-- dump date 20140618_211726 -- class Genbank::CDS -- table cds_note -- id note YP_005539686.1 COG0593 ATPase involved in DNA replication initiation YP_005539687.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005539688.1 COG2501 Uncharacterized conserved protein YP_005539689.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005539691.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005539692.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005539693.1 COG0516 IMP dehydrogenase/GMP reductase YP_005539694.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005539695.1 COG0214 Pyridoxine biosynthesis enzyme YP_005539696.1 COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis YP_005539697.1 COG0172 Seryl-tRNA synthetase YP_005539698.1 COG1929 Glycerate kinase YP_005539699.1 COG1428 Deoxynucleoside kinases YP_005539700.1 COG1428 Deoxynucleoside kinases YP_005539701.1 COG3858 Predicted glycosyl hydrolase YP_005539702.1 COG1335 Amidases related to nicotinamidase YP_005539703.1 COG0590 Cytosine/adenosine deaminases YP_005539705.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005539706.1 COG0718 Uncharacterized protein conserved in bacteria YP_005539707.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005539711.1 COG4915 5-bromo-4-chloroindolyl phosphate hydrolysis protein YP_005539712.1 COG3853 Uncharacterized protein involved in tellurite resistance YP_005539713.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_005539714.1 COG0125 Thymidylate kinase YP_005539715.1 COG3870 Uncharacterized protein conserved in bacteria YP_005539716.1 COG1728 Uncharacterized protein conserved in bacteria YP_005539717.1 COG0470 ATPase involved in DNA replication YP_005539718.1 COG1774 Uncharacterized homolog of PSP1 YP_005539719.1 COG4467 Uncharacterized protein conserved in bacteria YP_005539720.1 COG4123 Predicted O-methyltransferase YP_005539721.1 COG2827 Predicted endonuclease containing a URI domain YP_005539722.1 COG0313 Predicted methyltransferases YP_005539723.1 COG2002 Regulators of stationary/sporulation gene expression YP_005539724.1 COG0143 Methionyl-tRNA synthetase YP_005539725.1 COG0084 Mg-dependent DNase YP_005539726.1 COG3583 Uncharacterized protein conserved in bacteria YP_005539727.1 COG1658 Small primase-like proteins (Toprim domain) YP_005539728.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005539730.1 COG4466 Uncharacterized protein conserved in bacteria YP_005539732.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005539733.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005539734.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005539735.1 COG2088 Uncharacterized protein, involved in the regulation of septum location YP_005539736.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005539737.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005539738.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005539739.1 COG0193 Peptidyl-tRNA hydrolase YP_005539741.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005539742.1 COG2002 Regulators of stationary/sporulation gene expression YP_005539743.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005539744.1 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain YP_005539745.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_005539748.1 COG2919 Septum formation initiator YP_005539749.1 COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) YP_005539750.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005539751.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_005539752.1 COG0515 Serine/threonine protein kinase YP_005539753.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005539754.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_005539755.1 COG0465 ATP-dependent Zn proteases YP_005539756.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_005539757.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_005539758.1 protein secretion PrsA homolog YP_005539759.1 COG0031 Cysteine synthase YP_005539760.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005539761.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005539762.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005539763.1 COG0294 Dihydropteroate synthase and related enzymes YP_005539764.1 COG1539 Dihydroneopterin aldolase YP_005539765.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005539766.1 COG1396 Predicted transcriptional regulators YP_005539767.1 COG0042 tRNA-dihydrouridine synthase YP_005539768.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005539769.1 COG4463 Transcriptional repressor of class III stress genes YP_005539770.1 COG3880 Uncharacterized protein with conserved CXXC pairs YP_005539771.1 COG3869 Arginine kinase YP_005539772.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005539773.1 COG1066 Predicted ATP-dependent serine protease YP_005539774.1 COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) YP_005539775.1 COG4956 Integral membrane protein (PIN domain superfamily) YP_005539776.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005539777.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005539778.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005539779.1 COG1045 Serine acetyltransferase YP_005539780.1 COG0215 Cysteinyl-tRNA synthetase YP_005539781.1 COG1939 Uncharacterized protein conserved in bacteria YP_005539782.1 COG0566 rRNA methylases YP_005539783.1 COG3688 Predicted RNA-binding protein containing a PIN domain YP_005539784.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005539785.1 COG0267 Ribosomal protein L33 YP_005539786.1 COG0690 Preprotein translocase subunit SecE YP_005539787.1 COG0250 Transcription antiterminator YP_005539788.1 COG0080 Ribosomal protein L11 YP_005539789.1 COG0081 Ribosomal protein L1 YP_005539790.1 COG0244 Ribosomal protein L10 YP_005539791.1 COG0222 Ribosomal protein L7/L12 YP_005539792.1 COG2813 16S RNA G1207 methylase RsmC YP_005539793.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005539794.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005539795.1 COG1358 Ribosomal protein HS6-type (S12/L30/L7a) YP_005539796.1 COG0048 Ribosomal protein S12 YP_005539797.1 COG0049 Ribosomal protein S7 YP_005539798.1 COG0480 Translation elongation factors (GTPases) YP_005539799.1 COG0050 GTPases - translation elongation factors YP_005539800.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005539801.1 COG0051 Ribosomal protein S10 YP_005539802.1 COG0087 Ribosomal protein L3 YP_005539803.1 COG0088 Ribosomal protein L4 YP_005539804.1 COG0089 Ribosomal protein L23 YP_005539805.1 COG0090 Ribosomal protein L2 YP_005539806.1 COG0185 Ribosomal protein S19 YP_005539807.1 COG0091 Ribosomal protein L22 YP_005539808.1 COG0092 Ribosomal protein S3 YP_005539809.1 COG0197 Ribosomal protein L16/L10E YP_005539810.1 COG0255 Ribosomal protein L29 YP_005539811.1 COG0186 Ribosomal protein S17 YP_005539812.1 COG0093 Ribosomal protein L14 YP_005539813.1 COG0198 Ribosomal protein L24 YP_005539814.1 COG0094 Ribosomal protein L5 YP_005539815.1 COG0199 Ribosomal protein S14 YP_005539816.1 COG0096 Ribosomal protein S8 YP_005539817.1 COG0097 Ribosomal protein L6P/L9E YP_005539818.1 COG0256 Ribosomal protein L18 YP_005539819.1 COG0098 Ribosomal protein S5 YP_005539820.1 COG1841 Ribosomal protein L30/L7E YP_005539821.1 COG0200 Ribosomal protein L15 YP_005539822.1 COG0201 Preprotein translocase subunit SecY YP_005539823.1 COG0563 Adenylate kinase and related kinases YP_005539824.1 COG0024 Methionine aminopeptidase YP_005539825.1 COG0361 Translation initiation factor 1 (IF-1) YP_005539826.1 COG0257 Ribosomal protein L36 YP_005539827.1 COG0099 Ribosomal protein S13 YP_005539828.1 COG0100 Ribosomal protein S11 YP_005539829.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005539830.1 COG0203 Ribosomal protein L17 YP_005539831.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005539832.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005539833.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters YP_005539834.1 COG0101 Pseudouridylate synthase YP_005539835.1 COG0102 Ribosomal protein L13 YP_005539836.1 COG0103 Ribosomal protein S9 YP_005539837.1 COG0500 SAM-dependent methyltransferases YP_005539839.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005539840.1 COG0489 ATPases involved in chromosome partitioning YP_005539843.1 COG0726 Predicted xylanase/chitin deacetylase YP_005539844.1 COG0477 Permeases of the major facilitator superfamily YP_005539845.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_005539846.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005539847.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005539848.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005539849.1 COG0385 Predicted Na+-dependent transporter YP_005539850.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_005539851.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005539852.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005539853.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005539855.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005539856.1 COG3876 Uncharacterized protein conserved in bacteria YP_005539857.1 COG1472 Beta-glucosidase-related glycosidases YP_005539858.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005539859.1 COG1264 Phosphotransferase system IIB components YP_005539861.1 COG2103 Predicted sugar phosphate isomerase YP_005539862.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005539863.1 COG1683 Uncharacterized conserved protein YP_005539864.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005539865.1 COG0492 Thioredoxin reductase YP_005539866.1 COG1624 Uncharacterized conserved protein YP_005539867.1 COG4856 Uncharacterized protein conserved in bacteria YP_005539868.1 COG1109 Phosphomannomutase YP_005539870.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005539873.1 similar to RBAM_002340 YP_005539875.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005539876.1 COG1346 Putative effector of murein hydrolase YP_005539877.1 COG1380 Putative effector of murein hydrolase LrgA YP_005539878.1 COG1846 Transcriptional regulators YP_005539879.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005539880.1 COG1011 Predicted hydrolase (HAD superfamily) YP_005539881.1 COG4585 Signal transduction histidine kinase YP_005539882.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; similar to RBAM_002490 YP_005539883.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005539884.1 COG0842 ABC-type multidrug transport system, permease component YP_005539885.1 COG0842 ABC-type multidrug transport system, permease component YP_005539887.1 SPBc2 prophage-derived uncharacterized protein YP_005539890.1 COG0531 Amino acid transporters YP_005539892.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005539893.1 COG2271 Sugar phosphate permease YP_005539895.1 COG2368 Aromatic ring hydroxylase YP_005539897.1 COG1476 Predicted transcriptional regulators; similar to RBAM_002670 YP_005539898.1 COG0371 Glycerol dehydrogenase and related enzymes; similar to RBAM_002680 YP_005539899.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) YP_005539900.1 COG1183 Phosphatidylserine synthase YP_005539901.1 COG0586 Uncharacterized membrane-associated protein YP_005539902.1 COG0688 Phosphatidylserine decarboxylase YP_005539904.1 COG1054 Predicted sulfurtransferase YP_005539905.1 COG1301 Na+/H+-dicarboxylate symporters YP_005539906.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005539907.1 COG0833 Amino acid transporters YP_005539908.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_005539909.1 COG1115 Na+/alanine symporter YP_005539910.1 COG2066 Glutaminase YP_005539911.1 COG0642 Signal transduction histidine kinase YP_005539912.1 COG0784 FOG: CheY-like receiver YP_005539913.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005539914.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005539915.1 COG3666 Transposase and inactivated derivatives; similar to RBAM_002850 YP_005539916.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005539917.1 COG0778 Nitroreductase YP_005539918.1 COG0346 Lactoylglutathione lyase and related lyases YP_005539919.1 COG2259 Predicted membrane protein YP_005539920.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005539923.1 COG3773 Cell wall hydrolyses involved in spore germination YP_005539925.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_005539926.1 COG1826 Sec-independent protein secretion pathway components YP_005539927.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005539928.1 COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) YP_005539929.1 COG0520 Selenocysteine lyase YP_005539930.1 COG0477 Permeases of the major facilitator superfamily YP_005539931.1 COG1309 Transcriptional regulator YP_005539932.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_005539933.1 COG1405 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB YP_005539934.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005539938.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_005539939.1 COG0457 FOG: TPR repeat YP_005539940.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005539941.1 COG0366 Glycosidases YP_005539942.1 similar to BL01809 YP_005539943.1 COG1695 Predicted transcriptional regulators; similar to BL01810 YP_005539944.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005539945.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005539946.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005539947.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005539948.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_005539949.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_005539950.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_005539951.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005539953.1 COG3853 Uncharacterized protein involved in tellurite resistance YP_005539954.1 COG0477 Permeases of the major facilitator superfamily YP_005539956.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_005539957.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_005539958.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_005539959.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005539960.1 COG1288 Predicted membrane protein YP_005539962.1 COG1714 Predicted membrane protein/domain YP_005539963.1 COG0039 Malate/lactate dehydrogenases YP_005539964.1 COG0477 Permeases of the major facilitator superfamily YP_005539965.1 COG1846 Transcriptional regulators YP_005539966.1 COG1280 Putative threonine efflux protein YP_005539967.1 COG3403 Uncharacterized conserved protein YP_005539968.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005539969.1 COG3665 Uncharacterized conserved protein YP_005539970.1 COG0171 NAD synthase YP_005539971.1 COG3623 Putative L-xylulose-5-phosphate 3-epimerase; similar to RBAM_003390 YP_005539972.1 COG0477 Permeases of the major facilitator superfamily YP_005539973.1 COG0703 Shikimate kinase YP_005539974.1 COG3458 Acetyl esterase (deacetylase) YP_005539975.1 COG3541 Predicted nucleotidyltransferase YP_005539976.1 COG0506 Proline dehydrogenase YP_005539977.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005539978.1 COG0591 Na+/proline symporter YP_005539979.1 COG2508 Regulator of polyketide synthase expression YP_005539980.1 COG0492 Thioredoxin reductase YP_005539981.1 COG0007 Uroporphyrinogen-III methylase YP_005539982.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_005539983.1 COG1251 NAD(P)H-nitrite reductase YP_005539984.1 COG2223 Nitrate/nitrite transporter YP_005539985.1 COG0523 Putative GTPases (G3E family) YP_005539986.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; similar to RBAM_003560 YP_005539987.1 COG1714 Predicted membrane protein/domain YP_005539989.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005539990.1 COG1946 Acyl-CoA thioesterase YP_005539992.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005539993.1 COG0269 3-hexulose-6-phosphate synthase and related proteins YP_005539994.1 COG1733 Predicted transcriptional regulators YP_005539997.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005539998.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005539999.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005540000.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_005540002.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase; similar to RBAM_003700 YP_005540003.1 COG2091 Phosphopantetheinyl transferase YP_005540004.1 COG2364 Predicted membrane protein YP_005540005.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005540006.1 COG0765 ABC-type amino acid transport system, permease component YP_005540007.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005540008.1 COG0583 Transcriptional regulator YP_005540009.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005540010.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005540013.1 COG3104 Dipeptide/tripeptide permease YP_005540014.1 COG5434 Endopolygalacturonase YP_005540019.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005540020.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005540021.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005540022.1 COG0765 ABC-type amino acid transport system, permease component YP_005540023.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005540024.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005540025.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_005540026.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005540027.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005540028.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005540029.1 COG0642 Signal transduction histidine kinase YP_005540031.1 COG0457 FOG: TPR repeat YP_005540033.1 similar to RBAM_004030 YP_005540034.1 COG0527 Aspartokinases YP_005540035.1 COG4606 ABC-type enterochelin transport system, permease component YP_005540036.1 COG4605 ABC-type enterochelin transport system, permease component YP_005540037.1 COG4604 ABC-type enterochelin transport system, ATPase component YP_005540038.1 COG4607 ABC-type enterochelin transport system, periplasmic component YP_005540039.1 COG0477 Permeases of the major facilitator superfamily YP_005540040.1 COG1309 Transcriptional regulator YP_005540041.1 COG0778 Nitroreductase YP_005540042.1 COG1359 Uncharacterized conserved protein YP_005540043.1 COG0640 Predicted transcriptional regulators YP_005540044.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005540045.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_005540046.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005540047.1 COG4975 Putative glucose uptake permease YP_005540048.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005540049.1 COG4549 Uncharacterized protein conserved in bacteria YP_005540050.1 COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC YP_005540051.1 COG1349 Transcriptional regulators of sugar metabolism YP_005540053.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component YP_005540054.1 COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain YP_005540055.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_005540056.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005540058.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005540059.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_005540060.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_005540061.1 COG4336 Uncharacterized conserved protein YP_005540062.1 COG2049 Allophanate hydrolase subunit 1 YP_005540063.1 COG1984 Allophanate hydrolase subunit 2 YP_005540064.1 COG1414 Transcriptional regulator YP_005540065.1 COG2755 Lysophospholipase L1 and related esterases YP_005540067.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_005540068.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005540069.1 COG4989 Predicted oxidoreductase YP_005540070.1 COG3711 Transcriptional antiterminator YP_005540071.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005540072.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005540073.1 COG3822 ABC-type sugar transport system, auxiliary component YP_005540074.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005540075.1 COG3871 Uncharacterized stress protein (general stress protein 26) YP_005540078.1 COG1522 Transcriptional regulators YP_005540079.1 COG0550 Topoisomerase IA YP_005540080.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005540081.1 COG2199 FOG: GGDEF domain YP_005540082.1 COG5298 Uncharacterized protein conserved in bacteria YP_005540084.1 COG0531 Amino acid transporters YP_005540085.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_005540086.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005540087.1 COG1388 FOG: LysM repeat YP_005540091.1 COG0457 FOG: TPR repeat YP_005540096.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_005540099.1 COG4876 Uncharacterized protein conserved in bacteria YP_005540101.1 COG2076 Membrane transporters of cations and cationic drugs YP_005540103.1 COG3729 General stress protein YP_005540104.1 COG0662 Mannose-6-phosphate isomerase YP_005540106.1 COG3546 Mn-containing catalase YP_005540107.1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component YP_005540108.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005540109.1 COG4565 Response regulator of citrate/malate metabolism YP_005540110.1 COG1301 Na+/H+-dicarboxylate symporters YP_005540111.1 COG0628 Predicted permease YP_005540112.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005540113.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_005540114.1 COG3421 Uncharacterized protein conserved in bacteria YP_005540115.1 COG1960 Acyl-CoA dehydrogenases YP_005540118.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005540119.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005540120.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005540121.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005540123.1 COG0513 Superfamily II DNA and RNA helicases YP_005540124.1 COG3402 Uncharacterized conserved protein YP_005540125.1 COG3428 Predicted membrane protein YP_005540126.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_005540127.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005540128.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005540129.1 COG0787 Alanine racemase YP_005540130.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005540131.1 COG2337 Growth inhibitor YP_005540132.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005540133.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005540134.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_005540135.