-- dump date 20140618_211950 -- class Genbank::CDS -- table cds_note -- id note YP_016342.2 identified by match to PFAM protein family HMM PF00078 YP_016366.2 identified by match to PFAM protein family HMM PF00078 YP_016368.2 identified by match to PFAM protein family HMM PF01909 YP_016378.2 identified by match to PFAM protein family HMM PF01909 YP_016379.2 identified by match to PFAM protein family HMM PF00440 YP_016385.2 identified by match to PFAM protein family HMM PF00583 YP_016386.2 identified by match to PFAM protein family HMM PF01609 YP_016387.2 identified by match to PFAM protein family HMM PF01609 YP_016391.2 identified by match to PFAM protein family HMM PF01381 YP_016395.2 identified by match to PFAM protein family HMM PF02534 YP_016410.2 identified by match to PFAM protein family HMM PF00395 YP_016416.2 identified by match to PFAM protein family HMM PF00437 YP_016417.2 similar to GP:4894276; identified by sequence similarity; putative YP_016447.2 identified by match to PFAM protein family HMM PF02517 YP_016448.2 similar to GP:4894302; identified by sequence similarity; putative YP_016455.2 identified by match to PFAM protein family HMM PF00395 YP_016456.2 identified by match to PFAM protein family HMM PF01569 YP_016460.2 identified by match to PFAM protein family HMM PF00483 YP_016461.2 identified by match to PFAM protein family HMM PF00984 YP_016473.2 similar to GB:M23179 SP:P40136 GB:M24074 PID:142813 PID:142815; identified by sequence similarity; putative YP_016476.2 similar to GB:U00089 SP:P75428 PID:1674177; identified by sequence similarity; putative YP_016485.2 identified by match to PFAM protein family HMM PF01526 YP_016486.2 identified by match to PFAM protein family HMM PF00239 YP_016488.2 identified by match to PFAM protein family HMM PF03323 YP_016489.2 similar to SP:Q9ZFB3; identified by sequence similarity; putative YP_016495.2 similar to SP:P13423; identified by sequence similarity; putative YP_016497.2 identified by match to PFAM protein family HMM PF01022 YP_016502.2 similar to GB:D01097 SP:Q03091 PID:216246; identified by sequence similarity; putative YP_016503.2 similar to GB:M29081 SP:P15917 GB:M30210 PID:143142 PID:143144; identified by sequence similarity; putative YP_016509.2 similar to GB:D26185 SP:P08874 GB:M26917 GB:X12820 GB:X61953; identified by sequence similarity; putative YP_022446.1 identified by match to PFAM protein family HMM PF00589 YP_022457.1 similar to GP:4894344; identified by sequence similarity; putative YP_022458.1 similar to GP:4894346; identified by sequence similarity; putative YP_022461.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerS YP_022468.1 identified by match to PFAM protein family HMM PF01022 YP_022469.1 identified by match to PFAM protein family HMM PF02600 YP_022472.1 identified by match to PFAM protein family HMM PF00565 YP_022474.1 identified by match to PFAM protein family HMM PF01131 YP_022477.1 similar to OMNI:NTL01HS00010; identified by sequence similarity; putative YP_016517.2 identified by match to PFAM protein family HMM PF00877 YP_016526.2 similar to GP:6470168; identified by sequence similarity; putative YP_016533.2 identified by match to PFAM protein family HMM PF00437 YP_016549.2 similar to GP:4884028; identified by sequence similarity; putative YP_016550.2 identified by match to PFAM protein family HMM PF00991 YP_016555.2 identified by match to PFAM protein family HMM PF00395 YP_016563.2 identified by match to PFAM protein family HMM PF02517 YP_016565.2 identified by match to PFAM protein family HMM PF00440 YP_016573.2 identified by match to PFAM protein family HMM PF01019 YP_016574.2 similar to SP:P19579; identified by sequence similarity; putative YP_016575.2 similar to GB:M24150 SP:P19581 PID:142632; identified by sequence similarity; putative YP_016579.2 identified by match to PFAM protein family HMM PF01022 YP_016583.2 identified by match to PFAM protein family HMM PF00461 YP_016588.2 identified by match to PFAM protein family HMM PF01810 YP_016594.2 similar to GB:U02535 PID:408467; identified by sequence similarity; putative YP_016595.2 similar to GP:15024531; identified by sequence similarity; putative YP_016598.2 identified by match to PFAM protein family HMM PF02517 YP_016599.2 identified by match to PFAM protein family HMM PF00496 YP_022426.1 identified by match to PFAM protein family HMM PF00817 YP_022429.1 similar to GB:NC_002183; identified by sequence similarity; putative YP_022432.1 identified by match to PFAM protein family HMM PF00589 YP_022434.1 identified by match to PFAM protein family HMM PF02517 YP_016604.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_016605.1 binds the polymerase to DNA and acts as a sliding clamp YP_016606.2 'similar to GB:M21535, GB:M17254, GB:X85347, GB:X88004, SP:P11308, PID:182185, PID:182187, GB:M21535, GB:M17254, GB:X85347, GB:X88004, SP:P11308, PID:182185, and PID:182187; identified by sequence similarity' YP_016607.1 'Required for DNA replication; binds preferentially to single-stranded, linear DNA' YP_016608.1 negatively supercoils closed circular double-stranded DNA YP_016609.1 negatively supercoils closed circular double-stranded DNA YP_016613.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_016614.1 'similar to GB:Y00636, GB:X06296, SP:P19256, PID:34347, PID:34350, PID:540515, GB:Y00636, GB:X06296, SP:P19256, PID:34347, PID:34350, and PID:540515; identified by sequence similarity' YP_016615.1 'with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate' YP_016616.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate YP_016617.1 'catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA' YP_016618.1 identified by match to PFAM protein family HMM PF02796 YP_016619.1 identified by match to PFAM protein family HMM PF01712 YP_016620.1 'similar to GB:M27717, GB:M73716, GB:M73717, GB:M73718, GB:M73719, GB:M73720, GB:S40234, SP:P15088, PID:179934, and PID:187442; identified by sequence similarity' YP_016621.1 identified by match to PFAM protein family HMM PF00857 YP_016622.1 'similar to GB:X15145, SP:P26998, and PID:1340164; identified by sequence similarity' YP_016623.1 'catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA' YP_016624.1 'similar to GB:M93283, SP:P54315, PID:187230, GB:M93283, SP:P54315, and PID:187230; identified by sequence similarity' YP_016625.1 'involved in a recombinational process of DNA repair, independent of the recBC complex' YP_016626.1 'similar to GB:X17622, SP:P17658, PID:32033, GB:X17622, SP:P17658, and PID:32033; identified by sequence similarity' YP_016627.1 'similar to SP:P24282, GB:X07282, SP:P10826, PID:184477, PID:32026, and PID:35883; identified by sequence similarity' YP_016631.1 similar to SP:P21885; identified by sequence similarity YP_016632.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_016633.2 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA YP_016635.2 in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA YP_016636.1 'similar to GB:Z11584, GB:Z11583, GB:Z14227, GB:Z14229, GB:Z14228, GB:Z11584, GB:Z11583, GB:Z14227, GB:Z14229, and GB:Z14228; identified by sequence similarity' YP_016637.1 'similar to SP:P24178, GB:X57403, PID:41233, GB:U00096, PID:1788815, SP:P24178, GB:X57403, PID:41233, GB:U00096, and PID:1788815; identified by sequence similarity' YP_016638.1 identified by match to PFAM protein family HMM PF00590 YP_016639.1 'similar to GB:X15722, SP:P00390, PID:31825, GB:X15722, SP:P00390, and PID:31825; identified by sequence similarity' YP_016640.2 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_016641.1 identified by match to PFAM protein family HMM PF01026 YP_016642.1 'similar to GB:X70991, PID:1206027, and PID:38460; identified by sequence similarity' YP_016643.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_016644.1 'similar to GB:L11931, GB:L23928, SP:P34896, PID:438634, GB:L11931, GB:L23928, SP:P34896, and PID:438634; identified by sequence similarity' YP_016645.1 'similar to GB:M16342, GB:M16342, GB:D28382, GB:M29063, SP:P07910, PID:337455, GB:M16342, GB:M16342, GB:D28382, GB:M29063, SP:P07910, PID:337455, GB:M16342, GB:M16342, GB:D28382, GB:M29063, SP:P07910, PID:337455, GB:M16342, GB:M16342, GB:D28382, GB:M29063, SP:P07910, and PID:337455; identified by sequence similarity' YP_016646.2 'similar to GB:X16832, GB:X07549, SP:P09668, PID:29708, PID:29710, GB:D16217, GB:M86258, GB:S73329, GB:U38525, GB:M28227, GB:M28228, GB:M28229, GB:M28230, GB:M86249, GB:M86250, GB:M86252, GB:M86253, GB:M86256, GB:M86257, GB:M86255, GB:M86254, GB:M86251, GB:U26724, GB:M33328, SP:P20810, PID:179873, PID:2301416, and PID:951315; identified by sequence similarity' YP_016647.2 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_016648.1 'similar to SP:P37551, GB:X69117, SP:P35626, and PID:312395; identified by sequence similarity' YP_016649.1 identified by match to PFAM protein family HMM PF01042 YP_016650.2 'stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus' YP_016651.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis YP_016652.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_016653.2 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_016655.1 'similar to GB:S53911, GB:M81939, GB:M81940, GB:M81941, GB:M81942, GB:M81944, GB:M81945, SP:P28906, and PID:409019; identified by sequence similarity' YP_016656.1 'similar to GB:X66364, SP:Q00535, and PID:36621; identified by sequence similarity' YP_016657.1 'similar to SP:Q00758, GB:M83308, SP:Q02221, PID:180946, and PID:2138178; identified by sequence similarity' YP_016658.2 identified by match to PFAM protein family HMM PF04007 YP_016659.1 'similar to GB:M97796, SP:Q02363, PID:184552, and PID:471126; identified by sequence similarity' YP_016660.2 'similar to GB:M27717, GB:M73716, GB:M73717, GB:M73718, GB:M73719, GB:M73720, GB:S40234, SP:P15088, PID:179934, and PID:187442; identified by sequence similarity' YP_016663.1 'similar to GB:X66533, SP:Q02153, PID:31686, GB:X66533, SP:Q02153, and PID:31686; identified by sequence similarity' YP_016664.1 similar to SP:P37475; identified by sequence similarity YP_016665.1 'similar to GP:16412680, and GP:467456; identified by sequence similarity' YP_016666.2 'Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively' YP_016667.1 'similar to GB:M27132, GB:M19483, GB:M19482, GB:X03559, GB:D00022, GB:X05606, SP:P06576, PID:179279, PID:179281, PID:219654, PID:28931, and PID:28940; identified by sequence similarity' YP_016668.2 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_016669.1 'becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers' YP_016670.1 similar to SP:P37887; identified by sequence similarity YP_016671.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine YP_016672.1 amphibolic enzyme subunit from Bacillus subtilis performs both in anthranilate and para-aminobenzoate synthesis YP_016673.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate YP_016674.1 identified by match to PFAM protein family HMM PF03599 YP_016675.2 similar to SP:P28823; identified by sequence similarity YP_016676.1 'similar to SP:P29252, GB:M26066, GB:M59719, GB:M59720, GB:M59721, GB:M59722, GB:M59723, GB:M59724, GB:M59725, GB:M59726, GB:M59727, GB:M59728, GB:M59729, GB:M59730, GB:M59731, GB:M59732, GB:M59733, GB:M59734, GB:M59735, GB:M59736, GB:M59737, GB:M59738, GB:M59739, GB:M59740, GB:M59741, GB:Y00698, GB:M35042, GB:M36003, GB:J05533, GB:S70308, SP:P08237, PID:189857, PID:553610, and PID:975290; identified by sequence similarity' YP_016677.1 'similar to SP:P24178, GB:X57403, PID:41233, GB:U00096, and PID:1788815; identified by sequence similarity' YP_016678.1 'similar to GB:X16302, SP:P18065, PID:179477, PID:306926, PID:33010, and PID:412023; identified by sequence similarity' YP_016679.1 'class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1' YP_016682.1 'similar to SP:P37568, GB:M25108, SP:P05106, and PID:386833; identified by sequence similarity' YP_016683.1 'similar to GB:X16983, SP:P13612, PID:33946, PID:903744, GB:X16983, SP:P13612, PID:33946, and PID:903744; identified by sequence similarity' YP_016684.1 identified by match to PFAM protein family HMM PF00217 YP_016685.1 'similar to SP:P37571, GB:J05272, SP:P20839, and PID:307067; identified by sequence similarity' YP_016686.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_016687.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_016688.1 identified by match to PFAM protein family HMM PF01850 YP_016689.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers YP_016690.1 'catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate' YP_016691.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_016692.1 'similar to SP:Q06750, GB:Z26653, GB:M59832, SP:P24043, PID:1661108, PID:187521, and PID:438056; identified by sequence similarity' YP_016693.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_016694.1 'similar to GP:14246298, and GP:2632362; identified by sequence similarity' YP_016695.1 similar to SP:Q06753; identified by sequence similarity YP_016696.1 'similar to GB:M93143, SP:P00747, SP:Q02325, PID:190072, PID:190350, PID:2323519, PID:641446, GB:M93143, SP:P00747, SP:Q02325, PID:190072, PID:190350, PID:2323519, and PID:641446; identified by sequence similarity' YP_016697.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_022517.1 'in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif' YP_016698.1 'forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force' YP_016699.2 Modulates Rho-dependent transcription termination YP_016700.2 binds directly to 23S ribosomal RNA YP_016701.1 'in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA' YP_016703.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_016704.1 'present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors' YP_016705.1 'similar to GB:X52966, SP:P18077, PID:1154855, PID:34201, GB:X52966, SP:P18077, PID:1154855, and PID:34201; identified by sequence similarity' YP_052605.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_016708.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_016709.2 similar to SP:P46350; identified by sequence similarity YP_016710.1 'interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance' YP_016711.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_016712.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_016713.1 'EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu' YP_016714.1 'NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex' YP_016715.1 'binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin' YP_016716.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_016717.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_016718.1 'one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation' YP_016719.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_016720.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_016721.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_016722.2 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_016723.1 one of the stabilizing components for the large ribosomal subunit YP_016724.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_016725.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_016726.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_016727.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_016728.2 'located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif' YP_016729.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_016730.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_016731.1 binds 5S rRNA along with protein L5 and L25 YP_016732.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_016733.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_016734.1 late assembly protein YP_016735.2 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_016736.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_016737.1 'catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn' YP_016738.1 'stimulates the activities of the other two initiation factors, IF-2 and IF-3' YP_016739.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_016740.1 'located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA' YP_016741.1 'located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3' YP_016742.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_016743.1 is a component of the macrolide binding site in the peptidyl transferase center YP_016744.2 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene YP_016745.1 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene YP_016746.1 'similar to SP:P27000, and PID:48242; identified by sequence similarity' YP_016748.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_016749.1 forms a direct contact with the tRNA during translation YP_016751.1 'similar to GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, PID:488129, GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, and PID:488129; identified by sequence similarity' YP_016752.1 'similar to GB:X14787, GB:U12471, GB:M99425, GB:X04665, GB:J04835, GB:M25631, SP:P07996, and PID:532688; identified by sequence similarity' YP_016753.1 'similar to GB:Y00971, SP:P09329, SP:P11908, SP:P21108, PID:2160402, and PID:35700; identified by sequence similarity' YP_016754.1 'similar to SP:P16449, GB:M74179, GB:M74178, SP:P26927, PID:1311661, PID:183977, and PID:398038; identified by sequence similarity' YP_016755.1 'similar to GB:X73637, SP:P51460, and PID:498831; identified by sequence similarity' YP_016761.1 'similar to GB:S43855, SP:P35243, GB:AB001838, and PID:1902890; identified by sequence similarity' YP_016762.1 'similar to SP:P29576, SP:P29575, SP:P29576, and SP:P29575; identified by sequence similarity' YP_016763.1 'similar to SP:P29576, SP:P29575, SP:P29576, and SP:P29575; identified by sequence similarity' YP_016764.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_016765.1 'Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source' YP_016766.2 'similar to SP:P21502, GB:X51662, PID:41810, GB:U00096, PID:1778450, and PID:1786747; identified by sequence similarity' YP_016767.1 'similar to GB:X02160, GB:L07782, GB:A18657, GB:M29929, GB:M29930, SP:P06213, PID:186468, PID:186472, PID:186474, PID:307070, PID:33973, PID:386830, PID:463119, PID:512462, PID:553512, and PID:553515; identified by sequence similarity' YP_016770.1 'similar to GB:M35878, GB:M31159, GB:X64875, GB:S56205, GB:M36121, SP:P17936, PID:183116, PID:386791, PID:398164, GB:X02160, GB:L07782, GB:A18657, GB:M29929, GB:M29930, SP:P06213, PID:186468, PID:186472, PID:186474, PID:307070, PID:33973, PID:386830, PID:463119, PID:512462, PID:553512, and PID:553515; identified by sequence similarity' YP_016771.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_016772.1 'similar to SP:P28816, GB:J01830, and PID:154849; identified by sequence similarity' YP_016773.1 similar to GP:22775861; identified by sequence similarity YP_016774.1 identified by match to PFAM protein family HMM PF04173 YP_016776.1 identified by match to PFAM protein family HMM PF00776 YP_016782.1 similar to GP:16412740; identified by sequence similarity YP_016783.1 similar to GP:16409649; identified by sequence similarity YP_016784.1 'similar to GP:16409650, and GP:17984003; identified by sequence similarity' YP_016785.1 identified by match to PFAM protein family HMM PF02882 YP_016786.1 identified by match to PFAM protein family HMM PF03032 YP_016787.1 'similar to SP:P33014, GB:U00009, PID:405955, GB:U00096, and PID:1788322; identified by sequence similarity' YP_016788.1 identified by match to TIGR protein family HMM TIGR00880 YP_016790.1 similar to SP:P00212; identified by sequence similarity YP_016793.1 'similar to GB:K02765, SP:P01024, PID:179665, PID:181130, GB:K02765, SP:P01024, PID:179665, and PID:181130; identified by sequence similarity' YP_016794.1 'similar to GB:M77349, SP:Q15582, PID:339568, GB:L05628, GB:X78338, SP:P33527, PID:1835659, and PID:1871200; identified by sequence similarity' YP_016795.1 'similar to GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_016796.1 similar to SP:P24137; identified by sequence similarity YP_016797.1 'similar to GB:J03925, GB:J04145, GB:S52228, SP:P11215, PID:307114, PID:307148, and PID:386975; identified by sequence similarity' YP_016798.1 'similar to SP:P37022, and PID:1786322; identified by sequence similarity' YP_016799.1 'similar to GP:3599654, SP:P13971, GB:X05813, and PID:42644; identified by sequence similarity' YP_016801.1 'similar to GP:6470217, and GP:10717143; identified by sequence similarity' YP_016802.1 'similar to GP:6470217, and GP:10717143; identified by sequence similarity' YP_016803.1 'similar to SP:P07999, SP:P39482, SP:P40288, GB:J04805, and PID:142975; identified by sequence similarity' YP_016806.1 'similar to GB:X51630, GB:X61631, GB:S60755, GB:S60756, GB:S61513, GB:S61515, GB:S61522, GB:S61524, GB:S61945, GB:X72314, GB:X72323, SP:P19544, PID:312850, PID:340380, PID:37978, PID:458432, and PID:825731; identified by sequence similarity' YP_016807.1 similar to SP:P29444; identified by sequence similarity YP_016809.1 identified by match to TIGR protein family HMM TIGR00974 YP_016814.2 'similar to GP:15025004, GP:2832791, SP:P33929, PID:405924, GB:U00096, and PID:1788527; identified by sequence similarity' YP_016817.1 'similar to SP:P94501, and SP:P32820; identified by sequence similarity' YP_016818.2 'similar to SP:O07086, and SP:P32820; identified by sequence similarity' YP_016820.1 similar to SP:P80259; identified by sequence similarity YP_016823.1 'similar to GP:16415415, and GP:16415415; identified by sequence similarity' YP_016824.1 'similar to SP:P31861, and SP:P31861; identified by sequence similarity' YP_016825.1 'similar to GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, and PID:691763; identified by sequence similari' YP_016826.1 'similar to GB:L10960, GB:L10960, GB:L10962, GB:L10962, GB:L10961, GB:L10961, PID:425416, PID:425418, PID:425420, PID:425456, PID:432196, GB:L10960, GB:L10960, GB:L10962, GB:L10962, GB:L10961, GB:L10961, PID:425416, PID:425418, PID:425420, PID:425456, and PID:432196; identified by sequence similarity' YP_016827.1 'similar to GP:1881239, and GP:1881239; identified by sequence similarity' YP_016828.1 'similar to GB:L18927, SP:Q08889, and PID:349618; identified by sequence similarity' YP_016834.1 identified by match to TIGR protein family HMM TIGR01193 YP_016837.1 'similar to GP:15026248, GB:L22519, GB:L22520, GB:L22521, GB:L22522, GB:L22523, GB:L22524, SP:P09237, PID:348021, PID:35799, and PID:35803; identified by sequence similarity' YP_016838.2 'similar to GP:15026249, GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_016839.1 similar to GP:15026250; identified by sequence similarity YP_016840.1 'similar to GP:15026251, GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_016841.1 'similar to GP:15023010, GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_016846.1 identified by match to TIGR protein family HMM TIGR00068 YP_016847.1 similar to GP:13872767; identified by sequence similarity YP_016848.1 identified by match to PFAM protein family HMM PF04209 YP_016849.1 'similar to GP:16414326, and GP:16414326; identified by sequence similarity' YP_016852.1 'similar to SP:P28079, GB:X63903, and PID:48099; identified by sequence similarity' YP_016853.1 'similar to SP:P19433, GB:X55500, and PID:288287; identified by sequence similarity' YP_016854.1 identified by match to PFAM protein family HMM PF03851 YP_016855.1 'similar to SP:P19433, GB:X55500, and PID:288287; identified by sequence similarity' YP_016856.1 'Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids' YP_016857.1 'similar to SP:P12254, GB:M19299, GB:M21657, GB:M23103, PID:1217887, PID:143638, PID:143642, PID:143644, PID:455127, PID:1303719, PID:1303780, GB:AL009126, SP:P12254, GB:M19299, GB:M21657, GB:M23103, PID:1217887, PID:143638, PID:143642, PID:143644, PID:455127, PID:1303719, PID:1303780, and GB:AL009126; identified by sequence similarity' YP_016858.1 similar to SP:P10724; identified by sequence similarity YP_016860.2 identified by match to PFAM protein family HMM PF02452 YP_016861.1 'similar to SP:P22566, GB:X55665, and PID:45461; identified by sequence similarity' YP_016863.1 'similar to SP:P22566, GB:X55665, PID:45461, SP:P22566, GB:X55665, and PID:45461; identified by sequence similarity' YP_016866.1 identified by match to TIGR protein family HMM TIGR00150 YP_016867.1 similar to SP:P05974; identified by sequence similarity YP_016868.2 similar to SP:P09453; identified by sequence similarity YP_016869.1 'in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity' YP_016871.2 similar to SP:P05974; identified by sequence similarity YP_016872.1 modulates transcription in response to the NADH/NAD(+) redox state YP_022525.1 'similar to SP:P00547, PID:529240, PID:537246, GB:U00096, and PID:1786184; identified by sequence similarity' YP_022526.1 identified by match to PFAM protein family HMM PF02517 YP_016874.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_016876.1 '60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth' YP_016877.2 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_016878.1 identified by match to PFAM protein family HMM PF03390 YP_016879.1 'similar to GP:15023431, and GP:15023431; identified by sequence similarity' YP_016880.1 'similar to GP:15023432, and GP:15023432; identified by sequence similarity' YP_016883.1 identified by match to TIGR protein family HMM TIGR00091 YP_016889.1 'similar to GB:Z11697, GB:S53354, SP:Q01151, and PID:32028; identified by sequence similarity' YP_016893.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell YP_016894.1 'similar to GP:9801976, and SP:P42333; identified by sequence similarity' YP_016895.1 'similar to SP:P42332, GB:D16217, GB:M86258, GB:S73329, GB:U38525, GB:M28227, GB:M28228, GB:M28229, GB:M28230, GB:M86249, GB:M86250, GB:M86252, GB:M86253, GB:M86256, GB:M86257, GB:M86255, GB:M86254, GB:M86251, GB:U26724, GB:M33328, SP:P20810, PID:179873, PID:2301416, and PID:951315; identified by sequence similarity' YP_016896.3 'similar to GP:4481748, and GP:10173433; identified by sequence similarity' YP_016897.1 similar to GP:4481749; identified by sequence similarity YP_016900.1 Catalyzes a step in the de novo purine nucleotide biosynthetic pathway YP_016901.2 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_016902.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_016903.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_016904.1 'With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway' YP_016905.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_016906.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_016907.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_016908.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_016909.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate YP_016910.1 involved in de novo purine biosynthesis YP_016911.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_016912.1 identified by match to PFAM protein family HMM PF03869 YP_016913.1 identified by match to PFAM protein family HMM PF01145 YP_016915.3 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer YP_016916.1 identified by match to TIGR protein family HMM TIGR01074 YP_052606.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB YP_016919.1 'similar to SP:P37063, GB:X72001, GB:X73296, SP:P37063, GB:X72001, and GB:X73296; identified by sequence similarity' YP_016920.1 identified by match to PFAM protein family HMM PF03741 YP_016921.1 catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate YP_016923.1 similar to SP:P00778; identified by sequence similarity YP_016925.1 similar to GP:16409649; identified by sequence similarity YP_016927.1 similar to GP:12544492; identified by sequence similarity YP_016928.1 identified by match to PFAM protein family HMM PF03180 YP_016932.1 similar to GP:10175694; identified by sequence similarity YP_016934.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain YP_052607.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_016937.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_016938.1 similar to YegS from E. coli YP_016939.1 identified by match to TIGR protein family HMM TIGR01662 YP_016941.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate YP_016942.1 similar to GP:10173607; identified by sequence similarity YP_016943.2 identified by match to TIGR protein family HMM TIGR01804 YP_016944.1 'similar to GP:12024949, SP:P31631, GB:M62363, and PID:150518; identified by sequence similarity' YP_016945.1 'similar to SP:P39762, GB:S61764, GB:X59434, SP:P25325, and PID:432376; identified by sequence similarity' YP_016946.1 similar to GP:15023291; identified by sequence similarity YP_016947.1 similar to GP:15025323; identified by sequence similarity YP_016948.1 'similar to GP:16503634, GB:X54150, SP:P24071, PID:1054737, and PID:31330; identified by sequence similarity' YP_016949.1 'similar to SP:P21504, GB:U00096, and PID:1788960; identified by sequence similarity' YP_016950.1 'similar to SP:Q05373, PID:49227, SP:Q05373, and PID:49227; identified by sequence similarity' YP_016952.2 'similar to GP:15979249, and GP:15979249; identified by sequence similarity' YP_016953.1 identified by match to PFAM protein family HMM PF01863 YP_016954.1 similar to GP:22776251; identified by sequence similarity YP_016955.1 identified by match to PFAM protein family HMM PF02746 YP_016957.1 similar to PIR:A41594; identified by sequence similarity YP_016958.1 'similar to GP:1323764, and SP:P54983; identified by sequence similarity' YP_016959.1 similar to GP:15622504; identified by sequence similarity YP_016960.1 'similar to GB:M23613, GB:J02590, GB:M31004, GB:M26697, GB:M28699, GB:X16934, SP:P06748, PID:189272, PID:189312, PID:190240, PID:557546, PID:609342, PID:825671, GB:M89470, GB:L25597, SP:Q02962, PID:438650, and PID:553607; identified by sequence similarity' YP_016961.1 'similar to GP:8927563, GB:U07663, GB:U07664, SP:P50219, and PID:507425; identified by sequence similarity' YP_016962.1 related protein from Bacillus subtilis functions as methylribose kinase and functions in salvage pathway YP_016963.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway YP_016964.1 catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate YP_016965.1 'similar to GP:15023675, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_016966.1 'similar to GP:15023676, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_016967.1 similar to GP:15023677; identified by sequence similarity YP_016968.1 identified by match to TIGR protein family HMM TIGR01813 YP_016970.1 'similar to SP:P35646, GB:Z12609, and PID:41331; identified by sequence similarity' YP_016975.1 'similar to SP:P11866, GB:X14430, GB:X16445, PID:581237, PID:581238, PID:606060, GB:U00096, PID:1789507, SP:P11866, GB:X14430, GB:X16445, PID:581237, PID:581238, PID:606060, GB:U00096, and PID:1789507; identified by sequence similarity' YP_016976.1 identified by match to PFAM protein family HMM PF03435 YP_016980.1 'similar to SP:P35877, PID:217135, SP:P35877, and PID:217135; identified by sequence similarity' YP_016981.1 identified by match to TIGR protein family HMM TIGR00176 YP_016982.1 'similar to SP:P31973, PID:154536, SP:P31973, and PID:154536; identified by sequence similarity' YP_016983.1 similar to GP:7542440; identified by sequence similarity YP_016984.1 'similar to SP:P14027, GB:X15972, and PID:44789; identified by sequence similarity' YP_016985.1 identified by match to PFAM protein family HMM PF00487 YP_016988.1 'similar to GP:10174080, and SP:P27675; identified by sequence similarity' YP_016989.1 'similar to GP:16410112, and GP:16410112; identified by sequence similarity' YP_016990.1 'similar to GB:M34570, GB:X15882, GB:X15977, GB:M34572, GB:M34573, GB:M34571, PID:179709, PID:179711, PID:179713, and PID:30045; identified by sequence similarity' YP_016991.1 'similar to SP:P21332, and GB:U04997; identified by sequence similarity' YP_016992.1 identified by match to TIGR protein family HMM TIGR00907 YP_016993.1 identified by match to PFAM protein family HMM PF03372 YP_016994.1 'similar to GP:16413093, and GP:16413093; identified by sequence similarity' YP_016995.1 decatenates replicating daughter chromosomes YP_016996.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP YP_016997.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate YP_016998.2 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB YP_016999.1 identified by match to PFAM protein family HMM PF00672 YP_017000.1 'similar to GP:15024336, and GP:15024336; identified by sequence similarity' YP_017001.1 'similar to GP:15024337, and GP:15024337; identified by sequence similarity' YP_017002.1 'similar to GP:15024338, GB:Z25795, SP:P39122, PID:397489, PID:2293137, and GB:AL009126; identified by sequence similarity' YP_017003.1 'similar to GP:15024339, and GP:15024339; identified by sequence similarity' YP_017004.1 similar to GP:15026421; identified by sequence similarity YP_017005.1 similar to GP:16326733; identified by sequence similarity YP_017007.1 'similar to SP:P38100, PID:1750387, SP:P38100, and PID:1750387; identified by sequence similarity' YP_017009.1 'similar to GP:17943283, and GP:17943283; identified by sequence similarity' YP_017010.1 similar to GP:2632224; identified by sequence similarity YP_017011.2 identified by match to PFAM protein family HMM PF01381 YP_052608.1 similar to GP:6983869; identified by sequence similarity YP_017013.1 'similar to GB:M14059, GB:M15801, GB:M10905, GB:X02761, GB:M14060, GB:A14133, GB:X04530, GB:K00055, GB:K00799, GB:M27589, GB:M12549, SP:P02751, PID:182704, and PID:553295; identified by sequence similarity' YP_017014.1 similar to GP:16413930; identified by sequence similarity YP_017015.2 'similar to SP:P27712, GB:M62504, and PID:551983; identified by sequence similarity' YP_017016.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_017017.1 identified by match to TIGR protein family HMM TIGR01167 YP_017018.1 identified by match to PFAM protein family HMM PF00370 YP_017019.1 'similar to SP:P32698, PID:396391, GB:U00096, and PID:1790491; identified by sequence similarity' YP_017020.1 similar to SP:P33162; identified by sequence similarity YP_017021.1 similar to SP:P33162; identified by sequence similarity YP_017022.1 'similar to SP:O34447, and SP:P33162; identified by sequence similarity' YP_017023.1 'similar to SP:P33162, and SP:P33162; identified by sequence similarity' YP_017024.1 'similar to SP:P33162, GB:U14003, SP:P39390, PID:537182, GB:U00096, and PID:1790798; identified by sequence similarity' YP_017025.1 identified by match to TIGR protein family HMM TIGR01657 YP_017027.1 similar to SP:P23340; identified by sequence similarity YP_017028.2 'similar to SP:P23340, and SP:P23340; identified by sequence similarity' YP_017029.1 similar to GP:4584097; identified by sequence similarity YP_017031.1 identified by match to TIGR protein family HMM TIGR01670 YP_017033.1 'similar to GP:15025821, and SP:O32256; identified by sequence similarity' YP_017035.1 'similar to GP:7301806, and GP:7301806; identified by sequence similarity' YP_017038.1 identified by match to PFAM protein family HMM PF04253 YP_017039.1 identified by match to PFAM protein family HMM PF00597 YP_017040.1 'similar to GP:15980666, and SP:P29939; identified by sequence similarity' YP_017043.1 'similar to SP:P32687, PID:409796, GB:U00096, PID:1790459, SP:P32687, PID:409796, GB:U00096, and PID:1790459; identified by sequence similarity' YP_017044.1 identified by match to PFAM protein family HMM PF03609 YP_017045.2 'similar to SP:Q05372, and PID:49219; identified by sequence similarity' YP_017046.1 'similar to GP:10173504, and GP:10173504; identified by sequence similarity' YP_017047.1 'similar to SP:Q05372, PID:49219, SP:Q05372, and PID:49219; identified by sequence similarity' YP_017048.1 'similar to SP:Q04718, GB:X04741, SP:P09936, and PID:35440; identified by sequence similarity' YP_017049.1 'similar to GP:4584141, and GP:4584141; identified by sequence similarity' YP_017052.1 'similar to SP:Q05373, and PID:49227; identified by sequence similarity' YP_017053.1 identified by match to PFAM protein family HMM PF00589 YP_022528.1 identified by match to PFAM protein family HMM PF01381 YP_017054.1 similar to GP:6470186; identified by sequence similarity YP_017057.1 'similar to GB:X59932, SP:P41240, PID:30256, and PID:30315; identified by sequence similarity' YP_017058.1 similar to GP:17132056; identified by sequence similarity YP_017060.1 identified by match to TIGR protein family HMM TIGR01764 YP_017062.1 similar to GP:12829835; identified by sequence similarity YP_017063.1 'similar to GP:15024913, GB:J03278, GB:M30493, SP:P09619, PID:189730, PID:189732, PID:2107947, and PID:532593; identified by sequence similarity' YP_017065.1 similar to GP:16414921; identified by sequence similarity YP_017066.1 similar to GP:5730276; identified by sequence similarity YP_017067.1 'similar to GP:15281706, and GP:15281706; identified by sequence similarity' YP_017070.1 similar to GP:13491646; identified by sequence similarity YP_017079.1 identified by match to TIGR protein family HMM TIGR01637 YP_022533.1 similar to GP:17402464; identified by sequence similarity YP_017083.1 identified by match to TIGR protein family HMM TIGR01764 YP_017086.1 identified by match to PFAM protein family HMM PF03354 YP_017088.1 identified by match to TIGR protein family HMM TIGR01543 YP_017089.1 similar to GP:17428700; identified by sequence similarity YP_022534.1 identified by match to TIGR protein family HMM TIGR01560 YP_017091.1 'similar to GP:16415096, and GP:16415096; identified by sequence similarity' YP_017092.1 'similar to GP:16415095, and GP:16415095; identified by sequence similarity' YP_022535.1 'similar to GP:16415094, and GP:16415094; identified by sequence similarity' YP_017093.2 similar to GP:16415093; identified by sequence similarity YP_017094.1 'similar to GP:16415092, and GP:16415092; identified by sequence similarity'; similar to GP:12724001; identified by sequence similarity YP_017096.1 similar to GP:16415090; identified by sequence similarity YP_017097.1 identified by match to TIGR protein family HMM TIGR01633 YP_017100.1 similar to GP:456319; identified by sequence similarity YP_017104.1 similar to GP:1865711; identified by sequence similarity YP_017107.1 'similar to SP:P38022, GB:M11220, GB:M10663, GB:M11734, GB:M13207, GB:X03021, SP:P04141, PID:181146, PID:181148, PID:181150, PID:183364, PID:2297274, and PID:31859; identified by sequence similarity' YP_017108.1 'Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism' YP_017110.1 'similar to GB:L05606, GB:L05607, GB:L14786, GB:U27266, PID:292341, PID:974541, GB:L05606, GB:L05607, GB:L14786, GB:U27266, PID:292341, and PID:974541; identified by sequence similarity' YP_017111.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_017112.1 identified by match to PFAM protein family HMM PF01381 YP_017114.1 'similar to GP:15022957, and GP:15022957; identified by sequence similarity' YP_017117.1 catalyzes the formation of glutamate from glutamine YP_017119.1 identified by match to PFAM protein family HMM PF04211 YP_017120.1 'similar to SP:P05343, GB:X12600, PID:43830, PID:43879, PID:149343, SP:P05343, GB:X12600, PID:43830, PID:43879, and PID:149343; identified by sequence similarity' YP_022539.1 identified by match to PFAM protein family HMM PF00535 YP_017126.1 similar to GP:15023681; identified by sequence similarity YP_017127.1 identified by match to PFAM protein family HMM PF00535 YP_017128.1 identified by match to PFAM protein family HMM PF02901 YP_017129.1 'similar to GP:4914622, and SP:P09374; identified by sequence similarity' YP_017130.1 'processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids' YP_017133.2 identified by match to TIGR protein family HMM TIGR00857 YP_017134.1 'similar to SP:P38387, and PID:466811; identified by sequence similarity' YP_017135.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities YP_017136.2 'similar to SP:P38387, PID:466811, SP:P38387, and PID:466811; identified by sequence similarity' YP_017138.1 SASP K; found in the forespore compartment YP_017140.1 'similar to SP:P25921, and PID:150653; identified by sequence similarity' YP_017141.1 'similar to SP:P25921, and PID:150653; identified by sequence similarity' YP_017142.1 'similar to SP:P25921, and PID:150653; identified by sequence similarity' YP_017143.1 identified by match to PFAM protein family HMM PF04259 YP_017144.1 'similar to SP:P11959, PID:40044, SP:P11959, and PID:40044; identified by sequence similarity' YP_017145.1 identified by match to PFAM protein family HMM PF04167 YP_017146.1 'similar to SP:P11959, and PID:40044; identified by sequence similarity' YP_017147.1 'similar to SP:P11959, PID:40044, SP:P11959, and PID:40044; identified by sequence similarity' YP_052609.1 'similar to GP:15981479, and SP:P09831; identified by sequence similarity' YP_017150.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate YP_017151.1 identified by match to TIGR protein family HMM TIGR01187 YP_017153.1 identified by match to PFAM protein family HMM PF03741 YP_017154.1 'similar to GB:X05196, GB:X07292, SP:P09972, PID:28599, PID:312137, GB:X05196, GB:X07292, SP:P09972, PID:28599, and PID:312137; identified by sequence similarity' YP_017156.1 'similar to GB:M26665, GB:M18372, GB:L05514, SP:P15515, SP:P15516, PID:179466, PID:184058, and PID:292146; identified by sequence similarity' YP_017157.2 'similar to GP:16414294, SP:P11959, and PID:40044; identified by sequence similarity' YP_017158.1 similar to GP:7007449; identified by sequence similarity YP_017163.1 'similar to SP:Q05375, PID:49228, SP:Q05375, and PID:49228; identified by sequence similarity' YP_017164.1 'similar to SP:P37861, GB:U05680, PID:468036, GB:K03192, and PID:181322; identified by sequence similarity' YP_017165.1 'similar to GB:U06074, PID:476228, SP:P50183, GB:X58377, GB:M57765, SP:P20809, PID:186273, and PID:22953; identified by sequence similarity' YP_017166.1 'similar to GP:2635861, SP:P09123, and PID:452398; identified by sequence similarity' YP_017167.1 identified by match to PFAM protein family HMM PF03130 YP_017169.1 similar to GP:1381681; identified by sequence similarity YP_017170.1 similar to GP:6759486; identified by sequence similarity YP_017172.1 'similar to GB:M93143, SP:P00747, SP:Q02325, PID:190072, PID:190350, PID:2323519, and PID:641446; identified by sequence similarity' YP_017173.1 'similar to GB:X73039, SP:P35715, SP:P35717, SP:P48431, PID:312152, PID:854182, PID:938229, PID:938234, GB:X73039, SP:P35715, SP:P35717, SP:P48431, PID:312152, PID:854182, PID:938229, and PID:938234; identified by sequence similarity' YP_017174.1 'similar to SP:P25146, and SP:P25146; identified by sequence similarity' YP_017175.1 identified by match to PFAM protein family HMM PF00583 YP_017176.1 identified by match to PFAM protein family HMM PF03606 YP_017177.1 'similar to GP:4760825, and SP:P43153; identified by sequence similarity' YP_017178.1 'similar to SP:P14707, GB:X15942, PID:46875, SP:P14707, GB:X15942, and PID:46875; identified by sequence similarity' YP_017179.1 'similar to SP:P20628, PID:142038, SP:P20628, and PID:142038; identified by sequence similarity' YP_017180.1 'similar to GB:Z14244, SP:P24311, PID:30151, GB:Z14244, SP:P24311, and PID:30151; identified by sequence similarity' YP_017181.1 identified by match to PFAM protein family HMM PF00989 YP_017184.1 'similar to GB:M14059, GB:M15801, GB:M10905, GB:X02761, GB:M14060, GB:A14133, GB:X04530, GB:K00055, GB:K00799, GB:M27589, GB:M12549, SP:P02751, PID:182704, PID:553295, GB:M14059, GB:M15801, GB:M10905, GB:X02761, GB:M14060, GB:A14133, GB:X04530, GB:K00055, GB:K00799, GB:M27589, GB:M12549, SP:P02751, PID:182704, and PID:553295; identified by sequence similarity' YP_017185.1 'Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism' YP_017187.3 identified by match to PFAM protein family HMM PF00023 YP_017188.1 identified by match to PFAM protein family HMM PF04309 YP_017189.1 similar to SP:P10907; identified by sequence similarity YP_017190.1 similar to GP:10173692; identified by sequence similarity YP_017191.1 identified by match to PFAM protein family HMM PF00528 YP_017192.1 identified by match to PFAM protein family HMM PF01547 YP_017193.1 'similar to GP:9789454, and GP:16410044; identified by sequence similarity' YP_017194.1 similar to GP:4104695; identified by sequence similarity YP_017195.2 'similar to GP:17134690, and GP:17134690; identified by sequence similarity' YP_017197.2 'similar to GP:16410113, SP:P07114, GB:S96966, GB:X04830, and PID:42533; identified by sequence similarity' YP_017198.1 'similar to GB:Z14244, SP:P24311, PID:30151, GB:Z14244, SP:P24311, and PID:30151; identified by sequence similarity' YP_017199.1 C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration YP_017200.1 'similar to GP:1934810, SP:P26908, PID:40173, and GB:AL009126; identified by sequence similarity' YP_017201.1 'similar to GP:1146122, SP:P15300, GB:X14135, PID:42079, GB:U00096, PID:1651280, PID:1651286, and PID:1786892; identified by sequence similarity' YP_017203.1 'similar to GP:10173012, and GP:10173012; identified by sequence similarity' YP_017205.1 identified by match to PFAM protein family HMM PF04173 YP_017206.1 identified by match to TIGR protein family HMM TIGR01141 YP_017207.1 similar to GP:13752435; identified by sequence similarity YP_017208.1 similar to GP:3687664; identified by sequence similarity YP_017209.1 'similar to GP:3687663, and GP:3687663; identified by sequence similarity' YP_017211.1 similar to GP:13752435; identified by sequence similarity YP_017212.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth YP_017213.1 similar to GP:1934609; identified by sequence similarity YP_017217.1 similar to GP:16413065; identified by sequence similarity YP_017218.1 identified by match to PFAM protein family HMM PF02882 YP_017219.2 'similar to GP:6759463, and GP:6759463; identified by sequence similarity' YP_017220.1 similar to GP:15025242; identified by sequence similarity YP_017221.1 'similar to SP:P09123, and PID:452398; identified by sequence similarity' YP_017223.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_017224.1 'similar to GP:12655807, and GP:12655807; identified by sequence similarity' YP_017226.1 'similar to SP:P05806, GB:Z22651, GB:L04696, GB:M63454, GB:L04695, GB:L11604, GB:L11666, GB:L19937, GB:L22027, GB:L32862, GB:M32319, GB:M33573, GB:M58636, GB:M75138, GB:M81798, GB:M84381, GB:M84385, GB:U03859, GB:U06862, GB:U11265, GB:U17107, GB:U30904, GB:X61708, GB:Z15143, GB:D50292, GB:D50293, GB:D50294, GB:D50299, GB:L36979, GB:M22786, GB:M22789, GB:M22793, GB:M22796, GB:M28109, GB:M28110, GB:M28111, GB:M28112, GB:M68964, GB:M86403, GB:X87268, GB:X83401, GB:U50710, GB:U49902, GB:U49898, GB:U49900, GB:X96533, GB:L75941, GB:L76094, GB:L75942, GB:L41925, GB:D44500, GB:U70529, GB:U59965, GB:U52173, GB:U52177, GB:U52167, GB:U52171, GB:U76392, GB:U76393, GB:U76390, GB:U76391, SP:P01889, SP:P10318, SP:P10319, SP:P10320, SP:P18463, SP:P19373, SP:P30464, SP:P30465, SP:P30466, SP:P30468, SP:P30469, SP:P30470, SP:P30471, SP:P30472, SP:P30473, SP:P30474, SP:P30477, SP:P30478, SP:P30479, SP:P30480, SP:P30481, SP:P30482, SP:P30483, SP:P30484, SP:P30485, SP:P30488, SP:P30489, SP:P30491, SP:P30492, SP:P30493, SP:P30494' YP_017228.1 identified by match to PFAM protein family HMM PF03334 YP_017229.1 identified by match to TIGR protein family HMM TIGR01742 YP_017231.1 'similar to GP:15023569, and GP:15023569; identified by sequence similarity' YP_017232.2 similar to GP:16412006; identified by sequence similarity YP_017233.1 similar to GP:1408507; identified by sequence similarity YP_017234.1 'similar to GP:17133605, and GP:17133605; identified by sequence similarity' YP_017235.1 'similar to SP:P80259, and SP:P80259; identified by sequence similarity' YP_017236.1 catalyzes the formation of fumarate from aspartate YP_017237.1 'similar to GB:M74493, GB:M33384, GB:M74491, SP:P16587, SP:P32889, PID:178160, PID:178162, and PID:178981; identified by sequence similarity' YP_017238.1 'similar to GP:4894353, and GP:14022747; identified by sequence similarity' YP_017239.3 SASP H; spore coat; expressed in forespore compartment YP_017240.1 'similar to GP:15023634, SP:P37786, and PID:454907; identified by sequence similarity' YP_017241.1 'similar to SP:P21324, PID:145151, and SP:P80176; identified by sequence similarity' YP_017243.1 'similar to SP:P21324, PID:145151, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_017244.1 'similar to SP:P30772, PID:581339, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_017245.1 'similar to GB:M15841, SP:P08579, PID:340105, SP:P37022, and PID:1786322; identified by sequence similarity' YP_017246.1 'similar to GB:U03100, GB:D14705, GB:L22080, GB:D13866, SP:P35221, PID:1172426, PID:347316, PID:404105, and PID:433411; identified by sequence similarity' YP_017247.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_017248.1 identified by match to TIGR protein family HMM TIGR01746 YP_017249.1 'similar to GP:16411856, GB:U14973, SP:P30054, PID:1220361, and PID:550027; identified by sequence similarity' YP_017250.1 'similar to SP:P06626, GB:U01159, GB:K01147, PID:148642, PID:398512, SP:P06626, GB:U01159, GB:K01147, PID:148642, and PID:398512; identified by sequence similarity' YP_017251.1 'similar to SP:P06626, GB:U01159, GB:K01147, PID:148642, and PID:398512; identified by sequence similarity' YP_017253.