 Predicted membrane protein YP_003972935.1 COG0517 FOG: CBS domain YP_003972936.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_003972940.1 COG3679 Uncharacterized conserved protein YP_003972941.1 COG4471 Uncharacterized protein conserved in bacteria YP_003972943.1 COG0742 N6-adenine-specific methylase YP_003972944.1 COG0669 Phosphopantetheine adenylyltransferase YP_003972945.1 COG3314 Uncharacterized protein conserved in bacteria YP_003972946.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_003972947.1 COG3480 Predicted secreted protein containing a PDZ domain YP_003972948.1 COG1323 Predicted nucleotidyltransferase YP_003972950.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_003972951.1 COG0333 Ribosomal protein L32 YP_003972953.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003972954.1 COG1893 Ketopantoate reductase YP_003972955.1 COG4365 Uncharacterized protein conserved in bacteria YP_003972956.1 COG2001 Uncharacterized protein conserved in bacteria YP_003972957.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_003972958.1 COG4839 Protein required for the initiation of cell division YP_003972959.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_003972960.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_003972961.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_003972963.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_003972964.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_003972965.1 COG0772 Bacterial cell division membrane protein YP_003972966.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_003972967.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_003972968.1 COG1589 Cell division septal protein YP_003972969.1 COG3879 Uncharacterized protein conserved in bacteria YP_003972970.1 COG3879 Uncharacterized protein conserved in bacteria YP_003972971.1 COG3856 Uncharacterized conserved protein (small basic protein) YP_003972972.1 COG0849 Actin-like ATPase involved in cell division YP_003972973.1 COG0206 Cell division GTPase YP_003972974.1 COG1404 Subtilisin-like serine proteases YP_003972976.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003972977.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003972978.1 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA YP_003972979.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_003972980.1 COG1873 Uncharacterized conserved protein YP_003972981.1 COG1496 Uncharacterized conserved protein YP_003972982.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_003972983.1 COG1799 Uncharacterized protein conserved in bacteria YP_003972984.1 COG0762 Predicted integral membrane protein YP_003972985.1 COG2302 Uncharacterized conserved protein, contains S4-like domain YP_003972986.1 COG3599 Cell division initiation protein YP_003972987.1 COG0060 Isoleucyl-tRNA synthetase YP_003972988.1 COG1734 DnaK suppressor protein YP_003972989.1 COG0597 Lipoprotein signal peptidase YP_003972990.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_003972991.1 COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase YP_003972992.1 COG2233 Xanthine/uracil permeases YP_003972993.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_003972994.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_003972995.1 COG0505 Carbamoylphosphate synthase small subunit YP_003972996.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_003972997.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_003972998.1 COG0167 Dihydroorotate dehydrogenase YP_003972999.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_003973000.1 COG0461 Orotate phosphoribosyltransferase YP_003973001.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_003973002.1 COG0306 Phosphate/sulphate permeases YP_003973003.1 COG2046 ATP sulfurylase (sulfate adenylyltransferase) YP_003973004.1 COG0529 Adenylylsulfate kinase and related kinases YP_003973005.1 COG0007 Uroporphyrinogen-III methylase YP_003973006.1 COG2138 Uncharacterized conserved protein YP_003973007.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_003973008.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_003973009.1 COG0474 Cation transport ATPase YP_003973010.1 COG1561 Uncharacterized stress-induced protein YP_003973011.1 COG2052 Uncharacterized protein conserved in bacteria YP_003973012.1 COG0194 Guanylate kinase YP_003973013.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_003973014.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_003973015.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_003973016.1 COG0242 N-formylmethionyl-tRNA deformylase YP_003973017.1 COG0223 Methionyl-tRNA formyltransferase YP_003973018.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_003973019.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_003973020.1 COG0631 Serine/threonine protein phosphatase YP_003973021.1 COG0515 Serine/threonine protein kinase YP_003973022.1 COG1162 Predicted GTPases YP_003973023.1 COG0036 Pentose-5-phosphate-3-epimerase YP_003973024.1 COG1564 Thiamine pyrophosphokinase YP_003973026.1 COG0227 Ribosomal protein L28 YP_003973027.1 COG1302 Uncharacterized protein conserved in bacteria YP_003973028.1 COG1461 Predicted kinase related to dihydroxyacetone kinase YP_003973029.1 COG1760 L-serine deaminase YP_003973030.1 COG1760 L-serine deaminase YP_003973031.1 COG1200 RecG-like helicase YP_003973032.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_003973033.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_003973034.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_003973035.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003973036.1 COG0236 Acyl carrier protein YP_003973037.1 COG0571 dsRNA-specific ribonuclease YP_003973038.1 COG1196 Chromosome segregation ATPases YP_003973039.1 COG0552 Signal recognition particle GTPase YP_003973040.1 COG2739 Uncharacterized protein conserved in bacteria YP_003973041.1 COG0541 Signal recognition particle GTPase YP_003973042.1 COG0228 Ribosomal protein S16 YP_003973043.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_003973045.1 COG0806 RimM protein, required for 16S rRNA processing YP_003973046.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_003973047.1 COG0335 Ribosomal protein L19 YP_003973049.1 COG1161 Predicted GTPases YP_003973050.1 COG0164 Ribonuclease HII YP_003973052.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_003973053.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_003973054.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_003973055.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_003973056.1 COG0550 Topoisomerase IA YP_003973057.1 COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation YP_003973058.1 COG4974 Site-specific recombinase XerD YP_003973059.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_003973060.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_003973061.1 COG4465 Pleiotropic transcriptional repressor YP_003973062.1 COG1815 Flagellar basal body protein YP_003973063.1 COG1558 Flagellar basal body rod protein YP_003973064.1 COG1677 Flagellar hook-basal body protein YP_003973065.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_003973066.1 COG1536 Flagellar motor switch protein YP_003973067.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_003973068.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_003973069.1 COG2882 Flagellar biosynthesis chaperone YP_003973070.1 COG3334 Uncharacterized conserved protein YP_003973071.1 COG3144 Flagellar hook-length control protein YP_003973072.1 COG1843 Flagellar hook capping protein YP_003973073.1 COG4786 Flagellar basal body rod protein YP_003973074.1 COG1582 Uncharacterized protein, possibly involved in motility YP_003973075.1 COG1580 Flagellar basal body-associated protein YP_003973076.1 COG1868 Flagellar motor switch protein YP_003973077.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_003973078.1 COG0784 FOG: CheY-like receiver YP_003973080.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_003973081.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_003973082.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_003973083.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_003973084.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_003973085.1 COG1419 Flagellar GTP-binding protein YP_003973086.1 COG0455 ATPases involved in chromosome partitioning YP_003973087.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_003973088.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_003973089.1 COG0835 Chemotaxis signal transduction protein YP_003973090.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_003973091.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_003973092.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003973094.1 COG0052 Ribosomal protein S2 YP_003973095.1 COG0264 Translation elongation factor Ts YP_003973096.1 COG0528 Uridylate kinase YP_003973097.1 COG0233 Ribosome recycling factor YP_003973098.1 COG0020 Undecaprenyl pyrophosphate synthase YP_003973099.1 COG0575 CDP-diglyceride synthetase YP_003973100.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003973101.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_003973102.1 COG0442 Prolyl-tRNA synthetase YP_003973103.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_003973105.1 COG0779 Uncharacterized protein conserved in bacteria YP_003973106.1 COG0195 Transcription elongation factor YP_003973107.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_003973108.1 COG1358 Ribosomal protein HS6-type (S12/L30/L7a) YP_003973109.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_003973110.1 COG1550 Uncharacterized protein conserved in bacteria YP_003973111.1 COG0858 Ribosome-binding factor A YP_003973112.1 COG0130 Pseudouridine synthase YP_003973113.1 COG0196 FAD synthase YP_003973114.1 COG0184 Ribosomal protein S15P/S13E YP_003973115.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_003973116.1 COG0726 Predicted xylanase/chitin deacetylase YP_003973117.1 COG0612 Predicted Zn-dependent peptidases YP_003973118.1 COG1873 Uncharacterized conserved protein YP_003973119.1 COG1064 Zn-dependent alcohol dehydrogenases YP_003973120.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_003973121.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_003973122.1 COG0527 Aspartokinases YP_003973123.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_003973124.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_003973125.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_003973127.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_003973128.1 COG2188 Transcriptional regulators YP_003973129.1 COG0477 Permeases of the major facilitator superfamily YP_003973131.1 COG0612 Predicted Zn-dependent peptidases YP_003973132.1 COG0612 Predicted Zn-dependent peptidases YP_003973133.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003973136.1 COG1426 Uncharacterized protein conserved in bacteria YP_003973137.1 COG0558 Phosphatidylglycerophosphate synthase YP_003973138.1 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA YP_003973139.1 COG0468 RecA/RadA recombinase YP_003973140.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_003973141.1 COG1418 Predicted HD superfamily hydrolase YP_003973142.1 COG1692 Uncharacterized protein conserved in bacteria YP_003973143.1 COG2359 Uncharacterized protein conserved in bacteria YP_003973144.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_003973145.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_003973146.1 COG4845 Chloramphenicol O-acetyltransferase YP_003973147.1 COG0621 2-methylthioadenine synthetase YP_003973148.1 COG4550 Predicted membrane protein YP_003973150.1 COG0249 Mismatch repair ATPase (MutS family) YP_003973151.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_003973154.1 COG1309 Transcriptional regulator YP_003973155.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003973156.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_003973157.1 COG3321 Polyketide synthase modules and related proteins YP_003973158.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_003973159.1 COG0236 Acyl carrier protein YP_003973160.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_003973161.1 COG3425 3-hydroxy-3-methylglutaryl CoA synthase YP_003973162.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_003973163.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_003973164.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_003973165.1 COG3321 Polyketide synthase modules and related proteins YP_003973166.1 COG3321 Polyketide synthase modules and related proteins YP_003973167.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973168.1 COG3321 Polyketide synthase modules and related proteins YP_003973169.1 COG2124 Cytochrome P450 YP_003973171.1 COG1404 Subtilisin-like serine proteases YP_003973173.1 COG4195 Phage-related replication protein YP_003973174.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_003973175.1 COG2076 Membrane transporters of cations and cationic drugs YP_003973176.1 COG2076 Membrane transporters of cations and cationic drugs YP_003973177.1 COG1309 Transcriptional regulator YP_003973180.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_003973181.1 COG1923 Uncharacterized host factor I protein YP_003973184.1 COG1780 Protein involved in ribonucleotide reduction YP_003973185.1 COG0209 Ribonucleotide reductase, alpha subunit YP_003973186.1 COG0208 Ribonucleotide reductase, beta subunit YP_003973187.1 COG4112 Predicted phosphoesterase (MutT family) YP_003973188.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_003973189.1 COG0464 ATPases of the AAA+ class YP_003973190.1 COG2262 GTPases YP_003973191.1 COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance YP_003973192.1 COG0789 Predicted transcriptional regulators YP_003973193.1 COG0174 Glutamine synthetase YP_003973194.1 COG0582 Integrase YP_003973196.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003973202.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_003973204.1 COG1757 Na+/H+ antiporter YP_003973206.1 COG0346 Lactoylglutathione lyase and related lyases YP_003973207.1 COG5294 Uncharacterized protein conserved in bacteria YP_003973209.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003973210.1 COG2273 Beta-glucanase/Beta-glucan synthetase YP_003973212.1 COG1048 Aconitase A YP_003973215.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003973217.1 COG0657 Esterase/lipase YP_003973219.1 COG1011 Predicted hydrolase (HAD superfamily) YP_003973220.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_003973224.1 COG2318 Uncharacterized protein conserved in bacteria YP_003973225.1 COG2367 Beta-lactamase class A YP_003973226.1 COG4641 Uncharacterized protein conserved in bacteria YP_003973227.1 COG1388 FOG: LysM repeat YP_003973228.1 COG3858 Predicted glycosyl hydrolase YP_003973229.1 COG2720 Uncharacterized vancomycin resistance protein YP_003973230.1 COG0662 Mannose-6-phosphate isomerase YP_003973232.1 COG1145 Ferredoxin YP_003973237.1 COG0477 Permeases of the major facilitator superfamily YP_003973239.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003973240.1 COG0789 Predicted transcriptional regulators YP_003973241.1 COG2030 Acyl dehydratase YP_003973244.1 COG2135 Uncharacterized conserved protein YP_003973246.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003973248.1 COG0457 FOG: TPR repeat YP_003973249.1 COG3279 Response regulator of the LytR/AlgR family YP_003973251.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003973252.1 COG0842 ABC-type multidrug transport system, permease component YP_003973259.1 COG0642 Signal transduction histidine kinase YP_003973262.1 COG4195 Phage-related replication protein YP_003973263.1 COG3619 Predicted membrane protein YP_003973267.1 COG4195 Phage-related replication protein YP_003973269.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_003973272.1 COG5577 Spore coat protein YP_003973274.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_003973275.1 COG1388 FOG: LysM repeat YP_003973276.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_003973277.1 COG4224 Uncharacterized protein conserved in bacteria YP_003973278.1 COG0021 Transketolase YP_003973280.1 COG3763 Uncharacterized protein conserved in bacteria YP_003973282.1 COG0785 Cytochrome c biogenesis protein YP_003973283.1 COG0784 FOG: CheY-like receiver YP_003973284.1 COG4846 Membrane protein involved in cytochrome C biogenesis YP_003973286.1 COG0071 Molecular chaperone (small heat shock protein) YP_003973289.1 COG1048 Aconitase A YP_003973290.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_003973294.1 COG0824 Predicted thioesterase YP_003973296.1 COG4841 Uncharacterized protein conserved in bacteria YP_003973297.1 COG0344 Predicted membrane protein YP_003973298.1 COG1832 Predicted CoA-binding protein YP_003973299.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_003973300.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_003973303.1 COG1115 Na+/alanine symporter YP_003973304.1 COG4188 Predicted dienelactone hydrolase YP_003973305.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003973306.1 COG5520 O-Glycosyl hydrolase YP_003973308.1 COG2246 Predicted membrane protein YP_003973310.1 COG0586 Uncharacterized membrane-associated protein YP_003973311.1 COG2404 Predicted phosphohydrolase (DHH superfamily) YP_003973312.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_003973313.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_003973314.