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005540136.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005540137.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_005540138.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005540139.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005540140.1 COG2183 Transcriptional accessory protein YP_005540142.1 COG3091 Uncharacterized protein conserved in bacteria YP_005540143.1 COG0657 Esterase/lipase YP_005540144.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005540145.1 COG1846 Transcriptional regulators YP_005540147.1 COG1846 Transcriptional regulators YP_005540148.1 COG0477 Permeases of the major facilitator superfamily YP_005540149.1 COG4124 Beta-mannanase YP_005540154.1 COG1959 Predicted transcriptional regulator YP_005540155.1 COG1182 Acyl carrier protein phosphodiesterase YP_005540156.1 COG1278 Cold shock proteins YP_005540158.1 COG1794 Aspartate racemase YP_005540159.1 similar to RBAM_005500 YP_005540160.1 COG1695 Predicted transcriptional regulators; similar to RBAM_005510 YP_005540161.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005540162.1 COG0477 Permeases of the major facilitator superfamily YP_005540163.1 COG3621 Patatin YP_005540164.1 similar to RBAM_005570 YP_005540165.1 COG0277 FAD/FMN-containing dehydrogenases YP_005540166.1 COG0346 Lactoylglutathione lyase and related lyases; similar to RBAM_005590 YP_005540167.1 COG1230 Co/Zn/Cd efflux system component YP_005540168.1 COG0586 Uncharacterized membrane-associated protein YP_005540169.1 COG0662 Mannose-6-phosphate isomerase YP_005540170.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005540171.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005540172.1 similar to RBAM_005650 YP_005540173.1 COG0820 Predicted Fe-S-cluster redox enzyme; similar to RBAM_005660 YP_005540175.1 COG0798 Arsenite efflux pump ACR3 and related permeases; similar to RBAM_005730 YP_005540176.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005540177.1 COG0789 Predicted transcriptional regulators YP_005540179.1 COG1757 Na+/H+ antiporter; similar to RBAM_005760; similar to RBAM_005760 YP_005540180.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; similar to RBAM_005770 YP_005540181.1 COG2808 Transcriptional regulator; similar to RBAM_005780 YP_005540183.1 COG0477 Permeases of the major facilitator superfamily YP_005540184.1 COG1309 Transcriptional regulator YP_005540185.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005540186.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005540187.1 COG5577 Spore coat protein YP_005540189.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005540190.1 COG5577 Spore coat protein YP_005540192.1 COG2409 Predicted drug exporters of the RND superfamily YP_005540193.1 COG2071 Predicted glutamine amidotransferases; similar to RBAM_005950 YP_005540194.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005540195.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005540196.1 COG1284 Uncharacterized conserved protein; similar to RBAM_005980 YP_005540197.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005540198.1 COG0477 Permeases of the major facilitator superfamily YP_005540199.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; similar to RBAM_006010 YP_005540200.1 COG1396 Predicted transcriptional regulators; similar to RBAM_006020; similar to RBAM_006020 YP_005540201.1 COG0730 Predicted permeases YP_005540202.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005540203.1 COG0789 Predicted transcriptional regulators YP_005540204.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005540206.1 COG1051 ADP-ribose pyrophosphatase YP_005540207.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005540208.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005540209.1 COG1802 Transcriptional regulators YP_005540210.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_005540211.1 similar to RBAM_006130 YP_005540212.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005540215.1 COG2814 Arabinose efflux permease YP_005540216.1 COG2188 Transcriptional regulators YP_005540217.1 COG2186 Transcriptional regulators; similar to RBAM_006180; similar to RBAM_006180 YP_005540218.1 COG2807 Cyanate permease YP_005540219.1 COG2076 Membrane transporters of cations and cationic drugs YP_005540220.1 COG2076 Membrane transporters of cations and cationic drugs YP_005540221.1 COG1309 Transcriptional regulator YP_005540222.1 COG0531 Amino acid transporters YP_005540223.1 COG3546 Mn-containing catalase YP_005540224.1 COG3832 Uncharacterized conserved protein YP_005540225.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005540226.1 COG0477 Permeases of the major facilitator superfamily YP_005540227.1 COG0611 Thiamine monophosphate kinase YP_005540228.1 COG0802 Predicted ATPase or kinase YP_005540229.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005540230.1 COG0456 Acetyltransferases YP_005540231.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005540232.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005540233.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_005540234.1 COG2344 AT-rich DNA-binding protein YP_005540235.1 COG1826 Sec-independent protein secretion pathway components YP_005540236.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005540238.1 COG1266 Predicted metal-dependent membrane protease YP_005540239.1 COG0234 Co-chaperonin GroES (HSP10) YP_005540240.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005540241.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_005540243.1 COG1131 ABC-type multidrug transport system, ATPase component; similar to RBAM_006520 YP_005540244.1 COG0714 MoxR-like ATPases YP_005540245.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005540246.1 COG2211 Na+/melibiose symporter and related transporters YP_005540247.1 COG0524 Sugar kinases, ribokinase family YP_005540249.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_005540251.1 COG1512 Beta-propeller domains of methanol dehydrogenase type YP_005540252.1 COG4260 Putative virion core protein (lumpy skin disease virus) YP_005540253.1 COG1835 Predicted acyltransferases YP_005540255.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005540256.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005540258.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005540259.1 similar to RBAM_006680 YP_005540261.1 COG2132 Putative multicopper oxidases YP_005540262.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005540264.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005540265.1 COG0714 MoxR-like ATPases YP_005540266.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_005540267.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_005540268.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005540269.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; similar to RBAM_006770 YP_005540270.1 similar to RBAM_006780 YP_005540271.1 COG2252 Permeases YP_005540274.1 COG4843 Uncharacterized protein conserved in bacteria YP_005540276.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_005540277.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_005540278.1 COG0015 Adenylosuccinate lyase YP_005540279.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_005540280.1 COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component YP_005540281.1 COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain YP_005540282.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_005540283.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_005540284.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_005540285.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_005540286.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_005540287.1 COG0151 Phosphoribosylamine-glycine ligase YP_005540288.1 COG1522 Transcriptional regulators YP_005540289.1 COG0531 Amino acid transporters YP_005540291.1 COG1001 Adenine deaminase YP_005540293.1 COG4496 Uncharacterized protein conserved in bacteria YP_005540294.1 COG0069 Glutamate synthase domain 2 YP_005540296.1 COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold YP_005540297.1 COG0210 Superfamily I DNA and RNA helicases YP_005540298.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005540299.1 COG4851 Protein involved in sex pheromone biosynthesis YP_005540300.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_005540301.1 COG1285 Uncharacterized membrane protein YP_005540302.1 COG0591 Na+/proline symporter YP_005540303.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005540304.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005540305.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005540306.1 COG1309 Transcriptional regulator YP_005540307.1 COG0841 Cation/multidrug efflux pump YP_005540308.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_005540309.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005540310.1 COG3973 Superfamily I DNA and RNA helicases YP_005540311.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005540312.1 COG0842 ABC-type multidrug transport system, permease component YP_005540313.1 similar to RBAM_011970 YP_005540314.1 COG0217 Uncharacterized conserved protein YP_005540319.1 COG3546 Mn-containing catalase YP_005540320.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005540321.1 similar to RBAM_007280 YP_005540322.1 COG2323 Predicted membrane protein YP_005540323.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_005540324.1 COG0346 Lactoylglutathione lyase and related lyases YP_005540325.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005540326.1 COG5583 Uncharacterized small protein YP_005540327.1 similar to RBAM_007340; similar to RBAM_007340 YP_005540328.1 COG0670 Integral membrane protein, interacts with FtsH YP_005540329.1 COG1846 Transcriptional regulators YP_005540330.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005540332.1 COG2124 Cytochrome P450 YP_005540334.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005540335.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_005540336.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005540338.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005540340.1 COG0477 Permeases of the major facilitator superfamily YP_005540341.1 COG0531 Amino acid transporters YP_005540342.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005540343.1 COG0840 Methyl-accepting chemotaxis protein YP_005540344.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); similar to RBAM_007620; similar to RBAM_007620 YP_005540345.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005540346.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005540347.1 COG0789 Predicted transcriptional regulators YP_005540348.1 COG0477 Permeases of the major facilitator superfamily YP_005540349.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005540350.1 COG0513 Superfamily II DNA and RNA helicases YP_005540351.1 COG2130 Putative NADP-dependent oxidoreductases YP_005540354.1 COG3866 Pectate lyase YP_005540355.1 COG0471 Di- and tricarboxylate transporters YP_005540356.1 similar to RBAM_007760 YP_005540359.1 COG0642 Signal transduction histidine kinase YP_005540360.1 COG3947 Response regulator containing CheY-like receiver and SARP domains YP_005540361.1 COG4932 Predicted outer membrane protein YP_005540362.1 COG3764 Sortase (surface protein transpeptidase) YP_005540363.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005540364.1 COG4565 Response regulator of citrate/malate metabolism YP_005540365.1 COG3181 Uncharacterized protein conserved in bacteria YP_005540367.1 COG2851 H+/citrate symporter YP_005540368.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005540369.1 COG4362 Nitric oxide synthase, oxygenase domain YP_005540370.1 COG1254 Acylphosphatases YP_005540371.1 COG2258 Uncharacterized protein conserved in bacteria YP_005540375.1 COG0024 Methionine aminopeptidase YP_005540376.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005540378.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005540380.1 COG0071 Molecular chaperone (small heat shock protein) YP_005540383.1 COG1264 Phosphotransferase system IIB components YP_005540384.1 COG0366 Glycosidases YP_005540385.1 COG2188 Transcriptional regulators YP_005540386.1 COG0778 Nitroreductase YP_005540387.1 COG5438 Predicted multitransmembrane protein; similar to RBAM_008010 YP_005540388.1 COG5438 Predicted multitransmembrane protein; similar to RBAM_008020 YP_005540389.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005540390.1 COG0693 Putative intracellular protease/amidase YP_005540391.1 COG1609 Transcriptional regulators; similar to RBAM_008050 YP_005540392.1 COG0169 Shikimate 5-dehydrogenase; similar to RBAM_008070 YP_005540393.1 COG0710 3-dehydroquinate dehydratase YP_005540394.1 COG0477 Permeases of the major facilitator superfamily YP_005540395.1 COG4840 Uncharacterized protein conserved in bacteria YP_005540396.1 COG0394 Protein-tyrosine-phosphatase YP_005540398.1 COG1295 Predicted membrane protein YP_005540400.1 COG0477 Permeases of the major facilitator superfamily YP_005540401.1 COG0387 Ca2+/H+ antiporter YP_005540403.1 COG0668 Small-conductance mechanosensitive channel YP_005540404.1 COG0535 Predicted Fe-S oxidoreductases YP_005540406.1 COG0726 Predicted xylanase/chitin deacetylase YP_005540407.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005540409.1 COG0598 Mg2+ and Co2+ transporters YP_005540410.1 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase YP_005540412.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005540414.1 COG1404 Subtilisin-like serine proteases YP_005540415.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005540416.1 COG0515 Serine/threonine protein kinase; S6K-alpha 6-like protein YP_005540423.1 COG0042 tRNA-dihydrouridine synthase YP_005540425.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005540426.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005540427.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005540428.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005540429.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_005540431.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_005540432.1 COG1737 Transcriptional regulators YP_005540433.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005540435.1 COG5434 Endopolygalacturonase; similar to RBAM_008390 YP_005540436.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005540437.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005540438.1 COG2259 Predicted membrane protein YP_005540439.1 COG2514 Predicted ring-cleavage extradiol dioxygenase YP_005540441.1 COG1695 Predicted transcriptional regulators YP_005540442.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); similar to RBAM_008460 YP_005540443.1 COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation YP_005540445.1 COG2732 Barstar, RNAse (barnase) inhibitor YP_005540447.1 COG0477 Permeases of the major facilitator superfamily YP_005540448.1 COG1846 Transcriptional regulators YP_005540449.1 COG0392 Predicted integral membrane protein YP_005540450.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_005540451.1 COG0778 Nitroreductase YP_005540454.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_005540455.1 COG2137 Uncharacterized protein conserved in bacteria YP_005540457.1 COG2814 Arabinose efflux permease YP_005540458.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005540459.1 COG3591 V8-like Glu-specific endopeptidase YP_005540462.1 COG4991 Uncharacterized protein with a bacterial SH3 domain homologue YP_005540464.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005540465.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005540466.1 COG4485 Predicted membrane protein YP_005540467.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_005540468.1 COG1194 A/G-specific DNA glycosylase YP_005540470.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005540473.1 COG3557 Uncharacterized domain/protein associated with RNAses G and E YP_005540474.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005540475.1 COG4129 Predicted membrane protein YP_005540476.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005540477.1 COG1225 Peroxiredoxin YP_005540478.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005540479.1 COG4174 ABC-type uncharacterized transport system, permease component YP_005540482.1 COG1757 Na+/H+ antiporter; similar to RBAM_009040 YP_005540483.1 COG3340 Peptidase E YP_005540484.1 COG0422 Thiamine biosynthesis protein ThiC YP_005540485.1 COG0277 FAD/FMN-containing dehydrogenases YP_005540487.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005540488.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005540489.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005540490.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005540491.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005540492.1 COG0753 Catalase YP_005540493.1 COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold; similar to RBAM_009100 YP_005540494.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005540495.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005540496.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005540497.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005540500.1 COG0199 Ribosomal protein S14 YP_005540502.1 COG1476 Predicted transcriptional regulators YP_005540503.1 COG3382 Uncharacterized conserved protein YP_005540504.1 COG1600 Uncharacterized Fe-S protein YP_005540506.1 COG0219 Predicted rRNA methylase (SpoU class) YP_005540508.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005540509.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005540510.1 COG2766 Putative Ser protein kinase YP_005540511.1 COG2718 Uncharacterized conserved protein YP_005540512.1 COG1846 Transcriptional regulators YP_005540513.1 COG1566 Multidrug resistance efflux pump YP_005540514.1 COG0477 Permeases of the major facilitator superfamily YP_005540515.1 COG0655 Multimeric flavodoxin WrbA YP_005540518.1 COG1725 Predicted transcriptional regulators YP_005540519.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005540520.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005540521.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_005540522.1 COG1278 Cold shock proteins YP_005540523.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005540524.1 COG2199 FOG: GGDEF domain YP_005540525.1 COG1823 Predicted Na+/dicarboxylate symporter YP_005540526.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005540530.1 COG5577 Spore coat protein YP_005540531.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005540532.1 COG3764 Sortase (surface protein transpeptidase) YP_005540533.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005540535.1 COG0517 FOG: CBS domain YP_005540536.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005540537.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005540538.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005540539.1 COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) YP_005540540.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_005540541.1 COG0554 Glycerol kinase YP_005540542.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_005540543.1 COG1109 Phosphomannomutase YP_005540544.1 COG2203 FOG: GAF domain YP_005540545.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005540546.1 COG0431 Predicted flavoprotein YP_005540549.1 COG1388 FOG: LysM repeat YP_005540550.1 COG1959 Predicted transcriptional regulator YP_005540551.1 COG0668 Small-conductance mechanosensitive channel YP_005540552.1 COG2719 Uncharacterized conserved protein YP_005540553.1 COG1785 Alkaline phosphatase YP_005540555.1 COG1388 FOG: LysM repeat YP_005540556.1 COG0583 Transcriptional regulator YP_005540557.1 COG0372 Citrate synthase YP_005540558.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005540559.1 COG0531 Amino acid transporters YP_005540560.1 COG0733 Na+-dependent transporters of the SNF family YP_005540563.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005540564.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005540565.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005540566.1 COG0789 Predicted transcriptional regulators YP_005540567.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005540568.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005540569.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005540570.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005540571.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005540572.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005540574.1 COG0668 Small-conductance mechanosensitive channel YP_005540575.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005540576.1 COG0726 Predicted xylanase/chitin deacetylase YP_005540577.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005540578.1 COG1309 Transcriptional regulator YP_005540580.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005540582.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; , also involved in the signaling pathway to activate KinA at the onset of sporulation YP_005540583.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; involved in the signaling pathway that activates KinA during sporulation initiation YP_005540584.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005540589.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_005540590.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_005540591.1 COG4399 Uncharacterized protein conserved in bacteria YP_005540592.1 COG3679 Uncharacterized conserved protein YP_005540594.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005540595.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005540596.1 COG3486 Lysine/ornithine N-monooxygenase; similar to RBAM_010080 YP_005540597.1 COG0475 Kef-type K+ transport systems, membrane components YP_005540598.1 COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels YP_005540600.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005540602.1 COG4152 ABC-type uncharacterized transport system, ATPase component YP_005540603.1 COG1668 ABC-type Na+ efflux pump, permease component YP_005540604.1 COG0420 DNA repair exonuclease YP_005540605.1 COG4717 Uncharacterized conserved protein YP_005540606.1 COG3481 Predicted HD-superfamily hydrolase YP_005540608.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005540612.1 COG1846 Transcriptional regulators YP_005540613.1 COG4980 Gas vesicle protein YP_005540616.1 COG1932 Phosphoserine aminotransferase YP_005540617.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005540618.