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) YP_017256.1 identified by match to TIGR protein family HMM TIGR01686 YP_017257.1 'similar to SP:P80103, and SP:P80103; identified by sequence similarity' YP_017258.1 similar to GP:11127689; identified by sequence similarity YP_017259.1 similar to GP:11127690; identified by sequence similarity YP_017260.1 similar to GP:8096681; identified by sequence similarity YP_017261.1 'similar to GB:M80324, and PID:144511; identified by sequence similarity' YP_017262.1 similar to GP:14531043; identified by sequence similarity YP_017263.1 similar to GP:14994336; identified by sequence similarity YP_017264.1 identified by match to PFAM protein family HMM PF02517 YP_017265.1 'similar to SP:P37063, GB:X72001, GB:X73296, SP:P37063, GB:X72001, and GB:X73296; identified by sequence similarity' YP_017266.2 similar to SP:P19663; identified by sequence similarity YP_017267.2 'similar to SP:P27675, GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, and PID:488129; identified by sequence similarity' YP_017268.1 'similar to GB:D14661, PID:285947, GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, and PID:488129; identified by sequence similarity' YP_017269.2 'similar to GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, PID:488129, GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, and PID:488129; identified by sequence similarity' YP_017270.1 'similar to GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, PID:488129, GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, and PID:488129; identified by sequence similarity' YP_017271.1 'similar to GB:L05606, GB:L05607, GB:L14786, GB:U27266, PID:292341, PID:974541, GB:L05606, GB:L05607, GB:L14786, GB:U27266, PID:292341, and PID:974541; identified by sequence similarity' YP_017272.1 identified by match to PFAM protein family HMM PF02566 YP_017273.1 identified by match to PFAM protein family HMM PF01230 YP_017274.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_017277.1 'similar to GP:15024442, and SP:Q60034; identified by sequence similarity' YP_017278.1 'similar to GP:3687664, and GP:3687664; identified by sequence similarity' YP_017279.1 'similar to GP:3687663, and GP:3687663; identified by sequence similarity' YP_017282.2 identified by match to PFAM protein family HMM PF03594 YP_017283.1 identified by match to PFAM protein family HMM PF00582 YP_017285.1 identified by match to PFAM protein family HMM PF00496 YP_017286.1 'similar to GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_017287.1 'similar to GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_017288.1 similar to SP:Q07734; identified by sequence similarity YP_017290.1 identified by match to PFAM protein family HMM PF03825 YP_017291.1 'similar to SP:P08115, SP:P03065, GB:X02166, PID:46547, and PID:46631; identified by sequence similarity' YP_017294.1 similar to SP:P36944; identified by sequence similarity YP_017295.1 'similar to GB:L11672, GB:M61871, SP:P17031, SP:P17040, SP:Q05481, PID:186774, PID:930083, and PID:930092; identified by sequence similarity' YP_017296.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source YP_017297.2 similar to GP:10176354; identified by sequence similarity YP_017298.1 'similar to GB:J04183, SP:P13473, PID:2340103, PID:307110, and PID:704463; identified by sequence similarity' YP_017299.1 identified by match to PFAM protein family HMM PF00532 YP_017300.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_017301.1 'similar to GP:16226177, and GP:16226177; identified by sequence similarity' YP_017302.1 'similar to SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, PID:1789987, SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, and PID:1789987; identified by sequence similarity' YP_017303.1 identified by match to PFAM protein family HMM PF03137 YP_017304.1 identified by match to TIGR protein family HMM TIGR01751 YP_017305.1 'similar to GP:14475603, and GP:14475603; identified by sequence similarity' YP_017306.1 'similar to SP:P09598, GB:Z22651, GB:L04696, GB:M63454, GB:L04695, GB:L11604, GB:L11666, GB:L19937, GB:L22027, GB:L32862, GB:M32319, GB:M33573, GB:M58636, GB:M75138, GB:M81798, GB:M84381, GB:M84385, GB:U03859, GB:U06862, GB:U11265, GB:U17107, GB:U30904, GB:X61708, GB:Z15143, GB:D50292, GB:D50293, GB:D50294, GB:D50299, GB:L36979, GB:M22786, GB:M22789, GB:M22793, GB:M22796, GB:M28109, GB:M28110, GB:M28111, GB:M28112, GB:M68964, GB:M86403, GB:X87268, GB:X83401, GB:U50710, GB:U49902, GB:U49898, GB:U49900, GB:X96533, GB:L75941, GB:L76094, GB:L75942, GB:L41925, GB:D44500, GB:U70529, GB:U59965, GB:U52173, GB:U52177, GB:U52167, GB:U52171, GB:U76392, GB:U76393, GB:U76390, GB:U76391, SP:P01889, SP:P10318, SP:P10319, SP:P10320, SP:P18463, SP:P19373, SP:P30464, SP:P30465, SP:P30466, SP:P30468, SP:P30469, SP:P30470, SP:P30471, SP:P30472, SP:P30473, SP:P30474, SP:P30477, SP:P30478, SP:P30479, SP:P30480, SP:P30481, SP:P30482, SP:P30483, SP:P30484, SP:P30485, SP:P30488, SP:P30489, SP:P30491, SP:P30492, SP:P30493, SP:P30494' YP_017307.2 'similar to GB:Z22651, GB:L04696, GB:M63454, GB:L04695, GB:L11604, GB:L11666, GB:L19937, GB:L22027, GB:L32862, GB:M32319, GB:M33573, GB:M58636, GB:M75138, GB:M81798, GB:M84381, GB:M84385, GB:U03859, GB:U06862, GB:U11265, GB:U17107, GB:U30904, GB:X61708, GB:Z15143, GB:D50292, GB:D50293, GB:D50294, GB:D50299, GB:L36979, GB:M22786, GB:M22789, GB:M22793, GB:M22796, GB:M28109, GB:M28110, GB:M28111, GB:M28112, GB:M68964, GB:M86403, GB:X87268, GB:X83401, GB:U50710, GB:U49902, GB:U49898, GB:U49900, GB:X96533, GB:L75941, GB:L76094, GB:L75942, GB:L41925, GB:D44500, GB:U70529, GB:U59965, GB:U52173, GB:U52177, GB:U52167, GB:U52171, GB:U76392, GB:U76393, GB:U76390, GB:U76391, SP:P01889, SP:P10318, SP:P10319, SP:P10320, SP:P18463, SP:P19373, SP:P30464, SP:P30465, SP:P30466, SP:P30468, SP:P30469, SP:P30470, SP:P30471, SP:P30472, SP:P30473, SP:P30474, SP:P30477, SP:P30478, SP:P30479, SP:P30480, SP:P30481, SP:P30482, SP:P30483, SP:P30484, SP:P30485, SP:P30488, SP:P30489, SP:P30491, SP:P30492, SP:P30493, SP:P30494, SP:P30495' YP_017308.1 'similar to SP:P02928, GB:M12627, GB:J01648, GB:M12637, GB:V00303, GB:X03923, PID:146734, SP:P02928, GB:M12627, GB:J01648, GB:M12637, GB:V00303, GB:X03923, and PID:146734; identified by sequence similarity' YP_017309.1 'similar to SP:P02928, GB:M12633, GB:J01648, GB:M12637, GB:V00303, GB:X03923, and PID:146748; identified by sequence similarity' YP_017312.1 phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell YP_017313.1 identified by match to PFAM protein family HMM PF03357 YP_017314.1 identified by match to PFAM protein family HMM PF03562 YP_017315.2 similar to SP:P22705; identified by sequence similarity YP_017316.1 identified by match to PFAM protein family HMM PF03733 YP_017317.3 similar to GP:16410331; identified by sequence similarity YP_017318.1 'similar to GP:15023634, and GP:15023634; identified by sequence similarity' YP_022540.1 'similar to SP:P13954, GB:Y07536, PID:46552, and PID:46749; identified by sequence similarity' YP_017321.1 similar to GP:15979707; identified by sequence similarity YP_017323.1 'similar to SP:P06173, GB:M38311, PID:154355, PID:47919, SP:P27506, and PID:43908; identified by sequence similarity' YP_017324.1 'similar to SP:P24178, GB:X57403, PID:41233, GB:U00096, and PID:1788815; identified by sequence similarity' YP_017325.1 identified by match to PFAM protein family HMM PF01381 YP_017327.1 similar to SP:P23916; identified by sequence similarity YP_017329.1 'similar to SP:P11556, GB:X15025, and PID:41509; identified by sequence similarity' YP_017330.1 'similar to SP:P34959, GB:X02747, GB:M15656, GB:M15657, GB:K01177, GB:X00270, SP:P05062, PID:178353, PID:178357, PID:2160383, PID:28420, PID:28617, and PID:563884; identified by sequence similarity' YP_017331.1 identified by match to PFAM protein family HMM PF00510 YP_017332.1 'similar to GB:M31776, GB:M25296, SP:P16860, PID:179515, and PID:189079; identified by sequence similarity' YP_017333.1 'similar to GP:16412434, and SP:P34957; identified by sequence similarity' YP_017334.1 'similar to GB:M77349, SP:Q15582, and PID:339568; identified by sequence similarity' YP_017335.1 'similar to SP:P07114, GB:S96966, GB:X04830, PID:42533, SP:P07114, GB:S96966, GB:X04830, and PID:42533; identified by sequence similarity' YP_017337.1 'similar to SP:P37749, GB:U03041, GB:U09876, PID:508244, PID:510255, GB:U00096, PID:1788346, SP:P37749, GB:U03041, GB:U09876, PID:508244, PID:510255, GB:U00096, and PID:1788346; identified by sequence similarity' YP_017338.1 'similar to GP:14587067, and GP:14587067; identified by sequence similarity' YP_017339.1 similar to GP:14587068; identified by sequence similarity YP_017340.2 similar to GP:14587069; identified by sequence similarity YP_017341.1 similar to GP:14587070; identified by sequence similarity YP_017345.1 identified by match to PFAM protein family HMM PF04023 YP_017346.1 similar to GP:15024670; identified by sequence similarity YP_017347.1 similar to GP:15024671; identified by sequence similarity YP_017348.1 similar to GP:15024672; identified by sequence similarity YP_017349.1 'similar to GB:Z27500, SP:P01619, SP:P01620, SP:P01621, SP:P01622, SP:P01623, SP:P01624, SP:P04207, SP:P04434, SP:P06311, SP:P18135, SP:P18136, PID:415381, PID:470554, PID:470556, PID:470558, PID:470560, PID:470562, PID:470564, PID:470566, PID:470568, PID:470570, PID:470572, PID:470574, PID:470576, PID:470578, PID:470580, PID:470582, PID:470584, PID:470586, PID:470588, PID:470590, PID:470592, PID:470596, PID:470598, PID:470600, PID:470618, PID:470620, PID:470622, PID:470624, PID:470626, PID:470628, PID:506421, PID:510838, PID:510840, PID:510842, PID:510844, PID:510846, PID:511004, PID:515958, PID:515959, PID:553478, PID:553486, PID:560766, PID:560844, PID:561640, PID:561703, PID:561708, PID:561709, PID:563651, PID:567140, PID:567142, PID:567152, PID:567160, PID:567164, PID:575229, PID:587346, PID:587348, PID:587350, PID:587352, PID:587354, PID:619431, PID:619433, PID:619600, PID:619606, PID:619617, PID:619618, PID:619621, PID:619622, PID:619761, PID:619762, PID:619767, PID:619768, PID:619769, PID:681900, PID:' YP_017350.1 'similar to SP:P21504, GB:U00096, PID:1788960, SP:P21504, GB:U00096, and PID:1788960; identified by sequence similarity' YP_017353.1 identified by match to PFAM protein family HMM PF00571 YP_017354.1 identified by match to PFAM protein family HMM PF03139 YP_017356.1 'similar to GB:U12978, and PID:532731; identified by sequence similarity' YP_017357.1 identified by match to PFAM protein family HMM PF01551 YP_017358.1 similar to SP:P25052; identified by sequence similarity YP_017359.1 similar to GP:15024339; identified by sequence similarity YP_017360.2 identified by match to PFAM protein family HMM PF04247 YP_017361.1 identified by match to PFAM protein family HMM PF03180 YP_017362.1 regulates the production of extracellular enzymes YP_017363.1 'similar to SP:P11556, GB:X15025, PID:41509, SP:P11556, GB:X15025, and PID:41509; identified by sequence similarity' YP_017364.1 'with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate' YP_017365.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_017366.1 catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways YP_017367.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine YP_017371.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_017372.1 'One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions' YP_017373.1 'one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex' YP_017374.2 similar to GP:6635817; identified by sequence similarity YP_017375.1 'similar to SP:Q05370, PID:49224, SP:Q05370, and PID:49224; identified by sequence similarity' YP_017376.1 similar to GP:15023647; identified by sequence similarity YP_017377.1 similar to GP:15025441; identified by sequence similarity YP_017379.1 'similar to SP:P24178, GB:X57403, PID:41233, GB:U00096, and PID:1788815; identified by sequence similarity' YP_017380.1 identified by match to TIGR protein family HMM TIGR01832 YP_017383.1 'similar to GB:M74044, SP:P27032, and PID:148392; identified by sequence similarity' YP_017384.1 'similar to GP:4091873, and GP:4091873; identified by sequence similarity' YP_017385.1 'similar to GB:X59841, SP:P40426, and PID:35315; identified by sequence similarity' YP_017386.1 similar to GP:47926; identified by sequence similarity YP_017387.1 similar to SP:P74892; identified by sequence similarity YP_017389.1 similar to GP:10174560; identified by sequence similarity YP_017390.1 similar to SP:Q9KBI6; identified by sequence similarity YP_017391.1 'similar to SP:P21879, GB:X55669, PID:39959, PID:467399, GB:AL009126, SP:P21879, GB:X55669, PID:39959, PID:467399, and GB:AL009126; identified by sequence similarity' YP_017395.1 similar to GP:6090937; identified by sequence similarity YP_017396.1 identified by match to PFAM protein family HMM PF03096 YP_017399.1 similar to GP:10172916; identified by sequence similarity YP_017400.1 identified by match to PFAM protein family HMM PF04293 YP_017403.1 similar to GP:5531446; identified by sequence similarity YP_052610.1 similar to GP:15980957; identified by sequence similarity YP_017410.1 'similar to GP:6332750, and GP:6332750; identified by sequence similarity' YP_017411.1 'similar to GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, PID:507429, GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity' YP_017412.1 'similar to GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity' YP_017413.1 'similar to GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, PID:507429, GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity' YP_017414.1 'similar to GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity' YP_017417.1 'similar to GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity' YP_017419.1 similar to GP:16412006; identified by sequence similarity YP_017420.1 identified by match to TIGR protein family HMM TIGR01830 YP_017421.2 identified by match to PFAM protein family HMM PF04253 YP_017422.2 similar to GP:16412326; identified by sequence similarity YP_017424.2 'similar to SP:P46321, GB:M16505, GB:M16505, GB:J04964, GB:M17591, SP:P08842, PID:338514, PID:338565, PID:338607, PID:338608, GB:M16505, GB:M16505, GB:J04964, GB:M17591, SP:P08842, PID:338514, PID:338565, PID:338607, and PID:338608; identified by sequence similarity' YP_017425.1 'similar to SP:P46319, GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, PID:179460, GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, and PID:179460; identified by sequence similarity' YP_017426.1 'similar to GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, PID:179460, GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, and PID:179460; identified by sequence similarity' YP_017427.1 similar to SP:P46317; identified by sequence similarity YP_017431.1 'similar to SP:P16574, GB:X58355, PID:39353, GB:X16560, SP:P15954, and PID:30155; identified by sequence similarity' YP_017432.2 similar to GP:17743610; identified by sequence similarity YP_017433.1 'similar to SP:P27369, and PID:154510; identified by sequence similarity' YP_017434.1 'similar to SP:P20900, and SP:P20900; identified by sequence similarity' YP_017436.1 'similar to GB:L08485, SP:P31644, PID:1247500, PID:182916, and PID:2232140; identified by sequence similarity' YP_017440.1 'similar to SP:P13954, GB:Y07536, PID:46552, and PID:46749; identified by sequence similarity' YP_017441.1 'similar to SP:P27712, GB:M62504, PID:551983, SP:P27712, GB:M62504, and PID:551983; identified by sequence similarity' YP_017442.1 'similar to SP:P27712, GB:M62504, PID:551983, SP:P27712, GB:M62504, and PID:551983; identified by sequence similarity' YP_017443.1 'similar to SP:Q05375, PID:49228, SP:Q05375, and PID:49228; identified by sequence similarity' YP_017444.1 identified by match to PFAM protein family HMM PF00903 YP_017446.1 identified by match to PFAM protein family HMM PF02735 YP_017447.1 'similar to GP:10173075, and GP:10173075; identified by sequence similarity' YP_017448.1 'similar to SP:P36680, GB:U00096, and PID:1786291; identified by sequence similarity' YP_017452.2 identified by match to PFAM protein family HMM PF03173 YP_022543.1 similar to GP:2224504; identified by sequence similarity YP_017456.1 'similar to GP:2116759, and GP:2116759; identified by sequence similarity' YP_017457.1 similar to GP:9651949; identified by sequence similarity YP_017459.1 identified by match to TIGR protein family HMM TIGR01712 YP_017460.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway YP_017461.1 similar to SP:P08470; identified by sequence similarity YP_017464.1 identified by match to PFAM protein family HMM PF04173 YP_017466.1 similar to GP:22776532; identified by sequence similarity YP_017467.1 similar to SP:P37511; identified by sequence similarity YP_017468.1 'similar to SP:P42179, GB:J04173, SP:P18669, and PID:551174; identified by sequence similarity' YP_017469.1 catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate YP_017470.1 identified by match to PFAM protein family HMM PF00893 YP_017471.1 'similar to SP:P30743, GB:U07663, GB:U07664, SP:P50219, and PID:507425; identified by sequence similarity' YP_017472.1 identified by match to PFAM protein family HMM PF00440 YP_017473.2 'similar to GB:D00761, SP:P20618, and PID:220026; identified by sequence similarity' YP_017474.1 'similar to GB:M24428, GB:M24429, GB:M24430, GB:M24431, GB:M24432, GB:M24433, GB:M24434, GB:M24435, GB:M24436, GB:M24437, GB:M24438, GB:M24439, GB:X14174, GB:S76738, SP:P05186, PID:178462, PID:28738, GB:M24428, GB:M24429, GB:M24430, GB:M24431, GB:M24432, GB:M24433, GB:M24434, GB:M24435, GB:M24436, GB:M24437, GB:M24438, GB:M24439, GB:X14174, GB:S76738, SP:P05186, PID:178462, PID:28738, GB:M24428, GB:M24429, GB:M24430, GB:M24431, GB:M24432, GB:M24433, GB:M24434, GB:M24435, GB:M24436, GB:M24437, GB:M24438, GB:M24439, GB:X14174, GB:S76738, SP:P05186, PID:178462, PID:28738, GB:M24428, GB:M24429, GB:M24430, GB:M24431, GB:M24432, GB:M24433, GB:M24434, GB:M24435, GB:M24436, GB:M24437, GB:M24438, GB:M24439, GB:X14174, GB:S76738, SP:P05186, PID:178462, and PID:28738; identified by sequence similarity' YP_017476.1 identified by match to PFAM protein family HMM PF02525 YP_017477.1 'similar to GP:16414664, and GP:16414664; identified by sequence similarity' YP_017478.1 'similar to GP:16414663, and GP:16414663; identified by sequence similarity' YP_017481.1 'similar to SP:P80876, and SP:P23340; identified by sequence similarity' YP_017482.2 similar to GP:1060858; identified by sequence similarity YP_017483.1 similar to GP:16411684; identified by sequence similarity YP_017484.1 'similar to SP:P80103, GB:M28829, and PID:551976; identified by sequence similarity' YP_017485.1 identified by match to TIGR protein family HMM TIGR00035 YP_017487.1 identified by match to TIGR protein family HMM TIGR01804 YP_022545.1 'similar to SP:P05343, GB:X12600, PID:43830, PID:43879, and PID:149343; identified by sequence similarity' YP_017492.1 similar to SP:P42199; identified by sequence similarity YP_017493.2 'similar to GB:M11953, GB:L10120, GB:X61441, PID:2218035, PID:2275585, PID:292779, PID:338868, PID:37450, PID:553696, PID:553702, PID:975610, and PID:975611; identified by sequence similarity' YP_017494.1 'similar to GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, PID:458555, GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, PID:458555, GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, and PID:458555; identified by sequence similarity' YP_017495.1 similar to GP:3688809; identified by sequence similarity YP_017496.1 'similar to SP:P13989, GB:X17693, PID:43757, SP:P13989, GB:X17693, and PID:43757; identified by sequence similarity' YP_017497.1 'similar to SP:P13989, GB:X17693, PID:43757, SP:P13989, GB:X17693, and PID:43757; identified by sequence similarity' YP_022547.1 'similar to GP:3688818, and GP:3688818; identified by sequence similarity' YP_017500.1 'similar to GP:3688819, and GP:3688819; identified by sequence similarity' YP_017501.1 identified by match to PFAM protein family HMM PF03304 YP_017502.1 'similar to GP:10178299, and GP:10178299; identified by sequence similarity' YP_017503.2 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase YP_017504.1 similar to SP:Q04777; identified by sequence similarity YP_017506.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair YP_017507.1 similar to GP:3688821; identified by sequence similarity YP_017508.1 identified by match to TIGR protein family HMM TIGR01167 YP_017511.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_017512.1 activates fatty acids by binding to coenzyme A YP_017513.1 'similar to GP:16414356, and GP:16414356; identified by sequence similarity' YP_017514.1 'similar to GB:X54201, SP:P39879, and PID:45327; identified by sequence similarity' YP_017518.1 'functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins' YP_017519.2 'similar to GP:7899269, and GP:7899269; identified by sequence similarity' YP_017520.1 'similar to GP:14018318, and GP:14018318; identified by sequence similarity' YP_017521.1 'similar to GB:D21260, GB:X55878, GB:D45298, SP:Q00610, PID:29983, PID:434761, GB:D21260, GB:X55878, GB:D45298, SP:Q00610, PID:29983, and PID:434761; identified by sequence similarity' YP_017522.1 'similar to GB:S64176, GB:Y00525, PID:402807, GB:S64176, GB:Y00525, and PID:402807; identified by sequence similarity' YP_017523.1 'similar to GP:15024517, and GP:7710207; identified by sequence similarity' YP_017524.1 similar to GP:15024516; identified by sequence similarity YP_017525.1 'similar to GB:U08277, GB:U08276, GB:U25638, GB:M63506, GB:U58978, SP:P01911, SP:P01912, SP:P04229, SP:P13758, SP:P13760, PID:1373011, PID:2231538, PID:386938, PID:490048, PID:533431, PID:533433, PID:533464, PID:540444, PID:540448, PID:540450, PID:553341, PID:553342, PID:553345, PID:553577, PID:553578, PID:553580, PID:553583, PID:553585, PID:602463, PID:602465, PID:688440, PID:703086, PID:825607, PID:841154, PID:841156, PID:847881, PID:847947, PID:860984, PID:862604, PID:902552, PID:929629, PID:929993, PID:971165, PID:987615, SP:P12408, and PID:142004; identified by sequence similarity' YP_017528.1 identified by match to PFAM protein family HMM PF03125 YP_017529.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_017530.1 'similar to GP:15025866, and GP:15025866; identified by sequence similarity' YP_017532.1 'similar to SP:P80046, and PID:1478267; identified by sequence similarity' YP_017533.1 similar to SP:Q9RMZ0; identified by sequence similarity YP_017534.2 'similar to GP:15621968, SP:Q02191, and PID:552029; identified by sequence similarity' YP_017535.1 'similar to SP:P37820, PID:396204, SP:P37820, and PID:396204; identified by sequence similarity' YP_017536.1 'similar to GP:6900003, and GP:6900003; identified by sequence similarity' YP_017537.1 catalyzes the formation of L-proline from L-ornithine YP_052612.1 'similar to GP:16412601, GB:L22519, GB:L22520, GB:L22521, GB:L22522, GB:L22523, GB:L22524, SP:P09237, PID:348021, PID:35799, and PID:35803; identified by sequence similarity' YP_017547.2 'similar to GP:16409495, GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_017548.1 'similar to GP:16409496, GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_017551.1 'similar to GP:15026741, GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_017552.1 'similar to SP:P31861, and SP:P31861; identified by sequence similarity' YP_017556.1 'similar to GB:M37981, GB:X53559, GB:Y08418, SP:P32297, PID:1702908, PID:189253, PID:34986, GB:M37981, GB:X53559, GB:Y08418, SP:P32297, PID:1702908, PID:189253, and PID:34986; identified by sequence similarity' YP_017557.1 similar to SP:P17448; identified by sequence similarity YP_017558.1 'similar to GP:2443240, SP:P18183, GB:X52983, and PID:48745; identified by sequence similarity' YP_017559.1 'similar to GP:2443239, SP:P18183, GB:X52983, and PID:48745; identified by sequence similarity' YP_017560.2 'similar to SP:P37820, and PID:396204; identified by sequence similarity' YP_017561.1 'similar to GB:X51804, SP:P17152, and PID:35535; identified by sequence similarity' YP_017562.1 'similar to GP:4584112, and GP:4584112; identified by sequence similarity' YP_017563.1 similar to GP:6015489; identified by sequence similarity YP_017565.1 identified by match to PFAM protein family HMM PF03791 YP_017566.1 'similar to GP:15025866, and GP:15025866; identified by sequence similarity' YP_017567.1 identified by match to PFAM protein family HMM PF04271 YP_017568.2 unwinds double stranded DNA YP_017569.1 identified by match to TIGR protein family HMM TIGR01784 YP_017571.1 identified by match to PFAM protein family HMM PF03032 YP_017572.1 'similar to GP:15023412, and GP:15023412; identified by sequence similarity' YP_017573.1 'similar to SP:Q08434, GB:S61781, PID:975350, PID:1934778, and PID:2231217; identified by sequence similarity' YP_017574.1 identified by match to PFAM protein family HMM PF03788; similar to GP:4894232; identified by sequence similarity YP_017575.1 identified by match to PFAM protein family HMM PF02796 YP_017576.1 'similar to SP:P32694, PID:396383, GB:U00096, PID:1790482, SP:P32694, PID:396383, GB:U00096, and PID:1790482; identified by sequence similarity' YP_017577.2 identified by match to PFAM protein family HMM PF04284 YP_017579.1 'similar to GP:17133113, and GP:17133113; identified by sequence similarity' YP_017580.2 identified by match to TIGR protein family HMM TIGR01732 YP_017581.1 'similar to GB:L25667, SP:P40297, and PID:475123; identified by sequence similarity' YP_017582.1 identified by match to PFAM protein family HMM PF03403 YP_017584.1 'similar to GP:17430774, and GP:17430774; identified by sequence similarity' YP_017585.1 identified by match to PFAM protein family HMM PF04172 YP_017586.1 identified by match to TIGR protein family HMM TIGR01746 YP_017587.1 'similar to GP:17133703, and GP:17133703; identified by sequence similarity' YP_017590.1 similar to GP:10176440; identified by sequence similarity YP_017591.1 identified by match to TIGR protein family HMM TIGR00560 YP_017592.1 'similar to GB:M64082, SP:Q01740, and PID:182671; identified by sequence similarity' YP_017593.1 identified by match to PFAM protein family HMM PF04238 YP_017594.1 'similar to GP:7110140, and GP:7110140; identified by sequence similarity' YP_017595.1 similar to DhaK; in Lactococcus lactis this protein froms a stable complex with DhaS and activates transcription of the dha operon in the presence of dihydroxyacetone YP_017596.1 identified by match to PFAM protein family HMM PF00440 YP_017597.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_017598.1 similar to GP:10176668; identified by sequence similarity YP_017599.1 'similar to GP:15026619, and GP:15026619; identified by sequence similarity' YP_017603.1 'similar to SP:P12983, and PID:48332; identified by sequence similarity' YP_017606.2 similar to GP:15026497; identified by sequence similarity; identified by match to TIGR protein family HMM TIGR01732 YP_017610.1 similar to GP:4894306; identified by sequence similarity YP_017611.1 'similar to GP:16413635, and GP:16413635; identified by sequence similarity' YP_017612.1 similar to GP:16410630; identified by sequence similarity YP_017614.1 'similar to SP:P18183, GB:X52983, PID:48745, SP:P18183, GB:X52983, and PID:48745; identified by sequence similarity' YP_017615.1 'similar to SP:P27309, PID:1217911, PID:217030, SP:P27309, PID:1217911, and PID:217030; identified by sequence similarity' YP_017616.1 identified by match to PFAM protein family HMM PF04226 YP_017618.1 'similar to GP:8670943, and SP:P17903; identified by sequence similarity' YP_017619.1 binds to sigma-B preventing the formation of an RNA polymerase holoenzyme YP_017620.1 'sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase' YP_017621.1 'similar to GP:8670946, and SP:Q9S2N0; identified by sequence similarity' YP_017622.1 'similar to GP:17131371, and GP:17131371; identified by sequence similarity' YP_017623.1 'similar to GP:17130938, GB:S76965, and SP:P04541; identified by sequence similarity' YP_017624.1 'similar to GP:17130973, and GP:17130973; identified by sequence similarity' YP_017627.1 'similar to GP:17130148, and GP:3089535; identified by sequence similarity' YP_017629.1 'similar to SP:Q9RMY7, and SP:Q9RMY7; identified by sequence similarity' YP_017632.1 identified by match to TIGR protein family HMM TIGR01751 YP_017633.2 'similar to SP:P37820, PID:396204, SP:P37820, and PID:396204; identified by sequence similarity' YP_017636.2 'similar to SP:P80102, and SP:P80102; identified by sequence similarity' YP_017637.1 'similar to GP:16411691, and GP:16411691; identified by sequence similarity' YP_017638.1 'similar to GB:D10048, SP:P26876, GB:X63390, PID:216896, PID:45341, and PID:1752730; identified by sequence similarity' YP_017640.1 catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates YP_017641.1 'similar to GP:16502382, and GP:16502382; identified by sequence similarity' YP_017642.1 'similar to SP:P05021, GB:X02826, PID:42609, GB:U00096, PID:1651460, and PID:1787177; identified by sequence similarity' YP_052613.1 similar to SP:P10245; identified by sequence similarity YP_017645.1 similar to GP:16413204; identified by sequence similarity YP_017646.1 'similar to GP:1805447, SP:P07105, GB:X05797, and PID:41406; identified by sequence similarity' YP_017648.1 identified by match to TIGR protein family HMM TIGR01738 YP_017649.1 'similar to SP:P80100, and SP:P80100; identified by sequence similarity' YP_017650.2 similar to GP:15026541; identified by sequence similarity YP_052614.1 similar to GP:13774167; identified by sequence similarity YP_017652.1 'similar to GB:L06498, SP:P17075, and PID:292443; identified by sequence similarity' YP_017653.1 similar to GP:14587909; identified by sequence similarity YP_017654.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP YP_017655.1 'similar to GB:K03208, GB:K02577, GB:K02578, SP:P02811, SP:P02812, SP:P04280, SP:P04281, SP:P10162, and PID:190510; identified by sequence similarity' YP_017657.1 similar to GP:3298510; identified by sequence similarity YP_017659.2 part of sigC operon induced by temperature upshift YP_017660.1 part of sigC operon that is induced by temperature upshift YP_017661.2 similar to GP:16412870; identified by sequence similarity YP_017662.1 identified by match to PFAM protein family HMM PF04218 YP_017663.1 'similar to SP:P10245, and SP:P10245; identified by sequence similarity' YP_017664.2 identified by match to PFAM protein family HMM PF03137 YP_017665.1 'similar to SP:P32694, PID:396383, GB:U00096, PID:1790482, SP:P32694, PID:396383, GB:U00096, and PID:1790482; identified by sequence similarity' YP_017667.1 'similar to SP:P09123, PID:452398, SP:P09123, and PID:452398; identified by sequence similarity' YP_017668.1 cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein YP_017669.1 similar to SP:P80100; identified by sequence similarity YP_017670.1 hpr; ScoC; MarR family; protease production regulatory protein YP_017671.1 identified by match to PFAM protein family HMM PF02987 YP_017672.1 'similar to SP:P80046, and PID:1478267; identified by sequence similarity' YP_017673.1 similar to GP:16414830; identified by sequence similarity YP_017674.1 similar to GP:16411684; identified by sequence similarity YP_017675.1 similar to GP:10173809; identified by sequence similarity; identified by match to TIGR protein family HMM TIGR01732 YP_017677.1 similar to GP:6002942; identified by sequence similarity YP_017679.1 'similar to SP:P19433, GB:X55500, PID:288287, SP:P19433, GB:X55500, and PID:288287; identified by sequence similarity' YP_017685.1 similar to GP:16409894; identified by sequence similarity YP_017686.1 identified by match to PFAM protein family HMM PF03696 YP_017688.1 identified by match to PFAM protein family HMM PF00376 YP_017690.1 'similar to SP:P19433, GB:X55500, PID:288287, SP:P19433, GB:X55500, and PID:288287; identified by sequence similarity' YP_052615.1 'similar to SP:P19433, GB:X55500, and PID:288287; identified by sequence similarity' YP_017694.1 'similar to GB:X58377, GB:M57765, SP:P20809, PID:186273, PID:22953, GB:X58377, GB:M57765, SP:P20809, PID:186273, and PID:22953; identified by sequence similarity' YP_017695.2 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_017696.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_017697.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX YP_017700.3 'similar to GB:X66604, and PID:45867; identified by sequence similarity' YP_017703.1 'similar to GP:143297, GB:Z15114, SP:P05129, and PID:35497; identified by sequence similarity' YP_017704.1 similar to GP:15026527; identified by sequence similarity YP_017705.1 'similar to GB:X66503, and SP:P30520; identified by sequence similarity' YP_017706.1 'similar to SP:P32399, GB:M27819, GB:X12609, GB:S68680, GB:X77737, GB:X77738, SP:P02730, PID:178216, PID:178220, PID:28714, and PID:553169; identified by sequence similarity' YP_017707.1 'similar to GB:Z29090, SP:P42336, GB:U79143, PID:1763626, and PID:472991; identified by sequence similarity' YP_017708.2 'similar to GB:U03161, SP:P42512, and PID:454353; identified by sequence similarity' YP_017709.1 'similar to SP:P16567, GB:L25436, GB:L39020, and PID:457204; identified by sequence similarity' YP_017710.1 similar to GP:10173866; identified by sequence similarity YP_022559.1 similar to GP:2226241; identified by sequence similarity YP_017711.1 'similar to SP:P26997, PID:217186, SP:P26997, and PID:217186; identified by sequence similarity' YP_017712.1 identified by match to PFAM protein family HMM PF03099 YP_017714.2 activates fatty acids by binding to coenzyme A YP_017716.1 similar to SP:Q9RMZ0; identified by sequence similarity YP_017717.1 'similar to GP:16412895, GB:D00726, SP:P22830, and PID:219656; identified by sequence similarity' YP_017721.1 'similar to GB:D00726, SP:P22830, PID:219656, GB:D00726, SP:P22830, and PID:219656; identified by sequence similarity' YP_017722.1 similar to GP:7670478; identified by sequence similarity YP_017723.1 similar to GP:16412895; identified by sequence similarity YP_017732.1 'similar to SP:P21111, and GB:U09990; identified by sequence similarity' YP_017733.1 'similar to SP:P80259, and SP:P80259; identified by sequence similarity' YP_017734.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_017735.2 similar to GP:10176130; identified by sequence similarity YP_022560.1 similar to GP:12543212; identified by sequence similarity YP_017738.1 'similar to GP:2832807, SP:P04990, GB:M23217, PID:40211, PID:558495, and GB:AL009126; identified by sequence similarity' YP_017739.1 'similar to SP:P04990, GB:M23217, PID:40211, PID:558495, and GB:AL009126; identified by sequence similarity' YP_017740.1 identified by match to PFAM protein family HMM PF02517 YP_017744.2 identified by match to PFAM protein family HMM PF01435 YP_017745.1 'similar to GB:D10250, PID:219430, and PID:976347; identified by sequence similarity' YP_017746.2 similar to SP:Q07835; identified by sequence similarity YP_017747.1 similar to GP:4894306; identified by sequence similarity YP_017748.1 'similar to GP:4894306, GB:D21260, GB:X55878, GB:D45298, SP:Q00610, PID:29983, and PID:434761; identified by sequence similarity' YP_017749.1 'similar to GP:4894306, GB:S64176, GB:Y00525, and PID:402807; identified by sequence similarity' YP_017750.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle YP_017751.1 'Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates' YP_017752.1 'similar to GB:X67698, and PID:37477; identified by sequence similarity' YP_017753.1 'similar to SP:P35088, PID:454074, SP:P35088, and PID:454074; identified by sequence similarity' YP_017756.1 similar to GP:2226262; identified by sequence similarity YP_017757.1 'similar to SP:P37749, GB:U03041, GB:U09876, PID:508244, PID:510255, GB:U00096, PID:1788346, SP:P37749, GB:U03041, GB:U09876, PID:508244, PID:510255, GB:U00096, and PID:1788346; identified by sequence similarity' YP_017758.1 'similar to SP:P71013, GB:L22647, SP:P34995, and PID:410209; identified by sequence similarity' YP_017759.1 'similar to SP:P23477, GB:X16560, SP:P15954, and PID:30155; identified by sequence similarity' YP_017760.1 similar to SP:P23478; identified by sequence similarity YP_017761.1 identified by match to PFAM protein family HMM PF03118 YP_017762.1 similar to GP:2984723; identified by sequence similarity YP_017763.1 similar to GP:2984722; identified by sequence similarity YP_017764.1 similar to GP:2984721; identified by sequence similarity YP_017765.1 similar to GP:2984720; identified by sequence similarity YP_017766.1 similar to GP:2984719; identified by sequence similarity YP_017767.1 similar to GP:2984718; identified by sequence similarity YP_017768.2 'similar to SP:P32677, GB:U00006, PID:396301, GB:U00096, and PID:1790391; identified by sequence similarity' YP_017770.1 'similar to SP:P38021, GB:M81758, SP:P35499, PID:292487, PID:338213, and PID:908809; identified by sequence similarity' YP_017771.1 'similar to SP:P32677, GB:U00006, PID:396301, GB:U00096, PID:1790391, SP:P32677, GB:U00006, PID:396301, GB:U00096, and PID:1790391; identified by sequence similarity' YP_017772.1 'similar to SP:P32677, GB:U00006, PID:396301, GB:U00096, PID:1790391, SP:P32677, GB:U00006, PID:396301, GB:U00096, and PID:1790391; identified by sequence similarity' YP_017773.2 'similar to SP:O05272, and SP:O05272; identified by sequence similarity' YP_017774.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_017775.1 similar to GP:16412285; identified by sequence similarity YP_017778.1 'similar to GB:M18461, GB:S60788, PID:1552514, PID:339016, PID:575274, and PID:930052; identified by sequence similarity' YP_017779.1 identified by match to PFAM protein family HMM PF01381 YP_017780.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_017781.1 'similar to SP:P08063, PID:154718, PID:154801, SP:P08063, PID:154718, and PID:154801; identified by sequence similarity' YP_017783.1 cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein YP_017785.1 identified by match to PFAM protein family HMM PF02588 YP_017786.1 similar to GP:22776874; identified by sequence similarity YP_017787.1 similar to GP:22776875; identified by sequence similarity YP_017788.1 identified by match to TIGR protein family HMM TIGR01681 YP_017789.2 'similar to SP:P33014, GB:U00009, PID:405955, GB:U00096, PID:1788322, SP:P33014, GB:U00009, PID:405955, GB:U00096, and PID:1788322; identified by sequence similarity' YP_017790.1 'similar to GP:16411676, and SP:Q9RA63; identified by sequence similarity' YP_017791.1 similar to GP:2564027; identified by sequence similarity YP_017793.1 'similar to SP:P33014, GB:U00009, PID:405955, GB:U00096, PID:1788322, SP:P33014, GB:U00009, PID:405955, GB:U00096, and PID:1788322; identified by sequence similarity' YP_017794.1 similar to GP:10175513; identified by sequence similarity YP_017795.2 'similar to SP:P10250, and PID:44228; identified by sequence similarity' YP_017796.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_017798.1 'FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP' YP_017799.1 'similar to SP:P10250, PID:44228, SP:P10250, and PID:44228; identified by sequence similarity' YP_017800.1 'similar to SP:P10250, PID:44228, SP:P10250, and PID:44228; identified by sequence similarity' YP_017801.1 'catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA' YP_052616.1 'similar to GP:10717143, and GP:10717143; identified by sequence similarity' YP_017805.1 'similar to GP:10717144, GB:K02765, SP:P01024, PID:179665, and PID:181130; identified by sequence similarity' YP_017806.1 'similar to GP:10717145, GB:M77349, SP:Q15582, and PID:339568; identified by sequence similarity' YP_017807.1 'similar to GP:10717146, GB:U01062, PID:393036, and PID:483831; identified by sequence similarity' YP_017808.1 'similar to GP:10717147, and SP:P24137; identified by sequence similarity' YP_017809.1 'similar to SP:P06008, GB:X02659, and PID:46478; identified by sequence similarity' YP_017810.1 'similar to GP:10717143, and GP:10717143; identified by sequence similarity' YP_017813.1 the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress YP_017814.1 identified by match to PFAM protein family HMM PF03772 YP_017815.1 'enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence' YP_017816.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) YP_017818.1 identified by match to PFAM protein family HMM PF01432 YP_022565.1 'similar to SP:P24618, PID:149879, SP:P31631, GB:M62363, and PID:150518; identified by sequence similarity' YP_017820.1 'similar to SP:P33446, GB:X64876, and PID:313842; identified by sequence similarity' YP_017821.1 'similar to SP:P09163, GB:X02800, PID:396347, PID:42884, GB:U00096, PID:1790442, SP:P09163, GB:X02800, PID:396347, PID:42884, GB:U00096, and PID:1790442; identified by sequence similarity' YP_017822.1 'similar to SP:P09163, GB:X02800, PID:396347, PID:42884, GB:U00096, PID:1790442, SP:P09163, GB:X02800, PID:396347, PID:42884, GB:U00096, and PID:1790442; identified by sequence similarity' YP_017823.1 'similar to GP:16410369, and GP:16410369; identified by sequence similarity' YP_017824.1 catalyzes the phosphorylation of NAD to NADP YP_017828.1 'asymmetrical; catalyzes the formation of NTP and NMP from P(1),P(4)-bis(5'-nucleosyl) tetraphosphate; acts on bis(5'-guanosyl) tetraphosphate, bis(5'-xanthosyl)-tetraphosphate, on bis(5'-adenosyl)-tetraphosphate, and bis(5'-uridyl)-tetraphosphate' YP_017832.1 similar to GP:15025356; identified by sequence similarity YP_017835.1 similar to GP:13162641; identified by sequence similarity YP_017836.1 identified by match to PFAM protein family HMM PF01391 YP_017838.1 similar to GP:15026386; identified by sequence similarity YP_017842.1 'similar to GB:J03210, SP:P08253, PID:180616, and PID:180671; identified by sequence similarity' YP_017843.1 'similar to GB:L07515, GB:U26311, SP:P45973, and PID:886063; identified by sequence similarity' YP_017844.1 identified by match to TIGR protein family HMM TIGR01746 YP_017845.1 identified by match to TIGR protein family HMM TIGR01746 YP_017846.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_017847.2 'similar to SP:P18780, and PID:1088257; identified by sequence similarity' YP_017848.1 'similar to GB:Z22971, GB:Z22969, GB:Z22968, and PID:312148; identified by sequence similarity' YP_017849.2 'similar to SP:P18780, PID:1088257, SP:P18780, and PID:1088257; identified by sequence similarity' YP_017852.1 'similar to GB:Z22971, GB:Z22969, GB:Z22968, and PID:312148; identified by sequence similarity' YP_017853.3 'similar to SP:P56255, SP:P28079, GB:X63903, and PID:48099; identified by sequence similarity' YP_017854.1 identified by match to PFAM protein family HMM PF00583 YP_017855.1 similar to 2'-5' RNA ligase YP_017856.1 'similar to SP:P28079, GB:X63903, PID:48099, SP:P28079, GB:X63903, and PID:48099; identified by sequence similarity' YP_017857.1 identified by match to PFAM protein family HMM PF04142 YP_017858.1 similar to GP:10173337; identified by sequence similarity YP_017859.1 'similar to GB:D14689, SP:P35658, PID:285957, GB:D14689, SP:P35658, and PID:285957; identified by sequence similarity' YP_017861.1 similar to SP:O06493; identified by sequence similarity YP_017863.1 'with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine' YP_017864.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity YP_017865.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_017866.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_017867.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis YP_017868.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_017869.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_017871.1 'similar to GP:16504922, GB:M74493, GB:M33384, GB:M74491, SP:P16587, SP:P32889, PID:178160, PID:178162, and PID:178981; identified by sequence similarity' YP_017872.1 'similar to GP:17132172, and GP:17428563; identified by sequence similarity' YP_017873.1 'similar to GP:15025457, and GP:15025457; identified by sequence similarity' YP_017874.1 identified by match to PFAM protein family HMM PF03772 YP_017879.2 identified by match to PFAM protein family HMM PF02737 YP_017880.1 identified by match to PFAM protein family HMM PF00583 YP_017882.1 'similar to GP:17134021, and GP:17134021; identified by sequence similarity' YP_017883.1 'similar to GP:4218544, SP:P24039, GB:X56813, and PID:45843; identified by sequence similarity' YP_017885.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA YP_017886.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_017887.1 identified by match to PFAM protein family HMM PF01381 YP_017888.1 similar to GP:22776803; identified by sequence similarity YP_017891.1 similar to GP:10175368; identified by sequence similarity YP_017892.1 similar to GP:4894314; identified by sequence similarity YP_017893.1 'similar to GP:4894314, and GP:15022861; identified by sequence similarity' YP_017900.1 similar to GP:15023901; identified by sequence similarity YP_017902.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_017903.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_022567.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_017907.1 'similar to GP:9858108, and SP:P06533; identified by sequence similarity' YP_022568.1 'similar to GP:9858109, and SP:P23308; identified by sequence similarity' YP_017909.1 'similar to GP:9858110, and GP:9858110; identified by sequence similarity' YP_017910.1 similar to SP:P39616; identified by sequence similarity YP_017911.1 identified by match to TIGR protein family HMM TIGR01193 YP_017913.1 'similar to GP:3341855, and SP:P23860; identified by sequence similarity' YP_017914.1 identified by match to PFAM protein family HMM PF03208 YP_017915.1 similar to GP:15023729; identified by sequence similarity YP_017916.1 identified by match to PFAM protein family HMM PF01569 YP_017917.1 'similar to GB:M72148, SP:P27802, and PID:150061; identified by sequence similarity' YP_017918.1 'similar to SP:P37623, PID:466611, GB:U00096, PID:1789886, SP:P37623, PID:466611, GB:U00096, and PID:1789886; identified by sequence similarity' YP_017921.1 'similar to GP:2632218, and GP:2632218; identified by sequence similarity' YP_017922.1 'similar to SP:P52074, SP:P07883, and PID:581613; identified by sequence similarity' YP_017923.1 identified by match to PFAM protein family HMM PF02913 YP_017924.1 identified by match to PFAM protein family HMM PF02954 YP_017925.1 similar to GP:10174561; identified by sequence similarity YP_017926.1 identified by match to TIGR protein family HMM TIGR01387 YP_017927.1 similar to GP:10174563; identified by sequence similarity YP_017928.1 'similar to GP:1945709, and GP:1945709; identified by sequence similarity' YP_017929.1 'similar to SP:P00212, and SP:P00212; identified by sequence similarity' YP_017930.1 identified by match to TIGR protein family HMM TIGR00273 YP_017931.1 'similar to SP:P06626, GB:U01159, GB:K01147, PID:148642, PID:398512, SP:P06626, GB:U01159, GB:K01147, PID:148642, and PID:398512; identified by sequence similarity' YP_017932.1 'similar to GB:J04038, GB:J02642, GB:M17851, GB:M33197, GB:X01677, GB:X53778, GB:M36164, GB:M28283, SP:P00354, SP:P04406, PID:182861, PID:182863, PID:182977, PID:182981, and PID:31645; identified by sequence similarity' YP_017935.1 'similar to GB:X12966, GB:X14813, GB:X65140, SP:P09110, PID:1340140, PID:23874, PID:23876, and PID:825617; identified by sequence similarity' YP_017936.1 'similar to GP:4160468, and GP:4160468; identified by sequence similarity' YP_017938.1 similar to GP:3395637; identified by sequence similarity YP_017939.1 'similar to GB:M31516, GB:M30142, SP:P08174, and PID:181476; identified by sequence similarity' YP_017940.1 identified by match to PFAM protein family HMM PF03061 YP_017941.1 'similar to GP:4160471, and GP:4160471; identified by sequence similarity' YP_017943.1 'similar to GP:4160472, and GP:4160472; identified by sequence similarity' YP_017944.1 'similar to GP:13812267, and GP:13812267; identified by sequence similarity' YP_017945.1 catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis YP_017946.1 'similar to GP:4160475, and GP:4160475; identified by sequence similarity' YP_017947.1 similar to GP:17742592; identified by sequence similarity YP_017949.1 similar to SP:P26829; identified by sequence similarity YP_017951.1 similar to GP:10173477; identified by sequence similarity YP_017952.2 identified by match to TIGR protein family HMM TIGR00971 YP_017958.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate YP_052619.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate YP_017961.1 similar to GP:13429872; identified by sequence similarity YP_017962.1 identified by match to PFAM protein family HMM PF00455 YP_017963.1 'similar to SP:P26767, GB:X56697, and PID:1334253; identified by sequence similarity' YP_017969.1 similar to GP:16409929; identified by sequence similarity YP_017972.1 'similar to SP:P33995, GB:Z27094, PID:414888, PID:551341, PID:606144, GB:U00096, and PID:1789598; identified by sequence similarity' YP_017973.1 'similar to SP:P33995, GB:Z27094, PID:414888, PID:551341, PID:606144, GB:U00096, and PID:1789598; identified by sequence similarity' YP_017974.1 'similar to GB:J01619, SP:P10446, GB:X00980, PID:146197, PID:42923, PID:495784, GB:U00096, PID:1651317, and PID:1786940; identified by sequence similarity' YP_017975.1 'similar to SP:P14707, GB:X15942, PID:46875, SP:P14707, GB:X15942, and PID:46875; identified by sequence similarity' YP_017977.1 similar to SP:Q08430; identified by sequence similarity YP_017978.1 identified by match to PFAM protein family HMM PF02568 YP_017979.1 'similar to GB:M60178, SP:P22865, PID:149525, and PID:512521; identified by sequence similarity' YP_017980.1 identified by match to PFAM protein family HMM PF04055 YP_017981.