-- dump date 20140618_205544 -- class Genbank::CDS -- table cds_note -- id note YP_004239357.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_004239358.1 PFAM: DNA polymerase III subunit beta, C-terminal domain; DNA polymerase III subunit beta, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III subunit beta YP_004239359.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating) YP_004239360.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_004239361.1 PFAM: protein of unknown function (DUF721) YP_004239362.1 PFAM: Toprim domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase subunit beta, carboxyl terminus; TIGRFAM: DNA gyrase subunit beta YP_004239363.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase subunit alpha YP_004239364.1 PFAM: transmembrane domain of unknown function (DUF3566) YP_004239366.1 PFAM: EamA-like transporter family YP_004239367.1 PFAM: glycosyl transferase family 2 YP_004239369.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_004239370.1 PFAM: B-box zinc finger; Rhomboid family YP_004239371.1 PFAM: carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_004239372.1 PFAM: methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I YP_004239373.1 PFAM: Uncharacterised protein family (UPF0233) YP_004239374.1 PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein YP_004239376.1 PFAM: glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase or aminodeoxychorismate synthase YP_004239377.1 PFAM: protein kinase domain; PASTA domain YP_004239378.1 PFAM: protein kinase domain; PASTA domain YP_004239379.1 PFAM: Penicillin binding protein transpeptidase domain YP_004239380.1 PFAM: cell cycle protein YP_004239381.1 PFAM: protein phosphatase 2C YP_004239382.1 PFAM: FHA domain YP_004239383.1 PFAM: protein of unknown function (DUF2662); FHA domain YP_004239384.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004239385.1 PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004239386.1 PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family YP_004239387.1 PFAM: Flavin containing amine oxidoreductase YP_004239388.1 PFAM: pyridoxamine 5'-phosphate oxidase YP_004239391.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain YP_004239393.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004239395.1 PFAM: LysR substrate binding domain YP_004239396.1 PFAM: protein of unknown function (DUF3618) YP_004239397.1 PFAM: protein of unknown function (DUF1469) YP_004239399.1 PFAM: MarR family YP_004239404.1 PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain YP_004239405.1 PFAM: amidase YP_004239406.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_004239408.1 PFAM: Sodium:neurotransmitter symporter family YP_004239411.1 PFAM: Bacterial extracellular solute-binding protein YP_004239412.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239413.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239414.1 PFAM: glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase YP_004239415.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004239416.1 PFAM: protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_004239417.1 PFAM: Natural resistance-associated macrophage protein YP_004239419.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_004239421.1 PFAM: phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_004239422.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_004239423.1 PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain YP_004239424.1 PFAM: dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, subunit alpha YP_004239425.1 PFAM: AMP-binding enzyme YP_004239427.1 PFAM: phosphoribosyl transferase domain; Dienelactone hydrolase family YP_004239428.1 PFAM: Erythromycin esterase YP_004239429.1 PFAM: protein of unknown function (DUF2029) YP_004239430.1 PFAM: protein of unknown function (DUF2029) YP_004239432.1 PFAM: protein of unknown function (DUF3072) YP_004239434.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004239435.1 PFAM: tripartite tricarboxylate transporter TctB family YP_004239436.1 PFAM: tripartite tricarboxylate transporter TctA family YP_004239437.1 PFAM: tripartite tricarboxylate transporter family receptor YP_004239438.1 PFAM: Demethylmenaquinone methyltransferase YP_004239439.1 PFAM: Domain of unknown function (DUF1932); NAD binding domain of 6-phosphogluconate dehydrogenase YP_004239440.1 PFAM: DctM-like transporters YP_004239442.1 PFAM: cyclase YP_004239443.1 PFAM: short chain dehydrogenase YP_004239444.1 PFAM: Major Facilitator Superfamily YP_004239445.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004239446.1 PFAM: Major Facilitator Superfamily YP_004239447.1 PFAM: MOSC domain YP_004239448.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_004239449.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004239450.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004239452.1 PFAM: acetyltransferase (GNAT) family YP_004239453.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004239455.1 PFAM: ABC transporter YP_004239456.1 PFAM: Branched-chain amino acid transporter / permease YP_004239457.1 PFAM: Branched-chain amino acid transporter / permease YP_004239460.1 PFAM: GMC oxidoreductase YP_004239461.1 PFAM: aldehyde dehydrogenase family YP_004239462.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004239463.1 PFAM: protein of unknown function (DUF993) YP_004239464.1 PFAM: glycerate kinase family; TIGRFAM: glycerate kinase YP_004239466.1 PFAM: Phage integrase family YP_004239469.1 PFAM: META domain YP_004239471.1 PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase YP_004239473.1 PFAM: malate/L-lactate dehydrogenase YP_004239474.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_004239475.1 PFAM: tripartite ATP-independent periplasmic transporters, DctQ component YP_004239476.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter DctM subunit YP_004239477.1 PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004239478.1 PFAM: aldehyde dehydrogenase family YP_004239479.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004239480.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004239481.1 PFAM: short chain dehydrogenase YP_004239482.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004239483.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004239484.1 PFAM: Trehalose utilisation YP_004239485.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_004239486.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004239487.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239488.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239489.1 PFAM: Bacterial extracellular solute-binding protein YP_004239490.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004239491.1 PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004239493.1 PFAM: hemerythrin HHE cation binding domain YP_004239494.1 PFAM: Helix-turn-helix YP_004239495.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_004239496.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase YP_004239497.1 PFAM: Domain of unknown function (DUF299) YP_004239498.1 PFAM: ROK family YP_004239499.1 PFAM: glycosyl hydrolase family 10 YP_004239500.1 PFAM: glycosyl hydrolase family 3 C terminal domain; glycosyl hydrolase family 3 N terminal domain YP_004239501.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239502.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239503.1 PFAM: Bacterial extracellular solute-binding protein YP_004239504.1 PFAM: glycosyl hydrolase family 10 YP_004239505.1 PFAM: Region found in RelA / SpoT proteins YP_004239506.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004239507.1 PFAM: EamA-like transporter family YP_004239508.1 PFAM: B3/4 domain YP_004239509.1 PFAM: Cupin domain; Helix-turn-helix YP_004239510.1 PFAM: aldehyde dehydrogenase family YP_004239511.1 PFAM: GYD domain YP_004239512.1 PFAM: alpha/beta hydrolase fold YP_004239513.1 PFAM: pfkB family carbohydrate kinase YP_004239514.1 PFAM: Trehalose utilisation YP_004239515.1 PFAM: Xylose isomerase-like TIM barrel YP_004239517.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004239518.1 PFAM: Bacterial extracellular solute-binding protein YP_004239519.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239520.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239521.1 PFAM: Xylose isomerase-like TIM barrel YP_004239522.1 PFAM: GMC oxidoreductase; TIGRFAM: pyranose oxidase YP_004239524.1 PFAM: Xylose isomerase-like TIM barrel YP_004239525.1 PFAM: Xylose isomerase-like TIM barrel YP_004239528.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004239529.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_004239531.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004239534.1 PFAM: ROK family YP_004239535.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004239537.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily YP_004239538.1 PFAM: GMC oxidoreductase; TIGRFAM: pyranose oxidase YP_004239539.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_004239540.1 PFAM: DoxX YP_004239541.1 PFAM: short chain dehydrogenase YP_004239542.1 PFAM: short chain dehydrogenase YP_004239543.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004239544.1 PFAM: Amidohydrolase YP_004239545.1 PFAM: FAD binding domain YP_004239546.1 PFAM: cyclase YP_004239547.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004239548.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: catechol 2,3 dioxygenase YP_004239550.1 PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter substrate-binding protein, aliphatic sulfonates family YP_004239551.1 PFAM: Bacterial regulatory proteins, tetR family YP_004239552.1 PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase YP_004239553.1 PFAM: aldehyde dehydrogenase family YP_004239554.1 PFAM: Amino acid permease; TIGRFAM: permease, urea carboxylase system YP_004239555.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_004239556.1 PFAM: peptidase S24-like YP_004239558.1 PFAM: polysaccharide deacetylase YP_004239559.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin YP_004239560.1 PFAM: Purine catabolism regulatory protein-like family YP_004239561.1 PFAM: protein of unknown function (DUF559) YP_004239562.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_004239563.1 PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form YP_004239564.1 PFAM: Sarcosine oxidase subunit gamma family; TIGRFAM: sarcosine oxidase subunit gamma family, heterotetrameric form YP_004239565.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Aminomethyltransferase folate-binding domain; glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: sarcosine oxidase subunit alpha family, heterotetrameric form YP_004239566.1 PFAM: Sarcosine oxidase subunit delta family; TIGRFAM: sarcosine oxidase subunit delta family, heterotetrameric form YP_004239567.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase subunit beta family, heterotetrameric form YP_004239568.1 PFAM: serine hydroxymethyltransferase YP_004239569.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004239570.1 PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter YP_004239571.1 PFAM: polysaccharide deacetylase YP_004239572.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase YP_004239573.1 PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase YP_004239574.1 PFAM: Bacterial regulatory proteins, luxR family YP_004239575.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004239576.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_004239577.1 PFAM: Rieske [2Fe-2S] domain YP_004239578.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; oxidoreductase FAD-binding domain; oxidoreductase NAD-binding domain YP_004239579.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_004239580.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_004239581.1 PFAM: Aminomethyltransferase folate-binding domain; glycine cleavage T-protein C-terminal barrel domain; FAD dependent oxidoreductase YP_004239584.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit YP_004239585.1 PFAM: metallo-beta-lactamase superfamily YP_004239586.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase YP_004239587.1 PFAM: Major Facilitator Superfamily YP_004239588.1 PFAM: metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_004239589.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004239590.1 PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II YP_004239591.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, N-terminal domain YP_004239592.