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_003973315.1 COG0511 Biotin carboxyl carrier protein YP_003973316.1 COG0439 Biotin carboxylase YP_003973317.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_003973318.1 COG1960 Acyl-CoA dehydrogenases YP_003973319.1 COG1649 Uncharacterized protein conserved in bacteria YP_003973320.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_003973321.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973322.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973323.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973324.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973325.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973326.1 COG1017 Hemoglobin-like flavoprotein YP_003973327.1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) YP_003973328.1 COG2017 Galactose mutarotase and related enzymes YP_003973330.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_003973331.1 COG3708 Uncharacterized protein conserved in bacteria YP_003973334.1 COG0457 FOG: TPR repeat YP_003973336.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_003973337.1 COG0582 Integrase YP_003973338.1 COG0582 Integrase YP_003973340.1 COG0405 Gamma-glutamyltransferase YP_003973341.1 COG0583 Transcriptional regulator YP_003973342.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_003973343.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_003973344.1 COG0067 Glutamate synthase domain 1 YP_003973345.1 COG0583 Transcriptional regulator YP_003973346.1 COG0263 Glutamate 5-kinase YP_003973347.1 COG0345 Pyrroline-5-carboxylate reductase YP_003973349.1 COG0644 Dehydrogenases (flavoproteins) YP_003973350.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973351.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973352.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003973353.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_003973358.1 COG3331 Penicillin-binding protein-related factor A, putative recombinase YP_003973360.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_003973361.1 COG0498 Threonine synthase YP_003973362.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_003973363.1 COG2964 Uncharacterized protein conserved in bacteria YP_003973365.1 COG0520 Selenocysteine lyase YP_003973369.1 COG0756 dUTPase YP_003973373.1 COG0358 DNA primase (bacterial type) YP_003973374.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_003973375.1 COG2378 Predicted transcriptional regulator YP_003973376.1 COG0693 Putative intracellular protease/amidase YP_003973385.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_003973399.1 COG4508 Uncharacterized protein conserved in bacteria YP_003973405.1 COG3655 Predicted transcriptional regulator YP_003973408.1 COG0582 Integrase YP_003973417.1 COG4815 Uncharacterized protein conserved in bacteria YP_003973418.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003973429.1 COG0210 Superfamily I DNA and RNA helicases YP_003973437.1 COG1396 Predicted transcriptional regulators YP_003973440.1 COG1089 GDP-D-mannose dehydratase YP_003973441.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_003973442.1 COG0776 Bacterial nucleoid DNA-binding protein YP_003973465.1 COG0457 FOG: TPR repeat YP_003973472.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_003973479.1 COG0840 Methyl-accepting chemotaxis protein YP_003973481.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_003973482.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003973483.1 COG0642 Signal transduction histidine kinase YP_003973484.1 COG5294 Uncharacterized protein conserved in bacteria YP_003973491.1 COG0693 Putative intracellular protease/amidase YP_003973493.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003973495.1 COG2318 Uncharacterized protein conserved in bacteria YP_003973496.1 COG0477 Permeases of the major facilitator superfamily YP_003973497.1 COG1070 Sugar (pentulose and hexulose) kinases YP_003973498.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_003973499.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_003973502.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003973503.1 COG1309 Transcriptional regulator YP_003973504.1 COG0073 EMAP domain YP_003973505.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_003973507.1 COG1309 Transcriptional regulator YP_003973508.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003973509.1 COG3708 Uncharacterized protein conserved in bacteria YP_003973510.1 COG2378 Predicted transcriptional regulator YP_003973512.1 COG0640 Predicted transcriptional regulators YP_003973513.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003973514.1 COG2322 Predicted membrane protein YP_003973516.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003973517.1 COG3239 Fatty acid desaturase YP_003973518.1 COG4585 Signal transduction histidine kinase YP_003973519.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_003973521.1 COG1388 FOG: LysM repeat YP_003973523.1 COG0514 Superfamily II DNA helicase YP_003973524.1 COG1182 Acyl carrier protein phosphodiesterase YP_003973525.1 COG1734 DnaK suppressor protein YP_003973529.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003973530.1 COG1657 Squalene cyclase YP_003973531.1 COG0605 Superoxide dismutase YP_003973532.1 COG0733 Na+-dependent transporters of the SNF family YP_003973533.1 COG0385 Predicted Na+-dependent transporter YP_003973534.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_003973535.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_003973536.1 COG4548 Nitric oxide reductase activation protein YP_003973537.1 COG0714 MoxR-like ATPases YP_003973538.1 COG2032 Cu/Zn superoxide dismutase YP_003973539.1 COG1388 FOG: LysM repeat YP_003973540.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_003973541.1 COG1624 Uncharacterized conserved protein YP_003973543.1 COG0534 Na+-driven multidrug efflux pump YP_003973544.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003973545.1 COG2120 Uncharacterized proteins, LmbE homologs YP_003973548.1 COG2962 Predicted permeases YP_003973549.1 COG0071 Molecular chaperone (small heat shock protein) YP_003973551.1 COG2610 H+/gluconate symporter and related permeases YP_003973552.1 COG2318 Uncharacterized protein conserved in bacteria YP_003973553.1 COG2610 H+/gluconate symporter and related permeases YP_003973554.1 COG2610 H+/gluconate symporter and related permeases YP_003973555.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_003973556.1 COG1733 Predicted transcriptional regulators YP_003973557.1 COG0778 Nitroreductase YP_003973558.1 COG0400 Predicted esterase YP_003973559.1 COG0346 Lactoylglutathione lyase and related lyases YP_003973561.1 COG0591 Na+/proline symporter YP_003973562.1 COG0793 Periplasmic protease YP_003973563.1 COG0500 SAM-dependent methyltransferases YP_003973565.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_003973566.1 COG0813 Purine-nucleoside phosphorylase YP_003973570.1 COG0671 Membrane-associated phospholipid phosphatase YP_003973575.1 COG4479 Uncharacterized protein conserved in bacteria YP_003973576.1 COG2217 Cation transport ATPase YP_003973577.1 COG1509 Lysine 2,3-aminomutase YP_003973579.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_003973580.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_003973581.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_003973582.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_003973585.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003973586.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003973589.1 COG4641 Uncharacterized protein conserved in bacteria YP_003973590.1 COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_003973592.1 COG0787 Alanine racemase YP_003973593.1 COG0366 Glycosidases YP_003973594.1 COG3397 Uncharacterized protein conserved in bacteria YP_003973595.1 COG0040 ATP phosphoribosyltransferase YP_003973596.1 COG3655 Predicted transcriptional regulator YP_003973597.1 COG3739 Uncharacterized integral membrane protein YP_003973598.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_003973599.1 COG0209 Ribonucleotide reductase, alpha subunit YP_003973602.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_003973603.1 COG0225 Peptide methionine sulfoxide reductase YP_003973604.1 COG1846 Transcriptional regulators YP_003973605.1 COG0534 Na+-driven multidrug efflux pump YP_003973607.1 COG4698 Uncharacterized protein conserved in bacteria YP_003973608.1 COG2755 Lysophospholipase L1 and related esterases YP_003973609.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_003973611.1 COG1171 Threonine dehydratase YP_003973612.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_003973613.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_003973614.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003973615.1 COG0262 Dihydrofolate reductase YP_003973616.1 COG0207 Thymidylate synthase YP_003973617.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_003973619.1 COG0500 SAM-dependent methyltransferases YP_003973621.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_003973622.1 COG0694 Thioredoxin-like proteins and domains YP_003973623.1 COG1418 Predicted HD superfamily hydrolase YP_003973624.1 COG0386 Glutathione peroxidase YP_003973625.1 COG1897 Homoserine trans-succinylase YP_003973626.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_003973627.1 COG1278 Cold shock proteins YP_003973631.1 COG0328 Ribonuclease HI YP_003973632.1 COG1738 Uncharacterized conserved protein YP_003973633.1 COG0328 Ribonuclease HI YP_003973635.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_003973638.1 COG0699 Predicted GTPases (dynamin-related) YP_003973639.1 COG1755 Uncharacterized protein conserved in bacteria YP_003973640.1 COG3424 Predicted naringenin-chalcone synthase YP_003973641.1 COG2233 Xanthine/uracil permeases YP_003973642.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_003973643.1 COG2317 Zn-dependent carboxypeptidase YP_003973645.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_003973646.1 COG0524 Sugar kinases, ribokinase family YP_003973647.1 COG1609 Transcriptional regulators YP_003973648.1 COG3717 5-keto 4-deoxyuronate isomerase YP_003973649.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003973650.1 COG1199 Rad3-related DNA helicases YP_003973652.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_003973653.1 COG3599 Cell division initiation protein YP_003973654.1 COG4474 Uncharacterized protein conserved in bacteria YP_003973657.1 COG3359 Predicted exonuclease YP_003973658.1 COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster YP_003973659.1 COG2190 Phosphotransferase system IIA components YP_003973667.1 COG3331 Penicillin-binding protein-related factor A, putative recombinase YP_003973668.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_003973670.1 COG0177 Predicted EndoIII-related endonuclease YP_003973671.1 COG3935 Putative primosome component and related proteins YP_003973672.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_003973673.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_003973674.1 COG5353 Uncharacterized protein conserved in bacteria YP_003973677.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_003973678.1 COG0853 Aspartate 1-decarboxylase YP_003973679.1 COG0414 Panthothenate synthetase YP_003973680.1 COG0413 Ketopantoate hydroxymethyltransferase YP_003973681.1 COG1654 Biotin operon repressor YP_003973682.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_003973683.1 COG0438 Glycosyltransferase YP_003973684.1 COG2120 Uncharacterized proteins, LmbE homologs YP_003973685.1 COG1803 Methylglyoxal synthase YP_003973686.1 COG0289 Dihydrodipicolinate reductase YP_003973687.1 COG1694 Predicted pyrophosphatase YP_003973688.1 COG1284 Uncharacterized conserved protein YP_003973689.1 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes YP_003973691.1 COG4347 Predicted membrane protein YP_003973692.1 COG1290 Cytochrome b subunit of the bc complex YP_003973693.1 COG1290 Cytochrome b subunit of the bc complex YP_003973694.1 COG0723 Rieske Fe-S protein YP_003973696.1 COG5582 Uncharacterized conserved protein YP_003973697.1 COG0457 FOG: TPR repeat YP_003973698.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_003973699.1 COG0287 Prephenate dehydrogenase YP_003973700.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_003973701.1 COG0159 Tryptophan synthase alpha chain YP_003973702.1 COG0133 Tryptophan synthase beta chain YP_003973703.1 COG0135 Phosphoribosylanthranilate isomerase YP_003973704.1 COG0134 Indole-3-glycerol phosphate synthase YP_003973705.1 COG0547 Anthranilate phosphoribosyltransferase YP_003973706.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_003973707.1 COG4401 Chorismate mutase YP_003973708.1 COG0337 3-dehydroquinate synthetase YP_003973709.1 COG0082 Chorismate synthase YP_003973710.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_003973711.1 COG0105 Nucleoside diphosphate kinase YP_003973712.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_003973713.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_003973715.1 COG3468 Type V secretory pathway, adhesin AidA YP_003973716.1 COG0302 GTP cyclohydrolase I YP_003973717.1 COG0776 Bacterial nucleoid DNA-binding protein YP_003973721.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_003973722.1 COG1160 Predicted GTPases YP_003973727.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_003973728.1 COG0539 Ribosomal protein S1 YP_003973729.1 COG0283 Cytidylate kinase YP_003973731.1 COG5581 Predicted glycosyltransferase YP_003973733.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_003973734.1 COG2339 Predicted membrane protein YP_003973735.1 COG0492 Thioredoxin reductase YP_003973736.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_003973737.1 COG4862 Negative regulator of genetic competence, sporulation and motility YP_003973738.1 COG1408 Predicted phosphohydrolases YP_003973740.1 COG1652 Uncharacterized protein containing LysM domain YP_003973741.1 COG1266 Predicted metal-dependent membrane protease YP_003973742.1 COG0514 Superfamily II DNA helicase YP_003973743.1 COG4955 Uncharacterized protein conserved in bacteria YP_003973744.1 COG1141 Ferredoxin YP_003973745.1 COG3601 Predicted membrane protein YP_003973747.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_003973748.1 COG0710 3-dehydroquinate dehydratase YP_003973750.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003973751.1 COG0642 Signal transduction histidine kinase YP_003973752.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003973753.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_003973754.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_003973755.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_003973756.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_003973757.1 COG0700 Uncharacterized membrane protein YP_003973758.1 COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. YP_003973759.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_003973761.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_003973762.1 COG1354 Uncharacterized conserved protein YP_003973763.1 COG1547 Uncharacterized conserved protein YP_003973764.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003973765.1 COG0054 Riboflavin synthase beta-chain YP_003973766.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_003973767.1 COG0307 Riboflavin synthase alpha chain YP_003973768.1 COG0117 Pyrimidine deaminase YP_003973771.1 COG0681 Signal peptidase I YP_003973772.1 COG3478 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain YP_003973773.1 COG1278 Cold shock proteins YP_003973779.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_003973781.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_003973783.1 COG3613 Nucleoside 2-deoxyribosyltransferase YP_003973787.1 COG0322 Nuclease subunit of the excinuclease complex YP_003973788.1 COG3584 Uncharacterized protein conserved in bacteria YP_003973791.1 COG0237 Dephospho-CoA kinase YP_003973792.1 COG1396 Predicted transcriptional regulators YP_003973793.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_003973798.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_003973801.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_003973803.1 COG4095 Uncharacterized conserved protein YP_003973804.1 COG1428 Deoxynucleoside kinases YP_003973806.1 COG1435 Thymidine kinase YP_003973807.1 COG1423 ATP-dependent DNA ligase, homolog of eukaryotic ligase III YP_003973809.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_003973812.1 COG0673 Predicted dehydrogenases and related proteins YP_003973814.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003973815.1 COG0358 DNA primase (bacterial type) YP_003973817.1 COG0305 Replicative DNA helicase YP_003973818.1 COG1484 DNA replication protein YP_003973820.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_003973821.1 COG4824 Phage-related holin (Lysis protein) YP_003973824.1 COG4722 Phage-related protein YP_003973825.1 COG5280 Phage-related minor tail protein YP_003973828.1 COG5437 Predicted secreted protein YP_003973838.1 COG5362 Phage-related terminase YP_003973839.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_003973842.1 COG3845 ABC-type uncharacterized transport systems, ATPase components YP_003973850.1 COG0457 FOG: TPR repeat YP_003973852.1 COG1598 Uncharacterized conserved protein YP_003973853.1 COG1724 Predicted periplasmic or secreted lipoprotein YP_003973855.