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_017985.1 identified by match to PFAM protein family HMM PF00583 YP_017989.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF YP_052620.1 Catalyzes the rate-limiting step in dNTP synthesis YP_017994.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE YP_017995.1 'similar to GP:15023102, and GP:15023102; identified by sequence similarity' YP_017996.1 'similar to GP:15023103, and GP:15023103; identified by sequence similarity' YP_017998.2 'similar to GB:L11931, GB:L23928, SP:P34896, and PID:438634; identified by sequence similarity' YP_017999.2 'similar to GB:M14753, GB:X16416, GB:U07561, GB:U07563, GB:M14752, GB:M14754, GB:M30833, GB:S69223, SP:P00519, PID:179746, PID:179750, PID:514267, PID:514268, PID:553164, PID:560759, GB:M14753, GB:X16416, GB:U07561, GB:U07563, GB:M14752, GB:M14754, GB:M30833, GB:S69223, SP:P00519, PID:179746, PID:179750, PID:514267, PID:514268, PID:553164, and PID:560759; identified by sequence similarity' YP_018000.1 identified by match to PFAM protein family HMM PF04014 YP_018002.2 similar to GP:1881235; identified by sequence similarity YP_018004.1 'similar to SP:P06626, GB:U01159, GB:K01147, PID:148642, and PID:398512; identified by sequence similarity' YP_018005.1 'similar to GP:16503749, and SP:P31143; identified by sequence similarity' YP_018006.1 'similar to GP:15023135, and GP:15023135; identified by sequence similarity' YP_018007.1 'similar to GP:10173821, and GP:10173821; identified by sequence similarity' YP_018008.1 'similar to GB:D00726, SP:P22830, and PID:219656; identified by sequence similarity' YP_018009.1 D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid YP_018010.1 'similar to GB:X15144, SP:P26998, PID:1340162, GB:X15144, SP:P26998, and PID:1340162; identified by sequence similarity' YP_018011.1 transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid YP_018013.1 'similar to SP:P37112, GB:M16442, and PID:143790; identified by sequence similarity' YP_018015.1 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group' YP_018018.1 'similar to SP:P31969, GB:M99379, and PID:154583; identified by sequence similarity' YP_018019.1 'similar to GB:M21119, GB:M19045, GB:X14008, SP:P00695, PID:1330300, PID:1335210, PID:307140, PID:307141, PID:307142, and PID:847820; identified by sequence similarity' YP_018023.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones YP_018024.2 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell YP_018028.1 'similar to SP:P54182, GB:X59871, GB:X59869, GB:X59870, SP:P36402, PID:36788, PID:619882, and PID:619884; identified by sequence similarity' YP_018030.1 identified by match to PFAM protein family HMM PF00860 YP_018031.1 similar to GP:3395637; identified by sequence similarity YP_018033.2 'similar to SP:P02372, PID:43143, GB:U00096, PID:1788961, SP:P02372, PID:43143, GB:U00096, and PID:1788961; identified by sequence similarity' YP_018035.1 identified by match to PFAM protein family HMM PF03698 YP_018037.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_018038.2 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit YP_018039.1 'with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit' YP_018040.1 'catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis' YP_018041.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_018042.2 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_018043.1 'dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate' YP_018044.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_018045.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_018046.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_018047.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_018048.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_018049.1 'with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide' YP_018050.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_018052.1 'catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase' YP_018055.1 catalyzes the formation of L-histidinol from L-histidinol phosphate YP_018058.1 'Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor' YP_018059.1 similar to SP:P35879; identified by sequence similarity YP_018060.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_018062.1 similar to GP:410117; identified by sequence similarity YP_018064.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite YP_018065.1 ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms YP_018066.1 identified by match to PFAM protein family HMM PF03205 YP_018067.1 'similar to GP:6007442, and GP:1113082; identified by sequence similarity' YP_018069.1 'catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1' YP_018070.1 'similar to GP:2462961, SP:P11744, GB:M95287, GB:M80188, GB:L06418, GB:U04278, GB:X12870, GB:X15024, GB:X58425, PID:149120, PID:150401, PID:151823, PID:42647, PID:43094, PID:48209, PID:523334, PID:530820, PID:551866, and PID:1197824; identified by sequence similarity' YP_018071.1 catalyzes the formation of siroheme from precorrin-2 YP_018072.1 identified by match to PFAM protein family HMM PF03132 YP_018073.1 identified by match to TIGR protein family HMM TIGR01000 YP_018074.1 'similar to GB:M96803, GB:S65762, GB:D17086, SP:Q01082, and PID:338443; identified by sequence similarity' YP_018075.1 identified by match to PFAM protein family HMM PF04167 YP_018076.2 identified by match to PFAM protein family HMM PF03606 YP_018078.1 'similar to SP:O32201, SP:P07020, PID:43144, GB:U00096, PID:1788959, and PID:1800012; identified by sequence similarity' YP_018079.1 'similar to GP:16410422, SP:P07020, PID:43144, GB:U00096, PID:1788959, and PID:1800012; identified by sequence similarity' YP_018080.1 'similar to GP:16410423, and GP:16413479; identified by sequence similarity' YP_018081.1 'similar to GP:16410424, and GP:16410424; identified by sequence similarity' YP_018083.1 'similar to SP:P13954, GB:Y07536, PID:46552, and PID:46749; identified by sequence similarity' YP_022570.1 similar to GP:12832776; identified by sequence similarity YP_018084.1 identified by match to PFAM protein family HMM PF03602 YP_018087.1 'similar to GP:17429545, and GP:17429545; identified by sequence similarity' YP_018088.1 identified by match to PFAM protein family HMM PF04033 YP_018089.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine YP_018090.2 'similar to GP:5139625, GB:L07807, GB:L07810, GB:L07808, GB:L07809, SP:Q05193, PID:181849, and PID:181851; identified by sequence similarity' YP_018092.1 'similar to SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, and PID:1789987; identified by sequence similarity' YP_018093.1 similar to GP:16411719; identified by sequence similarity YP_018094.1 similar to GP:16411718; identified by sequence similarity YP_018095.1 'similar to GP:16411699, GB:X58377, GB:M57765, SP:P20809, PID:186273, and PID:22953; identified by sequence similarity' YP_018101.1 'similar to SP:P05325, PID:150048, SP:P05325, and PID:150048; identified by sequence similarity' YP_018103.1 identified by match to PFAM protein family HMM PF00589 YP_018104.1 'similar to GP:15025450, and GP:15025450; identified by sequence similarity' YP_018106.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate YP_018107.1 identified by match to TIGR protein family HMM TIGR01766 YP_018108.1 similar to GP:17134725; identified by sequence similarity YP_018109.1 'similar to GP:2804528, and GP:14276147; identified by sequence similarity' YP_018111.1 'similar to GB:X67055, GB:X14690, PID:1628399, PID:288563, PID:35465, GB:X67055, GB:X14690, PID:1628399, PID:288563, and PID:35465; identified by sequence similarity' YP_018112.1 identified by match to PFAM protein family HMM PF02777 YP_018113.2 similar to GP:10174190; identified by sequence similarity YP_018114.1 similar to GP:10174191; identified by sequence similarity YP_018115.1 'similar to GB:X03350, GB:X03350, GB:X03350, GB:D00137, GB:M21692, GB:M24317, GB:M24308, GB:M24309, GB:M24310, GB:M24311, GB:M24312, GB:M24313, GB:M24314, GB:M24315, GB:M24316, GB:M37067, GB:X15447, GB:X15448, GB:X15449, GB:X15450, GB:X15451, GB:X15452, GB:X15453, GB:X15454, GB:X15455, SP:P00325, SP:P00326, SP:P07327, PID:1223739, PID:178098, PID:178100, PID:178111, PID:219428, PID:28416, PID:598143, PID:825622, GB:X03350, GB:X03350, GB:X03350, GB:D00137, GB:M21692, GB:M24317, GB:M24308, GB:M24309, GB:M24310, GB:M24311, GB:M24312, GB:M24313, GB:M24314, GB:M24315, GB:M24316, GB:M37067, GB:X15447, GB:X15448, GB:X15449, GB:X15450, GB:X15451, GB:X15452, GB:X15453, GB:X15454, GB:X15455, SP:P00325, SP:P00326, SP:P07327, PID:1223739, PID:178098, PID:178100, PID:178111, PID:219428, PID:28416, PID:598143, PID:825622, GB:X03350, GB:X03350, GB:X03350, GB:D00137, GB:M21692, GB:M24317, GB:M24308, GB:M24309, GB:M24310, GB:M24311, GB:M24312, GB:M24313, GB:M24314, GB:M24315, GB:M24316, GB:M37067, GB:X15447, GB:X15448, GB:X15' YP_018117.1 catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome c YP_018118.1 'similar to SP:P35161, GB:D14658, PID:285941, GB:D14658, and PID:285941; identified by sequence similarity' YP_018119.1 'similar to GB:X53281, GB:X53280, SP:P20290, PID:29505, PID:29507, and PID:395087; identified by sequence similarity' YP_018120.1 'similar to GB:S59346, SP:P37198, and PID:432654; identified by sequence similarity' YP_018121.2 'similar to GB:X69151, GB:J05682, SP:P21283, PID:340188, and PID:37643; identified by sequence similarity' YP_018122.1 identified by match to TIGR protein family HMM TIGR00636 YP_018123.1 similar to SP:P33648; identified by sequence similarity YP_018125.1 similar to SP:P50726; identified by sequence similarity YP_018126.1 similar to SP:P50727; identified by sequence similarity YP_018127.1 similar to SP:P50728; identified by sequence similarity YP_018128.2 similar to SP:P50729; identified by sequence similarity YP_018129.1 identified by match to PFAM protein family HMM PF02517 YP_018130.1 'similar to GB:Z25821, GB:Z25822, GB:Z25823, GB:Z25824, SP:P42126, PID:472987, PID:511635, PID:825689, GB:Z25821, GB:Z25822, GB:Z25823, GB:Z25824, SP:P42126, PID:472987, PID:511635, and PID:825689; identified by sequence similarity' YP_022572.1 identified by match to PFAM protein family HMM PF00376 YP_018134.1 'enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence' YP_018135.1 'similar to SP:O74024, GB:Z29491, GB:S73196, GB:S73197, GB:D31846, SP:P41181, PID:474059, and PID:567250; identified by sequence similarity' YP_018138.2 'similar to SP:P09150, GB:M10743, PID:147467, PID:147470, PID:537088, GB:U00096, and PID:1790694; identified by sequence similarity' YP_018139.1 'similar to GB:Z29491, GB:S73196, GB:S73197, GB:D31846, SP:P41181, PID:474059, and PID:567250; identified by sequence similarity' YP_018140.2 similar to SP:P50286; identified by sequence similarity YP_018141.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP YP_018142.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_018143.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_018146.1 'similar to GB:Z29491, GB:S73196, GB:S73197, GB:D31846, SP:P41181, PID:474059, PID:567250, GB:Z29491, GB:S73196, GB:S73197, GB:D31846, SP:P41181, PID:474059, and PID:567250; identified by sequence similarity' YP_018148.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_018149.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_018151.1 'similar to GB:Z29491, GB:S73196, GB:S73197, GB:D31846, SP:P41181, PID:474059, PID:567250, GB:Z29491, GB:S73196, GB:S73197, GB:D31846, SP:P41181, PID:474059, and PID:567250; identified by sequence similarity' YP_018152.1 'similar to GB:X62692, GB:X62693, GB:X62694, GB:X62695, GB:S41458, GB:X66142, GB:X90587, SP:P35913, PID:1335014, PID:1335015, PID:1335250, PID:396493, PID:825641, GB:X62692, GB:X62693, GB:X62694, GB:X62695, GB:S41458, GB:X66142, GB:X90587, SP:P35913, PID:1335014, PID:1335015, PID:1335250, PID:396493, and PID:825641; identified by sequence similarity' YP_018153.2 'similar to GB:X15653, SP:P13051, PID:1296803, and PID:37599; identified by sequence similarity' YP_018154.1 'similar to GB:L05425, and PID:179285; identified by sequence similarity' YP_018155.1 'involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer' YP_018156.1 'similar to SP:P31112, GB:Y00805, GB:M36712, GB:X13452, SP:P10966, SP:P14860, SP:P14861, PID:178673, PID:180166, PID:29823, PID:29827, PID:29831, and PID:34441; identified by sequence similarity' YP_018157.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone YP_018158.1 'similar to SP:P31114, GB:J03483, GB:J03915, GB:U03742, GB:U03743, GB:U03744, GB:U03748, GB:U03745, GB:U03746, GB:U03747, GB:U03749, and SP:P10645; identified by sequence similarity' YP_018159.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_018160.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_018161.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_018162.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_018163.1 'similar to GB:M55531, GB:U05344, GB:U11839, GB:U11840, GB:U11841, GB:U11842, GB:U11843, SP:P22732, PID:516515, GB:M55531, GB:U05344, GB:U11839, GB:U11840, GB:U11841, GB:U11842, GB:U11843, SP:P22732, and PID:516515; identified by sequence similarity' YP_018164.1 'similar to GB:M55531, GB:U05344, GB:U11839, GB:U11840, GB:U11841, GB:U11842, GB:U11843, SP:P22732, PID:516515, GB:M55531, GB:U05344, GB:U11839, GB:U11840, GB:U11841, GB:U11842, GB:U11843, SP:P22732, and PID:516515; identified by sequence similarity' YP_018166.2 'similar to SP:P19690, PID:216911, and PID:1575711; identified by sequence similarity' YP_018167.1 electron transport protein YP_018168.1 'similar to SP:P46913, SP:P46913, SP:P19690, PID:216911, and PID:1575711; identified by sequence similarity' YP_018170.1 'similar to GB:M55531, GB:U05344, GB:U11839, GB:U11840, GB:U11841, GB:U11842, GB:U11843, SP:P22732, and PID:516515; identified by sequence similarity' YP_018171.1 'similar to GP:15025738, and GP:15025738; identified by sequence similarity' YP_018172.1 'similar to GB:M55531, GB:U05344, GB:U11839, GB:U11840, GB:U11841, GB:U11842, GB:U11843, SP:P22732, and PID:516515; identified by sequence similarity' YP_018173.2 identified by match to PFAM protein family HMM PF04298 YP_018174.1 identified by match to PFAM protein family HMM PF03167 YP_018175.1 identified by match to PFAM protein family HMM PF02588 YP_018176.2 'similar to GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, PID:553291, GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, and PID:553291; identified by sequence similarity' YP_018177.1 'catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis' YP_018178.1 catalyzes the formation of methylglyoxal from glycerone phosphate YP_018180.1 'similar to GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, PID:553291, GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, and PID:553291; identified by sequence similarity' YP_018181.1 'similar to GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, and PID:553291; identified by sequence similarity' YP_018182.1 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity YP_018183.1 'similar to GP:773349, and GP:773349; identified by sequence similarity' YP_018184.2 'catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate' YP_018185.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_018186.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_018187.1 unwinds DNA YP_018188.1 'similar to GB:M31520, GB:U12202, SP:P16632, PID:337506, PID:517221, PID:517222, GB:M31520, GB:U12202, SP:P16632, PID:337506, PID:517221, and PID:517222; identified by sequence similarity' YP_052621.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_018192.1 'similar to GB:D00682, SP:P23528, PID:1177471, PID:219545, and PID:736400; identified by sequence similarity' YP_018193.1 'similar to GB:J02982, GB:M60708, GB:S77082, GB:L31857, SP:P06028, PID:183313, PID:386761, and PID:553313; identified by sequence similarity' YP_018195.1 identified by match to PFAM protein family HMM PF03064 YP_018196.1 'functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC' YP_018197.1 'similar to GB:L11931, GB:L23928, SP:P34896, PID:438634, GB:L11931, GB:L23928, SP:P34896, and PID:438634; identified by sequence similarity' YP_018202.1 'similar to GB:X73637, SP:P51460, PID:498831, GB:X73637, SP:P51460, and PID:498831; identified by sequence similarity' YP_018203.1 'similar to GB:X73637, SP:P51460, and PID:498831; identified by sequence similarity' YP_018205.1 'similar to GB:X61070, and PID:33509; identified by sequence similarity' YP_018206.1 'similar to GB:X73637, SP:P51460, PID:498831, GB:X73637, SP:P51460, and PID:498831; identified by sequence similarity' YP_018207.1 'similar to GB:X74614, SP:Q14990, and PID:474426; identified by sequence similarity' YP_018208.1 'similar to GB:X74614, SP:Q14990, PID:474426, GB:X74614, SP:Q14990, and PID:474426; identified by sequence similarity' YP_018210.1 'similar to SP:P50831, GB:X74614, SP:Q14990, and PID:474426; identified by sequence similarity' YP_018211.1 similar to SP:P42663; identified by sequence similarity YP_018212.1 'similar to GP:15026402, and GP:15026402; identified by sequence similarity' YP_018213.1 'similar to GB:U06204, GB:U06203, GB:U06205, GB:U06226, PID:476248, GB:U06204, GB:U06203, GB:U06205, GB:U06226, and PID:476248; identified by sequence similarity' YP_018214.1 'catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn' YP_018215.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine YP_018216.1 'similar to GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_018217.1 similar to GP:4894302; identified by sequence similarity YP_052622.1 'similar to GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, and PID:553655; identified by sequence similarity' YP_018221.1 similar to SP:P32820; identified by sequence similarity YP_018222.1 'similar to GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, PID:553655, GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, and PID:553655; identified by sequence similarity' YP_018223.1 identified by match to PFAM protein family HMM PF00581 YP_018226.2 'similar to GB:D13144, GB:D13145, GB:D13146, GB:M19650, GB:D28445, SP:P09543, PID:180687, PID:219400, PID:219401, GB:D13144, GB:D13145, GB:D13146, GB:M19650, GB:D28445, SP:P09543, PID:180687, PID:219400, and PID:219401; identified by sequence similarity' YP_018227.1 'similar to SP:P07324, PID:40563, SP:P07324, and PID:40563; identified by sequence similarity' YP_018228.1 'similar to GB:X60459, SP:P17181, PID:1247459, PID:1247461, PID:1567383, PID:1567385, PID:306914, and PID:32672; identified by sequence similarity' YP_018229.1 'similar to GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, PID:553655, GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, and PID:553655; identified by sequence similarity' YP_018231.1 similar to GP:17428556; identified by sequence similarity YP_018232.1 similar to SP:P15555; identified by sequence similarity YP_018235.1 identified by match to PFAM protein family HMM PF02397 YP_018236.1 'similar to GB:X77617, and PID:496605; identified by sequence similarity' YP_018237.1 'similar to SP:P33599, and PID:397900; identified by sequence similarity' YP_018238.1 identified by match to PFAM protein family HMM PF00535 YP_018242.1 similar to GP:13810411; identified by sequence similarity YP_018253.1 identified by match to PFAM protein family HMM PF00583 YP_018254.1 identified by match to PFAM protein family HMM PF00857 YP_018256.2 similar to SP:O29470; identified by sequence similarity YP_018257.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_018258.1 'similar to GP:16413795, and SP:P42096; identified by sequence similarity' YP_018259.1 similar to GP:16410270; identified by sequence similarity YP_018260.3 similar to GP:14702032; identified by sequence similarity YP_018261.1 'similar to GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, PID:553655, GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, and PID:553655; identified by sequence similarity' YP_018263.1 'similar to SP:P35088, and PID:454074; identified by sequence similarity' YP_018264.1 'similar to GB:L09706, GB:L09707, GB:L09708, GB:X04481, GB:M15549, SP:P06681, PID:187765, PID:2347131, PID:298124, PID:34628, PID:467309, PID:553209, GB:L09706, GB:L09707, GB:L09708, GB:X04481, GB:M15549, SP:P06681, PID:187765, PID:2347131, PID:298124, PID:34628, PID:467309, and PID:553209; identified by sequence similarity' YP_022577.1 'similar to GP:2632595, SP:P14027, GB:X15972, and PID:44789; identified by sequence similarity' YP_018268.1 similar to GP:12957715; identified by sequence similarity YP_018269.1 'similar to GB:M89651, GB:D16366, GB:L49169, SP:P53539, PID:1082038, GB:M89651, GB:D16366, GB:L49169, SP:P53539, and PID:1082038; identified by sequence similarity' YP_018270.2 'similar to GB:L05500, SP:Q08828, and PID:349269; identified by sequence similarity' YP_018271.2 'catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate' YP_018274.1 similar to GP:9651949; identified by sequence similarity YP_018276.1 identified by match to TIGR protein family HMM TIGR01689 YP_018277.1 similar to GP:16414705; identified by sequence similarity YP_018278.1 'similar to SP:P27369, PID:154510, SP:P27369, and PID:154510; identified by sequence similarity' YP_018280.1 'similar to GP:16411930, and GP:16411930; identified by sequence similarity' YP_018281.1 'similar to SP:P21504, GB:U00096, PID:1788960, SP:P21504, GB:U00096, and PID:1788960; identified by sequence similarity' YP_018282.1 'similar to SP:Q56691, SP:P06517, GB:X14344, PID:38887, and PID:48044; identified by sequence similarity' YP_018283.1 'similar to GP:17739264, and GP:17739264; identified by sequence similarity' YP_018284.1 similar to GP:3676428; identified by sequence similarity YP_018285.2 identified by match to PFAM protein family HMM PF03092 YP_018286.1 similar to GP:3080560; identified by sequence similarity YP_018287.1 'similar to GB:U04208, PID:436947, GB:M11189, SP:P04190, SP:P14488, and PID:142604; identified by sequence similarity' YP_018288.1 identified by match to PFAM protein family HMM PF00903 YP_018289.1 identified by match to TIGR protein family HMM TIGR01732 YP_018291.1 'similar to GP:4894352, and GP:16410711; identified by sequence similarity' YP_018292.1 'similar to GP:6498258, and GP:6498258; identified by sequence similarity' YP_018293.1 'Homolog of MotA, appears to be involved in motility on surfaces and under different ionic conditions. With MotS (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.' YP_018294.1 'Homolog to MotB, appears to be involved in motility on surfaces and under specific ionic conditions. With MotP (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine' YP_018295.1 'similar to SP:P24072, GB:U07932, SP:P55198, and PID:532762; identified by sequence similarity' YP_018298.1 One of three proteins involved in switching the direction of the flagellar rotation YP_018299.1 identified by match to PFAM protein family HMM PF03011 YP_018301.1 identified by match to PFAM protein family HMM PF03705 YP_018302.1 'similar to GP:16413147, and GP:16413147; identified by sequence similarity' YP_018303.1 'similar to GP:16410092, and GP:16410092; identified by sequence similarity' YP_018305.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_018308.1 involved in flagellin assembly YP_018309.1 identified by match to PFAM protein family HMM PF02561 YP_018310.1 similar to GP:16410098; identified by sequence similarity YP_018311.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod YP_018312.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_018313.1 forms a junction between the M-ring and FlgB during flagella biosynthesis YP_018316.1 One of three proteins involved in switching the direction of the flagellar rotation YP_018317.1 binds to and inhibits the function of flagella specific ATPase FliI YP_018318.1 involved in type III protein export during flagellum assembly YP_018323.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod YP_018324.1 the hook connects flagellar basal body to the flagellar filament YP_018325.1 'similar to GP:16413144, and GP:16413144; identified by sequence similarity' YP_018330.1 'similar to GP:16410063, GB:M74924, SP:P25739, PID:145203, PID:42585, GB:U00096, PID:1651559, PID:1651565, and PID:1787376; identified by sequence similarity' YP_018331.1 similar to GP:16410077; identified by sequence similarity YP_018336.1 similar to GP:16410077; identified by sequence similarity YP_018337.1 identified by match to PFAM protein family HMM PF00534 YP_018342.1 similar to GP:20520197; identified by sequence similarity YP_018345.1 structural flagella protein YP_018346.1 similar to GP:16413177; identified by sequence similarity YP_018350.1 One of three proteins involved in switching the direction of the flagellar rotation YP_018351.1 'similar to GP:16410064, and GP:16410064; identified by sequence similarity' YP_018352.1 'FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus' YP_018353.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus YP_018354.1 'FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus' YP_018356.1 membrane protein involved in the flagellar export apparatus YP_018359.1 makes up the distal portion of the flagellar basal body rod YP_018360.1 similar to GP:10175556; identified by sequence similarity YP_018361.2 'similar to SP:Q08434, GB:S61781, PID:975350, PID:1934778, PID:2231217, SP:Q08434, GB:S61781, PID:975350, PID:1934778, and PID:2231217; identified by sequence similarity' YP_018362.1 identified by match to PFAM protein family HMM PF03591 YP_018365.1 identified by match to PFAM protein family HMM PF00440 YP_018366.1 'similar to SP:P34024, GB:X54618, GB:X60035, and PID:581304; identified by sequence similarity' YP_018367.1 'similar to SP:P10250, PID:44228, SP:P10250, and PID:44228; identified by sequence similarity' YP_018368.1 'similar to GP:17427291, and GP:17427291; identified by sequence similarity' YP_018370.1 identified by match to PFAM protein family HMM PF01381 YP_018371.1 'similar to GB:U04208, PID:436947, GB:U04208, and PID:436947; identified by sequence similarity' YP_022578.1 'similar to GB:X00348, and PID:42164; identified by sequence similarity' YP_018374.1 'similar to SP:P25718, GB:X58994, PID:41966, PID:466709, GB:U00096, and PID:1789995; identified by sequence similarity' YP_018375.1 'similar to GP:15023732, and GP:15023732; identified by sequence similarity' YP_018376.1 'similar to GP:17740469, and GP:17740469; identified by sequence similarity' YP_018377.1 identified by match to PFAM protein family HMM PF03595 YP_018378.1 similar to GP:15079675; identified by sequence similarity YP_018379.1 similar to GP:13278507; identified by sequence similarity YP_018382.1 similar to GP:6468006; identified by sequence similarity YP_018383.2 similar to GP:19712798; identified by sequence similarity YP_018384.1 'similar to SP:P04028, and SP:P04028; identified by sequence similarity' YP_018385.1 similar to GP:10172898; identified by sequence similarity YP_018387.1 similar to GP:10178362; identified by sequence similarity YP_018388.1 identified by match to PFAM protein family HMM PF04039 YP_018392.1 'similar to SP:O05272, and SP:O05272; identified by sequence similarity' YP_018393.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_018395.1 similar to GP:10803137; identified by sequence similarity YP_018396.1 similar to GP:16412063; identified by sequence similarity YP_018398.1 'similar to GP:17985222, and GP:17985222; identified by sequence similarity' YP_052624.1 similar to SP:P96661; identified by sequence similarity YP_018402.1 identified by match to PFAM protein family HMM PF02492 YP_018403.1 identified by match to PFAM protein family HMM PF03600 YP_018404.1 'similar to SP:P30197, GB:X62386, and PID:46970; identified by sequence similarity' YP_018405.1 'similar to SP:P29202, PID:148782, SP:P29202, and PID:148782; identified by sequence similarity' YP_018407.1 similar to SP:P54571; identified by sequence similarity YP_018408.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_018409.1 'similar to GP:15023301, and GP:15023301; identified by sequence similarity' YP_018413.1 similar to GP:10173311; identified by sequence similarity YP_018415.1 similar to GP:3258016; identified by sequence similarity YP_018416.1 similar to GP:17131662; identified by sequence similarity YP_018417.1 identified by match to PFAM protein family HMM PF02683 YP_018418.1 'similar to SP:P07779, GB:X06452, and PID:38742; identified by sequence similarity' YP_018419.1 identified by match to PFAM protein family HMM PF01790 YP_018420.1 'similar to GP:9951617, GB:J02732, SP:P12047, PID:143366, and GB:AL009126; identified by sequence similarity' YP_018421.1 identified by match to PFAM protein family HMM PF02890 YP_018422.1 identified by match to TIGR protein family HMM TIGR01766 YP_018423.1 catalyzes the formation of pyruvate from serine YP_018424.2 'similar to GP:15024013, and GP:15024013; identified by sequence similarity' YP_018428.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: in B. thuringiensis this protein is involved in beta-exotoxin I production YP_018429.1 'similar to GP:15023075, and GP:15023075; identified by sequence similarity' YP_018430.1 'similar to GP:15023074, and GP:1817534; identified by sequence similarity' YP_018431.1 'similar to GP:15023076, and GP:15023076; identified by sequence similarity' YP_018432.1 'similar to GP:15023077, and GP:15023077; identified by sequence similarity' YP_018433.1 identified by match to PFAM protein family HMM PF04290 YP_018434.1 'similar to GP:6759489, and SP:O66043; identified by sequence similarity' YP_018435.1 Catalyzes the phosphorylation of UMP to UDP YP_018436.1 'similar to SP:P39817, and GB:X65027; identified by sequence similarity' YP_018437.1 catalyzes the formation of fumarate from aspartate YP_018438.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate YP_018439.1 identified by match to PFAM protein family HMM PF02518 YP_018440.1 'similar to GP:1769946, GB:L29059, SP:P38583, and PID:456412; identified by sequence similarity' YP_018441.1 'similar to GP:1769947, and GP:1769947; identified by sequence similarity' YP_018443.1 catalyzes the formation of asparagine from aspartate and ammonia YP_018446.1 identified by match to PFAM protein family HMM PF00903 YP_018447.1 'catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.' YP_018451.2 'similar to SP:Q00593, PID:49083, SP:Q00593, and PID:49083; identified by sequence similarity' YP_018452.1 'similar to SP:Q00593, and PID:49083; identified by sequence similarity' YP_018453.1 identified by match to PFAM protein family HMM PF00293 YP_018454.1 similar to SP:Q9RMZ0; identified by sequence similarity YP_018455.2 similar to GP:4894306; identified by sequence similarity YP_018456.1 identified by match to PFAM protein family HMM PF02674 YP_018458.1 'similar to SP:P12049, and GB:AL009126; identified by sequence similarity' YP_018459.1 identified by match to PFAM protein family HMM PF03073 YP_018460.1 similar to SP:P00121; identified by sequence similarity YP_018464.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis YP_018465.1 identified by match to PFAM protein family HMM PF02553 YP_018466.1 similar to GP:16413207; identified by sequence similarity YP_052625.1 'similar to SP:P05845, GB:X17693, and PID:581281; identified by sequence similarity' YP_018471.1 similar to SP:P37887; identified by sequence similarity YP_018472.1 similar to GP:15025507; identified by sequence similarity YP_018473.1 similar to GP:20520233; identified by sequence similarity YP_018474.2 identified by match to PFAM protein family HMM PF03023 YP_018475.1 identified by match to PFAM protein family HMM PF03222 YP_018476.1 identified by match to PFAM protein family HMM PF01522 YP_018478.1 'similar to SP:P21502, GB:X51662, PID:41810, GB:U00096, PID:1778450, PID:1786747, SP:P21502, GB:X51662, PID:41810, GB:U00096, PID:1778450, and PID:1786747; identified by sequence similarity' YP_018479.1 'similar to SP:P27369, PID:154510, SP:P27369, and PID:154510; identified by sequence similarity' YP_018481.1 'similar to GP:16410110, and GP:16410110; identified by sequence similarity' YP_018483.2 similar to GP:6759577; identified by sequence similarity YP_018486.1 identified by match to PFAM protein family HMM PF01625 YP_018488.1 similar to GP:6273669; identified by sequence similarity YP_018489.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_018490.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit YP_018492.1 'catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis' YP_018493.1 'catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis' YP_018494.2 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic YP_018495.1 'similar to GP:4584121, and GP:4584121; identified by sequence similarity' YP_018496.1 similar to GP:4584122; identified by sequence similarity YP_018497.2 similar to GP:4584123; identified by sequence similarity YP_018498.1 similar to GP:14994345; identified by sequence similarity YP_018499.1 similar to GP:15023744; identified by sequence similarity YP_018500.1 identified by match to PFAM protein family HMM PF03583 YP_018501.1 'similar to SP:P08782, GB:X07547, PID:40733, PID:40746, PID:1124828, and PID:1124827; identified by sequence similarity' YP_018502.1 identified by match to PFAM protein family HMM PF04223 YP_018503.1 similar to GP:17132668; identified by sequence similarity YP_018504.1 'similar to SP:P05325, PID:150048, SP:P05325, and PID:150048; identified by sequence similarity' YP_018505.2 similar to SP:O31352; identified by sequence similarity YP_018506.1 'similar to GP:2462115, and GP:19916933; identified by sequence similarity' YP_018510.1 identified by match to PFAM protein family HMM PF04226 YP_018515.1 identified by match to TIGR protein family HMM TIGR00537 YP_018516.1 'similar to GP:10580720, SP:P00464, and SP:P33177; identified by sequence similarity' YP_018517.1 'similar to SP:P23313, SP:P01553, SP:P34071, GB:L13374, GB:L13375, GB:L13376, GB:L13377, GB:L13378, GB:X51661, PID:295141, PID:295143, PID:295149, and PID:46571; identified by sequence similarity' YP_018518.1 'similar to GP:15023431, and GP:15023431; identified by sequence similarity' YP_018522.1 'similar to SP:P11556, GB:X15025, and PID:41509; identified by sequence similarity' YP_018523.1 'similar to SP:P13971, GB:X05813, and PID:42644; identified by sequence similarity' YP_018525.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate YP_018530.1 'similar to GP:5763970, and GP:5763970; identified by sequence similarity' YP_018531.1 'similar to GP:5763971, and GP:5763971; identified by sequence similarity' YP_018533.1 'similar to SP:Q08434, GB:S61781, PID:975350, PID:1934778, and PID:2231217; identified by sequence similarity' YP_018534.1 'similar to SP:P39140, GB:J00117, GB:K03180, GB:K03187, GB:K03188, GB:K03189, GB:X00265, GB:X00266, GB:K03183, GB:K00092, GB:K03182, SP:P01229, SP:P01233, PID:1335012, PID:1335075, PID:180437, PID:180444, and PID:180453; identified by sequence similarity' YP_018536.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate YP_018537.1 similar to GP:1408507; identified by sequence similarity YP_018538.1 Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway YP_018539.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis YP_018540.1 similar to GP:16413815; identified by sequence similarity YP_018541.1 identified by match to PFAM protein family HMM PF04238 YP_018542.1 identified by match to PFAM protein family HMM PF02683 YP_018543.1 identified by match to PFAM protein family HMM PF02012 YP_018544.1 similar to SP:P15034; identified by sequence similarity YP_018545.1 identified by match to TIGR protein family HMM TIGR01480 YP_018546.1 'similar to GP:6224906, and GP:6224906; identified by sequence similarity' YP_018548.1 decatenates replicating daughter chromosomes YP_018549.1 identified by match to PFAM protein family HMM PF03595 YP_018550.1 'similar to GP:2621995, SP:P15109, and PID:151431; identified by sequence similarity' YP_018551.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds YP_018554.1 'similar to GB:M35130, SP:P14638, GB:M31474, and PID:150072; identified by sequence similarity' YP_018556.1 'similar to SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, and PID:1789987; identified by sequence similarity' YP_018557.1 'similar to SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, PID:1789987, SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, and PID:1789987; identified by sequence similarity' YP_018558.1 identified by match to PFAM protein family HMM PF03033 YP_018559.1 'similar to SP:O32256, SP:P06626, GB:U01159, GB:K01147, PID:148642, and PID:398512; identified by sequence similarity' YP_018560.1 identified by match to PFAM protein family HMM PF03466 YP_018561.1 identified by match to PFAM protein family HMM PF02082 YP_018562.1 'similar to GB:M16237, GB:M16243, GB:M16244, GB:M16245, GB:K03212, GB:K03213, GB:K03214, GB:K03215, GB:K03216, GB:K03217, GB:K03218, GB:X04000, GB:X03996, GB:X03998, GB:X03995, GB:X02647, GB:X03999, GB:X03997, SP:P12931, PID:1848077, PID:338460, GB:M16237, GB:M16243, GB:M16244, GB:M16245, GB:K03212, GB:K03213, GB:K03214, GB:K03215, GB:K03216, GB:K03217, GB:K03218, GB:X04000, GB:X03996, GB:X03998, GB:X03995, GB:X02647, GB:X03999, GB:X03997, SP:P12931, PID:1848077, and PID:338460; identified by sequence similarity' YP_018564.1 'similar to GP:16415502, and GP:11595577; identified by sequence similarity' YP_018566.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_018567.1 'similar to SP:P18780, PID:1088257, SP:P18780, and PID:1088257; identified by sequence similarity' YP_018568.2 Converts (S)-lactate and NAD(+) to pyruvate and NADH YP_018569.1 identified by match to PFAM protein family HMM PF03686 YP_018570.2 identified by match to PFAM protein family HMM PF03029 YP_018571.1 similar to GP:4894270; identified by sequence similarity YP_018572.1 'similar to GP:15621033, and GP:15621033; identified by sequence similarity' YP_018573.1 activates fatty acids by binding to coenzyme A YP_018574.1 identified by match to PFAM protein family HMM PF03061 YP_018575.1 Catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP YP_018576.2 'similar to GP:15558974, GB:Z11566, GB:J04991, GB:X53305, GB:M31303, GB:D28428, GB:X94912, SP:P16949, PID:1246757, PID:189388, PID:189426, PID:35595, and PID:57870; identified by sequence similarity' YP_018577.1 'similar to GP:17984192, GB:Z23024, GB:U02570, PID:312212, and PID:409027; identified by sequence similarity' YP_018578.1 'similar to GB:X71398, GB:X69601, GB:X69603, PID:436320, PID:436324, PID:436406, GB:J03910, GB:S68954, SP:P02795, SP:P04731, SP:P04732, SP:P04733, SP:P07438, SP:P13640, SP:P25713, SP:P80294, SP:P80295, SP:P80296, PID:188713, PID:517349, and PID:914851; identified by sequence similarity' YP_018579.1 'similar to GP:3644001, and GP:17984194; identified by sequence similarity' YP_018580.1 'similar to GP:17984493, and GP:17984493; identified by sequence similarity' YP_018581.1 identified by match to PFAM protein family HMM PF02954 YP_018583.1 'similar to SP:P34024, GB:X54618, GB:X60035, PID:581304, SP:P34024, GB:X54618, GB:X60035, and PID:581304; identified by sequence similarity' YP_018584.1 identified by match to PFAM protein family HMM PF02627 YP_018585.1 identified by match to PFAM protein family HMM PF03551 YP_018586.1 identified by match to PFAM protein family HMM PF00296 YP_018587.1 similar to GP:16412218; identified by sequence similarity YP_018588.1 identified by match to PFAM protein family HMM PF04247 YP_018589.1 similar to GP:16415399; identified by sequence similarity YP_018590.1 'similar to SP:P06519, PID:455334, and PID:1145786; identified by sequence similarity' YP_018592.1 'similar to GB:X70940, GB:L10340, SP:P04720, SP:P54266, SP:Q05639, PID:1220311, PID:38456, PID:927065, and PID:927067; identified by sequence similarity' YP_018593.1 'similar to GB:V00497, GB:M25113, GB:U01317, GB:M36640, GB:M25660, GB:A01592, GB:A18171, GB:M11428, GB:M25079, GB:V00500, GB:L48213, GB:U20223, GB:V00499, GB:V00498, SP:P02023, SP:P02042, PID:1066755, PID:1066758, PID:1066761, PID:1066764, PID:1066767, PID:1066770, PID:1066773, PID:1066776, PID:1066779, and PID:455998; identified by sequence similarity' YP_018594.1 'similar to GB:Y00636, GB:X06296, SP:P19256, PID:34347, PID:34350, and PID:540515; identified by sequence similarity' YP_018595.1 similar to GP:15026393; identified by sequence similarity YP_018596.2 'similar to GP:6224906, and GP:6224906; identified by sequence similarity' YP_018597.1 identified by match to TIGR protein family HMM TIGR01738 YP_018600.3 'similar to GP:16412071, and GP:16412071; identified by sequence similarity' YP_018601.1 similar to GP:16415263; identified by sequence similarity YP_018602.1 similar to GP:16409855; identified by sequence similarity YP_018603.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_018607.1 identified by match to PFAM protein family HMM PF01522 YP_018610.1 'similar to GP:15023302, and GP:15023302; identified by sequence similarity' YP_018612.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_018613.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_018614.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate YP_018615.1 similar to GP:10176322; identified by sequence similarity YP_018617.1 similar to GP:16412006; identified by sequence similarity YP_018619.1 'similar to SP:Q9TLQ4, and SP:Q9TLQ4; identified by sequence similarity' YP_018620.1 similar to GP:16415180; identified by sequence similarity YP_018621.1 'similar to SP:Q04730, and PID:142946; identified by sequence similarity' YP_018622.1 'similar to GB:X54162, SP:P29536, and PID:28969; identified by sequence similarity' YP_018623.1 similar to SP:Q45514; identified by sequence similarity YP_018624.2 'similar to SP:P20628, and PID:142038; identified by sequence similarity' YP_018625.1 similar to GP:17129739; identified by sequence similarity YP_018626.2 identified by match to PFAM protein family HMM PF04183 YP_018627.1 activates fatty acids by binding to coenzyme A YP_018628.1 'Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides' YP_018630.1 similar to GP:17741477; identified by sequence similarity YP_018631.1 identified by match to PFAM protein family HMM PF00269 YP_018635.1 'similar to SP:P06008, GB:X02659, and PID:46478; identified by sequence similarity' YP_018638.1 'similar to GB:M36711, GB:M61156, GB:X77343, and SP:P05549; identified by sequence similarity' YP_018640.1 'similar to GP:16415008, and GP:15023710; identified by sequence similarity' YP_018641.1 similar to GP:14994320; identified by sequence similarity YP_018643.1 identified by match to TIGR protein family HMM TIGR00586 YP_018644.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_018647.1 'similar to GB:D14697, GB:J05262, GB:M29863, SP:P14324, PID:182399, PID:182405, PID:285965, and PID:285965; identified by sequence similarity' YP_018648.1 'similar to SP:P11018, GB:U07561, and PID:514266; identified by sequence similarity' YP_018649.1 'similar to GP:17130957, and GP:17130957; identified by sequence similarity' YP_018650.1 'similar to GB:L07807, GB:L07810, GB:L07808, GB:L07809, SP:Q05193, PID:181849, and PID:181851; identified by sequence similarity' YP_018651.1 'similar to SP:P13295, GB:X15079, PID:48691, and PID:49406; identified by sequence similarity' YP_018653.1 'similar to SP:P14878, GB:X06083, PID:43373, SP:P14878, GB:X06083, and PID:43373; identified by sequence similarity' YP_018654.1 'similar to GB:M16442, PID:143790, GB:M16442, and PID:143790; identified by sequence similarity' YP_018655.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity YP_018656.1 'similar to GB:Z14244, SP:P24311, PID:30151, GB:Z14244, SP:P24311, and PID:30151; identified by sequence similarity' YP_018659.1 identified by match to PFAM protein family HMM PF03334 YP_018660.1 similar to SP:P80879; identified by sequence similarity YP_018662.1 identified by match to PFAM protein family HMM PF02230 YP_018663.1 identified by match to PFAM protein family HMM PF00296 YP_018665.2 similar to GP:2462090; identified by sequence similarity YP_018666.1 'similar to GB:M31887, SP:P16626, and PID:152502; identified by sequence similarity' YP_018667.1 'similar to GB:M89470, GB:L25597, SP:Q02962, PID:438650, and PID:553607; identified by sequence similarity' YP_018668.1 similar to GP:17130841; identified by sequence similarity YP_018669.1 similar to SP:P39909; identified by sequence similarity YP_018672.1 'similar to SP:P16084, and PID:144162; identified by sequence similarity' YP_018673.1 similar to GP:21685513; identified by sequence similarity YP_018674.1 'similar to SP:P33163, and SP:P33163; identified by sequence similarity' YP_018675.1 similar to GP:16411107; identified by sequence similarity YP_018676.1 similar to GP:13592385; identified by sequence similarity YP_018677.1 'catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds' YP_018678.1 'similar to GP:15026336, and GP:15026336; identified by sequence similarity' YP_018680.1 'similar to GP:10717143, and GP:10717143; identified by sequence similarity' YP_018681.1 catalyzes resistance to fosfomycin by the addition of a thiol cofactor YP_018682.1 'similar to GB:M14340, SP:P09359, GB:S56948, PID:153607, GB:M14340, SP:P09359, GB:S56948, and PID:153607; identified by sequence similarity' YP_018683.2 similar to GP:12751461; identified by sequence similarity YP_018685.1 'similar to SP:P26606, GB:D11109, PID:216433, PID:466645, GB:U00096, and PID:1789924; identified by sequence similarity' YP_018686.1 identified by match to PFAM protein family HMM PF00293 YP_018687.1 'similar to SP:P03064, PID:1045524, PID:151680, PID:501832, and PID:1053000; identified by sequence similarity' YP_018688.1 identified by match to PFAM protein family HMM PF03023 YP_018689.2 'similar to GP:16410466, and GP:16410466; identified by sequence similarity' YP_018690.1 'similar to SP:P30197, GB:X62386, and PID:46970; identified by sequence similarity' YP_018691.1 'similar to SP:P30197, GB:X62386, PID:46970, SP:P30197, GB:X62386, and PID:46970; identified by sequence similarity' YP_018692.1 similar to SP:P49851; identified by sequence similarity YP_018698.1 'similar to SP:P30043, SP:P05343, GB:X12600, PID:43830, PID:43879, and PID:149343; identified by sequence similarity' YP_018699.1 'similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, and PID:553171; identified by sequence similarity' YP_018700.1 similar to SP:P80259; identified by sequence similarity YP_018702.1 similar to GP:16413002; identified by sequence similarity YP_018704.2 'similar to SP:P13954, GB:Y07536, PID:46552, and PID:46749; identified by sequence similarity' YP_018705.1 similar to SP:P37584; identified by sequence similarity YP_018706.1 'similar to GB:K02673, SP:P05041, GB:U07748, GB:U07749, GB:U07755, GB:U07756, GB:U07757, GB:U07758, GB:U07759, GB:U07760, GB:U07761, GB:U07762, GB:U07764, PID:147058, PID:468153, PID:468155, PID:468165, PID:468179, PID:468181, PID:468167, PID:468169, PID:468171, PID:468173, PID:468175, PID:468177, GB:U00096, PID:1736449, PID:1788114, GB:K02673, SP:P05041, GB:U07748, GB:U07749, GB:U07755, GB:U07756, GB:U07757, GB:U07758, GB:U07759, GB:U07760, GB:U07761, GB:U07762, GB:U07764, PID:147058, PID:468153, PID:468155, PID:468165, PID:468179, PID:468181, PID:468167, PID:468169, PID:468171, PID:468173, PID:468175, PID:468177, GB:U00096, PID:1736449, and PID:1788114; identified by sequence similarity' YP_018709.1 similar to GP:3724051; identified by sequence similarity YP_018710.2 identified by match to PFAM protein family HMM PF00583 YP_018711.1 'similar to SP:P07126, GB:X06084, GB:X07013, and PID:43377; identified by sequence similarity' YP_018712.1 identified by match to PFAM protein family HMM PF00293 YP_018713.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_018714.1 'similar to SP:P24734, GB:X54719, GB:X67095, PID:581421, and PID:581422; identified by sequence similarity' YP_018715.1 'similar to GB:L19532, PID:388269, PID:475429, GB:L19532, PID:388269, and PID:475429; identified by sequence similarity' YP_018716.1 similar to GP:15023966; identified by sequence similarity YP_018718.1 similar to GP:15026080; identified by sequence similarity YP_018719.2 identified by match to TIGR protein family HMM TIGR01670 YP_018721.1 similar to SP:P10724; identified by sequence similarity YP_018722.1 'similar to GP:17131733, SP:P19215, GB:U13997, GB:U13993, GB:U13994, GB:U13995, GB:U13996, GB:U13998, and PID:537267; identified by sequence similarity' YP_018723.1 similar to GP:15026749; identified by sequence similarity YP_018724.1 'similar to GB:U00018, PID:467052, GB:U00018, and PID:467052; identified by sequence similarity' YP_018725.1 similar to GP:15025750; identified by sequence similarity YP_018726.1 'similar to GP:10175586, and GP:10175586; identified by sequence similarity' YP_018727.1 'similar to SP:P05021, GB:X02826, PID:42609, GB:U00096, PID:1651460, and PID:1787177; identified by sequence similarity' YP_018728.1 identified by match to PFAM protein family HMM PF00583 YP_018732.1 identified by match to PFAM protein family HMM PF00583 YP_018734.1 similar to GP:16409991; identified by sequence similarity YP_018735.3 'similar to GB:L02630, SP:P31734, GB:X59079, PID:155382, and PID:48899; identified by sequence similarity' YP_018738.1 'similar to GP:2654481, and GP:2654481; identified by sequence similarity' YP_018742.2 'similar to SP:P02372, PID:43143, GB:U00096, and PID:1788961; identified by sequence similarity' YP_018743.2 'similar to GP:16410254, and GP:16410254; identified by sequence similarity' YP_018746.1 'similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, and PID:553171; identified by sequence similarity' YP_018747.2 'similar to GB:U09881, and PID:497332; identified by sequence similarity' YP_018748.