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_004239594.1 PFAM: glycerophosphoryl diester phosphodiesterase family YP_004239597.1 PFAM: EAL domain YP_004239598.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_004239599.1 PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004239603.1 PFAM: short chain dehydrogenase YP_004239604.1 PFAM: glycerate kinase family; TIGRFAM: glycerate kinase YP_004239607.1 PFAM: short chain dehydrogenase YP_004239609.1 PFAM: glycosyl transferase family 2 YP_004239610.1 PFAM: GAF domain YP_004239611.1 PFAM: GDSL-like Lipase/acylhydrolase YP_004239612.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_004239613.1 PFAM: nitroreductase family YP_004239615.1 PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific YP_004239616.1 PFAM: Nuclease-related domain YP_004239618.1 PFAM: Berberine and berberine like; FAD binding domain YP_004239619.1 PFAM: protein of unknown function (DUF1049) YP_004239622.1 PFAM: amidase YP_004239623.1 PFAM: Rhodanese-like domain YP_004239624.1 PFAM: prephenate dehydratase; ACT domain YP_004239626.1 PFAM: diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family YP_004239627.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_004239629.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_004239630.1 PFAM: phosphoglycerate mutase family YP_004239632.1 PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain YP_004239633.1 PFAM: protein of unknown function (DUF429) YP_004239634.1 PFAM: carboxylesterase YP_004239635.1 PFAM: inorganic pyrophosphatase YP_004239636.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family YP_004239637.1 PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: hydrolase; uncharacterized protein, coenzyme F420 biosynthesis associated YP_004239638.1 PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain YP_004239639.1 PFAM: phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_004239640.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004239641.1 PFAM: peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_004239642.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_004239643.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_004239644.1 PFAM: dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_004239645.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_004239646.1 PFAM: protein of unknown function (DUF3180) YP_004239647.1 PFAM: Bacterial membrane flanked domain YP_004239648.1 PFAM: Bacterial membrane flanked domain YP_004239649.1 PFAM: Domain of unknown function (DUF2520); Rossmann-like domain YP_004239650.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase YP_004239651.1 PFAM: Bacterial regulatory proteins, tetR family YP_004239652.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004239653.1 PFAM: alpha amylase, catalytic domain YP_004239654.1 PFAM: Bacterial extracellular solute-binding protein YP_004239655.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239656.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239657.1 PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease PfpI family YP_004239658.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily YP_004239659.1 PFAM: alpha/beta hydrolase fold YP_004239660.1 PFAM: Bacterial regulatory proteins, tetR family YP_004239661.1 PFAM: Amino acid permease; TIGRFAM: permease, urea carboxylase system YP_004239662.1 PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 2 YP_004239663.1 PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 1 YP_004239664.1 PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; allophanate hydrolase subunit 2; carbamoyl-phosphate synthase L chain, N-terminal domain; allophanate hydrolase subunit 1; Biotin-requiring enzyme; TIGRFAM: urea carboxylase; biotin-dependent carboxylase uncharacterized domain YP_004239665.1 PFAM: amidase; TIGRFAM: allophanate hydrolase YP_004239666.1 PFAM: alpha/beta hydrolase fold YP_004239667.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_004239669.1 PFAM: Lsr2 YP_004239671.1 PFAM: prolyl oligopeptidase family YP_004239672.1 PFAM: acetyltransferase (GNAT) family YP_004239673.1 PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit YP_004239674.1 PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit YP_004239675.1 PFAM: PTS system fructose IIA component; PTS HPr component phosphorylation site; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; phosphotransferase System HPr (HPr) Family YP_004239678.1 PFAM: protein of unknown function (DUF3592) YP_004239679.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif YP_004239681.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region YP_004239683.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3 YP_004239684.1 PFAM: Major Facilitator Superfamily YP_004239685.1 PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: glucarate dehydratase YP_004239686.1 PFAM: aldehyde dehydrogenase family YP_004239687.1 PFAM: dihydrodipicolinate synthetase family; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase YP_004239688.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_004239689.1 PFAM: tripartite tricarboxylate transporter family receptor YP_004239691.1 PFAM: tripartite tricarboxylate transporter TctA family YP_004239692.1 PFAM: Universal stress protein family YP_004239694.1 PFAM: NUDIX domain YP_004239696.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_004239698.1 TIGRFAM: phosphate ABC transporter phosphate-binding protein YP_004239699.1 PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: phosphate ABC transporter permease PstC YP_004239700.1 PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: phosphate ABC transporter permease PstA YP_004239701.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter ATP-binding protein YP_004239704.1 PFAM: phosphate transporter family YP_004239707.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004239709.1 PFAM: Sortase family YP_004239710.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004239711.1 PFAM: anti-sigma-K factor rskA YP_004239713.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase YP_004239714.1 PFAM: class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_004239715.1 PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain YP_004239716.1 PFAM: ANTAR domain YP_004239717.1 PFAM: alpha-L-arabinofuranosidase C-terminus YP_004239718.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: uncharacterized HhH-GPD family protein YP_004239719.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004239720.1 PFAM: Isochorismatase family YP_004239721.1 PFAM: Urease, subunit gamma; TIGRFAM: urease, gamma subunit YP_004239722.1 PFAM: Urease subunit beta; TIGRFAM: urease subunit beta YP_004239723.1 PFAM: Amidohydrolase family; Urease alpha-subunit, N-terminal domain; TIGRFAM: urease, subunit alpha YP_004239724.1 PFAM: UreE urease accessory protein, N-terminal domain; UreE urease accessory protein, C-terminal domain YP_004239725.1 PFAM: UreF YP_004239726.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG YP_004239727.1 PFAM: UreD urease accessory protein YP_004239728.1 PFAM: High-affinity nickel-transporter; TIGRFAM: high-affinity nickel-transporter HoxN/HupN/NixA family YP_004239729.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_004239730.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004239731.1 PFAM: Major Facilitator Superfamily YP_004239732.1 PFAM: short chain dehydrogenase YP_004239733.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004239734.1 PFAM: GAF domain; ANTAR domain YP_004239737.1 PFAM: Bacterial regulatory proteins, tetR family YP_004239738.1 PFAM: EamA-like transporter family YP_004239739.1 PFAM: protein of unknown function, DUF488 YP_004239740.1 PFAM: GAF domain; ANTAR domain YP_004239741.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_004239742.1 PFAM: NmrA-like family YP_004239743.1 PFAM: alpha amylase, C-terminal all-beta domain; alpha amylase, catalytic domain YP_004239744.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme YP_004239745.1 PFAM: methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, unknown substrate-specific YP_004239746.1 PFAM: HNH endonuclease YP_004239748.1 PFAM: transglycosylase YP_004239749.1 PFAM: Aldo/keto reductase family YP_004239751.1 PFAM: NAD dependent epimerase/dehydratase family YP_004239752.1 PFAM: Aldo/keto reductase family YP_004239753.1 PFAM: Aldo/keto reductase family YP_004239754.1 PFAM: Helix-turn-helix YP_004239756.1 PFAM: protein of unknown function (DUF1458) YP_004239757.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004239758.1 PFAM: protein of unknown function, DUF1537 YP_004239759.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_004239760.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter YP_004239761.1 PFAM: fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases YP_004239762.1 PFAM: acyltransferase family YP_004239764.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004239766.1 PFAM: pyridoxal-dependent decarboxylase conserved domain YP_004239768.1 PFAM: Siderophore biosynthesis protein domain YP_004239769.1 PFAM: ferric iron reductase FhuF-like transporter; IucA / IucC family YP_004239770.1 PFAM: short chain dehydrogenase YP_004239772.1 PFAM: Sugar (and other) transporter YP_004239774.1 PFAM: ATP dependent DNA ligase domain; Eukaryotic and archaeal DNA primase small subunit; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain; DNA ligase D; DNA polymerase LigD, polymerase domain; DNA ligase D, 3'-phosphoesterase domain YP_004239775.1 PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic YP_004239776.1 PFAM: methyltransferase domain YP_004239777.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: phosphotransferase System HPr (HPr) Family YP_004239778.1 PFAM: PTS system, Lactose/cellobiose specific IIB subunit; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component; PTS system, fructose subfamily, IIA component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4 YP_004239779.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family YP_004239780.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_004239782.1 PFAM: phospholipase/carboxylesterase YP_004239783.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_004239784.1 PFAM: glycosyl hydrolase family 65, C-terminal domain; glycosyl hydrolase family 65, N-terminal domain; glycosyl hydrolase family 65 central catalytic domain YP_004239785.1 PFAM: Bacterial protein of unknown function (DUF894) YP_004239787.1 PFAM: LamB/YcsF family YP_004239788.1 PFAM: protein of unknown function (DUF445) YP_004239789.1 PFAM: glycerophosphoryl diester phosphodiesterase family YP_004239791.1 PFAM: AzlC protein YP_004239792.1 PFAM: Branched-chain amino acid transporter (AzlD) YP_004239796.1 PFAM: Bacterial regulatory proteins, tetR family YP_004239797.1 PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family YP_004239798.1 PFAM: O-methyltransferase YP_004239799.1 PFAM: Ferritin-like domain YP_004239800.1 PFAM: CsbD-like YP_004239802.1 PFAM: ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_004239803.1 PFAM: protein of unknown function (DUF3618) YP_004239804.1 PFAM: protein of unknown function (DUF1469) YP_004239807.1 PFAM: NAD dependent epimerase/dehydratase family YP_004239808.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily YP_004239809.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain YP_004239810.1 PFAM: glycosyltransferase family 9 (heptosyltransferase) YP_004239811.1 PFAM: glycosyl transferases group 1 YP_004239812.1 PFAM: Starch synthase catalytic domain; glycosyl transferases group 1 YP_004239813.1 PFAM: SIS domain YP_004239814.1 PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain YP_004239815.1 PFAM: short chain dehydrogenase YP_004239816.1 PFAM: aldehyde dehydrogenase family YP_004239817.1 PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain YP_004239819.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_004239820.1 PFAM: Sugar (and other) transporter YP_004239821.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase YP_004239823.1 PFAM: HxlR-like helix-turn-helix YP_004239824.1 PFAM: NmrA-like family YP_004239825.1 PFAM: Amino acid permease YP_004239827.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004239828.1 PFAM: Urocanase; TIGRFAM: urocanate hydratase YP_004239829.1 PFAM: phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase YP_004239832.