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_003973856.1 COG4086 Predicted secreted protein YP_003973857.1 COG0019 Diaminopimelate decarboxylase YP_003973861.1 COG0183 Acetyl-CoA acetyltransferase YP_003973865.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003973866.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_003973867.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003973868.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_003973869.1 COG0005 Purine nucleoside phosphorylase YP_003973870.1 COG1015 Phosphopentomutase YP_003973871.1 COG4974 Site-specific recombinase XerD YP_003973873.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_003973874.1 COG1300 Uncharacterized membrane protein YP_003973875.1 COG0536 Predicted GTPase YP_003973876.1 COG0281 Malic enzyme YP_003973877.1 COG1757 Na+/H+ antiporter YP_003973878.1 COG1027 Aspartate ammonia-lyase YP_003973879.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_003973880.1 COG1396 Predicted transcriptional regulators YP_003973881.1 COG1379 Uncharacterized conserved protein YP_003973882.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_003973884.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_003973886.1 COG1073 Hydrolases of the alpha/beta superfamily YP_003973888.1 COG4918 Uncharacterized protein conserved in bacteria YP_003973889.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003973890.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_003973891.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003973893.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003973895.1 COG0628 Predicted permease YP_003973898.1 COG0346 Lactoylglutathione lyase and related lyases YP_003973899.1 COG1072 Panthothenate kinase YP_003973900.1 COG3048 D-serine dehydratase YP_003973901.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_003973902.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003973903.1 COG0345 Pyrroline-5-carboxylate reductase YP_003973904.1 COG4187 Arginine degradation protein (predicted deacylase) YP_003973905.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_003973906.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003973907.1 COG0267 Ribosomal protein L33 YP_003973908.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_003973909.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_003973910.1 COG0362 6-phosphogluconate dehydrogenase YP_003973911.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003973913.1 COG0706 Preprotein translocase subunit YidC YP_003973914.1 COG3361 Uncharacterized conserved protein YP_003973915.1 COG2195 Di- and tripeptidases YP_003973916.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_003973917.1 COG0346 Lactoylglutathione lyase and related lyases YP_003973918.1 COG1376 Uncharacterized protein conserved in bacteria YP_003973919.1 COG4129 Predicted membrane protein YP_003973920.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_003973921.1 COG0765 ABC-type amino acid transport system, permease component YP_003973922.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_003973924.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_003973926.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_003973927.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_003973928.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_003973929.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_003973930.1 COG3426 Butyrate kinase YP_003973931.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_003973932.1 COG0280 Phosphotransacetylase YP_003973933.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_003973935.1 COG2513 PEP phosphonomutase and related enzymes YP_003973936.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_003973937.1 COG0372 Citrate synthase YP_003973938.1 COG1960 Acyl-CoA dehydrogenases YP_003973939.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_003973940.1 COG0183 Acetyl-CoA acetyltransferase YP_003973941.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_003973942.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_003973944.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_003973945.1 COG3546 Mn-containing catalase YP_003973946.1 COG0784 FOG: CheY-like receiver YP_003973947.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_003973948.1 COG0497 ATPase involved in DNA repair YP_003973949.1 COG1438 Arginine repressor YP_003973950.1 COG1189 Predicted rRNA methylase YP_003973951.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_003973952.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_003973953.1 COG1722 Exonuclease VII small subunit YP_003973954.1 COG1570 Exonuclease VII, large subunit YP_003973955.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_003973956.1 COG0781 Transcription termination factor YP_003973958.1 COG1302 Uncharacterized protein conserved in bacteria YP_003973959.1 COG0439 Biotin carboxylase YP_003973960.1 COG0511 Biotin carboxyl carrier protein YP_003973968.1 COG3854 Uncharacterized protein conserved in bacteria YP_003973970.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_003973971.1 COG0006 Xaa-Pro aminopeptidase YP_003973972.1 COG0757 3-dehydroquinate dehydratase II YP_003973974.1 COG3872 Predicted metal-dependent enzyme YP_003973975.1 COG0029 Aspartate oxidase YP_003973976.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_003973977.1 COG1321 Mn-dependent transcriptional regulator YP_003973978.1 COG0095 Lipoate-protein ligase A YP_003973979.1 COG0607 Rhodanese-related sulfurtransferase YP_003973980.1 COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain YP_003973981.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_003973982.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_003973983.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_003973985.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_003973986.1 COG1396 Predicted transcriptional regulators YP_003973988.1 COG0681 Signal peptidase I YP_003973993.1 COG4940 Competence protein ComGF YP_003973996.1 COG4537 Competence protein ComGC YP_003973997.1 COG1459 Type II secretory pathway, component PulF YP_003973998.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_003973999.1 COG0598 Mg2+ and Co2+ transporters YP_003974000.1 COG1253 Hemolysins and related proteins containing CBS domains YP_003974001.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003974002.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_003974004.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003974006.1 COG0011 Uncharacterized conserved protein YP_003974007.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_003974008.1 COG2866 Predicted carboxypeptidase YP_003974009.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_003974010.1 COG1940 Transcriptional regulator/sugar kinase YP_003974011.1 COG4483 Uncharacterized protein conserved in bacteria YP_003974012.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_003974014.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_003974015.1 COG0267 Ribosomal protein L33 YP_003974016.1 COG0438 Glycosyltransferase YP_003974020.1 COG1117 ABC-type phosphate transport system, ATPase component YP_003974021.1 COG1117 ABC-type phosphate transport system, ATPase component YP_003974022.1 COG0581 ABC-type phosphate transport system, permease component YP_003974023.1 COG0573 ABC-type phosphate transport system, permease component YP_003974024.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_003974025.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_003974026.1 COG0477 Permeases of the major facilitator superfamily YP_003974027.1 COG0605 Superoxide dismutase YP_003974028.1 COG2839 Uncharacterized protein conserved in bacteria YP_003974030.1 COG0739 Membrane proteins related to metalloendopeptidases YP_003974031.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_003974032.1 COG0841 Cation/multidrug efflux pump YP_003974033.1 COG5663 Uncharacterized conserved protein YP_003974034.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_003974035.1 COG1284 Uncharacterized conserved protein YP_003974037.1 COG0648 Endonuclease IV YP_003974038.1 COG0513 Superfamily II DNA and RNA helicases YP_003974040.1 COG0761 Penicillin tolerance protein YP_003974041.1 COG0327 Uncharacterized conserved protein YP_003974042.1 COG2384 Predicted SAM-dependent methyltransferase YP_003974043.1 COG2010 Cytochrome c, mono- and diheme variants YP_003974044.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_003974045.1 COG0358 DNA primase (bacterial type) YP_003974046.1 COG1671 Uncharacterized protein conserved in bacteria YP_003974047.1 COG1806 Uncharacterized protein conserved in bacteria YP_003974048.1 COG0517 FOG: CBS domain YP_003974049.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_003974050.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_003974051.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_003974053.1 COG1159 GTPase YP_003974054.1 COG0295 Cytidine deaminase YP_003974055.1 COG0818 Diacylglycerol kinase YP_003974056.1 COG0319 Predicted metal-dependent hydrolase YP_003974057.1 COG1480 Predicted membrane-associated HD superfamily hydrolase YP_003974058.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_003974062.1 COG4864 Uncharacterized protein conserved in bacteria YP_003974063.1 COG1030 Membrane-bound serine protease (ClpP class) YP_003974064.1 COG1610 Uncharacterized conserved protein YP_003974065.1 COG0828 Ribosomal protein S21 YP_003974066.1 COG1283 Na+/phosphate symporter YP_003974067.1 COG0621 2-methylthioadenine synthetase YP_003974068.1 COG1385 Uncharacterized protein conserved in bacteria YP_003974069.1 COG2264 Ribosomal protein L11 methylase YP_003974070.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_003974071.1 COG0443 Molecular chaperone YP_003974072.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_003974073.1 COG1420 Transcriptional regulator of heat shock gene YP_003974074.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_003974075.1 COG0481 Membrane GTPase LepA YP_003974079.1 COG0268 Ribosomal protein S20 YP_003974080.1 COG1466 DNA polymerase III, delta subunit YP_003974083.1 COG0658 Predicted membrane metal-binding protein YP_003974084.1 COG2131 Deoxycytidylate deaminase YP_003974085.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_003974086.1 COG0345 Pyrroline-5-carboxylate reductase YP_003974087.1 COG0500 SAM-dependent methyltransferases YP_003974088.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_003974089.1 COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism YP_003974090.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_003974091.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_003974092.1 COG0169 Shikimate 5-dehydrogenase YP_003974093.1 COG1161 Predicted GTPases YP_003974094.1 COG2179 Predicted hydrolase of the HAD superfamily YP_003974096.1 COG2755 Lysophospholipase L1 and related esterases YP_003974097.1 COG0726 Predicted xylanase/chitin deacetylase YP_003974098.1 COG1720 Uncharacterized conserved protein YP_003974099.1 COG0398 Uncharacterized conserved protein YP_003974100.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003974104.1 COG2732 Barstar, RNAse (barnase) inhibitor YP_003974107.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003974108.1 COG1725 Predicted transcriptional regulators YP_003974110.1 COG0583 Transcriptional regulator YP_003974111.1 COG4689 Acetoacetate decarboxylase YP_003974112.1 COG1893 Ketopantoate reductase YP_003974114.1 COG0477 Permeases of the major facilitator superfamily YP_003974116.1 COG0583 Transcriptional regulator YP_003974117.1 COG0477 Permeases of the major facilitator superfamily YP_003974118.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_003974119.1 COG2124 Cytochrome P450 YP_003974120.1 COG1309 Transcriptional regulator YP_003974121.1 COG0500 SAM-dependent methyltransferases YP_003974125.1 COG2116 Formate/nitrite family of transporters YP_003974126.1 COG5609 Uncharacterized conserved protein YP_003974127.1 COG3383 Uncharacterized anaerobic dehydrogenase YP_003974128.1 COG2427 Uncharacterized conserved protein YP_003974130.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_003974131.1 COG0031 Cysteine synthase YP_003974132.1 COG0775 Nucleoside phosphorylase YP_003974133.1 COG0500 SAM-dependent methyltransferases YP_003974136.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_003974137.1 COG0782 Transcription elongation factor YP_003974138.1 COG0572 Uridine kinase YP_003974139.1 COG0826 Collagenase and related proteases YP_003974140.1 COG0826 Collagenase and related proteases YP_003974141.1 COG4122 Predicted O-methyltransferase YP_003974142.1 COG1559 Predicted periplasmic solute-binding protein YP_003974143.1 COG3906 Uncharacterized protein conserved in bacteria YP_003974144.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_003974145.1 COG4472 Uncharacterized protein conserved in bacteria YP_003974146.1 COG0013 Alanyl-tRNA synthetase YP_003974147.1 COG0628 Predicted permease YP_003974148.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_003974149.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_003974150.1 COG0765 ABC-type amino acid transport system, permease component YP_003974151.1 COG0765 ABC-type amino acid transport system, permease component YP_003974154.1 COG3881 Uncharacterized protein conserved in bacteria YP_003974155.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_003974156.1 COG0457 FOG: TPR repeat YP_003974157.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_003974158.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_003974159.1 COG1959 Predicted transcriptional regulator YP_003974160.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_003974161.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_003974163.1 COG0173 Aspartyl-tRNA synthetase YP_003974164.1 COG0124 Histidyl-tRNA synthetase YP_003974166.1 COG3103 SH3 domain protein YP_003974167.1 COG1490 D-Tyr-tRNAtyr deacylase YP_003974168.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_003974169.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_003974170.1 COG0608 Single-stranded DNA-specific exonuclease YP_003974171.1 COG5416 Uncharacterized integral membrane protein YP_003974172.1 COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels YP_003974173.1 COG0342 Preprotein translocase subunit SecD YP_003974175.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_003974176.1 COG2323 Predicted membrane protein YP_003974178.1 COG1862 Preprotein translocase subunit YajC YP_003974179.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_003974180.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_003974182.1 COG2255 Holliday junction resolvasome, helicase subunit YP_003974183.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_003974185.1 COG0477 Permeases of the major facilitator superfamily YP_003974186.1 COG0515 Serine/threonine protein kinase YP_003974189.1 COG0217 Uncharacterized conserved protein YP_003974190.1 COG3325 Chitinase YP_003974191.1 COG3325 Chitinase YP_003974192.1 COG3394 Uncharacterized protein conserved in bacteria YP_003974193.1 COG2188 Transcriptional regulators YP_003974194.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_003974195.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_003974196.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_003974197.1 COG1440 Phosphotransferase system cellobiose-specific component IIB YP_003974199.1 COG1388 FOG: LysM repeat YP_003974200.1 COG0379 Quinolinate synthase YP_003974201.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_003974202.1 COG0029 Aspartate oxidase YP_003974203.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_003974204.1 COG1827 Predicted small molecule binding protein (contains 3H domain) YP_003974205.1 COG0077 Prephenate dehydratase YP_003974206.1 COG4492 ACT domain-containing protein YP_003974207.1 COG0536 Predicted GTPase YP_003974209.1 COG0211 Ribosomal protein L27 YP_003974210.1 COG2868 Predicted ribosomal protein YP_003974211.1 COG0261 Ribosomal protein L21 YP_003974212.1 COG1994 Zn-dependent proteases YP_003974213.1 COG0739 Membrane proteins related to metalloendopeptidases YP_003974214.1 COG2894 Septum formation inhibitor-activating ATPase YP_003974215.1 COG0850 Septum formation inhibitor YP_003974216.1 COG2891 Cell shape-determining protein YP_003974217.1 COG1792 Cell shape-determining protein YP_003974218.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_003974219.1 COG2003 DNA repair proteins YP_003974220.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_003974222.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_003974223.1 COG0285 Folylpolyglutamate synthase YP_003974224.1 COG0525 Valyl-tRNA synthetase YP_003974227.1 COG0739 Membrane proteins related to metalloendopeptidases YP_003974228.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_003974229.1 COG0113 Delta-aminolevulinic acid dehydratase YP_003974230.1 COG1587 Uroporphyrinogen-III synthase YP_003974231.1 COG0181 Porphobilinogen deaminase YP_003974232.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_003974233.1 COG0373 Glutamyl-tRNA reductase YP_003974235.1 COG0218 Predicted GTPase YP_003974236.1 COG0466 ATP-dependent Lon protease, bacterial type YP_003974237.1 COG1067 Predicted ATP-dependent protease YP_003974238.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_003974239.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_003974240.1 COG0457 FOG: TPR repeat YP_003974241.1 COG0066 3-isopropylmalate dehydratase small subunit YP_003974242.1 COG0065 3-isopropylmalate dehydratase large subunit YP_003974243.