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate YP_018751.1 'similar to SP:P24734, GB:X54719, GB:X67095, PID:581421, PID:581422, SP:P24734, GB:X54719, GB:X67095, PID:581421, and PID:581422; identified by sequence similarity' YP_018754.1 similar to GP:16411322; identified by sequence similarity YP_018755.1 similar to GP:22776717; identified by sequence similarity YP_018756.1 identified by match to TIGR protein family HMM TIGR01751 YP_018757.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_018760.1 identified by match to PFAM protein family HMM PF00753 YP_018762.1 'similar to GB:M94582, GB:M99412, GB:U11869, GB:U11874, GB:U11872, GB:U11873, GB:U11875, GB:U11876, GB:U11877, GB:U11878, GB:M73969, GB:U11866, GB:U11867, GB:U11868, GB:L19593, SP:P25025, PID:1109691, PID:186378, PID:511803, PID:559054, PID:576679, GB:M94582, GB:M99412, GB:U11869, GB:U11874, GB:U11872, GB:U11873, GB:U11875, GB:U11876, GB:U11877, GB:U11878, GB:M73969, GB:U11866, GB:U11867, GB:U11868, GB:L19593, SP:P25025, PID:1109691, PID:186378, PID:511803, PID:559054, and PID:576679; identified by sequence similarity' YP_018763.1 'similar to SP:P25666, PID:1209298, PID:466756, GB:U00096, and PID:1790048; identified by sequence similarity' YP_018764.2 'similar to SP:P06519, PID:455334, PID:1145786, SP:P06519, PID:455334, and PID:1145786; identified by sequence similarity' YP_018765.1 'similar to SP:P25666, PID:1209298, PID:466756, GB:U00096, and PID:1790048; identified by sequence similarity' YP_018768.1 similar to GP:1009366; identified by sequence similarity YP_018769.2 similar to SP:P42176; identified by sequence similarity YP_018770.1 similar to SP:P42178; identified by sequence similarity YP_018771.1 identified by match to TIGR protein family HMM TIGR00351 YP_018772.1 identified by match to PFAM protein family HMM PF00392 YP_018773.1 identified by match to PFAM protein family HMM PF03205 YP_018775.1 similar to SP:P46908; identified by sequence similarity YP_018776.2 'similar to SP:P39757, GB:X64364, GB:L10240, GB:D45131, SP:P35613, PID:1209374, PID:1220307, PID:34449, PID:409357, and PID:633069; identified by sequence similarity' YP_018777.1 catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways YP_018778.1 'similar to GP:2633799, SP:P23761, PID:296728, and PID:58350; identified by sequence similarity' YP_018779.1 similar to GP:10175641; identified by sequence similarity YP_018780.1 'similar to SP:P30748, SP:P29438, GB:M17353, and PID:407187; identified by sequence similarity' YP_018781.1 'similar to GB:L07807, GB:L07810, GB:L07808, GB:L07809, SP:Q05193, PID:181849, and PID:181851; identified by sequence similarity' YP_018782.1 identified by match to PFAM protein family HMM PF03547 YP_018783.2 similar to GP:6939620; identified by sequence similarity YP_018785.1 catalyzes the formation of siroheme from precorrin-2 YP_018786.1 'similar to GP:10174113, and GP:10174113; identified by sequence similarity' YP_018787.1 this protein contains the C-terminal section of uroporphyrinogen-III methyltransferase fused with uroporphyrinogen-III synthase; studies on Clostridium josui indicate that this protein has uroporphyrinogen-III methylase activity; functions in tetrapyrrole and heme biosynthesis YP_018788.1 'similar to GB:M19480, GB:M19481, SP:P19883, and PID:182721; identified by sequence similarity' YP_018789.1 'similar to GB:M19480, GB:M19481, SP:P19883, and PID:182721; identified by sequence similarity' YP_018790.1 similar to GP:15022894; identified by sequence similarity YP_018793.1 similar to GP:21323723; identified by sequence similarity YP_018796.1 'similar to SP:P35029, GB:X59038, PID:47504, SP:P35029, GB:X59038, and PID:47504; identified by sequence similarity' YP_018797.1 similar to GP:10174514; identified by sequence similarity YP_018799.1 identified by match to PFAM protein family HMM PF04232 YP_018804.1 'similar to GB:D11037, PID:474386, GB:D11037, and PID:474386; identified by sequence similarity' YP_018806.1 identified by match to PFAM protein family HMM PF01966 YP_018807.1 'similar to GP:16414490, SP:P05845, GB:X17693, and PID:581281; identified by sequence similarity' YP_018808.1 identified by match to PFAM protein family HMM PF03772 YP_018810.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA YP_018811.1 identified by match to PFAM protein family HMM PF00440 YP_018814.3 'similar to GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, PID:553655, GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, and PID:553655; identified by sequence similarity' YP_018815.1 identified by match to PFAM protein family HMM PF04134 YP_018816.1 'similar to GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, PID:553655, GB:X14474, GB:X61371, GB:X61375, GB:X61372, GB:X61373, GB:X61374, GB:J03778, GB:M93652, GB:M25298, SP:P10636, SP:P18518, and PID:553655; identified by sequence similarity' YP_018817.1 identified by match to PFAM protein family HMM PF01945 YP_018818.1 'catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase' YP_018819.2 'similar to GP:9837390, and GP:9837390; identified by sequence similarity' YP_022595.1 identified by match to PFAM protein family HMM PF03988 YP_018820.1 similar to GP:19914826; identified by sequence similarity YP_018823.1 'IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin)' YP_018824.1 similar to GP:15025540; identified by sequence similarity YP_018827.1 'catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes' YP_018829.1 'similar to GB:S66933, and PID:558962; identified by sequence similarity' YP_018830.1 similar to GP:15023261; identified by sequence similarity YP_018831.2 similar to GP:15022860; identified by sequence similarity YP_018832.1 'similar to GP:15023262, and GP:15023262; identified by sequence similarity' YP_018833.1 identified by match to PFAM protein family HMM PF00069 YP_018834.1 identified by match to PFAM protein family HMM PF00515 YP_018839.1 similar to GP:16503749; identified by sequence similarity YP_018840.2 similar to GP:15023262; identified by sequence similarity YP_018841.1 identified by match to TIGR protein family HMM TIGR01784 YP_018843.1 similar to GP:6681569; identified by sequence similarity YP_018844.1 identified by match to PFAM protein family HMM PF01548 YP_018845.1 similar to GP:13310614; identified by sequence similarity YP_018848.1 'similar to GB:U04442, and PID:520418; identified by sequence similarity' YP_018852.1 'similar to GP:4539214, and GP:4539214; identified by sequence similarity' YP_018853.1 similar to GP:4539213; identified by sequence similarity YP_018854.1 identified by match to PFAM protein family HMM PF00486 YP_018855.1 identified by match to TIGR protein family HMM TIGR01386 YP_018856.1 'similar to SP:P00547, PID:529240, PID:537246, GB:U00096, PID:1786184, SP:P00547, PID:529240, PID:537246, GB:U00096, and PID:1786184; identified by sequence similarity' YP_018858.1 identified by match to PFAM protein family HMM PF03208 YP_018859.2 identified by match to PFAM protein family HMM PF03096 YP_018861.1 identified by match to PFAM protein family HMM PF04057 YP_018862.1 similar to GP:15023271; identified by sequence similarity YP_022597.1 'similar to GB:M14059, GB:M15801, GB:M10905, GB:X02761, GB:M14060, GB:A14133, GB:X04530, GB:K00055, GB:K00799, GB:M27589, GB:M12549, SP:P02751, PID:182704, and PID:553295; identified by sequence similarity' YP_018865.1 similar to GP:48651; identified by sequence similarity YP_018866.1 similar to GP:15980736; identified by sequence similarity YP_018867.1 identified by match to TIGR protein family HMM TIGR00104 YP_018868.1 'similar to SP:P26997, PID:217186, SP:P26997, and PID:217186; identified by sequence similarity' YP_018871.1 identified by match to PFAM protein family HMM PF00583 YP_018872.1 'similar to SP:P24178, GB:X57403, PID:41233, GB:U00096, and PID:1788815; identified by sequence similarity' YP_018876.2 identified by match to TIGR protein family HMM TIGR01685 YP_018878.1 similar to GP:19917050; identified by sequence similarity YP_018879.1 identified by match to PFAM protein family HMM PF03572 YP_018880.1 identified by match to PFAM protein family HMM PF00144 YP_018881.1 'ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived' YP_018882.1 'similar to SP:P11045, GB:M99701, and PID:521207; identified by sequence similarity' YP_018883.1 'similar to GP:7707810, and GP:7707810; identified by sequence similarity' YP_018885.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds YP_018886.1 similar to GP:15023870; identified by sequence similarity YP_018887.1 'similar to SP:P54176, GB:M27339, and PID:540472; identified by sequence similarity' YP_018888.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_018889.1 'similar to SP:P42252, GB:M13300, GB:M13301, GB:M13302, GB:M13303, GB:M13304, GB:M13305, GB:X54705, GB:X54675, GB:Z68193, SP:P04000, SP:P04001, PID:1122284, and PID:180703; identified by sequence similarity' YP_018893.1 'similar to GP:16411317, and GP:16411317; identified by sequence similarity' YP_018894.1 similar to GP:10175738; identified by sequence similarity YP_018895.1 'similar to GB:X59871, GB:X59869, GB:X59870, SP:P36402, PID:36788, PID:619882, and PID:619884; identified by sequence similarity' YP_018896.1 identified by match to PFAM protein family HMM PF00011 YP_018897.1 'similar to GP:16411099, and SP:P54420; identified by sequence similarity' YP_018898.1 identified by match to PFAM protein family HMM PF00583 YP_018900.1 'similar to SP:P21324, and PID:145151; identified by sequence similarity' YP_018901.1 catalyzes the transamination of D-amino acids and their alpha-keto acids YP_018902.1 similar to GP:15024358; identified by sequence similarity YP_018903.1 similar to GP:16415146; identified by sequence similarity YP_018907.1 similar to SP:O30851; identified by sequence similarity YP_018908.1 'similar to SP:Q05372, and PID:49219; identified by sequence similarity' YP_018909.1 'similar to GP:2226140, SP:P21879, GB:X55669, PID:39959, PID:467399, and GB:AL009126; identified by sequence similarity' YP_018910.1 identified by match to PFAM protein family HMM PF04218 YP_018913.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs YP_018924.1 identified by match to PFAM protein family HMM PF00535 YP_018925.1 identified by match to PFAM protein family HMM PF00534 YP_018926.1 'similar to GP:10281002, and GP:10281002; identified by sequence similarity' YP_018927.1 identified by match to PFAM protein family HMM PF03209 YP_018928.1 'similar to GP:16415058, and GP:16415058; identified by sequence similarity' YP_018929.1 'similar to GP:16410850, and GP:16410850; identified by sequence similarity' YP_018930.1 'similar to GP:16410851, and GP:16410851; identified by sequence similarity' YP_018931.2 'similar to GB:M28829, PID:551976, GB:Z21958, GB:M25668, GB:L12563, GB:U01828, SP:P11137, GB:U32995, GB:U34059, GB:U34061, GB:U34064, GB:U34065, GB:U34069, GB:U34060, GB:U34062, GB:U34063, GB:U34066, PID:1850617, PID:187381, and PID:409875; identified by sequence similarity' YP_018932.1 'similar to GB:Z27509, PID:185358, PID:505446, GB:Z27509, PID:185358, and PID:505446; identified by sequence similarity' YP_018933.2 'similar to GP:4584112, and SP:P00318; identified by sequence similarity' YP_018936.1 remodeling and anchoring of the chromosome protein; in Bacillus subtilis this protein functions in polar chromosome segregation during sporulation; binds inverted sequence motifs called ram along the chromosome; condenses DNA via RacA-RacA interactions YP_018937.2 identified by match to PFAM protein family HMM PF03025 YP_018938.1 'similar to GB:D00496, SP:P17217, and PID:216757; identified by sequence similarity' YP_018940.1 'similar to GB:X13223, GB:D29805, GB:M13701, GB:U10472, GB:X55415, SP:P15291, PID:1926411, PID:29424, PID:306813, PID:306814, PID:32058, PID:32059, PID:34990, PID:386759, PID:500808, PID:500810, PID:500812, PID:705388, and PID:903740; identified by sequence similarity' YP_018942.1 identified by match to TIGR protein family HMM TIGR01822 YP_018943.1 similar to SP:P76458; identified by sequence similarity YP_018944.1 similar to GP:7292189; identified by sequence similarity YP_018945.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_018946.1 'similar to SP:P22340, GB:M63038, SP:P24262, GB:X57400, GB:X67750, PID:154362, PID:155143, and PID:48830; identified by sequence similarity' YP_018947.1 'similar to SP:P38022, GB:M11220, GB:M10663, GB:M11734, GB:M13207, GB:X03021, SP:P04141, PID:181146, PID:181148, PID:181150, PID:183364, PID:2297274, and PID:31859; identified by sequence similarity' YP_018948.1 'similar to GP:5410603, SP:P22340, GB:M63038, SP:P24262, GB:X57400, GB:X67750, PID:154362, PID:155143, and PID:48830; identified by sequence similarity' YP_018949.1 'similar to GP:2529468, and GP:2529468; identified by sequence similarity' YP_018950.1 'similar to SP:P37623, PID:466611, GB:U00096, and PID:1789886; identified by sequence similarity' YP_018951.1 'similar to SP:P37623, PID:466611, GB:U00096, PID:1789886, SP:P37623, PID:466611, GB:U00096, and PID:1789886; identified by sequence similarity' YP_018953.1 'similar to SP:P37623, PID:466611, GB:U00096, PID:1789886, SP:P37623, PID:466611, GB:U00096, and PID:1789886; identified by sequence similarity' YP_018955.1 'similar to SP:P37598, GB:U00096, PID:1742732, PID:1742742, PID:1787949, SP:P37598, GB:U00096, PID:1742732, PID:1742742, and PID:1787949; identified by sequence similarity' YP_018956.1 'similar to GP:3522984, and GP:3522984; identified by sequence similarity' YP_018957.1 identified by match to PFAM protein family HMM PF01569 YP_018958.2 identified by match to PFAM protein family HMM PF03824 YP_018959.1 'similar to SP:P28079, GB:X63903, and PID:48099; identified by sequence similarity' YP_018960.1 similar to GP:14021441; identified by sequence similarity YP_018961.1 'similar to GB:M37981, GB:X53559, GB:Y08418, SP:P32297, PID:1702908, PID:189253, PID:34986, GB:M37981, GB:X53559, GB:Y08418, SP:P32297, PID:1702908, PID:189253, and PID:34986; identified by sequence similarity' YP_018962.1 'similar to GP:4894314, and GP:4894314; identified by sequence similarity' YP_018963.1 similar to GP:4894270; identified by sequence similarity YP_018964.1 identified by match to PFAM protein family HMM PF04065 YP_018965.1 'similar to GB:M22404, and PID:188866; identified by sequence similarity' YP_018966.1 'similar to SP:Q57720, GB:L23274, and PID:553462; identified by sequence similarity' YP_018968.1 identified by match to PFAM protein family HMM PF01580 YP_018973.1 identified by match to TIGR protein family HMM TIGR00004 YP_018976.1 'similar to GP:15024130, and GP:15024130; identified by sequence similarity' YP_018978.1 'similar to GP:6723450, and GP:6723450; identified by sequence similarity' YP_018980.1 identified by match to PFAM protein family HMM PF00386 YP_018981.2 cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein YP_018984.1 'similar to GP:6470221, and GP:6470221; identified by sequence similarity' YP_018985.1 'similar to GP:2984723, and GP:2984723; identified by sequence similarity' YP_018988.2 similar to GP:17135141; identified by sequence similarity YP_022602.1 similar to GP:15980428; identified by sequence similarity YP_018989.1 identified by match to PFAM protein family HMM PF03593 YP_018990.1 identified by match to PFAM protein family HMM PF03209 YP_018991.1 'similar to SP:P35092, SP:P35093, SP:P35092, and SP:P35093; identified by sequence similarity' YP_018992.1 'forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle, glyoxylate cycle and respiration' YP_018993.1 'functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C' YP_018994.1 'similar to SP:P54528, GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_018996.1 similar to SP:P45857; identified by sequence similarity YP_018997.1 'similar to SP:P23523, GB:X57748, GB:X70872, SP:P27918, PID:2253267, PID:2257937, PID:2257939, PID:2257941, PID:35678, PID:35680, and PID:517063; identified by sequence similarity' YP_018998.1 identified by match to TIGR protein family HMM TIGR01804 YP_018999.1 identified by match to TIGR protein family HMM TIGR00948 YP_019000.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA YP_019002.1 'similar to SP:P06173, GB:M38311, PID:154355, PID:47919, SP:P06173, GB:M38311, PID:154355, and PID:47919; identified by sequence similarity' YP_019003.1 similar to SP:P23479; identified by sequence similarity YP_019004.1 similar to GP:16411081; identified by sequence similarity YP_019007.1 'similar to GP:4894353, and GP:5802941; identified by sequence similarity' YP_019008.1 similar to GP:16410403; identified by sequence similarity YP_019011.1 similar to GP:1235993; identified by sequence similarity YP_019012.1 'catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin' YP_019013.1 'synthesizes isochorismate from chorismate as part of the biosynthesis of the siderophore 2,3-dihydroxybenzoate; can also be used in menaquinone synthesis' YP_019014.1 'similar to GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, PID:485909, GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, and PID:485909; identified by sequence similarity' YP_019015.1 'similar to GB:X73039, SP:P35715, SP:P35717, SP:P48431, PID:312152, PID:854182, PID:938229, PID:938234, GB:X73039, SP:P35715, SP:P35717, SP:P48431, PID:312152, PID:854182, PID:938229, and PID:938234; identified by sequence similarity' YP_019016.1 'similar to GP:5919203, and GP:5919203; identified by sequence similarity' YP_019017.1 'similar to GB:D12697, SP:P46082, and PID:285708; identified by sequence similarity' YP_052626.1 'similar to GB:L11931, GB:L23928, SP:P34896, PID:438634, GB:L11931, GB:L23928, SP:P34896, and PID:438634; identified by sequence similarity' YP_019019.1 similar to SP:P39135; identified by sequence similarity YP_019020.1 'similar to SP:P29820, PID:46489, SP:P29820, and PID:46489; identified by sequence similarity' YP_019021.1 'similar to GP:207999, and SP:P08821; identified by sequence similarity' YP_019023.1 'similar to GB:X15341, SP:P12074, PID:30153, GB:X15341, SP:P12074, and PID:30153; identified by sequence similarity' YP_019024.1 'similar to GP:5726590, and GP:5726590; identified by sequence similarity' YP_019025.1 identified by match to PFAM protein family HMM PF03845 YP_019028.1 'similar to GP:2995315, and GP:2995315; identified by sequence similarity' YP_019030.1 'catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); Bacillus have two copies of the threonyl-tRNA synthetase, threonine starvation induces both proteins' YP_019033.1 'similar to GP:16411585, and GP:16411585; identified by sequence similarity' YP_019034.1 'similar to SP:P27000, and PID:48242; identified by sequence similarity' YP_019035.3 'similar to GP:4126667, and GP:4126667; identified by sequence similarity' YP_019038.1 similar to GP:17129818; identified by sequence similarity YP_019039.1 identified by match to PFAM protein family HMM PF01209 YP_019042.1 identified by match to PFAM protein family HMM PF00753 YP_019043.1 identified by match to PFAM protein family HMM PF01156 YP_019045.1 'similar to GB:M29874, GB:M29873, SP:P20813, PID:181294, GB:M29874, GB:M29873, SP:P20813, and PID:181294; identified by sequence similarity' YP_019046.1 similar to GP:15026330; identified by sequence similarity YP_019047.1 'similar to GP:15024323, and GP:15024323; identified by sequence similarity' YP_019048.1 identified by match to PFAM protein family HMM PF02796 YP_019049.1 'similar to GP:16415079, and SP:Q53902; identified by sequence similarity' YP_019051.1 'similar to GB:M15881, SP:P07911, PID:340164, PID:340166, GB:X69111, GB:X66924, GB:A17548, GB:D28449, GB:X73428, SP:Q02535, PID:313213, PID:32295, PID:395338, PID:490013, and PID:512437; identified by sequence similarity' YP_019052.3 identified by match to PFAM protein family HMM PF00583 YP_019053.1 identified by match to PFAM protein family HMM PF00805 YP_019054.1 identified by match to PFAM protein family HMM PF00583 YP_019055.1 identified by match to PFAM protein family HMM PF04279 YP_019056.1 identified by match to PFAM protein family HMM PF03079 YP_019059.1 identified by match to PFAM protein family HMM PF03096 YP_019060.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX YP_019062.1 'similar to SP:P23313, SP:P01553, SP:P34071, GB:L13374, GB:L13375, GB:L13376, GB:L13377, GB:L13378, GB:X51661, PID:295141, PID:295143, PID:295149, and PID:46571; identified by sequence similarity' YP_019063.1 'similar to SP:P22639, PID:1088261, SP:P22639, and PID:1088261; identified by sequence similarity' YP_019064.1 'similar to SP:P35088, PID:454074, SP:P35088, and PID:454074; identified by sequence similarity' YP_019068.1 'similar to SP:P58009, and SP:P58009; identified by sequence similarity' YP_019069.1 'similar to GB:Z25430, and PID:405739; identified by sequence similarity' YP_019076.1 'similar to GP:15026432, and SP:P94501; identified by sequence similarity' YP_019077.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_019078.1 identified by match to PFAM protein family HMM PF03417 YP_019080.1 'similar to GP:1657534, and SP:P27111; identified by sequence similarity' YP_019081.1 'similar to SP:P37820, PID:396204, SP:P37820, and PID:396204; identified by sequence similarity' YP_019082.1 'similar to GB:M77142, SP:P31483, GB:M77142, and SP:P31483; identified by sequence similarity' YP_019084.1 'similar to GB:L24911, and PID:406064; identified by sequence similarity' YP_019085.1 'similar to GB:M34570, GB:X15882, GB:X15977, GB:M34572, GB:M34573, GB:M34571, PID:179709, PID:179711, PID:179713, and PID:30045; identified by sequence similarity' YP_019086.1 'similar to GP:1865705, and GP:1865705; identified by sequence similarity' YP_019087.1 similar to GP:3298508; identified by sequence similarity YP_019088.1 'similar to GP:3318590, and GP:3318590; identified by sequence similarity' YP_019090.1 identified by match to PFAM protein family HMM PF01391 YP_019093.1 identified by match to TIGR protein family HMM TIGR01813 YP_019094.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_019097.2 similar to GP:5091498; identified by sequence similarity YP_019098.1 identified by match to PFAM protein family HMM PF03357 YP_019101.1 identified by match to TIGR protein family HMM TIGR00853 YP_019102.1 similar to SP:P46317; identified by sequence similarity YP_022609.1 'similar to GP:7293314, and GP:16414880; identified by sequence similarity' YP_019104.1 'catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling' YP_019105.1 similar to GP:15023013; identified by sequence similarity YP_019106.2 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX YP_019107.1 identified by match to PFAM protein family HMM PF00266 YP_019108.1 catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic YP_019112.1 similar to GP:15024323; identified by sequence similarity YP_019114.1 similar to GP:4894289; identified by sequence similarity YP_019115.1 similar to GP:15023670; identified by sequence similarity YP_019118.1 'similar to GP:15026705, and GP:15026705; identified by sequence similarity' YP_019119.1 'similar to GB:U04208, and PID:436947; identified by sequence similarity' YP_019120.2 similar to GP:15024483; identified by sequence similarity YP_019121.1 identified by match to TIGR protein family HMM TIGR01842 YP_019122.1 identified by match to PFAM protein family HMM PF03848 YP_019124.1 'similar to SP:P27000, PID:48242, SP:P27000, and PID:48242; identified by sequence similarity' YP_019125.1 'similar to GP:14994341, and SP:P23234; identified by sequence similarity' YP_019126.1 similar to GP:14994340; identified by sequence similarity YP_019127.1 '2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate' YP_019134.1 similar to SP:P15288; identified by sequence similarity YP_019137.1 'similar to GB:M26396, SP:P22849, and PID:516602; identified by sequence similarity' YP_019138.1 'similar to SP:P24734, GB:X54719, GB:X67095, PID:581421, and PID:581422; identified by sequence similarity' YP_019140.1 identified by match to PFAM protein family HMM PF03717 YP_019143.2 'similar to GP:14091410, and SP:P10424; identified by sequence similarity' YP_019144.1 'similar to SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, and PID:1314251; identified by sequence similarity' YP_019145.1 'similar to SP:P37947, SP:P06008, GB:X02659, and PID:46478; identified by sequence similarity' YP_019146.1 'similar to SP:O05390, SP:P37134, GB:X62116, and PID:580779; identified by sequence similarity' YP_019147.1 'similar to SP:P37134, GB:X62116, and PID:580779; identified by sequence similarity' YP_019148.1 'similar to GP:16412832, and SP:P42414; identified by sequence similarity' YP_019149.1 similar to SP:P42412; identified by sequence similarity YP_019150.1 'similar to GP:15980566, and SP:P42415; identified by sequence similarity' YP_019153.1 'catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate' YP_019154.1 similar to SP:P42413; identified by sequence similarity YP_019161.1 'similar to GP:1565245, SP:P07105, GB:X05797, and PID:41406; identified by sequence similarity' YP_019162.2 similar to SP:P22705; identified by sequence similarity YP_019164.1 'similar to SP:P07126, GB:X06084, GB:X07013, and PID:43377; identified by sequence similarity' YP_019165.1 similar to GP:21685491; identified by sequence similarity YP_019166.1 similar to SP:Q9RMZ0; identified by sequence similarity YP_019169.1 'similar to SP:P36242, and PID:402165; identified by sequence similarity' YP_019170.1 'similar to GP:15023392, and GP:15023392; identified by sequence similarity' YP_019172.1 similar to GP:6759486; identified by sequence similarity YP_019173.1 similar to SP:P04028; identified by sequence similarity YP_019175.1 'similar to SP:P26288, PID:581748, SP:P26288, and PID:581748; identified by sequence similarity' YP_019176.1 identified by match to PFAM protein family HMM PF00070 YP_019177.1 identified by match to PFAM protein family HMM PF00581 YP_019178.1 similar to GP:16413208; identified by sequence similarity YP_019180.1 similar to GP:16413372; identified by sequence similarity YP_019181.1 similar to GP:16413373; identified by sequence similarity YP_019182.1 'similar to GP:16410328, and GP:16410328; identified by sequence similarity' YP_019184.1 'similar to SP:P36662, GB:X73888, PID:471306, GB:U00096, PID:1651490, PID:1651496, and PID:1787232; identified by sequence similarity' YP_019185.1 similar to SP:P45867; identified by sequence similarity YP_019186.1 'an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism' YP_019187.1 'composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism' YP_019188.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA YP_019189.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_019190.1 identified by match to TIGR protein family HMM TIGR00513 YP_019191.2 similar to SP:P27095; identified by sequence similarity YP_019193.1 identified by match to PFAM protein family HMM PF00583 YP_019194.1 identified by match to TIGR protein family HMM TIGR00176 YP_019195.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_019196.1 similar to GP:1934836; identified by sequence similarity YP_019197.1 identified by match to PFAM protein family HMM PF00768 YP_019198.1 'similar to GP:16411909, and GP:16411909; identified by sequence similarity' YP_019199.1 'similar to GP:16411910, and GP:16411910; identified by sequence similarity' YP_019200.1 identified by match to PFAM protein family HMM PF01966 YP_019201.1 similar to SP:P04028; identified by sequence similarity YP_019202.2 Enables the cleavage of the glycosidic bond in S-adenosylhomocysteine YP_019204.1 identified by match to PFAM protein family HMM PF00583 YP_019210.1 'similar to GP:16409775, and GP:16409775; identified by sequence similarity' YP_019211.1 similar to SP:O34863; identified by sequence similarity YP_019212.1 identified by match to PFAM protein family HMM PF03551 YP_019214.1 identified by match to PFAM protein family HMM PF04238 YP_019215.1 similar to GP:17129690; identified by sequence similarity YP_019216.1 identified by match to PFAM protein family HMM PF04117 YP_019217.1 identified by match to PFAM protein family HMM PF00293 YP_019220.1 'similar to SP:P37063, GB:X72001, and GB:X73296; identified by sequence similarity' YP_019221.1 identified by match to PFAM protein family HMM PF00165 YP_019222.1 'similar to SP:P37742, GB:L11721, SP:P24175, GB:M77127, PID:147165, PID:304879, PID:415624, GB:U00096, PID:1407617, PID:1736750, PID:1736754, and PID:1788361; identified by sequence similarity' YP_019225.2 'similar to GB:X05409, GB:K03001, GB:M26760, GB:M54931, GB:Y00109, GB:M20444, GB:M20445, GB:M20446, GB:M20447, GB:M20448, GB:M20449, GB:M20450, GB:M20451, GB:M20452, GB:M20453, GB:M20454, GB:M20455, GB:M20456, SP:P05091, PID:178390, PID:178396, PID:178398, GB:X05409, GB:K03001, GB:M26760, GB:M54931, GB:Y00109, GB:M20444, GB:M20445, GB:M20446, GB:M20447, GB:M20448, GB:M20449, GB:M20450, GB:M20451, GB:M20452, GB:M20453, GB:M20454, GB:M20455, GB:M20456, SP:P05091, PID:178390, PID:178396, and PID:178398; identified by sequence similarity' YP_019227.1 identified by match to PFAM protein family HMM PF03614 YP_019228.1 similar to GP:15024465; identified by sequence similarity YP_019229.1 similar to GP:17132884; identified by sequence similarity YP_019232.1 identified by match to PFAM protein family HMM PF03848 YP_019234.1 'similar to GB:M12886, GB:D13082, GB:D13087, GB:D13088, GB:L34740, GB:L09705, GB:M12510, GB:M12888, GB:X57603, GB:X57604, SP:P01850, PID:1100183, PID:1100191, PID:1552519, PID:2218048, PID:2218051, PID:23594, PID:338833, PID:338837, PID:338954, PID:339010, PID:407759, PID:553695, PID:553703, PID:673423, PID:758613, GB:M12886, GB:D13082, GB:D13087, GB:D13088, GB:L34740, GB:L09705, GB:M12510, GB:M12888, GB:X57603, GB:X57604, SP:P01850, PID:1100183, PID:1100191, PID:1552519, PID:2218048, PID:2218051, PID:23594, PID:338833, PID:338837, PID:338954, PID:339010, PID:407759, PID:553695, PID:553703, PID:673423, and PID:758613; identified by sequence similarity' YP_019235.1 identified by match to PFAM protein family HMM PF03069 YP_019236.1 'similar to SP:P42421, GB:M19364, SP:P07316, PID:181099, and PID:181118; identified by sequence similarity' YP_019239.1 similar to GP:15026409; identified by sequence similarity YP_019242.1 identified by match to PFAM protein family HMM PF00583 YP_019244.1 'similar to GB:M19364, SP:P07316, PID:181099, and PID:181118; identified by sequence similarity' YP_019250.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_019251.2 'similar to GP:15026752, and GP:15026752; identified by sequence similarity' YP_019252.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_019253.1 'similar to SP:P25052, GB:X54869, SP:P26717, and PID:35061; identified by sequence similarity' YP_019268.1 'similar to SP:P21622, and PID:47692; identified by sequence similarity' YP_019269.1 'similar to GP:2632224, and GP:15023315; identified by sequence similarity' YP_019270.1 similar to GP:3660657; identified by sequence similarity YP_019271.1 similar to GP:15026634; identified by sequence similarity YP_019272.1 identified by match to PFAM protein family HMM PF03551 YP_019273.1 'similar to SP:O08469, GB:X68194, GB:S72481, and PID:32474; identified by sequence similarity' YP_019275.1 identified by match to TIGR protein family HMM TIGR01681 YP_019277.2 'similar to SP:P22639, and PID:1088261; identified by sequence similarity' YP_019278.2 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_019279.1 identified by match to PFAM protein family HMM PF04101 YP_019280.1 identified by match to PFAM protein family HMM PF01177 YP_019281.1 'similar to GP:15625435, and GP:15625435; identified by sequence similarity' YP_019282.1 similar to GP:15625436; identified by sequence similarity YP_019283.2 similar to GP:14971956; identified by sequence similarity YP_019284.1 identified by match to TIGR protein family HMM TIGR01732 YP_019285.1 'similar to GB:X55885, SP:P24390, and PID:34031; identified by sequence similarity' YP_019286.2 identified by match to PFAM protein family HMM PF00069 YP_019287.1 similar to GP:16517139; identified by sequence similarity YP_019288.1 'similar to SP:P35646, GB:Z12609, and PID:41331; identified by sequence similarity' YP_019289.1 'similar to GB:X63563, SP:P30876, and PID:36122; identified by sequence similarity' YP_019290.2 similar to GP:15024451; identified by sequence similarity YP_019292.1 similar to GP:4894253; identified by sequence similarity YP_019293.1 'similar to GP:15023305, and GP:15023305; identified by sequence similarity' YP_019294.1 'similar to GP:16415194, and GP:16415194; identified by sequence similarity' YP_019295.1 'similar to GP:4584494, and GP:4584494; identified by sequence similarity' YP_019296.1 'similar to SP:Q05878, and PID:581756; identified by sequence similarity' YP_019297.2 'similar to SP:P08656, PID:459906, SP:P08656, and PID:459906; identified by sequence similarity' YP_019298.1 'similar to GB:M96233, GB:M96234, GB:M99421, GB:M99422, GB:X68677, GB:X56837, SP:P09488, SP:Q03013, PID:306817, PID:306819, PID:31937, GB:M96233, GB:M96234, GB:M99421, GB:M99422, GB:X68677, GB:X56837, SP:P09488, SP:Q03013, PID:306817, PID:306819, and PID:31937; identified by sequence similarity' YP_019301.1 'similar to GP:16266764, SP:P35109, GB:X63347, SP:P35106, SP:P35107, GB:X64957, GB:X64959, PID:414191, and PID:46348; identified by sequence similarity' YP_019303.2 identified by match to PFAM protein family HMM PF00376 YP_019304.1 'similar to GB:U04208, and PID:436947; identified by sequence similarity' YP_019307.1 identified by match to PFAM protein family HMM PF00583 YP_019308.1 identified by match to PFAM protein family HMM PF03009 YP_019310.1 'similar to GB:L22179, GB:Z69745, SP:Q03164, PID:347377, PID:553800, PID:899268, GB:L22179, GB:Z69745, SP:Q03164, PID:347377, PID:553800, and PID:899268; identified by sequence similarity' YP_019313.1 'similar to SP:P96680, SP:P25468, GB:X55636, and PID:47870; identified by sequence similarity' YP_019314.1 similar to GP:11862937; identified by sequence similarity YP_019317.1 similar to GP:15980171; identified by sequence similarity YP_019319.1 'similar to GB:M74387, GB:Z29373, GB:X59847, GB:X58775, GB:X58776, SP:P32004, PID:1302658, PID:29643, PID:347807, PID:35010, PID:472989, GB:M74387, GB:Z29373, GB:X59847, GB:X58775, GB:X58776, SP:P32004, PID:1302658, PID:29643, PID:347807, PID:35010, and PID:472989; identified by sequence similarity' YP_019321.1 similar to GP:1235993; identified by sequence similarity YP_019324.1 'similar to GP:15979347, and GP:15979347; identified by sequence similarity' YP_019325.1 binds the polymerase to DNA and acts as a sliding clamp YP_019326.1 'similar to GP:15022907, and GP:15022907; identified by sequence similarity' YP_019328.1 'similar to GB:M60398, SP:P25177, PID:149008, GB:AE000511, and PID:2313156; identified by sequence similarity' YP_019332.1 similar to GP:4154073; identified by sequence similarity YP_019333.1 'similar to SP:P23340, and SP:P23340; identified by sequence similarity' YP_019334.1 'similar to GP:18043212, and GP:18043212; identified by sequence similarity' YP_019335.2 identified by match to PFAM protein family HMM PF02922 YP_019337.1 'similar to SP:P42320, SP:P37315, PID:349227, PID:466681, GB:U00096, and PID:1789964; identified by sequence similarity' YP_019339.1 'similar to SP:P32982, and SP:P32982; identified by sequence similarity' YP_019340.1 identified by match to PFAM protein family HMM PF00583 YP_019341.1 'similar to SP:P21324, PID:145151, SP:P21324, and PID:145151; identified by sequence similarity' YP_019342.1 similar to GP:16411152; identified by sequence similarity YP_019343.1 'similar to GP:13940313, and GP:13940313; identified by sequence similarity' YP_019347.1 identified by match to PFAM protein family HMM PF01541 YP_019350.1 'similar to GP:10176989, and GP:10176989; identified by sequence similarity' YP_019352.1 'similar to GP:17134582, and GP:17134582; identified by sequence similarity' YP_019354.1 'similar to GP:15980065, and GP:15980065; identified by sequence similarity' YP_019355.1 'similar to SP:O32159, SP:P07779, GB:X06452, and PID:38742; identified by sequence similarity' YP_019356.1 'similar to GP:16410307, and GP:16410307; identified by sequence similarity' YP_019357.1 'similar to SP:P35029, GB:X59038, PID:47504, SP:P35029, GB:X59038, and PID:47504; identified by sequence similarity' YP_019360.3 identified by match to TIGR protein family HMM TIGR01668 YP_019365.1 identified by match to TIGR protein family HMM TIGR01753 YP_019368.1 similar to GP:6635397; identified by sequence similarity YP_019369.1 similar to GP:15393295; identified by sequence similarity YP_019370.1 'similar to SP:P05806, GB:Z22651, GB:L04696, GB:M63454, GB:L04695, GB:L11604, GB:L11666, GB:L19937, GB:L22027, GB:L32862, GB:M32319, GB:M33573, GB:M58636, GB:M75138, GB:M81798, GB:M84381, GB:M84385, GB:U03859, GB:U06862, GB:U11265, GB:U17107, GB:U30904, GB:X61708, GB:Z15143, GB:D50292, GB:D50293, GB:D50294, GB:D50299, GB:L36979, GB:M22786, GB:M22789, GB:M22793, GB:M22796, GB:M28109, GB:M28110, GB:M28111, GB:M28112, GB:M68964, GB:M86403, GB:X87268, GB:X83401, GB:U50710, GB:U49902, GB:U49898, GB:U49900, GB:X96533, GB:L75941, GB:L76094, GB:L75942, GB:L41925, GB:D44500, GB:U70529, GB:U59965, GB:U52173, GB:U52177, GB:U52167, GB:U52171, GB:U76392, GB:U76393, GB:U76390, GB:U76391, SP:P01889, SP:P10318, SP:P10319, SP:P10320, SP:P18463, SP:P19373, SP:P30464, SP:P30465, SP:P30466, SP:P30468, SP:P30469, SP:P30470, SP:P30471, SP:P30472, SP:P30473, SP:P30474, SP:P30477, SP:P30478, SP:P30479, SP:P30480, SP:P30481, SP:P30482, SP:P30483, SP:P30484, SP:P30485, SP:P30488, SP:P30489, SP:P30491, SP:P30492, SP:P30493, SP:P30494' YP_019371.1 similar to GP:21685483; identified by sequence similarity YP_019372.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis has been shown to regulate cell envelope modification and may effect antibiotic resistance YP_019373.1 'similar to GB:J00230, SP:P01857, SP:P01859, SP:P01860, SP:P01861, PID:1335110, PID:1335112, PID:1335113, PID:184758, PID:567112, and PID:577056; identified by sequence similarity' YP_019374.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_019376.1 similar to SP:P09185; identified by sequence similarity YP_019378.1 'similar to SP:P25468, GB:X55636, and PID:47870; identified by sequence similarity' YP_019379.1 'similar to GB:M18269, SP:P19401, GB:U11937, GB:U11939, GB:U20101, GB:U20102, GB:U20103, GB:U20104, GB:X66816, PID:1235807, PID:1235809, and PID:153544; identified by sequence similarity' YP_019381.2 identified by match to PFAM protein family HMM PF04020 YP_019382.1 similar to GP:15149826; identified by sequence similarity YP_019384.1 identified by match to PFAM protein family HMM PF00583 YP_019385.2 similar to GP:15025643; identified by sequence similarity YP_019386.1 'similar to SP:Q05489, PID:49206, PID:640960, and PID:1247764; identified by sequence similarity' YP_019387.1 'similar to GB:M63193, SP:P19971, PID:1399964, PID:189701, GB:M63193, SP:P19971, PID:1399964, and PID:189701; identified by sequence similarity' YP_019388.1 'similar to GB:M62866, SP:P29941, and PID:151158; identified by sequence similarity' YP_019390.1 'similar to SP:P33357, PID:405857, GB:U00096, and PID:1788446; identified by sequence similarity' YP_019391.1 'similar to GP:16414314, and GP:16414314; identified by sequence similarity' YP_019392.1 similar to GP:17427769; identified by sequence similarity YP_019393.1 'similar to GP:17427771, and GP:17427771; identified by sequence similarity' YP_019394.1 'similar to PIR:S59898, GB:L04569, GB:M57971, GB:Z34811, GB:Z34812, GB:Z34821, GB:Z34822, GB:Z34809, GB:Z34810, GB:Z34813, GB:Z34814, GB:Z34815, GB:Z34816, GB:Z34817, GB:Z34818, GB:Z34819, GB:Z34820, GB:M57972, GB:M91370, GB:Z26294, GB:Z26295, PID:291895, PID:501073, PID:508183, PID:508185, PID:508187, PID:508189, PID:508191, PID:508193, PID:508195, PID:508197, PID:508199, PID:508201, PID:509048, PID:509068, PID:509168, PID:509178, PID:509341, and PID:509344; identified by sequence similarity' YP_019395.1 'similar to GP:1770039, SP:P07324, and PID:40563; identified by sequence similarity' YP_019396.1 'similar to GB:M36860, GB:M16983, GB:M17265, GB:M17266, GB:M17267, GB:M17268, GB:M17271, GB:M17272, GB:M17273, GB:M17275, GB:M17276, GB:M17277, GB:M17278, GB:M17279, GB:M17281, GB:M17282, GB:M17270, GB:M17280, GB:M17274, GB:M24782, GB:X15603, GB:M26867, SP:P15502, PID:1432162, PID:182020, PID:182062, PID:182064, GB:M36860, GB:M16983, GB:M17265, GB:M17266, GB:M17267, GB:M17268, GB:M17271, GB:M17272, GB:M17273, GB:M17275, GB:M17276, GB:M17277, GB:M17278, GB:M17279, GB:M17281, GB:M17282, GB:M17270, GB:M17280, GB:M17274, GB:M24782, GB:X15603, GB:M26867, SP:P15502, PID:1432162, PID:182020, PID:182062, and PID:182064; identified by sequence similarity' YP_019398.1 'similar to GP:3298509, and GP:10173293; identified by sequence similarity' YP_019401.1 similar to GP:10174444; identified by sequence similarity YP_019404.1 identified by match to PFAM protein family HMM PF00583 YP_019405.1 'similar to GP:7799518, and GP:7799518; identified by sequence similarity' YP_019407.1 identified by match to PFAM protein family HMM PF03848 YP_019408.1 identified by match to TIGR protein family HMM TIGR01350 YP_019409.1 identified by match to PFAM protein family HMM PF01047 YP_019413.1 E3 component of acetoin cleaving system; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_019414.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA YP_019416.1 similar to SP:O34591; identified by sequence similarity YP_019417.1 'similar to GP:472326, SP:Q05373, and PID:49227; identified by sequence similarity' YP_019420.2 'similar to GB:X57351, GB:X02490, SP:Q01628, SP:Q01629, and PID:23396; identified by sequence similarity' YP_019421.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_019423.1 'similar to GP:17131105, GB:U12894, SP:P46005, and PID:531398; identified by sequence similarity' YP_019424.2 'similar to GP:13022166, SP:P35647, GB:Z12609, and PID:41332; identified by sequence similarity' YP_019427.1 'similar to GB:L08010, GB:D17291, GB:D16816, SP:P05451, SP:P48304, PID:474306, PID:474308, PID:487726, PID:623413, GB:L08010, GB:D17291, GB:D16816, SP:P05451, SP:P48304, PID:474306, PID:474308, PID:487726, and PID:623413; identified by sequence similarity' YP_019428.1 'similar to SP:P46920, GB:L08010, GB:D17291, GB:D16816, SP:P05451, SP:P48304, PID:474306, PID:474308, PID:487726, and PID:623413; identified by sequence similarity' YP_019429.1 'similar to GP:6119662, GB:L08010, GB:D17291, GB:D16816, SP:P05451, SP:P48304, PID:474306, PID:474308, PID:487726, and PID:623413; identified by sequence similarity' YP_019430.1 identified by match to PFAM protein family HMM PF00574 YP_019431.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_019432.1 'similar to SP:P25528, GB:L22659, SP:P46001, PID:437337, and PID:1381552; identified by sequence similarity' YP_019433.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway YP_019434.1 identified by match to PFAM protein family HMM PF00583 YP_019435.1 similar to GP:16411955; identified by sequence similarity YP_019436.1 'In Listeria monocytogenes this protein binds a specific sites on DNA, influencing the topology and transcription; regulates flaA, proU and ompC; is osmoregulated' YP_019439.1 'similar to SP:P13963, GB:X06242, PID:39329, SP:P13963, GB:X06242, and PID:39329; identified by sequence similarity' YP_019442.1 'similar to GP:17430118, and GP:17430118; identified by sequence similarity' YP_019443.1 'similar to GP:6714749, and GP:6714749; identified by sequence similarity' YP_019444.1 'similar to GB:X68148, SP:P29353, PID:1834515, PID:1899055, and PID:36454; identified by sequence similarity' YP_019445.1 'similar to GP:16409640, and GP:7716573; identified by sequence similarity' YP_019446.1 'similar to GP:15023134, and GP:15023134; identified by sequence similarity' YP_019447.1 'similar to GP:1865711, and GP:1865711; identified by sequence similarity' YP_019448.2 similar to GP:14588843; identified by sequence similarity YP_019454.1 identified by match to PFAM protein family HMM PF03551 YP_019455.1 'similar to GP:17130362, GB:J03427, and PID:150828; identified by sequence similarity' YP_019456.1 'similar to GP:15023937, and GP:15023937; identified by sequence similarity' YP_019457.1 identified by match to PFAM protein family HMM PF02517 YP_052628.2 'similar to GB:L27596, SP:P42020, and PID:495046; identified by sequence similarity' YP_019460.1 'similar to GP:11191974, and GP:11191974; identified by sequence similarity' YP_019461.1 similar to SP:P40724; identified by sequence similarity YP_019465.1 'similar to SP:Q05373, PID:49227, SP:Q05373, and PID:49227; identified by sequence similarity' YP_019467.1 'similar to SP:P37742, GB:L11721, SP:P24175, GB:M77127, PID:147165, PID:304879, PID:415624, GB:U00096, PID:1407617, PID:1736750, PID:1736754, and PID:1788361; identified by sequence similarity' YP_019468.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_019469.1 similar to GP:3308998; identified by sequence similarity YP_019470.1 similar to GP:17738575; identified by sequence similarity YP_019471.2 identified by match to TIGR protein family HMM TIGR00778 YP_019472.1 similar to SP:P19663; identified by sequence similarity YP_019473.1 'similar to GP:13309884, SP:P13954, GB:Y07536, PID:46552, and PID:46749; identified by sequence similarity' YP_019474.1 similar to SP:Q04796; identified by sequence similarity YP_019476.1 similar to GP:6900003; identified by sequence similarity YP_019477.1 similar to GP:13940328; identified by sequence similarity YP_019478.1 identified by match to PFAM protein family HMM PF02796 YP_019482.1 'similar to GB:M36860, GB:M16983, GB:M17265, GB:M17266, GB:M17267, GB:M17268, GB:M17271, GB:M17272, GB:M17273, GB:M17275, GB:M17276, GB:M17277, GB:M17278, GB:M17279, GB:M17281, GB:M17282, GB:M17270, GB:M17280, GB:M17274, GB:M24782, GB:X15603, GB:M26867, SP:P15502, PID:1432162, PID:182020, PID:182062, PID:182064, GB:M36860, GB:M16983, GB:M17265, GB:M17266, GB:M17267, GB:M17268, GB:M17271, GB:M17272, GB:M17273, GB:M17275, GB:M17276, GB:M17277, GB:M17278, GB:M17279, GB:M17281, GB:M17282, GB:M17270, GB:M17280, GB:M17274, GB:M24782, GB:X15603, GB:M26867, SP:P15502, PID:1432162, PID:182020, PID:182062, PID:182064, GB:M36860, GB:M16983, GB:M17265, GB:M17266, GB:M17267, GB:M17268, GB:M17271, GB:M17272, GB:M17273, GB:M17275, GB:M17276, GB:M17277, GB:M17278, GB:M17279, GB:M17281, GB:M17282, GB:M17270, GB:M17280, GB:M17274, GB:M24782, GB:X15603, GB:M26867, SP:P15502, PID:1432162, PID:182020, PID:182062, PID:182064, GB:M36860, GB:M16983, GB:M17265, GB:M17266, GB:M17267, GB:M17268, GB:M17271, GB:M17272, GB:M17273, GB:M172' YP_019484.1 'similar to SP:Q05174, and SP:Q05174; identified by sequence similarity' YP_019485.1 identified by match to PFAM protein family HMM PF00597 YP_019488.1 'similar to GB:D00726, SP:P22830, PID:219656, GB:D00726, SP:P22830, and PID:219656; identified by sequence similarity' YP_019489.1 similar to GP:17135590; identified by sequence similarity YP_019490.1 'similar to GP:10717143, GP:10717143, and GP:10717143; identified by sequence similarity' YP_019491.1 'similar to SP:P33647, GB:D16451, PID:506196, PID:537067, GB:U00096, and PID:1790672; identified by sequence similarity' YP_019492.1 similar to GP:10175628; identified by sequence similarity YP_019495.1 similar to GP:16412678; identified by sequence similarity YP_019497.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis YP_019501.1 'similar to GB:X60313, PID:45529, GB:X59739, GB:X59738, GB:X59740, SP:P08048, SP:P17010, PID:340434, PID:38020, PID:38022, and PID:38024; identified by sequence similarity' YP_019503.1 catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue YP_019505.1 'similar to GP:15025450, and GP:15025450; identified by sequence similarity' YP_019509.1 'similar to GP:15026081, and GP:15026081; identified by sequence similarity' YP_019510.