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005540619.1 COG4473 Predicted ABC-type exoprotein transport system, permease component YP_005540621.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005540622.1 COG3069 C4-dicarboxylate transporter YP_005540623.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_005540624.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005540625.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005540626.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005540627.1 COG1232 Protoporphyrinogen oxidase YP_005540628.1 COG1309 Transcriptional regulator YP_005540629.1 COG1511 Predicted membrane protein YP_005540630.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005540632.1 COG1363 Cellulase M and related proteins YP_005540633.1 COG1301 Na+/H+-dicarboxylate symporters YP_005540635.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_005540636.1 COG0095 Lipoate-protein ligase A YP_005540637.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005540638.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005540640.1 COG0501 Zn-dependent protease with chaperone function YP_005540641.1 COG1404 Subtilisin-like serine proteases YP_005540642.1 COG4594 ABC-type Fe3+-citrate transport system, periplasmic component YP_005540643.1 COG0406 Fructose-2,6-bisphosphatase YP_005540644.1 COG0183 Acetyl-CoA acetyltransferase YP_005540645.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005540646.1 COG1268 Uncharacterized conserved protein YP_005540647.1 COG0840 Methyl-accepting chemotaxis protein YP_005540648.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005540649.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005540651.1 COG4903 Genetic competence transcription factor YP_005540652.1 COG5646 Uncharacterized conserved protein YP_005540653.1 COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases YP_005540656.1 COG0393 Uncharacterized conserved protein; similar to RBAM_010660 YP_005540657.1 COG0591 Na+/proline symporter YP_005540660.1 COG0398 Uncharacterized conserved protein YP_005540661.1 COG0681 Signal peptidase I YP_005540662.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005540663.1 COG1846 Transcriptional regulators YP_005540664.1 COG3180 Putative ammonia monooxygenase YP_005540665.1 COG0477 Permeases of the major facilitator superfamily YP_005540666.1 COG1309 Transcriptional regulator; similar to RBAM_010760; similar to RBAM_010760 YP_005540667.1 COG1633 Uncharacterized conserved protein YP_005540668.1 COG2323 Predicted membrane protein YP_005540669.1 COG3857 ATP-dependent nuclease, subunit B YP_005540670.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005540671.1 COG0420 DNA repair exonuclease YP_005540672.1 COG0419 ATPase involved in DNA repair YP_005540673.1 COG1403 Restriction endonuclease YP_005540683.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_005540685.1 COG1404 Subtilisin-like serine proteases YP_005540687.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_005540688.1 COG1562 Phytoene/squalene synthetase YP_005540689.1 COG0534 Na+-driven multidrug efflux pump YP_005540690.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005540691.1 COG1609 Transcriptional regulators YP_005540692.1 COG0673 Predicted dehydrogenases and related proteins YP_005540693.1 COG2318 Uncharacterized protein conserved in bacteria YP_005540694.1 COG1279 Lysine efflux permease YP_005540695.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005540696.1 COG1357 Uncharacterized low-complexity proteins YP_005540697.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005540698.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_005540699.1 COG1666 Uncharacterized protein conserved in bacteria YP_005540700.1 COG2996 Uncharacterized protein conserved in bacteria YP_005540701.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein; similar to RBAM_011050; similar to RBAM_011050 YP_005540702.1 COG0840 Methyl-accepting chemotaxis protein; similar to RBAM_011060 YP_005540703.1 COG2124 Cytochrome P450 YP_005540705.1 COG1307 Uncharacterized protein conserved in bacteria YP_005540706.1 COG1284 Uncharacterized conserved protein YP_005540708.1 similar to RBAM_011110 YP_005540709.1 similar to RBAM_011120 YP_005540710.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005540711.1 COG1073 Hydrolases of the alpha/beta superfamily YP_005540712.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_005540713.1 COG0346 Lactoylglutathione lyase and related lyases YP_005540714.1 COG0277 FAD/FMN-containing dehydrogenases YP_005540715.1 COG1015 Phosphopentomutase YP_005540716.1 COG0005 Purine nucleoside phosphorylase YP_005540718.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005540719.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005540720.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_005540721.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005540725.1 COG0183 Acetyl-CoA acetyltransferase YP_005540729.1 COG0019 Diaminopimelate decarboxylase YP_005540730.1 COG4086 Predicted secreted protein YP_005540732.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005540733.1 COG4846 Membrane protein involved in cytochrome C biogenesis; similar to RBAM_021450 YP_005540734.1 COG0681 Signal peptidase I YP_005540737.1 COG0117 Pyrimidine deaminase YP_005540738.1 COG0307 Riboflavin synthase alpha chain YP_005540739.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005540740.1 COG0054 Riboflavin synthase beta-chain YP_005540741.1 COG0456 Acetyltransferases YP_005540743.1 COG1547 Uncharacterized conserved protein YP_005540744.1 COG1354 Uncharacterized conserved protein YP_005540745.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_005540747.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005540748.1 COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. YP_005540749.1 COG0700 Uncharacterized membrane protein YP_005540750.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005540751.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005540752.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_005540753.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005540754.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005540755.1 COG0642 Signal transduction histidine kinase YP_005540756.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005540758.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005540759.1 COG3601 Predicted membrane protein YP_005540761.1 COG1141 Ferredoxin YP_005540762.1 COG4955 Uncharacterized protein conserved in bacteria YP_005540763.1 COG0514 Superfamily II DNA helicase YP_005540764.1 COG1266 Predicted metal-dependent membrane protease YP_005540766.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005540768.1 COG1408 Predicted phosphohydrolases YP_005540769.1 COG4862 Negative regulator of genetic competence, sporulation and motility YP_005540770.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005540771.1 COG0492 Thioredoxin reductase YP_005540772.1 COG2339 Predicted membrane protein YP_005540773.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_005540775.1 COG5581 Predicted glycosyltransferase YP_005540777.1 COG0283 Cytidylate kinase YP_005540778.1 COG0539 Ribosomal protein S1 YP_005540779.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005540783.1 COG1160 Predicted GTPases YP_005540784.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005540788.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005540789.1 COG0302 GTP cyclohydrolase I YP_005540792.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005540793.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005540794.1 COG0105 Nucleoside diphosphate kinase YP_005540795.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_005540796.1 COG0082 Chorismate synthase YP_005540797.1 COG0337 3-dehydroquinate synthetase YP_005540798.1 COG4401 Chorismate mutase YP_005540799.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005540800.1 COG0547 Anthranilate phosphoribosyltransferase YP_005540801.1 COG0134 Indole-3-glycerol phosphate synthase YP_005540802.1 COG0135 Phosphoribosylanthranilate isomerase YP_005540803.1 COG0133 Tryptophan synthase beta chain YP_005540804.1 COG0159 Tryptophan synthase alpha chain YP_005540805.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_005540806.1 COG0287 Prephenate dehydrogenase YP_005540807.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005540808.1 COG0457 FOG: TPR repeat YP_005540809.1 COG5582 Uncharacterized conserved protein YP_005540811.1 COG0723 Rieske Fe-S protein YP_005540812.1 COG1290 Cytochrome b subunit of the bc complex YP_005540813.1 COG1290 Cytochrome b subunit of the bc complex YP_005540814.1 COG4347 Predicted membrane protein YP_005540816.1 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes YP_005540817.1 COG1284 Uncharacterized conserved protein YP_005540818.1 COG1694 Predicted pyrophosphatase YP_005540819.1 COG0289 Dihydrodipicolinate reductase YP_005540820.1 COG1803 Methylglyoxal synthase YP_005540821.1 COG2120 Uncharacterized proteins, LmbE homologs YP_005540822.1 COG0438 Glycosyltransferase YP_005540823.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005540824.1 COG1654 Biotin operon repressor YP_005540825.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005540826.1 COG0414 Panthothenate synthetase YP_005540827.1 COG0853 Aspartate 1-decarboxylase YP_005540828.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005540830.1 COG5353 Uncharacterized protein conserved in bacteria YP_005540831.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005540832.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_005540833.1 COG3935 Putative primosome component and related proteins YP_005540834.1 COG0177 Predicted EndoIII-related endonuclease YP_005540836.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005540837.1 COG3331 Penicillin-binding protein-related factor A, putative recombinase YP_005540845.1 COG2190 Phosphotransferase system IIA components YP_005540846.1 COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster YP_005540847.1 COG3359 Predicted exonuclease YP_005540850.1 COG4474 Uncharacterized protein conserved in bacteria YP_005540851.1 COG3599 Cell division initiation protein YP_005540852.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_005540854.1 similar to RBAM_020300 YP_005540856.1 COG1199 Rad3-related DNA helicases YP_005540857.1 COG2317 Zn-dependent carboxypeptidase YP_005540858.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005540859.1 COG2233 Xanthine/uracil permeases YP_005540860.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005540861.1 COG1525 Micrococcal nuclease (thermonuclease) homologs YP_005540862.1 COG4282 Protein involved in beta-1,3-glucan synthesis YP_005540869.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005540873.1 COG5546 Small integral membrane protein YP_005540875.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005540876.1 COG5434 Endopolygalacturonase YP_005540880.1 COG4722 Phage-related protein YP_005540884.1 COG0515 Serine/threonine protein kinase YP_005540887.1 COG0582 Integrase YP_005540890.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005540903.1 COG0013 Alanyl-tRNA synthetase YP_005540906.1 COG1372 Intein/homing endonuclease YP_005540913.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005540914.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005540917.1 COG1476 Predicted transcriptional regulators YP_005540919.1 COG0206 Cell division GTPase YP_005540926.1 COG0210 Superfamily I DNA and RNA helicases YP_005540927.1 COG3646 Uncharacterized phage-encoded protein YP_005540928.1 COG0328 Ribonuclease HI YP_005540932.1 COG1835 Predicted acyltransferases YP_005540938.1 COG0148 Enolase YP_005540955.1 COG1396 Predicted transcriptional regulators YP_005540956.1 COG0582 Integrase YP_005540968.1 COG3646 Uncharacterized phage-encoded protein YP_005540973.1 COG0863 DNA modification methylase YP_005540983.1 COG1793 ATP-dependent DNA ligase YP_005540984.1 COG2135 Uncharacterized conserved protein YP_005540991.1 COG4195 Phage-related replication protein YP_005540993.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_005541000.1 COG0358 DNA primase (bacterial type) YP_005541001.1 COG0608 Single-stranded DNA-specific exonuclease YP_005541002.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_005541003.1 COG3584 Uncharacterized protein conserved in bacteria YP_005541008.1 COG0125 Thymidylate kinase YP_005541009.1 COG4502 Uncharacterized protein conserved in bacteria YP_005541011.1 COG0270 Site-specific DNA methylase YP_005541025.1 COG4728 Uncharacterized protein conserved in bacteria YP_005541028.1 COG1780 Protein involved in ribonucleotide reduction YP_005541029.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005541030.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005541031.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005541033.1 COG0208 Ribonucleotide reductase, beta subunit YP_005541035.1 COG0208 Ribonucleotide reductase, beta subunit YP_005541039.1 COG1990 Uncharacterized conserved protein YP_005541040.1 COG0756 dUTPase YP_005541045.1 COG0207 Thymidylate synthase YP_005541046.1 COG0262 Dihydrofolate reductase YP_005541052.1 COG1396 Predicted transcriptional regulators YP_005541053.1 COG3331 Penicillin-binding protein-related factor A, putative recombinase YP_005541055.1 COG2233 Xanthine/uracil permeases YP_005541057.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase; similar to RBAM_020220 YP_005541058.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; similar to RBAM_020210 YP_005541060.1 COG3424 Predicted naringenin-chalcone synthase YP_005541061.1 COG1755 Uncharacterized protein conserved in bacteria YP_005541062.1 COG0699 Predicted GTPases (dynamin-related) YP_005541064.1 similar to RBAM_020160 YP_005541065.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005541067.1 COG0328 Ribonuclease HI YP_005541068.1 COG1738 Uncharacterized conserved protein YP_005541069.1 COG0328 Ribonuclease HI YP_005541073.1 COG1278 Cold shock proteins YP_005541075.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005541076.1 COG1897 Homoserine trans-succinylase YP_005541078.1 COG0386 Glutathione peroxidase YP_005541079.1 COG1418 Predicted HD superfamily hydrolase YP_005541080.1 COG0694 Thioredoxin-like proteins and domains YP_005541081.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005541083.1 COG0500 SAM-dependent methyltransferases YP_005541085.1 COG0207 Thymidylate synthase YP_005541086.1 COG0262 Dihydrofolate reductase YP_005541087.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005541088.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_005541089.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_005541090.1 COG1171 Threonine dehydratase YP_005541092.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005541093.1 COG2755 Lysophospholipase L1 and related esterases YP_005541094.1 COG4698 Uncharacterized protein conserved in bacteria YP_005541095.1 COG1846 Transcriptional regulators YP_005541096.1 COG0225 Peptide methionine sulfoxide reductase YP_005541097.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_005541098.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005541101.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005541104.1 COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_005541105.1 COG4641 Uncharacterized protein conserved in bacteria YP_005541107.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005541108.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005541109.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005541112.1 COG3449 DNA gyrase inhibitor YP_005541114.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005541115.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005541116.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005541117.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005541118.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005541119.1 COG1509 Lysine 2,3-aminomutase YP_005541120.1 COG1062 Zn-dependent alcohol dehydrogenases, class III YP_005541121.1 COG4479 Uncharacterized protein conserved in bacteria YP_005541122.1 COG0346 Lactoylglutathione lyase and related lyases; similar to RBAM_019490 YP_005541124.1 similar to RBAM_019470 YP_005541126.1 COG0671 Membrane-associated phospholipid phosphatase YP_005541128.1 similar to RBAM_019430 YP_005541129.1 COG0813 Purine-nucleoside phosphorylase YP_005541130.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_005541132.1 COG0500 SAM-dependent methyltransferases YP_005541133.1 COG0793 Periplasmic protease YP_005541134.1 COG2188 Transcriptional regulators YP_005541135.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005541136.1 COG5520 O-Glycosyl hydrolase; similar to RBAM_019350 YP_005541137.1 COG0591 Na+/proline symporter YP_005541139.1 COG0346 Lactoylglutathione lyase and related lyases YP_005541140.1 COG0400 Predicted esterase YP_005541141.1 COG0778 Nitroreductase YP_005541142.1 COG1733 Predicted transcriptional regulators YP_005541145.1 similar to RBAM_019270 YP_005541146.1 COG0071 Molecular chaperone (small heat shock protein) YP_005541147.1 COG2962 Predicted permeases YP_005541148.1 similar to RBAM_019240 YP_005541149.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005541150.1 COG2120 Uncharacterized proteins, LmbE homologs YP_005541151.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005541152.1 COG0534 Na+-driven multidrug efflux pump YP_005541154.1 COG1624 Uncharacterized conserved protein YP_005541155.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_005541157.1 COG1388 FOG: LysM repeat YP_005541158.1 COG2032 Cu/Zn superoxide dismutase YP_005541159.1 COG0714 MoxR-like ATPases YP_005541160.1 COG4548 Nitric oxide reductase activation protein YP_005541161.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005541162.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005541163.1 COG0491 Zn-dependent hydrolases, including glyoxylases; similar to RBAM_019110 YP_005541164.1 COG0385 Predicted Na+-dependent transporter YP_005541165.1 COG0733 Na+-dependent transporters of the SNF family YP_005541166.1 COG0605 Superoxide dismutase YP_005541167.1 COG1657 Squalene cyclase YP_005541168.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005541174.1 COG0071 Molecular chaperone (small heat shock protein) YP_005541175.1 similar to RBAM_018990 YP_005541177.1 COG1734 DnaK suppressor protein YP_005541178.1 COG1182 Acyl carrier protein phosphodiesterase YP_005541180.1 COG0514 Superfamily II DNA helicase YP_005541181.1 COG1388 FOG: LysM repeat YP_005541182.1 similar to RBAM_018950 YP_005541183.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005541186.1 COG2322 Predicted membrane protein YP_005541187.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005541188.1 COG0640 Predicted transcriptional regulators YP_005541190.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005541191.1 COG1309 Transcriptional regulator YP_005541192.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005541193.1 COG0073 EMAP domain YP_005541194.1 COG5294 Uncharacterized protein conserved in bacteria YP_005541196.1 COG1846 Transcriptional regulators YP_005541199.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005541200.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005541201.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005541202.1 COG0477 Permeases of the major facilitator superfamily YP_005541205.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005541207.1 COG0345 Pyrroline-5-carboxylate reductase YP_005541208.1 COG0263 Glutamate 5-kinase YP_005541209.1 COG0583 Transcriptional regulator YP_005541210.1 COG0067 Glutamate synthase domain 1 YP_005541211.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_005541213.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005541214.1 COG0583 Transcriptional regulator YP_005541215.1 COG0441 Threonyl-tRNA synthetase YP_005541216.1 COG0640 Predicted transcriptional regulators; similar to RBAM_18560 YP_005541217.1 COG2814 Arabinose efflux permease YP_005541218.1 COG0405 Gamma-glutamyltransferase YP_005541221.1 COG0582 Integrase; similar to RBAM_018520 YP_005541225.1 COG0534 Na+-driven multidrug efflux pump YP_005541226.1 COG2017 Galactose mutarotase and related enzymes YP_005541227.1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) YP_005541229.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005541230.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005541232.1 COG1649 Uncharacterized protein conserved in bacteria YP_005541233.1 COG1960 Acyl-CoA dehydrogenases YP_005541234.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005541235.1 COG0439 Biotin carboxylase YP_005541236.1 COG0511 Biotin carboxyl carrier protein; similar to RBAM_018360 YP_005541237.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_005541238.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005541239.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005541240.1 COG0586 Uncharacterized membrane-associated protein YP_005541241.1 COG1210 UDP-glucose pyrophosphorylase YP_005541242.1 COG2246 Predicted membrane protein YP_005541243.1 COG1424 Pimeloyl-CoA synthetase YP_005541244.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005541245.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005541246.1 COG0132 Dethiobiotin synthetase YP_005541247.1 COG0502 Biotin synthase and related enzymes YP_005541248.1 COG2124 Cytochrome P450 YP_005541249.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005541250.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005541251.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005541252.1 COG2721 Altronate dehydratase YP_005541253.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005541254.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005541255.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005541256.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005541259.1 COG5520 O-Glycosyl hydrolase YP_005541260.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005541261.1 COG0642 Signal transduction histidine kinase YP_005541262.1 similar to RBAM_018110 YP_005541269.1 COG1115 Na+/alanine symporter YP_005541271.1 similar to RBAM_017920 YP_005541272.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005541273.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005541274.1 COG1832 Predicted CoA-binding protein YP_005541275.1 COG0344 Predicted membrane protein YP_005541276.1 COG4841 Uncharacterized protein conserved in bacteria YP_005541278.1 COG0824 Predicted thioesterase YP_005541281.1 similar to RBAM_017820 YP_005541282.