-- dump date 20240506_022919 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP016210.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP016210.1.REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular BiologyREFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana.REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8;REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v.REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400xREFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 2 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 2 of 9 Pseudo Genes (incomplete) :: 7 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 2 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 2 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 Pseudo Genes (multiple problems) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 2 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 Pseudo Genes (multiple problems) :: 1 of 9 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP016210.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA is available from Biochemistry and Molecular Biology Department of Universidade Federal do Parana. ##Genome-Assembly-Data-START## Assembly Method :: Newbler GS de novo assembler v. 2.8; Velvet v. 1.2.08; CLC De novo assembler v. 7.5 Assembly Name :: A_olearius_DQS4T_genome_v1 Genome Coverage :: 400x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/04/2024 11:47:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,120 CDSs (total) :: 4,050 Genes (coding) :: 4,041 CDSs (with protein) :: 4,041 Genes (RNA) :: 70 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 2 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 Pseudo Genes (multiple problems) :: 1 of 9 ##Genome-Annotation-Data-END## COMPLETENESS: full length.