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004239833.1 PFAM: Universal stress protein family YP_004239834.1 PFAM: tripartite tricarboxylate transporter TctA family YP_004239835.1 PFAM: tripartite tricarboxylate transporter TctB family YP_004239836.1 PFAM: tripartite tricarboxylate transporter family receptor YP_004239837.1 PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold YP_004239838.1 PFAM: HTH domain; Response regulator receiver domain YP_004239839.1 PFAM: arginase family; TIGRFAM: formimidoylglutamase YP_004239840.1 PFAM: Sodium/hydrogen exchanger family YP_004239841.1 PFAM: Permease family YP_004239842.1 PFAM: Copper resistance protein CopC YP_004239843.1 PFAM: FAD binding domain YP_004239844.1 PFAM: Universal stress protein family YP_004239846.1 PFAM: ABC transporter YP_004239848.1 PFAM: NlpC/P60 family YP_004239849.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_004239850.1 PFAM: Domain of unknown function (DUF1025) YP_004239851.1 PFAM: EamA-like transporter family YP_004239852.1 PFAM: DSBA-like thioredoxin domain YP_004239853.1 PFAM: PHP domain YP_004239854.1 PFAM: Levansucrase/Invertase YP_004239855.1 PFAM: protein of unknown function (DUF322) YP_004239856.1 PFAM: Small integral membrane protein (DUF2273) YP_004239860.1 PFAM: alpha amylase, catalytic domain YP_004239861.1 PFAM: Bacterial extracellular solute-binding protein YP_004239862.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239863.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239865.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004239867.1 PFAM: endonuclease/exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_004239868.1 PFAM: aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_004239869.1 PFAM: enoyl-CoA hydratase/isomerase family YP_004239870.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase YP_004239871.1 PFAM: enoyl-CoA hydratase/isomerase family YP_004239872.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004239873.1 PFAM: Cupin domain; Helix-turn-helix YP_004239874.1 PFAM: SNARE associated Golgi protein YP_004239875.1 PFAM: MarR family YP_004239876.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain YP_004239877.1 PFAM: short chain dehydrogenase YP_004239878.1 PFAM: MerR family regulatory protein; TipAS antibiotic-recognition domain YP_004239880.1 PFAM: 'Cold-shock' DNA-binding domain YP_004239881.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004239882.1 PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004239883.1 PFAM: Domain of unknown function (DUF336) YP_004239884.1 PFAM: ankyrin repeat YP_004239885.1 PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain YP_004239886.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase subunit beta YP_004239887.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit alpha YP_004239888.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004239889.1 PFAM: NAD synthase; TIGRFAM: NAD+ synthetase YP_004239890.1 PFAM: phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_004239891.1 PFAM: ANTAR domain YP_004239894.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; phosphoglycolate/pyridoxal phosphate phosphatase family; Haloacid Dehalogenase Superfamily class (subfamily) IIA YP_004239895.1 PFAM: SpoU rRNA methylase family YP_004239896.1 PFAM: fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YP_004239897.1 PFAM: protein of unknown function (DUF3151) YP_004239899.1 PFAM: Zinc carboxypeptidase YP_004239900.1 PFAM: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_004239901.1 PFAM: Domain of unknown function (DUF1508) YP_004239902.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004239905.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_004239906.1 PFAM: protein of unknown function (DUF419) YP_004239907.1 PFAM: Domain of unknown function (DUF1990) YP_004239908.1 PFAM: antibiotic biosynthesis monooxygenase YP_004239909.1 PFAM: protein of unknown function (DUF503) YP_004239911.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II YP_004239912.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I YP_004239913.1 PFAM: phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein YP_004239915.1 PFAM: PA domain; Subtilase family YP_004239918.1 PFAM: Subtilisin inhibitor-like YP_004239919.1 PFAM: MarR family YP_004239922.1 PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_004239923.1 PFAM: ABC transporter YP_004239926.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_004239927.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III subunit gamma and tau YP_004239929.1 PFAM: Integrase core domain YP_004239931.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2236) YP_004239932.1 PFAM: glutathione peroxidase YP_004239933.1 PFAM: Calcineurin-like phosphoesterase YP_004239938.1 PFAM: Bacterial regulatory proteins, tetR family YP_004239939.1 PFAM: DSBA-like thioredoxin domain YP_004239940.1 PFAM: glycosyl transferases group 1 YP_004239941.1 PFAM: Amylo-alpha-1,6-glucosidase YP_004239942.1 PFAM: acetyltransferase (GNAT) family YP_004239943.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_004239944.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain YP_004239945.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004239946.1 PFAM: Xylose isomerase-like TIM barrel YP_004239947.1 PFAM: ROK family YP_004239948.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_004239949.1 PFAM: Major Facilitator Superfamily YP_004239950.1 PFAM: malate synthase; TIGRFAM: malate synthase A YP_004239951.1 PFAM: isocitrate lyase family; TIGRFAM: isocitrate lyase YP_004239952.1 PFAM: Helix-turn-helix; Domain of unknown function (DUF955) YP_004239953.1 TIGRFAM: TRAP transporter solute receptor, TAXI family YP_004239954.1 PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004239955.1 PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal YP_004239956.1 PFAM: Sugar (and other) transporter YP_004239957.1 PFAM: Serpin (serine protease inhibitor) YP_004239958.1 PFAM: phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_004239960.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777 YP_004239961.1 PFAM: Bacterial regulatory proteins, tetR family YP_004239962.1 PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein YP_004239963.1 PFAM: Dienelactone hydrolase family YP_004239964.1 PFAM: queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_004239970.1 PFAM: glycosyl hydrolases family 32 C terminal; glycosyl hydrolases family 32 N-terminal domain YP_004239971.1 PFAM: ABC transporter; TOBE domain YP_004239972.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004239973.1 PFAM: Bacterial extracellular solute-binding protein YP_004239974.1 PFAM: glycosyl hydrolase family 76 YP_004239975.1 PFAM: short chain dehydrogenase YP_004239976.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain YP_004239977.1 PFAM: protein of unknown function (DUF1684) YP_004239980.1 PFAM: phosphoenolpyruvate carboxylase YP_004239981.1 PFAM: transposase YP_004239982.1 PFAM: Integrase core domain YP_004239983.1 PFAM: transposase IS116/IS110/IS902 family YP_004239984.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004239987.1 PFAM: SNARE associated Golgi protein YP_004239988.1 PFAM: Bacterial transcriptional activator domain YP_004239991.1 PFAM: IstB-like ATP binding protein YP_004239993.1 PFAM: Integrase core domain YP_004239997.1 PFAM: RNA pseudouridylate synthase YP_004239998.1 PFAM: Bacterial regulatory protein, arsR family YP_004240000.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain YP_004240001.1 PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase YP_004240002.1 PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase YP_004240005.1 PFAM: Domain of unkown function (DUF1775) YP_004240008.1 PFAM: Natural resistance-associated macrophage protein YP_004240009.1 PFAM: protein of unknown function (DUF1445) YP_004240010.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004240011.1 PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme YP_004240012.1 PFAM: allophanate hydrolase subunit 2; allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370; biotin-dependent carboxylase uncharacterized domain YP_004240013.1 PFAM: LamB/YcsF family YP_004240014.1 PFAM: glutaminase YP_004240015.1 PFAM: glutaminase; TIGRFAM: glutaminase A YP_004240017.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004240018.1 PFAM: Xylose isomerase-like TIM barrel YP_004240019.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain YP_004240020.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004240021.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240022.1 PFAM: Binding-protein-dependent transporter inner membrane component; ABC transporter; oligopeptide/dipeptide transporter C-terminal region YP_004240023.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region YP_004240024.1 PFAM: Xylose isomerase-like TIM barrel YP_004240025.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004240026.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004240027.1 PFAM: glucuronate isomerase YP_004240028.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_004240029.1 PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (glycoside-Pentoside-Hexuronide) transporter YP_004240030.1 PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004240031.1 PFAM: shikimate kinase; glycosyl hydrolase family 3 N terminal domain; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family YP_004240032.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004240033.1 PFAM: family YP_004240034.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004240035.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240036.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240037.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain YP_004240038.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain YP_004240039.1 PFAM: glycosyl hydrolases family 32 C terminal; glycosyl hydrolases family 32 N-terminal domain YP_004240040.1 PFAM: glycosyl hydrolases family 32 C terminal; glycosyl hydrolases family 32 N-terminal domain; Domain of Unknown Function (DUF1080) YP_004240043.1 PFAM: 6-pyruvoyl tetrahydropterin synthase YP_004240044.1 PFAM: glycosyl transferases group 1 YP_004240046.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_004240047.1 PFAM: PAP2 superfamily YP_004240048.1 PFAM: phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_004240049.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004240050.1 PFAM: Domain of unknown function (DUF1905) YP_004240052.1 PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004240053.1 PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal YP_004240054.1 PFAM: transcriptional regulatory protein, C terminal YP_004240055.1 PFAM: phosphoglycerate mutase family YP_004240057.1 PFAM: Bacterial regulatory proteins, tetR family YP_004240058.1 PFAM: ABC transporter; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats; YhgE/Pip C-terminal domain; YhgE/Pip N-terminal domain YP_004240060.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_004240061.1 PFAM: phosphoenolpyruvate carboxykinase YP_004240062.1 PFAM: oxidoreductase FAD-binding domain; Globin; oxidoreductase NAD-binding domain YP_004240063.1 PFAM: transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator) YP_004240065.1 PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_004240066.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family YP_004240067.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily YP_004240068.1 PFAM: Integrase core domain YP_004240069.1 PFAM: acetyltransferase (GNAT) family YP_004240070.1 PFAM: prolyl oligopeptidase, N-terminal beta-propeller domain; prolyl oligopeptidase family YP_004240072.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004240074.1 PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; endonuclease/exonuclease/phosphatase family YP_004240075.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family YP_004240076.1 PFAM: transcriptional regulator PadR-like family; virulence activator alpha C-term YP_004240077.1 PFAM: Domain of Unknown Function (DUF1540) YP_004240078.1 PFAM: carbon starvation protein CstA YP_004240079.1 PFAM: protein of unknown function (DUF466) YP_004240080.1 PFAM: protein of unknown function (DUF2587) YP_004240082.1 PFAM: Aldo/keto reductase family YP_004240086.1 PFAM: glycosyltransferase family 28 C-terminal domain YP_004240088.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004240091.1 PFAM: TAP-like protein YP_004240092.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III delta' subunit YP_004240093.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_004240094.