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005541283.1 COG1048 Aconitase A YP_005541286.1 COG0071 Molecular chaperone (small heat shock protein) YP_005541288.1 COG4846 Membrane protein involved in cytochrome C biogenesis YP_005541289.1 COG0784 FOG: CheY-like receiver YP_005541290.1 COG0785 Cytochrome c biogenesis protein YP_005541292.1 COG3763 Uncharacterized protein conserved in bacteria YP_005541294.1 COG0021 Transketolase YP_005541295.1 COG4224 Uncharacterized protein conserved in bacteria YP_005541296.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005541297.1 COG1388 FOG: LysM repeat YP_005541298.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_005541299.1 similar to RBAM_017640 YP_005541301.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; similar to RBAM_017620 YP_005541303.1 COG4195 Phage-related replication protein YP_005541305.1 COG0756 dUTPase YP_005541306.1 COG2314 Predicted membrane protein YP_005541309.1 similar to RBAM_017570 YP_005541310.1 COG3397 Uncharacterized protein conserved in bacteria; similar to RBAM_017540 YP_005541312.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; similar to RBAM_017530 YP_005541315.1 similar to RBAM_017490 YP_005541317.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; similar to RBAM_017480 YP_005541318.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005541323.1 COG1064 Zn-dependent alcohol dehydrogenases; similar to RBAM_017440 YP_005541324.1 COG2318 Uncharacterized protein conserved in bacteria YP_005541326.1 similar to RBAM_017400 YP_005541328.1 COG0457 FOG: TPR repeat YP_005541329.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005541330.1 COG1309 Transcriptional regulator YP_005541331.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005541333.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005541334.1 COG2115 Xylose isomerase YP_005541335.1 COG1940 Transcriptional regulator/sugar kinase YP_005541336.1 COG3507 Beta-xylosidase YP_005541337.1 COG2211 Na+/melibiose symporter and related transporters YP_005541338.1 COG2124 Cytochrome P450 YP_005541345.1 COG0174 Glutamine synthetase YP_005541346.1 COG0789 Predicted transcriptional regulators YP_005541347.1 COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance YP_005541348.1 COG2262 GTPases YP_005541349.1 COG0464 ATPases of the AAA+ class YP_005541351.1 COG4112 Predicted phosphoesterase (MutT family) YP_005541352.1 COG0208 Ribonucleotide reductase, beta subunit YP_005541353.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005541354.1 COG1780 Protein involved in ribonucleotide reduction YP_005541357.1 COG1923 Uncharacterized host factor I protein YP_005541358.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005541361.1 COG2076 Membrane transporters of cations and cationic drugs YP_005541362.1 COG2076 Membrane transporters of cations and cationic drugs YP_005541363.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005541364.1 COG4195 Phage-related replication protein YP_005541368.1 COG1404 Subtilisin-like serine proteases YP_005541370.1 COG3619 Predicted membrane protein YP_005541372.1 COG2124 Cytochrome P450 YP_005541373.1 COG3321 Polyketide synthase modules and related proteins YP_005541374.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005541375.1 COG3321 Polyketide synthase modules and related proteins YP_005541376.1 COG3321 Polyketide synthase modules and related proteins YP_005541377.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005541378.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005541379.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005541380.1 COG3425 3-hydroxy-3-methylglutaryl CoA synthase YP_005541381.1 COG0236 Acyl carrier protein YP_005541382.1 COG3321 Polyketide synthase modules and related proteins YP_005541383.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005541384.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005541385.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005541386.1 COG0249 Mismatch repair ATPase (MutS family) YP_005541388.1 COG4550 Predicted membrane protein YP_005541389.1 COG0621 2-methylthioadenine synthetase YP_005541390.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005541391.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005541392.1 COG2359 Uncharacterized protein conserved in bacteria YP_005541393.1 COG1692 Uncharacterized protein conserved in bacteria YP_005541394.1 COG1418 Predicted HD superfamily hydrolase YP_005541395.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005541396.1 COG0468 RecA/RadA recombinase YP_005541397.1 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA YP_005541398.1 COG0558 Phosphatidylglycerophosphate synthase YP_005541399.1 COG1426 Uncharacterized protein conserved in bacteria YP_005541400.1 similar to RBAM_16740 YP_005541402.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005541403.1 COG0612 Predicted Zn-dependent peptidases YP_005541404.1 COG0612 Predicted Zn-dependent peptidases; similar to RBAM_16700 YP_005541405.1 COG2409 Predicted drug exporters of the RND superfamily; similar to RBAM_16690 YP_005541406.1 COG1846 Transcriptional regulators; similar to RBAM_16680 YP_005541407.1 COG0477 Permeases of the major facilitator superfamily; similar to RBAM_16670 YP_005541408.1 COG2188 Transcriptional regulators YP_005541409.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005541410.1 similar to RBAM_16640 YP_005541411.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005541412.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005541413.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005541414.1 COG0527 Aspartokinases YP_005541415.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005541416.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005541417.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005541418.1 COG1873 Uncharacterized conserved protein YP_005541419.1 COG0612 Predicted Zn-dependent peptidases YP_005541420.1 COG0726 Predicted xylanase/chitin deacetylase YP_005541421.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005541422.1 COG0184 Ribosomal protein S15P/S13E YP_005541423.1 COG0196 FAD synthase YP_005541424.1 COG0130 Pseudouridine synthase YP_005541425.1 COG0858 Ribosome-binding factor A YP_005541426.1 COG1550 Uncharacterized protein conserved in bacteria YP_005541427.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005541428.1 COG1358 Ribosomal protein HS6-type (S12/L30/L7a) YP_005541429.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_005541430.1 COG0195 Transcription elongation factor YP_005541431.1 COG0779 Uncharacterized protein conserved in bacteria YP_005541432.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_005541433.1 COG0442 Prolyl-tRNA synthetase YP_005541434.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005541435.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005541436.1 COG0575 CDP-diglyceride synthetase YP_005541437.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005541438.1 COG0233 Ribosome recycling factor YP_005541439.1 COG0528 Uridylate kinase YP_005541440.1 COG0264 Translation elongation factor Ts YP_005541441.1 COG0052 Ribosomal protein S2 YP_005541443.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005541444.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_005541445.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005541446.1 COG0835 Chemotaxis signal transduction protein YP_005541447.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_005541448.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_005541449.1 COG0455 ATPases involved in chromosome partitioning YP_005541450.1 COG1419 Flagellar GTP-binding protein YP_005541451.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005541452.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005541453.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005541454.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005541455.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_005541457.1 COG0784 FOG: CheY-like receiver YP_005541458.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005541459.1 COG1868 Flagellar motor switch protein YP_005541460.1 COG1580 Flagellar basal body-associated protein YP_005541461.1 COG1582 Uncharacterized protein, possibly involved in motility YP_005541462.1 COG4786 Flagellar basal body rod protein YP_005541463.1 COG1843 Flagellar hook capping protein YP_005541464.1 COG3144 Flagellar hook-length control protein YP_005541467.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005541468.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005541469.1 COG1536 Flagellar motor switch protein YP_005541470.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_005541471.1 COG1677 Flagellar hook-basal body protein YP_005541472.1 COG1558 Flagellar basal body rod protein YP_005541473.1 COG4465 Pleiotropic transcriptional repressor YP_005541474.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005541475.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005541476.1 COG4974 Site-specific recombinase XerD YP_005541477.1 COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation YP_005541478.1 COG0550 Topoisomerase IA YP_005541479.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005541480.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005541481.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005541482.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_005541484.1 COG0164 Ribonuclease HII YP_005541485.1 COG1161 Predicted GTPases YP_005541486.1 COG0335 Ribosomal protein L19 YP_005541487.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005541488.1 COG0806 RimM protein, required for 16S rRNA processing YP_005541490.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_005541491.1 COG0228 Ribosomal protein S16 YP_005541492.1 COG0541 Signal recognition particle GTPase YP_005541493.1 COG2739 Uncharacterized protein conserved in bacteria YP_005541494.1 COG0552 Signal recognition particle GTPase YP_005541495.1 COG1196 Chromosome segregation ATPases YP_005541496.1 COG0571 dsRNA-specific ribonuclease YP_005541497.1 COG0236 Acyl carrier protein YP_005541498.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005541499.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005541500.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005541501.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005541502.1 COG1200 RecG-like helicase YP_005541503.1 COG1760 L-serine deaminase YP_005541504.1 COG1760 L-serine deaminase YP_005541505.1 COG1461 Predicted kinase related to dihydroxyacetone kinase YP_005541506.1 COG1302 Uncharacterized protein conserved in bacteria YP_005541507.1 COG0227 Ribosomal protein L28 YP_005541509.1 COG1564 Thiamine pyrophosphokinase YP_005541510.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005541511.1 COG1162 Predicted GTPases YP_005541512.1 COG0515 Serine/threonine protein kinase YP_005541513.1 COG0631 Serine/threonine protein phosphatase YP_005541514.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005541515.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_005541516.1 COG0223 Methionyl-tRNA formyltransferase YP_005541517.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005541518.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005541519.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005541520.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005541521.1 COG0194 Guanylate kinase YP_005541522.1 COG2052 Uncharacterized protein conserved in bacteria YP_005541523.1 COG1561 Uncharacterized stress-induced protein YP_005541524.1 COG0474 Cation transport ATPase YP_005541525.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_005541526.1 COG0366 Glycosidases YP_005541527.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_005541528.1 COG2138 Uncharacterized conserved protein YP_005541529.1 COG0007 Uroporphyrinogen-III methylase YP_005541530.1 COG0529 Adenylylsulfate kinase and related kinases YP_005541531.1 COG2046 ATP sulfurylase (sulfate adenylyltransferase) YP_005541532.1 COG0306 Phosphate/sulphate permeases YP_005541533.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_005541535.1 COG0461 Orotate phosphoribosyltransferase YP_005541536.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005541537.1 COG0167 Dihydroorotate dehydrogenase YP_005541538.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_005541539.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005541540.1 COG0505 Carbamoylphosphate synthase small subunit YP_005541541.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005541542.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005541543.1 COG2233 Xanthine/uracil permeases YP_005541544.1 COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase YP_005541545.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005541546.1 COG0597 Lipoprotein signal peptidase YP_005541547.1 COG1734 DnaK suppressor protein YP_005541548.1 COG0060 Isoleucyl-tRNA synthetase YP_005541550.1 COG3599 Cell division initiation protein YP_005541551.1 COG2302 Uncharacterized conserved protein, contains S4-like domain YP_005541552.1 COG0762 Predicted integral membrane protein YP_005541553.1 COG1799 Uncharacterized protein conserved in bacteria YP_005541554.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005541555.1 COG1496 Uncharacterized conserved protein YP_005541556.1 COG1873 Uncharacterized conserved protein YP_005541557.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005541558.1 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA YP_005541560.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005541561.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005541563.1 COG1404 Subtilisin-like serine proteases YP_005541564.1 COG0206 Cell division GTPase YP_005541565.1 COG0849 Actin-like ATPase involved in cell division YP_005541566.1 COG1589 Cell division septal protein YP_005541567.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005541568.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005541569.1 COG0772 Bacterial cell division membrane protein YP_005541570.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005541571.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005541572.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005541573.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005541574.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005541575.1 COG4839 Protein required for the initiation of cell division YP_005541576.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005541577.1 COG2001 Uncharacterized protein conserved in bacteria YP_005541578.1 COG4365 Uncharacterized protein conserved in bacteria YP_005541579.1 COG1893 Ketopantoate reductase YP_005541580.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005541582.1 COG0333 Ribosomal protein L32 YP_005541583.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_005541584.1 COG1323 Predicted nucleotidyltransferase YP_005541585.1 COG3480 Predicted secreted protein containing a PDZ domain YP_005541586.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005541587.1 COG3314 Uncharacterized protein conserved in bacteria YP_005541588.1 COG0669 Phosphopantetheine adenylyltransferase YP_005541589.1 COG0742 N6-adenine-specific methylase YP_005541591.1 COG4471 Uncharacterized protein conserved in bacteria YP_005541592.1 COG3679 Uncharacterized conserved protein YP_005541595.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_005541596.1 COG0517 FOG: CBS domain YP_005541598.1 COG3336 Predicted membrane protein YP_005541599.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_005541600.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005541601.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005541602.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005541603.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005541604.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_005541605.1 COG1038 Pyruvate carboxylase YP_005541606.1 COG0772 Bacterial cell division membrane protein YP_005541607.1 COG4838 Uncharacterized protein conserved in bacteria YP_005541608.1 COG2066 Glutaminase YP_005541610.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_005541612.1 COG4896 Uncharacterized protein conserved in bacteria YP_005541614.1 COG1217 Predicted membrane GTPase involved in stress response YP_005541619.1 COG3227 Zinc metalloprotease (elastase) YP_005541620.1 COG0456 Acetyltransferases YP_005541621.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005541623.1 COG4493 Uncharacterized protein conserved in bacteria YP_005541624.1 COG4476 Uncharacterized protein conserved in bacteria YP_005541625.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_005541626.1 COG0726 Predicted xylanase/chitin deacetylase; similar to RBAM_14470 YP_005541628.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005541629.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005541630.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005541631.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005541634.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005541635.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005541636.1 COG5503 Uncharacterized conserved small protein YP_005541637.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005541638.1 COG1001 Adenine deaminase YP_005541639.1 COG0569 K+ transport systems, NAD-binding component YP_005541640.1 COG2105 Uncharacterized conserved protein YP_005541641.1 COG0642 Signal transduction histidine kinase YP_005541642.1 COG2002 Regulators of stationary/sporulation gene expression YP_005541643.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005541645.1 COG2309 Leucyl aminopeptidase (aminopeptidase T) YP_005541646.1 COG1893 Ketopantoate reductase YP_005541647.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005541649.1 COG0681 Signal peptidase I YP_005541650.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005541651.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) YP_005541652.1 COG1349 Transcriptional regulators of sugar metabolism YP_005541653.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005541654.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005541655.1 COG0845 Membrane-fusion protein YP_005541658.1 COG1977 Molybdopterin converting factor, small subunit YP_005541659.1 COG0314 Molybdopterin converting factor, large subunit YP_005541660.1 COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein YP_005541661.1 COG0303 Molybdopterin biosynthesis enzyme YP_005541662.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005541663.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_005541666.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005541667.1 COG0450 Peroxiredoxin YP_005541668.1 COG0668 Small-conductance mechanosensitive channel YP_005541669.1 COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis YP_005541670.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005541671.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005541672.1 COG0716 Flavodoxins YP_005541674.1 COG0716 Flavodoxins YP_005541675.1 COG0583 Transcriptional regulator YP_005541676.1 COG0517 FOG: CBS domain YP_005541678.1 COG1978 Uncharacterized protein conserved in bacteria YP_005541679.1 COG4703 Uncharacterized protein conserved in bacteria YP_005541680.1 COG2200 FOG: EAL domain YP_005541682.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005541683.1 COG1408 Predicted phosphohydrolases YP_005541684.1 COG1376 Uncharacterized protein conserved in bacteria YP_005541685.1 COG0477 Permeases of the major facilitator superfamily YP_005541687.1 COG0835 Chemotaxis signal transduction protein YP_005541688.1 similar to RBAM_013790 YP_005541689.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005541690.1 COG2202 FOG: PAS/PAC domain YP_005541691.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005541692.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_005541694.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005541695.1 COG0840 Methyl-accepting chemotaxis protein YP_005541696.1 COG1533 DNA repair photolyase YP_005541698.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_005541699.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005541700.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005541701.1 COG3711 Transcriptional antiterminator YP_005541702.1 COG1609 Transcriptional regulators YP_005541704.1 COG0006 Xaa-Pro aminopeptidase YP_005541705.1 COG2217 Cation transport ATPase YP_005541706.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005541707.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005541708.1 COG3773 Cell wall hydrolyses involved in spore germination YP_005541709.1 similar to RBAM_13580 YP_005541710.1 COG4873 Uncharacterized protein conserved in bacteria YP_005541712.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_005541713.1 COG0602 Organic radical activating enzymes YP_005541714.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005541715.1 COG0603 Predicted PP-loop superfamily ATPase YP_005541716.1 similar to RBAM_13480 YP_005541718.1 COG3949 Uncharacterized membrane protein YP_005541719.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005541720.1 COG1291 Flagellar motor component YP_005541721.1 COG1360 Flagellar motor protein YP_005541722.1 COG1846 Transcriptional regulators YP_005541723.1 COG0642 Signal transduction histidine kinase YP_005541725.1 COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005541726.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005541727.1 COG4359 Uncharacterized conserved protein, possibly involved in methylthioadenosine recycling YP_005541728.1 COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit YP_005541729.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005541730.1 COG0388 Predicted amidohydrolase YP_005541731.1 COG4857 Predicted kinase YP_005541732.1 COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family YP_005541734.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005541735.1 COG2202 FOG: PAS/PAC domain YP_005541736.1 COG3594 Fucose 4-O-acetylase and related acetyltransferases YP_005541738.1 COG2323 Predicted membrane protein YP_005541739.1 COG0168 Trk-type K+ transport systems, membrane components YP_005541740.1 COG0501 Zn-dependent protease with chaperone function YP_005541744.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005541745.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005541746.1 COG0586 Uncharacterized membrane-associated protein YP_005541747.1 COG3300 MHYT domain (predicted integral membrane sensor domain) YP_005541748.1 COG1273 Uncharacterized conserved protein YP_005541749.1 COG1793 ATP-dependent DNA ligase YP_005541750.1 COG0688 Phosphatidylserine decarboxylase YP_005541751.1 COG1846 Transcriptional regulators YP_005541754.1 COG0789 Predicted transcriptional regulators YP_005541755.