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_003974244.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_003974245.1 COG0059 Ketol-acid reductoisomerase YP_003974246.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_003974247.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_003974248.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003974249.1 COG3861 Uncharacterized protein conserved in bacteria YP_003974250.1 COG0622 Predicted phosphoesterase YP_003974251.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_003974252.1 COG0689 RNase PH YP_003974253.1 COG5401 Spore germination protein YP_003974254.1 COG0796 Glutamate racemase YP_003974255.1 COG1846 Transcriptional regulators YP_003974256.1 COG2771 DNA-binding HTH domain-containing proteins YP_003974257.1 COG0824 Predicted thioesterase YP_003974258.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_003974259.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_003974260.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_003974262.1 COG0527 Aspartokinases YP_003974263.1 COG0322 Nuclease subunit of the excinuclease complex YP_003974264.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_003974265.1 COG3534 Alpha-L-arabinofuranosidase YP_003974266.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_003974267.1 COG2086 Electron transfer flavoprotein, beta subunit YP_003974268.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_003974269.1 COG1309 Transcriptional regulator YP_003974270.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_003974271.1 COG3766 Predicted membrane protein YP_003974272.1 COG1193 Mismatch repair ATPase (MutS family) YP_003974273.1 COG1796 DNA polymerase IV (family X) YP_003974274.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_003974275.1 COG3027 Uncharacterized protein conserved in bacteria YP_003974276.1 COG1039 Ribonuclease HIII YP_003974277.1 COG0073 EMAP domain YP_003974278.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_003974279.1 COG0566 rRNA methylases YP_003974281.1 COG3835 Sugar diacid utilization regulator YP_003974282.1 COG0277 FAD/FMN-containing dehydrogenases YP_003974283.1 COG0247 Fe-S oxidoreductase YP_003974284.1 COG0346 Lactoylglutathione lyase and related lyases YP_003974285.1 COG1966 Carbon starvation protein, predicted membrane protein YP_003974286.1 COG3534 Alpha-L-arabinofuranosidase YP_003974287.1 COG0395 ABC-type sugar transport system, permease component YP_003974288.1 COG1175 ABC-type sugar transport systems, permease components YP_003974289.1 COG1653 ABC-type sugar transport system, periplasmic component YP_003974290.1 COG0371 Glycerol dehydrogenase and related enzymes YP_003974291.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_003974292.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_003974293.1 COG1069 Ribulose kinase YP_003974294.1 COG2160 L-arabinose isomerase YP_003974295.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003974297.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_003974298.1 COG1309 Transcriptional regulator YP_003974299.1 COG3507 Beta-xylosidase YP_003974300.1 COG1363 Cellulase M and related proteins YP_003974302.1 COG3326 Predicted membrane protein YP_003974303.1 COG0292 Ribosomal protein L20 YP_003974304.1 COG0291 Ribosomal protein L35 YP_003974305.1 COG0290 Translation initiation factor 3 (IF-3) YP_003974308.1 COG1346 Putative effector of murein hydrolase YP_003974309.1 COG1380 Putative effector of murein hydrolase LrgA YP_003974310.1 COG3279 Response regulator of the LytR/AlgR family YP_003974311.1 COG3275 Putative regulator of cell autolysis YP_003974312.1 COG1011 Predicted hydrolase (HAD superfamily) YP_003974313.1 COG0441 Threonyl-tRNA synthetase YP_003974315.1 COG0398 Uncharacterized conserved protein YP_003974316.1 COG1484 DNA replication protein YP_003974317.1 COG3611 Replication initiation/membrane attachment protein YP_003974318.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_003974320.1 COG1586 S-adenosylmethionine decarboxylase YP_003974321.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_003974322.1 COG1733 Predicted transcriptional regulators YP_003974323.1 COG2814 Arabinose efflux permease YP_003974324.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_003974325.1 COG0237 Dephospho-CoA kinase YP_003974326.1 COG1971 Predicted membrane protein YP_003974327.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_003974328.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_003974329.1 COG0642 Signal transduction histidine kinase YP_003974330.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003974331.1 COG0039 Malate/lactate dehydrogenases YP_003974332.1 COG0538 Isocitrate dehydrogenases YP_003974333.1 COG0372 Citrate synthase YP_003974334.1 COG2707 Predicted membrane protein YP_003974335.1 COG0628 Predicted permease YP_003974336.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_003974337.1 COG0469 Pyruvate kinase YP_003974338.1 COG0205 6-phosphofructokinase YP_003974339.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_003974340.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_003974341.1 COG0281 Malic enzyme YP_003974342.1 COG0587 DNA polymerase III, alpha subunit YP_003974346.1 COG0618 Exopolyphosphatase-related proteins YP_003974348.1 COG4109 Predicted transcriptional regulator containing CBS domains YP_003974349.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_003974350.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003974352.1 COG0165 Argininosuccinate lyase YP_003974353.1 COG0137 Argininosuccinate synthase YP_003974355.1 COG0521 Molybdopterin biosynthesis enzymes YP_003974356.1 COG0282 Acetate kinase YP_003974357.1 COG0827 Adenine-specific DNA methylase YP_003974358.1 COG2077 Peroxiredoxin YP_003974359.1 COG3874 Uncharacterized conserved protein YP_003974361.1 COG1714 Predicted membrane protein/domain YP_003974362.1 COG0616 Periplasmic serine proteases (ClpP class) YP_003974363.1 COG0061 Predicted sugar kinase YP_003974364.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_003974365.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_003974367.1 COG0301 Thiamine biosynthesis ATP pyrophosphatase YP_003974368.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_003974369.1 COG1114 Branched-chain amino acid permeases YP_003974370.1 COG4477 Negative regulator of septation ring formation YP_003974371.1 COG1387 Histidinol phosphatase and related hydrolases of the PHP family YP_003974372.1 COG1309 Transcriptional regulator YP_003974373.1 COG1956 GAF domain-containing protein YP_003974374.1 COG2199 FOG: GGDEF domain YP_003974375.1 COG0522 Ribosomal protein S4 and related proteins YP_003974376.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003974377.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_003974378.1 COG1335 Amidases related to nicotinamidase YP_003974379.1 COG1335 Amidases related to nicotinamidase YP_003974380.1 COG1846 Transcriptional regulators YP_003974381.1 COG1846 Transcriptional regulators YP_003974382.1 COG2259 Predicted membrane protein YP_003974383.1 COG0346 Lactoylglutathione lyase and related lyases YP_003974384.1 COG0400 Predicted esterase YP_003974386.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003974387.1 COG0583 Transcriptional regulator YP_003974389.1 COG0162 Tyrosyl-tRNA synthetase YP_003974390.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_003974391.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003974392.1 COG0517 FOG: CBS domain YP_003974393.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_003974394.1 COG1360 Flagellar motor protein YP_003974395.1 COG1291 Flagellar motor component YP_003974396.1 COG1609 Transcriptional regulators YP_003974397.1 COG1605 Chorismate mutase YP_003974399.1 COG4980 Gas vesicle protein YP_003974400.1 COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain YP_003974401.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_003974402.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_003974403.1 COG0073 EMAP domain YP_003974404.1 COG4848 Uncharacterized protein conserved in bacteria YP_003974405.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_003974406.1 COG3613 Nucleoside 2-deoxyribosyltransferase YP_003974407.1 COG1363 Cellulase M and related proteins YP_003974408.1 COG5584 Predicted small secreted protein YP_003974409.1 COG0281 Malic enzyme YP_003974410.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_003974411.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_003974413.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_003974414.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_003974415.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_003974417.1 COG1514 2'-5' RNA ligase YP_003974418.1 COG0031 Cysteine synthase YP_003974419.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_003974420.1 COG2252 Permeases YP_003974421.1 COG1349 Transcriptional regulators of sugar metabolism YP_003974422.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_003974423.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_003974424.1 COG2081 Predicted flavoproteins YP_003974425.1 COG1292 Choline-glycine betaine transporter YP_003974427.1 COG5578 Predicted integral membrane protein YP_003974428.1 COG0673 Predicted dehydrogenases and related proteins YP_003974430.1 COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins YP_003974431.1 COG4209 ABC-type polysaccharide transport system, permease component YP_003974432.1 COG1653 ABC-type sugar transport system, periplasmic component YP_003974433.1 COG0395 ABC-type sugar transport system, permease component YP_003974434.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_003974435.1 COG2124 Cytochrome P450 YP_003974436.1 COG0502 Biotin synthase and related enzymes YP_003974437.1 COG0132 Dethiobiotin synthetase YP_003974438.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_003974439.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_003974440.1 COG1424 Pimeloyl-CoA synthetase YP_003974441.1 COG1073 Hydrolases of the alpha/beta superfamily YP_003974443.1 COG0607 Rhodanese-related sulfurtransferase YP_003974444.1 COG0495 Leucyl-tRNA synthetase YP_003974446.1 COG2202 FOG: PAS/PAC domain YP_003974447.1 COG0477 Permeases of the major facilitator superfamily YP_003974449.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_003974450.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_003974451.1 COG0642 Signal transduction histidine kinase YP_003974452.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003974453.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_003974454.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_003974456.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_003974457.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003974458.1 COG1725 Predicted transcriptional regulators YP_003974461.1 COG0640 Predicted transcriptional regulators YP_003974462.1 COG0477 Permeases of the major facilitator superfamily YP_003974463.1 COG1242 Predicted Fe-S oxidoreductase YP_003974464.1 COG0500 SAM-dependent methyltransferases YP_003974466.1 COG2267 Lysophospholipase YP_003974467.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_003974468.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_003974469.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_003974470.1 COG0192 S-adenosylmethionine synthetase YP_003974471.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_003974473.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_003974474.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_003974475.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_003974476.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_003974477.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_003974479.1 COG4824 Phage-related holin (Lysis protein) YP_003974480.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_003974483.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_003974484.1 COG0759 Uncharacterized conserved protein YP_003974485.1 COG0288 Carbonic anhydrase YP_003974486.1 COG0523 Putative GTPases (G3E family) YP_003974487.1 COG0254 Ribosomal protein L31 YP_003974488.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_003974489.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_003974491.1 COG4305 Endoglucanase C-terminal domain/subunit and related proteins YP_003974494.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_003974495.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_003974496.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_003974497.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_003974498.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_003974499.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_003974500.1 COG0447 Dihydroxynaphthoic acid synthase YP_003974501.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003974502.1 COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_003974503.1 COG1169 Isochorismate synthase YP_003974504.1 COG1734 DnaK suppressor protein YP_003974505.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_003974506.1 COG0438 Glycosyltransferase YP_003974509.1 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) YP_003974510.1 COG0058 Glucan phosphorylase YP_003974511.1 COG0297 Glycogen synthase YP_003974512.1 COG0448 ADP-glucose pyrophosphorylase YP_003974513.1 COG0448 ADP-glucose pyrophosphorylase YP_003974514.1 COG0296 1,4-alpha-glucan branching enzyme YP_003974515.1 COG3859 Predicted membrane protein YP_003974516.1 COG3764 Sortase (surface protein transpeptidase) YP_003974518.1 COG2268 Uncharacterized protein conserved in bacteria YP_003974520.1 COG1940 Transcriptional regulator/sugar kinase YP_003974522.1 COG1454 Alcohol dehydrogenase, class IV YP_003974523.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003974524.1 COG1510 Predicted transcriptional regulators YP_003974525.1 COG0495 Leucyl-tRNA synthetase YP_003974526.1 COG0569 K+ transport systems, NAD-binding component YP_003974527.1 COG0168 Trk-type K+ transport systems, membrane components YP_003974528.1 COG4682 Predicted membrane protein YP_003974529.1 COG1705 Muramidase (flagellum-specific) YP_003974530.1 COG0477 Permeases of the major facilitator superfamily YP_003974532.1 COG1968 Uncharacterized bacitracin resistance protein YP_003974533.1 COG0628 Predicted permease YP_003974534.1 COG0673 Predicted dehydrogenases and related proteins YP_003974535.1 COG0693 Putative intracellular protease/amidase YP_003974536.1 COG4806 L-rhamnose isomerase YP_003974537.1 COG3254 Uncharacterized conserved protein YP_003974538.1 COG1070 Sugar (pentulose and hexulose) kinases YP_003974539.1 COG1349 Transcriptional regulators of sugar metabolism YP_003974540.1 COG3347 Uncharacterized conserved protein YP_003974541.1 COG0840 Methyl-accepting chemotaxis protein YP_003974542.1 COG0840 Methyl-accepting chemotaxis protein YP_003974543.1 COG0840 Methyl-accepting chemotaxis protein YP_003974544.1 COG0840 Methyl-accepting chemotaxis protein YP_003974545.1 COG1899 Deoxyhypusine synthase YP_003974547.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_003974548.1 COG0432 Uncharacterized conserved protein YP_003974549.1 COG0366 Glycosidases YP_003974550.1 COG1253 Hemolysins and related proteins containing CBS domains YP_003974551.1 COG2738 Predicted Zn-dependent protease YP_003974554.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_003974557.1 COG0166 Glucose-6-phosphate isomerase YP_003974558.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_003974559.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_003974560.1 COG2155 Uncharacterized conserved protein YP_003974561.1 COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) YP_003974562.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_003974563.1 COG1522 Transcriptional regulators YP_003974564.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003974565.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_003974566.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_003974567.1 COG0642 Signal transduction histidine kinase YP_003974568.1 COG5283 Phage-related tail protein YP_003974569.1 COG5018 Inhibitor of the KinA pathway to sporulation, predicted exonuclease YP_003974571.1 COG0477 Permeases of the major facilitator superfamily YP_003974572.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_003974573.1 COG3011 Uncharacterized protein conserved in bacteria YP_003974575.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_003974576.1 COG4565 Response regulator of citrate/malate metabolism YP_003974577.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein YP_003974578.1 COG3845 ABC-type uncharacterized transport systems, ATPase components YP_003974579.1 COG4603 ABC-type uncharacterized transport system, permease component YP_003974580.1 COG1079 Uncharacterized ABC-type transport system, permease component YP_003974581.1 COG3493 Na+/citrate symporter YP_003974583.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_003974584.1 COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit YP_003974585.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_003974586.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_003974587.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_003974588.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_003974589.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_003974590.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_003974591.