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine YP_019511.1 identified by match to PFAM protein family HMM PF01636 YP_019512.1 similar to GP:8247359; identified by sequence similarity YP_019516.1 'similar to SP:P08063, PID:154718, and PID:154801; identified by sequence similarity' YP_019517.1 identified by match to PFAM protein family HMM PF00583 YP_019521.1 'similar to GP:1856977, and GP:1856977; identified by sequence similarity' YP_019522.1 'similar to SP:P39133, and SP:P39133; identified by sequence similarity' YP_019523.1 'similar to GP:1381682, GB:K03460, SP:P04687, PID:306451, and PID:340017; identified by sequence similarity' YP_019524.1 'similar to GP:1381682, and GP:14994353; identified by sequence similarity' YP_019525.1 'similar to SP:P30197, GB:X62386, and PID:46970; identified by sequence similarity' YP_019526.1 'similar to SP:P30197, GB:X62386, and PID:46970; identified by sequence similarity' YP_019530.1 identified by match to PFAM protein family HMM PF04226 YP_019531.1 similar to GP:4584100; identified by sequence similarity YP_019533.1 identified by match to PFAM protein family HMM PF01135 YP_019539.1 'similar to GB:L28041, GB:X85789, PID:407374, PID:476745, and PID:757815; identified by sequence similarity' YP_019541.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_019542.1 'similar to SP:P21774, SP:P08449, and PID:48017; identified by sequence similarity' YP_019543.1 catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A YP_019544.1 identified by match to PFAM protein family HMM PF02517 YP_019546.2 identified by match to PFAM protein family HMM PF04171 YP_019553.1 similar to SP:P17337; identified by sequence similarity YP_019554.1 similar to SP:P17337; identified by sequence similarity YP_019555.1 'similar to SP:P17337, and SP:P17337; identified by sequence similarity' YP_019556.1 'similar to SP:P17337, and SP:P17337; identified by sequence similarity' YP_019557.1 'similar to SP:P17337, and SP:P17337; identified by sequence similarity' YP_019558.1 identified by match to PFAM protein family HMM PF04276 YP_019561.1 catalyzes the release of sulfite from alkanesulfonates YP_019562.1 'similar to SP:P75851, GB:K00558, GB:S62639, SP:P04687, SP:P05215, PID:340019, PID:340021, and PID:37492; identified by sequence similarity' YP_019563.1 'similar to SP:P40400, GB:Z11559, GB:M58510, SP:P21399, PID:33963, and PID:896473; identified by sequence similarity' YP_019564.1 identified by match to TIGR protein family HMM TIGR01193 YP_019566.1 identified by match to PFAM protein family HMM PF00440 YP_019567.1 identified by match to PFAM protein family HMM PF04167 YP_019568.1 identified by match to TIGR protein family HMM TIGR00586 YP_019570.1 identified by match to PFAM protein family HMM PF00515 YP_019571.1 similar to GP:12723463; identified by sequence similarity YP_019572.1 'similar to SP:Q00461, GB:M85289, GB:S76436, SP:P98160, PID:184427, and PID:29470; identified by sequence similarity' YP_019573.1 'similar to GB:M29064, GB:U09120, GB:U09121, GB:U09122, GB:U09123, GB:D28877, SP:P22626, PID:337449, PID:337453, PID:500638, PID:565643, and PID:565644; identified by sequence similarity' YP_019574.3 identified by match to PFAM protein family HMM PF02787 YP_019576.1 identified by match to PFAM protein family HMM PF00583 YP_019577.1 'similar to SP:P23134, and PID:46385; identified by sequence similarity' YP_019579.1 similar to GP:13752435; identified by sequence similarity YP_019580.1 identified by match to PFAM protein family HMM PF00583 YP_019581.1 similar to GP:4726004; identified by sequence similarity YP_019582.1 'similar to GP:17222270, and GP:17222270; identified by sequence similarity' YP_019585.1 'similar to SP:Q04730, and PID:142946; identified by sequence similarity' YP_019587.1 similar to GP:17427961; identified by sequence similarity YP_019588.1 'similar to GP:16413375, and GP:16413375; identified by sequence similarity' YP_019589.1 'similar to SP:P33159, GB:X68014, and PID:40807; identified by sequence similarity' YP_019594.1 similar to SP:P17337; identified by sequence similarity YP_019595.1 identified by match to PFAM protein family HMM PF00583 YP_019596.2 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_022623.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_052629.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_019600.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_019601.1 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate YP_019605.1 similar to GP:15026556; identified by sequence similarity YP_019606.1 'similar to GB:L04656, SP:P35219, and PID:179938; identified by sequence similarity' YP_019609.1 'similar to SP:P16574, GB:X58355, PID:39353, SP:P16574, GB:X58355, and PID:39353; identified by sequence similarity' YP_019612.2 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_019613.1 similar to GP:16517120; identified by sequence similarity YP_019615.1 'similar to GB:M91593, SP:Q01445, and PID:150211; identified by sequence similarity' YP_019616.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_019618.1 'similar to GP:16504663, and SP:P36948; identified by sequence similarity' YP_019619.1 similar to GP:16504664; identified by sequence similarity YP_019620.2 'similar to SP:P31496, and PID:1016361; identified by sequence similarity' YP_022625.1 similar to SP:P39140; identified by sequence similarity YP_019624.1 similar to SP:P16558; identified by sequence similarity YP_019625.1 identified by match to PFAM protein family HMM PF01791 YP_019626.1 similar to GP:7635982; identified by sequence similarity YP_019629.1 identified by match to PFAM protein family HMM PF03032 YP_019630.1 'similar to SP:P27369, and PID:154510; identified by sequence similarity' YP_019631.1 identified by match to TIGR protein family HMM TIGR01770 YP_019632.1 identified by match to PFAM protein family HMM PF02796 YP_019634.1 'similar to GB:M14059, GB:M15801, GB:M10905, GB:X02761, GB:M14060, GB:A14133, GB:X04530, GB:K00055, GB:K00799, GB:M27589, GB:M12549, SP:P02751, PID:182704, PID:553295, GB:X54150, SP:P24071, PID:1054737, and PID:31330; identified by sequence similarity' YP_019635.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_019636.2 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_019638.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate YP_019639.1 'similar to SP:P39635, GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_019640.1 'similar to GP:1032474, and GP:1032474; identified by sequence similarity' YP_019641.2 'similar to GB:M77349, SP:Q15582, PID:339568, GB:M77349, SP:Q15582, and PID:339568; identified by sequence similarity' YP_019642.1 'similar to GP:6002200, and GP:6002200; identified by sequence similarity' YP_019643.1 'similar to SP:P30528, PID:581837, and PID:1542956; identified by sequence similarity' YP_019644.1 'similar to GP:9965580, and SP:P19405; identified by sequence similarity' YP_019645.1 'similar to SP:P08656, PID:459906, SP:P08656, and PID:459906; identified by sequence similarity' YP_019646.1 'similar to SP:P08656, and PID:459906; identified by sequence similarity' YP_019647.1 similar to GP:22776668; identified by sequence similarity YP_019649.1 'similar to SP:P80046, and PID:1478267; identified by sequence similarity' YP_019651.1 similar to GP:2564259; identified by sequence similarity YP_019652.1 'similar to GP:2564260, and GP:2564260; identified by sequence similarity' YP_019653.1 Phosphoprylates nucleosides or dinucleosides to make UMP or CMP as part of the pyrimidine salvage pathway YP_019654.1 'similar to SP:P23313, SP:P01553, SP:P34071, GB:L13374, GB:L13375, GB:L13376, GB:L13377, GB:L13378, GB:X51661, PID:295141, PID:295143, PID:295149, and PID:46571; identified by sequence similarity' YP_019655.1 identified by match to TIGR protein family HMM TIGR00068 YP_019656.1 'similar to GP:16410630, and GP:16413636; identified by sequence similarity' YP_019657.1 'similar to GP:16413635, and GP:16413635; identified by sequence similarity' YP_019658.1 'similar to GP:16409831, and GP:16409831; identified by sequence similarity' YP_019659.1 'similar to GB:M29153, and PID:147831; identified by sequence similarity' YP_052630.1 identified by match to PFAM protein family HMM PF03203 YP_019662.1 identified by match to PFAM protein family HMM PF00535 YP_019665.1 identified by match to PFAM protein family HMM PF00535 YP_019668.1 'similar to SP:P77581, GB:M55263, SP:P22322, PID:143022, PID:403481, PID:1303801, and GB:AL009126; identified by sequence similarity' YP_019669.1 identified by match to PFAM protein family HMM PF00199 YP_019671.1 'similar to SP:P26945, GB:X57853, and PID:580700; identified by sequence similarity' YP_019672.1 identified by match to TIGR protein family HMM TIGR01178 YP_019673.2 'similar to GP:4127525, and GP:16266764; identified by sequence similarity' YP_019678.1 similar to GP:1496004; identified by sequence similarity YP_019679.1 identified by match to PFAM protein family HMM PF00158 YP_019680.1 'similar to SP:P28816, GB:J01830, PID:154849, SP:P28816, GB:J01830, and PID:154849; identified by sequence similarity' YP_019681.1 'similar to SP:P32731, GB:Z18631, PID:580902, and GB:AL009126; identified by sequence similarity' YP_019682.1 'similar to GP:1881373, and SP:P00212; identified by sequence similarity' YP_019683.1 similar to SP:Q46306; identified by sequence similarity YP_019684.1 'similar to GP:15022846, and GP:15022846; identified by sequence similarity' YP_019685.1 'similar to GP:17742142, and GP:17742142; identified by sequence similarity' YP_019688.1 identified by match to PFAM protein family HMM PF03379 YP_019689.1 identified by match to TIGR protein family HMM TIGR01187 YP_019690.1 identified by match to PFAM protein family HMM PF00392 YP_019692.1 'similar to GP:7799239, and GP:7339623; identified by sequence similarity' YP_019693.1 identified by match to TIGR protein family HMM TIGR01193 YP_019694.1 identified by match to PFAM protein family HMM PF03334 YP_019695.1 identified by match to PFAM protein family HMM PF02687 YP_019697.1 'similar to GP:16414314, and GP:16414314; identified by sequence similarity' YP_019698.1 similar to GP:16414316; identified by sequence similarity YP_019699.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_019701.1 identified by match to PFAM protein family HMM PF00293 YP_019702.1 similar to SP:P37511; identified by sequence similarity YP_019703.1 'similar to GP:16411570, and GP:16411570; identified by sequence similarity' YP_019704.1 identified by match to PFAM protein family HMM PF02639 YP_019705.1 'similar to SP:P07883, PID:581613, SP:P07883, and PID:581613; identified by sequence similarity' YP_019706.2 identified by match to PFAM protein family HMM PF02893 YP_019707.1 similar to GP:3599624; identified by sequence similarity YP_019708.1 similar to SP:P31861; identified by sequence similarity YP_019709.2 'similar to SP:P31861, and SP:P31861; identified by sequence similarity' YP_019710.1 'similar to GP:16410723, and GP:16410723; identified by sequence similarity' YP_019711.1 phosphorylates nucleosides or dinucleosides to make UMP or CMP as part of the pyrimidine salvage pathway YP_019712.1 'similar to GB:M23173, SP:P20586, PID:151506, PID:444028, GB:M23173, SP:P20586, PID:151506, and PID:444028; identified by sequence similarity' YP_019713.1 'similar to GP:16411554, and GP:16411554; identified by sequence similarity' YP_019715.2 'similar to SP:P37717, GB:X54676, and PID:39288; identified by sequence similarity' YP_019716.1 similar to GP:15026511; identified by sequence similarity YP_019717.1 'similar to GP:16413242, and SP:P25737; identified by sequence similarity' YP_019718.2 similar to GP:10174894; identified by sequence similarity YP_019719.1 'similar to GP:4584144, and GP:4584144; identified by sequence similarity' YP_019720.1 'similar to GB:M14265, GB:X07192, SP:P01733, PID:2218041, PID:2275572, PID:296674, PID:338878, PID:36750, PID:467923, PID:553694, PID:565034, PID:619632, GB:M14265, GB:X07192, SP:P01733, PID:2218041, PID:2275572, PID:296674, PID:338878, PID:36750, PID:467923, PID:553694, PID:565034, and PID:619632; identified by sequence similarity' YP_019726.1 'similar to GB:U09881, and PID:497332; identified by sequence similarity' YP_019727.1 'similar to SP:P71013, GB:D90427, GB:D14034, GB:M76707, GB:X69953, SP:P25311, PID:220151, PID:340442, PID:38026, PID:456586, and PID:467671; identified by sequence similarity' YP_052631.2 Modulates the activities of several enzymes which are inactive in their acetylated form YP_052632.1 catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline YP_019735.1 similar to GP:17429186; identified by sequence similarity YP_019736.2 similar to GP:15980679; identified by sequence similarity YP_019737.1 identified by match to PFAM protein family HMM PF03746 YP_019738.1 identified by match to TIGR protein family HMM TIGR00724 YP_019739.1 'similar to GP:19713915, and GP:19713915; identified by sequence similarity' YP_019740.1 'similar to GP:1032474, and GP:1032474; identified by sequence similarity' YP_019741.1 'similar to SP:P42959, GB:L22647, SP:P34995, and PID:410209; identified by sequence similarity' YP_019742.1 'similar to GP:16410420, and SP:P46719; identified by sequence similarity' YP_019743.1 'similar to GP:3724051, GB:X02344, SP:P04350, SP:P05217, SP:P07437, PID:37494, PID:496887, and PID:897763; identified by sequence similarity' YP_019744.1 'similar to SP:P25468, GB:X55636, and PID:47870; identified by sequence similarity' YP_019746.1 'similar to SP:P18780, PID:1088257, GB:U07447, SP:P01621, SP:P01623, SP:P06311, SP:P18136, PID:470430, PID:470554, PID:470562, PID:470568, PID:470576, PID:470578, PID:470580, PID:470584, PID:470586, PID:470598, PID:470618, PID:511004, PID:553478, PID:560766, PID:561703, PID:587346, PID:587352, PID:619431, PID:619433, PID:619617, PID:619618, PID:619761, PID:619762, PID:619767, PID:619768, PID:619769, PID:681900, PID:695533, PID:695536, PID:722418, PID:722424, PID:722462, PID:722476, PID:722494, PID:722500, PID:722518, PID:722522, PID:722536, PID:722580, PID:722582, PID:722584, PID:722596, PID:732740, PID:860992, and PID:860998; identified by sequence similarity' YP_019747.1 'similar to GP:17130906, and GP:17130906; identified by sequence similarity' YP_019748.1 similar to GP:2897873; identified by sequence similarity YP_019750.1 identified by match to PFAM protein family HMM PF04291 YP_019751.1 identified by match to PFAM protein family HMM PF01636 YP_019752.1 'similar to SP:P27712, GB:M62504, and PID:551983; identified by sequence similarity' YP_019753.2 'similar to SP:P32700, PID:409801, GB:U00096, PID:1790495, SP:P32700, PID:409801, GB:U00096, and PID:1790495; identified by sequence similarity' YP_019754.1 identified by match to PFAM protein family HMM PF03239 YP_019755.2 identified by match to PFAM protein family HMM PF00440 YP_019756.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_019757.1 similar to GP:15025845; identified by sequence similarity YP_019760.1 'similar to GB:M85289, GB:S76436, SP:P98160, PID:184427, and PID:29470; identified by sequence similarity' YP_019762.1 'similar to GB:L09706, GB:L09707, GB:L09708, GB:X04481, GB:M15549, SP:P06681, PID:187765, PID:2347131, PID:298124, PID:34628, PID:467309, PID:553209, GB:L09706, GB:L09707, GB:L09708, GB:X04481, GB:M15549, SP:P06681, PID:187765, PID:2347131, PID:298124, PID:34628, PID:467309, and PID:553209; identified by sequence similarity' YP_019763.1 identified by match to PFAM protein family HMM PF04171 YP_019767.1 'similar to GB:X52104, GB:X15729, SP:P17844, PID:35220, and PID:38318; identified by sequence similarity' YP_019770.1 'similar to GB:X52104, GB:X15729, SP:P17844, PID:35220, and PID:38318; identified by sequence similarity' YP_019771.1 similar to GP:1934622; identified by sequence similarity YP_019773.1 similar to GP:4519429; identified by sequence similarity YP_052633.1 catalyzes the formation of fumarate from aspartate YP_019776.1 identified by match to TIGR protein family HMM TIGR01734 YP_019777.1 'similar to SP:Q07683, GB:M25532, SP:P16562, PID:1262817, and PID:339883; identified by sequence similarity' YP_019779.1 'similar to GP:6759464, and GP:6759464; identified by sequence similarity' YP_019780.2 similar to GP:6759463; identified by sequence similarity YP_019781.1 'similar to SP:P13954, GB:Y07536, PID:46552, and PID:46749; identified by sequence similarity' YP_019782.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate YP_019783.1 'similar to SP:P10245, and SP:P10245; identified by sequence similarity' YP_019784.1 'similar to SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, and PID:1314251; identified by sequence similarity' YP_019790.1 'similar to SP:P10488, and PID:43786; identified by sequence similarity'; 'similar to GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_022633.1 'similar to GB:L29059, SP:P38583, PID:456412, GB:M91029, SP:Q01433, PID:178547, PID:608493, PID:608495, PID:608497, PID:608499, PID:608503, PID:608504, PID:608505, and PID:644509; identified by sequence similarity' YP_019795.1 catalyzes the formation of glutamate from glutamine YP_019798.2 similar to GP:12724801; identified by sequence similarity YP_019799.1 similar to GP:13815657; identified by sequence similarity YP_019800.1 'similar to GP:16410680, and GP:16410680; identified by sequence similarity' YP_019803.1 'similar to GB:M14753, GB:X16416, GB:U07561, GB:U07563, GB:M14752, GB:M14754, GB:M30833, GB:S69223, SP:P00519, PID:179746, PID:179750, PID:514267, PID:514268, PID:553164, and PID:560759; identified by sequence similarity' YP_019804.1 identified by match to PFAM protein family HMM PF00199 YP_019805.1 'similar to SP:P29715, GB:L39060, and PID:695801; identified by sequence similarity' YP_019806.1 identified by match to PFAM protein family HMM PF00857 YP_019807.1 similar to GP:17427251; identified by sequence similarity YP_019808.1 'similar to GP:17129695, GB:Z23013, SP:Q08815, and PID:396549; identified by sequence similarity' YP_019810.2 similar to SP:P27111; identified by sequence similarity YP_019814.1 similar to GP:3676423; identified by sequence similarity YP_019815.2 similar to GP:4584098; identified by sequence similarity YP_019816.1 'similar to SP:P18183, GB:X52983, PID:48745, SP:P18183, GB:X52983, and PID:48745; identified by sequence similarity' YP_019817.1 'similar to GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, and PID:691763; identified by sequence similarity' YP_019818.1 'similar to GP:16414019, and GP:16414019; identified by sequence similarity' YP_019819.1 'similar to SP:P20628, and PID:142038; identified by sequence similarity' YP_019820.1 'similar to GP:17739623, and GP:17739623; identified by sequence similarity' YP_019822.1 'similar to SP:P21590, GB:U00007, GB:X55791, PID:405896, PID:42017, GB:U00096, PID:1788431, SP:P21590, GB:U00007, GB:X55791, PID:405896, PID:42017, GB:U00096, and PID:1788431; identified by sequence similarity' YP_019823.1 'similar to SP:P21590, GB:U00007, GB:X55791, PID:405896, PID:42017, GB:U00096, and PID:1788431; identified by sequence similarity' YP_019824.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_019825.1 'similar to SP:P21590, GB:U00007, GB:X55791, PID:405896, PID:42017, GB:U00096, PID:1788431, SP:P21590, GB:U00007, GB:X55791, PID:405896, PID:42017, GB:U00096, and PID:1788431; identified by sequence similarity' YP_019826.1 similar to GP:732998; identified by sequence similarity YP_019827.1 'catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate' YP_019828.1 identified by match to PFAM protein family HMM PF03066 YP_019830.1 similar to GP:16414462; identified by sequence similarity YP_019831.1 'similar to GP:16411302, and GP:16411302; identified by sequence similarity' YP_019832.1 identified by match to TIGR protein family HMM TIGR01187 YP_019833.1 identified by match to TIGR protein family HMM TIGR01383 YP_019836.1 identified by match to PFAM protein family HMM PF00583 YP_019837.1 'catalyzes the reduction of arsenate to arsenite; also can dephosphorylate tyrosine phosphorylated proteins, aryl phosphates, and acyl phosphates' YP_019838.1 identified by match to PFAM protein family HMM PF03073 YP_019839.1 'similar to GB:L09706, GB:L09707, GB:L09708, GB:X04481, GB:M15549, SP:P06681, PID:187765, PID:2347131, PID:298124, PID:34628, PID:467309, and PID:553209; identified by sequence similarity' YP_019840.1 'similar to GB:L09706, GB:L09707, GB:L09708, GB:X04481, GB:M15549, SP:P06681, PID:187765, PID:2347131, PID:298124, PID:34628, PID:467309, and PID:553209; identified by sequence similarity' YP_019842.1 'similar to SP:P26503, GB:X58126, PID:1143533, and PID:581518; identified by sequence similarity' YP_019843.1 'similar to GP:17430991, and SP:P77319; identified by sequence similarity' YP_019845.2 similar to GP:6273669; identified by sequence similarity YP_019846.1 similar to GP:17429338; identified by sequence similarity YP_019847.1 identified by match to PFAM protein family HMM PF01546 YP_019848.1 similar to GP:15027927; identified by sequence similarity YP_019849.1 'similar to GB:M15856, GB:M76722, GB:X54516, SP:P06858, PID:307138, PID:34383, PID:34405, and PID:553523; identified by sequence similarity' YP_019851.1 similar to GP:4894251; identified by sequence similarity YP_019853.1 'similar to GP:984560, SP:P14034, and PID:44759; identified by sequence similarity' YP_019854.1 'similar to GP:16266766, and GP:16266766; identified by sequence similarity' YP_019857.1 'similar to GP:15978719, and GP:15978719; identified by sequence similarity' YP_019858.1 'similar to SP:P10245, and SP:P10245; identified by sequence similarity' YP_019859.1 'similar to GP:17430163, and GP:17430163; identified by sequence similarity' YP_019860.1 'Includes cytochrome P450 102 (EC 144) and NADPH-cytochrome P450 reductase (EC 1.6.4); similar to SP:P01077, and PID:217028; identified by sequence similarity' YP_019862.1 'similar to GB:L11931, GB:L23928, SP:P34896, PID:438634, GB:L11931, GB:L23928, SP:P34896, and PID:438634; identified by sequence similarity' YP_019865.1 'similar to SP:P33370, PID:405870, GB:U00096, PID:1788461, SP:P33370, PID:405870, GB:U00096, and PID:1788461; identified by sequence similarity' YP_019867.1 'similar to GB:U07559, GB:S70721, SP:P20663, and PID:533419; identified by sequence similarity' YP_019868.1 'similar to GP:17431126, and GP:17431126; identified by sequence similarity' YP_019869.1 similar to GP:17130539; identified by sequence similarity YP_019871.1 'similar to GP:15023630, and GP:15023630; identified by sequence similarity' YP_019872.2 similar to GP:15022875; identified by sequence similarity YP_019875.1 catalyzes the formation of pyruvate from D-cysteine YP_019882.1 identified by match to PFAM protein family HMM PF04218 YP_019884.1 'similar to GP:15979994, and GP:15979994; identified by sequence similarity' YP_019885.1 'similar to GB:U00010, PID:466791, GB:U00010, and PID:466791; identified by sequence similarity' YP_019886.1 identified by match to TIGR protein family HMM TIGR01746 YP_019888.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_019889.1 'similar to SP:P38119, PID:466983, SP:P38119, and PID:466983; identified by sequence similarity' YP_019891.1 similar to GP:13936996; identified by sequence similarity YP_019892.1 'similar to GP:16415261, and GP:16415261; identified by sequence similarity' YP_019893.1 'similar to GP:16415262, and GP:16415262; identified by sequence similarity' YP_019894.1 identified by match to PFAM protein family HMM PF03551 YP_019895.1 similar to GP:15023315; identified by sequence similarity YP_019896.1 'similar to GP:16412070, and GP:16412070; identified by sequence similarity' YP_019897.1 'similar to GP:16415264, and GP:16415264; identified by sequence similarity' YP_019899.1 identified by match to PFAM protein family HMM PF03011 YP_019902.1 similar to GP:143285; identified by sequence similarity YP_019903.1 'similar to SP:P31861, and SP:P31861; identified by sequence similarity' YP_019904.1 similar to GP:17981979; identified by sequence similarity YP_019905.1 identified by match to PFAM protein family HMM PF02589 YP_019906.1 identified by match to TIGR protein family HMM TIGR00384 YP_019907.1 'similar to SP:P00212, and SP:P00212; identified by sequence similarity' YP_019908.2 'similar to SP:P20668, and SP:P07642; identified by sequence similarity' YP_019909.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_019910.2 'similar to GP:10798673, and GP:10798673; identified by sequence similarity' YP_019914.1 'similar to SP:P31973, and PID:154536; identified by sequence similarity' YP_019915.1 'similar to SP:P31973, and PID:154536; identified by sequence similarity' YP_019916.1 'similar to SP:P30197, GB:X62386, PID:46970, SP:P30197, GB:X62386, and PID:46970; identified by sequence similarity' YP_019919.1 'similar to GP:2226185, SP:P30197, GB:X62386, and PID:46970; identified by sequence similarity' YP_019920.2 'similar to GP:1565245, SP:P17543, SP:P42189, PID:42265, and PID:42297; identified by sequence similarity' YP_019922.1 'similar to GP:15072471, and GP:15072471; identified by sequence similarity' YP_019924.1 similar to GP:6470220; identified by sequence similarity YP_019925.1 similar to GP:6470221; identified by sequence similarity YP_019927.1 'similar to PIR:A54078, GB:D90084, GB:J03575, GB:L13318, GB:M24848, GB:X52709, GB:X52710, GB:J03503, GB:M29155, GB:M29156, GB:M29157, GB:M29158, GB:M29159, GB:M29160, GB:M29161, GB:M29162, GB:M29163, GB:M29164, GB:M27257, SP:P08559, PID:1763350, PID:1763352, PID:1763354, PID:1763356, PID:1763358, PID:1763360, PID:189738, PID:190762, PID:219982, PID:292413, PID:35379, PID:35381, PID:387009, and PID:387011; identified by sequence similarity' YP_019929.1 'similar to SP:P12983, and PID:48332; identified by sequence similarity' YP_019930.2 similar to SP:P39909; identified by sequence similarity YP_019931.1 'similar to SP:P37022, and PID:1786322; identified by sequence similarity' YP_019933.1 'similar to SP:P43153, GB:D00306, GB:M18693, GB:M18694, GB:M18695, GB:M18696, GB:M18697, GB:M18698, GB:M18699, GB:M18700, GB:M16630, SP:P09093, SP:P11423, PID:182033, and PID:220014; identified by sequence similarity' YP_019934.1 'similar to GB:L03378, GB:X63759, GB:X63758, SP:Q05952, PID:292828, PID:505390, PID:505392, PID:642461, and PID:886878; identified by sequence similarity' YP_019936.1 'similar to SP:P05021, GB:X02826, PID:42609, GB:U00096, PID:1651460, and PID:1787177; identified by sequence similarity' YP_019937.1 similar to GP:1881339; identified by sequence similarity YP_019939.1 'similar to SP:O31178, and SP:O31178; identified by sequence similarity' YP_019940.1 similar to GP:15979371; identified by sequence similarity YP_019942.1 identified by match to PFAM protein family HMM PF03313 YP_019943.1 identified by match to PFAM protein family HMM PF03315 YP_019946.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde YP_019947.1 identified by match to PFAM protein family HMM PF02838 YP_019948.1 'The gene assignment is based in part on its proximity to the hypF gene.; similar to GP:12232077, and SP:P42034; identified by sequence similarity' YP_019949.1 identified by match to PFAM protein family HMM PF00857 YP_019950.1 similar to SP:P96582; identified by sequence similarity YP_019951.2 'similar to SP:P14034, and PID:44759; identified by sequence similarity' YP_019953.1 'similar to GP:16412323, and GP:16412323; identified by sequence similarity' YP_019954.1 identified by match to PFAM protein family HMM PF02826 YP_019955.3 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_019956.1 similar to GP:13676641; identified by sequence similarity YP_019957.1 'similar to SP:P80259, and SP:P80259; identified by sequence similarity' YP_019958.1 'Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis this protein is activated in response to cell wall antibiotics, ethanol, heat, acid, and superoxide stress' YP_019959.1 identified by match to PFAM protein family HMM PF04070 YP_019960.2 'similar to GP:15025437, and GP:15025437; identified by sequence similarity' YP_019961.3 The sequence for this gene has been reexamined and it appears as though the start codon for ORF04540 is an 'atc' isoleucine codon.; identified by Glimmer2 YP_019962.2 identified by match to PFAM protein family HMM PF00165 YP_019964.1 similar to GP:17133058; identified by sequence similarity YP_019965.1 identified by match to PFAM protein family HMM PF04271 YP_019972.1 similar to GP:4894270; identified by sequence similarity YP_052635.1 identified by match to PFAM protein family HMM PF00903 YP_019974.1 'similar to GP:15980477, and GP:15980477; identified by sequence similarity' YP_019976.1 similar to SP:P15555; identified by sequence similarity YP_019977.1 identified by match to PFAM protein family HMM PF03096 YP_019978.1 identified by match to PFAM protein family HMM PF01047 YP_019979.1 identified by match to PFAM protein family HMM PF03209 YP_019980.1 'similar to GP:11967274, and SP:P07062; identified by sequence similarity' YP_019982.1 identified by match to PFAM protein family HMM PF03840 YP_019983.1 identified by match to TIGR protein family HMM TIGR01842 YP_019984.1 'similar to GP:16411698, and GP:16411698; identified by sequence similarity' YP_019985.1 identified by match to PFAM protein family HMM PF03551 YP_022636.1 'similar to SP:P31631, GB:M62363, PID:150518, SP:P31631, GB:M62363, and PID:150518; identified by sequence similarity' YP_019986.1 'similar to SP:O31791, SP:P31631, GB:M62363, and PID:150518; identified by sequence similarity' YP_019987.1 'similar to SP:P31631, GB:M62363, and PID:150518; identified by sequence similarity' YP_019988.1 'similar to SP:Q45105, GB:D13292, GB:X67016, SP:P31431, PID:1944492, PID:286021, and PID:28680; identified by sequence similarity' YP_019990.1 similar to GP:13375091; identified by sequence similarity YP_019992.2 similar to GP:15022837; identified by sequence similarity YP_019995.1 'similar to GB:L07807, GB:L07810, GB:L07808, GB:L07809, SP:Q05193, PID:181849, and PID:181851; identified by sequence similarity' YP_019997.1 'similar to SP:P07121, PID:38895, SP:P07121, and PID:38895; identified by sequence similarity' YP_019998.1 similar to GP:5123517; identified by sequence similarity YP_020000.1 identified by match to TIGR protein family HMM TIGR01787 YP_020001.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity YP_020002.1 'similar to SP:P26822, GB:X62914, and PID:40571; identified by sequence similarity' YP_020003.1 'similar to SP:P33383, GB:M92449, and PID:190095; identified by sequence similarity' YP_020005.2 'similar to GP:5123874, and GP:5123874; identified by sequence similarity' YP_020006.1 similar to GP:15026564; identified by sequence similarity YP_020007.1 'similar to SP:P35092, and SP:P35093; identified by sequence similarity' YP_020008.1 'similar to SP:P19196, GB:X53368, GB:Z48169, PID:48574, and PID:793895; identified by sequence similarity' YP_020009.1 'catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG' YP_020012.1 'similar to SP:P05021, GB:X02826, PID:42609, GB:U00096, PID:1651460, PID:1787177, GB:X54637, SP:P29597, and PID:37504; identified by sequence similarity' YP_020013.1 'similar to GP:17225137, and SP:P23340; identified by sequence similarity' YP_020014.1 'similar to GP:15024644, and GP:15024644; identified by sequence similarity' YP_020015.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_020017.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_020018.1 'similar to GP:15023107, and GP:15023107; identified by sequence similarity' YP_020019.1 'similar to GP:15023106, and GP:15023106; identified by sequence similarity' YP_020022.1 similar to SP:P22705; identified by sequence similarity YP_020024.1 'similar to SP:P05845, GB:X17693, and PID:581281; identified by sequence similarity' YP_020025.2 'similar to SP:P15031, GB:M26397, PID:145928, PID:537128, GB:U00096, and PID:1790739; identified by sequence similarity' YP_020026.1 'similar to GP:5106364, and GP:5106364; identified by sequence similarity' YP_020027.2 identified by match to PFAM protein family HMM PF00583 YP_020028.1 'similar to GP:16410723, and GP:16410723; identified by sequence similarity' YP_020030.1 'similar to SP:P37598, GB:U00096, PID:1742732, PID:1742742, PID:1787949, SP:P37598, GB:U00096, PID:1742732, PID:1742742, and PID:1787949; identified by sequence similarity' YP_020031.1 'similar to GB:M65217, SP:Q03933, and PID:184405; identified by sequence similarity' YP_020032.1 'similar to GP:16412960, and GP:16412960; identified by sequence similarity' YP_020033.1 identified by match to PFAM protein family HMM PF03155 YP_020036.1 similar to SP:P77791; identified by sequence similarity YP_022639.1 'similar to GP:15980956, and GP:15980956; identified by sequence similarity' YP_022640.1 'catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA' YP_020043.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_052638.1 similar to SP:P37343; identified by sequence similarity YP_020046.1 identified by match to PFAM protein family HMM PF04226 YP_020047.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_020049.1 similar to GP:14970940; identified by sequence similarity YP_020050.1 identified by match to PFAM protein family HMM PF03137 YP_020051.1 identified by match to PFAM protein family HMM PF04212 YP_020053.1 identified by match to PFAM protein family HMM PF03733 YP_020055.1 'similar to SP:P09354, GB:M64082, SP:Q01740, and PID:182671; identified by sequence similarity' YP_020056.1 identified by match to PFAM protein family HMM PF03471 YP_020057.1 similar to SP:P80259; identified by sequence similarity YP_020058.2 'similar to SP:O31540, SP:P33159, GB:X68014, and PID:40807; identified by sequence similarity' YP_052639.1 'similar to GB:D13119, GB:X69907, SP:P05496, PID:179255, PID:285908, and PID:38430; identified by sequence similarity' YP_020061.1 'similar to GP:17431632, and GP:17431632; identified by sequence similarity' YP_020062.2 'similar to SP:P33255, PID:44303, SP:P33255, and PID:44303; identified by sequence similarity' YP_020063.1 identified by match to PFAM protein family HMM PF02782 YP_020064.1 'similar to GP:17431663, GB:M35878, GB:M31159, GB:X64875, GB:S56205, GB:M36121, SP:P17936, PID:183116, PID:386791, and PID:398164; identified by sequence similarity' YP_020065.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_020066.1 'similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate' YP_020067.1 'catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase' YP_020068.2 'catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate' YP_020069.1 'similar to SP:P54547, GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_020070.1 identified by match to TIGR protein family HMM TIGR01751 YP_020071.2 identified by match to PFAM protein family HMM PF00296 YP_020073.1 similar to GP:17132042; identified by sequence similarity YP_020074.1 'similar to SP:P31631, GB:M62363, and PID:150518; identified by sequence similarity' YP_020075.1 'similar to SP:Q00891, GB:Z19554, GB:M18888, GB:M18894, SP:P08670, PID:340219, PID:340234, PID:37848, PID:37850, and PID:37852; identified by sequence similarity' YP_020076.1 'similar to GP:15978438, and GP:15978438; identified by sequence similarity' YP_020077.1 similar to GP:15026393; identified by sequence similarity YP_020078.1 similar to GP:10803137; identified by sequence similarity YP_020079.1 'similar to SP:Q01563, GB:X65265, and PID:42200; identified by sequence similarity' YP_020080.3 'similar to SP:Q01563, GB:X65265, and PID:42200; identified by sequence similarity' YP_020081.1 identified by match to TIGR protein family HMM TIGR00013 YP_020082.2 'similar to GP:6689181, and GP:6689181; identified by sequence similarity' YP_020083.1 identified by match to TIGR protein family HMM TIGR00068 YP_020084.1 similar to GP:15979371; identified by sequence similarity YP_020086.1 similar to GP:6900951; identified by sequence similarity YP_020087.2 similar to SP:O74341; identified by sequence similarity YP_020089.1 the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress YP_020090.1 'similar to SP:Q01563, GB:X65265, PID:42200, SP:Q01563, GB:X65265, and PID:42200; identified by sequence similarity' YP_020091.1 similar to GP:16412819; identified by sequence similarity YP_020094.1 similar to GP:15023773; identified by sequence similarity YP_020095.1 'similar to SP:Q01563, GB:X65265, PID:42200, SP:Q01563, GB:X65265, and PID:42200; identified by sequence similarity' YP_020096.1 'similar to SP:Q01563, GB:X65265, PID:42200, SP:Q01563, GB:X65265, and PID:42200; identified by sequence similarity' YP_020097.1 identified by match to TIGR protein family HMM TIGR01293 YP_020100.1 identified by match to PFAM protein family HMM PF00301 YP_020101.1 'similar to GP:10175343, and GP:10175343; identified by sequence similarity' YP_020102.2 similar to GP:10130002; identified by sequence similarity YP_020104.1 identified by match to PFAM protein family HMM PF01678 YP_020105.1 identified by match to PFAM protein family HMM PF00583 YP_020106.1 similar to GP:11191973; identified by sequence similarity YP_020107.1 similar to GP:8708913; identified by sequence similarity YP_020108.1 'similar to SP:P32687, PID:409796, GB:U00096, and PID:1790459; identified by sequence similarity' YP_020114.1 similar to GP:1841966; identified by sequence similarity YP_020115.1 'similar to GP:4894353, and SP:O31178; identified by sequence similarity' YP_022643.1 'similar to SP:Q05174, and SP:Q05174; identified by sequence similarity' YP_022644.1 Heat shock-induced YP_020122.2 similar to GP:6470197; identified by sequence similarity YP_020123.1 'similar to GP:6470199, and GP:6470199; identified by sequence similarity' YP_020124.1 'similar to GB:X57352, SP:Q01628, SP:Q01629, and PID:23398; identified by sequence similarity' YP_020127.1 identified by match to PFAM protein family HMM PF03379 YP_020129.1 identified by match to PFAM protein family HMM PF02818 YP_020131.1 'similar to GP:16413179, and GP:16413179; identified by sequence similarity' YP_020132.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_020134.1 'similar to GP:14091413, and GP:14091413; identified by sequence similarity' YP_020135.1 similar to GP:14091412; identified by sequence similarity YP_020137.1 'similar to SP:P08063, PID:154718, PID:154801, SP:P08063, PID:154718, and PID:154801; identified by sequence similarity' YP_020138.1 'similar to GP:15024621, and GP:15024621; identified by sequence similarity' YP_020140.1 'similar to GP:15824171, GB:X80695, and PID:619491; identified by sequence similarity' YP_020142.2 identified by match to TIGR protein family HMM TIGR01813 YP_020143.1 'similar to GP:17740751, and GP:17740751; identified by sequence similarity' YP_020144.1 'similar to GB:L14787, GB:L14788, SP:P98168, SP:P98169, PID:292931, and PID:292933; identified by sequence similarity' YP_020145.2 'similar to GP:16410626, and GP:16410626; identified by sequence similarity' YP_020146.1 identified by match to PFAM protein family HMM PF00892 YP_020148.1 similar to GP:7416989; identified by sequence similarity YP_020151.2 'similar to GB:X72925, GB:Z34522, SP:Q08554, PID:457464, PID:505537, and PID:505538; identified by sequence similarity' YP_020153.1 similar to GP:16415457; identified by sequence similarity YP_020154.1 similar to GP:18250985; identified by sequence similarity YP_020155.2 'similar to GB:M30515, GB:M63599, GB:M20009, GB:X17290, GB:X17288, GB:X17369, GB:X17289, GB:M13577, GB:M30047, GB:M30516, GB:L18865, GB:L18866, GB:X17286, GB:X17287, SP:P02686, PID:187403, PID:307161, GB:M30515, GB:M63599, GB:M20009, GB:X17290, GB:X17288, GB:X17369, GB:X17289, GB:M13577, GB:M30047, GB:M30516, GB:L18865, GB:L18866, GB:X17286, GB:X17287, SP:P02686, PID:187403, and PID:307161; identified by sequence similarity' YP_020159.1 identified by match to PFAM protein family HMM PF02585 YP_020160.1 similar to GP:10175942; identified by sequence similarity YP_020161.1 identified by match to PFAM protein family HMM PF03606 YP_020165.1 'similar to GP:17131301, SP:P21324, and PID:145151; identified by sequence similarity' YP_020167.1 'similar to GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, PID:531476, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_020168.1 'similar to GP:16414573, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_020169.1 'similar to SP:P08656, and PID:459906; identified by sequence similarity' YP_020170.2 similar to GP:16413233; identified by sequence similarity YP_020171.1 'similar to SP:P13793, GB:D17795, GB:D17796, GB:M19405, PID:150844, PID:456492, PID:456494, PID:456496, PID:2443396, SP:P13793, GB:D17795, GB:D17796, GB:M19405, PID:150844, PID:456492, PID:456494, PID:456496, and PID:2443396; identified by sequence similarity' YP_020174.1 'similar to SP:P13963, GB:X06242, PID:39329, SP:P13963, GB:X06242, and PID:39329; identified by sequence similarity' YP_020175.1 'similar to SP:P13963, GB:X06242, and PID:39329; identified by sequence similarity' YP_020177.1 'similar to SP:P94501, SP:P25737, GB:M89774, PID:405901, PID:466778, GB:U00096, and PID:1788480; identified by sequence similarity' YP_020178.1 identified by match to TIGR protein family HMM TIGR01751 YP_020180.1 similar to GP:16413005; identified by sequence similarity YP_020181.1 identified by match to PFAM protein family HMM PF00583 YP_020182.1 similar to GP:14994414; identified by sequence similarity YP_020183.1 identified by match to PFAM protein family HMM PF03940 YP_020184.1 'converts 1,4-alpha-D-glucans to maltodextrin' YP_020186.1 identified by match to PFAM protein family HMM PF01432 YP_020187.1 'similar to GP:16412984, SP:P05343, GB:X12600, PID:43830, PID:43879, and PID:149343; identified by sequence similarity' YP_020188.2 'similar to GB:X07234, PID:46730, PID:47628, GB:X07234, PID:46730, and PID:47628; identified by sequence similarity' YP_020189.1 'similar to GP:17742264, and GP:17742264; identified by sequence similarity' YP_020190.1 'similar to SP:P94501, SP:P34024, GB:X54618, GB:X60035, and PID:581304; identified by sequence similarity' YP_020192.1 similar to GP:10129725; identified by sequence similarity YP_020193.1 identified by match to PFAM protein family HMM PF03009 YP_052640.1 'similar to GP:15823942, and GP:15823942; identified by sequence similarity' YP_020198.1 identified by match to PFAM protein family HMM PF01022 YP_020199.1 identified by match to TIGR protein family HMM TIGR01751 YP_020200.1 identified by match to PFAM protein family HMM PF02696 YP_020204.1 identified by match to PFAM protein family HMM PF04299 YP_020205.1 identified by match to PFAM protein family HMM PF04229 YP_020208.1 identified by match to PFAM protein family HMM PF03547 YP_020209.1 identified by match to PFAM protein family HMM PF02913 YP_020212.1 identified by match to TIGR protein family HMM TIGR01444 YP_020214.1 'similar to GB:X64318, GB:U26173, GB:S79880, PID:1237118, and PID:30956; identified by sequence similarity' YP_020215.1 'similar to SP:P22089, and PID:151338; identified by sequence similarity' YP_020216.1 similar to GP:15025356; identified by sequence similarity YP_020217.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_020218.1 'similar to SP:P43153, GB:D00306, GB:M18693, GB:M18694, GB:M18695, GB:M18696, GB:M18697, GB:M18698, GB:M18699, GB:M18700, GB:M16630, SP:P09093, SP:P11423, PID:182033, and PID:220014; identified by sequence similarity' YP_020219.2 similar to GP:16412090; identified by sequence similarity YP_020220.1 identified by match to PFAM protein family HMM PF00583 YP_020222.1 'similar to GB:J05480, and SP:Q08209; identified by sequence similarity' YP_020223.2 identified by match to PFAM protein family HMM PF04294 YP_020224.2 'similar to GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, and PID:691763; identified by sequence similari' YP_020225.1 'similar to SP:P01077, PID:217028, SP:P01077, and PID:217028; identified by sequence similarity' YP_020227.1 identified by match to PFAM protein family HMM PF03733 YP_020228.2 has 3'-5' exonuclease activity YP_020229.1 'similar to SP:P35088, PID:454074, GB:M81757, SP:P39019, and PID:337733; identified by sequence similarity' YP_020230.2 'similar to SP:P14877, GB:X06083, and PID:43369; identified by sequence similarity' YP_020231.2 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group' YP_020232.1 similar to GP:15978559; identified by sequence similarity YP_020233.1 'similar to GP:2641974, and GP:2641974; identified by sequence similarity' YP_020235.1 similar to GP:7542375; identified by sequence similarity YP_020236.1 similar to GP:13810411; identified by sequence similarity YP_020237.1 identified by match to TIGR protein family HMM TIGR01832 YP_020238.2 similar to GP:17134839; identified by sequence similarity YP_020239.1 catalyzes the formation of arginine and fumarate from arginosuccinate YP_020241.2 identified by match to PFAM protein family HMM PF01156 YP_020242.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase YP_020244.1 identified by match to TIGR protein family HMM TIGR01804 YP_020245.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_020247.2 'similar to SP:P33247, SP:P13954, GB:Y07536, PID:46552, and PID:46749; identified by sequence similarity' YP_020248.2 identified by match to PFAM protein family HMM PF03675 YP_020249.1 identified by match to TIGR protein family HMM TIGR00950 YP_020250.2 'similar to SP:P08782, GB:X07547, PID:40733, PID:40746, PID:1124828, and PID:1124827; identified by sequence similarity' YP_020252.1 'similar to GB:D26185, SP:P37506, PID:467359, and GB:AL009126; identified by sequence similarity' YP_020253.1 similar to GP:10172852; identified by sequence similarity YP_020254.2 'similar to SP:P30748, SP:P29438, GB:M17353, and PID:407187; identified by sequence similarity' YP_020255.1 similar to GP:10175641; identified by sequence similarity YP_020256.1 'similar to GP:2633799, SP:P23761, PID:296728, and PID:58350; identified by sequence similarity' YP_020257.1 catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways YP_020258.1 'similar to GB:M13241, GB:Y00664, GB:X03293, GB:X03294, GB:X03295, GB:M13228, GB:X03522, SP:P04198, PID:35076, PID:386982, PID:386983, and PID:871358; identified by sequence similarity' YP_020260.1 similar to SP:P39757; identified by sequence similarity YP_020261.2 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth YP_052641.1 similar to GP:1934609; identified by sequence similarity YP_020267.1 'similar to SP:P25737, GB:M89774, PID:405901, PID:466778, GB:U00096, and PID:1788480; identified by sequence similarity' YP_020268.1 similar to GP:3290176; identified by sequence similarity YP_020269.1 similar to SP:P07870; identified by sequence similarity YP_022649.1 identified by match to PFAM protein family HMM PF03367 YP_020274.1 'similar to SP:P07126, GB:X06084, GB:X07013, PID:43377, SP:P07126, GB:X06084, GB:X07013, and PID:43377; identified by sequence similarity' YP_020275.1 identified by match to PFAM protein family HMM PF03848 YP_020276.1 'similar to GP:10717143, and GP:10717143; identified by sequence similarity' YP_020277.1 'similar to GP:10717143, and GP:309662; identified by sequence similarity' YP_020278.1 'similar to GP:10717143, and GP:10717143; identified by sequence similarity' YP_020281.1 similar to GP:16415198; identified by sequence similarity YP_020283.1 identified by match to PFAM protein family HMM PF00776 YP_020288.1 'similar to GB:L08389, SP:Q04720, and PID:143198; identified by sequence similarity' YP_020289.2 identified by match to PFAM protein family HMM PF00440 YP_020290.1 'similar to SP:O32223, SP:P09123, and PID:452398; identified by sequence similarity' YP_020291.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_020292.2 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_020293.1 'similar to SP:P35092, and SP:P35093; identified by sequence similarity' YP_020294.1 similar to GP:6063141; identified by sequence similarity YP_020295.1 'similar to GP:15025451, and GP:15025451; identified by sequence similarity' YP_020298.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_020299.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX YP_020300.1 'similar to SP:P35092, SP:P35093, SP:P35092, and SP:P35093; identified by sequence similarity' YP_020301.1 identified by match to PFAM protein family HMM PF03061 YP_020302.1 similar to GP:7212792; identified by sequence similarity YP_020303.1 'similar to SP:P07779, GB:X06452, and PID:38742; identified by sequence similarity' YP_020304.1 SASP N; found in forespore compartment YP_020306.1 3'-5' exonuclease of DNA polymerase III YP_020308.1 'similar to SP:P35160, SP:P07779, GB:X06452, and PID:38742; identified by sequence similarity' YP_020309.1 identified by match to TIGR protein family HMM TIGR01193 YP_020310.1 Catalyzes the conversion of citrate to isocitrate YP_020311.1 SASP O; found in forespore compartment YP_020312.1 similar to GP:17130883; identified by sequence similarity YP_020313.1 'similar to GB:L31427, PID:551737, and GB:AE000790; identified by sequence similarity' YP_020314.1 'similar to SP:P29019, and PID:142873; identified by sequence similarity' YP_020315.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, PID:219501, GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_020317.1 similar to GP:15023805; identified by sequence similarity YP_020318.1 'similar to GP:15623365, GB:U14973, SP:P30054, PID:1220361, PID:550027, GB:U14973, SP:P30054, PID:1220361, and PID:550027; identified by sequence similarity' YP_020319.1 identified by match to PFAM protein family HMM PF02037 YP_020320.1 'Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation' YP_020321.1 activates fatty acids by binding to coenzyme A YP_020322.1 'similar to SP:P14027, GB:X15972, and PID:44789; identified by sequence similarity' YP_020323.1 similar to SP:Q00594; identified by sequence similarity YP_020326.1 identified by match to PFAM protein family HMM PF00583 YP_020327.1 similar to GP:16411628; identified by sequence similarity YP_020328.2 similar to SP:P94217; identified by sequence similarity YP_020329.