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_004240095.1 PFAM: protein of unknown function (DUF2516) YP_004240097.1 PFAM: phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1 YP_004240098.1 PFAM: PhoU domain; TIGRFAM: phosphate transporter regulatory protein PhoU YP_004240099.1 PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004240100.1 PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal YP_004240102.1 PFAM: CarD-like/TRCF domain YP_004240103.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_004240104.1 PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_004240105.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_004240106.1 PFAM: SpoU rRNA methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3 YP_004240107.1 PFAM: alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX YP_004240108.1 PFAM: ribonuclease YP_004240109.1 PFAM: Barstar (barnase inhibitor) YP_004240110.1 PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_004240111.1 PFAM: carbohydrate phosphorylase; protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases YP_004240112.1 PFAM: alpha amylase, catalytic domain; Domain of unknown function (DUF3416) YP_004240113.1 PFAM: alpha amylase, catalytic domain; TIGRFAM: trehalose synthase YP_004240114.1 PFAM: alpha amylase, C-terminal all-beta domain; alpha amylase, catalytic domain; carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; trehalose synthase-fused probable maltokinase YP_004240116.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase subunit GlcD YP_004240117.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_004240118.1 PFAM: ABC transporter; TOBE domain YP_004240119.1 PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB YP_004240120.1 PFAM: glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming] YP_004240121.1 PFAM: DSBA-like thioredoxin domain YP_004240122.1 PFAM: Rho termination factor, N-terminal domain; ChaB YP_004240123.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_004240124.1 PFAM: Major Facilitator Superfamily YP_004240128.1 PFAM: Amino acid permease YP_004240129.1 PFAM: Ferritin-like domain YP_004240130.1 PFAM: Major Facilitator Superfamily YP_004240131.1 PFAM: Bacterial regulatory proteins, tetR family YP_004240132.1 PFAM: glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating) YP_004240133.1 PFAM: Aminomethyltransferase folate-binding domain; glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: sarcosine oxidase subunit gamma family, heterotetrameric form; glycine cleavage system T protein YP_004240134.1 PFAM: Integrase core domain YP_004240135.1 PFAM: transposase YP_004240136.1 PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form YP_004240137.1 PFAM: TspO/MBR family YP_004240138.1 PFAM: FemAB family YP_004240139.1 PFAM: FemAB family YP_004240140.1 PFAM: protein of unknown function (DUF1212) YP_004240141.1 PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain YP_004240142.1 PFAM: uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_004240143.1 PFAM: protein of unknown function (DUF3263) YP_004240145.1 PFAM: 'Cold-shock' DNA-binding domain YP_004240146.1 PFAM: Receptor family ligand binding region YP_004240147.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_004240148.1 PFAM: Bacterial extracellular solute-binding protein YP_004240149.1 PFAM: RNase H YP_004240150.1 PFAM: proteins of 100 residues with WXG YP_004240151.1 PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004240152.1 PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal YP_004240153.1 PFAM: Domain of unknown function (DUF427) YP_004240154.1 PFAM: Helicase conserved C-terminal domain; type III restriction enzyme, res subunit YP_004240157.1 PFAM: 'Cold-shock' DNA-binding domain YP_004240158.1 PFAM: protein of unknown function (DUF3027) YP_004240159.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_004240160.1 PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_004240161.1 PFAM: peptidase family M23 YP_004240162.1 PFAM: NlpC/P60 family YP_004240163.1 PFAM: NlpC/P60 family YP_004240164.1 PFAM: HNH endonuclease YP_004240167.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_004240168.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_004240169.1 PFAM: glycosyl hydrolases family 38 C-terminal domain; glycosyl hydrolases family 38 N-terminal domain; alpha mannosidase, middle domain YP_004240172.1 PFAM: ABC transporter YP_004240173.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_004240174.1 PFAM: NUDIX domain YP_004240176.1 PFAM: protein of unknown function (DUF998) YP_004240178.1 PFAM: inositol monophosphatase family YP_004240179.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA YP_004240181.1 PFAM: UDP-glucoronosyl and UDP-glucosyl transferase YP_004240183.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase subunit beta YP_004240184.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, subunit alpha YP_004240185.1 PFAM: activator of Hsp90 ATPase homolog 1-like protein YP_004240186.1 PFAM: Bacterial regulatory protein, arsR family YP_004240187.1 PFAM: Tautomerase enzyme YP_004240188.1 PFAM: pfkB family carbohydrate kinase YP_004240190.1 PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_004240191.1 PFAM: aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_004240192.1 PFAM: Xylose isomerase-like TIM barrel YP_004240193.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain YP_004240194.1 PFAM: Xylose isomerase-like TIM barrel YP_004240195.1 PFAM: family YP_004240196.1 PFAM: Branched-chain amino acid transporter / permease YP_004240197.1 PFAM: ABC transporter YP_004240198.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004240199.1 PFAM: Xylose isomerase-like TIM barrel YP_004240200.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain YP_004240201.1 PFAM: MarR family YP_004240202.1 PFAM: Major Facilitator Superfamily YP_004240203.1 PFAM: KduI/IolB family YP_004240204.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_004240206.1 PFAM: Possible lysine decarboxylase YP_004240207.1 PFAM: Matrixin YP_004240209.1 PFAM: Sodium:solute symporter family YP_004240210.1 PFAM: Cupin domain; Helix-turn-helix YP_004240211.1 PFAM: arginase family; TIGRFAM: agmatinase YP_004240212.1 PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_004240213.1 PFAM: MarR family YP_004240214.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily YP_004240215.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_004240216.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_004240217.1 PFAM: thioesterase YP_004240219.1 PFAM: AAA domain (dynein-related subfamily) YP_004240220.1 PFAM: McrBC 5-methylcytosine restriction system component YP_004240221.1 PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004240222.1 PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal YP_004240223.1 PFAM: Hpt domain YP_004240224.1 PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr YP_004240227.1 PFAM: radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase YP_004240230.1 PFAM: PKD domain YP_004240231.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_004240233.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_004240234.1 PFAM: ZIP Zinc transporter YP_004240236.1 PFAM: Uncharacterized conserved protein (COG2071) YP_004240237.1 PFAM: protein of unknown function (DUF1622) YP_004240238.1 PFAM: NAD dependent epimerase/dehydratase family YP_004240241.1 PFAM: transglycosylase-like domain; LysM domain YP_004240242.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_004240243.1 PFAM: adenosine/AMP deaminase; TIGRFAM: adenosine deaminase YP_004240245.1 PFAM: acylphosphatase YP_004240246.1 TIGRFAM: RecB family nuclease, , TM0106 family YP_004240247.1 PFAM: integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family YP_004240248.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family YP_004240249.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit YP_004240251.1 PFAM: alcohol dehydrogenase GroES-like domain; TIGRFAM: formaldehyde dehydrogenase, glutathione-independent YP_004240253.1 PFAM: Major Facilitator Superfamily YP_004240255.1 PFAM: Bacterial regulatory protein, arsR family; activator of Hsp90 ATPase homolog 1-like protein YP_004240256.1 PFAM: Mechanosensitive ion channel YP_004240257.1 PFAM: glycerophosphoryl diester phosphodiesterase family YP_004240258.1 PFAM: Major Facilitator Superfamily YP_004240260.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) YP_004240261.1 PFAM: Sulfite exporter TauE/SafE YP_004240262.1 PFAM: aldehyde dehydrogenase family YP_004240263.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240264.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240265.1 PFAM: Bacterial extracellular solute-binding protein YP_004240266.1 PFAM: DeoC/LacD family aldolase YP_004240267.1 PFAM: pfkB family carbohydrate kinase YP_004240268.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004240269.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_004240270.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_004240271.1 PFAM: Bacterial protein of unknown function (DUF894) YP_004240272.1 PFAM: MarR family YP_004240273.1 PFAM: sporulation protein YtfJ (Spore_YtfJ) YP_004240274.1 PFAM: Domain of unknown function (DU1801) YP_004240275.1 PFAM: Calcineurin-like phosphoesterase YP_004240276.1 PFAM: protein of unknown function (DUF664) YP_004240277.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004240278.1 PFAM: SnoaL-like polyketide cyclase YP_004240279.1 PFAM: protein of unknown function (DUF1304) YP_004240280.1 PFAM: Bacterial regulatory proteins, luxR family YP_004240282.1 PFAM: ABC transporter YP_004240284.1 PFAM: Cation transporter YP_004240285.1 PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain YP_004240286.1 PFAM: SOUL heme-binding protein YP_004240287.1 PFAM: Predicted membrane protein (DUF2177) YP_004240288.1 PFAM: MarR family YP_004240289.1 PFAM: protein of unknown function (DUF1295) YP_004240290.1 PFAM: Cupin domain YP_004240291.1 PFAM: Excalibur calcium-binding domain; Domain of unknown function (DUF1994) YP_004240292.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter YP_004240293.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_004240294.1 PFAM: Major Facilitator Superfamily YP_004240298.1 PFAM: protein of unknown function (DUF1326) YP_004240299.1 PFAM: Predicted metal-binding integral membrane protein (DUF2182) YP_004240300.1 PFAM: isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_004240301.1 PFAM: beta-lactamase YP_004240303.1 PFAM: DNA/RNA tunnel of bacterial DNA dependent RNA polymerase; alpha/beta hydrolase fold YP_004240304.1 PFAM: alpha/beta hydrolase fold YP_004240305.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: phosphotransferase System HPr (HPr) Family YP_004240306.1 PFAM: PTS system sugar-specific permease YP_004240307.1 PFAM: PTS system, Lactose/cellobiose specific IIB subunit YP_004240308.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_004240309.1 PFAM: ROK family YP_004240310.1 PFAM: GYD domain YP_004240311.1 PFAM: DJ-1/PfpI family YP_004240312.1 PFAM: Sugar (and other) transporter YP_004240313.1 PFAM: RibD C-terminal domain YP_004240314.1 PFAM: Bacterial regulatory proteins, tetR family YP_004240315.1 PFAM: Major Facilitator Superfamily YP_004240316.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004240317.1 PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_004240319.1 PFAM: AsnC family YP_004240320.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_004240321.1 PFAM: Amino acid permease YP_004240323.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004240324.1 PFAM: carbon-nitrogen hydrolase YP_004240325.1 PFAM: Amino acid permease YP_004240326.1 PFAM: carbon-nitrogen hydrolase YP_004240331.1 PFAM: IstB-like ATP binding protein YP_004240332.1 PFAM: Integrase core domain YP_004240334.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm) YP_004240336.1 PFAM: KAP family P-loop domain YP_004240337.1 PFAM: acetyltransferase (GNAT) family YP_004240338.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_004240339.1 PFAM: Major Facilitator Superfamily YP_004240340.1 PFAM: inosine-uridine preferring nucleoside hydrolase YP_004240341.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase YP_004240342.1 PFAM: sugar-binding domain YP_004240343.1 PFAM: Bacterial extracellular solute-binding protein YP_004240344.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240345.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240346.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_004240347.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_004240349.1 PFAM: Bacterial regulatory proteins, gntR family YP_004240353.1 PFAM: Flavin-binding monooxygenase-like YP_004240354.