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005541758.1 COG3858 Predicted glycosyl hydrolase YP_005541760.1 COG4721 Predicted membrane protein YP_005541761.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005541762.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters YP_005541763.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005541764.1 COG1404 Subtilisin-like serine proteases YP_005541765.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005541766.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_005541767.1 COG0477 Permeases of the major facilitator superfamily; similar to RBAM_13020 YP_005541770.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; similar to RBAM_13010 YP_005541771.1 similar to RBAM_12990 YP_005541772.1 similar to RBAM_12980 YP_005541773.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005541774.1 COG1846 Transcriptional regulators YP_005541775.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005541776.1 COG0014 Gamma-glutamyl phosphate reductase YP_005541777.1 COG0263 Glutamate 5-kinase YP_005541778.1 COG0788 Formyltetrahydrofolate hydrolase YP_005541779.1 COG2076 Membrane transporters of cations and cationic drugs YP_005541780.1 COG2076 Membrane transporters of cations and cationic drugs YP_005541781.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005541782.1 COG1607 Acyl-CoA hydrolase YP_005541783.1 COG1834 N-Dimethylarginine dimethylaminohydrolase YP_005541784.1 COG2706 3-carboxymuconate cyclase YP_005541785.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005541786.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005541787.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005541788.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005541789.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005541790.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005541791.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005541792.1 COG2362 D-aminopeptidase YP_005541793.1 COG0477 Permeases of the major facilitator superfamily YP_005541794.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005541796.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005541797.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_005541798.1 COG0346 Lactoylglutathione lyase and related lyases YP_005541799.1 COG0531 Amino acid transporters YP_005541800.1 COG1392 Phosphate transport regulator (distant homolog of PhoU) YP_005541801.1 COG0306 Phosphate/sulphate permeases YP_005541804.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005541813.1 COG3299 Uncharacterized homolog of phage Mu protein gp47 YP_005541817.1 COG1652 Uncharacterized protein containing LysM domain YP_005541818.1 COG3953 SLT domain proteins YP_005541830.1 COG5518 Bacteriophage capsid portal protein YP_005541831.1 COG1783 Phage terminase large subunit YP_005541832.1 COG3728 Phage terminase, small subunit YP_005541833.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005541838.1 COG1484 DNA replication protein YP_005541840.1 similar to RBAM_012520 YP_005541841.1 COG1396 Predicted transcriptional regulators YP_005541842.1 COG2856 Predicted Zn peptidase YP_005541843.1 COG4195 Phage-related replication protein YP_005541845.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005541847.1 COG0457 FOG: TPR repeat YP_005541848.1 COG2318 Uncharacterized protein conserved in bacteria YP_005541849.1 COG0730 Predicted permeases YP_005541851.1 COG0642 Signal transduction histidine kinase YP_005541852.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005541853.1 COG2721 Altronate dehydratase YP_005541855.1 COG1609 Transcriptional regulators YP_005541856.1 COG1904 Glucuronate isomerase YP_005541857.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_005541858.1 COG2427 Uncharacterized conserved protein YP_005541859.1 COG4297 Uncharacterized protein containing double-stranded beta helix domain YP_005541861.1 COG1117 ABC-type phosphate transport system, ATPase component YP_005541862.1 COG0390 ABC-type uncharacterized transport system, permease component YP_005541863.1 COG1587 Uroporphyrinogen-III synthase YP_005541865.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_005541866.1 COG2124 Cytochrome P450 YP_005541867.1 COG2427 Uncharacterized conserved protein YP_005541868.1 COG3383 Uncharacterized anaerobic dehydrogenase YP_005541872.1 COG1285 Uncharacterized membrane protein; similar to RBAM_012230 YP_005541873.1 COG1846 Transcriptional regulators YP_005541875.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005541876.1 COG1349 Transcriptional regulators of sugar metabolism YP_005541877.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005541878.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_005541879.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005541880.1 COG4468 Galactose-1-phosphate uridyltransferase YP_005541881.1 COG3867 Arabinogalactan endo-1,4-beta-galactosidase YP_005541882.1 COG1846 Transcriptional regulators; similar to RBAM_012110; similar to RBAM_012110 YP_005541883.1 COG0477 Permeases of the major facilitator superfamily YP_005541884.1 COG1359 Uncharacterized conserved protein YP_005541885.1 COG2367 Beta-lactamase class A YP_005541886.1 similar to RBAM_012070v2 YP_005541887.1 similar to RBAM_011960 YP_005541888.1 COG3055 Uncharacterized protein conserved in bacteria YP_005541894.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005541898.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005541900.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005541902.1 COG1893 Ketopantoate reductase YP_005541907.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005541912.1 COG0513 Superfamily II DNA and RNA helicases YP_005541916.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005541923.1 COG3299 Uncharacterized homolog of phage Mu protein gp47 YP_005541925.1 COG0326 Molecular chaperone, HSP90 family YP_005541926.1 COG0840 Methyl-accepting chemotaxis protein YP_005541928.1 COG1388 FOG: LysM repeat YP_005541929.1 COG5412 Phage-related protein YP_005541931.1 COG2884 Predicted ATPase involved in cell division YP_005541936.1 COG0714 MoxR-like ATPases YP_005541937.1 COG2369 Uncharacterized protein, homolog of phage Mu protein gp30 YP_005541944.1 COG5484 Uncharacterized conserved protein YP_005541947.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005541952.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_005541955.1 COG5492 Bacterial surface proteins containing Ig-like domains YP_005541957.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_005541964.1 COG4570 Holliday junction resolvase YP_005541967.1 COG1484 DNA replication protein YP_005541968.1 COG3935 Putative primosome component and related proteins YP_005541977.1 COG1396 Predicted transcriptional regulators YP_005541978.1 COG1396 Predicted transcriptional regulators YP_005541979.1 COG1525 Micrococcal nuclease (thermonuclease) homologs YP_005541982.1 COG0582 Integrase YP_005541983.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005541984.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005541986.1 COG2382 Enterochelin esterase and related enzymes YP_005541987.1 COG1514 2'-5' RNA ligase YP_005541988.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005541989.1 COG2002 Regulators of stationary/sporulation gene expression; similar to RBAM_011890; similar to RBAM_011890 YP_005541990.1 COG1131 ABC-type multidrug transport system, ATPase component; similar to RBAM_011880 YP_005541991.1 COG0842 ABC-type multidrug transport system, permease component; similar to RBAM_011870 YP_005541992.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005541993.1 similar to RBAM_011850 YP_005541994.1 COG0210 Superfamily I DNA and RNA helicases YP_005541997.1 similar to RBAM_011810 YP_005542006.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005542007.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005542008.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005542009.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_005542010.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_005542011.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005542012.1 COG0352 Thiamine monophosphate synthase YP_005542013.1 COG0819 Putative transcription activator YP_005542014.1 COG0475 Kef-type K+ transport systems, membrane components YP_005542015.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_005542016.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005542017.1 COG0061 Predicted sugar kinase YP_005542018.1 COG2357 Uncharacterized protein conserved in bacteria YP_005542020.1 COG4116 Uncharacterized protein conserved in bacteria YP_005542021.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005542022.1 COG2346 Truncated hemoglobins YP_005542023.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_005542024.1 similar to RBAM_011550 YP_005542025.1 COG1164 Oligoendopeptidase F YP_005542026.1 COG4469 Competence protein YP_005542027.1 COG4862 Negative regulator of genetic competence, sporulation and motility YP_005542028.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005542029.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005542030.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005542031.1 COG1306 Uncharacterized conserved protein; similar to RBAM_011480 YP_005542032.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005542033.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005542034.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005542035.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005542036.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005542037.1 COG0180 Tryptophanyl-tRNA synthetase YP_005542039.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005542040.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005542041.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005542042.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005542043.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005542044.1 COG5504 Predicted Zn-dependent protease YP_005542045.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005542046.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005542049.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein YP_005542050.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005542054.1 COG0078 Ornithine carbamoyltransferase YP_005542055.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005542056.1 COG0505 Carbamoylphosphate synthase small subunit YP_005542057.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005542058.1 COG0548 Acetylglutamate kinase YP_005542059.1 COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) YP_005542060.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_005542061.1 COG0477 Permeases of the major facilitator superfamily YP_005542062.1 COG0277 FAD/FMN-containing dehydrogenases YP_005542063.1 COG1015 Phosphopentomutase YP_005542064.1 COG4974 Site-specific recombinase XerD YP_005542066.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005542067.1 COG1300 Uncharacterized membrane protein YP_005542069.1 similar to RBAM_021670 YP_005542070.1 COG0281 Malic enzyme YP_005542071.1 COG1757 Na+/H+ antiporter YP_005542072.1 COG1027 Aspartate ammonia-lyase YP_005542073.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_005542074.1 COG1396 Predicted transcriptional regulators YP_005542075.1 COG1379 Uncharacterized conserved protein YP_005542076.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005542078.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005542080.1 COG1073 Hydrolases of the alpha/beta superfamily YP_005542082.1 COG4918 Uncharacterized protein conserved in bacteria YP_005542083.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005542086.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005542087.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005542090.1 COG0628 Predicted permease; similar to RBAM_021860 YP_005542091.1 similar to RBAM_021870 YP_005542092.1 COG1072 Panthothenate kinase YP_005542093.1 COG3048 D-serine dehydratase YP_005542094.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_005542095.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005542096.1 COG0345 Pyrroline-5-carboxylate reductase YP_005542098.1 COG0583 Transcriptional regulator; similar to RBAM_022100 YP_005542099.1 COG3136 Uncharacterized membrane protein required for alginate biosynthesis; similar to RBAM_022110 YP_005542100.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005542101.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005542102.1 COG0267 Ribosomal protein L33 YP_005542103.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_005542105.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005542106.1 COG0362 6-phosphogluconate dehydrogenase YP_005542107.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005542109.1 COG0706 Preprotein translocase subunit YidC YP_005542110.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005542111.1 COG0346 Lactoylglutathione lyase and related lyases YP_005542113.1 COG1376 Uncharacterized protein conserved in bacteria YP_005542114.1 COG4129 Predicted membrane protein YP_005542115.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005542116.1 COG0765 ABC-type amino acid transport system, permease component YP_005542117.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005542119.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_005542120.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005542121.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005542122.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005542123.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005542124.1 COG3426 Butyrate kinase YP_005542125.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005542126.1 COG0280 Phosphotransacetylase YP_005542127.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_005542129.1 COG2513 PEP phosphonomutase and related enzymes YP_005542130.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_005542131.1 COG0372 Citrate synthase YP_005542132.1 COG1960 Acyl-CoA dehydrogenases YP_005542133.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005542134.1 COG0183 Acetyl-CoA acetyltransferase YP_005542135.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005542136.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005542138.1 COG1971 Predicted membrane protein; similar to RBAM_022490 YP_005542139.1 COG3339 Uncharacterized conserved protein; similar to RBAM_022500 YP_005542141.1 similar to RBAM_022510 YP_005542142.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005542144.1 similar to RBAM_022530 YP_005542145.1 COG0787 Alanine racemase YP_005542147.1 COG0784 FOG: CheY-like receiver YP_005542148.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005542149.1 COG0497 ATPase involved in DNA repair YP_005542150.1 COG1438 Arginine repressor YP_005542151.1 COG1189 Predicted rRNA methylase YP_005542152.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005542153.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005542154.1 COG1722 Exonuclease VII small subunit YP_005542155.1 COG1570 Exonuclease VII, large subunit YP_005542156.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005542157.1 COG0781 Transcription termination factor YP_005542159.1 COG1302 Uncharacterized protein conserved in bacteria YP_005542160.1 COG0439 Biotin carboxylase YP_005542161.1 COG0511 Biotin carboxyl carrier protein YP_005542169.1 COG3854 Uncharacterized protein conserved in bacteria YP_005542171.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005542172.1 COG0006 Xaa-Pro aminopeptidase YP_005542174.1 COG3872 Predicted metal-dependent enzyme YP_005542176.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005542177.1 COG1321 Mn-dependent transcriptional regulator YP_005542178.1 COG0095 Lipoate-protein ligase A YP_005542179.1 COG0607 Rhodanese-related sulfurtransferase YP_005542180.1 COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain YP_005542181.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_005542182.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_005542183.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005542186.1 COG1396 Predicted transcriptional regulators YP_005542188.1 COG0681 Signal peptidase I YP_005542193.1 COG4940 Competence protein ComGF YP_005542195.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_005542196.1 COG4537 Competence protein ComGC YP_005542197.1 COG1459 Type II secretory pathway, component PulF YP_005542198.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_005542199.1 COG0598 Mg2+ and Co2+ transporters YP_005542200.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005542201.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005542202.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005542204.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005542206.1 COG0011 Uncharacterized conserved protein YP_005542207.1 COG2866 Predicted carboxypeptidase YP_005542208.1 COG1940 Transcriptional regulator/sugar kinase YP_005542209.1 COG4483 Uncharacterized protein conserved in bacteria YP_005542210.1 COG1757 Na+/H+ antiporter YP_005542212.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005542213.1 COG0267 Ribosomal protein L33 YP_005542216.1 COG1117 ABC-type phosphate transport system, ATPase component YP_005542217.1 COG1117 ABC-type phosphate transport system, ATPase component YP_005542218.1 COG0581 ABC-type phosphate transport system, permease component YP_005542219.1 COG0573 ABC-type phosphate transport system, permease component YP_005542220.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_005542221.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005542222.1 COG0477 Permeases of the major facilitator superfamily YP_005542223.1 COG0605 Superoxide dismutase YP_005542224.1 COG2839 Uncharacterized protein conserved in bacteria YP_005542227.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005542229.1 COG5663 Uncharacterized conserved protein YP_005542230.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005542231.1 COG1284 Uncharacterized conserved protein YP_005542233.1 COG0648 Endonuclease IV YP_005542234.1 COG0513 Superfamily II DNA and RNA helicases YP_005542236.1 COG0761 Penicillin tolerance protein YP_005542237.1 COG0327 Uncharacterized conserved protein YP_005542238.1 COG2384 Predicted SAM-dependent methyltransferase YP_005542239.1 COG2010 Cytochrome c, mono- and diheme variants YP_005542240.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005542241.1 COG0358 DNA primase (bacterial type) YP_005542242.1 COG1671 Uncharacterized protein conserved in bacteria YP_005542243.1 COG1806 Uncharacterized protein conserved in bacteria YP_005542244.1 COG0517 FOG: CBS domain YP_005542245.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005542246.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005542247.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_005542249.1 COG1159 GTPase YP_005542250.1 COG0295 Cytidine deaminase YP_005542251.1 COG0818 Diacylglycerol kinase YP_005542252.1 COG0319 Predicted metal-dependent hydrolase YP_005542253.1 COG1480 Predicted membrane-associated HD superfamily hydrolase YP_005542254.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_005542258.1 COG4864 Uncharacterized protein conserved in bacteria YP_005542259.1 COG1030 Membrane-bound serine protease (ClpP class) YP_005542260.1 COG1610 Uncharacterized conserved protein YP_005542261.1 COG0828 Ribosomal protein S21 YP_005542262.1 COG1283 Na+/phosphate symporter YP_005542263.1 COG0621 2-methylthioadenine synthetase YP_005542264.1 COG1385 Uncharacterized protein conserved in bacteria YP_005542265.1 COG2264 Ribosomal protein L11 methylase YP_005542266.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005542267.1 COG0443 Molecular chaperone YP_005542268.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005542269.1 COG1420 Transcriptional regulator of heat shock gene YP_005542270.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005542271.1 COG0481 Membrane GTPase LepA YP_005542275.1 COG0268 Ribosomal protein S20 YP_005542276.1 COG1466 DNA polymerase III, delta subunit YP_005542278.1 COG0658 Predicted membrane metal-binding protein YP_005542279.1 COG2131 Deoxycytidylate deaminase YP_005542280.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_005542281.1 COG0345 Pyrroline-5-carboxylate reductase YP_005542282.1 COG0500 SAM-dependent methyltransferases YP_005542283.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005542284.1 COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism YP_005542285.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005542286.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_005542287.1 COG0169 Shikimate 5-dehydrogenase YP_005542288.1 COG1161 Predicted GTPases YP_005542289.1 COG2179 Predicted hydrolase of the HAD superfamily YP_005542292.1 COG2755 Lysophospholipase L1 and related esterases YP_005542293.1 COG0726 Predicted xylanase/chitin deacetylase; similar to RBAM_024010 YP_005542294.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005542295.1 COG0398 Uncharacterized conserved protein YP_005542296.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005542297.1 COG0477 Permeases of the major facilitator superfamily; similar to RBAM_024030 YP_005542299.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005542301.1 similar to RBAM_024050 YP_005542302.1 similar to RBAM_024060 YP_005542303.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005542304.1 COG0563 Adenylate kinase and related kinases YP_005542306.1 COG0477 Permeases of the major facilitator superfamily YP_005542308.1 COG2318 Uncharacterized protein conserved in bacteria YP_005542309.1 COG0561 Predicted hydrolases of the HAD superfamily; similar to RBAM_024160 YP_005542310.1 COG0561 Predicted hydrolases of the HAD superfamily; similar to RBAM_024170 YP_005542311.1 COG1737 Transcriptional regulators; similar to RBAM_024180 YP_005542312.1 COG1482 Phosphomannose isomerase YP_005542313.1 COG1445 Phosphotransferase system fructose-specific component IIB YP_005542314.1 COG3711 Transcriptional antiterminator YP_005542315.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; similar to RBAM_024220 YP_005542316.1 COG2606 Uncharacterized conserved protein YP_005542317.1 COG0583 Transcriptional regulator; similar to RBAM_024240 YP_005542318.1 COG0477 Permeases of the major facilitator superfamily YP_005542319.1 COG2124 Cytochrome P450 YP_005542320.1 COG1309 Transcriptional regulator YP_005542321.1 COG0500 SAM-dependent methyltransferases YP_005542323.1 COG2116 Formate/nitrite family of transporters YP_005542324.1 COG5609 Uncharacterized conserved protein YP_005542325.1 COG3383 Uncharacterized anaerobic dehydrogenase YP_005542326.1 COG2427 Uncharacterized conserved protein YP_005542328.