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis YP_020330.1 similar to GP:15980232; identified by sequence similarity YP_020331.1 'similar to GP:7304009, SP:P28056, and PID:38963; identified by sequence similarity' YP_020333.1 identified by match to PFAM protein family HMM PF02588 YP_020334.1 'similar to GP:17739039, and GP:17739039; identified by sequence similarity' YP_020335.1 similar to GP:6686907; identified by sequence similarity YP_020336.1 'similar to SP:P21502, GB:X51662, PID:41810, GB:U00096, PID:1778450, and PID:1786747; identified by sequence similarity' YP_020337.1 'similar to SP:P38100, and PID:1750387; identified by sequence similarity' YP_020338.2 similar to SP:O06493; identified by sequence similarity YP_020339.1 'similar to GP:2577963, SP:P37063, GB:X72001, and GB:X73296; identified by sequence similarity' YP_020340.1 identified by match to PFAM protein family HMM PF04131 YP_020341.1 'similar to SP:P35852, and PID:308866; identified by sequence similarity' YP_020342.2 catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate YP_020343.1 'catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway' YP_020344.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_020345.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_020346.1 regulates expression of hut operon by antitermination mechanism; forms a homohexamer; binds both magnesium and L-histidine and then binds RNA sequences within the terminator region and destabilizes the terminator structure YP_020347.1 similar to GP:2982680; identified by sequence similarity YP_020348.1 identified by match to TIGR protein family HMM TIGR01383 YP_020350.1 similar to GP:2655888; identified by sequence similarity YP_020363.1 identified by match to PFAM protein family HMM PF03334 YP_020364.1 identified by match to PFAM protein family HMM PF02683 YP_020365.1 'similar to GP:15023060, and GP:15023060; identified by sequence similarity' YP_020366.2 'similar to GB:X06233, GB:M21064, GB:A12031, GB:A12029, SP:P06702, PID:34771, PID:386958, PID:490104, PID:490108, and PID:516621; identified by sequence similarity' YP_020367.1 increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation; inhibited by the antiholin-like proteins lrgAB YP_020368.1 identified by match to PFAM protein family HMM PF04172 YP_020369.1 'similar to SP:P00482, GB:M93136, GB:K00127, PID:147295, PID:148102, PID:148109, PID:396376, PID:1790474, SP:P00482, GB:M93413, GB:K00127, PID:147295, PID:148102, PID:148109, PID:396376, PID:1790474, SP:P00482, GB:M93136, GB:K00127, PID:147295, PID:148102, PID:148109, PID:396376, PID:1790474, SP:P00482, GB:M93413, GB:K00127, PID:147295, PID:148102, PID:148109, PID:396376, and PID:1790474; identified by sequence similarity' YP_020375.1 identified by match to PFAM protein family HMM PF00395 YP_020378.1 identified by match to TIGR protein family HMM TIGR01193 YP_020379.1 'similar to GP:10174956, and SP:P77265; identified by sequence similarity' YP_020380.1 identified by match to PFAM protein family HMM PF03672 YP_020383.1 'catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase' YP_020384.1 'similar to GB:D31766, SP:P46926, and PID:498158; identified by sequence similarity' YP_020385.1 similar to SP:P16683; identified by sequence similarity YP_020386.1 similar to SP:P16683; identified by sequence similarity YP_020387.2 identified by match to TIGR protein family HMM TIGR01188 YP_020388.1 identified by match to PFAM protein family HMM PF03180 YP_020391.1 'similar to SP:P37747, GB:U03041, GB:U09876, PID:508242, PID:510253, GB:U00096, PID:1788348, SP:P37747, GB:U03041, GB:U09876, PID:508242, PID:510253, GB:U00096, and PID:1788348; identified by sequence similarity' YP_020392.1 'similar to SP:P37747, GB:U03041, GB:U09876, PID:508242, PID:510253, GB:U00096, PID:1788348, SP:P37747, GB:U03041, GB:U09876, PID:508242, PID:510253, GB:U00096, and PID:1788348; identified by sequence similarity' YP_020393.1 Represses a number of genes involved in the response to DNA damage YP_020394.1 similar to GP:16413050; identified by sequence similarity YP_020395.1 'similar to GP:15023440, and GP:15023440; identified by sequence similarity' YP_020396.2 'similar to GP:15023439, and GP:16409988; identified by sequence similarity' YP_020399.1 'similar to GP:1881311, SP:P16694, PID:455180, PID:536953, GB:U00096, and PID:1790548; identified by sequence similarity' YP_020400.1 'similar to GP:15024891, and GP:15024891; identified by sequence similarity' YP_020402.2 identified by match to TIGR protein family HMM TIGR01764 YP_020403.1 'similar to GP:4126632, and SP:P32982; identified by sequence similarity' YP_020404.1 similar to GP:16412594; identified by sequence similarity YP_020405.1 similar to GP:15023153; identified by sequence similarity YP_020410.1 identified by match to PFAM protein family HMM PF02987 YP_020411.1 'similar to GP:16415090, and GP:16415090; identified by sequence similarity' YP_020413.1 'similar to GP:16415092, and GP:16415092; identified by sequence similarity' YP_020414.1 similar to GP:16415093; identified by sequence similarity YP_020416.1 'similar to GP:16415094, and GP:16415094; identified by sequence similarity' YP_020417.1 similar to GP:12723997; identified by sequence similarity YP_020418.1 similar to GP:16415096; identified by sequence similarity YP_020419.2 'similar to SP:P18177, GB:X53138, PID:40443, PID:40446, and PID:1770133; identified by sequence similarity' YP_020421.1 identified by match to TIGR protein family HMM TIGR01554 YP_020422.1 identified by match to TIGR protein family HMM TIGR01543 YP_020423.1 identified by match to TIGR protein family HMM TIGR01537 YP_020424.1 similar to GP:12697860; identified by sequence similarity YP_020427.1 'similar to GP:4126654, and GP:4126654; identified by sequence similarity' YP_020428.1 identified by match to PFAM protein family HMM PF02687 YP_020429.1 identified by match to TIGR protein family HMM TIGR01764 YP_020431.1 similar to GP:5139577; identified by sequence similarity YP_020432.1 'similar to GP:10644760, and GP:10644760; identified by sequence similarity' YP_020433.1 similar to GP:18148906; identified by sequence similarity YP_020435.1 'similar to GP:17135733, and GP:17135733; identified by sequence similarity' YP_020436.1 Positive regulatory protein that acts at the late promoter PL YP_020438.1 identified by match to PFAM protein family HMM PF03329 YP_020443.1 'similar to SP:P15435, PID:46650, and PID:490195; identified by sequence similarity' YP_020444.1 identified by match to TIGR protein family HMM TIGR01637 YP_020447.1 identified by match to PFAM protein family HMM PF02511 YP_020448.1 similar to GP:2760954; identified by sequence similarity YP_020452.1 identified by match to PFAM protein family HMM PF01695 YP_020453.1 'similar to GP:11138333, and GP:11138333; identified by sequence similarity' YP_020455.1 'similar to GP:2924242, and GP:2924242; identified by sequence similarity' YP_020456.1 'similar to GP:16411789, and GP:16411789; identified by sequence similarity' YP_022660.1 'similar to GB:M68059, PID:147069, GB:M68059, and PID:147069; identified by sequence similarity' YP_020459.1 similar to GP:14247798; identified by sequence similarity YP_020461.1 'similar to GP:15026740, and GP:15026740; identified by sequence similarity' YP_020462.1 'similar to GP:4526649, and GP:4526649; identified by sequence similarity' YP_020463.1 'similar to SP:P10426, GB:X64061, SP:P28761, and PID:1335607; identified by sequence similarity' YP_020467.1 similar to SP:P12425; identified by sequence similarity YP_020468.1 'similar to GB:X67055, GB:X14690, PID:1628399, PID:288563, and PID:35465; identified by sequence similarity' YP_020469.1 'similar to GP:2827439, and SP:P04028; identified by sequence similarity' YP_020472.1 'similar to SP:P09123, PID:452398, SP:P09123, and PID:452398; identified by sequence similarity' YP_020474.1 similar to GP:40197; identified by sequence similarity YP_020475.1 similar to GP:4894234; identified by sequence similarity YP_020476.1 identified by match to PFAM protein family HMM PF02949 YP_020478.1 Stimulates the elongation of poly(A) tails YP_020479.2 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_020481.1 'similar to GP:16412644, and GP:16412644; identified by sequence similarity' YP_020482.1 identified by match to PFAM protein family HMM PF03239 YP_020483.1 'similar to SP:P27369, and PID:154510; identified by sequence similarity' YP_020484.1 'similar to SP:P27369, and PID:154510; identified by sequence similarity' YP_020487.1 'similar to GP:16410045, SP:Q05878, and PID:581756; identified by sequence similarity' YP_020490.2 similar to GP:969027; identified by sequence similarity YP_020491.1 similar to GP:14578848; identified by sequence similarity YP_020493.1 'similar to SP:P09150, GB:M10743, PID:147467, PID:147470, PID:537088, GB:U00096, PID:1790694, SP:P09150, GB:M10743, PID:147467, PID:147470, PID:537088, GB:U00096, and PID:1790694; identified by sequence similarity' YP_020494.1 'similar to GB:M13241, GB:Y00664, GB:X03293, GB:X03294, GB:X03295, GB:M13228, GB:X03522, SP:P04198, PID:35076, PID:386982, PID:386983, and PID:871358; identified by sequence similarity' YP_020495.1 similar to SP:P02346; identified by sequence similarity YP_020497.1 'similar to SP:P09123, and PID:452398; identified by sequence similarity' YP_020498.1 similar to SP:Q47840; identified by sequence similarity YP_020499.1 'similar to SP:P09123, PID:452398, SP:P09123, and PID:452398; identified by sequence similarity' YP_020500.1 'similar to SP:P11447, GB:J01590, GB:M21446, PID:145335, PID:396307, GB:U00096, and PID:1790398; identified by sequence similarity' YP_020501.1 'similar to SP:P33357, PID:405857, GB:U00096, PID:1788446, SP:P33357, PID:405857, GB:U00096, and PID:1788446; identified by sequence similarity' YP_020502.1 'similar to GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_020503.1 'similar to GB:M15400, GB:L11910, GB:M27845, GB:M27846, GB:M27847, GB:M27848, GB:M27849, GB:M27850, GB:M27851, GB:L35146, GB:M27852, GB:M27853, GB:M27854, GB:M27855, GB:M27856, GB:M27857, GB:M27858, GB:M27859, GB:M27860, GB:L35147, GB:M27862, GB:M27863, GB:M27864, GB:M27865, GB:M27866, GB:M28419, GB:M33647, GB:L41892, GB:L41915, GB:L41921, GB:L41904, GB:L41898, GB:L41923, GB:L42000, GB:L41891, GB:L49214, GB:L41897, GB:L49215, GB:L49216, GB:L41899, GB:L49233, GB:L41911, GB:L41890, GB:L41894, GB:L41900, GB:S67080, SP:P06400, PID:1088319, PID:1088325, PID:1088327, PID:1088337, PID:190946, PID:190959, PID:190963, PID:292421, PID:35895, PID:521212, PID:793949, PID:793951, PID:793953, PID:793957, PID:793963, PID:793965, PID:793971, PID:793988, PID:793990, PID:793992, PID:793995, PID:793999, PID:794001, PID:794003, PID:794007, PID:794016, PID:804756, PID:804758, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identi' YP_020504.1 identified by match to PFAM protein family HMM PF03594 YP_020508.1 'similar to GB:D10704, SP:P35790, and PID:219541; identified by sequence similarity' YP_020509.1 'similar to SP:P19219, GB:L07557, GB:X98025, GB:X98027, GB:X98029, GB:X98022, GB:X98024, GB:X98026, GB:X98028, SP:Q05086, and PID:178745; identified by sequence similarity' YP_020510.1 identified by match to PFAM protein family HMM PF02870 YP_020511.1 identified by match to TIGR protein family HMM TIGR00588 YP_020512.1 catalyzes the release of the N-terminal amino acid from a tripeptide YP_020513.1 identified by match to PFAM protein family HMM PF04172 YP_020514.1 'similar to GB:D00068, GB:M11805, GB:M11806, GB:M11807, GB:M11808, GB:M11809, GB:M11810, GB:X02661, GB:X02874, GB:X02875, GB:X04371, SP:P00973, SP:P04820, PID:23794, PID:34394, PID:35125, PID:386986, PID:490134, and PID:490136; identified by sequence similarity' YP_020515.1 identified by match to PFAM protein family HMM PF00300 YP_020516.1 similar to GP:15025987; identified by sequence similarity YP_020517.1 'similar to GB:X52142, SP:P17812, and PID:30293; identified by sequence similarity' YP_020518.1 similar to GP:6759486; identified by sequence similarity YP_020520.1 'similar to GB:L11931, GB:L23928, SP:P34896, and PID:438634; identified by sequence similarity' YP_020521.1 'similar to SP:P38119, PID:466983, SP:P38119, and PID:466983; identified by sequence similarity' YP_020522.1 'similar to GB:L24203, and PID:401763; identified by sequence similarity' YP_020523.1 increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation; inhibited by the antiholin-like proteins lrgAB YP_020524.1 'similar to GP:16411570, and GP:16411570; identified by sequence similarity' YP_020525.1 'similar to SP:P37983, GB:X74750, and PID:399670; identified by sequence similarity' YP_020526.1 identified by match to PFAM protein family HMM PF02585 YP_020528.1 'similar to SP:P08954, GB:M97925, SP:Q01523, and PID:181533; identified by sequence similarity' YP_020529.1 'similar to GP:6759476, and GP:6759476; identified by sequence similarity' YP_020530.1 'similar to GP:6759475, and GP:6759475; identified by sequence similarity' YP_020531.1 'similar to GP:6759474, and GP:15026693; identified by sequence similarity' YP_020532.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_020534.1 identified by match to PFAM protein family HMM PF03205 YP_020536.1 'similar to GB:M37435, GB:M27087, GB:M11038, GB:M11295, GB:M11296, GB:M64592, SP:P09603, PID:181135, PID:181144, PID:187463, PID:508986, PID:757917, and PID:758781; identified by sequence similarity' YP_020537.1 'similar to GP:16223978, and SP:P33113; identified by sequence similarity' YP_020538.1 'similar to GP:3849845, and SP:P33112; identified by sequence similarity' YP_020539.1 'similar to GP:9802354, and GP:9802354; identified by sequence similarity' YP_020540.1 'similar to GP:9802353, GB:M27332, GB:M17324, GB:M14999, GB:M15001, GB:M15002, SP:P03986, PID:37018, PID:540459, PID:540461, and PID:540464; identified by sequence similarity' YP_020541.1 'similar to GP:9802352, GB:M27332, GB:M17324, GB:M14999, GB:M15001, GB:M15002, SP:P03986, PID:37018, PID:540459, PID:540461, and PID:540464; identified by sequence similarity' YP_020542.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex YP_020544.1 This protein performs the mismatch recognition step during the DNA repair process YP_020545.1 'similar to GB:L14812, GB:M74547, SP:P28749, PID:292374, and PID:347378; identified by sequence similarity' YP_020547.1 'similar to SP:P33370, PID:405870, GB:U00096, PID:1788461, SP:P33370, PID:405870, GB:U00096, and PID:1788461; identified by sequence similarity' YP_020548.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_020549.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_020550.1 identified by match to PFAM protein family HMM PF02780 YP_020551.1 similar to GP:9719426; identified by sequence similarity YP_020552.1 identified by match to PFAM protein family HMM PF04232 YP_020553.1 'similar to SP:P05343, GB:X12600, PID:43830, PID:43879, PID:149343, SP:P05343, GB:X12600, PID:43830, PID:43879, and PID:149343; identified by sequence similarity' YP_020554.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP YP_020557.1 'similar to GP:1842440, SP:Q04730, and PID:142946; identified by sequence similarity' YP_020558.1 identified by match to TIGR protein family HMM TIGR00473 YP_020559.1 'similar to GP:1842438, and GP:16413905; identified by sequence similarity' YP_020562.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_020563.1 'similar to GP:10175012, and GP:2634058; identified by sequence similarity' YP_020564.1 'similar to GP:10175013, and GP:10175013; identified by sequence similarity' YP_020568.1 'similar to SP:P26908, PID:40173, and GB:AL009126; identified by sequence similarity' YP_020569.1 'similar to SP:P26908, PID:40173, GB:AL009126, SP:P26908, PID:40173, and GB:AL009126; identified by sequence similarity' YP_020570.1 similar to SP:P80259; identified by sequence similarity YP_020571.1 'similar to GB:J03528, GB:Y00285, GB:S80785, GB:S80783, SP:P11717, PID:1006661, PID:1063394, PID:188672, PID:33055, and PID:929647; identified by sequence similarity' YP_020573.1 identified by match to TIGR protein family HMM TIGR00706 YP_020574.2 similar to GP:10175018; identified by sequence similarity YP_020575.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_020576.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive YP_020577.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_020578.1 'involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme' YP_020579.1 catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance YP_020580.1 'similar to GB:M27504, GB:Z15111, GB:S56813, GB:X68060, GB:Z15115, GB:D17023, SP:Q02880, PID:1354507, PID:2088635, PID:288565, PID:288567, PID:339810, PID:37231, PID:38325, GB:M27504, GB:Z15111, GB:S56813, GB:X68060, GB:Z15115, GB:D17023, SP:Q02880, PID:1354507, PID:2088635, PID:288565, PID:288567, PID:339810, PID:37231, and PID:38325; identified by sequence similarity' YP_020581.1 similar to SP:Q04805; identified by sequence similarity YP_020582.1 'similar to SP:P33929, PID:405924, GB:U00096, and PID:1788527; identified by sequence similarity' YP_020583.1 'similar to SP:P50849, GB:D10216, GB:D11334, GB:D11333, GB:X72215, GB:L18781, GB:X62429, GB:X77223, GB:X77224, GB:D12892, GB:S73501, GB:D12887, GB:D12888, GB:D12889, GB:D12890, GB:D12891, SP:P28069, and PID:488129; identified by sequence similarity' YP_020584.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_020585.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities YP_020587.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_020589.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_020590.1 'similar to SP:P32729, GB:L15189, GB:L11066, GB:D17027, GB:D17196, SP:P38646, and PID:292059; identified by sequence similarity' YP_020591.1 'similar to GB:L04751, SP:Q02928, PID:181397, PID:535787, and PID:994758; identified by sequence similarity' YP_020592.1 'modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination' YP_020593.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_020594.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity YP_020596.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_020597.1 identified by match to PFAM protein family HMM PF02472 YP_020598.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_020599.1 'similar to SP:O31752, SP:P14707, GB:X15942, and PID:46875; identified by sequence similarity' YP_020600.2 catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate YP_020601.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_020602.2 Catalyzes the phosphorylation of UMP to UDP YP_020603.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_020604.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_020605.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_020606.1 heat shock protein involved in degradation of misfolded proteins YP_020607.1 heat shock protein involved in degradation of misfolded proteins YP_020608.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_020609.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_020610.1 'catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity' YP_020612.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_020613.1 catalyzes the interconversion of succinyl-CoA and succinate YP_020614.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_020615.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc) YP_020616.1 'similar to GP:16413783, and SP:P28628; identified by sequence similarity' YP_020617.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_020618.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_020619.1 Essential for efficient processing of 16S rRNA YP_020620.1 similar to GP:16411250; identified by sequence similarity YP_020621.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_020622.1 'similar to SP:P37105, GB:M82827, GB:X56058, SP:P29590, SP:P29591, SP:P29592, SP:P29593, SP:Q00755, and PID:182796; identified by sequence similarity' YP_020623.1 'similar to GB:L19067, GB:U33838, GB:Z22949, GB:Z22953, GB:M62399, SP:Q04206, PID:189504, PID:415825, PID:415831, GB:L19067, GB:U33838, GB:Z22949, GB:Z22953, GB:M62399, SP:Q04206, PID:189504, PID:415825, and PID:415831; identified by sequence similarity' YP_020624.1 similar to SP:P51835; identified by sequence similarity YP_020625.1 'similar to GB:L11931, GB:L23928, SP:P34896, and PID:438634; identified by sequence similarity' YP_020627.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_020628.1 carries the fatty acid chain in fatty acid biosynthesis YP_020629.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_020630.1 identified by match to PFAM protein family HMM PF00698 YP_022666.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_022667.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria YP_022668.1 catalyzes branch migration in Holliday junction intermediates YP_020634.2 'similar to SP:P38387, and PID:466811; identified by sequence similarity' YP_020635.1 'similar to SP:P38387, PID:466811, SP:P38387, and PID:466811; identified by sequence similarity' YP_020636.1 required for 70S ribosome assembly YP_020637.1 'similar to SP:P38387, PID:466811, SP:P38387, and PID:466811; identified by sequence similarity' YP_020638.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate YP_020639.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity YP_020640.2 similar to GP:2337806; identified by sequence similarity YP_020641.1 identified by match to PFAM protein family HMM PF02829 YP_020642.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_020643.1 similar to SP:P94464; identified by sequence similarity YP_020645.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth YP_020646.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_020647.1 'binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity' YP_020649.1 'catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine' YP_020650.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_020651.1 'Essential for recycling GMP and indirectly, cGMP' YP_020652.1 identified by match to PFAM protein family HMM PF04025 YP_020653.1 'similar to SP:P11744, GB:M95287, GB:M80188, GB:L06418, GB:U04278, GB:X12870, GB:X15024, GB:X58425, PID:149120, PID:150401, PID:151823, PID:42647, PID:43094, PID:48209, PID:523334, PID:530820, PID:551866, PID:1197824, SP:P11744, GB:M95287, GB:M80188, GB:L06418, GB:U04278, GB:X12870, GB:X15024, GB:X58425, PID:149120, PID:150401, PID:151823, PID:42647, PID:43094, PID:48209, PID:523334, PID:530820, PID:551866, and PID:1197824; identified by sequence similarity' YP_020654.1 'similar to SP:P11744, GB:M95287, GB:M80188, GB:L06418, GB:U04278, GB:X12870, GB:X15024, GB:X58425, PID:149120, PID:150401, PID:151823, PID:42647, PID:43094, PID:48209, PID:523334, PID:530820, PID:551866, and PID:1197824; identified by sequence similarity' YP_020655.1 'similar to SP:P11744, GB:M95287, GB:M80188, GB:L06418, GB:U04278, GB:X12870, GB:X15024, GB:X58425, PID:149120, PID:150401, PID:151823, PID:42647, PID:43094, PID:48209, PID:523334, PID:530820, PID:551866, and PID:1197824; identified by sequence similarity' YP_020656.1 identified by match to TIGR protein family HMM TIGR00501 YP_020658.1 'similar to SP:P07121, PID:38895, SP:P07121, and PID:38895; identified by sequence similarity' YP_020659.1 'similar to SP:P80046, and PID:1478267; identified by sequence similarity' YP_020660.1 'similar to SP:P37598, GB:U00096, PID:1742732, PID:1742742, and PID:1787949; identified by sequence similarity' YP_020663.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_020664.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_020665.1 'catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits' YP_020666.1 responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) YP_020667.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_020668.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_020669.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_020670.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_020671.1 'similar to GB:M23197, SP:P20138, and PID:180098; identified by sequence similarity' YP_020672.1 'regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity' YP_020674.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_020675.2 'similar to GP:1373155, and GP:1373155; identified by sequence similarity' YP_020676.1 'IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme' YP_020677.1 identified by match to PFAM protein family HMM PF04271 YP_020678.1 identified by match to PFAM protein family HMM PF01479 YP_020679.1 similar to GP:10175168; identified by sequence similarity YP_020680.1 'similar to SP:P22403, and PID:484007; identified by sequence similarity' YP_020681.1 'similar to SP:P22403, PID:484007, SP:P22403, and PID:484007; identified by sequence similarity' YP_020682.1 'similar to SP:P22403, PID:484007, SP:P22403, and PID:484007; identified by sequence similarity' YP_020683.1 'similar to SP:P22403, PID:484007, SP:P22403, and PID:484007; identified by sequence similarity' YP_020684.2 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin YP_020685.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation YP_020686.1 'similar to GB:M60527, SP:P27707, and PID:181510; identified by sequence similarity' YP_020687.1 'GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function' YP_020688.1 identified by match to TIGR protein family HMM TIGR01175 YP_020689.1 similar to GP:16414654; identified by sequence similarity YP_020690.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_020691.2 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_020692.1 'similar to GB:M21121, GB:S64885, SP:P13501, and PID:339421; identified by sequence similarity' YP_020693.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_020694.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_020695.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_020696.1 'similar to GB:M94579, GB:S70516, GB:S40178, GB:S79774, SP:P19835, PID:1567198, PID:180244, PID:187150, PID:29501, GB:M94579, GB:S70516, GB:S40178, GB:S79774, SP:P19835, PID:1567198, PID:180244, PID:187150, and PID:29501; identified by sequence similarity' YP_020697.1 'similar to GB:X63563, SP:P30876, PID:36122, GB:X63563, SP:P30876, and PID:36122; identified by sequence similarity' YP_020698.1 similar to GP:7688135; identified by sequence similarity YP_020700.1 'similar to SP:O07104, GB:X15606, SP:P13598, PID:32624, and PID:386792; identified by sequence similarity' YP_020701.1 'similar to GB:U12770, GB:U12774, GB:U12775, GB:L37019, SP:P42127, PID:540073, PID:608648, GB:U12770, GB:U12774, GB:U12775, GB:L37019, SP:P42127, PID:540073, and PID:608648; identified by sequence similarity' YP_022670.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis YP_020704.1 'similar to SP:Q05373, and PID:49227; identified by sequence similarity' YP_020705.1 'similar to SP:O34549, SP:Q05373, and PID:49227; identified by sequence similarity' YP_020706.2 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_020707.1 'similar to GP:10175205, and GP:10175205; identified by sequence similarity' YP_020710.1 identified by match to PFAM protein family HMM PF01580 YP_020713.1 identified by match to PFAM protein family HMM PF01381 YP_020715.1 similar to GP:3582206; identified by sequence similarity YP_020716.1 'similar to GB:L06499, SP:P12751, PID:292439, PID:36134, GB:X55885, SP:P24390, and PID:34031; identified by sequence similarity' YP_020717.1 'similar to GP:16409487, and GP:16409487; identified by sequence similarity' YP_020718.1 similar to GP:15024028; identified by sequence similarity YP_020719.1 similar to GP:15023153; identified by sequence similarity YP_020721.1 identified by match to TIGR protein family HMM TIGR01665 YP_020722.1 identified by match to TIGR protein family HMM TIGR01633 YP_020724.2 'similar to GP:16411757, and GP:4126623; identified by sequence similarity' YP_020725.1 similar to GP:4126622; identified by sequence similarity YP_020727.1 'similar to GP:4126621, and GP:4126621; identified by sequence similarity' YP_020729.1 'similar to GP:4126620, and GP:4126620; identified by sequence similarity' YP_020730.1 'similar to GP:15024867, and GP:15024867; identified by sequence similarity' YP_020731.1 'similar to GP:4126618, and GP:4126618; identified by sequence similarity' YP_020733.1 'similar to GP:6739660, GP:6739660, and GP:6739660; identified by sequence similarity' YP_020734.1 identified by match to TIGR protein family HMM TIGR01560 YP_020735.1 'similar to GP:2429326, and GP:2429326; identified by sequence similarity' YP_020736.1 'similar to GP:15024871, and GP:15024871; identified by sequence similarity' YP_020737.2 similar to GP:15024872; identified by sequence similarity YP_020738.1 'similar to GP:15024873, and GP:15024873; identified by sequence similarity' YP_020739.2 similar to GP:15024874; identified by sequence similarity YP_020740.1 similar to GP:3647294; identified by sequence similarity YP_020741.1 similar to GP:15024876; identified by sequence similarity YP_020742.1 similar to GP:6760232; identified by sequence similarity YP_020743.1 similar to GP:8918862; identified by sequence similarity YP_020744.1 'similar to GP:15024550, and GP:15024550; identified by sequence similarity' YP_022671.1 identified by match to TIGR protein family HMM TIGR01637 YP_022672.1 similar to GP:15025492; identified by sequence similarity YP_022673.1 'similar to GP:5524025, and GP:5524025; identified by sequence similarity' YP_020752.1 similar to GP:21685418; identified by sequence similarity YP_020753.1 catalyzes resistance to fosfomycin by the addition of a thiol cofactor YP_020754.2 'similar to GP:16411781, and GP:16411781; identified by sequence similarity' YP_020755.2 similar to GP:17985301; identified by sequence similarity YP_020756.1 'similar to GP:15024366, GB:U14003, SP:P39362, PID:537142, GB:U00096, and PID:1790754; identified by sequence similarity' YP_020759.1 'similar to GB:S76965, and SP:P04541; identified by sequence similarity' YP_020764.1 'similar to GP:15024913, GB:J03278, GB:M30493, SP:P09619, PID:189730, PID:189732, PID:2107947, and PID:532593; identified by sequence similarity' YP_020765.1 'similar to GP:12829835, and GP:12829835; identified by sequence similarity' YP_020768.1 'similar to GB:X63449, SP:Q02054, PID:46808, GB:X63449, SP:Q02054, and PID:46808; identified by sequence similarity' YP_020769.1 similar to GP:16414248; identified by sequence similarity YP_052642.1 similar to GP:16414249; identified by sequence similarity YP_020774.1 similar to GP:4884026; identified by sequence similarity YP_022674.1 similar to GP:16412493; identified by sequence similarity YP_020777.1 'similar to SP:P25051, GB:X56895, PID:155042, and PID:43336; identified by sequence similarity' YP_020778.2 identified by match to PFAM protein family HMM PF00589 YP_020779.1 'similar to SP:P06540, and PID:142006; identified by sequence similarity' YP_020780.1 'similar to SP:P06540, and PID:142006; identified by sequence similarity' YP_020781.1 'similar to SP:P06540, PID:142006, SP:P06540, and PID:142006; identified by sequence similarity' YP_020783.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_020784.1 similar to GP:16411523; identified by sequence similarity YP_022675.1 'similar to SP:P06540, and PID:142006; identified by sequence similarity' YP_020790.1 'similar to SP:P06540, PID:142006, SP:P06540, and PID:142006; identified by sequence similarity' YP_020791.1 'similar to SP:P14027, GB:X15972, and PID:44789; identified by sequence similarity' YP_020792.1 'similar to SP:P35647, GB:Z12609, PID:41332, SP:P35647, GB:Z12609, and PID:41332; identified by sequence similarity' YP_020793.1 'similar to SP:P35647, GB:Z12609, PID:41332, SP:P35647, GB:Z12609, and PID:41332; identified by sequence similarity' YP_020795.1 'similar to SP:P37820, PID:396204, SP:P37820, and PID:396204; identified by sequence similarity' YP_020796.1 formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate YP_020797.1 'similar to SP:P37820, and PID:396204; identified by sequence similarity' YP_020798.1 'similar to GB:L27515, SP:P45689, and PID:532254; identified by sequence similarity' YP_020799.1 'similar to GB:M59301, SP:P21921, PID:151177, and PID:1926453; identified by sequence similarity' YP_020800.1 'similar to GB:X58924, SP:P41199, and PID:313017; identified by sequence similarity' YP_020801.2 similar to GP:4584151; identified by sequence similarity YP_020802.1 converts protoheme IX and farnesyl diphosphate to heme O YP_020803.1 'similar to GP:4584149, and SP:P12946; identified by sequence similarity' YP_020804.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_020805.2 'similar to SP:P33234, GB:U02384, PID:407284, PID:536961, GB:U00096, and PID:1790557; identified by sequence similarity' YP_020806.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein YP_020808.1 identified by match to PFAM protein family HMM PF02562 YP_020810.1 'similar to SP:Q05489, PID:49206, PID:640960, PID:1247764, SP:Q05489, PID:49206, PID:640960, and PID:1247764; identified by sequence similarity' YP_020812.1 'similar to SP:Q05489, PID:49206, PID:640960, PID:1247764, SP:Q05489, PID:49206, PID:640960, PID:1247764, SP:Q05489, PID:49206, PID:640960, and PID:1247764; identified by sequence similarity' YP_020813.1 'similar to SP:Q05489, PID:49206, PID:640960, PID:1247764, SP:Q05489, PID:49206, PID:640960, PID:1247764, SP:Q05489, PID:49206, PID:640960, and PID:1247764; identified by sequence similarity' YP_020815.2 'similar to SP:P38119, and PID:466983; identified by sequence similarity' YP_052643.1 'similar to SP:P05845, GB:X17693, PID:581281, SP:P05845, GB:X17693, and PID:581281; identified by sequence similarity' YP_020819.1 similar to SP:P21885; identified by sequence similarity YP_020820.1 involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links YP_022676.1 'similar to GB:L19437, SP:P37837, PID:1480787, PID:2073541, PID:2318011, GB:L19437, SP:P37837, PID:1480787, PID:2073541, and PID:2318011; identified by sequence similarity' YP_020826.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_020827.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA YP_020828.1 'similar to SP:P21882, GB:M22632, SP:P00505, and PID:179104; identified by sequence similarity' YP_020829.1 'similar to SP:P21881, and SP:P21881; identified by sequence similarity' YP_020830.1 identified by match to TIGR protein family HMM TIGR01732 YP_020831.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_020832.1 identified by match to TIGR protein family HMM TIGR01681 YP_020833.1 'similar to SP:P01077, PID:217028, SP:P01077, and PID:217028; identified by sequence similarity' YP_020834.1 'similar to GB:M36693, GB:X07834, GB:X14322, GB:X15132, GB:X59445, GB:X65965, GB:Y00472, GB:L34157, GB:A12178, GB:A12179, GB:Y00985, GB:S77127, SP:P04179, PID:1129044, PID:1330301, PID:1330302, PID:1330303, PID:1335215, PID:1906310, PID:338286, PID:34707, PID:34709, PID:34711, PID:34712, PID:34795, PID:36518, PID:36537, GB:M36693, GB:X07834, GB:X14322, GB:X15132, GB:X59445, GB:X65965, GB:Y00472, GB:L34157, GB:A12178, GB:A12179, GB:Y00985, GB:S77127, SP:P04179, PID:1129044, PID:1330301, PID:1330302, PID:1330303, PID:1335215, PID:1906310, PID:338286, PID:34707, PID:34709, PID:34711, PID:34712, PID:34795, PID:36518, and PID:36537; identified by sequence similarity' YP_020835.1 identified by match to PFAM protein family HMM PF02737 YP_052644.1 identified by match to PFAM protein family HMM PF03595 YP_020837.1 'similar to SP:P14877, GB:X06083, and PID:43369; identified by sequence similarity' YP_020838.1 identified by match to TIGR protein family HMM TIGR01853 YP_020839.1 'similar to SP:P08522, and PID:47862; identified by sequence similarity' YP_020840.1 'similar to SP:P08522, and PID:47862; identified by sequence similarity' YP_020841.1 'similar to SP:P08522, PID:47862, SP:P08522, and PID:47862; identified by sequence similarity' YP_020842.1 'similar to SP:P08522, PID:47862, SP:P08522, and PID:47862; identified by sequence similarity' YP_020844.2 'similar to SP:P08522, PID:47862, SP:P08522, and PID:47862; identified by sequence similarity' YP_020845.1 similar to GP:3077611; identified by sequence similarity YP_020847.1 'similar to GP:15023166, SP:P09150, GB:M10743, PID:147467, PID:147470, PID:537088, GB:U00096, and PID:1790694; identified by sequence similarity' YP_020848.2 identified by match to TIGR protein family HMM TIGR01832 YP_020849.2 'similar to SP:P09150, GB:M10743, PID:147467, PID:147470, PID:537088, GB:U00096, PID:1790694, SP:P09150, GB:M10743, PID:147467, PID:147470, PID:537088, GB:U00096, and PID:1790694; identified by sequence similarity' YP_020850.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_020851.1 identified by match to PFAM protein family HMM PF02541 YP_020852.1 'similar to GB:M19364, SP:P07316, PID:181099, PID:181118, GB:M19364, SP:P07316, PID:181099, and PID:181118; identified by sequence similarity' YP_020853.1 'similar to GB:X54162, SP:P29536, and PID:28969; identified by sequence similarity' YP_020856.1 identified by match to TIGR protein family HMM TIGR01592 YP_020858.2 similar to GP:1856977; identified by sequence similarity YP_020859.1 'similar to GP:15023394, and GP:15023394; identified by sequence similarity' YP_020860.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_020861.1 'similar to SP:P12669, GB:J02971, GB:J03478, GB:X12706, GB:X04688, GB:X12705, SP:P05113, PID:288310, PID:29393, PID:33836, PID:386822, and PID:386823; identified by sequence similarity' YP_020862.1 similar to SP:P12667; identified by sequence similarity YP_020864.1 'similar to GP:6470219, and GP:6470219; identified by sequence similarity' YP_020865.1 similar to SP:Q08430; identified by sequence similarity YP_020867.1 similar to SP:P16524; identified by sequence similarity YP_020868.1 similar to SP:Q08511; identified by sequence similarity YP_020869.1 similar to GP:15978928; identified by sequence similarity YP_020870.1 similar to GP:15978929; identified by sequence similarity YP_020871.1 'similar to SP:P21111, and GB:U09990; identified by sequence similarity' YP_020872.1 'similar to GB:M73777, and PID:154647; identified by sequence similarity' YP_020873.1 similar to GB:X56537; identified by sequence similarity YP_020874.1 'similar to SP:Q00752, and SP:P80101; identified by sequence similarity' YP_020875.1 similar to GP:10176521; identified by sequence similarity YP_020877.1 'similar to GB:M27602, SP:P07477, SP:P07478, PID:1552517, PID:2275595, PID:521216, PID:521218, GB:M27602, SP:P07477, SP:P07478, PID:1552517, PID:2275595, PID:521216, and PID:521218; identified by sequence similarity' YP_020880.1 similar to GP:18144335; identified by sequence similarity YP_020881.1 identified by match to TIGR protein family HMM TIGR01166 YP_020882.1 'Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis' YP_020883.1 identified by match to TIGR protein family HMM TIGR00586 YP_020887.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_020888.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_020889.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_020890.1 similar to GP:14994468; identified by sequence similarity YP_020891.2 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_020892.1 'similar to GP:14994481, and GP:14994481; identified by sequence similarity' YP_020893.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway YP_020894.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway YP_020895.1 'similar to SP:P13793, GB:D17795, GB:D17796, GB:M19405, PID:150844, PID:456492, PID:456494, PID:456496, and PID:2443396; identified by sequence similarity' YP_020896.1 produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however YP_020897.1 'converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage' YP_020898.1 'converts 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate to 1,2-dihydroxy-3-keto-5-methylthiopentene; involved in methionine salvage' YP_020899.1 'converts methylthioribulose-1-phosphate into 2,3-diketo-5-methylthiopentyl-1-phosphate; involved in methionine salvage' YP_020900.1 'similar to PIR:A59159, SP:P25666, PID:1209298, PID:466756, GB:U00096, and PID:1790048; identified by sequence similarity' YP_020905.1 identified by match to TIGR protein family HMM TIGR00229 YP_020906.1 'similar to SP:P21502, GB:X51662, PID:41810, GB:U00096, PID:1778450, and PID:1786747; identified by sequence similarity' YP_020909.1 similar to SP:P08838; identified by sequence similarity YP_020910.1 similar to GP:12150280; identified by sequence similarity YP_020911.1 'similar to GB:X58377, GB:M57765, SP:P20809, PID:186273, and PID:22953; identified by sequence similarity' YP_020912.1 'similar to GP:2154723, and GP:2154723; identified by sequence similarity' YP_020913.1 similar to GP:15023385; identified by sequence similarity YP_020914.1 identified by match to PFAM protein family HMM PF00392 YP_020915.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate YP_020916.1 identified by match to PFAM protein family HMM PF02612 YP_020917.1 similar to SP:P39695; identified by sequence similarity YP_022679.2 functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer YP_020919.1 functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB YP_020920.1 identified by match to TIGR protein family HMM TIGR01732 YP_020921.1 identified by match to PFAM protein family HMM PF03745 YP_020922.1 'similar to GB:J03071, and PID:183150; identified by sequence similarity' YP_020924.1 similar to SP:P35137; identified by sequence similarity YP_020927.1 'similar to GB:X17679, and PID:46540; identified by sequence similarity' YP_020928.1 identified by match to PFAM protein family HMM PF03323 YP_020931.1 'similar to GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, and PID:485909; identified by sequence similarity' YP_020932.1 'similar to GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, and PID:485909; identified by sequence similarity' YP_020933.1 'similar to GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, and PID:485909; identified by sequence similarity' YP_020934.1 'similar to GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, and PID:485909; identified by sequence similarity' YP_020936.1 identified by match to TIGR protein family HMM TIGR01770 YP_020937.1 'sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.' YP_020938.1 binds to sigma F preventing its association with RNA polymerase during sporulation YP_020939.2 similar to SP:P10727; identified by sequence similarity YP_020940.1 'similar to SP:P38422, and SP:P38422; identified by sequence similarity' YP_020942.1 'similar to SP:P00575, GB:M38287, GB:M38292, GB:M38293, GB:M38304, GB:V00339, GB:V00340, GB:V00341, PID:147718, PID:147722, PID:147725, PID:147728, PID:396326, PID:42818, PID:42821, PID:551832, GB:U00096, PID:1666534, and PID:1790419; identified by sequence similarity' YP_020943.1 'similar to GP:16412269, and GP:16412269; identified by sequence similarity' YP_020944.1 'similar to SP:P00575, GB:M38287, GB:M38292, GB:M38293, GB:M38304, GB:V00339, GB:V00340, GB:V00341, PID:147718, PID:147722, PID:147725, PID:147728, PID:396326, PID:42818, PID:42821, PID:551832, GB:U00096, PID:1666534, and PID:1790419; identified by sequence similarity' YP_020947.1 'similar to GP:10640477, GB:X59871, GB:X59869, GB:X59870, SP:P36402, PID:36788, PID:619882, and PID:619884; identified by sequence similarity' YP_020950.1 identified by match to PFAM protein family HMM PF03379 YP_020951.1 identified by match to PFAM protein family HMM PF01544 YP_020952.1 Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway YP_020953.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_020954.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose YP_020955.1 similar to GP:10173292; identified by sequence similarity YP_020956.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_020958.1 identified by match to PFAM protein family HMM PF01475 YP_020959.1 'similar to GB:M96954, SP:Q01085, PID:189310, GB:M96954, SP:Q01085, and PID:189310; identified by sequence similarity' YP_020961.2 'similar to GB:M31887, SP:P16626, and PID:152502; identified by sequence similarity' YP_020962.1 'similar to GB:M34570, GB:X15882, GB:X15977, GB:M34572, GB:M34573, GB:M34571, PID:179709, PID:179711, PID:179713, and PID:30045; identified by sequence similarity' YP_020964.1 identified by match to PFAM protein family HMM PF02829 YP_020965.2 identified by match to TIGR protein family HMM TIGR01293 YP_020966.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_022685.1 'similar to GB:M34570, GB:X15882, GB:X15977, GB:M34572, GB:M34573, GB:M34571, PID:179709, PID:179711, PID:179713, PID:30045, GB:M34570, GB:X15882, GB:X15977, GB:M34572, GB:M34573, GB:M34571, PID:179709, PID:179711, PID:179713, and PID:30045; identified by sequence similarity' YP_020969.1 'similar to GB:M14753, GB:X16416, GB:U07561, GB:U07563, GB:M14752, GB:M14754, GB:M30833, GB:S69223, SP:P00519, PID:179746, PID:179750, PID:514267, PID:514268, PID:553164, and PID:560759; identified by sequence similarity' YP_020970.1 identified by match to PFAM protein family HMM PF02954 YP_020971.1 'similar to SP:P27000, PID:48242, SP:P27000, and PID:48242; identified by sequence similarity' YP_020972.1 similar to SP:P04028; identified by sequence similarity YP_020973.2 similar to GP:10176351; identified by sequence similarity YP_020974.1 'similar to GP:15025551, and GP:15025551; identified by sequence similarity' YP_020975.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_020976.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, PID:219501, GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_022686.1 'similar to GP:17429935, and GP:17429935; identified by sequence similarity' YP_020977.1 similar to SP:P17618; identified by sequence similarity YP_020978.1 'catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine' YP_020979.1 'bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate' YP_020980.1 'RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not' YP_020982.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine YP_020983.1 'similar to GP:13366138, and GP:13366138; identified by sequence similarity' YP_020984.1 'similar to GP:13366137, and GP:13366137; identified by sequence similarity' YP_020985.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine YP_020986.1 'DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium' YP_020987.1 'catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate' YP_020990.1 similar to SP:P27611; identified by sequence similarity YP_020991.1 'in Escherichia coli this is a periplasmic enzyme while in gram positive organisms it may be anchored at the cell surface; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate' YP_020992.1 similar to GP:16410144; identified by sequence similarity YP_020993.1 'similar to GP:15023772, and GP:15023772; identified by sequence similarity' YP_020994.2 identified by match to PFAM protein family HMM PF03083 YP_020995.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_022688.1 similar to SP:P36839; identified by sequence similarity YP_020998.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_020999.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_021000.1 'catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate' YP_021002.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_021005.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate YP_021006.1 identified by match to PFAM protein family HMM PF03313 YP_021007.1 identified by match to PFAM protein family HMM PF03315 YP_021009.1 member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions YP_021011.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_022689.1 'similar to GP:15100134, and GP:16413137; identified by sequence similarity' YP_021012.1 'similar to SP:P55179, GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_021013.1 'similar to SP:P09454, SP:P19433, GB:X55500, and PID:288287; identified by sequence similarity' YP_021016.1 identified by match to PFAM protein family HMM PF03734 YP_021017.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, PID:219501, GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_021019.1 identified by match to TIGR protein family HMM TIGR01193 YP_021020.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_021021.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, PID:219501, GB:J04088, SP:P11388, and PID:292830; identified by sequence similarity' YP_021022.2 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_021023.1 'similar to GP:15024526, SP:P19196, GB:X53368, GB:Z48169, PID:48574, and PID:793895; identified by sequence similarity' YP_021024.1 identified by match to TIGR protein family HMM TIGR00586 YP_021025.1 identified by match to PFAM protein family HMM PF03773 YP_021026.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA YP_021027.1 'similar to SP:P37941, GB:D10924, GB:X71635, GB:M99293, GB:L01639, GB:L06797, SP:P30991, PID:189314, PID:219869, PID:292517, PID:297100, and PID:414928; identified by sequence similarity' YP_021028.1 'similar to SP:P37940, GB:D13640, SP:P49593, PID:2114221, and PID:286007; identified by sequence similarity' YP_021029.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_021030.