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_003974592.1 COG0793 Periplasmic protease YP_003974594.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_003974597.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_003974598.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_003974599.1 COG1335 Amidases related to nicotinamidase YP_003974600.1 COG5506 Uncharacterized conserved protein YP_003974603.1 COG0628 Predicted permease YP_003974605.1 COG1418 Predicted HD superfamily hydrolase YP_003974606.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003974608.1 COG1511 Predicted membrane protein YP_003974609.1 COG2508 Regulator of polyketide synthase expression YP_003974610.1 COG0686 Alanine dehydrogenase YP_003974611.1 COG5634 Uncharacterized conserved protein YP_003974612.1 COG3251 Uncharacterized protein conserved in bacteria YP_003974613.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003974614.1 COG1535 Isochorismate hydrolase YP_003974615.1 COG1021 Peptide arylation enzymes YP_003974616.1 COG1169 Isochorismate synthase YP_003974617.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003974618.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_003974620.1 COG0621 2-methylthioadenine synthetase YP_003974621.1 COG2041 Sulfite oxidase and related enzymes YP_003974622.1 COG1268 Uncharacterized conserved protein YP_003974623.1 COG2056 Predicted permease YP_003974624.1 COG0260 Leucyl aminopeptidase YP_003974625.1 COG1963 Uncharacterized protein conserved in bacteria YP_003974626.1 COG3584 Uncharacterized protein conserved in bacteria YP_003974628.1 COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain YP_003974629.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_003974630.1 COG0492 Thioredoxin reductase YP_003974632.1 COG0516 IMP dehydrogenase/GMP reductase YP_003974633.1 COG0316 Uncharacterized conserved protein YP_003974634.1 COG0253 Diaminopimelate epimerase YP_003974635.1 COG1972 Nucleoside permease YP_003974636.1 COG4844 Uncharacterized protein conserved in bacteria YP_003974637.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_003974638.1 COG3479 Phenolic acid decarboxylase YP_003974639.1 COG4837 Uncharacterized protein conserved in bacteria YP_003974640.1 COG0694 Thioredoxin-like proteins and domains YP_003974641.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_003974642.1 COG0083 Homoserine kinase YP_003974643.1 COG0498 Threonine synthase YP_003974644.1 COG0460 Homoserine dehydrogenase YP_003974646.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_003974647.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_003974648.1 COG2445 Uncharacterized conserved protein YP_003974649.1 COG4470 Uncharacterized protein conserved in bacteria YP_003974651.1 COG0320 Lipoate synthase YP_003974652.1 COG0739 Membrane proteins related to metalloendopeptidases YP_003974654.1 COG3377 Uncharacterized conserved protein YP_003974655.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_003974656.1 COG0730 Predicted permeases YP_003974657.1 COG1801 Uncharacterized conserved protein YP_003974660.1 COG0477 Permeases of the major facilitator superfamily YP_003974661.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_003974662.1 COG2508 Regulator of polyketide synthase expression YP_003974663.1 COG2233 Xanthine/uracil permeases YP_003974664.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003974669.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_003974675.1 COG0778 Nitroreductase YP_003974676.1 COG0778 Nitroreductase YP_003974678.1 COG1944 Uncharacterized conserved protein YP_003974679.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003974680.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003974681.1 COG0842 ABC-type multidrug transport system, permease component YP_003974682.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_003974688.1 COG0477 Permeases of the major facilitator superfamily YP_003974689.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_003974690.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_003974691.1 COG0547 Anthranilate phosphoribosyltransferase YP_003974692.1 COG2356 Endonuclease I YP_003974693.1 COG3340 Peptidase E YP_003974694.1 COG3839 ABC-type sugar transport systems, ATPase components YP_003974695.1 COG2188 Transcriptional regulators YP_003974696.1 COG0524 Sugar kinases, ribokinase family YP_003974697.1 COG0395 ABC-type sugar transport system, permease component YP_003974698.1 COG1175 ABC-type sugar transport systems, permease components YP_003974699.1 COG1653 ABC-type sugar transport system, periplasmic component YP_003974700.1 COG2222 Predicted phosphosugar isomerases YP_003974701.1 COG0322 Nuclease subunit of the excinuclease complex YP_003974702.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_003974703.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_003974704.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_003974705.1 COG0520 Selenocysteine lyase YP_003974706.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_003974707.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_003974709.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_003974710.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_003974711.1 COG2011 ABC-type metal ion transport system, permease component YP_003974712.1 COG1135 ABC-type metal ion transport system, ATPase component YP_003974714.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_003974715.1 COG1658 Small primase-like proteins (Toprim domain) YP_003974717.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_003974718.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_003974719.1 COG1960 Acyl-CoA dehydrogenases YP_003974720.1 COG0183 Acetyl-CoA acetyltransferase YP_003974721.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_003974723.1 COG0506 Proline dehydrogenase YP_003974726.1 COG1846 Transcriptional regulators YP_003974727.1 COG0477 Permeases of the major facilitator superfamily YP_003974730.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_003974732.1 COG1164 Oligoendopeptidase F YP_003974733.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003974734.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_003974735.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_003974736.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003974737.1 COG0642 Signal transduction histidine kinase YP_003974738.1 COG0366 Glycosidases YP_003974739.1 COG1309 Transcriptional regulator YP_003974740.1 COG0114 Fumarase YP_003974742.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_003974743.1 COG0531 Amino acid transporters YP_003974745.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_003974746.1 COG4585 Signal transduction histidine kinase YP_003974747.1 COG4758 Predicted membrane protein YP_003974748.1 COG3595 Uncharacterized conserved protein YP_003974749.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_003974751.1 COG0477 Permeases of the major facilitator superfamily YP_003974752.1 COG2096 Uncharacterized conserved protein YP_003974753.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_003974754.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003974755.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_003974757.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003974758.1 COG3386 Gluconolactonase YP_003974759.1 COG0642 Signal transduction histidine kinase YP_003974760.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003974762.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003974764.1 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes YP_003974766.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_003974767.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_003974768.1 COG0845 Membrane-fusion protein YP_003974769.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_003974770.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003974771.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003974772.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_003974773.1 COG0531 Amino acid transporters YP_003974775.1 COG1846 Transcriptional regulators YP_003974776.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_003974777.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_003974778.1 COG1910 Periplasmic molybdate-binding protein/domain YP_003974779.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_003974780.1 COG4149 ABC-type molybdate transport system, permease component YP_003974781.1 COG0346 Lactoylglutathione lyase and related lyases YP_003974782.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_003974785.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_003974787.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_003974788.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_003974789.1 COG3973 Superfamily I DNA and RNA helicases YP_003974790.1 COG2860 Predicted membrane protein YP_003974792.1 COG1495 Disulfide bond formation protein DsbB YP_003974793.1 COG1651 Protein-disulfide isomerase YP_003974794.1 COG2217 Cation transport ATPase YP_003974795.1 COG2217 Cation transport ATPase YP_003974796.1 COG2608 Copper chaperone YP_003974797.1 COG1937 Uncharacterized protein conserved in bacteria YP_003974798.1 COG0673 Predicted dehydrogenases and related proteins YP_003974799.1 COG1182 Acyl carrier protein phosphodiesterase YP_003974800.1 COG1289 Predicted membrane protein YP_003974801.1 COG1846 Transcriptional regulators YP_003974802.1 COG3000 Sterol desaturase YP_003974803.1 COG2076 Membrane transporters of cations and cationic drugs YP_003974804.1 COG1309 Transcriptional regulator YP_003974805.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003974806.1 COG0691 tmRNA-binding protein YP_003974807.1 COG0557 Exoribonuclease R YP_003974808.1 COG1647 Esterase/lipase YP_003974809.1 COG1314 Preprotein translocase subunit SecG YP_003974810.1 COG1396 Predicted transcriptional regulators YP_003974811.1 COG1396 Predicted transcriptional regulators YP_003974812.1 COG1396 Predicted transcriptional regulators YP_003974813.1 COG1733 Predicted transcriptional regulators YP_003974814.1 COG0840 Methyl-accepting chemotaxis protein YP_003974815.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_003974816.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_003974817.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_003974818.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_003974819.1 COG1510 Predicted transcriptional regulators YP_003974820.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_003974821.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_003974822.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_003974823.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_003974824.1 COG1510 Predicted transcriptional regulators YP_003974825.1 COG2095 Multiple antibiotic transporter YP_003974827.1 COG4640 Predicted membrane protein YP_003974828.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003974829.1 COG0477 Permeases of the major facilitator superfamily YP_003974831.1 COG2120 Uncharacterized proteins, LmbE homologs YP_003974834.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_003974835.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_003974836.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_003974837.1 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase YP_003974838.1 COG2234 Predicted aminopeptidases YP_003974839.1 COG0148 Enolase YP_003974840.1 COG0696 Phosphoglyceromutase YP_003974841.1 COG0149 Triosephosphate isomerase YP_003974842.1 COG0126 3-phosphoglycerate kinase YP_003974844.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_003974845.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_003974846.1 COG0477 Permeases of the major facilitator superfamily YP_003974847.1 COG1609 Transcriptional regulators YP_003974848.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_003974849.1 COG0583 Transcriptional regulator YP_003974850.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003974851.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_003974852.1 COG3858 Predicted glycosyl hydrolase YP_003974853.1 COG1556 Uncharacterized conserved protein YP_003974854.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_003974855.1 COG0247 Fe-S oxidoreductase YP_003974856.1 COG2186 Transcriptional regulators YP_003974857.1 COG1620 L-lactate permease YP_003974858.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_003974860.1 COG5039 Exopolysaccharide biosynthesis protein YP_003974861.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_003974862.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_003974863.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_003974865.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003974866.1 COG5039 Exopolysaccharide biosynthesis protein YP_003974867.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003974869.1 COG0438 Glycosyltransferase YP_003974870.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003974871.1 COG0438 Glycosyltransferase YP_003974872.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_003974873.1 COG0489 ATPases involved in chromosome partitioning YP_003974874.1 COG3944 Capsular polysaccharide biosynthesis protein YP_003974875.1 COG1396 Predicted transcriptional regulators YP_003974877.1 COG1846 Transcriptional regulators YP_003974878.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003974879.1 COG0842 ABC-type multidrug transport system, permease component YP_003974880.1 COG0842 ABC-type multidrug transport system, permease component YP_003974881.1 COG1247 Sortase and related acyltransferases YP_003974882.1 COG2021 Homoserine acetyltransferase YP_003974883.1 COG0583 Transcriptional regulator YP_003974885.1 COG1621 Beta-fructosidases (levanase/invertase) YP_003974886.1 COG0531 Amino acid transporters YP_003974887.1 COG1309 Transcriptional regulator YP_003974888.1 COG2076 Membrane transporters of cations and cationic drugs YP_003974889.1 COG2076 Membrane transporters of cations and cationic drugs YP_003974890.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_003974891.1 COG2318 Uncharacterized protein conserved in bacteria YP_003974892.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_003974893.1 COG0693 Putative intracellular protease/amidase YP_003974894.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_003974895.1 COG1694 Predicted pyrophosphatase YP_003974896.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_003974897.1 COG0288 Carbonic anhydrase YP_003974898.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_003974899.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_003974900.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_003974901.1 COG0642 Signal transduction histidine kinase YP_003974902.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003974903.1 COG4290 Guanyl-specific ribonuclease Sa YP_003974904.1 COG2162 Arylamine N-acetyltransferase YP_003974905.1 COG1925 Phosphotransferase system, HPr-related proteins YP_003974906.1 COG1481 Uncharacterized protein conserved in bacteria YP_003974907.1 COG0391 Uncharacterized conserved protein YP_003974908.1 COG1660 Predicted P-loop-containing kinase YP_003974909.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_003974910.1 COG0492 Thioredoxin reductase YP_003974911.1 COG3883 Uncharacterized protein conserved in bacteria YP_003974912.1 COG0457 FOG: TPR repeat YP_003974913.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003974916.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003974917.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_003974918.1 COG0107 Imidazoleglycerol-phosphate synthase YP_003974919.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_003974920.1 COG0118 Glutamine amidotransferase YP_003974921.1 COG0131 Imidazoleglycerol-phosphate dehydratase YP_003974922.1 COG0141 Histidinol dehydrogenase YP_003974923.1 COG0040 ATP phosphoribosyltransferase YP_003974924.1 COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis YP_003974925.1 COG4990 Uncharacterized protein conserved in bacteria YP_003974927.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_003974928.1 COG0546 Predicted phosphatases YP_003974929.1 COG0370 Fe2+ transport system protein B YP_003974930.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_003974931.1 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism YP_003974932.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase YP_003974933.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_003974934.1 COG2188 Transcriptional regulators YP_003974935.1 COG1409 Predicted phosphohydrolases YP_003974936.1 COG1950 Predicted membrane protein YP_003974937.1 COG1983 Putative stress-responsive transcriptional regulator YP_003974938.1 COG3595 Uncharacterized conserved protein YP_003974941.1 COG0178 Excinuclease ATPase subunit YP_003974942.1 COG0556 Helicase subunit of the DNA excision repair complex YP_003974943.1 COG4897 Uncharacterized protein conserved in bacteria YP_003974944.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_003974945.1 COG1309 Transcriptional regulator YP_003974946.1 COG0477 Permeases of the major facilitator superfamily YP_003974949.1 COG3391 Uncharacterized conserved protein YP_003974950.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_003974952.1 COG0793 Periplasmic protease YP_003974953.1 COG2177 Cell division protein YP_003974954.1 COG2884 Predicted ATPase involved in cell division YP_003974955.1 COG2010 Cytochrome c, mono- and diheme variants YP_003974956.1 COG1284 Uncharacterized conserved protein YP_003974957.1 COG1186 Protein chain release factor B YP_003974958.