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005542329.1 COG0031 Cysteine synthase YP_005542330.1 COG0775 Nucleoside phosphorylase YP_005542331.1 COG0500 SAM-dependent methyltransferases YP_005542334.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005542335.1 COG0782 Transcription elongation factor YP_005542336.1 COG0572 Uridine kinase YP_005542337.1 COG0826 Collagenase and related proteases YP_005542338.1 COG0826 Collagenase and related proteases YP_005542339.1 COG4122 Predicted O-methyltransferase YP_005542340.1 COG1559 Predicted periplasmic solute-binding protein YP_005542341.1 COG3906 Uncharacterized protein conserved in bacteria YP_005542342.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005542343.1 COG4472 Uncharacterized protein conserved in bacteria YP_005542344.1 COG0013 Alanyl-tRNA synthetase YP_005542345.1 COG0628 Predicted permease YP_005542346.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005542347.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005542348.1 COG0765 ABC-type amino acid transport system, permease component YP_005542349.1 COG0765 ABC-type amino acid transport system, permease component YP_005542352.1 COG3881 Uncharacterized protein conserved in bacteria YP_005542353.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005542354.1 COG0457 FOG: TPR repeat YP_005542355.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005542356.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005542357.1 COG1959 Predicted transcriptional regulator YP_005542358.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_005542359.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_005542360.1 COG0173 Aspartyl-tRNA synthetase YP_005542361.1 COG0124 Histidyl-tRNA synthetase YP_005542364.1 COG3103 SH3 domain protein YP_005542365.1 COG1490 D-Tyr-tRNAtyr deacylase YP_005542366.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005542367.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005542368.1 COG0608 Single-stranded DNA-specific exonuclease YP_005542369.1 COG5416 Uncharacterized integral membrane protein YP_005542370.1 COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels YP_005542371.1 COG0342 Preprotein translocase subunit SecD YP_005542373.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005542374.1 COG2323 Predicted membrane protein YP_005542376.1 COG1862 Preprotein translocase subunit YajC YP_005542377.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005542378.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005542380.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005542381.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005542383.1 similar to RBAM_024870 YP_005542385.1 COG1388 FOG: LysM repeat YP_005542386.1 COG0379 Quinolinate synthase YP_005542387.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_005542388.1 COG0029 Aspartate oxidase YP_005542389.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005542390.1 COG1827 Predicted small molecule binding protein (contains 3H domain) YP_005542391.1 COG0077 Prephenate dehydratase YP_005542392.1 COG4492 ACT domain-containing protein YP_005542393.1 COG0536 Predicted GTPase YP_005542394.1 COG0642 Signal transduction histidine kinase YP_005542395.1 COG0211 Ribosomal protein L27 YP_005542396.1 COG2868 Predicted ribosomal protein YP_005542397.1 COG0261 Ribosomal protein L21 YP_005542398.1 COG1994 Zn-dependent proteases YP_005542399.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005542400.1 COG2894 Septum formation inhibitor-activating ATPase YP_005542401.1 COG0850 Septum formation inhibitor YP_005542402.1 COG2891 Cell shape-determining protein YP_005542403.1 COG1792 Cell shape-determining protein YP_005542404.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005542405.1 COG2003 DNA repair proteins YP_005542406.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005542407.1 COG0797 Lipoproteins YP_005542408.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_005542409.1 COG0285 Folylpolyglutamate synthase YP_005542410.1 COG0525 Valyl-tRNA synthetase YP_005542411.1 similar to RBAM_025150 YP_005542413.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005542414.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005542415.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005542416.1 COG1587 Uroporphyrinogen-III synthase YP_005542417.1 COG0181 Porphobilinogen deaminase YP_005542418.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005542419.1 COG0373 Glutamyl-tRNA reductase YP_005542421.1 COG0218 Predicted GTPase YP_005542422.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005542423.1 COG1067 Predicted ATP-dependent protease YP_005542424.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005542425.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005542426.1 COG0457 FOG: TPR repeat YP_005542428.1 COG0066 3-isopropylmalate dehydratase small subunit YP_005542429.1 COG0065 3-isopropylmalate dehydratase large subunit YP_005542430.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005542431.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_005542432.1 COG0059 Ketol-acid reductoisomerase YP_005542433.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_005542434.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_005542438.1 similar to RBAM_025930 YP_005542439.1 COG0622 Predicted phosphoesterase YP_005542440.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_005542441.1 COG0689 RNase PH YP_005542442.1 COG5401 Spore germination protein YP_005542443.1 COG0796 Glutamate racemase YP_005542444.1 COG1846 Transcriptional regulators YP_005542445.1 COG2771 DNA-binding HTH domain-containing proteins YP_005542446.1 COG0824 Predicted thioesterase YP_005542447.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005542448.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005542449.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005542450.1 COG0515 Serine/threonine protein kinase YP_005542451.1 COG0527 Aspartokinases YP_005542452.1 COG0322 Nuclease subunit of the excinuclease complex YP_005542453.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005542454.1 COG3534 Alpha-L-arabinofuranosidase YP_005542455.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_005542456.1 COG2086 Electron transfer flavoprotein, beta subunit YP_005542457.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005542458.1 COG1309 Transcriptional regulator YP_005542459.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005542462.1 COG3766 Predicted membrane protein YP_005542463.1 COG1193 Mismatch repair ATPase (MutS family) YP_005542464.1 COG1796 DNA polymerase IV (family X) YP_005542465.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005542466.1 COG3027 Uncharacterized protein conserved in bacteria YP_005542467.1 COG1039 Ribonuclease HIII YP_005542468.1 COG0073 EMAP domain YP_005542469.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005542470.1 COG0566 rRNA methylases YP_005542472.1 COG3835 Sugar diacid utilization regulator YP_005542473.1 COG0277 FAD/FMN-containing dehydrogenases YP_005542474.1 COG0247 Fe-S oxidoreductase YP_005542475.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005542476.1 COG3534 Alpha-L-arabinofuranosidase YP_005542477.1 COG0395 ABC-type sugar transport system, permease component YP_005542478.1 COG1175 ABC-type sugar transport systems, permease components YP_005542479.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005542480.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005542481.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005542482.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005542483.1 COG1069 Ribulose kinase YP_005542484.1 COG2160 L-arabinose isomerase YP_005542485.1 COG3507 Beta-xylosidase YP_005542486.1 COG1363 Cellulase M and related proteins YP_005542488.1 COG3326 Predicted membrane protein YP_005542489.1 COG0292 Ribosomal protein L20 YP_005542490.1 COG0291 Ribosomal protein L35 YP_005542491.1 COG0290 Translation initiation factor 3 (IF-3) YP_005542492.1 COG1346 Putative effector of murein hydrolase YP_005542493.1 COG1380 Putative effector of murein hydrolase LrgA YP_005542494.1 COG3279 Response regulator of the LytR/AlgR family YP_005542495.1 COG3275 Putative regulator of cell autolysis YP_005542496.1 COG1011 Predicted hydrolase (HAD superfamily) YP_005542497.1 COG0441 Threonyl-tRNA synthetase YP_005542499.1 COG0398 Uncharacterized conserved protein YP_005542500.1 COG1484 DNA replication protein YP_005542501.1 COG3611 Replication initiation/membrane attachment protein YP_005542502.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_005542503.1 COG1586 S-adenosylmethionine decarboxylase YP_005542504.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005542505.1 COG1733 Predicted transcriptional regulators YP_005542506.1 COG2814 Arabinose efflux permease YP_005542507.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005542508.1 COG0237 Dephospho-CoA kinase YP_005542509.1 COG1971 Predicted membrane protein YP_005542510.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005542511.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005542512.1 COG0642 Signal transduction histidine kinase YP_005542513.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005542515.1 COG0039 Malate/lactate dehydrogenases YP_005542516.1 COG0538 Isocitrate dehydrogenases YP_005542517.1 COG0372 Citrate synthase YP_005542519.1 COG2707 Predicted membrane protein YP_005542520.1 COG0628 Predicted permease YP_005542521.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_005542522.1 COG0469 Pyruvate kinase YP_005542523.1 COG0205 6-phosphofructokinase YP_005542524.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_005542525.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005542527.1 COG0281 Malic enzyme YP_005542528.1 COG0587 DNA polymerase III, alpha subunit YP_005542532.1 COG0618 Exopolyphosphatase-related proteins YP_005542534.1 COG4109 Predicted transcriptional regulator containing CBS domains YP_005542535.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005542536.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005542538.1 COG0165 Argininosuccinate lyase YP_005542539.1 COG0137 Argininosuccinate synthase YP_005542540.1 COG0521 Molybdopterin biosynthesis enzymes YP_005542541.1 COG0282 Acetate kinase YP_005542542.1 COG0827 Adenine-specific DNA methylase YP_005542543.1 COG2077 Peroxiredoxin YP_005542544.1 COG3874 Uncharacterized conserved protein YP_005542546.1 COG1714 Predicted membrane protein/domain YP_005542547.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005542548.1 COG0061 Predicted sugar kinase YP_005542549.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_005542550.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005542552.1 COG0301 Thiamine biosynthesis ATP pyrophosphatase YP_005542553.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005542554.1 COG1114 Branched-chain amino acid permeases YP_005542555.1 COG4477 Negative regulator of septation ring formation YP_005542556.1 COG1387 Histidinol phosphatase and related hydrolases of the PHP family YP_005542557.1 COG1309 Transcriptional regulator YP_005542558.1 COG1956 GAF domain-containing protein YP_005542559.1 COG2199 FOG: GGDEF domain YP_005542561.1 COG0522 Ribosomal protein S4 and related proteins YP_005542562.1 COG1017 Hemoglobin-like flavoprotein YP_005542564.1 COG0693 Putative intracellular protease/amidase YP_005542566.1 COG2755 Lysophospholipase L1 and related esterases; similar to RBAM_026730 YP_005542567.1 similar to RBAM_026740 YP_005542568.1 COG0053 Predicted Co/Zn/Cd cation transporters; similar to RBAM_026750 YP_005542569.1 COG1378 Predicted transcriptional regulators; similar to RBAM_026760 YP_005542570.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); similar to RBAM_026770 YP_005542571.1 COG4392 Predicted membrane protein; similar to RBAM_026780 YP_005542573.1 COG0162 Tyrosyl-tRNA synthetase YP_005542574.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005542575.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005542576.1 COG0517 FOG: CBS domain YP_005542577.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_005542578.1 COG1360 Flagellar motor protein YP_005542579.1 COG1291 Flagellar motor component YP_005542580.1 COG1609 Transcriptional regulators YP_005542581.1 COG1605 Chorismate mutase YP_005542583.1 COG4980 Gas vesicle protein YP_005542584.1 COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain YP_005542585.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005542586.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005542587.1 COG0073 EMAP domain YP_005542588.1 COG4848 Uncharacterized protein conserved in bacteria YP_005542589.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005542590.1 COG3613 Nucleoside 2-deoxyribosyltransferase YP_005542591.1 COG1363 Cellulase M and related proteins YP_005542592.1 COG5584 Predicted small secreted protein YP_005542593.1 COG0281 Malic enzyme YP_005542594.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005542595.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005542597.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_005542598.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_005542600.1 COG1514 2'-5' RNA ligase YP_005542601.1 COG0031 Cysteine synthase YP_005542602.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005542603.1 COG2252 Permeases YP_005542604.1 COG4473 Predicted ABC-type exoprotein transport system, permease component YP_005542605.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005542606.1 COG1349 Transcriptional regulators of sugar metabolism YP_005542607.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005542608.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005542609.1 COG2081 Predicted flavoproteins YP_005542610.1 COG1292 Choline-glycine betaine transporter YP_005542612.1 COG1609 Transcriptional regulators YP_005542613.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005542614.1 COG1175 ABC-type sugar transport systems, permease components YP_005542615.1 COG0395 ABC-type sugar transport system, permease component YP_005542616.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_005542617.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; similar to RBAM_027230 YP_005542618.1 COG0607 Rhodanese-related sulfurtransferase YP_005542619.1 COG0495 Leucyl-tRNA synthetase YP_005542621.1 COG2202 FOG: PAS/PAC domain YP_005542622.1 COG0477 Permeases of the major facilitator superfamily YP_005542623.1 COG5522 Predicted integral membrane protein YP_005542624.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005542625.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005542626.1 COG0642 Signal transduction histidine kinase YP_005542627.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005542628.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005542629.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005542631.1 COG0842 ABC-type multidrug transport system, permease component YP_005542632.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_005542633.1 COG1725 Predicted transcriptional regulators YP_005542637.1 COG1242 Predicted Fe-S oxidoreductase YP_005542638.1 COG0500 SAM-dependent methyltransferases YP_005542641.1 COG2267 Lysophospholipase YP_005542642.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_005542643.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005542644.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_005542645.1 COG0192 S-adenosylmethionine synthetase YP_005542647.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_005542649.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005542650.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005542651.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005542652.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005542653.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005542654.1 COG4824 Phage-related holin (Lysis protein) YP_005542655.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005542658.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_005542659.1 COG0759 Uncharacterized conserved protein YP_005542660.1 COG0288 Carbonic anhydrase YP_005542661.1 COG0254 Ribosomal protein L31 YP_005542662.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005542663.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005542665.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005542666.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005542667.1 COG0447 Dihydroxynaphthoic acid synthase YP_005542668.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005542669.1 COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_005542670.1 COG1169 Isochorismate synthase YP_005542671.1 COG1734 DnaK suppressor protein YP_005542672.1 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) YP_005542674.1 COG3859 Predicted membrane protein YP_005542675.1 COG2268 Uncharacterized protein conserved in bacteria YP_005542678.1 COG2258 Uncharacterized protein conserved in bacteria YP_005542679.1 COG1454 Alcohol dehydrogenase, class IV YP_005542680.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005542681.1 COG1510 Predicted transcriptional regulators YP_005542682.1 COG0495 Leucyl-tRNA synthetase YP_005542683.1 COG0569 K+ transport systems, NAD-binding component YP_005542684.1 COG1705 Muramidase (flagellum-specific) YP_005542685.1 COG1017 Hemoglobin-like flavoprotein YP_005542691.1 COG0457 FOG: TPR repeat YP_005542698.1 COG3655 Predicted transcriptional regulator YP_005542701.1 COG0274 Deoxyribose-phosphate aldolase YP_005542706.1 COG4824 Phage-related holin (Lysis protein) YP_005542713.1 COG5283 Phage-related tail protein YP_005542722.1 COG3740 Phage head maturation protease YP_005542723.1 COG4695 Phage-related protein YP_005542725.1 COG4626 Phage terminase-like protein, large subunit YP_005542726.1 COG3747 Phage terminase, small subunit YP_005542739.1 COG3617 Prophage antirepressor YP_005542744.1 COG1396 Predicted transcriptional regulators YP_005542745.1 COG0582 Integrase YP_005542746.1 COG1968 Uncharacterized bacitracin resistance protein YP_005542747.1 COG0628 Predicted permease YP_005542748.1 COG0673 Predicted dehydrogenases and related proteins YP_005542749.1 COG0693 Putative intracellular protease/amidase; similar to RBAM_028280 YP_005542750.1 COG0840 Methyl-accepting chemotaxis protein YP_005542751.1 COG0840 Methyl-accepting chemotaxis protein YP_005542752.1 COG0840 Methyl-accepting chemotaxis protein YP_005542753.1 COG0840 Methyl-accepting chemotaxis protein YP_005542755.1 similar to RBAM_028340 YP_005542756.1 COG0432 Uncharacterized conserved protein YP_005542757.1 COG0366 Glycosidases YP_005542759.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005542760.1 COG2738 Predicted Zn-dependent protease YP_005542763.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_005542765.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005542766.1 COG0166 Glucose-6-phosphate isomerase YP_005542767.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_005542768.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_005542769.1 COG2155 Uncharacterized conserved protein YP_005542770.1 COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) YP_005542771.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005542772.1 COG1522 Transcriptional regulators YP_005542773.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005542775.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_005542776.1 COG0642 Signal transduction histidine kinase YP_005542778.1 COG5018 Inhibitor of the KinA pathway to sporulation, predicted exonuclease YP_005542779.1 COG0477 Permeases of the major facilitator superfamily YP_005542780.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005542781.1 COG3011 Uncharacterized protein conserved in bacteria YP_005542783.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005542784.1 COG4565 Response regulator of citrate/malate metabolism YP_005542785.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein YP_005542786.1 COG4603 ABC-type uncharacterized transport system, permease component YP_005542787.1 COG1079 Uncharacterized ABC-type transport system, permease component YP_005542789.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005542790.1 COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit YP_005542791.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_005542792.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005542793.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_005542794.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_005542795.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_005542796.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005542797.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005542799.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005542802.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_005542803.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_005542804.1 COG1335 Amidases related to nicotinamidase YP_005542805.1 COG5506 Uncharacterized conserved protein YP_005542808.1 COG0628 Predicted permease YP_005542810.1 COG1418 Predicted HD superfamily hydrolase YP_005542811.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005542813.1 COG1511 Predicted membrane protein YP_005542814.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005542815.1 COG4499 Predicted membrane protein YP_005542816.1 COG5417 Uncharacterized small protein YP_005542817.1 COG4842 Uncharacterized protein conserved in bacteria YP_005542818.1 COG2508 Regulator of polyketide synthase expression YP_005542819.1 COG0686 Alanine dehydrogenase YP_005542820.1 COG5634 Uncharacterized conserved protein YP_005542821.1 COG3251 Uncharacterized protein conserved in bacteria; similar to RBAM_029000 YP_005542822.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005542823.1 COG1535 Isochorismate hydrolase YP_005542824.1 COG1021 Peptide arylation enzymes YP_005542825.1 COG1169 Isochorismate synthase YP_005542826.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005542827.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_005542828.1 COG2041 Sulfite oxidase and related enzymes YP_005542829.1 COG1268 Uncharacterized conserved protein YP_005542830.1 COG2056 Predicted permease YP_005542831.1 COG0260 Leucyl aminopeptidase YP_005542832.1 COG1963 Uncharacterized protein conserved in bacteria YP_005542833.1 COG3584 Uncharacterized protein conserved in bacteria YP_005542836.