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004240355.1 PFAM: HNH endonuclease YP_004240357.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004240358.1 PFAM: antibiotic biosynthesis monooxygenase YP_004240359.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004240360.1 PFAM: Domain of unknown function DUF59 YP_004240361.1 PFAM: Amidohydrolase YP_004240362.1 PFAM: Bacterial regulatory protein, Fis family YP_004240363.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II YP_004240364.1 PFAM: Flavin reductase like domain YP_004240365.1 PFAM: Dicarboxylate carrier protein MatC N-terminus; TC 9.B.48 YP_004240366.1 PFAM: Asp/Glu/Hydantoin racemase YP_004240367.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004240368.1 PFAM: Major Facilitator Superfamily YP_004240369.1 PFAM: amidase YP_004240370.1 PFAM: YCII-related domain YP_004240371.1 PFAM: Bacterial regulatory proteins, gntR family YP_004240373.1 PFAM: HNH endonuclease YP_004240375.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004240377.1 PFAM: Branched-chain amino acid transporter / permease YP_004240378.1 PFAM: ABC transporter YP_004240380.1 PFAM: alpha/beta hydrolase fold YP_004240381.1 PFAM: family YP_004240383.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004240384.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004240387.1 PFAM: ABC transporter YP_004240388.1 PFAM: Branched-chain amino acid transporter / permease YP_004240389.1 PFAM: Xylose isomerase-like TIM barrel YP_004240390.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain YP_004240391.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_004240394.1 PFAM: alpha/beta hydrolase fold YP_004240395.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_004240396.1 PFAM: protein of unknown function, DUF1537; pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_004240397.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004240398.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240399.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240400.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region YP_004240401.1 PFAM: ABC transporter YP_004240402.1 PFAM: Aldo/keto reductase family YP_004240403.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_004240404.1 PFAM: BNR/Asp-box repeat YP_004240405.1 PFAM: short chain dehydrogenase YP_004240406.1 PFAM: LysM domain YP_004240408.1 PFAM: hemerythrin HHE cation binding domain YP_004240409.1 PFAM: Subtilase family YP_004240411.1 PFAM: gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_004240413.1 PFAM: Nuclease-related domain YP_004240415.1 PFAM: 'Cold-shock' DNA-binding domain YP_004240416.1 PFAM: Lipase (class 2) YP_004240417.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004240418.1 PFAM: shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family YP_004240419.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter YP_004240420.1 PFAM: PhoD-like phosphatase YP_004240421.1 PFAM: TfoX N-terminal domain YP_004240422.1 PFAM: short chain dehydrogenase YP_004240423.1 PFAM: FMN-binding domain YP_004240424.1 PFAM: EamA-like transporter family YP_004240425.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_004240426.1 PFAM: Amino acid permease YP_004240427.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004240428.1 PFAM: Bacterial transcriptional regulator YP_004240429.1 PFAM: cyclase YP_004240431.1 PFAM: Homocysteine S-methyltransferase YP_004240432.1 PFAM: RibD C-terminal domain YP_004240434.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_004240435.1 PFAM: transglycosylase YP_004240436.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_004240437.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_004240438.1 PFAM: glycosyl transferases group 1 YP_004240439.1 PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain YP_004240443.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_004240445.1 PFAM: Sugar (and other) transporter YP_004240446.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004240448.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type YP_004240449.1 PFAM: catalase; catalase-related immune-responsive YP_004240451.1 PFAM: protein kinase domain YP_004240454.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain YP_004240456.1 PFAM: Branched-chain amino acid transporter / permease YP_004240457.1 PFAM: ABC transporter YP_004240458.1 PFAM: ROK family YP_004240459.1 PFAM: carbon-nitrogen hydrolase YP_004240460.1 PFAM: Purine catabolism regulatory protein-like family YP_004240461.1 PFAM: Amino acid permease; TIGRFAM: amino acid transporter; TC 2.A.3 YP_004240462.1 PFAM: Flavin containing amine oxidoreductase YP_004240464.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_004240465.1 PFAM: serine hydroxymethyltransferase YP_004240466.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004240467.1 PFAM: ABC transporter; TIGRFAM: ATP-binding ABC transporter family nodulation protein NodI YP_004240468.1 PFAM: ABC transporter YP_004240469.1 PFAM: ABC transporter; TIGRFAM: ABC-2 type transporter NodJ family YP_004240471.1 PFAM: endonuclease/exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_004240472.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_004240473.1 PFAM: 2',5' RNA ligase family YP_004240474.1 PFAM: ribonuclease BN-like family; TIGRFAM: ribonuclease YP_004240475.1 PFAM: prolyl oligopeptidase family YP_004240476.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004240477.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup YP_004240478.1 PFAM: succinate dehydrogenase/fumarate reductase transmembrane subunit YP_004240479.1 PFAM: succinate dehydrogenase/fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_004240480.1 PFAM: nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_004240481.1 PFAM: peptidase family M20/M25/M40; TIGRFAM: amidohydrolase YP_004240482.1 PFAM: MarR family YP_004240483.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily YP_004240484.1 PFAM: Zinc-binding dehydrogenase YP_004240485.1 PFAM: Basic membrane protein YP_004240486.1 PFAM: ABC transporter YP_004240487.1 PFAM: Branched-chain amino acid transporter / permease YP_004240488.1 PFAM: Branched-chain amino acid transporter / permease YP_004240489.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_004240490.1 PFAM: SNARE associated Golgi protein YP_004240491.1 PFAM: SNARE associated Golgi protein YP_004240492.1 PFAM: adenosine/AMP deaminase; TIGRFAM: adenosine deaminase YP_004240493.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_004240494.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_004240495.1 PFAM: septum formation initiator YP_004240496.1 PFAM: protein of unknown function (DUF501) YP_004240497.1 PFAM: Ppx/GppA phosphatase family YP_004240498.1 PFAM: Subtilase family YP_004240499.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004240500.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2241); acetyltransferase (GNAT) family YP_004240501.1 PFAM: Receptor family ligand binding region YP_004240502.1 PFAM: ABC transporter YP_004240503.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_004240504.1 PFAM: Branched-chain amino acid transporter / permease YP_004240505.1 PFAM: Branched-chain amino acid transporter / permease YP_004240507.1 PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase YP_004240508.1 PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1 YP_004240509.1 PFAM: aldose 1-epimerase YP_004240510.1 PFAM: Domain of unknown function DUF20 YP_004240511.1 PFAM: ACT domain; pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form YP_004240512.1 PFAM: Rhomboid family YP_004240513.1 PFAM: domain; transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_004240515.1 PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: mycothiol conjugate amidase Mca YP_004240517.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_004240518.1 PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_004240519.1 PFAM: PhoH-like protein YP_004240520.1 PFAM: acetyltransferase (GNAT) family YP_004240522.1 PFAM: type IV leader peptidase family YP_004240523.1 PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II YP_004240524.1 PFAM: carbonic anhydrase YP_004240526.1 PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II YP_004240527.1 PFAM: FemAB family YP_004240528.1 PFAM: phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_004240529.1 PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_004240530.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_004240531.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_004240532.1 PFAM: GtrA-like protein YP_004240533.1 TIGRFAM: conserved hypothetical protein TIGR03089 YP_004240534.1 PFAM: transcription factor WhiB YP_004240536.1 PFAM: Domain of unknown function (DUF1025) YP_004240537.1 PFAM: protein of unknown function (DUF3499) YP_004240539.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_004240540.1 PFAM: L,D-transpeptidase catalytic domain YP_004240541.1 PFAM: RDD family YP_004240542.1 PFAM: integral membrane protein DUF95 YP_004240543.1 PFAM: protein of unknown function (DUF1461); TIGRFAM: integral membrane protein TIGR01906 YP_004240544.1 PFAM: AMP-binding enzyme YP_004240545.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_004240546.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_004240547.1 PFAM: aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_004240548.1 PFAM: transglutaminase-like superfamily YP_004240549.1 PFAM: protein of unknown function DUF58 YP_004240550.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_004240551.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_004240552.1 PFAM: transglycosylase-like domain; Domain of unknown function (DUF348); G5 domain YP_004240553.1 PFAM: ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_004240554.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_004240555.1 PFAM: ABC transporter YP_004240556.1 PFAM: Bacterial regulatory proteins, tetR family YP_004240557.1 PFAM: nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_004240558.1 PFAM: phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_004240559.1 PFAM: ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_004240560.1 PFAM: peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_004240561.1 PFAM: Bacterial regulatory proteins, luxR family YP_004240562.1 PFAM: Bacterial regulatory proteins, luxR family YP_004240563.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily YP_004240564.1 PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family YP_004240566.1 PFAM: protein of unknown function (DUF2505) YP_004240567.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_004240568.1 PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457) YP_004240570.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_004240571.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004240572.1 PFAM: transcriptional regulatory protein, C terminal; uroporphyrinogen-III synthase HemD YP_004240573.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: uroporphyrin-III C-methyltransferase YP_004240574.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; nitrite and sulphite reductase 4Fe-4S domain; nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit YP_004240575.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_004240576.1 PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_004240577.1 PFAM: phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleotide phosphorylase YP_004240578.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_004240579.1 PFAM: Prolipoprotein diacylglyceryl transferase YP_004240582.1 PFAM: radical SAM superfamily YP_004240584.1 PFAM: PspC domain YP_004240587.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain YP_004240588.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_004240589.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator) YP_004240590.1 PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter YP_004240591.1 PFAM: glutamine amidotransferase class-I YP_004240593.1 PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme YP_004240594.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_004240595.1 PFAM: MMPL family YP_004240596.1 PFAM: Bacterial regulatory proteins, tetR family YP_004240598.1 PFAM: Sodium:dicarboxylate symporter family YP_004240599.1 PFAM: Bacterial protein of unknown function (DUF885) YP_004240601.1 PFAM: carboxyl transferase domain YP_004240602.1 PFAM: short chain dehydrogenase YP_004240603.