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_003974959.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_003974962.1 COG1516 Flagellin-specific chaperone FliS YP_003974963.1 COG1345 Flagellar capping protein YP_003974964.1 COG1334 Uncharacterized flagellar protein FlaG YP_003974965.1 COG1344 Flagellin and related hook-associated proteins YP_003974966.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_003974967.1 COG1699 Uncharacterized protein conserved in bacteria YP_003974969.1 COG1344 Flagellin and related hook-associated proteins YP_003974970.1 COG1256 Flagellar hook-associated protein YP_003974972.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_003974974.1 COG1040 Predicted amidophosphoribosyltransferases YP_003974976.1 COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) YP_003974977.1 COG1307 Uncharacterized protein conserved in bacteria YP_003974978.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_003974979.1 COG4585 Signal transduction histidine kinase YP_003974980.1 COG1739 Uncharacterized conserved protein YP_003974981.1 COG1316 Transcriptional regulator YP_003974982.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_003974983.1 COG0438 Glycosyltransferase YP_003974984.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003974987.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_003974988.1 COG0438 Glycosyltransferase YP_003974989.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_003974990.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_003974992.1 COG2247 Putative cell wall-binding domain YP_003974993.1 COG2247 Putative cell wall-binding domain YP_003974995.1 COG1316 Transcriptional regulator YP_003974996.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_003974997.1 COG1210 UDP-glucose pyrophosphorylase YP_003974998.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_003974999.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_003975000.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003975001.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_003975002.1 COG0615 Cytidylyltransferase YP_003975003.1 COG1922 Teichoic acid biosynthesis proteins YP_003975004.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_003975005.1 COG4193 Beta- N-acetylglucosaminidase YP_003975006.1 COG1482 Phosphomannose isomerase YP_003975010.1 COG1216 Predicted glycosyltransferases YP_003975011.1 COG0477 Permeases of the major facilitator superfamily YP_003975012.1 COG1316 Transcriptional regulator YP_003975013.1 COG0561 Predicted hydrolases of the HAD superfamily YP_003975014.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_003975016.1 COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) YP_003975018.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_003975022.1 COG1609 Transcriptional regulators YP_003975023.1 COG0524 Sugar kinases, ribokinase family YP_003975024.1 COG1869 ABC-type ribose transport system, auxiliary component YP_003975025.1 COG1129 ABC-type sugar transport system, ATPase component YP_003975026.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_003975027.1 COG1879 ABC-type sugar transport system, periplasmic component YP_003975030.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_003975031.1 COG3527 Alpha-acetolactate decarboxylase YP_003975032.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_003975033.1 COG0583 Transcriptional regulator YP_003975034.1 COG5337 Spore coat assembly protein YP_003975036.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_003975037.1 COG3711 Transcriptional antiterminator YP_003975038.1 COG3414 Phosphotransferase system, galactitol-specific IIB component YP_003975039.1 COG3037 Uncharacterized protein conserved in bacteria YP_003975040.1 COG0036 Pentose-5-phosphate-3-epimerase YP_003975042.1 COG0405 Gamma-glutamyltransferase YP_003975043.1 COG1522 Transcriptional regulators YP_003975044.1 COG2059 Chromate transport protein ChrA YP_003975045.1 COG2059 Chromate transport protein ChrA YP_003975047.1 COG0655 Multimeric flavodoxin WrbA YP_003975048.1 COG0583 Transcriptional regulator YP_003975051.1 COG0459 Chaperonin GroEL (HSP60 family) YP_003975052.1 COG3517 Uncharacterized protein conserved in bacteria YP_003975057.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_003975059.1 COG4464 Capsular polysaccharide biosynthesis protein YP_003975060.1 COG0489 ATPases involved in chromosome partitioning YP_003975061.1 COG3944 Capsular polysaccharide biosynthesis protein YP_003975064.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_003975065.1 COG0561 Predicted hydrolases of the HAD superfamily YP_003975066.1 COG1349 Transcriptional regulators of sugar metabolism YP_003975067.1 COG0629 Single-stranded DNA-binding protein YP_003975070.1 COG1970 Large-conductance mechanosensitive channel YP_003975071.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_003975072.1 COG0457 FOG: TPR repeat YP_003975073.1 COG4786 Flagellar basal body rod protein YP_003975074.1 COG4786 Flagellar basal body rod protein YP_003975075.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_003975076.1 COG1609 Transcriptional regulators YP_003975077.1 COG1846 Transcriptional regulators YP_003975078.1 COG0477 Permeases of the major facilitator superfamily YP_003975079.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_003975080.1 COG0477 Permeases of the major facilitator superfamily YP_003975081.1 COG1335 Amidases related to nicotinamidase YP_003975084.1 COG0004 Ammonia permease YP_003975085.1 COG0347 Nitrogen regulatory protein PII YP_003975086.1 COG0772 Bacterial cell division membrane protein YP_003975087.1 COG0671 Membrane-associated phospholipid phosphatase YP_003975089.1 COG0739 Membrane proteins related to metalloendopeptidases YP_003975090.1 COG1247 Sortase and related acyltransferases YP_003975092.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_003975093.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_003975094.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_003975095.1 COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog YP_003975096.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_003975097.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_003975098.1 COG2089 Sialic acid synthase YP_003975100.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003975101.1 COG0789 Predicted transcriptional regulators YP_003975103.1 COG2910 Putative NADH-flavin reductase YP_003975104.1 COG1959 Predicted transcriptional regulator YP_003975105.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_003975106.1 COG0832 Urea amidohydrolase (urease) beta subunit YP_003975107.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_003975108.1 COG3237 Uncharacterized protein conserved in bacteria YP_003975110.1 COG0457 FOG: TPR repeat YP_003975111.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_003975112.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_003975114.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_003975115.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_003975117.1 COG2385 Sporulation protein and related proteins YP_003975118.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_003975120.1 COG4836 Predicted membrane protein YP_003975122.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_003975123.1 COG0055 F0F1-type ATP synthase, beta subunit YP_003975124.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_003975125.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_003975126.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_003975127.1 COG0711 F0F1-type ATP synthase, subunit b YP_003975128.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_003975129.1 COG0356 F0F1-type ATP synthase, subunit a YP_003975131.1 COG0035 Uracil phosphoribosyltransferase YP_003975132.1 COG0112 Glycine/serine hydroxymethyltransferase YP_003975133.1 COG4475 Uncharacterized protein conserved in bacteria YP_003975134.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_003975135.1 COG0394 Protein-tyrosine-phosphatase YP_003975136.1 COG1971 Predicted membrane protein YP_003975137.1 COG0009 Putative translation factor (SUA5) YP_003975142.1 COG2890 Methylase of polypeptide chain release factors YP_003975143.1 COG0216 Protein chain release factor A YP_003975144.1 COG0346 Lactoylglutathione lyase and related lyases YP_003975145.1 COG0789 Predicted transcriptional regulators YP_003975146.1 COG0679 Predicted permeases YP_003975147.1 COG0281 Malic enzyme YP_003975148.1 COG1435 Thymidine kinase YP_003975149.1 COG0254 Ribosomal protein L31 YP_003975150.1 COG1158 Transcription termination factor YP_003975151.1 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins YP_003975152.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_003975153.1 COG0176 Transaldolase YP_003975154.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_003975155.1 COG0784 FOG: CheY-like receiver YP_003975156.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_003975157.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_003975158.1 COG3343 DNA-directed RNA polymerase, delta subunit YP_003975159.1 COG1960 Acyl-CoA dehydrogenases YP_003975160.1 COG0247 Fe-S oxidoreductase YP_003975161.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003975162.1 COG4294 UV damage repair endonuclease YP_003975164.1 COG0262 Dihydrofolate reductase YP_003975165.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_003975166.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003975167.1 COG2181 Nitrate reductase gamma subunit YP_003975168.1 COG2180 Nitrate reductase delta subunit YP_003975169.1 COG1140 Nitrate reductase beta subunit YP_003975170.1 COG5013 Nitrate reductase alpha subunit YP_003975173.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_003975174.1 COG2223 Nitrate/nitrite transporter YP_003975175.1 COG0018 Arginyl-tRNA synthetase YP_003975176.1 COG4506 Uncharacterized protein conserved in bacteria YP_003975178.1 COG0535 Predicted Fe-S oxidoreductases YP_003975180.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003975182.1 COG0612 Predicted Zn-dependent peptidases YP_003975183.1 COG0612 Predicted Zn-dependent peptidases YP_003975185.1 COG3391 Uncharacterized conserved protein YP_003975186.1 COG3391 Uncharacterized conserved protein YP_003975188.1 COG0457 FOG: TPR repeat YP_003975190.1 COG2606 Uncharacterized conserved protein YP_003975191.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_003975192.1 COG0421 Spermidine synthase YP_003975193.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_003975196.1 COG1994 Zn-dependent proteases YP_003975197.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_003975198.1 COG1846 Transcriptional regulators YP_003975199.1 COG0531 Amino acid transporters YP_003975200.1 COG3465 Uncharacterized conserved protein YP_003975201.1 COG1078 HD superfamily phosphohydrolases YP_003975204.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003975205.1 COG0095 Lipoate-protein ligase A YP_003975206.1 COG0583 Transcriptional regulator YP_003975207.1 COG2855 Predicted membrane protein YP_003975209.1 COG0280 Phosphotransacetylase YP_003975210.1 COG3253 Uncharacterized conserved protein YP_003975211.1 COG2814 Arabinose efflux permease YP_003975212.1 COG0477 Permeases of the major facilitator superfamily YP_003975214.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_003975215.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_003975216.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_003975217.1 COG1209 dTDP-glucose pyrophosphorylase YP_003975218.1 COG0456 Acetyltransferases YP_003975219.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_003975220.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003975222.1 COG2363 Uncharacterized small membrane protein YP_003975223.1 COG2233 Xanthine/uracil permeases YP_003975225.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003975226.1 COG0692 Uracil DNA glycosylase YP_003975227.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_003975229.1 COG1695 Predicted transcriptional regulators YP_003975230.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_003975232.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_003975233.1 COG1621 Beta-fructosidases (levanase/invertase) YP_003975234.1 COG1264 Phosphotransferase system IIB components YP_003975237.1 COG3711 Transcriptional antiterminator YP_003975239.1 COG1404 Subtilisin-like serine proteases YP_003975241.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_003975243.1 COG0778 Nitroreductase YP_003975245.1 COG0772 Bacterial cell division membrane protein YP_003975246.1 COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases YP_003975248.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_003975249.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_003975250.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_003975251.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_003975252.1 COG2261 Predicted membrane protein YP_003975253.1 COG4468 Galactose-1-phosphate uridyltransferase YP_003975254.1 COG0153 Galactokinase YP_003975255.1 COG2246 Predicted membrane protein YP_003975256.1 COG1309 Transcriptional regulator YP_003975258.1 COG0500 SAM-dependent methyltransferases YP_003975260.1 COG3162 Predicted membrane protein YP_003975261.1 COG4147 Predicted symporter YP_003975262.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_003975263.1 COG0352 Thiamine monophosphate synthase YP_003975264.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_003975265.1 COG0583 Transcriptional regulator YP_003975266.1 COG1380 Putative effector of murein hydrolase LrgA YP_003975267.1 COG1346 Putative effector of murein hydrolase YP_003975268.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003975272.1 COG1346 Putative effector of murein hydrolase YP_003975273.1 COG4895 Uncharacterized conserved protein YP_003975274.1 COG1092 Predicted SAM-dependent methyltransferases YP_003975275.1 COG0346 Lactoylglutathione lyase and related lyases YP_003975276.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_003975278.1 COG1264 Phosphotransferase system IIB components YP_003975279.1 COG3711 Transcriptional antiterminator YP_003975280.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_003975281.1 COG5522 Predicted integral membrane protein YP_003975282.1 COG2234 Predicted aminopeptidases YP_003975283.1 COG0457 FOG: TPR repeat YP_003975284.1 COG1846 Transcriptional regulators YP_003975285.1 COG0162 Tyrosyl-tRNA synthetase YP_003975287.1 COG2357 Uncharacterized protein conserved in bacteria YP_003975288.1 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003975290.1 COG0569 K+ transport systems, NAD-binding component YP_003975292.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003975293.1 COG1696 Predicted membrane protein involved in D-alanine export YP_003975294.1 COG0236 Acyl carrier protein YP_003975295.1 COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) YP_003975296.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_003975297.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_003975298.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_003975299.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_003975300.1 COG1440 Phosphotransferase system cellobiose-specific component IIB YP_003975301.1 COG3711 Transcriptional antiterminator YP_003975303.1 COG2094 3-methyladenine DNA glycosylase YP_003975305.1 COG0753 Catalase YP_003975306.1 COG0842 ABC-type multidrug transport system, permease component YP_003975307.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003975308.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003975311.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003975312.1 COG1457 Purine-cytosine permease and related proteins YP_003975313.1 COG0063 Predicted sugar kinase YP_003975314.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_003975315.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_003975316.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_003975317.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_003975319.1 COG3493 Na+/citrate symporter YP_003975322.1 COG0726 Predicted xylanase/chitin deacetylase YP_003975323.1 COG3839 ABC-type sugar transport systems, ATPase components YP_003975324.1 COG2508 Regulator of polyketide synthase expression YP_003975325.1 COG1284 Uncharacterized conserved protein YP_003975327.1 COG1087 UDP-glucose 4-epimerase YP_003975329.1 COG4585 Signal transduction histidine kinase YP_003975330.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_003975331.1 COG2195 Di- and tripeptidases YP_003975334.1 COG4894 Uncharacterized conserved protein YP_003975336.1 COG0346 Lactoylglutathione lyase and related lyases YP_003975338.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003975344.1 COG2002 Regulators of stationary/sporulation gene expression YP_003975347.1 COG0620 Methionine synthase II (cobalamin-independent) YP_003975348.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_003975349.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003975350.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_003975351.