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_005542838.1 COG0492 Thioredoxin reductase YP_005542840.1 COG0516 IMP dehydrogenase/GMP reductase YP_005542841.1 similar to RBAM_029190 YP_005542842.1 COG1300 Uncharacterized membrane protein; similar to RBAM_029200 YP_005542843.1 COG1131 ABC-type multidrug transport system, ATPase component; similar to RBAM_029210 YP_005542844.1 similar to RBAM_029220 YP_005542845.1 similar to RBAM_029230 YP_005542846.1 similar to RBAM_029240 YP_005542848.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005542849.1 COG3967 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) YP_005542853.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005542860.1 COG1705 Muramidase (flagellum-specific) YP_005542861.1 COG5283 Phage-related tail protein YP_005542862.1 COG5283 Phage-related tail protein YP_005542864.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005542872.1 COG0433 Predicted ATPase YP_005542875.1 COG1309 Transcriptional regulator YP_005542877.1 COG0582 Integrase YP_005542886.1 COG1396 Predicted transcriptional regulators YP_005542894.1 COG1396 Predicted transcriptional regulators YP_005542898.1 COG3655 Predicted transcriptional regulator YP_005542900.1 COG3355 Predicted transcriptional regulator YP_005542901.1 COG4974 Site-specific recombinase XerD YP_005542902.1 COG0316 Uncharacterized conserved protein YP_005542903.1 COG0253 Diaminopimelate epimerase YP_005542904.1 COG1972 Nucleoside permease YP_005542905.1 COG4844 Uncharacterized protein conserved in bacteria YP_005542906.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_005542907.1 COG4837 Uncharacterized protein conserved in bacteria YP_005542908.1 COG0694 Thioredoxin-like proteins and domains YP_005542909.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005542910.1 COG0083 Homoserine kinase YP_005542911.1 COG0498 Threonine synthase YP_005542912.1 COG0460 Homoserine dehydrogenase YP_005542914.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005542915.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005542916.1 COG2445 Uncharacterized conserved protein YP_005542917.1 COG4470 Uncharacterized protein conserved in bacteria YP_005542918.1 COG0320 Lipoate synthase YP_005542919.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005542921.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005542922.1 COG0730 Predicted permeases YP_005542923.1 COG1801 Uncharacterized conserved protein YP_005542924.1 COG0443 Molecular chaperone YP_005542925.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005542926.1 COG2508 Regulator of polyketide synthase expression YP_005542928.1 COG3517 Uncharacterized protein conserved in bacteria; similar to RBAM_029550 YP_005542929.1 COG0477 Permeases of the major facilitator superfamily; similar to RBAM_029570 YP_005542930.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_005542931.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005542932.1 COG2356 Endonuclease I YP_005542933.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005542934.1 COG2188 Transcriptional regulators YP_005542935.1 COG0524 Sugar kinases, ribokinase family YP_005542936.1 COG0395 ABC-type sugar transport system, permease component YP_005542937.1 COG1175 ABC-type sugar transport systems, permease components YP_005542938.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005542939.1 COG2222 Predicted phosphosugar isomerases YP_005542940.1 COG0789 Predicted transcriptional regulators; similar to RBAM_029680 YP_005542944.1 COG5658 Predicted integral membrane protein YP_005542945.1 COG0322 Nuclease subunit of the excinuclease complex YP_005542946.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005542947.1 COG0500 SAM-dependent methyltransferases; similar to RBAM_029720 YP_005542949.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_005542950.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005542951.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005542952.1 COG0520 Selenocysteine lyase YP_005542953.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005542954.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_005542956.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_005542957.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005542958.1 COG2011 ABC-type metal ion transport system, permease component YP_005542959.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005542961.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005542962.1 COG1658 Small primase-like proteins (Toprim domain) YP_005542964.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_005542965.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005542966.1 COG1960 Acyl-CoA dehydrogenases YP_005542967.1 COG0183 Acetyl-CoA acetyltransferase YP_005542968.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005542969.1 similar to RBAM_029930 YP_005542970.1 COG0506 Proline dehydrogenase YP_005542971.1 similar to RBAM_029950 YP_005542973.1 COG1846 Transcriptional regulators YP_005542974.1 COG0477 Permeases of the major facilitator superfamily YP_005542976.1 COG1396 Predicted transcriptional regulators YP_005542977.1 COG0863 DNA modification methylase YP_005542979.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005542981.1 COG1164 Oligoendopeptidase F YP_005542982.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005542983.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005542984.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005542985.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005542986.1 COG0642 Signal transduction histidine kinase YP_005542987.1 COG0366 Glycosidases YP_005542988.1 COG1309 Transcriptional regulator YP_005542989.1 COG0114 Fumarase YP_005542990.1 similar to RBAM_030170 YP_005542991.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005542992.1 COG0531 Amino acid transporters YP_005542994.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005542995.1 COG4585 Signal transduction histidine kinase YP_005542996.1 COG4758 Predicted membrane protein YP_005542997.1 COG3595 Uncharacterized conserved protein YP_005542998.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_005543000.1 COG0477 Permeases of the major facilitator superfamily YP_005543001.1 COG2096 Uncharacterized conserved protein YP_005543002.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005543003.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005543004.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005543005.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005543006.1 COG3386 Gluconolactonase YP_005543007.1 COG0642 Signal transduction histidine kinase YP_005543008.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005543010.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005543012.1 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes YP_005543014.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005543015.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005543016.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005543017.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005543018.1 COG3315 O-Methyltransferase involved in polyketide biosynthesis YP_005543019.1 COG0531 Amino acid transporters YP_005543021.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_005543022.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005543023.1 COG1910 Periplasmic molybdate-binding protein/domain YP_005543024.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005543025.1 COG4149 ABC-type molybdate transport system, permease component YP_005543026.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; similar to RBAM_030520 YP_005543027.1 COG4585 Signal transduction histidine kinase; similar to RBAM_030530; similar to RBAM_030530 YP_005543028.1 COG1131 ABC-type multidrug transport system, ATPase component; similar to RBAM_030540 YP_005543029.1 COG0842 ABC-type multidrug transport system, permease component; similar to RBAM_030550 YP_005543030.1 COG0842 ABC-type multidrug transport system, permease component; similar to RBAM_030560 YP_005543031.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005543033.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_005543034.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_005543035.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_005543036.1 COG3973 Superfamily I DNA and RNA helicases YP_005543037.1 COG2860 Predicted membrane protein YP_005543038.1 similar to RBAM_030640 YP_005543039.1 COG1495 Disulfide bond formation protein DsbB YP_005543040.1 COG1651 Protein-disulfide isomerase YP_005543041.1 COG2217 Cation transport ATPase YP_005543042.1 COG2217 Cation transport ATPase YP_005543043.1 COG2608 Copper chaperone YP_005543044.1 COG1937 Uncharacterized protein conserved in bacteria YP_005543045.1 COG0673 Predicted dehydrogenases and related proteins YP_005543046.1 COG1182 Acyl carrier protein phosphodiesterase YP_005543047.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005543048.1 COG0695 Glutaredoxin and related proteins YP_005543049.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005543050.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005543051.1 COG0765 ABC-type amino acid transport system, permease component YP_005543052.1 COG0765 ABC-type amino acid transport system, permease component YP_005543053.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005543054.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005543055.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005543056.1 COG0583 Transcriptional regulator YP_005543057.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005543058.1 COG2732 Barstar, RNAse (barnase) inhibitor YP_005543059.1 COG0691 tmRNA-binding protein YP_005543061.1 COG0557 Exoribonuclease R YP_005543062.1 COG1647 Esterase/lipase YP_005543063.1 COG1314 Preprotein translocase subunit SecG YP_005543064.1 COG1396 Predicted transcriptional regulators YP_005543065.1 COG1396 Predicted transcriptional regulators YP_005543066.1 COG1396 Predicted transcriptional regulators YP_005543067.1 COG1733 Predicted transcriptional regulators YP_005543068.1 COG0642 Signal transduction histidine kinase YP_005543069.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005543072.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005543073.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005543074.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_005543075.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005543076.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005543077.1 COG1510 Predicted transcriptional regulators YP_005543078.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005543079.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_005543080.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005543081.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005543082.1 COG1510 Predicted transcriptional regulators YP_005543083.1 COG2095 Multiple antibiotic transporter YP_005543086.1 COG4640 Predicted membrane protein YP_005543087.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005543088.1 COG0477 Permeases of the major facilitator superfamily; similar to RBAM_031160 YP_005543089.1 COG1082 Sugar phosphate isomerases/epimerases; similar to RBAM_031170 YP_005543090.1 COG2120 Uncharacterized proteins, LmbE homologs; similar to RBAM_031180 YP_005543091.1 similar to RBAM_031190 YP_005543092.1 COG2348 Uncharacterized protein involved in methicillin resistance; similar to RBAM_031200 YP_005543093.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; similar to RBAM_031210 YP_005543094.1 COG0451 Nucleoside-diphosphate-sugar epimerases; similar to RBAM_031220 YP_005543095.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005543096.1 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; similar to RBAM_031240 YP_005543097.1 COG2234 Predicted aminopeptidases YP_005543098.1 COG0148 Enolase YP_005543099.1 COG0696 Phosphoglyceromutase YP_005543100.1 COG0149 Triosephosphate isomerase YP_005543101.1 COG0126 3-phosphoglycerate kinase YP_005543102.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005543103.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_005543104.1 COG0477 Permeases of the major facilitator superfamily YP_005543105.1 COG1609 Transcriptional regulators YP_005543106.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005543107.1 COG0583 Transcriptional regulator YP_005543108.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005543109.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005543111.1 COG1737 Transcriptional regulators; similar to RBAM_031420 YP_005543112.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005543113.1 COG2610 H+/gluconate symporter and related permeases YP_005543114.1 COG1556 Uncharacterized conserved protein YP_005543115.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_005543116.1 COG0247 Fe-S oxidoreductase YP_005543117.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; similar to RBAM_031480; similar to RBAM_031480 YP_005543118.1 COG2186 Transcriptional regulators YP_005543119.1 COG1620 L-lactate permease YP_005543120.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005543122.1 COG5039 Exopolysaccharide biosynthesis protein YP_005543123.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005543124.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005543125.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_005543126.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005543127.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005543128.1 COG5039 Exopolysaccharide biosynthesis protein YP_005543129.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005543131.1 COG0438 Glycosyltransferase YP_005543132.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005543133.1 COG0438 Glycosyltransferase YP_005543134.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005543135.1 COG0489 ATPases involved in chromosome partitioning YP_005543136.1 COG3944 Capsular polysaccharide biosynthesis protein YP_005543137.1 COG1396 Predicted transcriptional regulators YP_005543138.1 COG2272 Carboxylesterase type B YP_005543139.1 similar to BAMF_3292 YP_005543140.1 COG0262 Dihydrofolate reductase YP_005543141.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005543142.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005543143.1 COG2364 Predicted membrane protein YP_005543144.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005543145.1 COG3479 Phenolic acid decarboxylase YP_005543147.1 similar to RBAM_031760 YP_005543148.1 similar to RBAM_031762 YP_005543149.1 similar to RBAM_031780 YP_005543150.1 similar to RBAM_031790 YP_005543151.1 similar to RBAM_031800 YP_005543153.1 COG1621 Beta-fructosidases (levanase/invertase); similar to RBAM_031820 YP_005543154.1 COG0477 Permeases of the major facilitator superfamily YP_005543155.1 COG1609 Transcriptional regulators; similar to RBAM_031840; similar to RBAM_031840 YP_005543156.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005543157.1 COG0583 Transcriptional regulator YP_005543158.1 COG2828 Uncharacterized protein conserved in bacteria YP_005543159.1 COG0477 Permeases of the major facilitator superfamily; similar to RBAM_031880 YP_005543161.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_005543162.1 COG1694 Predicted pyrophosphatase YP_005543163.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005543164.1 COG0288 Carbonic anhydrase YP_005543166.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005543167.1 COG4290 Guanyl-specific ribonuclease Sa; similar to RBAM_031940; similar to RBAM_031940 YP_005543168.1 COG2162 Arylamine N-acetyltransferase YP_005543169.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005543170.1 COG1481 Uncharacterized protein conserved in bacteria YP_005543171.1 COG0391 Uncharacterized conserved protein YP_005543172.1 COG1660 Predicted P-loop-containing kinase YP_005543173.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005543174.1 COG0492 Thioredoxin reductase YP_005543175.1 COG3883 Uncharacterized protein conserved in bacteria YP_005543176.1 COG0457 FOG: TPR repeat YP_005543177.1 COG0642 Signal transduction histidine kinase; similar to RBAM_032040; similar to RBAM_032040 YP_005543178.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; similar to RBAM_032050 YP_005543179.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005543180.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_005543181.1 COG0107 Imidazoleglycerol-phosphate synthase YP_005543182.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_005543183.1 COG0118 Glutamine amidotransferase YP_005543184.1 COG0131 Imidazoleglycerol-phosphate dehydratase YP_005543185.1 COG0141 Histidinol dehydrogenase YP_005543186.1 COG0040 ATP phosphoribosyltransferase YP_005543187.1 COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis YP_005543188.1 COG4990 Uncharacterized protein conserved in bacteria YP_005543189.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005543190.1 COG0546 Predicted phosphatases YP_005543191.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005543192.1 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism YP_005543193.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase YP_005543194.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005543195.1 COG2188 Transcriptional regulators YP_005543196.1 COG1309 Transcriptional regulator YP_005543197.1 COG1409 Predicted phosphohydrolases YP_005543198.1 COG1950 Predicted membrane protein YP_005543199.1 COG1983 Putative stress-responsive transcriptional regulator YP_005543200.1 COG3595 Uncharacterized conserved protein YP_005543203.1 COG0178 Excinuclease ATPase subunit YP_005543204.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005543205.1 COG4897 Uncharacterized protein conserved in bacteria YP_005543206.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005543207.1 COG1309 Transcriptional regulator YP_005543208.1 COG0477 Permeases of the major facilitator superfamily YP_005543209.1 COG3391 Uncharacterized conserved protein YP_005543210.1 COG3391 Uncharacterized conserved protein YP_005543211.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005543213.1 COG0793 Periplasmic protease YP_005543215.1 COG2177 Cell division protein YP_005543216.1 COG2884 Predicted ATPase involved in cell division YP_005543217.1 COG2010 Cytochrome c, mono- and diheme variants YP_005543218.1 COG1284 Uncharacterized conserved protein YP_005543219.1 COG1186 Protein chain release factor B YP_005543220.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005543221.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005543222.1 similar to RBAM_032470 YP_005543224.1 COG1516 Flagellin-specific chaperone FliS YP_005543225.1 COG1345 Flagellar capping protein YP_005543226.1 COG1344 Flagellin and related hook-associated proteins YP_005543227.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005543228.1 COG1699 Uncharacterized protein conserved in bacteria YP_005543230.1 COG1344 Flagellin and related hook-associated proteins YP_005543231.1 COG1256 Flagellar hook-associated protein YP_005543233.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_005543235.1 COG1040 Predicted amidophosphoribosyltransferases YP_005543237.1 COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) YP_005543238.1 COG1307 Uncharacterized protein conserved in bacteria YP_005543239.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005543240.1 COG4585 Signal transduction histidine kinase YP_005543241.1 COG1739 Uncharacterized conserved protein YP_005543242.1 COG1316 Transcriptional regulator YP_005543243.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005543244.1 COG0438 Glycosyltransferase YP_005543245.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005543248.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005543249.1 COG0438 Glycosyltransferase YP_005543250.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005543251.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_005543252.1 COG2247 Putative cell wall-binding domain YP_005543253.1 COG2247 Putative cell wall-binding domain YP_005543255.1 COG1316 Transcriptional regulator YP_005543256.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005543257.1 COG1210 UDP-glucose pyrophosphorylase YP_005543258.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005543259.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005543260.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_005543261.1 COG0438 Glycosyltransferase YP_005543262.1 COG0615 Cytidylyltransferase YP_005543263.1 COG1922 Teichoic acid biosynthesis proteins YP_005543264.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_005543265.1 COG4193 Beta- N-acetylglucosaminidase YP_005543266.1 COG1482 Phosphomannose isomerase YP_005543268.1 COG0531 Amino acid transporters YP_005543270.1 COG1216 Predicted glycosyltransferases; similar to RBAM_032950 YP_005543271.1 COG0477 Permeases of the major facilitator superfamily YP_005543272.1 COG1316 Transcriptional regulator YP_005543273.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005543275.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005543277.1 COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) YP_005543279.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005543282.1 COG0814 Amino acid permeases YP_005543284.1 COG1609 Transcriptional regulators YP_005543285.1 COG0524 Sugar kinases, ribokinase family YP_005543286.1 COG1869 ABC-type ribose transport system, auxiliary component YP_005543287.1 COG1129 ABC-type sugar transport system, ATPase component YP_005543288.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005543289.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005543291.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005543292.1 COG3527 Alpha-acetolactate decarboxylase YP_005543293.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_005543294.1 COG0583 Transcriptional regulator YP_005543295.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_005543298.1 COG5337 Spore coat assembly protein YP_005543299.1 COG0065 3-isopropylmalate dehydratase large subunit YP_005543300.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005543302.1 COG0405 Gamma-glutamyltransferase YP_005543303.1 COG1522 Transcriptional regulators YP_005543304.1 COG2059 Chromate transport protein ChrA YP_005543305.1 COG2059 Chromate transport protein ChrA YP_005543307.1 similar to RBAM_033320 YP_005543314.1 COG3878 Uncharacterized protein conserved in bacteria YP_005543315.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005543318.1 COG4464 Capsular polysaccharide biosynthesis protein YP_005543319.1 COG0489 ATPases involved in chromosome partitioning YP_005543320.1 COG3944 Capsular polysaccharide biosynthesis protein YP_005543323.