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_004240604.1 PFAM: Bacterial membrane flanked domain YP_004240605.1 PFAM: adenylate and Guanylate cyclase catalytic domain YP_004240606.1 PFAM: Fibronectin type III domain YP_004240607.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_004240608.1 PFAM: protein of unknown function DUF58 YP_004240609.1 PFAM: transglutaminase-like superfamily YP_004240610.1 PFAM: RDD family YP_004240611.1 PFAM: protein phosphatase 2C YP_004240613.1 PFAM: protein kinase domain YP_004240615.1 PFAM: FtsK/SpoIIIE family; FHA domain YP_004240617.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_004240618.1 PFAM: inositol monophosphatase family YP_004240619.1 PFAM: acetyltransferase (GNAT) family YP_004240620.1 PFAM: endoribonuclease L-PSP YP_004240621.1 PFAM: Sugar-specific transcriptional regulator TrmB; Response regulator receiver domain YP_004240622.1 PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004240623.1 PFAM: citrate transporter; TIGRFAM: citrate transporter CitMHS family YP_004240624.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C YP_004240625.1 PFAM: amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, subunit alpha YP_004240626.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit beta YP_004240628.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004240629.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase YP_004240630.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase YP_004240631.1 PFAM: FAD dependent oxidoreductase YP_004240632.1 TIGRFAM: imidazolonepropionase YP_004240633.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_004240634.1 PFAM: CAAX amino terminal protease family YP_004240637.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_004240638.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase YP_004240639.1 PFAM: Sugar (and other) transporter; Major Facilitator Superfamily YP_004240640.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004240641.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004240642.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase YP_004240643.1 PFAM: aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_004240645.1 PFAM: GDSL-like Lipase/acylhydrolase YP_004240646.1 PFAM: phospholipase/carboxylesterase YP_004240648.1 PFAM: protein of unknown function, DUF606 YP_004240649.1 PFAM: anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type YP_004240651.1 PFAM: alpha/beta hydrolase fold YP_004240652.1 PFAM: YibE/F-like protein YP_004240653.1 PFAM: dihydrouridine synthase (Dus); TIGRFAM: hypothetical protein YP_004240654.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, ; uncharacterized domain HDIG YP_004240655.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_004240658.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter Bcr/CflA subfamily YP_004240659.1 PFAM: protein of unknown function (DUF1469) YP_004240660.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_004240661.1 PFAM: protein of unknown function (DUF803) YP_004240662.1 PFAM: glycosyl transferases group 1 YP_004240663.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain YP_004240664.1 PFAM: peptidase family M23 YP_004240665.1 PFAM: ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_004240666.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_004240667.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_004240668.1 PFAM: ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_004240669.1 PFAM: Cytidylyltransferase family YP_004240670.1 TIGRFAM: DivIVA domain; DivIVA domain repeat protein YP_004240672.1 PFAM: Sodium:solute symporter family YP_004240673.1 PFAM: protein of unknown function, DUF485 YP_004240674.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004240675.1 PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004240676.1 PFAM: protein of unknown function, DUF485 YP_004240677.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter SSS family YP_004240679.1 PFAM: AsnC family YP_004240680.1 PFAM: dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, subunit alpha YP_004240681.1 PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain YP_004240682.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_004240683.1 PFAM: Bacterial regulatory proteins, tetR family YP_004240684.1 PFAM: carboxyl transferase domain YP_004240685.1 PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme YP_004240686.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain YP_004240687.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit alpha YP_004240688.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase subunit beta YP_004240689.1 PFAM: MaoC like domain YP_004240690.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_004240691.1 PFAM: protein of unknown function (DUF1222) YP_004240692.1 PFAM: Sulfite exporter TauE/SafE YP_004240693.1 PFAM: FAD dependent oxidoreductase YP_004240694.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004240695.1 PFAM: peptidase family M50; TIGRFAM: RIP metalloprotease RseP YP_004240698.1 PFAM: YCII-related domain YP_004240699.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_004240700.1 PFAM: acetyltransferase (GNAT) family YP_004240701.1 PFAM: Bacterial regulatory proteins, tetR family YP_004240702.1 PFAM: ABC transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_004240703.1 PFAM: ABC transporter YP_004240704.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_004240705.1 PFAM: Sulfite exporter TauE/SafE YP_004240706.1 PFAM: pyridoxal-dependent decarboxylase conserved domain YP_004240707.1 PFAM: Aminoglycoside/hydroxyurea antibiotic resistance kinase YP_004240708.1 PFAM: VIT family YP_004240710.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_004240711.1 PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA YP_004240712.1 PFAM: protein of unknown function (DUF448) YP_004240713.1 PFAM: Elongation factor Tu domain 2; translation-initiation factor 2; translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_004240714.1 PFAM: ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_004240716.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_004240717.1 PFAM: thioredoxin; TIGRFAM: thioredoxin YP_004240718.1 PFAM: Aminotransferase class I and II YP_004240719.1 PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_004240722.1 PFAM: integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family YP_004240724.1 PFAM: riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_004240725.1 PFAM: tryptophan 2,3-dioxygenase; TIGRFAM: tryptophan 2,3-dioxygenase YP_004240726.1 PFAM: Aminotransferase class-V; TIGRFAM: kynureninase YP_004240727.1 PFAM: ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_004240728.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; guanosine pentaphosphate synthetase I/polynucleotide phosphorylase YP_004240729.1 PFAM: peptidase M16 inactive domain; Insulinase (peptidase family M16) YP_004240731.1 PFAM: HNH endonuclease YP_004240732.1 PFAM: ThiS family YP_004240733.1 PFAM: Molybdenum Cofactor Synthesis C; radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_004240734.1 PFAM: Mo-co oxidoreductase dimerisation domain; oxidoreductase molybdopterin binding domain YP_004240735.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_004240736.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_004240737.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_004240738.1 PFAM: MoaE protein YP_004240739.1 PFAM: dihydrodipicolinate reductase, N-terminus; dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_004240741.1 PFAM: protein of unknown function (DUF1624) YP_004240743.1 PFAM: dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_004240744.1 PFAM: metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_004240745.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_004240746.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_004240747.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_004240748.1 PFAM: Helix-turn-helix YP_004240749.1 PFAM: MarR family YP_004240750.1 PFAM: protein of unknown function (DUF3046) YP_004240751.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_004240752.1 PFAM: RecX family YP_004240753.1 PFAM: radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family YP_004240754.1 PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA) YP_004240755.1 PFAM: diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_004240756.1 PFAM: methyltransferase small domain YP_004240757.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain YP_004240758.1 PFAM: DEAD_2; DEAD/DEAH box helicase YP_004240759.1 PFAM: LexA DNA binding domain; peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_004240760.1 PFAM: LysM domain YP_004240761.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_004240762.1 PFAM: imidazoleglycerol-phosphate dehydratase YP_004240763.1 PFAM: glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_004240765.1 PFAM: histidine biosynthesis protein; TIGRFAM: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_004240767.1 PFAM: Major Facilitator Superfamily YP_004240769.1 PFAM: translation initiation factor IF-3, C-terminal domain; translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_004240770.1 PFAM: ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_004240771.1 PFAM: ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_004240772.1 PFAM: SpoU rRNA methylase family; RNA 2'-O ribose methyltransferase substrate binding YP_004240773.1 PFAM: transglycosylase YP_004240774.1 PFAM: Major Facilitator Superfamily YP_004240775.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_004240776.1 PFAM: radical SAM superfamily YP_004240778.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha YP_004240779.1 PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; TIGRFAM: phenylalanyl-tRNA synthetase, subunit beta, non-spirochete bacterial YP_004240780.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004240781.1 PFAM: semialdehyde dehydrogenase, dimerisation domain; semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_004240782.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_004240783.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_004240784.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases YP_004240785.1 PFAM: aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_004240786.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor YP_004240787.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_004240788.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_004240789.1 PFAM: pyridoxamine 5'-phosphate oxidase; pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YP_004240790.1 PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_004240791.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_004240792.1 PFAM: metal binding domain of Ada; AlkA N-terminal domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_004240793.1 PFAM: methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg) YP_004240795.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_004240797.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004240799.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily class (subfamily) IIA YP_004240801.1 PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein YP_004240802.1 PFAM: ATP-NAD kinase YP_004240803.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_004240804.1 PFAM: glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_004240805.1 PFAM: NUDIX domain YP_004240806.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_004240807.1 PFAM: NUDIX domain YP_004240808.1 PFAM: citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II YP_004240809.1 PFAM: isocitrate lyase family; TIGRFAM: methylisocitrate lyase YP_004240810.1 PFAM: MmgE/PrpD family YP_004240811.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004240812.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme YP_004240813.1 PFAM: HTH domain; Response regulator receiver domain YP_004240814.1 PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box YP_004240815.1 PFAM: Sodium:dicarboxylate symporter family YP_004240816.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004240817.1 PFAM: ScpA/B protein YP_004240818.1 PFAM: transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_004240819.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_004240820.1 PFAM: prephenate dehydrogenase YP_004240821.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_004240822.1 PFAM: acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_004240823.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_004240824.