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_021031.1 'similar to SP:P13154, GB:L05392, and PID:150422; identified by sequence similarity' YP_021032.1 catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate YP_021033.1 'similar to GB:X14831, GB:J03858, GB:S71326, GB:M76741, GB:M76742, GB:M76743, GB:M76744, GB:D12502, GB:M72238, GB:D90311, GB:D90313, SP:P13688, PID:179435, PID:179437, PID:219499, and PID:219501; identified by sequence similarity' YP_021034.1 'similar to SP:P13295, GB:X15079, PID:48691, PID:49406, SP:P13295, GB:X15079, PID:48691, and PID:49406; identified by sequence similarity' YP_021035.1 'similar to GB:X59960, GB:X52679, GB:M59916, GB:M59917, GB:X52678, GB:M81780, GB:X63600, SP:P17405, PID:179095, PID:28880, PID:402621, PID:553192, PID:556809, PID:825629, PID:972769, and PID:972770; identified by sequence similarity' YP_021036.1 'similar to GB:M31732, GB:U05681, GB:U05822, SP:P20749, PID:179376, PID:533381, PID:553198, GB:M31732, GB:U05681, GB:U05822, SP:P20749, PID:179376, PID:533381, and PID:553198; identified by sequence similarity' YP_021037.1 'similar to GP:16413526, and GP:16413526; identified by sequence similarity' YP_021039.2 identified by match to TIGR protein family HMM TIGR01387 YP_021040.1 similar to GP:1553038; identified by sequence similarity YP_021041.2 'similar to GB:Y00062, GB:M23492, SP:P08575, PID:187013, and PID:34276; identified by sequence similarity' YP_021042.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes YP_021043.2 'similar to GB:M97796, SP:Q02363, PID:184552, and PID:471126; identified by sequence similarity' YP_021044.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_021045.1 'similar to SP:Q08291, GB:K02100, GB:M11235, GB:S65093, GB:D00221, GB:D00222, GB:D00223, GB:D00224, GB:D00225, GB:D00226, GB:D00227, GB:D00228, GB:D00229, GB:D00230, GB:S73640, GB:S65116, GB:D00095, SP:P00480, PID:189407, PID:189409, PID:219959, PID:219961, and PID:35163; identified by sequence similarity' YP_021046.1 catalyzes the bidirectional exonucleolytic cleavage of DNA YP_021047.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_021048.1 'catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate' YP_021049.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_021050.1 identified by match to PFAM protein family HMM PF03780 YP_021051.1 'an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism' YP_021052.1 'composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism' YP_021053.1 similar to SP:P49785; identified by sequence similarity YP_021054.1 identified by match to PFAM protein family HMM PF03954 YP_021055.1 'similar to GB:M33208, GB:M33209, GB:M33210, SP:P09619, and PID:532593; identified by sequence similarity' YP_021056.1 'similar to GB:M33208, GB:M33209, GB:M33210, SP:P09619, and PID:532593; identified by sequence similarity' YP_021057.1 'similar to GB:M33208, GB:M33209, GB:M33210, SP:P09619, and PID:532593; identified by sequence similarity' YP_021058.1 'similar to GB:M33208, GB:M33209, GB:M33210, SP:P09619, and PID:532593; identified by sequence similarity' YP_021059.1 necessary for complete engulfment of forespore YP_021061.3 similar to GP:10175419; identified by sequence similarity YP_021062.1 identified by match to PFAM protein family HMM PF00583 YP_021063.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_021064.1 'similar to GB:X59960, GB:X52679, GB:M59916, GB:M59917, GB:X52678, GB:M81780, GB:X63600, SP:P17405, PID:179095, PID:28880, PID:402621, PID:553192, PID:556809, PID:825629, PID:972769, and PID:972770; identified by sequence similarity' YP_021065.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_021067.2 'similar to GB:M36711, GB:M61156, GB:X77343, SP:P05549, GB:M36711, GB:M61156, GB:X77343, and SP:P05549; identified by sequence similarity' YP_021069.1 'similar to GB:X74862, and PID:510996; identified by sequence similarity' YP_021070.1 involved in manganese homeostasis; activates the transcription of the mntABCD operon YP_021071.1 'similar to GB:M77829, GB:S73482, SP:P29972, PID:1314304, PID:1314306, and PID:180501; identified by sequence similarity' YP_021073.1 'similar to GB:M36711, GB:M61156, GB:X77343, and SP:P05549; identified by sequence similarity' YP_021074.1 'similar to GB:M36711, GB:M61156, GB:X77343, and SP:P05549; identified by sequence similarity' YP_022692.1 'similar to GP:2633758, SP:P14034, and PID:44759; identified by sequence similarity' YP_021077.1 'similar to GP:16411558, and GP:16411558; identified by sequence similarity' YP_021078.1 'similar to GB:U07663, GB:U07664, SP:P50219, and PID:507425; identified by sequence similarity' YP_021079.1 'similar to SP:P30743, GB:U07663, GB:U07664, SP:P50219, and PID:507425; identified by sequence similarity' YP_021082.2 identified by match to PFAM protein family HMM PF03379 YP_021084.1 similar to GP:18144103; identified by sequence similarity YP_021087.1 identified by match to TIGR protein family HMM TIGR01187 YP_021088.1 identified by match to PFAM protein family HMM PF00392 YP_021090.2 similar to GP:18893371; identified by sequence similarity YP_021091.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_021092.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_021093.1 'catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein' YP_021094.1 'similar to SP:P23852, GB:M36711, GB:M61156, GB:X77343, and SP:P05549; identified by sequence similarity' YP_021100.1 'similar to SP:P33357, PID:405857, GB:U00096, PID:1788446, SP:P33357, PID:405857, GB:U00096, and PID:1788446; identified by sequence similarity' YP_021101.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_021102.1 similar to GP:17429837; identified by sequence similarity YP_021104.1 similar to GP:16413852; identified by sequence similarity YP_021106.1 similar to GP:16410761; identified by sequence similarity YP_021107.1 similar to GP:16413855; identified by sequence similarity YP_021108.1 'similar to GB:M76559, SP:P54289, and PID:179762; identified by sequence similarity' YP_021109.1 'similar to GB:X15606, SP:P13598, PID:32624, and PID:386792; identified by sequence similarity' YP_021110.1 identified by match to PFAM protein family HMM PF03551 YP_021111.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, PID:929612, GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S4' YP_021112.1 'similar to GB:M14753, GB:X16416, GB:U07561, GB:U07563, GB:M14752, GB:M14754, GB:M30833, GB:S69223, SP:P00519, PID:179746, PID:179750, PID:514267, PID:514268, PID:553164, and PID:560759; identified by sequence similarity' YP_021116.1 similar to GP:6606253; identified by sequence similarity YP_021120.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_021121.2 similar to SP:P13009; identified by sequence similarity YP_021122.1 'catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions' YP_021123.1 catalyzes the formation of cysteine from cystathionine; in B. subtilis also has O-acetylhomoserine thiolyase activity YP_021124.1 catalyzes the formation of L-homocysteine from cystathionine YP_021126.2 'similar to GP:4894353, and GP:4894353; identified by sequence similarity' YP_021127.1 'similar to GP:17132452, and GP:17132452; identified by sequence similarity' YP_021129.1 identified by match to PFAM protein family HMM PF00753 YP_021130.2 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, PID:929612, GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S4' YP_021131.1 'similar to GB:M24856, SP:P14175, GB:X52694, PID:147373, PID:42505, GB:U00096, PID:1789032, and PID:1800065; identified by sequence similarity' YP_021132.2 'similar to GB:L29059, SP:P38583, PID:456412, GB:L29059, SP:P38583, and PID:456412; identified by sequence similarity' YP_021133.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_021134.1 'in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif' YP_021135.1 similar to GP:15026036; identified by sequence similarity YP_021136.1 'similar to GP:10175612, and GP:10175612; identified by sequence similarity' YP_021137.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_021138.1 identified by match to PFAM protein family HMM PF03595 YP_021139.1 identified by match to TIGR protein family HMM TIGR01726 YP_021140.1 identified by match to PFAM protein family HMM PF01449 YP_021141.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_021142.1 identified by match to PFAM protein family HMM PF03209 YP_021143.1 'similar to GB:J05158, SP:P22792, PID:179936, GB:J05392, GB:X60306, GB:Z48199, SP:P18827, PID:338634, PID:36652, and PID:666052; identified by sequence similarity' YP_021144.1 'similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05' YP_021146.1 'catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis' YP_021147.1 'similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, and PID:553171; identified by sequence similarity' YP_021148.1 'similar to GP:16413957, and GP:16413957; identified by sequence similarity' YP_021149.1 identified by match to TIGR protein family HMM TIGR01842 YP_021150.1 'similar to GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05230, PID:181942, PID:182559, PID:292022, PID:292027, PID:32436, PID:386768, PID:396164, PID:396166, PID:553170, PID:553171, GB:S67291, GB:S67292, GB:S67294, GB:X51943, GB:M13361, GB:M60515, GB:M60516, GB:M60518, GB:M60519, GB:M60520, GB:M60521, GB:X59065, GB:X65778, GB:X59612, SP:P05' YP_021151.1 'similar to GB:L34355, GB:L34355, GB:L35853, GB:L46810, GB:U08895, PID:511587, PID:533184, PID:557731, PID:950329, GB:L34355, GB:L34355, GB:L35853, GB:L46810, GB:U08895, PID:511587, PID:533184, PID:557731, and PID:950329; identified by sequence similarity' YP_021152.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues YP_021153.1 'similar to GB:L34355, GB:L34355, GB:L35853, GB:L46810, GB:U08895, PID:511587, PID:533184, PID:557731, and PID:950329; identified by sequence similarity' YP_021156.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_021157.1 identified by match to PFAM protein family HMM PF01784 YP_021158.1 'similar to GP:16413963, and GP:16413963; identified by sequence similarity' YP_021159.1 identified by match to PFAM protein family HMM PF00034 YP_021160.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium YP_021161.1 synthesizes RNA primers at the replication forks YP_022693.1 'similar to GB:L34355, GB:L34355, GB:L35853, GB:L46810, GB:U08895, PID:511587, PID:533184, PID:557731, PID:950329, GB:L34355, GB:L34355, GB:L35853, GB:L46810, GB:U08895, PID:511587, PID:533184, PID:557731, and PID:950329; identified by sequence similarity' YP_021167.1 identified by match to PFAM protein family HMM PF00392 YP_021168.2 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA YP_021169.1 'similar to GP:10173984, and GP:10173984; identified by sequence similarity' YP_021170.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_021171.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis YP_021172.1 'similar to GP:16410893, and SP:P19638; identified by sequence similarity' YP_021173.1 'similar to SP:P07779, GB:X06452, PID:38742, SP:P07779, GB:X06452, and PID:38742; identified by sequence similarity' YP_021174.1 identified by match to PFAM protein family HMM PF03023 YP_021175.1 similar to GP:3947511; identified by sequence similarity YP_021176.1 similar to GP:3947510; identified by sequence similarity YP_021179.1 'similar to GP:10173971, and GP:10173971; identified by sequence similarity' YP_021180.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_021181.1 'similar to GB:X59739, GB:X59738, GB:X59740, SP:P08048, SP:P17010, PID:340434, PID:38020, PID:38022, PID:38024, GB:X59739, GB:X59738, GB:X59740, SP:P08048, SP:P17010, PID:340434, PID:38020, PID:38022, and PID:38024; identified by sequence similarity' YP_021182.2 'in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase' YP_021183.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_021184.1 'chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion' YP_021185.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_021186.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_021187.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_021188.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_021189.1 'similar to GB:M27602, SP:P07477, SP:P07478, PID:1552517, PID:2275595, PID:521216, PID:521218, GB:M27602, SP:P07477, SP:P07478, PID:1552517, PID:2275595, PID:521216, and PID:521218; identified by sequence similarity' YP_021190.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_021191.1 'similar to GB:X16983, SP:P13612, PID:33946, PID:903744, GB:X16983, SP:P13612, PID:33946, and PID:903744; identified by sequence similarity' YP_021192.1 'Initiates the rapid degradation of small, acid-soluble proteins during spore germination' YP_021193.3 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_021194.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA YP_021196.1 identified by match to PFAM protein family HMM PF04138 YP_022694.1 'similar to GB:M14624, and PID:177203; identified by sequence similarity' YP_021199.1 identified by match to PFAM protein family HMM PF00633 YP_021200.1 may be involved in regulation of competence genes YP_021201.1 identified by match to PFAM protein family HMM PF03848 YP_021202.1 similar to GP:16410915; identified by sequence similarity YP_021203.1 'similar to GB:U11814, GB:M80634, SP:P21802, SP:Q01742, PID:1129107, PID:182567, PID:186741, PID:29432, PID:530802, GB:U11814, GB:M80634, SP:P21802, SP:Q01742, PID:1129107, PID:182567, PID:186741, PID:29432, and PID:530802; identified by sequence similarity' YP_022695.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria YP_021205.1 'similar to GB:U11814, GB:M80634, SP:P21802, SP:Q01742, PID:1129107, PID:182567, PID:186741, PID:29432, PID:530802, GB:U11814, GB:M80634, SP:P21802, SP:Q01742, PID:1129107, PID:182567, PID:186741, PID:29432, and PID:530802; identified by sequence similarity' YP_021206.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_021207.2 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis YP_021208.2 'similar to GB:U11814, GB:M80634, SP:P21802, SP:Q01742, PID:1129107, PID:182567, PID:186741, PID:29432, PID:530802, GB:U11814, GB:M80634, SP:P21802, SP:Q01742, PID:1129107, PID:182567, PID:186741, PID:29432, and PID:530802; identified by sequence similarity' YP_021210.2 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine YP_021211.1 sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment YP_021215.1 'in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif' YP_021216.1 similar to GP:11276055; identified by sequence similarity YP_021217.1 similar to GP:15426419; identified by sequence similarity YP_021218.1 similar to GP:15145444; identified by sequence similarity YP_021219.1 'similar to GP:11276057, and SP:P19405; identified by sequence similarity' YP_021221.1 identified by match to PFAM protein family HMM PF00583 YP_021222.1 identified by match to PFAM protein family HMM PF03096 YP_021223.1 identified by match to PFAM protein family HMM PF04173 YP_021225.1 'similar to SP:P05822, GB:U00096, PID:1657499, PID:1657567, PID:1736794, PID:1736806, PID:1778455, PID:1786490, PID:1786570, PID:1786753, PID:1787263, PID:1788405, GB:U00096, PID:1657499, PID:1657567, PID:1736794, PID:1736806, PID:1778455, PID:1786490, PID:1786570, PID:1786753, PID:1787263, PID:1788405, GB:U00096, PID:1657499, PID:1657567, PID:1736794, PID:1736806, PID:1778455, PID:1786490, PID:1786570, PID:1786753, PID:1787263, PID:1788405, GB:U00096, PID:1657499, PID:1657567, PID:1736794, PID:1736806, PID:1778455, PID:1786490, PID:1786570, PID:1786753, PID:1787263, PID:1788405, GB:U00096, PID:1657499, PID:1657567, PID:1736794, PID:1736806, PID:1778455, PID:1786490, PID:1786570, PID:1786753, PID:1787263, and PID:1788405; identified by sequence similarity' YP_021229.1 'similar to SP:P29141, GB:X17360, GB:X04706, SP:P09016, PID:296652, PID:32367, PID:576592, and PID:939889; identified by sequence similarity' YP_021230.1 phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_021231.1 'similar to GP:15623279, and SP:P43335; identified by sequence similarity' YP_021234.1 identified by match to PFAM protein family HMM PF04173 YP_021235.1 identified by match to PFAM protein family HMM PF01381 YP_021236.1 'similar to SP:P29051, GB:X63837, and PID:49046; identified by sequence similarity' YP_021237.1 similar to GP:17135096; identified by sequence similarity YP_021239.1 similar to GP:17135590; identified by sequence similarity YP_021240.1 similar to GP:13276687; identified by sequence similarity YP_021241.1 similar to GP:16411917; identified by sequence similarity YP_021242.1 similar to GP:16411918; identified by sequence similarity YP_021243.1 'similar to GB:Z19002, GB:S60093, SP:Q05516, and PID:38518; identified by sequence similarity' YP_021245.1 'similar to GP:16411070, and SP:Q24803; identified by sequence similarity' YP_021246.1 catalyzes the formation of L-homocysteine from cystathionine YP_021247.1 'similar to GP:9858119, GP:9858119, and SP:P80094; identified by sequence similarity' YP_021248.2 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine YP_021249.1 'similar to SP:P80094, and SP:P80094; identified by sequence similarity' YP_021252.1 identified by match to PFAM protein family HMM PF03717 YP_021253.1 'necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus' YP_021254.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor YP_021255.1 identified by match to PFAM protein family HMM PF01136 YP_021256.2 similar to SP:P21469; identified by sequence similarity YP_021258.1 identified by match to PFAM protein family HMM PF01135 YP_021259.1 'similar to SP:P21469, and SP:P21469; identified by sequence similarity' YP_021260.1 'similar to SP:P21469, and SP:P21469; identified by sequence similarity' YP_021261.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_021264.1 'Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA' YP_021267.1 'similar to GP:16410311, SP:P35029, GB:X59038, and PID:47504; identified by sequence similarity' YP_021271.2 'similar to SP:Q08022, and PID:312711; identified by sequence similarity' YP_021272.1 'similar to SP:Q08022, PID:312711, SP:Q08022, and PID:312711; identified by sequence similarity' YP_021273.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_021274.1 identified by match to TIGR protein family HMM TIGR01328 YP_021275.1 identified by match to TIGR protein family HMM TIGR01784 YP_021276.1 identified by match to TIGR protein family HMM TIGR01618 YP_021277.1 'similar to GB:M95923, and PID:553159; identified by sequence similarity' YP_021278.1 identified by match to PFAM protein family HMM PF04128 YP_021279.1 'catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes' YP_021280.1 'catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG' YP_021281.2 similar to GP:22777705; identified by sequence similarity YP_021283.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_021284.1 similar to GP:2739435; identified by sequence similarity YP_021285.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_021286.1 'similar to SP:P08205, GB:Y00492, PID:581038, PID:882710, GB:U00096, PID:1789181, SP:P08205, GB:Y00492, PID:581038, PID:882710, GB:U00096, and PID:1789181; identified by sequence similarity' YP_021287.1 'similar to GP:10173854, and GP:10173854; identified by sequence similarity' YP_021288.1 'part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF' YP_021289.1 'similar to SP:P07114, GB:S96966, GB:X04830, PID:42533, SP:P07114, GB:S96966, GB:X04830, and PID:42533; identified by sequence similarity' YP_021290.1 identified by match to PFAM protein family HMM PF03023 YP_021291.1 identified by match to PFAM protein family HMM PF04239 YP_021292.1 'similar to SP:P24011, GB:X54140, PID:39869, PID:2339992, GB:AL009126, SP:P24011, GB:X54140, PID:39869, PID:2339992, and GB:AL009126; identified by sequence similarity' YP_021293.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex YP_021294.1 'Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)' YP_021295.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_021297.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_021298.2 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_021299.1 'similar to SP:P21324, and PID:145151; identified by sequence similarity' YP_021300.1 'similar to SP:P37134, GB:X62116, PID:580779, SP:P37134, GB:X62116, and PID:580779; identified by sequence similarity' YP_021303.1 identified by match to PFAM protein family HMM PF04297 YP_021305.1 'similar to GB:M14753, GB:X16416, GB:U07561, GB:U07563, GB:M14752, GB:M14754, GB:M30833, GB:S69223, SP:P00519, PID:179746, PID:179750, PID:514267, PID:514268, PID:553164, and PID:560759; identified by sequence similarity' YP_021306.1 'similar to GP:10173837, and GP:10173837; identified by sequence similarity' YP_021307.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_021308.1 'catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide' YP_021309.1 catalyzes the formation of oxaloacetate from L-aspartate YP_052646.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis YP_021311.1 'similar to GP:16414643, and GP:16414643; identified by sequence similarity' YP_021312.1 'similar to GP:16411530, and GP:16411530; identified by sequence similarity' YP_021313.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis YP_021314.1 'similar to GP:15024467, SP:P35029, GB:X59038, and PID:47504; identified by sequence similarity' YP_021315.1 'similar to SP:P35029, GB:X59038, and PID:47504; identified by sequence similarity' YP_021316.1 'similar to SP:P35029, GB:X59038, and PID:47504; identified by sequence similarity' YP_021319.1 'similar to GP:1945655, SP:P35029, GB:X59038, and PID:47504; identified by sequence similarity' YP_021320.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_021321.1 'similar to GB:X67055, GB:X14690, PID:1628399, PID:288563, and PID:35465; identified by sequence similarity' YP_021322.1 involved in the peptidyltransferase reaction during translation YP_021324.1 identified by match to PFAM protein family HMM PF00829 YP_021325.1 similar to GP:10175636; identified by sequence similarity YP_021326.1 identified by match to PFAM protein family HMM PF02163 YP_021327.1 'similar to GB:L15702, GB:J00126, GB:J00185, GB:K01566, GB:X00284, GB:X72875, GB:M15082, SP:P00751, PID:2347133, PID:291922, PID:297569, PID:553534, PID:553535, PID:553536, and PID:758090; identified by sequence similarity' YP_021328.1 identified by match to TIGR protein family HMM TIGR01287 YP_021329.1 blocks the formation of polar Z-ring septums YP_021330.1 similar to GP:10175651; identified by sequence similarity YP_021331.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_021332.1 functions in MreBCD complex in some organisms YP_021333.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase YP_021335.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_021336.1 'similar to GB:X53002, GB:M35011, SP:P18084, PID:186505, PID:306894, and PID:33953; identified by sequence similarity' YP_021337.1 'similar to SP:Q05865, GB:X16468, GB:J00116, GB:X58709, GB:M27468, GB:X06268, GB:M63281, GB:X13783, GB:X16711, GB:X03320, GB:X02378, GB:X02376, GB:X02375, GB:X02372, GB:X02374, GB:X57010, GB:S76829, GB:U15195, GB:X02371, SP:P02458, PID:1335019, PID:1335020, PID:1335022, PID:1335023, PID:1335024, PID:180396, PID:180811, PID:29516, PID:30041, PID:30097, PID:394700, PID:529398, PID:557054, PID:562268, PID:575948, PID:673389, PID:825645, and PID:930050; identified by sequence similarity' YP_021338.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_021340.1 'similar to GB:Y00764, GB:M36647, SP:P07919, PID:188565, and PID:32101; identified by sequence similarity' YP_021341.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_021342.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_021343.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis YP_021344.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_021345.1 'similar to GP:3172392, and SP:P16645; identified by sequence similarity' YP_021346.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_021347.1 'similar to GP:16414815, SP:P37621, PID:912459, GB:U00096, and PID:1789884; identified by sequence similarity' YP_021348.1 'similar to SP:O68390, SP:P37621, PID:912459, GB:U00096, and PID:1789884; identified by sequence similarity' YP_021349.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_021350.1 similar to SP:P37945; identified by sequence similarity YP_021351.1 'similar to SP:P42425, GB:M19364, SP:P07316, PID:181099, and PID:181118; identified by sequence similarity' YP_021352.1 binds and unfolds substrates as part of the ClpXP protease YP_021353.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_021359.1 'similar to SP:P16574, GB:X58355, PID:39353, SP:P16574, GB:X58355, and PID:39353; identified by sequence similarity' YP_021362.1 'similar to SP:P18177, GB:X53138, PID:40443, PID:40446, PID:1770133, SP:P18177, GB:X53138, PID:40443, PID:40446, and PID:1770133; identified by sequence similarity' YP_021363.1 hydrolyzes non-standard nucleotides such as xanthine and inosine YP_021364.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_021365.1 'similar to GB:J03071, GB:J00289, GB:K02401, GB:J00118, GB:V00573, GB:M15894, SP:P01241, SP:P01243, PID:181121, PID:181125, PID:181127, PID:183151, PID:183153, PID:190034, PID:35507, PID:36544, PID:387024, PID:490144, and PID:512406; identified by sequence similarity' YP_021366.1 'converts L-glutamate to D-glutamate, a component of peptidoglycan' YP_021367.1 'similar to GP:2462085, and GP:2462085; identified by sequence similarity' YP_021368.1 identified by match to TIGR protein family HMM TIGR01382 YP_021369.1 identified by match to PFAM protein family HMM PF00440 YP_021370.1 'similar to GP:17742748, and GP:17742748; identified by sequence similarity' YP_021372.1 'similar to GP:2924355, and SP:P11470; identified by sequence similarity' YP_022698.1 'similar to SP:P77328, GB:X74328, SP:P34972, and PID:407807; identified by sequence similarity' YP_021375.1 'similar to GP:16412936, and SP:P37511; identified by sequence similarity' YP_021376.1 metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain YP_021377.2 metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain YP_021378.1 identified by match to PFAM protein family HMM PF00496 YP_021379.1 identified by match to PFAM protein family HMM PF03006 YP_021380.1 'similar to GP:10172641, and GP:10172641; identified by sequence similarity' YP_021381.1 'similar to GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_021382.1 'similar to GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity' YP_021384.1 identified by match to PFAM protein family HMM PF00165 YP_021387.1 'similar to GP:16411973, and GP:16411973; identified by sequence similarity' YP_021388.1 identified by match to PFAM protein family HMM PF01381 YP_021389.1 identified by match to PFAM protein family HMM PF03772 YP_021390.1 identified by match to PFAM protein family HMM PF04020 YP_021391.1 identified by match to PFAM protein family HMM PF02082 YP_021392.1 similar to SP:P80102; identified by sequence similarity YP_021393.2 'similar to GP:3688825, and GP:3688825; identified by sequence similarity' YP_021394.1 similar to GP:1944618; identified by sequence similarity YP_021398.1 With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. YP_021399.1 similar to GP:2529473; identified by sequence similarity YP_021400.1 identified by match to PFAM protein family HMM PF03061 YP_021401.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_021402.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_021403.1 similar to SP:P08064; identified by sequence similarity YP_021404.1 'similar to GB:M83773, GB:X78121, SP:P24386, PID:339023, PID:36747, PID:460795, GB:M83773, GB:X78121, SP:P24386, PID:339023, PID:36747, and PID:460795; identified by sequence similarity' YP_021405.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_021406.1 similar to SP:P14949; identified by sequence similarity YP_021407.1 'similar to SP:P29780, GB:X62567, and PID:49011; identified by sequence similarity' YP_021408.1 'similar to SP:P29780, GB:X62567, and PID:49011; identified by sequence similarity' YP_021409.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_021410.1 'similar to GP:1770039, SP:P07324, and PID:40563; identified by sequence similarity' YP_021411.1 activates fatty acids by binding to coenzyme A YP_021412.1 identified by match to PFAM protein family HMM PF03609 YP_021414.1 identified by match to PFAM protein family HMM PF03032 YP_021415.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome YP_021416.1 'similar to SP:P15484, SP:P15485, SP:P15486, SP:P15487, PID:41157, PID:41158, PID:41159, PID:41160, SP:P15484, SP:P15485, SP:P15486, SP:P15487, PID:41157, PID:41158, PID:41159, and PID:41160; identified by sequence similarity' YP_021418.1 similar to GP:10173431; identified by sequence similarity YP_021419.1 similar to GP:16409990; identified by sequence similarity YP_021420.1 similar to GP:10173431; identified by sequence similarity YP_021421.1 'similar to GP:10173432, and SP:P42332; identified by sequence similarity' YP_021422.2 similar to GP:10173433; identified by sequence similarity YP_021423.1 identified by match to PFAM protein family HMM PF00486 YP_021426.1 'similar to GB:D11428, GB:M94048, GB:L03203, GB:X65968, GB:S61788, SP:Q01453, PID:182985, PID:190131, PID:220010, and PID:31653; identified by sequence similarity' YP_021427.1 identified by match to PFAM protein family HMM PF03155 YP_021428.1 iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source YP_021430.1 'similar to GB:M15841, SP:P08579, and PID:340105; identified by sequence similarity' YP_021431.2 'similar to GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_022700.1 'similar to GB:Z19002, GB:S60093, SP:Q05516, and PID:38518; identified by sequence similarity' YP_021436.1 identified by match to TIGR protein family HMM TIGR01167 YP_021437.1 'similar to SP:P13954, GB:Y07536, PID:46552, and PID:46749; identified by sequence similarity' YP_021440.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange YP_021441.1 'similar to SP:P37279, PID:435125, SP:P37279, and PID:435125; identified by sequence similarity' YP_021442.1 identified by match to PFAM protein family HMM PF02674 YP_021443.1 'similar to SP:P37279, PID:435125, SP:P37279, and PID:435125; identified by sequence similarity' YP_021444.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_022702.1 'similar to GP:4894289, and GP:20520174; identified by sequence similarity' YP_021445.1 'similar to SP:P05430, GB:L19963, GB:J03029, GB:L19960, GB:L19961, GB:X54025, and PID:309599; identified by sequence similarity' YP_021447.1 'catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA' YP_021448.1 'catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily' YP_021449.1 'catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily' YP_021450.1 identified by match to TIGR protein family HMM TIGR00186 YP_021451.1 'similar to SP:P07883, PID:581613, SP:P07883, and PID:581613; identified by sequence similarity' YP_021452.1 identified by match to PFAM protein family HMM PF01966 YP_021453.1 similar to GP:16411540; identified by sequence similarity YP_021454.2 identified by match to PFAM protein family HMM PF02517 YP_021455.1 similar to GP:17132551; identified by sequence similarity YP_021457.1 identified by match to TIGR protein family HMM TIGR01770 YP_021459.1 identified by match to TIGR protein family HMM TIGR00998 YP_021460.1 identified by match to PFAM protein family HMM PF00440 YP_021461.1 'similar to GP:10175754, SP:P11866, GB:X14430, GB:X16445, PID:581237, PID:581238, PID:606060, GB:U00096, and PID:1789507; identified by sequence similarity' YP_021462.1 'similar to GP:10175755, and GP:10175755; identified by sequence similarity' YP_021463.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_021464.1 similar to SP:P55874; identified by sequence similarity YP_021465.2 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_021466.1 'catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)' YP_021467.2 'similar to GB:J05243, GB:M18627, GB:M19725, GB:M24773, GB:X86901, GB:U26396, SP:Q13813, PID:178426, PID:179106, PID:1805280, PID:537331, PID:829111, PID:836669, GB:J05243, GB:M18627, GB:M19725, GB:M24773, GB:X86901, GB:U26396, SP:Q13813, PID:178426, PID:179106, PID:1805280, PID:537331, PID:829111, and PID:836669; identified by sequence similarity' YP_021468.1 Primosomal protein that may act to load helicase DnaC during DNA replication YP_021470.2 identified by match to PFAM protein family HMM PF03477 YP_021471.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_021472.1 NADP-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during gluconeogenesis YP_021473.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis YP_021474.1 identified by match to PFAM protein family HMM PF04070 YP_021475.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_021476.2 'has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair' YP_021477.1 'similar to GB:M25532, SP:P16562, PID:1262817, and PID:339883; identified by sequence similarity' YP_021478.1 'similar to GB:M18391, GB:Z27409, SP:P21709, PID:339717, and PID:482917; identified by sequence similarity' YP_021480.1 identified by match to PFAM protein family HMM PF01575 YP_021481.1 Catalyzes the reversible oxidation of malate to oxaloacetate YP_021482.2 Converts isocitrate to alpha ketoglutarate YP_021483.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate YP_021484.1 'similar to GP:10175783, and GP:10175783; identified by sequence similarity' YP_021485.1 identified by match to PFAM protein family HMM PF03594 YP_021486.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein YP_021487.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_021488.1 'catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis' YP_021489.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_021490.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits YP_021491.2 similar to GP:10175789; identified by sequence similarity YP_021492.1 'similar to SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, and PID:1314251; identified by sequence similarity' YP_021493.1 catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria. YP_021495.1 'similar to SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, PID:1314251, SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, and PID:1314251; identified by sequence similarity' YP_021496.1 'similar to SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, and PID:1314251; identified by sequence similarity' YP_021498.1 'similar to SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, PID:1314251, SP:P33553, GB:Z12295, PID:1122400, PID:41062, PID:847971, and PID:1314251; identified by sequence similarity' YP_021501.1 identified by match to PFAM protein family HMM PF03061 YP_021503.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins YP_021504.1 'similar to SP:P46545, SP:P14034, and PID:44759; identified by sequence similarity' YP_021505.1 'similar to SP:P08656, and PID:459906; identified by sequence similarity' YP_021507.1 'similar to GP:16410723, and GP:16410723; identified by sequence similarity' YP_022705.1 'similar to GB:X04790, GB:M13829, GB:L24038, SP:P07557, SP:P10398, PID:1340152, PID:1405977, PID:387023, and PID:780127; identified by sequence similarity' YP_021508.1 'similar to GP:15026458, and GP:15026458; identified by sequence similarity' YP_021510.1 'similar to SP:P25468, GB:X55636, and PID:47870; identified by sequence similarity' YP_021511.2 'similar to SP:P14090, GB:M29707, GB:X57858, PID:144420, PID:580980, SP:P14090, GB:M29707, GB:X57858, PID:144420, and PID:580980; identified by sequence similarity' YP_021513.2 'similar to GP:4894256, and SP:Q57720; identified by sequence similarity' YP_021515.1 'similar to GB:X60036, GB:X77337, and SP:Q00325; identified by sequence similarity' YP_021516.2 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_021517.1 similar to GP:16414102; identified by sequence similarity YP_021521.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_021522.1 'catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming' YP_021527.1 identified by match to PFAM protein family HMM PF02588 YP_021531.1 'similar to GP:17131105, and GP:17131105; identified by sequence similarity' YP_021532.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_021533.1 'similar to GB:M94151, SP:P26232, PID:179924, PID:179925, GB:M94151, SP:P26232, PID:179924, and PID:179925; identified by sequence similarity' YP_021534.2 similar to SP:P37901; identified by sequence similarity YP_021537.1 catalyzes the phosphorylation of NAD to NADP YP_021538.1 identified by match to PFAM protein family HMM PF03118 YP_021540.2 'similar to SP:P36242, and PID:402165; identified by sequence similarity' YP_021541.1 'similar to GB:M84720, GB:D12775, GB:M84721, GB:M84722, SP:Q01432, PID:1002662, PID:1002663, and PID:553179; identified by sequence similarity' YP_021542.2 Required for the synthesis of the thiazole moiety YP_021543.1 identified by match to TIGR protein family HMM TIGR01788 YP_021544.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation YP_021546.1 'similar to GP:16411189, and SP:P20668; identified by sequence similarity' YP_021547.1 'similar to SP:O07086, and SP:P32820; identified by sequence similarity' YP_021550.1 identified by match to PFAM protein family HMM PF01590 YP_021551.1 catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine YP_021552.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_022707.1 'similar to SP:P19196, GB:X53368, GB:Z48169, PID:48574, PID:793895, SP:P19196, GB:X53368, GB:Z48169, PID:48574, and PID:793895; identified by sequence similarity' YP_021554.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_021556.1 similar to GP:5531433; identified by sequence similarity YP_021558.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_021559.2 identified by match to PFAM protein family HMM PF00583 YP_021560.1 'similar to GB:X64707, SP:P26373, and PID:29383; identified by sequence similarity' YP_021561.1 identified by match to PFAM protein family HMM PF00850 YP_021563.2 'similar to GP:15023165, and GP:15023165; identified by sequence similarity' YP_021564.1 'similar to GP:15023161, and GP:15023161; identified by sequence similarity' YP_021565.1 identified by match to PFAM protein family HMM PF00023 YP_021566.1 similar to GP:15980053; identified by sequence similarity YP_021567.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_021572.1 'similar to GB:Z18951, SP:Q03135, and PID:38516; identified by sequence similarity' YP_052648.1 'similar to SP:P37063, GB:X72001, and GB:X73296; identified by sequence similarity' YP_021575.1 'similar to GB:L16896, GB:M20677, SP:P10074, PID:1177229, PID:1177230, PID:292935, GB:L16896, GB:M20677, SP:P10074, PID:1177229, PID:1177230, and PID:292935; identified by sequence similarity' YP_052649.1 similar to SP:Q9X4A7; identified by sequence similarity YP_021583.1 similar to SP:P13857; identified by sequence similarity YP_021584.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_021585.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_021586.1 identified by match to PFAM protein family HMM PF01580 YP_021588.1 'similar to SP:P05528, GB:M24253, GB:X07875, PID:41981, and PID:551887; identified by sequence similarity' YP_021589.1 'similar to SP:P05528, GB:M24253, GB:X07875, PID:41981, PID:551887, SP:P05528, GB:M24253, GB:X07875, PID:41981, and PID:551887; identified by sequence similarity' YP_021590.1 similar to SP:O97680; identified by sequence similarity YP_021591.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog YP_021592.1 'similar to GP:10175880, and SP:Q48677; identified by sequence similarity' YP_021594.1 identified by match to PFAM protein family HMM PF00753 YP_021595.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_021596.1 'similar to SP:P11004, and PID:154589; identified by sequence similarity' YP_021598.1 'similar to SP:P11004, PID:154589, SP:P11004, and PID:154589; identified by sequence similarity' YP_021599.1 similar to GP:3089609; identified by sequence similarity YP_021600.1 'similar to SP:P11004, and PID:154589; identified by sequence similarity' YP_021603.2 identified by match to PFAM protein family HMM PF01325 YP_021605.1 'similar to SP:P24178, GB:X57403, PID:41233, GB:U00096, and PID:1788815; identified by sequence similarity' YP_052650.1 'similar to GP:2293312, and GP:2293312; identified by sequence similarity' YP_021608.1 similar to GP:16410383; identified by sequence similarity YP_021609.1 identified by match to PFAM protein family HMM PF03551 YP_021610.1 'similar to SP:P10488, and PID:43786; identified by sequence similarity' YP_021612.1 'similar to SP:P36681, GB:U00096, PID:1786290, SP:P36681, GB:U00096, and PID:1786290; identified by sequence similarity' YP_021613.1 'similar to SP:P03064, PID:1045524, PID:151680, PID:501832, PID:1053000, SP:P03064, PID:1045524, PID:151680, PID:501832, and PID:1053000; identified by sequence similarity' YP_021614.2 similar to GP:10176560; identified by sequence similarity YP_021615.1 'Converts glucose to D-glucono-1,5 lactone' YP_021616.1 similar to GP:2226001; identified by sequence similarity YP_021618.1 similar to SP:P30748; identified by sequence similarity YP_021619.1 'similar to GP:2633801, and SP:Q00461; identified by sequence similarity' YP_021620.1 similar to SP:O31704; identified by sequence similarity YP_021621.2 'similar to GP:2633799, SP:P23761, PID:296728, and PID:58350; identified by sequence similarity' YP_021622.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_021623.1 catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways YP_021626.1 identified by match to PFAM protein family HMM PF01391 YP_021628.1 'similar to SP:P32677, GB:U00006, PID:396301, GB:U00096, and PID:1790391; identified by sequence similarity' YP_021629.1 'similar to SP:P14878, GB:X06083, and PID:43373; identified by sequence similarity' YP_021631.2 catalyzes the formation of O-acetyl -L-homoserine from L-homoserine and acetyl-CoA YP_021632.1 'similar to SP:O85467, and GP:6090935; identified by sequence similarity' YP_021633.1 'similar to GP:3290176, and GP:6090936; identified by sequence similarity' YP_021634.1 'similar to GP:6090937, and GP:6090937; identified by sequence similarity' YP_021636.1 similar to GP:9246918; identified by sequence similarity YP_022709.1 'similar to GP:9246917, and GP:9246917; identified by sequence similarity' YP_021642.1 'leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase' YP_021643.1 'similar to SP:P14878, GB:X06083, PID:43373, SP:P14878, GB:X06083, and PID:43373; identified by sequence similarity' YP_021644.1 similar to SP:P80102; identified by sequence similarity YP_021645.1 'similar to GP:2226150, and SP:P80102; identified by sequence similarity' YP_021646.1 identified by match to PFAM protein family HMM PF00589 YP_021647.1 'similar to GP:16411585, and GP:16411585; identified by sequence similarity' YP_021648.1 'similar to GP:16414732, and GP:16414732; identified by sequence similarity' YP_021649.1 'similar to GB:X54131, SP:P23467, and PID:35788; identified by sequence similarity' YP_021651.1 'similar to SP:P00575, GB:M38287, GB:M38292, GB:M38293, GB:M38304, GB:V00339, GB:V00340, GB:V00341, PID:147718, PID:147722, PID:147725, PID:147728, PID:396326, PID:42818, PID:42821, PID:551832, GB:U00096, PID:1666534, PID:1790419, SP:P00575, GB:M38287, GB:M38292, GB:M38293, GB:M38304, GB:V00339, GB:V00340, GB:V00341, PID:147718, PID:147722, PID:147725, PID:147728, PID:396326, PID:42818, PID:42821, PID:551832, GB:U00096, PID:1666534, and PID:1790419; identified by sequence similarity' YP_021652.1 'similar to SP:P00575, GB:M38287, GB:M38292, GB:M38293, GB:M38304, GB:V00339, GB:V00340, GB:V00341, PID:147718, PID:147722, PID:147725, PID:147728, PID:396326, PID:42818, PID:42821, PID:551832, GB:U00096, PID:1666534, PID:1790419, SP:P00575, GB:M38287, GB:M38292, GB:M38293, GB:M38304, GB:V00339, GB:V00340, GB:V00341, PID:147718, PID:147722, PID:147725, PID:147728, PID:396326, PID:42818, PID:42821, PID:551832, GB:U00096, PID:1666534, and PID:1790419; identified by sequence similarity' YP_021653.1 'similar to SP:P00575, GB:M38287, GB:M38292, GB:M38293, GB:M38304, GB:V00339, GB:V00340, GB:V00341, PID:147718, PID:147722, PID:147725, PID:147728, PID:396326, PID:42818, PID:42821, PID:551832, GB:U00096, PID:1666534, PID:1790419, SP:P00575, GB:M38287, GB:M38292, GB:M38293, GB:M38304, GB:V00339, GB:V00340, GB:V00341, PID:147718, PID:147722, PID:147725, PID:147728, PID:396326, PID:42818, PID:42821, PID:551832, GB:U00096, PID:1666534, and PID:1790419; identified by sequence similarity' YP_021654.1 similar to SP:P19844; identified by sequence similarity YP_021655.1 identified by match to PFAM protein family HMM PF03083 YP_021656.1 similar to SP:P32960; identified by sequence similarity YP_021657.1 identified by match to PFAM protein family HMM PF03929 YP_022710.1 'similar to SP:P06173, GB:M38311, PID:154355, PID:47919, SP:P06173, GB:M38311, PID:154355, and PID:47919; identified by sequence similarity' YP_021661.1 'similar to GP:2293167, SP:P06173, GB:M38311, PID:154355, and PID:47919; identified by sequence similarity' YP_021662.1 identified by match to TIGR protein family HMM TIGR01853 YP_021663.1 identified by match to PFAM protein family HMM PF01569 YP_021664.1 identified by match to PFAM protein family HMM PF00534 YP_021665.2 similar to SP:O31701; identified by sequence similarity YP_021666.1 'similar to SP:P30746, SP:P02372, PID:43143, GB:U00096, and PID:1788961; identified by sequence similarity' YP_021667.1 similar to GP:1019627; identified by sequence similarity YP_021669.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_021670.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_021671.1 'similar to GB:X60382, GB:M74050, GB:S68531, GB:S73619, GB:X58879, GB:X72578, GB:X72579, GB:X72580, SP:Q03692, PID:1335035, PID:1405723, PID:30014, PID:30095, PID:553796, and PID:560151; identified by sequence similarity' YP_021673.1 similar to SP:P37511; identified by sequence similarity YP_021674.1 'similar to GP:16413244, and GP:16413244; identified by sequence similarity' YP_021675.1 identified by match to TIGR protein family HMM TIGR00486 YP_021676.1 similar to GP:6686907; identified by sequence similarity YP_021677.1 'similar to SP:P22639, and PID:1088261; identified by sequence similarity' YP_021678.1 'similar to SP:P06008, GB:X02659, and PID:46478; identified by sequence similarity' YP_021684.1 'similar to GP:15023491, SP:P06173, GB:M38311, PID:154355, and PID:47919; identified by sequence similarity' YP_021685.1 'similar to SP:P06173, GB:M38311, PID:154355, and PID:47919; identified by sequence similarity' YP_021686.1 'similar to SP:P06173, GB:M38311, PID:154355, and PID:47919; identified by sequence similarity' YP_021691.1 'similar to SP:P24538, and SP:P24538; identified by sequence similarity' YP_021694.1 'similar to SP:P28836, GB:X60449, PID:48567, SP:P28836, GB:X60449, and PID:48567; identified by sequence similarity' YP_021695.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 YP_021696.1 identified by match to TIGR protein family HMM TIGR00278 YP_021697.1 identified by match to PFAM protein family HMM PF00484 YP_021698.1 'similar to SP:P07892, PID:436955, and PID:48025; identified by sequence similarity' YP_021699.1 identified by match to TIGR protein family HMM TIGR01770 YP_022714.1 'similar to GP:2984723, and GP:2984723; identified by sequence similarity' YP_021702.1 similar to GP:4894270; identified by sequence similarity YP_021704.1 identified by match to PFAM protein family HMM PF02698 YP_021705.1 'similar to SP:P05021, GB:X02826, PID:42609, GB:U00096, PID:1651460, PID:1787177, SP:P05021, GB:X02826, PID:42609, GB:U00096, PID:1651460, and PID:1787177; identified by sequence similarity' YP_021710.1 identified by match to PFAM protein family HMM PF03994 YP_021711.1 'similar to GP:17131434, SP:P07020, PID:43144, GB:U00096, PID:1788959, and PID:1800012; identified by sequence similarity' YP_021713.1 similar to GP:16414722; identified by sequence similarity YP_021714.1 'similar to GP:16411574, and GP:16411574; identified by sequence similarity' YP_021715.1 'similar to GP:15383626, and GP:15383626; identified by sequence similarity' YP_021716.1 'similar to GP:15025450, and GP:15025450; identified by sequence similarity' YP_021717.1 'similar to GP:15025451, and GP:15025451; identified by sequence similarity' YP_021718.2 identified by match to TIGR protein family HMM TIGR01076 YP_021719.1 identified by match to TIGR protein family HMM TIGR01167 YP_021722.1 'Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively' YP_021723.1 'similar to GB:X66403, SP:Q04844, PID:560153, GB:X66403, SP:Q04844, and PID:560153; identified by sequence similarity' YP_021725.1 similar to GP:18144083; identified by sequence similarity YP_021726.1 'similar to GB:L26336, SP:P11142, SP:P54652, PID:476705, and PID:639910; identified by sequence similarity' YP_021727.1 identified by match to TIGR protein family HMM TIGR01293 YP_021729.1 'similar to GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, PID:691763, GB:M98399, GB:M24795, GB:S67532, GB:S67044, GB:Z32770, GB:Z32754, GB:Z32755, GB:Z32756, GB:Z32757, GB:Z32758, GB:Z32759, GB:Z32760, GB:Z32761, GB:Z32762, GB:Z32763, GB:Z32764, GB:L06849, GB:L06850, GB:Z22924, SP:P16671, PID:525233, and PID:691763; identified by sequence similari' YP_021730.1 identified by match to PFAM protein family HMM PF01988 YP_021731.1 'similar to GP:10174675, and GP:10174675; identified by sequence similarity' YP_021732.1 'similar to GP:16411585, and GP:16411585; identified by sequence similarity' YP_021733.1 'similar to GP:16414732, and GP:16414732; identified by sequence similarity' YP_021734.1 'similar to GP:1881325, SP:P35852, and PID:308866; identified by sequence similarity' YP_021735.1 'similar to GP:1945655, SP:P35029, GB:X59038, and PID:47504; identified by sequence similarity' YP_021736.1 'similar to SP:P42422, GB:M19364, SP:P07316, PID:181099, and PID:181118; identified by sequence similarity' YP_021740.1 'similar to GP:15024467, GB:M19364, SP:P07316, PID:181099, and PID:181118; identified by sequence similarity' YP_022717.1 'similar to GB:M19364, SP:P07316, PID:181099, and PID:181118; identified by sequence similarity' YP_021744.1 identified by match to TIGR protein family HMM TIGR01732 YP_021745.1 'similar to GB:M35878, GB:M31159, GB:X64875, GB:S56205, GB:M36121, SP:P17936, PID:183116, PID:386791, and PID:398164; identified by sequence similarity' YP_021746.1 identified by match to PFAM protein family HMM PF00392 YP_021747.1 identified by match to PFAM protein family HMM PF00294 YP_021749.1 similar to GP:16505554; identified by sequence similarity YP_021750.