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_003975352.1 COG2610 H+/gluconate symporter and related permeases YP_003975353.1 COG0500 SAM-dependent methyltransferases YP_003975354.1 COG1972 Nucleoside permease YP_003975357.1 COG0753 Catalase YP_003975358.1 COG2851 H+/citrate symporter YP_003975360.1 COG3711 Transcriptional antiterminator YP_003975362.1 COG2270 Permeases of the major facilitator superfamily YP_003975363.1 COG0513 Superfamily II DNA and RNA helicases YP_003975364.1 COG0346 Lactoylglutathione lyase and related lyases YP_003975365.1 COG1357 Uncharacterized low-complexity proteins YP_003975366.1 COG1278 Cold shock proteins YP_003975370.1 COG3209 Rhs family protein YP_003975371.1 COG3866 Pectate lyase YP_003975372.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003975373.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003975374.1 COG4340 Uncharacterized protein conserved in bacteria YP_003975378.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_003975379.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_003975380.1 COG1264 Phosphotransferase system IIB components YP_003975381.1 COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase YP_003975384.1 COG0439 Biotin carboxylase YP_003975385.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003975387.1 COG3886 Predicted HKD family nuclease YP_003975388.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_003975389.1 COG3507 Beta-xylosidase YP_003975391.1 COG2986 Histidine ammonia-lyase YP_003975392.1 COG2987 Urocanate hydratase YP_003975393.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_003975394.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_003975395.1 COG0833 Amino acid transporters YP_003975396.1 COG0213 Thymidine phosphorylase YP_003975397.1 COG1972 Nucleoside permease YP_003975398.1 COG0274 Deoxyribose-phosphate aldolase YP_003975399.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_003975401.1 COG3192 Ethanolamine utilization protein YP_003975402.1 COG1940 Transcriptional regulator/sugar kinase YP_003975403.1 COG3049 Penicillin V acylase and related amidases YP_003975405.1 COG0561 Predicted hydrolases of the HAD superfamily YP_003975410.1 COG5294 Uncharacterized protein conserved in bacteria YP_003975411.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_003975412.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_003975413.1 COG0642 Signal transduction histidine kinase YP_003975414.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003975416.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_003975417.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_003975418.1 COG1082 Sugar phosphate isomerases/epimerases YP_003975419.1 COG1082 Sugar phosphate isomerases/epimerases YP_003975420.1 COG0673 Predicted dehydrogenases and related proteins YP_003975421.1 COG0477 Permeases of the major facilitator superfamily YP_003975422.1 COG1082 Sugar phosphate isomerases/epimerases YP_003975423.1 COG3962 Acetolactate synthase YP_003975424.1 COG0524 Sugar kinases, ribokinase family YP_003975425.1 COG3718 Uncharacterized enzyme involved in inositol metabolism YP_003975426.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003975427.1 COG1349 Transcriptional regulators of sugar metabolism YP_003975428.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_003975430.1 COG5516 Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding YP_003975431.1 COG3448 CBS-domain-containing membrane protein YP_003975432.1 COG0477 Permeases of the major facilitator superfamily YP_003975433.1 COG0326 Molecular chaperone, HSP90 family YP_003975435.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003975436.1 COG1309 Transcriptional regulator YP_003975437.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003975439.1 COG1714 Predicted membrane protein/domain YP_003975440.1 COG2311 Predicted membrane protein YP_003975441.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_003975442.1 COG1309 Transcriptional regulator YP_003975443.1 COG2514 Predicted ring-cleavage extradiol dioxygenase YP_003975445.1 COG5039 Exopolysaccharide biosynthesis protein YP_003975446.1 COG1929 Glycerate kinase YP_003975447.1 COG2610 H+/gluconate symporter and related permeases YP_003975448.1 COG3835 Sugar diacid utilization regulator YP_003975450.1 COG1802 Transcriptional regulators YP_003975451.1 COG1070 Sugar (pentulose and hexulose) kinases YP_003975452.1 COG2610 H+/gluconate symporter and related permeases YP_003975453.1 COG0362 6-phosphogluconate dehydrogenase YP_003975455.1 COG0450 Peroxiredoxin YP_003975456.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_003975457.1 COG1378 Predicted transcriptional regulators YP_003975458.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_003975460.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_003975461.1 COG3855 Uncharacterized protein conserved in bacteria YP_003975462.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_003975463.1 COG1396 Predicted transcriptional regulators YP_003975465.1 COG0863 DNA modification methylase YP_003975468.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_003975469.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003975472.1 COG0316 Uncharacterized conserved protein YP_003975473.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_003975474.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_003975476.1 COG3378 Predicted ATPase YP_003975477.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_003975481.1 COG0863 DNA modification methylase YP_003975483.1 COG1576 Uncharacterized conserved protein YP_003975486.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_003975489.1 COG3863 Uncharacterized distant relative of cell wall-associated hydrolases YP_003975490.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003975491.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_003975492.1 COG0833 Amino acid transporters YP_003975493.1 COG4992 Ornithine/acetylornithine aminotransferase YP_003975494.1 COG5658 Predicted integral membrane protein YP_003975495.1 COG0640 Predicted transcriptional regulators YP_003975496.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_003975497.1 COG2850 Uncharacterized conserved protein YP_003975498.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_003975499.1 COG0477 Permeases of the major facilitator superfamily YP_003975500.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_003975501.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_003975502.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_003975503.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_003975504.1 COG4853 Uncharacterized protein conserved in bacteria YP_003975505.1 COG4863 Uncharacterized protein conserved in bacteria YP_003975506.1 COG5002 Signal transduction histidine kinase YP_003975507.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003975509.1 COG0104 Adenylosuccinate synthase YP_003975510.1 COG0346 Lactoylglutathione lyase and related lyases YP_003975511.1 COG0305 Replicative DNA helicase YP_003975515.1 COG2807 Cyanate permease YP_003975516.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_003975517.1 COG0359 Ribosomal protein L9 YP_003975518.1 COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain YP_003975519.1 COG4241 Predicted membrane protein YP_003975521.1 COG5577 Spore coat protein YP_003975522.1 COG1733 Predicted transcriptional regulators YP_003975523.1 COG1227 Inorganic pyrophosphatase/exopolyphosphatase YP_003975524.1 COG0642 Signal transduction histidine kinase YP_003975526.1 COG0477 Permeases of the major facilitator superfamily YP_003975527.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_003975529.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_003975530.1 COG1802 Transcriptional regulators YP_003975531.1 COG0789 Predicted transcriptional regulators YP_003975533.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003975534.1 COG0642 Signal transduction histidine kinase YP_003975536.1 COG0477 Permeases of the major facilitator superfamily YP_003975538.1 COG0640 Predicted transcriptional regulators YP_003975539.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_003975540.1 COG2808 Transcriptional regulator YP_003975541.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_003975542.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_003975543.1 COG0477 Permeases of the major facilitator superfamily YP_003975544.1 COG0346 Lactoylglutathione lyase and related lyases YP_003975545.1 COG1609 Transcriptional regulators YP_003975546.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_003975547.1 COG2169 Adenosine deaminase YP_003975548.1 COG0708 Exonuclease III YP_003975549.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003975550.1 COG1802 Transcriptional regulators YP_003975551.1 COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II YP_003975552.1 COG0238 Ribosomal protein S18 YP_003975553.1 COG0629 Single-stranded DNA-binding protein YP_003975554.1 COG0360 Ribosomal protein S6 YP_003975555.1 COG0012 Predicted GTPase, probable translation factor YP_003975556.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_003975557.1 COG4481 Uncharacterized protein conserved in bacteria YP_003975558.1 COG3949 Uncharacterized membrane protein YP_003975560.1 COG1475 Predicted transcriptional regulators YP_003975561.1 COG1192 ATPases involved in chromosome partitioning YP_003975563.1 COG1475 Predicted transcriptional regulators YP_003975564.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_003975565.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_003975566.1 COG0486 Predicted GTPase YP_003975567.1 COG1847 Predicted RNA-binding protein YP_003975568.1 COG0706 Preprotein translocase subunit YidC YP_003975569.1 COG0594 RNase P protein component YP_003975571.1 COG0593 ATPase involved in DNA replication initiation YP_003975572.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_003975573.1 COG2501 Uncharacterized conserved protein YP_003975574.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_003975576.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_003975577.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_003975579.1 COG0516 IMP dehydrogenase/GMP reductase YP_003975580.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_003975581.1 COG0214 Pyridoxine biosynthesis enzyme YP_003975582.1 COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis YP_003975583.1 COG0172 Seryl-tRNA synthetase YP_003975584.1 COG1428 Deoxynucleoside kinases YP_003975585.1 COG1428 Deoxynucleoside kinases YP_003975586.1 COG3858 Predicted glycosyl hydrolase YP_003975587.1 COG1335 Amidases related to nicotinamidase YP_003975588.1 COG0590 Cytosine/adenosine deaminases YP_003975589.1 COG2812 DNA polymerase III, gamma/tau subunits YP_003975590.1 COG0718 Uncharacterized protein conserved in bacteria YP_003975591.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_003975595.1 COG4915 5-bromo-4-chloroindolyl phosphate hydrolysis protein YP_003975596.1 COG3853 Uncharacterized protein involved in tellurite resistance YP_003975597.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_003975598.1 COG0125 Thymidylate kinase YP_003975599.1 COG3870 Uncharacterized protein conserved in bacteria YP_003975600.1 COG1728 Uncharacterized protein conserved in bacteria YP_003975601.1 COG0470 ATPase involved in DNA replication YP_003975602.1 COG1774 Uncharacterized homolog of PSP1 YP_003975603.1 COG4467 Uncharacterized protein conserved in bacteria YP_003975604.1 COG4123 Predicted O-methyltransferase YP_003975605.1 COG2827 Predicted endonuclease containing a URI domain YP_003975606.1 COG0313 Predicted methyltransferases YP_003975607.1 COG2002 Regulators of stationary/sporulation gene expression YP_003975608.1 COG0143 Methionyl-tRNA synthetase YP_003975609.1 COG0084 Mg-dependent DNase YP_003975610.1 COG3583 Uncharacterized protein conserved in bacteria YP_003975611.1 COG1658 Small primase-like proteins (Toprim domain) YP_003975612.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_003975614.1 COG4466 Uncharacterized protein conserved in bacteria YP_003975616.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_003975617.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_003975618.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_003975619.1 COG2088 Uncharacterized protein, involved in the regulation of septum location YP_003975620.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_003975621.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_003975622.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_003975623.1 COG0193 Peptidyl-tRNA hydrolase YP_003975625.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_003975626.1 COG2002 Regulators of stationary/sporulation gene expression YP_003975627.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_003975628.1 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain YP_003975629.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_003975632.1 COG2919 Septum formation initiator YP_003975633.1 COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) YP_003975634.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_003975635.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_003975636.1 COG0515 Serine/threonine protein kinase YP_003975637.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_003975638.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_003975639.1 COG0465 ATP-dependent Zn proteases YP_003975640.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_003975641.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_003975642.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_003975643.1 COG0031 Cysteine synthase YP_003975644.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_003975645.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_003975646.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_003975647.1 COG0294 Dihydropteroate synthase and related enzymes YP_003975648.1 COG1539 Dihydroneopterin aldolase YP_003975649.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_003975650.1 COG1396 Predicted transcriptional regulators YP_003975651.1 COG0042 tRNA-dihydrouridine synthase YP_003975652.1 COG1190 Lysyl-tRNA synthetase (class II) YP_003975653.1 COG4463 Transcriptional repressor of class III stress genes YP_003975654.1 COG3880 Uncharacterized protein with conserved CXXC pairs YP_003975655.1 COG3869 Arginine kinase YP_003975656.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_003975657.1 COG1066 Predicted ATP-dependent serine protease YP_003975658.1 COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) YP_003975659.1 COG4956 Integral membrane protein (PIN domain superfamily) YP_003975660.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_003975661.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_003975662.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_003975663.1 COG1045 Serine acetyltransferase YP_003975664.1 COG0215 Cysteinyl-tRNA synthetase YP_003975665.1 COG1939 Uncharacterized protein conserved in bacteria YP_003975666.1 COG0566 rRNA methylases YP_003975667.1 COG3688 Predicted RNA-binding protein containing a PIN domain YP_003975668.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003975669.1 COG0267 Ribosomal protein L33 YP_003975670.1 COG0690 Preprotein translocase subunit SecE YP_003975671.1 COG0250 Transcription antiterminator YP_003975672.1 COG0080 Ribosomal protein L11 YP_003975673.1 COG0081 Ribosomal protein L1 YP_003975674.1 COG0244 Ribosomal protein L10 YP_003975675.1 COG0222 Ribosomal protein L7/L12 YP_003975676.1 COG2813 16S RNA G1207 methylase RsmC YP_003975677.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_003975678.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_003975679.1 COG1358 Ribosomal protein HS6-type (S12/L30/L7a) YP_003975680.1 COG0048 Ribosomal protein S12 YP_003975681.1 COG0049 Ribosomal protein S7 YP_003975682.1 COG0480 Translation elongation factors (GTPases) YP_003975683.1 COG0050 GTPases - translation elongation factors YP_003975684.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003975685.1 COG0051 Ribosomal protein S10 YP_003975686.1 COG0087 Ribosomal protein L3 YP_003975687.1 COG0088 Ribosomal protein L4 YP_003975688.1 COG0089 Ribosomal protein L23 YP_003975689.1 COG0090 Ribosomal protein L2 YP_003975690.1 COG0185 Ribosomal protein S19 YP_003975691.1 COG0091 Ribosomal protein L22 YP_003975692.1 COG0092 Ribosomal protein S3 YP_003975693.1 COG0197 Ribosomal protein L16/L10E YP_003975694.1 COG0255 Ribosomal protein L29 YP_003975695.1 COG0186 Ribosomal protein S17 YP_003975696.1 COG0093 Ribosomal protein L14 YP_003975697.1 COG0198 Ribosomal protein L24 YP_003975698.1 COG0094 Ribosomal protein L5 YP_003975699.1 COG0199 Ribosomal protein S14 YP_003975700.1 COG0096 Ribosomal protein S8 YP_003975701.1 COG0097 Ribosomal protein L6P/L9E YP_003975702.1 COG0256 Ribosomal protein L18 YP_003975703.1 COG0098 Ribosomal protein S5 YP_003975704.1 COG1841 Ribosomal protein L30/L7E YP_003975705.1 COG0200 Ribosomal protein L15 YP_003975706.1 COG0201 Preprotein translocase subunit SecY YP_003975707.1 COG0563 Adenylate kinase and related kinases YP_003975708.1 COG0024 Methionine aminopeptidase YP_003975709.1 COG2163 Ribosomal protein L14E/L6E/L27E YP_003975710.1 COG0361 Translation initiation factor 1 (IF-1) YP_003975711.1 COG0257 Ribosomal protein L36 YP_003975712.1 COG0099 Ribosomal protein S13 YP_003975713.1 COG0100 Ribosomal protein S11 YP_003975714.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_003975715.1 COG0203 Ribosomal protein L17 YP_003975716.1 COG1122 ABC-type cobalt transport system, ATPase component YP_003975717.1 COG1122 ABC-type cobalt transport system, ATPase component YP_003975718.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters YP_003975719.1 COG0101 Pseudouridylate synthase YP_003975720.1 COG0102 Ribosomal protein L13 YP_003975721.1 COG0103 Ribosomal protein S9 YP_003975722.1 COG0500 SAM-dependent methyltransferases YP_003975724.