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_004240825.1 PFAM: glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_004240826.1 PFAM: FHA domain YP_004240827.1 PFAM: MerR family regulatory protein YP_004240828.1 PFAM: Uncharacterised ACR, COG1259 YP_004240830.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004240831.1 PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; HMGL-like; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: pyruvate carboxylase YP_004240832.1 PFAM: AMP-binding enzyme YP_004240833.1 PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase) YP_004240837.1 PFAM: acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_004240838.1 PFAM: class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II YP_004240839.1 PFAM: protein kinase domain; PASTA domain YP_004240840.1 PFAM: transglycosylase SLT domain; LysM domain YP_004240842.1 PFAM: polyprenyl synthetase YP_004240844.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_004240845.1 PFAM: protein of unknown function (DUF3040) YP_004240846.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_004240847.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_004240849.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding protein dimerisation domain YP_004240850.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_004240851.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_004240852.1 PFAM: glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_004240853.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004240854.1 PFAM: cell cycle protein; TIGRFAM: cell division protein FtsW YP_004240855.1 PFAM: glycosyltransferase family 28 N-terminal domain; glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_004240856.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--alanine ligase YP_004240857.1 PFAM: cell division protein FtsQ; POTRA domain, FtsQ-type YP_004240858.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_004240859.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_004240860.1 PFAM: alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_004240861.1 PFAM: protein of unknown function (DUF552) YP_004240862.1 PFAM: YGGT family YP_004240863.1 PFAM: DivIVA protein; TIGRFAM: DivIVA domain YP_004240864.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_004240865.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_004240866.1 PFAM: Bacterial DNA polymerase III subunit alpha; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_004240867.1 PFAM: Flavin reductase like domain YP_004240869.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_004240870.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_004240871.1 PFAM: ROK family YP_004240872.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_004240874.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004240875.1 PFAM: glutamine synthetase, catalytic domain; glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase YP_004240876.1 PFAM: GlnD PII-uridylyltransferase; glutamate-ammonia ligase adenylyltransferase YP_004240877.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004240879.1 PFAM: glutamine synthetase, catalytic domain; glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase YP_004240880.1 PFAM: RDD family YP_004240883.1 PFAM: radical SAM superfamily; TIGRFAM: lipoate synthase YP_004240884.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_004240885.1 PFAM: protein kinase domain YP_004240886.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777 YP_004240887.1 PFAM: WD40-like beta Propeller Repeat; peptidase family S41 YP_004240888.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily YP_004240890.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase YP_004240891.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_004240892.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain YP_004240893.1 PFAM: PAC2 family YP_004240894.1 PFAM: Major Facilitator Superfamily YP_004240896.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_004240898.1 PFAM: Toprim domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase subunit beta, carboxyl terminus YP_004240899.1 PFAM: peptidase family M48 YP_004240900.1 PFAM: Penicillinase repressor YP_004240901.1 PFAM: Bacterial cytochrome Ubiquinol Oxidase YP_004240902.1 PFAM: cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase subunit II (cydB) YP_004240903.1 PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: thiol reductant ABC exporter, CydD subunit; thiol reductant ABC exporter, CydC subunit YP_004240905.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller YP_004240906.1 PFAM: CoA binding domain; acetyltransferase (GNAT) family YP_004240908.1 PFAM: type I phosphodiesterase / nucleotide pyrophosphatase YP_004240909.1 PFAM: thymidine kinase YP_004240910.1 PFAM: protein of unknown function (DUF3071) YP_004240912.1 PFAM: protein of unknown function (DUF3093) YP_004240913.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_004240914.1 PFAM: protein of unknown function (DUF3710) YP_004240916.1 PFAM: protein of unknown function (DUF3159) YP_004240917.1 PFAM: TrkA-N domain; TrkA-C domain YP_004240918.1 PFAM: TrkA-N domain YP_004240919.1 TC 2.A.3 YP_004240920.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); tRNA (uracil-5-)-methyltransferase YP_004240921.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1 YP_004240922.1 PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_004240923.1 PFAM: protein of unknown function (DUF402) YP_004240925.1 PFAM: Aldo/keto reductase family YP_004240926.1 PFAM: inosine-uridine preferring nucleoside hydrolase YP_004240928.1 PFAM: Cobalt transporter YP_004240929.1 PFAM: ABC transporter YP_004240930.1 PFAM: enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_004240931.1 PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_004240932.1 PFAM: 3'-5' exonuclease; HRDC domain YP_004240933.1 PFAM: protein of unknown function (DUF3000) YP_004240934.1 PFAM: beta-eliminating lyase YP_004240935.1 PFAM: short chain dehydrogenase YP_004240937.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_004240939.1 PFAM: prolyl oligopeptidase family YP_004240940.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_004240941.1 PFAM: Fe-S metabolism associated domain YP_004240942.1 PFAM: Rhodanese-like domain YP_004240943.1 PFAM: AFG1-like ATPase YP_004240946.1 PFAM: polypeptide deformylase; TIGRFAM: peptide deformylase YP_004240947.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_004240948.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_004240949.1 PFAM: ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_004240950.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD YP_004240951.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, subunit alpha YP_004240952.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004240953.1 PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II YP_004240954.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_004240955.1 PFAM: phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_004240956.1 PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase YP_004240957.1 PFAM: histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_004240958.1 PFAM: phosphoribosyl-AMP cyclohydrolase YP_004240959.1 PFAM: anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_004240960.1 PFAM: tryptophan-associated transmembrane protein (Trp_oprn_chp); TIGRFAM: trp region conserved hypothetical membrane protein YP_004240962.1 PFAM: indole-3-glycerol phosphate synthase YP_004240963.1 PFAM: pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase subunit beta YP_004240964.1 PFAM: tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, subunit alpha YP_004240965.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_004240966.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; glutamate synthase central domain; glutamine amidotransferases class-II YP_004240967.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit YP_004240968.1 PFAM: pyruvate kinase, barrel domain; pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_004240969.1 PFAM: Response regulator receiver domain; ANTAR domain YP_004240970.1 PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004240971.1 PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal YP_004240973.1 PFAM: VTC domain YP_004240975.1 PFAM: carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_004240976.1 PFAM: protein of unknown function (DUF3500) YP_004240977.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004240978.1 PFAM: FAD binding domain YP_004240979.1 PFAM: Sugar (and other) transporter YP_004240980.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004240981.1 PFAM: glycosyl hydrolase family 1 YP_004240982.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004240983.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004240984.1 PFAM: ABC transporter; Binding-protein-dependent transporter inner membrane component; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain YP_004240985.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain YP_004240986.1 PFAM: metallo-beta-lactamase superfamily YP_004240987.1 PFAM: Bacterial alpha-L-rhamnosidase; alpha-L-rhamnosidase N-terminal domain YP_004240988.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004240989.1 PFAM: Bacterial alpha-L-rhamnosidase; alpha-L-rhamnosidase N-terminal domain YP_004240990.1 PFAM: alpha/beta hydrolase fold YP_004240991.1 PFAM: alpha/beta hydrolase fold YP_004240992.1 PFAM: alpha/beta hydrolase fold YP_004240993.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004240994.1 PFAM: Cupin domain YP_004240996.1 PFAM: Aminotransferase class I and II YP_004240997.1 PFAM: Demethylmenaquinone methyltransferase YP_004241000.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004241001.1 PFAM: Bacterial extracellular solute-binding protein YP_004241002.1 PFAM: ABC transporter; TOBE domain YP_004241003.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241004.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241005.1 PFAM: LamB/YcsF family YP_004241006.1 PFAM: allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370 YP_004241007.1 PFAM: allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain YP_004241008.1 PFAM: Sugar (and other) transporter YP_004241009.1 PFAM: short chain dehydrogenase YP_004241010.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_004241011.1 PFAM: short chain dehydrogenase YP_004241012.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_004241013.1 PFAM: shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family YP_004241018.1 TIGRFAM: uncharacterized peroxidase-related enzyme YP_004241019.1 PFAM: alpha/beta hydrolase family of unknown function (DUF1234) YP_004241024.1 PFAM: Bacterial regulatory proteins, tetR family YP_004241025.1 PFAM: acetyltransferase (GNAT) family YP_004241026.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain YP_004241027.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase, Arthrobacter type YP_004241028.1 PFAM: NAD dependent epimerase/dehydratase family YP_004241030.1 PFAM: Berberine and berberine like; FAD binding domain YP_004241031.1 PFAM: DNA/RNA non-specific endonuclease; peptidase S7, Flavivirus NS3 serine protease YP_004241032.1 PFAM: Subtilase family YP_004241033.1 PFAM: SMP-30/gluconolaconase/LRE-like region YP_004241034.1 PFAM: Aldo/keto reductase family YP_004241035.1 PFAM: RibD C-terminal domain YP_004241036.1 PFAM: RibD C-terminal domain YP_004241037.1 PFAM: Formiminotransferase-cyclodeaminase YP_004241038.1 PFAM: alpha/beta hydrolase fold YP_004241040.1 PFAM: glycosyl transferase family 2 YP_004241042.1 PFAM: phosphatidylinositol 3- and 4-kinase; TIGRFAM: conserved hypothetical protein YP_004241043.1 PFAM: phosphoglycerate mutase family; TIGRFAM: probable phosphomutase, MSMEG_4193 family YP_004241044.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004241045.1 PFAM: cytochrome P450 YP_004241046.1 PFAM: pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_004241047.1 PFAM: PEP-utilising enzyme, mobile domain YP_004241048.1 PFAM: short chain dehydrogenase YP_004241049.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_004241050.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004241051.1 PFAM: HD domain YP_004241052.1 PFAM: aldehyde dehydrogenase family YP_004241053.1 PFAM: Sigma-54 interaction domain YP_004241055.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain YP_004241056.1 PFAM: CBS domain YP_004241059.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB YP_004241061.1 PFAM: Dienelactone hydrolase family YP_004241062.