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_021751.1 'similar to GP:17529933, GB:M35130, SP:P14638, GB:M31474, and PID:150072; identified by sequence similarity' YP_021754.1 similar to GP:7110139; identified by sequence similarity YP_022719.1 similar to GP:15023723; identified by sequence similarity YP_052651.1 identified by match to TIGR protein family HMM TIGR01818 YP_021758.2 'similar to SP:P23121, and PID:142387; identified by sequence similarity' YP_021759.1 converts O-succinylbenzoate to O-succinylbenzoyl-CoA YP_021760.1 'catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA' YP_021761.1 similar to GP:16411110; identified by sequence similarity YP_021762.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis YP_021764.1 synthesizes isochorismate acid from chorismate YP_021765.1 'catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate' YP_021767.1 'similar to SP:P42408, and SP:P42408; identified by sequence similarity' YP_021768.1 'similar to SP:P35088, and PID:454074; identified by sequence similarity' YP_021769.2 'similar to GP:15024487, and GP:15024487; identified by sequence similarity' YP_021770.1 'similar to GB:Z11697, GB:S53354, SP:Q01151, and PID:32028; identified by sequence similarity' YP_021772.1 'similar to GB:M84341, SP:P98005, and PID:155083; identified by sequence similarity' YP_021773.2 'catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose' YP_021774.1 'similar to SP:P39124, GB:L05004, and PID:152957; identified by sequence similarity' YP_021775.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_021776.2 'catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain' YP_021778.1 Converts (S)-lactate and NAD(+) to pyruvate and NADH YP_021781.1 'similar to SP:Q45514, SP:P26606, GB:D11109, PID:216433, PID:466645, GB:U00096, and PID:1789924; identified by sequence similarity' YP_021782.1 identified by match to PFAM protein family HMM PF02254 YP_021783.1 'similar to SP:P33162, and SP:P33162; identified by sequence similarity' YP_021784.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_021785.1 'similar to SP:P13295, GB:X15079, PID:48691, PID:49406, SP:P13295, GB:X15079, PID:48691, and PID:49406; identified by sequence similarity' YP_021786.1 'induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation' YP_021787.1 identified by match to PFAM protein family HMM PF01041 YP_021788.1 'similar to SP:P13295, GB:X15079, PID:48691, and PID:49406; identified by sequence similarity' YP_021789.1 similar to SP:P22744; identified by sequence similarity YP_021790.1 'similar to SP:P26908, PID:40173, and GB:AL009126; identified by sequence similarity' YP_021791.1 'similar to SP:P26908, PID:40173, GB:AL009126, SP:P26908, PID:40173, and GB:AL009126; identified by sequence similarity' YP_021792.1 'similar to GB:M72150, GB:J02907, GB:M57888, SP:P20718, PID:181157, PID:181164, PID:183155, and PID:338430; identified by sequence similarity' YP_021793.1 'similar to GB:L08611, SP:Q04699, GB:S56948, and PID:153725; identified by sequence similarity' YP_021795.1 'similar to GB:M13143, SP:P03952, and PID:190263; identified by sequence similarity' YP_021796.1 inhibitor of the KinA pathway of sporulation YP_021797.1 identified by match to PFAM protein family HMM PF03606 YP_021798.1 'similar to GP:4584088, and GP:4584088; identified by sequence similarity' YP_021799.1 'similar to GP:4584089, and GP:4584089; identified by sequence similarity' YP_021800.1 'Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA' YP_021801.1 similar to GP:10119873; identified by sequence similarity YP_021802.1 'similar to SP:P19196, GB:X53368, GB:Z48169, PID:48574, and PID:793895; identified by sequence similarity' YP_021803.1 'similar to GP:10175981, and SP:P04028; identified by sequence similarity' YP_021804.1 identified by match to PFAM protein family HMM PF02978 YP_021805.1 identified by match to TIGR protein family HMM TIGR00453 YP_021807.1 identified by match to PFAM protein family HMM PF02878 YP_021808.1 'similar to GP:3169326, SP:P15484, SP:P15485, SP:P15486, SP:P15487, PID:41157, PID:41158, PID:41159, and PID:41160; identified by sequence similarity' YP_021809.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_021810.2 'similar to SP:P37786, PID:454907, SP:P37786, and PID:454907; identified by sequence similarity' YP_021811.1 'similar to SP:P37786, PID:454907, SP:P37786, and PID:454907; identified by sequence similarity' YP_021812.1 'similar to GB:U14973, SP:P30054, PID:1220361, and PID:550027; identified by sequence similarity' YP_021813.2 'similar to SP:P25745, PID:42583, GB:U00096, and PID:1787378; identified by sequence similarity' YP_021814.1 'similar to SP:P25745, PID:42583, GB:U00096, and PID:1787378; identified by sequence similarity' YP_021818.1 identified by match to TIGR protein family HMM TIGR00895 YP_021819.1 similar to GP:15723948; identified by sequence similarity YP_021820.1 'similar to SP:P36681, GB:U00096, PID:1786290, SP:P36681, GB:U00096, and PID:1786290; identified by sequence similarity' YP_021821.1 identified by match to TIGR protein family HMM TIGR01655 YP_021823.1 'similar to GB:M31887, SP:P16626, and PID:152502; identified by sequence similarity' YP_021824.2 'similar to SP:P07105, GB:X05797, and PID:41406; identified by sequence similarity' YP_052652.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_021828.1 identified by match to TIGR protein family HMM TIGR01350 YP_021829.1 similar to GP:2984717; identified by sequence similarity YP_021830.1 'similar to GB:U09868, and PID:498885; identified by sequence similarity' YP_021831.2 'similar to GB:U09868, and PID:498885; identified by sequence similarity' YP_021832.1 similar to GP:9945956; identified by sequence similarity YP_021838.2 similar to GP:17132919; identified by sequence similarity YP_021839.1 'similar to GP:4894249, and GP:15023324; identified by sequence similarity' YP_021840.1 'similar to SP:P07105, GB:X05797, PID:41406, SP:P07105, GB:X05797, and PID:41406; identified by sequence similarity' YP_021841.1 'similar to SP:P28816, GB:J01830, and PID:154849; identified by sequence similarity' YP_021843.1 'similar to SP:P29444, GB:L08010, GB:D17291, GB:D16816, SP:P05451, SP:P48304, PID:474306, PID:474308, PID:487726, and PID:623413; identified by sequence similarity' YP_021845.1 identified by match to PFAM protein family HMM PF01892 YP_021846.1 'similar to GP:15026402, and GP:15026402; identified by sequence similarity' YP_021847.1 similar to GP:15022837; identified by sequence similarity YP_021848.1 similar to SP:P29444; identified by sequence similarity YP_021849.1 identified by match to PFAM protein family HMM PF03551 YP_021850.1 similar to SP:P29444; identified by sequence similarity YP_021851.1 'similar to GlpX type II fructose-1,6-bisphosphatase' YP_021854.2 'similar to SP:P29444, and SP:P29444; identified by sequence similarity' YP_021855.1 similar to SP:P29444; identified by sequence similarity YP_021856.1 identified by match to PFAM protein family HMM PF00376 YP_021857.1 'similar to SP:P80046, and PID:1478267; identified by sequence similarity' YP_021859.1 similar to GP:10172898; identified by sequence similarity YP_021860.1 similar to GP:17984559; identified by sequence similarity YP_021861.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_021862.1 'similar to SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, and PID:1789987; identified by sequence similarity' YP_021863.1 'similar to SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, PID:1789987, SP:P09099, GB:K01996, PID:148280, PID:43315, PID:466702, GB:U00096, and PID:1789987; identified by sequence similarity' YP_021864.1 'similar to GP:10176075, and GP:10176075; identified by sequence similarity' YP_022721.1 'similar to GP:15025823, and GP:15025823; identified by sequence similarity' YP_022722.1 'similar to GP:15076732, and GP:15076732; identified by sequence similarity' YP_021868.1 'similar to SP:P07999, SP:P39482, SP:P40288, GB:J04805, PID:142975, SP:P07999, SP:P39482, SP:P40288, GB:J04805, PID:142975, SP:P07999, SP:P39482, SP:P40288, GB:J04805, PID:142975, SP:P07999, SP:P39482, SP:P40288, GB:J04805, and PID:142975; identified by sequence similarity' YP_021869.1 'similar to SP:P35092, SP:P35093, SP:P35092, and SP:P35093; identified by sequence similarity' YP_021870.1 'similar to SP:P35092, and SP:P35093; identified by sequence similarity' YP_021871.1 'similar to SP:P35092, SP:P35093, SP:P35092, and SP:P35093; identified by sequence similarity' YP_021872.1 'similar to SP:P35092, and SP:P35093; identified by sequence similarity' YP_021874.1 'similar to GP:17984003, SP:P35092, and SP:P35093; identified by sequence similarity' YP_021875.1 'similar to GP:16415034, and GP:17984003; identified by sequence similarity' YP_021876.1 'similar to GP:10176103, and GP:10176103; identified by sequence similarity' YP_021877.1 'similar to SP:P35092, and SP:P35093; identified by sequence similarity' YP_021879.1 'similar to SP:P14949, SP:P35092, and SP:P35093; identified by sequence similarity' YP_021880.1 'similar to SP:P35092, and SP:P35093; identified by sequence similarity' YP_021882.1 'part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor' YP_021883.1 'similar to GP:10176108, and GP:10176108; identified by sequence similarity' YP_021887.1 'similar to GP:15026519, and GP:6523560; identified by sequence similarity' YP_021890.1 similar to GP:15024435; identified by sequence similarity YP_021891.1 'similar to GP:16411615, and GP:16411615; identified by sequence similarity' YP_021893.1 Converts (S)-lactate and NAD(+) to pyruvate and NADH YP_021895.1 'similar to GP:15025715, and GP:15025715; identified by sequence similarity' YP_021896.1 similar to GP:18143911; identified by sequence similarity YP_021897.1 identified by match to PFAM protein family HMM PF04226 YP_021898.1 'similar to SP:P27218, GB:X57401, and PID:43932; identified by sequence similarity' YP_021899.1 'similar to SP:P26288, and PID:581748; identified by sequence similarity' YP_021900.1 identified by match to PFAM protein family HMM PF02770 YP_021902.1 'Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation' YP_021903.1 identified by match to PFAM protein family HMM PF02737 YP_021907.1 'similar to SP:P38422, GB:D14662, SP:P30041, and PID:285949; identified by sequence similarity' YP_021908.1 'similar to SP:P08115, SP:P03065, GB:X02166, PID:46547, and PID:46631; identified by sequence similarity' YP_021909.1 'similar to GP:10176115, SP:P37022, and PID:1786322; identified by sequence similarity' YP_021910.1 identified by match to TIGR protein family HMM TIGR00106 YP_052653.1 'similar to GB:M34570, GB:X15882, GB:X15977, GB:M34572, GB:M34573, GB:M34571, PID:179709, PID:179711, PID:179713, and PID:30045; identified by sequence similarity' YP_021913.1 'similar to SP:Q08434, GB:S61781, PID:975350, PID:1934778, PID:2231217, SP:Q08434, GB:S61781, PID:975350, PID:1934778, and PID:2231217; identified by sequence similarity' YP_021914.2 similar to GP:15076770; identified by sequence similarity YP_021916.2 'similar to SP:P21111, GB:U09990, SP:P21111, and GB:U09990; identified by sequence similarity' YP_021917.1 identified by match to PFAM protein family HMM PF03222 YP_021918.1 similar to GP:7292701; identified by sequence similarity YP_021920.1 involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site YP_021922.1 identified by match to PFAM protein family HMM PF02588 YP_021927.2 identified by match to PFAM protein family HMM PF01381 YP_021929.1 'similar to GB:L18897, SP:Q07758, and PID:310295; identified by sequence similarity' YP_021931.1 identified by match to PFAM protein family HMM PF03734 YP_021932.1 'similar to GP:16410462, and GP:16410462; identified by sequence similarity' YP_021933.1 'similar to GP:16410463, and GP:15025450; identified by sequence similarity' YP_021934.1 similar to GP:16612134; identified by sequence similarity YP_021935.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_021936.1 similar to GP:15026761; identified by sequence similarity YP_021937.1 similar to GP:16410112; identified by sequence similarity YP_021938.1 'similar to SP:P33014, GB:U00009, PID:405955, GB:U00096, PID:1788322, SP:P33014, GB:U00009, PID:405955, GB:U00096, and PID:1788322; identified by sequence similarity' YP_021939.2 'similar to SP:P39899, GB:D13118, SP:P05496, PID:179255, PID:285908, and PID:38430; identified by sequence similarity' YP_021940.1 'similar to SP:Q9XBR7, and SP:Q9XBR7; identified by sequence similarity' YP_021941.1 similar to GP:10174795; identified by sequence similarity YP_021943.1 'similar to GP:2226151, and SP:P80102; identified by sequence similarity' YP_021944.1 'similar to GP:2226150, and SP:P80102; identified by sequence similarity' YP_021945.1 identified by match to TIGR protein family HMM TIGR01770 YP_021946.1 similar to SP:P80879; identified by sequence similarity YP_052654.1 'similar to SP:P21469, and SP:P21469; identified by sequence similarity' YP_021952.1 'similar to SP:P21469, and SP:P21469; identified by sequence similarity' YP_021953.1 identified by match to PFAM protein family HMM PF02915 YP_021956.1 similar to GP:1408507; identified by sequence similarity YP_021957.1 similar to GP:1408507; identified by sequence similarity YP_021958.1 identified by match to PFAM protein family HMM PF02782 YP_021959.1 identified by match to PFAM protein family HMM PF03100 YP_021960.1 'similar to SP:P27309, PID:1217911, PID:217030, SP:P27309, PID:1217911, and PID:217030; identified by sequence similarity' YP_021965.1 similar to GP:15076770; identified by sequence similarity YP_021966.1 'similar to SP:Q01563, GB:X65265, and PID:42200; identified by sequence similarity' YP_021968.1 'similar to SP:Q01563, GB:X65265, and PID:42200; identified by sequence similarity' YP_021969.1 'similar to SP:Q01563, GB:X65265, PID:42200, SP:Q01563, GB:X65265, and PID:42200; identified by sequence similarity' YP_021970.1 'similar to SP:P23134, PID:46385, SP:P23134, and PID:46385; identified by sequence similarity' YP_021971.1 'similar to SP:P23134, and PID:46385; identified by sequence similarity' YP_021972.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_021973.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_021974.1 similar to GP:4584702; identified by sequence similarity YP_021975.1 similar to SP:P39209; identified by sequence similarity YP_021976.2 identified by match to PFAM protein family HMM PF03372 YP_021977.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_021978.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_021980.1 'similar to GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, and PID:180195; identified by sequence similarity' YP_021981.1 'similar to GP:16409368, and SP:P37354; identified by sequence similarity' YP_021982.1 'similar to GP:15981634, and GP:15981634; identified by sequence similarity' YP_021983.1 similar to GP:18144333; identified by sequence similarity YP_021985.1 'similar to GP:12544594, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_021986.1 'similar to GP:15981928, and GP:15981928; identified by sequence similarity' YP_021987.1 'similar to GP:15981927, and GP:15981927; identified by sequence similarity' YP_021988.2 'similar to GB:X76687, SP:P39693, PID:495245, GB:X58536, GB:M12679, GB:M26432, GB:M28171, GB:M84386, GB:U06487, GB:U07230, GB:D31817, GB:Z47377, GB:L54059, GB:X96582, GB:U60422, SP:P01889, SP:P04222, SP:P10321, SP:P30484, SP:P30499, SP:P30500, SP:P30501, SP:P30502, SP:P30503, SP:P30504, SP:P30505, SP:P30506, SP:P30507, SP:P30508, SP:P30509, SP:P30510, SP:Q07000, GB:Y09156, PID:1448997, PID:1561555, PID:1857768, PID:2245531, PID:2394348, PID:2394350, PID:32235, PID:386891, PID:472312, PID:474336, PID:488362, PID:495038, PID:495040, PID:505388, PID:520835, PID:531198, PID:553532, PID:553541, PID:555682, PID:557643, PID:576473, PID:576477, PID:576479, PID:599786, PID:599788, PID:642239, PID:669132, PID:695256, PID:695258, PID:825674, and PID:951150; identified by sequence similarity' YP_021989.1 'similar to GP:16410793, and GP:16410793; identified by sequence similarity' YP_021990.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_021992.2 'similar to SP:O32231, SP:P31631, GB:M62363, and PID:150518; identified by sequence similarity' YP_021993.1 'similar to SP:Q06174, GB:K00558, GB:S62639, SP:P04687, SP:P05215, PID:340019, PID:340021, and PID:37492; identified by sequence similarity' YP_021994.1 identified by match to PFAM protein family HMM PF03840 YP_021997.1 identified by match to PFAM protein family HMM PF01156 YP_021999.1 'similar to GB:M96579, PID:149623, GB:M96579, and PID:149623; identified by sequence similarity' YP_022002.1 identified by match to PFAM protein family HMM PF01844 YP_022005.1 similar to GP:16414245; identified by sequence similarity YP_022008.2 'similar to GP:16414730, and GP:16414730; identified by sequence similarity' YP_022014.1 similar to GP:6739656; identified by sequence similarity YP_022015.2 similar to GP:19747599; identified by sequence similarity YP_022016.1 'similar to GP:5059250, and GP:5059250; identified by sequence similarity' YP_022021.1 similar to GP:4894305; identified by sequence similarity YP_022022.2 identified by match to PFAM protein family HMM PF02899 YP_022023.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_022024.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_022025.2 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_022027.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_022028.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate YP_022029.1 identified by match to PFAM protein family HMM PF04198 YP_022030.1 identified by match to TIGR protein family HMM TIGR00411 YP_022031.1 'sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen' YP_022034.1 'similar to GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, and PID:485909; identified by sequence similarity' YP_022035.1 'similar to GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, and PID:485909; identified by sequence similarity' YP_022036.1 'similar to GB:L20320, GB:X79193, GB:X77303, SP:P50613, PID:1486357, PID:2125816, PID:348243, PID:468789, and PID:485909; identified by sequence similarity' YP_022038.1 identified by match to PFAM protein family HMM PF04239 YP_022039.1 'hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates' YP_022040.1 similar to GP:10176190; identified by sequence similarity YP_022041.1 'similar to SP:Q08022, PID:312711, SP:Q08022, and PID:312711; identified by sequence similarity' YP_022042.1 'similar to SP:Q08022, PID:312711, SP:Q08022, and PID:312711; identified by sequence similarity' YP_022043.1 'similar to SP:Q08022, PID:312711, SP:Q08022, and PID:312711; identified by sequence similarity' YP_022044.1 'similar to SP:Q08022, PID:312711, SP:Q08022, and PID:312711; identified by sequence similarity' YP_022045.1 identified by match to PFAM protein family HMM PF03379 YP_022046.2 identified by match to TIGR protein family HMM TIGR01813 YP_022047.1 'similar to SP:P13429, GB:X16664, PID:42956, PID:967127, PID:264034, SP:P13429, GB:X16664, PID:42956, PID:967127, and PID:264034; identified by sequence similarity' YP_022048.1 identified by match to TIGR protein family HMM TIGR01853 YP_022049.1 hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation YP_022050.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_022051.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_022053.1 identified by match to PFAM protein family HMM PF04020 YP_022056.1 'The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate' YP_022057.1 'The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion' YP_022058.1 'similar to GB:D31766, SP:P46926, and PID:498158; identified by sequence similarity' YP_022062.1 'similar to SP:P37717, GB:X54676, and PID:39288; identified by sequence similarity' YP_022066.1 similar to GP:4894257; identified by sequence similarity YP_022067.2 'similar to GP:4894256, and GP:4894256; identified by sequence similarity' YP_022068.2 'similar to GP:16411617, and GP:16411617; identified by sequence similarity' YP_022069.1 'similar to GB:J02621, GB:M21339, SP:P05114, PID:306863, and PID:386779; identified by sequence similarity' YP_022070.1 'similar to GP:6941979, and GP:6941979; identified by sequence similarity' YP_022071.1 'similar to SP:P25737, GB:M89774, PID:405901, PID:466778, GB:U00096, PID:1788480, SP:P25737, GB:M89774, PID:405901, PID:466778, GB:U00096, and PID:1788480; identified by sequence similarity' YP_022072.1 similar to SP:P23212; identified by sequence similarity YP_022074.1 'similar to SP:P45861, GB:X75342, and PID:406738; identified by sequence similarity' YP_022075.2 'similar to SP:P09399, and PID:49267; identified by sequence similarity' YP_022076.1 'similar to SP:Q05375, and PID:49228; identified by sequence similarity' YP_022077.1 'similar to SP:Q05375, and PID:49228; identified by sequence similarity' YP_022078.1 'similar to SP:Q05375, and PID:49228; identified by sequence similarity' YP_022079.1 identified by match to PFAM protein family HMM PF00034 YP_022083.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_022085.1 identified by match to TIGR protein family HMM TIGR00741 YP_022086.2 'similar to SP:P35088, PID:454074, GB:S78694, GB:L16895, GB:U22384, GB:S45875, GB:M84150, GB:M94054, SP:P28300, PID:187189, and PID:187278; identified by sequence similarity' YP_022087.1 'similar to GB:M35663, GB:M85294, SP:P19525, PID:1537049, PID:189506, and PID:189782; identified by sequence similarity' YP_022088.1 'similar to GB:L07033, SP:P35914, PID:1292941, and PID:184503; identified by sequence similarity' YP_022089.2 'similar to GP:16415185, and SP:P54421; identified by sequence similarity' YP_022090.1 'similar to GP:15023742, and GP:16410636; identified by sequence similarity' YP_022092.1 'similar to GB:M13144, GB:M13981, GB:X04446, GB:X04445, SP:P05111, PID:1204105, PID:186413, PID:307068, and PID:490130; identified by sequence similarity' YP_022093.1 'similar to GB:J05428, SP:P16662, GB:S82485, PID:340080, GB:J05428, SP:P16662, GB:S82485, and PID:340080; identified by sequence similarity' YP_022094.1 'similar to SP:P32732, GB:Z18631, PID:49322, and GB:AL009126; identified by sequence similarity' YP_022095.1 identified by match to PFAM protein family HMM PF04007 YP_022096.2 similar to SP:P23340; identified by sequence similarity YP_022097.2 'similar to SP:P32732, GB:Z18631, PID:49322, and GB:AL009126; identified by sequence similarity' YP_022098.1 identified by match to PFAM protein family HMM PF01522 YP_022099.1 'similar to GP:6723449, and GP:6723449; identified by sequence similarity' YP_022100.1 'similar to GP:4584201, and GP:4584201; identified by sequence similarity' YP_022101.1 'similar to GP:6723451, and GP:6723451; identified by sequence similarity' YP_022103.1 'similar to GP:4584203, and GP:4584203; identified by sequence similarity' YP_022104.1 'similar to GB:M16505, GB:M16505, GB:J04964, GB:M17591, SP:P08842, PID:338514, PID:338565, PID:338607, PID:338608, GB:M16505, GB:M16505, GB:J04964, GB:M17591, SP:P08842, PID:338514, PID:338565, PID:338607, and PID:338608; identified by sequence similarity' YP_022105.1 'similar to SP:P46319, GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, PID:179460, GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, and PID:179460; identified by sequence similarity' YP_022106.1 similar to SP:P46317; identified by sequence similarity YP_022107.1 identified by match to TIGR protein family HMM TIGR00853 YP_022108.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_022109.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_022110.1 'similar to SP:P46319, GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, PID:179460, GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, and PID:179460; identified by sequence similarity' YP_022111.1 similar to SP:P46317; identified by sequence similarity YP_022112.1 'similar to GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, PID:179460, GB:M16411, GB:M16412, GB:M16413, GB:M16414, GB:M16415, GB:M16416, GB:M16417, GB:M16418, GB:M16419, GB:M16420, GB:M16421, GB:M16422, GB:M16423, GB:M16424, GB:M13520, GB:J04178, GB:S61298, GB:S62072, GB:S76982, SP:P06865, PID:179458, and PID:179460; identified by sequence similarity' YP_022113.1 'similar to GP:6174689, and SP:P39817; identified by sequence similarity' YP_022114.2 identified by match to PFAM protein family HMM PF03772 YP_022115.1 similar to GP:16411322; identified by sequence similarity YP_022116.1 'similar to GB:M27819, GB:X12609, GB:S68680, GB:X77737, GB:X77738, SP:P02730, PID:178216, PID:178220, PID:28714, and PID:553169; identified by sequence similarity' YP_022117.1 'similar to SP:P20668, GB:M65105, GB:X91117, GB:X91120, GB:X91121, GB:X91122, GB:X91123, GB:X91124, GB:X91125, GB:X91126, GB:X91127, GB:X91118, GB:X91119, SP:P23975, PID:1143479, and PID:189258; identified by sequence similarity' YP_022118.2 'similar to GP:1881237, and GP:1881237; identified by sequence similarity' YP_022121.1 identified by match to TIGR protein family HMM TIGR01765; similar to GP:21685514; identified by sequence similarity YP_022123.1 identified by match to PFAM protein family HMM PF01654 YP_022124.1 similar to GP:4514629; identified by sequence similarity YP_022125.1 identified by match to PFAM protein family HMM PF03155 YP_022126.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_022127.1 'similar to GB:M74493, GB:M33384, GB:M74491, SP:P16587, SP:P32889, PID:178160, PID:178162, and PID:178981; identified by sequence similarity' YP_022128.1 'similar to GP:16411647, and GP:16411647; identified by sequence similarity' YP_022129.1 similar to GP:17129856; identified by sequence similarity YP_022131.1 'similar to GP:17983906, and GP:17983906; identified by sequence similarity' YP_022133.1 'similar to GB:Y00264, GB:X06989, GB:M24546, GB:M24547, GB:M34862, GB:M34863, GB:M34864, GB:M34865, GB:M34866, GB:M34867, GB:M34868, GB:M34869, GB:M34870, GB:M34871, GB:M34872, GB:M34873, GB:M34874, GB:M34876, GB:M34877, GB:M34878, GB:M34879, GB:M33112, GB:M34875, GB:M15533, GB:M18734, GB:S60721, GB:S61380, GB:S61383, GB:X06981, GB:X06982, GB:M15532, GB:S41242, GB:S41243, GB:S45135, GB:S45136, GB:X13471, GB:X13475, GB:X13466, GB:X13467, GB:X13468, GB:X13469, GB:X13470, GB:X13472, GB:X13473, GB:X13474, GB:X13476, GB:X13477, GB:X13478, GB:X13479, GB:X13487, GB:X13488, GB:X88307, GB:X88557, SP:P05067, PID:178615, PID:516074, PID:609449, PID:871360, PID:929611, and PID:929612; identified by sequence similarity' YP_022729.1 catalyzes the transamination of D-amino acids and their alpha-keto acids YP_022141.1 identified by match to PFAM protein family HMM PF03806 YP_022146.1 'similar to GB:U04815, GB:U04818, GB:U04824, GB:U04816, GB:U04817, SP:P21127, PID:189481, PID:507158, PID:507160, PID:507162, PID:507164, PID:507166, PID:507168, PID:507427, and PID:507429; identified by sequence similarity' YP_022147.1 'similar to SP:P16574, GB:X58355, and PID:39353; identified by sequence similarity' YP_022149.1 'similar to GP:15026307, and SP:P32820; identified by sequence similarity' YP_022150.1 identified by match to TIGR protein family HMM TIGR01770 YP_022151.1 identified by match to PFAM protein family HMM PF00320 YP_022152.1 'similar to SP:P15555, and SP:P15555; identified by sequence similarity' YP_022153.1 'similar to SP:P15555, and SP:P15555; identified by sequence similarity' YP_022160.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_022161.1 'similar to SP:P20900, and SP:P20900; identified by sequence similarity' YP_022162.1 'similar to SP:P27369, and PID:154510; identified by sequence similarity' YP_022163.1 'similar to GP:2832800, and GP:2832800; identified by sequence similarity' YP_022164.1 'similar to GP:2832799, and SP:P20900; identified by sequence similarity' YP_022165.1 identified by match to PFAM protein family HMM PF01381 YP_022167.1 identified by match to PFAM protein family HMM PF03092 YP_022168.1 identified by match to TIGR protein family HMM TIGR01254 YP_022170.1 similar to GP:10172986; identified by sequence similarity YP_022171.1 'similar to GP:15024664, and GP:15024664; identified by sequence similarity' YP_022172.1 identified by match to TIGR protein family HMM TIGR01746 YP_022173.1 attenuator function for control of operon expression YP_022174.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_022176.1 identified by match to PFAM protein family HMM PF04007 YP_022177.1 with TagG is involved in the export of teichoic acids YP_022178.1 'similar to GB:M83773, GB:X78121, SP:P24386, PID:339023, PID:36747, and PID:460795; identified by sequence similarity' YP_022179.1 'similar to GP:1773354, and SP:P27829; identified by sequence similarity' YP_022183.1 'similar to GP:6424992, and GP:6424992; identified by sequence similarity' YP_022185.1 'similar to GB:M64032, SP:P25544, and PID:145020; identified by sequence similarity' YP_022186.1 similar to GP:11023523; identified by sequence similarity YP_022187.1 'similar to SP:P39751, GB:X58199, SP:P35612, and PID:29369; identified by sequence similarity' YP_022188.2 similar to GP:4584136; identified by sequence similarity YP_022189.1 similar to GP:15025709; identified by sequence similarity YP_022191.1 similar to GP:4584135; identified by sequence similarity YP_022192.1 identified by match to PFAM protein family HMM PF03379 YP_022193.1 identified by match to PFAM protein family HMM PF03205 YP_022196.1 'similar to GB:D14134, GB:D13804, SP:Q06609, PID:285977, and PID:397827; identified by sequence similarity' YP_022197.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_022198.1 'similar to SP:P02372, PID:43143, GB:U00096, PID:1788961, SP:P02372, PID:43143, GB:U00096, and PID:1788961; identified by sequence similarity' YP_022199.1 'similar to SP:P02372, PID:43143, GB:U00096, PID:1788961, SP:P02372, PID:43143, GB:U00096, and PID:1788961; identified by sequence similarity' YP_022200.1 Catalyzes the transfer of electrons from NADH to quinone YP_022201.1 Catalyzes the transfer of electrons from NADH to quinone YP_052655.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_022203.1 Catalyzes the transfer of electrons from NADH to quinone YP_022204.1 Catalyzes the transfer of electrons from NADH to quinone YP_022205.1 Catalyzes the transfer of electrons from NADH to quinone YP_022206.1 Catalyzes the transfer of electrons from NADH to quinone YP_022207.1 catalyzes the transfer of electrons from NADH to ubiquinone YP_022208.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_022210.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_022211.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_022212.1 'similar to GP:6759486, and GP:6759486; identified by sequence similarity' YP_022213.1 'similar to GB:M96233, GB:M96234, GB:M99421, GB:M99422, GB:X68677, GB:X56837, SP:P09488, SP:Q03013, PID:306817, PID:306819, PID:31937, GB:M96233, GB:M96234, GB:M99421, GB:M99422, GB:X68677, GB:X56837, SP:P09488, SP:Q03013, PID:306817, PID:306819, and PID:31937; identified by sequence similarity' YP_022214.1 'similar to GB:M96233, GB:M96234, GB:M99421, GB:M99422, GB:X68677, GB:X56837, SP:P09488, SP:Q03013, PID:306817, PID:306819, PID:31937, GB:M96233, GB:M96234, GB:M99421, GB:M99422, GB:X68677, GB:X56837, SP:P09488, SP:Q03013, PID:306817, PID:306819, and PID:31937; identified by sequence similarity' YP_022215.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_022216.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_022217.2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_022218.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_022219.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_022220.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_022221.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_022222.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_022223.1 'similar to GB:M64082, SP:Q01740, and PID:182671; identified by sequence similarity' YP_022224.1 'similar to GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, PID:531476, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_022226.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_022227.1 'catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate' YP_022228.1 'similar to GB:S78694, GB:L16895, GB:U22384, GB:S45875, GB:M84150, GB:M94054, SP:P28300, PID:187189, PID:187278, GB:S78694, GB:L16895, GB:U22384, GB:S45875, GB:M84150, GB:M94054, SP:P28300, PID:187189, and PID:187278; identified by sequence similarity' YP_022229.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity YP_022230.1 identified by match to PFAM protein family HMM PF01451 YP_022231.1 'similar to GP:10174132, and SP:P08837; identified by sequence similarity' YP_022232.1 'similar to SP:P38100, PID:1750387, SP:P38100, and PID:1750387; identified by sequence similarity' YP_022233.1 'similar to SP:P35647, GB:Z12609, and PID:41332; identified by sequence similarity' YP_022235.1 identified by match to PFAM protein family HMM PF02659 YP_022236.2 identified by match to PFAM protein family HMM PF03481 YP_022239.1 'similar to GB:M38106, GB:M60496, GB:L05367, GB:S67677, GB:M60915, GB:X76888, GB:U17656, GB:U17657, GB:U17658, GB:U17659, GB:U17660, GB:U17661, GB:U17662, GB:U17663, GB:U17664, GB:U17665, GB:U17666, GB:U17667, GB:U17668, GB:U17669, GB:U17670, GB:U17671, GB:U17672, GB:U17673, GB:U17674, GB:U17675, GB:U17676, GB:U17677, GB:U17678, GB:U17679, GB:U17680, GB:U17681, GB:U17682, GB:U17683, GB:U17684, GB:U17685, GB:U17686, GB:U17687, GB:U17688, GB:U17689, GB:U17690, GB:M89914, GB:S79000, GB:M61213, GB:M38107, GB:U17084, GB:X76889, GB:M38108, GB:M38109, GB:M38110, GB:M38111, GB:M38112, GB:M38113, GB:M38114, GB:M38115, GB:M38116, GB:D10490, GB:S61428, GB:S51751, GB:D12625, SP:P21359, PID:1060901, PID:1084090, PID:1084091, PID:1084092, PID:1084093, PID:1084094, PID:189165, PID:219940, and PID:292354; identified by sequence similarity' YP_022240.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_022241.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_022242.1 'RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome' YP_052656.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_022245.2 'type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese' YP_022730.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_022250.1 'catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate' YP_022251.1 'similar to GB:X02751, GB:L00043, GB:X53291, GB:X53292, GB:X05564, GB:X05565, GB:L00040, GB:L00041, GB:L00042, GB:M10055, GB:K03211, GB:M25898, GB:S68580, GB:X07440, GB:X61282, GB:X00645, SP:P01111, SP:P01112, PID:1335234, PID:1335235, PID:1335236, PID:1335287, PID:190927, PID:190938, PID:35092, PID:35103, PID:465130, PID:553520, PID:553633, PID:553635, PID:553638, PID:825697, and PID:929658; identified by sequence similarity' YP_022253.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_022254.1 'participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling' YP_022255.2 identified by match to PFAM protein family HMM PF00440 YP_022256.1 similar to SP:P45867; identified by sequence similarity YP_022257.1 similar to SP:P45857; identified by sequence similarity YP_022258.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_022259.1 'Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation' YP_022261.1 'similar to GB:X12921, GB:M55090, GB:M55092, GB:M55093, GB:M55094, GB:M57475, GB:M55097, GB:M55098, GB:M57726, GB:M55101, GB:M55102, GB:M55103, GB:M55104, GB:M55105, GB:X12911, GB:M37457, GB:X12910, GB:X12912, GB:X12913, GB:X12914, GB:X12915, GB:X12916, GB:X12917, GB:M57727, GB:X12918, GB:X12919, GB:X12920, GB:X12922, GB:X12923, GB:M28287, GB:M35821, GB:M35822, GB:M28289, GB:M28290, GB:M28291, GB:M28292, GB:M28293, SP:P13637, PID:1359715, PID:1364272, PID:179202, PID:179227, and PID:497763; identified by sequence similarity' YP_022262.1 'similar to GP:6759489, and SP:O66043; identified by sequence similarity' YP_022263.1 'similar to GP:6759488, and GP:6759488; identified by sequence similarity' YP_022264.1 'similar to GP:6759486, and GP:6759486; identified by sequence similarity' YP_022265.1 'similar to GP:5305717, and GP:5305717; identified by sequence similarity' YP_022268.2 similar to GP:6759482; identified by sequence similarity YP_022269.1 'similar to GP:6759481, and GP:6759481; identified by sequence similarity' YP_022270.1 'similar to GP:6759480, and GP:6759480; identified by sequence similarity' YP_022271.1 similar to GP:6759479; identified by sequence similarity YP_022272.3 'catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential' YP_022277.1 'similar to GP:16033408, and GP:16033408; identified by sequence similarity' YP_022279.2 similar to GP:15026551; identified by sequence similarity YP_022281.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_022282.1 'catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase' YP_022283.1 'similar to SP:P29586, and SP:P29586; identified by sequence similarity' YP_022284.1 'similar to SP:P30528, PID:581837, PID:1542956, SP:P30528, PID:581837, and PID:1542956; identified by sequence similarity' YP_022285.1 identified by match to TIGR protein family HMM TIGR01655 YP_022286.1 'similar to PIR:A43577, GB:X75450, GB:X84707, SP:Q16674, PID:438058, and PID:683460; identified by sequence similarity' YP_022289.1 identified by match to TIGR protein family HMM TIGR01229 YP_052657.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_022292.1 'similar to GP:16413919, and GP:4914624; identified by sequence similarity' YP_022293.1 'similar to SP:P38119, and PID:466983; identified by sequence similarity' YP_022294.1 'similar to GB:X59960, GB:X52679, GB:M59916, GB:M59917, GB:X52678, GB:M81780, GB:X63600, SP:P17405, PID:179095, PID:28880, PID:402621, PID:553192, PID:556809, PID:825629, PID:972769, and PID:972770; identified by sequence similarity' YP_022295.1 identified by match to PFAM protein family HMM PF00905 YP_022296.1 'similar to SP:P31159, PID:47618, SP:P31159, and PID:47618; identified by sequence similarity' YP_022297.1 'similar to SP:P31159, and PID:47618; identified by sequence similarity' YP_022732.1 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown YP_022301.1 'similar to GB:M61832, GB:M61831, SP:P23526, PID:178277, and PID:178279; identified by sequence similarity' YP_022302.1 'similar to GP:17131675, GB:M64594, SP:Q99102, and PID:188882; identified by sequence similarity' YP_022303.1 'similar to GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, PID:531476, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_022304.1 'similar to GP:10173697, GB:U10998, GB:U10999, GB:U11000, GB:U11001, GB:U11002, GB:U11003, GB:U11004, GB:U11005, GB:X80910, SP:P08129, SP:P37140, PID:506772, and PID:531476; identified by sequence similarity' YP_022307.2 'similar to SP:P31159, PID:47618, SP:P31159, and PID:47618; identified by sequence similarity' YP_022308.1 'similar to GB:M95923, PID:553159, GB:M95923, and PID:553159; identified by sequence similarity' YP_022310.1 'similar to GB:M21535, GB:M17254, GB:X85347, GB:X88004, SP:P11308, PID:182185, and PID:182187; identified by sequence similarity' YP_022311.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta YP_022314.1 'similar to GB:L12398, SP:P21917, PID:291946, GB:L12398, SP:P21917, and PID:291946; identified by sequence similarity' YP_022315.2 'similar to GP:10176451, GB:M12886, GB:D13082, GB:D13087, GB:D13088, GB:L34740, GB:L09705, GB:M12510, GB:M12888, GB:X57603, GB:X57604, SP:P01850, PID:1100183, PID:1100191, PID:1552519, PID:2218048, PID:2218051, PID:23594, PID:338833, PID:338837, PID:338954, PID:339010, PID:407759, PID:553695, PID:553703, PID:673423, and PID:758613; identified by sequence similarity' YP_022316.1 'similar to GB:D13748, SP:P04765, PID:219403, PID:485388, GB:D13748, SP:P04765, PID:219403, and PID:485388; identified by sequence similarity' YP_022317.1 identified by match to PFAM protein family HMM PF04241 YP_022318.1 'similar to GP:16410054, and GP:16410054; identified by sequence similarity' YP_022321.2 'similar to SP:P77328, GB:X74328, SP:P34972, and PID:407807; identified by sequence similarity' YP_022322.2 similar to GP:15023501; identified by sequence similarity YP_022323.1 'similar to SP:P33446, GB:X64876, PID:313842, SP:P33446, GB:X64876, and PID:313842; identified by sequence similarity' YP_022324.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine YP_022325.1 'similar to GP:16413202, and GP:16413202; identified by sequence similarity' YP_052658.1 identified by match to TIGR protein family HMM TIGR01842 YP_022328.1 similar to GP:16410144; identified by sequence similarity YP_022329.1 'similar to GP:2633758, SP:P14034, and PID:44759; identified by sequence similarity' YP_022330.1 'similar to GP:15983621, and GP:15983621; identified by sequence similarity' YP_022331.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_022332.2 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis YP_022333.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_022334.1 similar to GP:16411875; identified by sequence similarity YP_022335.1 'similar to SP:P05845, GB:X17693, and PID:581281; identified by sequence similarity' YP_022336.1 activator of nucleoside metabolism YP_022337.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds YP_022338.1 'similar to GP:5123537, and GP:5123537; identified by sequence similarity' YP_022342.1 'catalyzes the phosphorylation of three vitamin B6 precursors, pyridoxal, pyridoxine and pyridoxamine' YP_022343.1 similar to GP:16411644; identified by sequence similarity YP_052659.1 similar to GP:17427030; identified by sequence similarity YP_022347.1 similar to GP:1770002; identified by sequence similarity YP_022348.1 'similar to SP:P13295, GB:X15079, PID:48691, and PID:49406; identified by sequence similarity' YP_022350.1 similar to GP:8247359; identified by sequence similarity YP_022734.1 'similar to GB:X73625, GB:X84765, PID:313276, PID:872022, PID:2335148, PID:2335150, GB:X73625, GB:X84765, PID:313276, PID:872022, PID:2335148, and PID:2335150; identified by sequence similarity' YP_022353.1 identified by match to PFAM protein family HMM PF03631 YP_022354.1 similar to GP:15981312; identified by sequence similarity YP_022355.1 identified by match to PFAM protein family HMM PF02591 YP_022356.1 identified by match to PFAM protein family HMM PF03023 YP_022357.1 similar to SP:P49851; identified by sequence similarity YP_022358.1 identified by match to PFAM protein family HMM PF03023 YP_022359.1 identified by match to PFAM protein family HMM PF00535 YP_022360.1 similar to GP:15026421; identified by sequence similarity YP_022363.3 identified by match to PFAM protein family HMM PF04172 YP_022735.1 'similar to SP:P03064, PID:1045524, PID:151680, PID:501832, PID:1053000, SP:P03064, PID:1045524, PID:151680, PID:501832, and PID:1053000; identified by sequence similarity' YP_022364.1 similar to SP:P10245; identified by sequence similarity YP_022365.1 identified by match to PFAM protein family HMM PF00440 YP_022366.1 'similar to SP:P21504, GB:U00096, PID:1788960, SP:P21504, GB:U00096, and PID:1788960; identified by sequence similarity' YP_022367.1 'this fusion consists of methionine sulfoxide A reductase at the N-terminus and B at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion' YP_022369.1 'similar to SP:P18780, PID:1088257, SP:P18780, and PID:1088257; identified by sequence similarity' YP_022370.1 in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases YP_022372.1 negatively regulates murein hydrolase activity YP_022736.1 'similar to GP:1770002, SP:P08782, GB:X07547, PID:40733, PID:40746, PID:1124828, and PID:1124827; identified by sequence similarity' YP_022375.1 'similar to SP:P08782, GB:X07547, PID:40733, PID:40746, PID:1124828, and PID:1124827; identified by sequence similarity' YP_022376.2 'similar to GB:M28880, GB:X16609, GB:X16609, SP:P16157, GB:S82671, PID:1845219, PID:747710, GB:M28880, GB:X16609, GB:X16609, SP:P16157, GB:S82671, PID:1845219, and PID:747710; identified by sequence similarity' YP_052660.1 identified by match to PFAM protein family HMM PF02687 YP_022379.1 identified by match to PFAM protein family HMM PF02898 YP_022380.1 'similar to GB:J05158, SP:P22792, PID:179936, GB:J05158, SP:P22792, and PID:179936; identified by sequence similarity' YP_022381.1 'similar to GP:16414357, and GP:16414357; identified by sequence similarity' YP_022737.1 'similar to SP:P56583, GB:U06641, SP:P23765, SP:P54855, PID:458399, and PID:475759; identified by sequence similarity' YP_022385.1 identified by match to PFAM protein family HMM PF03721 YP_022386.1 'similar to GP:15023778, and GP:15023778; identified by sequence similarity' YP_022387.1 'similar to GP:15023777, and GP:15023777; identified by sequence similarity' YP_022388.1 'similar to GB:M14059, GB:M15801, GB:M10905, GB:X02761, GB:M14060, GB:A14133, GB:X04530, GB:K00055, GB:K00799, GB:M27589, GB:M12549, SP:P02751, PID:182704, and PID:553295; identified by sequence similarity' YP_022389.1 similar to GP:17430315; identified by sequence similarity YP_022390.1 identified by match to PFAM protein family HMM PF03060 YP_022391.1 similar to SP:O31605; identified by sequence similarity YP_022393.1 identified by match to PFAM protein family HMM PF04055 YP_022394.2 SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_022396.1 'similar to SP:P39668, GB:M36693, GB:X07834, GB:X14322, GB:X15132, GB:X59445, GB:X65965, GB:Y00472, GB:L34157, GB:A12178, GB:A12179, GB:Y00985, GB:S77127, SP:P04179, PID:1129044, PID:1330301, PID:1330302, PID:1330303, PID:1335215, PID:1906310, PID:338286, PID:34707, PID:34709, PID:34711, PID:34712, PID:34795, PID:36518, and PID:36537; identified by sequence similarity' YP_022397.1 'similar to GB:U09281, GB:U09280, GB:U09279, PID:1468955, PID:1468956, PID:532764, PID:532768, PID:624871, GB:U09281, GB:U09280, GB:U09279, PID:1468955, PID:1468956, PID:532764, PID:532768, and PID:624871; identified by sequence similarity' YP_022398.1 'similar to GB:U09281, GB:U09280, GB:U09279, PID:1468955, PID:1468956, PID:532764, PID:532768, PID:624871, GB:U09281, GB:U09280, GB:U09279, PID:1468955, PID:1468956, PID:532764, PID:532768, and PID:624871; identified by sequence similarity' YP_022399.1 'similar to GP:16409654, and GP:16409654; identified by sequence similarity' YP_022400.1 'similar to GB:U09281, GB:U09280, GB:U09279, PID:1468955, PID:1468956, PID:532764, PID:532768, and PID:624871; identified by sequence similarity' YP_022401.1 similar to GP:16412744; identified by sequence similarity YP_022402.1 'catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis' YP_022403.1 unwinds double stranded DNA YP_022404.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_022405.1 'similar to GB:M60484, GB:X12656, GB:J03805, SP:P05323, SP:P11082, PID:178438, PID:190226, and PID:35581; identified by sequence similarity' YP_022406.1 'similar to GP:10176657, and GP:10176657; identified by sequence similarity' YP_022407.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_022408.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA YP_022409.1 'binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21' YP_022410.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_022411.1 'similar to GP:16415462, and GP:16415462; identified by sequence similarity' YP_022412.1 identified by match to PFAM protein family HMM PF03317 YP_022413.1 'similar to GB:M26880, GB:M17597, SP:P02248, PID:1304128, PID:1490419, PID:340058, PID:340068, PID:825728, GB:M26880, GB:M17597, SP:P02248, PID:1304128, PID:1490419, PID:340058, PID:340068, and PID:825728; identified by sequence similarity' YP_022414.2 'similar to GB:M14219, SP:P07585, PID:181170, and PID:609452; identified by sequence similarity' YP_022415.1 'similar to SP:P37522, GB:M25108, SP:P05106, and PID:386833; identified by sequence similarity' YP_022416.1 identified by match to TIGR protein family HMM TIGR01199 YP_022417.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_022418.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_052661.1 'in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE' YP_022421.1 'similar to GB:L14854, PID:292795, PID:975612, PID:975613, GB:L14854, PID:292795, PID:975612, and PID:975613; identified by sequence similarity' YP_022422.2 involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; necessary for sporulation YP_022423.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_022424.1 in Escherichia coli transcription of this gene is enhanced by polyamines