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005543324.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005543325.1 COG1349 Transcriptional regulators of sugar metabolism YP_005543326.1 COG0629 Single-stranded DNA-binding protein YP_005543329.1 COG1970 Large-conductance mechanosensitive channel YP_005543330.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005543331.1 COG0457 FOG: TPR repeat YP_005543332.1 COG4786 Flagellar basal body rod protein YP_005543333.1 COG4786 Flagellar basal body rod protein YP_005543334.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005543335.1 COG1609 Transcriptional regulators YP_005543336.1 COG1846 Transcriptional regulators YP_005543337.1 COG0477 Permeases of the major facilitator superfamily YP_005543338.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_005543339.1 COG1335 Amidases related to nicotinamidase YP_005543340.1 COG0004 Ammonia permease YP_005543341.1 COG0347 Nitrogen regulatory protein PII YP_005543342.1 COG0772 Bacterial cell division membrane protein; similar to RBAM_033700 YP_005543343.1 COG0671 Membrane-associated phospholipid phosphatase YP_005543345.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005543346.1 COG1247 Sortase and related acyltransferases YP_005543350.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005543353.1 COG2910 Putative NADH-flavin reductase YP_005543354.1 COG1959 Predicted transcriptional regulator YP_005543355.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_005543356.1 COG0832 Urea amidohydrolase (urease) beta subunit YP_005543357.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_005543358.1 COG3237 Uncharacterized protein conserved in bacteria YP_005543360.1 COG0457 FOG: TPR repeat YP_005543361.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_005543362.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_005543364.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_005543365.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_005543366.1 COG2385 Sporulation protein and related proteins YP_005543367.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005543369.1 COG4836 Predicted membrane protein YP_005543371.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005543372.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005543373.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005543374.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005543375.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005543376.1 COG0711 F0F1-type ATP synthase, subunit b YP_005543377.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005543378.1 COG0356 F0F1-type ATP synthase, subunit a YP_005543380.1 COG0035 Uracil phosphoribosyltransferase YP_005543381.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005543382.1 COG4475 Uncharacterized protein conserved in bacteria YP_005543383.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005543384.1 COG0394 Protein-tyrosine-phosphatase YP_005543385.1 COG1971 Predicted membrane protein YP_005543386.1 COG0009 Putative translation factor (SUA5) YP_005543392.1 COG2890 Methylase of polypeptide chain release factors YP_005543393.1 COG0216 Protein chain release factor A YP_005543394.1 COG0346 Lactoylglutathione lyase and related lyases YP_005543395.1 COG0789 Predicted transcriptional regulators YP_005543396.1 COG0679 Predicted permeases YP_005543397.1 COG0281 Malic enzyme YP_005543398.1 COG1435 Thymidine kinase YP_005543399.1 COG0254 Ribosomal protein L31 YP_005543401.1 COG1158 Transcription termination factor YP_005543402.1 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins YP_005543403.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005543404.1 COG0176 Transaldolase YP_005543405.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005543406.1 COG0784 FOG: CheY-like receiver YP_005543408.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005543409.1 COG3343 DNA-directed RNA polymerase, delta subunit YP_005543410.1 COG0247 Fe-S oxidoreductase YP_005543411.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005543412.1 COG4294 UV damage repair endonuclease YP_005543414.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005543415.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005543416.1 COG2181 Nitrate reductase gamma subunit YP_005543417.1 COG2180 Nitrate reductase delta subunit YP_005543418.1 COG1140 Nitrate reductase beta subunit YP_005543419.1 COG5013 Nitrate reductase alpha subunit YP_005543422.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_005543423.1 COG2223 Nitrate/nitrite transporter YP_005543424.1 COG0018 Arginyl-tRNA synthetase YP_005543425.1 COG4506 Uncharacterized protein conserved in bacteria YP_005543427.1 COG3391 Uncharacterized conserved protein YP_005543428.1 COG0457 FOG: TPR repeat YP_005543430.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005543431.1 COG0421 Spermidine synthase YP_005543432.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005543433.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase; similar to RBAM_034640 YP_005543435.1 COG1994 Zn-dependent proteases YP_005543436.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005543437.1 COG1846 Transcriptional regulators YP_005543438.1 COG0531 Amino acid transporters; similar to RBAM_034690 YP_005543439.1 COG3465 Uncharacterized conserved protein YP_005543440.1 COG1078 HD superfamily phosphohydrolases YP_005543444.1 COG1695 Predicted transcriptional regulators; similar to RBAM_034740 YP_005543445.1 COG4709 Predicted membrane protein; similar to RBAM_034750 YP_005543446.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; similar to RBAM_034770 YP_005543447.1 similar to RBAM_034780 YP_005543448.1 similar to RBAM_034800 YP_005543449.1 similar to RBAM_034810 YP_005543450.1 COG0095 Lipoate-protein ligase A YP_005543451.1 COG0583 Transcriptional regulator YP_005543452.1 COG2855 Predicted membrane protein; similar to RBAM_034840 YP_005543453.1 COG0280 Phosphotransacetylase YP_005543454.1 COG3253 Uncharacterized conserved protein YP_005543455.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005543456.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005543457.1 COG0477 Permeases of the major facilitator superfamily YP_005543458.1 COG0439 Biotin carboxylase YP_005543459.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005543460.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005543462.1 COG2814 Arabinose efflux permease YP_005543463.1 COG0477 Permeases of the major facilitator superfamily; similar to RBAM_034950 YP_005543464.1 COG0833 Amino acid transporters YP_005543465.1 COG4187 Arginine degradation protein (predicted deacylase) YP_005543466.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005543468.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005543470.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_005543471.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_005543472.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_005543473.1 COG1209 dTDP-glucose pyrophosphorylase YP_005543474.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_005543475.1 COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog YP_005543476.1 COG2089 Sialic acid synthase YP_005543477.1 COG0456 Acetyltransferases YP_005543478.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005543479.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_005543480.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005543482.1 COG2363 Uncharacterized small membrane protein YP_005543483.1 COG2233 Xanthine/uracil permeases YP_005543485.1 COG0692 Uracil DNA glycosylase YP_005543486.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005543488.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005543490.1 COG1621 Beta-fructosidases (levanase/invertase) YP_005543491.1 COG1264 Phosphotransferase system IIB components YP_005543492.1 COG3711 Transcriptional antiterminator YP_005543494.1 COG1404 Subtilisin-like serine proteases YP_005543495.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005543496.1 COG2378 Predicted transcriptional regulator YP_005543497.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005543500.1 COG0778 Nitroreductase YP_005543501.1 COG0772 Bacterial cell division membrane protein YP_005543502.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005543504.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_005543505.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005543506.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005543507.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005543508.1 COG2261 Predicted membrane protein YP_005543509.1 COG4468 Galactose-1-phosphate uridyltransferase YP_005543510.1 COG0153 Galactokinase YP_005543511.1 COG2246 Predicted membrane protein YP_005543512.1 COG1309 Transcriptional regulator YP_005543513.1 similar to RBAM_035490 YP_005543514.1 COG0500 SAM-dependent methyltransferases; similar to RBAM_035500 YP_005543515.1 similar to RBAM_035510 YP_005543516.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_005543517.1 COG2837 Predicted iron-dependent peroxidase YP_005543518.1 COG2822 Predicted periplasmic lipoprotein involved in iron transport YP_005543519.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005543520.1 COG0352 Thiamine monophosphate synthase YP_005543521.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005543522.1 COG0583 Transcriptional regulator YP_005543523.1 COG1380 Putative effector of murein hydrolase LrgA YP_005543524.1 COG1346 Putative effector of murein hydrolase YP_005543525.1 COG4895 Uncharacterized conserved protein YP_005543526.1 COG0789 Predicted transcriptional regulators; similar to RBAM_035610; similar to RBAM_035610 YP_005543527.1 COG5504 Predicted Zn-dependent protease; similar to RBAM_035620 YP_005543528.1 COG1092 Predicted SAM-dependent methyltransferases YP_005543529.1 COG0346 Lactoylglutathione lyase and related lyases YP_005543530.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005543531.1 COG1404 Subtilisin-like serine proteases YP_005543532.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005543534.1 COG2357 Uncharacterized protein conserved in bacteria YP_005543535.1 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_005543536.1 similar to RBAM_035700 YP_005543537.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005543538.1 COG1696 Predicted membrane protein involved in D-alanine export YP_005543539.1 COG0236 Acyl carrier protein YP_005543540.1 COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) YP_005543541.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005543542.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_005543543.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_005543544.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005543545.1 COG1440 Phosphotransferase system cellobiose-specific component IIB YP_005543546.1 COG3711 Transcriptional antiterminator YP_005543548.1 COG2094 3-methyladenine DNA glycosylase YP_005543549.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component; similar to RBAM_035820 YP_005543550.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component; similar to RBAM_035830 YP_005543551.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; similar to RBAM_035840 YP_005543552.1 COG0640 Predicted transcriptional regulators YP_005543553.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_005543554.1 COG1440 Phosphotransferase system cellobiose-specific component IIB YP_005543555.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_005543556.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005543557.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005543558.1 COG1940 Transcriptional regulator/sugar kinase YP_005543559.1 COG1482 Phosphomannose isomerase YP_005543560.1 COG4124 Beta-mannanase YP_005543561.1 COG0753 Catalase YP_005543562.1 COG3049 Penicillin V acylase and related amidases YP_005543563.1 COG1457 Purine-cytosine permease and related proteins YP_005543564.1 COG0063 Predicted sugar kinase YP_005543565.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_005543566.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_005543567.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005543568.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005543569.1 COG3493 Na+/citrate symporter YP_005543570.1 COG0726 Predicted xylanase/chitin deacetylase YP_005543571.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005543572.1 COG2508 Regulator of polyketide synthase expression YP_005543573.1 COG1284 Uncharacterized conserved protein YP_005543576.1 COG1087 UDP-glucose 4-epimerase YP_005543577.1 COG2195 Di- and tripeptidases YP_005543580.1 COG4894 Uncharacterized conserved protein YP_005543581.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005543582.1 COG0500 SAM-dependent methyltransferases YP_005543583.1 COG1972 Nucleoside permease YP_005543584.1 similar to RBAM_036150 YP_005543586.1 COG1196 Chromosome segregation ATPases YP_005543587.1 COG0753 Catalase YP_005543588.1 COG2851 H+/citrate symporter YP_005543589.1 COG2273 Beta-glucanase/Beta-glucan synthetase YP_005543590.1 COG3711 Transcriptional antiterminator YP_005543591.1 COG2270 Permeases of the major facilitator superfamily YP_005543592.1 COG0513 Superfamily II DNA and RNA helicases YP_005543593.1 similar to RBAM_036230 YP_005543600.1 similar to RBAM_036310 YP_005543602.1 COG3866 Pectate lyase YP_005543603.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005543604.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005543605.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005543606.1 COG1264 Phosphotransferase system IIB components YP_005543607.1 COG3727 DNA G:T-mismatch repair endonuclease YP_005543608.1 COG0270 Site-specific DNA methylase YP_005543609.1 COG0326 Molecular chaperone, HSP90 family YP_005543613.1 COG3507 Beta-xylosidase YP_005543615.1 COG2986 Histidine ammonia-lyase YP_005543616.1 COG2987 Urocanate hydratase YP_005543617.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_005543618.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005543619.1 COG0833 Amino acid transporters YP_005543620.1 COG0213 Thymidine phosphorylase YP_005543621.1 COG1972 Nucleoside permease YP_005543622.1 COG0274 Deoxyribose-phosphate aldolase YP_005543623.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_005543624.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005543630.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005543631.1 COG5294 Uncharacterized protein conserved in bacteria YP_005543632.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005543633.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005543634.1 COG0642 Signal transduction histidine kinase YP_005543635.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005543636.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005543637.1 COG1082 Sugar phosphate isomerases/epimerases YP_005543638.1 COG1082 Sugar phosphate isomerases/epimerases YP_005543639.1 COG0673 Predicted dehydrogenases and related proteins YP_005543640.1 COG0477 Permeases of the major facilitator superfamily YP_005543641.1 COG1082 Sugar phosphate isomerases/epimerases YP_005543642.1 COG3962 Acetolactate synthase YP_005543643.1 COG0524 Sugar kinases, ribokinase family YP_005543644.1 COG3718 Uncharacterized enzyme involved in inositol metabolism YP_005543645.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005543646.1 COG1349 Transcriptional regulators of sugar metabolism YP_005543647.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005543648.1 COG0477 Permeases of the major facilitator superfamily YP_005543649.1 COG0326 Molecular chaperone, HSP90 family YP_005543650.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005543651.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005543652.1 COG4585 Signal transduction histidine kinase YP_005543653.1 COG3239 Fatty acid desaturase YP_005543654.1 COG1309 Transcriptional regulator YP_005543655.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005543656.1 COG1520 FOG: WD40-like repeat YP_005543658.1 COG0640 Predicted transcriptional regulators YP_005543659.1 COG2814 Arabinose efflux permease; similar to RBAM_036930; similar to RBAM_036930 YP_005543660.1 COG1714 Predicted membrane protein/domain YP_005543661.1 COG2514 Predicted ring-cleavage extradiol dioxygenase; similar to RBAM_036950 YP_005543662.1 COG0450 Peroxiredoxin YP_005543663.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_005543664.1 COG3386 Gluconolactonase YP_005543665.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005543666.1 COG2378 Predicted transcriptional regulator YP_005543667.1 COG3708 Uncharacterized protein conserved in bacteria YP_005543670.1 COG3855 Uncharacterized protein conserved in bacteria YP_005543671.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; similar to RBAM_037010; similar to RBAM_037010 YP_005543672.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; similar to RBAM_037020 YP_005543673.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; similar to RBAM_037030 YP_005543674.1 COG2068 Uncharacterized MobA-related protein; similar to RBAM_037040 YP_005543675.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; similar to RBAM_037050 YP_005543676.1 COG4129 Predicted membrane protein; similar to RBAM_037060 YP_005543680.1 COG0210 Superfamily I DNA and RNA helicases YP_005543681.1 COG0210 Superfamily I DNA and RNA helicases YP_005543682.1 COG3593 Predicted ATP-dependent endonuclease of the OLD family YP_005543683.1 COG1576 Uncharacterized conserved protein YP_005543688.1 COG3863 Uncharacterized distant relative of cell wall-associated hydrolases YP_005543689.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); similar to RBAM_037200; similar to RBAM_037200 YP_005543690.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005543692.1 COG0457 FOG: TPR repeat; similar to RBAM_037220 YP_005543693.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005543694.1 COG0833 Amino acid transporters YP_005543695.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005543696.1 COG5658 Predicted integral membrane protein YP_005543697.1 COG0640 Predicted transcriptional regulators YP_005543698.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_005543699.1 COG0477 Permeases of the major facilitator superfamily; similar to RBAM_037290 YP_005543701.1 COG0642 Signal transduction histidine kinase; similar to RBAM_037320; similar to RBAM_037320 YP_005543702.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005543703.1 COG3212 Predicted membrane protein YP_005543704.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005543705.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005543706.1 COG4853 Uncharacterized protein conserved in bacteria YP_005543707.1 COG4863 Uncharacterized protein conserved in bacteria YP_005543708.1 COG5002 Signal transduction histidine kinase YP_005543709.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005543711.1 COG0104 Adenylosuccinate synthase YP_005543712.1 COG0104 Adenylosuccinate synthase YP_005543713.1 COG0346 Lactoylglutathione lyase and related lyases YP_005543714.1 COG0305 Replicative DNA helicase YP_005543717.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005543718.1 COG0438 Glycosyltransferase; similar to RBAM_037520 YP_005543719.1 similar to RBAM_037530 YP_005543720.1 COG0439 Biotin carboxylase; similar to RBAM_037540 YP_005543721.1 COG0438 Glycosyltransferase; similar to RBAM_037550; similar to RBAM_037550 YP_005543722.1 COG2120 Uncharacterized proteins, LmbE homologs; similar to RBAM_037560 YP_005543723.1 COG0515 Serine/threonine protein kinase; similar to RBAM_037570; similar to RBAM_037570 YP_005543724.1 COG0359 Ribosomal protein L9 YP_005543725.1 COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain YP_005543726.1 COG4241 Predicted membrane protein YP_005543728.1 COG5577 Spore coat protein YP_005543729.1 COG1733 Predicted transcriptional regulators YP_005543730.1 COG1227 Inorganic pyrophosphatase/exopolyphosphatase YP_005543731.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; similar to RBAM_037640 YP_005543733.1 COG1621 Beta-fructosidases (levanase/invertase) YP_005543734.1 COG1802 Transcriptional regulators; similar to RBAM_037670 YP_005543735.1 COG2318 Uncharacterized protein conserved in bacteria YP_005543736.1 COG0477 Permeases of the major facilitator superfamily YP_005543737.1 COG3759 Predicted membrane protein; similar to RBAM_037750 YP_005543738.1 COG0778 Nitroreductase YP_005543739.1 COG1846 Transcriptional regulators YP_005543740.1 COG1284 Uncharacterized conserved protein YP_005543741.1 COG1846 Transcriptional regulators YP_005543742.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005543743.1 COG2318 Uncharacterized protein conserved in bacteria; similar to RBAM_005550 YP_005543744.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005543745.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005543746.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_005543747.1 COG3344 Retron-type reverse transcriptase YP_005543748.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_005543749.1 COG1266 Predicted metal-dependent membrane protease YP_005543750.1 COG0477 Permeases of the major facilitator superfamily YP_005543751.1 COG0346 Lactoylglutathione lyase and related lyases YP_005543752.1 COG1609 Transcriptional regulators YP_005543753.1 COG0708 Exonuclease III YP_005543754.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005543755.1 COG2169 Adenosine deaminase YP_005543756.1 COG0238 Ribosomal protein S18 YP_005543757.1 COG0629 Single-stranded DNA-binding protein YP_005543758.1 COG0360 Ribosomal protein S6 YP_005543759.1 COG0012 Predicted GTPase, probable translation factor YP_005543760.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005543761.1 COG4481 Uncharacterized protein conserved in bacteria YP_005543762.1 COG3949 Uncharacterized membrane protein YP_005543763.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; similar to RBAM_038050; similar to RBAM_038050 YP_005543765.1 COG1475 Predicted transcriptional regulators YP_005543766.1 COG1192 ATPases involved in chromosome partitioning YP_005543767.1 COG1475 Predicted transcriptional regulators YP_005543768.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005543769.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005543770.1 COG0486 Predicted GTPase YP_005543771.1 COG1847 Predicted RNA-binding protein YP_005543772.1 COG0706 Preprotein translocase subunit YidC YP_005543773.1 COG0594 RNase P protein component