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_003975725.1 COG0489 ATPases involved in chromosome partitioning YP_003975728.1 COG0726 Predicted xylanase/chitin deacetylase YP_003975729.1 COG0738 Fucose permease YP_003975730.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_003975731.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_003975732.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_003975733.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_003975734.1 COG0385 Predicted Na+-dependent transporter YP_003975735.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_003975736.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003975737.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_003975738.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_003975739.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_003975740.1 COG3876 Uncharacterized protein conserved in bacteria YP_003975741.1 COG1472 Beta-glucosidase-related glycosidases YP_003975743.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_003975745.1 COG1264 Phosphotransferase system IIB components YP_003975746.1 COG1737 Transcriptional regulators YP_003975747.1 COG2103 Predicted sugar phosphate isomerase YP_003975748.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003975749.1 COG1683 Uncharacterized conserved protein YP_003975750.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_003975752.1 COG1624 Uncharacterized conserved protein YP_003975753.1 COG4856 Uncharacterized protein conserved in bacteria YP_003975754.1 COG1109 Phosphomannomutase YP_003975755.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_003975756.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_003975757.1 COG3002 Uncharacterized protein conserved in bacteria YP_003975758.1 COG0288 Carbonic anhydrase YP_003975760.1 COG5609 Uncharacterized conserved protein YP_003975761.1 COG0640 Predicted transcriptional regulators YP_003975762.1 COG2814 Arabinose efflux permease YP_003975763.1 COG1413 FOG: HEAT repeat YP_003975764.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_003975765.1 COG0789 Predicted transcriptional regulators YP_003975766.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003975767.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003975768.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_003975769.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_003975770.1 COG1346 Putative effector of murein hydrolase YP_003975771.1 COG1380 Putative effector of murein hydrolase LrgA YP_003975772.1 COG1846 Transcriptional regulators YP_003975773.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_003975776.1 COG2602 Beta-lactamase class D YP_003975777.1 COG2124 Cytochrome P450 YP_003975779.1 COG0531 Amino acid transporters YP_003975780.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_003975781.1 COG2271 Sugar phosphate permease YP_003975784.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_003975785.1 COG0438 Glycosyltransferase YP_003975786.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_003975788.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_003975789.1 COG0615 Cytidylyltransferase YP_003975792.1 COG2801 Transposase and inactivated derivatives YP_003975794.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_003975796.1 COG0371 Glycerol dehydrogenase and related enzymes YP_003975797.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) YP_003975798.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_003975799.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003975800.1 COG1183 Phosphatidylserine synthase YP_003975801.1 COG0586 Uncharacterized membrane-associated protein YP_003975802.1 COG0688 Phosphatidylserine decarboxylase YP_003975803.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_003975805.1 COG1404 Subtilisin-like serine proteases YP_003975806.1 COG2312 Erythromycin esterase homolog YP_003975807.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_003975808.1 COG1054 Predicted sulfurtransferase YP_003975809.1 COG1301 Na+/H+-dicarboxylate symporters YP_003975810.1 COG2190 Phosphotransferase system IIA components YP_003975811.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_003975812.1 COG2188 Transcriptional regulators YP_003975813.1 COG5658 Predicted integral membrane protein YP_003975814.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_003975815.1 COG0833 Amino acid transporters YP_003975816.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_003975817.1 COG1115 Na+/alanine symporter YP_003975818.1 COG2066 Glutaminase YP_003975819.1 COG0642 Signal transduction histidine kinase YP_003975820.1 COG0784 FOG: CheY-like receiver YP_003975821.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_003975822.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003975823.1 COG0477 Permeases of the major facilitator superfamily YP_003975824.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_003975825.1 COG2186 Transcriptional regulators YP_003975826.1 COG2721 Altronate dehydratase YP_003975828.1 COG3173 Predicted aminoglycoside phosphotransferase YP_003975829.1 COG3696 Putative silver efflux pump YP_003975830.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_003975831.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_003975832.1 COG0642 Signal transduction histidine kinase YP_003975833.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003975834.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_003975835.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_003975837.1 COG4826 Serine protease inhibitor YP_003975838.1 COG3773 Cell wall hydrolyses involved in spore germination YP_003975839.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_003975840.1 COG1826 Sec-independent protein secretion pathway components YP_003975841.1 COG0805 Sec-independent protein secretion pathway component TatC YP_003975842.1 COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) YP_003975843.1 COG0520 Selenocysteine lyase YP_003975844.1 COG0477 Permeases of the major facilitator superfamily YP_003975845.1 COG1309 Transcriptional regulator YP_003975846.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_003975847.1 COG1405 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB YP_003975848.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_003975851.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_003975853.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_003975854.1 COG0457 FOG: TPR repeat YP_003975855.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003975856.1 COG0366 Glycosidases YP_003975857.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_003975858.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_003975859.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_003975860.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_003975861.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_003975862.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_003975863.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_003975864.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_003975865.1 COG2301 Citrate lyase beta subunit YP_003975867.1 COG1358 Ribosomal protein HS6-type (S12/L30/L7a) YP_003975868.1 COG0561 Predicted hydrolases of the HAD superfamily YP_003975869.1 COG0308 Aminopeptidase N YP_003975870.1 COG3853 Uncharacterized protein involved in tellurite resistance YP_003975871.1 COG0477 Permeases of the major facilitator superfamily YP_003975873.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_003975874.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_003975875.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_003975876.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_003975877.1 COG1288 Predicted membrane protein YP_003975879.1 COG0039 Malate/lactate dehydrogenases YP_003975880.1 COG1620 L-lactate permease YP_003975881.1 COG0477 Permeases of the major facilitator superfamily YP_003975882.1 COG1846 Transcriptional regulators YP_003975883.1 COG1280 Putative threonine efflux protein YP_003975884.1 COG3403 Uncharacterized conserved protein YP_003975885.1 COG0833 Amino acid transporters YP_003975886.1 COG3665 Uncharacterized conserved protein YP_003975887.1 COG0171 NAD synthase YP_003975889.1 COG1082 Sugar phosphate isomerases/epimerases YP_003975890.1 COG0703 Shikimate kinase YP_003975892.1 COG3458 Acetyl esterase (deacetylase) YP_003975893.1 COG3541 Predicted nucleotidyltransferase YP_003975894.1 COG0506 Proline dehydrogenase YP_003975895.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003975896.1 COG0591 Na+/proline symporter YP_003975898.1 COG2508 Regulator of polyketide synthase expression YP_003975900.1 COG4652 Uncharacterized protein conserved in bacteria YP_003975901.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_003975902.1 COG3689 Predicted membrane protein YP_003975903.1 COG0701 Predicted permeases YP_003975904.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003975905.1 COG0492 Thioredoxin reductase YP_003975906.1 COG0007 Uroporphyrinogen-III methylase YP_003975907.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_003975908.1 COG1251 NAD(P)H-nitrite reductase YP_003975909.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_003975910.1 COG1251 NAD(P)H-nitrite reductase YP_003975911.1 COG2223 Nitrate/nitrite transporter YP_003975912.1 COG1469 Uncharacterized conserved protein YP_003975913.1 COG1376 Uncharacterized protein conserved in bacteria YP_003975914.1 COG0523 Putative GTPases (G3E family) YP_003975915.1 COG0765 ABC-type amino acid transport system, permease component YP_003975916.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_003975917.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_003975918.1 COG1714 Predicted membrane protein/domain YP_003975920.1 COG1846 Transcriptional regulators YP_003975922.1 COG3910 Predicted ATPase YP_003975923.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_003975926.1 COG0840 Methyl-accepting chemotaxis protein YP_003975927.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_003975928.1 COG0269 3-hexulose-6-phosphate synthase and related proteins YP_003975929.1 COG1733 Predicted transcriptional regulators YP_003975931.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003975932.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003975933.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_003975934.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_003975935.1 COG2764 Uncharacterized protein conserved in bacteria YP_003975936.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_003975937.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_003975938.1 COG2091 Phosphopantetheinyl transferase YP_003975939.1 COG2364 Predicted membrane protein YP_003975940.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_003975941.1 COG0765 ABC-type amino acid transport system, permease component YP_003975942.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_003975943.1 COG0583 Transcriptional regulator YP_003975944.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_003975945.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_003975948.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_003975949.1 COG3104 Dipeptide/tripeptide permease YP_003975950.1 COG5434 Endopolygalacturonase YP_003975953.1 COG0372 Citrate synthase YP_003975955.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_003975956.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_003975957.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_003975958.1 COG0765 ABC-type amino acid transport system, permease component YP_003975959.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_003975960.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_003975961.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_003975963.1 COG0457 FOG: TPR repeat YP_003975965.1 COG0527 Aspartokinases YP_003975966.1 COG4606 ABC-type enterochelin transport system, permease component YP_003975967.1 COG4605 ABC-type enterochelin transport system, permease component YP_003975968.1 COG4604 ABC-type enterochelin transport system, ATPase component YP_003975969.1 COG4607 ABC-type enterochelin transport system, periplasmic component YP_003975970.1 COG0477 Permeases of the major facilitator superfamily YP_003975971.1 COG1309 Transcriptional regulator YP_003975973.1 COG0457 FOG: TPR repeat YP_003975974.1 COG0778 Nitroreductase YP_003975975.1 COG1359 Uncharacterized conserved protein YP_003975976.1 COG0640 Predicted transcriptional regulators YP_003975977.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_003975978.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_003975979.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_003975980.1 COG4975 Putative glucose uptake permease YP_003975981.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003975982.1 COG4549 Uncharacterized protein conserved in bacteria YP_003975983.1 COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC YP_003975984.1 COG1349 Transcriptional regulators of sugar metabolism YP_003975986.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component YP_003975987.1 COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain YP_003975988.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_003975989.1 COG0412 Dienelactone hydrolase and related enzymes YP_003975990.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_003975991.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_003975993.1 COG0561 Predicted hydrolases of the HAD superfamily YP_003975994.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_003975995.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_003975996.1 COG4336 Uncharacterized conserved protein YP_003975997.1 COG2049 Allophanate hydrolase subunit 1 YP_003975998.1 COG1984 Allophanate hydrolase subunit 2 YP_003975999.1 COG1414 Transcriptional regulator YP_003976000.1 COG2755 Lysophospholipase L1 and related esterases YP_003976003.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_003976004.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_003976005.1 COG4989 Predicted oxidoreductase YP_003976006.1 COG3711 Transcriptional antiterminator YP_003976007.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_003976008.1 COG0500 SAM-dependent methyltransferases YP_003976009.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003976010.1 COG3822 ABC-type sugar transport system, auxiliary component YP_003976011.1 COG3871 Uncharacterized stress protein (general stress protein 26) YP_003976016.1 COG1476 Predicted transcriptional regulators YP_003976017.1 COG1522 Transcriptional regulators YP_003976018.1 COG0550 Topoisomerase IA YP_003976020.1 COG2199 FOG: GGDEF domain YP_003976021.1 COG5298 Uncharacterized protein conserved in bacteria YP_003976022.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_003976024.1 COG0531 Amino acid transporters YP_003976025.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_003976026.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_003976028.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_003976029.1 COG2261 Predicted membrane protein YP_003976030.1 COG4876 Uncharacterized protein conserved in bacteria YP_003976032.1 COG3729 General stress protein YP_003976033.1 COG0662 Mannose-6-phosphate isomerase YP_003976035.1 COG3546 Mn-containing catalase YP_003976036.1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component YP_003976037.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_003976038.1 COG4565 Response regulator of citrate/malate metabolism YP_003976039.1 COG1301 Na+/H+-dicarboxylate symporters YP_003976040.1 COG0628 Predicted permease YP_003976041.1 COG1131 ABC-type multidrug transport system, ATPase component YP_003976042.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_003976043.1 COG3421 Uncharacterized protein conserved in bacteria YP_003976044.1 COG1960 Acyl-CoA dehydrogenases YP_003976047.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_003976048.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_003976049.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_003976050.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_003976052.1 COG0513 Superfamily II DNA and RNA helicases YP_003976053.1 COG3402 Uncharacterized conserved protein YP_003976054.1 COG3428 Predicted membrane protein YP_003976055.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_003976056.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_003976057.1 COG2834 Outer membrane lipoprotein-sorting protein YP_003976058.1 COG0787 Alanine racemase YP_003976059.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_003976060.1 COG2337 Growth inhibitor YP_003976061.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003976062.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003976063.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_003976064.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_003976065.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003976066.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_003976067.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_003976068.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_003976069.1 COG2183 Transcriptional accessory protein YP_003976071.1 COG3091 Uncharacterized protein conserved in bacteria YP_003976072.1 COG0582 Integrase YP_003976073.1 COG2856 Predicted Zn peptidase YP_003976074.1 COG1396 Predicted transcriptional regulators