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain YP_004241063.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_004241064.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_004241066.1 PFAM: phosphate transporter family YP_004241068.1 PFAM: RibD C-terminal domain YP_004241069.1 PFAM: thioesterase; TIGRFAM: uncharacterized domain 1 YP_004241070.1 PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I YP_004241071.1 PFAM: Amino acid permease YP_004241073.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_004241074.1 PFAM: acetyltransferase (GNAT) family YP_004241075.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family YP_004241077.1 PFAM: Dephospho-CoA kinase; Uncharacterised protein family (UPF0157); TIGRFAM: dephospho-CoA kinase YP_004241078.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC subunit B YP_004241079.1 PFAM: integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family YP_004241080.1 PFAM: Major Facilitator Superfamily YP_004241081.1 PFAM: alpha/beta hydrolase fold YP_004241082.1 PFAM: acetyltransferase (GNAT) family YP_004241083.1 PFAM: Domain of unknown function (DUF3516); Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_004241084.1 PFAM: methyltransferase domain YP_004241085.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_004241086.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_004241087.1 PFAM: Bacterial regulatory proteins, gntR family YP_004241088.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_004241089.1 PFAM: haloacid dehalogenase-like hydrolase YP_004241090.1 PFAM: acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_004241091.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_004241092.1 PFAM: P-loop ATPase protein family YP_004241093.1 PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related YP_004241094.1 PFAM: sporulation Regulator WhiA N terminal; sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein YP_004241095.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_004241096.1 PFAM: glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase YP_004241097.1 PFAM: phosphoglycerate kinase YP_004241098.1 PFAM: triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_004241099.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_004241101.1 TIGRFAM: 6-phosphogluconolactonase YP_004241102.1 PFAM: glucose-6-phosphate dehydrogenase subunit; TIGRFAM: opcA protein YP_004241103.1 PFAM: glucose-6-phosphate dehydrogenase, C-terminal domain; glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_004241104.1 PFAM: phosphoglucose isomerase YP_004241105.1 PFAM: transaldolase; TIGRFAM: transaldolase, mycobacterial type YP_004241106.1 PFAM: transketolase, thiamine diphosphate binding domain; transketolase, C-terminal domain; transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_004241107.1 PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase YP_004241108.1 PFAM: cytochrome oxidase assembly protein YP_004241109.1 PFAM: ABC transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_004241110.1 PFAM: ABC transporter YP_004241111.1 PFAM: Bacterial regulatory protein, arsR family YP_004241112.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB YP_004241113.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1 YP_004241114.1 PFAM: Rieske [2Fe-2S] domain YP_004241115.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_004241116.1 PFAM: Domain of unknown function DUF59 YP_004241117.1 PFAM: neutral zinc metallopeptidase YP_004241118.1 PFAM: AMP-binding enzyme YP_004241119.1 PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_004241120.1 PFAM: Cobalt transporter YP_004241121.1 PFAM: ABC transporter YP_004241122.1 PFAM: BioY family YP_004241123.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004241124.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004241129.1 PFAM: LD-carboxypeptidase YP_004241131.1 PFAM: ABC transporter YP_004241132.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain YP_004241133.1 PFAM: SURF1 family YP_004241135.1 PFAM: protein of unknown function (DUF3099) YP_004241136.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_004241137.1 PFAM: short chain dehydrogenase YP_004241138.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB YP_004241140.1 PFAM: ABC transporter YP_004241141.1 PFAM: Sulfite exporter TauE/SafE YP_004241142.1 PFAM: SpoU rRNA methylase family YP_004241143.1 PFAM: ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_004241144.1 PFAM: Biotin/lipoate A/B protein ligase family YP_004241145.1 PFAM: peptidase family M1; Domain of unknown function (DUF3358); TIGRFAM: aminopeptidase N, Streptomyces lividans type YP_004241146.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_004241147.1 PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407) YP_004241148.1 PFAM: Bacterial domain of unknown function (DUF403) YP_004241149.1 PFAM: transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region YP_004241150.1 PFAM: pyridoxamine 5'-phosphate oxidase YP_004241151.1 PFAM: short chain dehydrogenase YP_004241152.1 PFAM: nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase YP_004241153.1 PFAM: glycosyl transferases group 1; TIGRFAM: glycogen synthase, Corynebacterium family YP_004241154.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA oxidase; acyl-CoA dehydrogenase, middle domain YP_004241155.1 PFAM: Bacterial regulatory proteins, tetR family YP_004241156.1 PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_004241157.1 PFAM: short chain dehydrogenase YP_004241158.1 PFAM: MaoC like domain YP_004241159.1 PFAM: Bacterial protein of unknown function (DUF939) YP_004241160.1 PFAM: beta-lactamase YP_004241161.1 PFAM: glutathione S-transferase, C-terminal domain YP_004241164.1 PFAM: glycosyltransferase family 9 (heptosyltransferase) YP_004241165.1 PFAM: glycosyltransferase family 9 (heptosyltransferase) YP_004241168.1 PFAM: Domain of unknown function (DUF1994) YP_004241170.1 PFAM: protein of unknown function (DUF805) YP_004241171.1 PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain YP_004241174.1 PFAM: protein of unknown function (DUF808); integral membrane protein TerC family YP_004241175.1 PFAM: Integrase core domain YP_004241176.1 PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain YP_004241177.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, N-terminal domain YP_004241180.1 PFAM: Aldo/keto reductase family YP_004241181.1 PFAM: bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_004241182.1 PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase YP_004241183.1 PFAM: PAC2 family YP_004241184.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_004241185.1 PFAM: peptidase family M50 YP_004241186.1 PFAM: tRNA methyltransferase complex GCD14 subunit YP_004241187.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: proteasome ATPase YP_004241188.1 PFAM: Pup-ligase protein; TIGRFAM: proteasome accessory factor PafA2 YP_004241189.1 PFAM: Pup-like protein; TIGRFAM: ubiquitin-like protein Pup YP_004241190.1 PFAM: Proteasome subunit; TIGRFAM: proteasome, beta subunit, bacterial type YP_004241191.1 PFAM: Proteasome subunit; TIGRFAM: proteasome, alpha subunit, bacterial type YP_004241192.1 PFAM: Pup-ligase protein; TIGRFAM: proteasome accessory factor PafA YP_004241193.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_004241194.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_004241197.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_004241198.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_004241199.1 PFAM: DEAD/DEAH box helicase; DSHCT (NUC185) domain YP_004241200.1 PFAM: Amidohydrolase family YP_004241201.1 PFAM: glycosyl transferase family 2 YP_004241203.1 PFAM: SPFH domain / Band 7 family YP_004241204.1 PFAM: NfeD-like YP_004241205.1 PFAM: methyltransferase domain YP_004241206.1 PFAM: polypeptide deformylase; TIGRFAM: peptide deformylase YP_004241207.1 PFAM: SnoaL-like polyketide cyclase YP_004241208.1 PFAM: FAD binding domain YP_004241209.1 PFAM: methyltransferase domain YP_004241210.1 PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain YP_004241211.1 PFAM: Phage integrase family YP_004241214.1 PFAM: META domain YP_004241216.1 PFAM: Bacterial transcriptional activator domain YP_004241219.1 PFAM: polysaccharide deacetylase YP_004241222.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_004241223.1 PFAM: protein of unknown function (DUF3054) YP_004241224.1 PFAM: AsnC family YP_004241225.1 PFAM: glycosyl transferase family, a/b domain; glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_004241226.1 PFAM: cytochrome C oxidase subunit III YP_004241227.1 PFAM: cytochrome C YP_004241228.1 PFAM: Rieske [2Fe-2S] domain YP_004241229.1 PFAM: cytochrome b(N-terminal)/b6/petB YP_004241230.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_004241231.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: phosphotransferase System HPr (HPr) Family YP_004241233.1 PFAM: cytochrome C oxidase subunit IV YP_004241234.1 PFAM: cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome C oxidase subunit I YP_004241235.1 PFAM: cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome C oxidase subunit II YP_004241236.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_004241237.1 PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain YP_004241238.1 PFAM: protein of unknown function (DUF3043) YP_004241239.1 PFAM: dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_004241240.1 PFAM: alpha/beta hydrolase fold YP_004241241.1 PFAM: alpha/beta hydrolase fold YP_004241242.1 PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_004241243.1 PFAM: recombination protein O C terminal; recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_004241244.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type YP_004241245.1 PFAM: peptidase family M13 YP_004241246.1 PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_004241247.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_004241248.1 PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain YP_004241249.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_004241250.1 PFAM: PhoH-like protein YP_004241251.1 PFAM: sporulation and spore germination YP_004241252.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_004241253.1 PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_004241254.1 PFAM: DeoR-like helix-turn-helix domain; HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_004241255.1 PFAM: protein of unknown function (DUF3097) YP_004241257.1 PFAM: radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_004241258.1 PFAM: Elongation factor G C-terminus; GTP-binding protein LepA C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_004241259.1 PFAM: PemK-like protein YP_004241260.1 PFAM: ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_004241261.1 PFAM: DNA polymerase III subunits gamma and tau domain III; DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III delta subunit YP_004241262.1 PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein YP_004241263.1 PFAM: SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_004241264.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_004241265.1 PFAM: tRNA synthetases class I (I, L, M and V); anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_004241266.1 PFAM: PEP-utilising enzyme, mobile domain; pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_004241267.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_004241268.1 PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_004241269.1 PFAM: FAD dependent oxidoreductase YP_004241270.1 PFAM: sugar-binding domain YP_004241271.1 PFAM: Aldo/keto reductase family YP_004241272.1 PFAM: alpha/beta hydrolase fold YP_004241273.1 PFAM: glycosyl transferases group 1 YP_004241274.1 TIGRFAM: primosomal protein N' YP_004241275.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase YP_004241276.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_004241277.1 TIGRFAM: DNA-directed RNA polymerase subunit omega YP_004241278.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_004241280.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_004241281.1 PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; carbamoyl-phosphate synthetase large chain, oligomerisation domain; carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_004241282.1 PFAM: carbamoyl-phosphate synthase small chain, CPSase domain; glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_004241284.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_004241285.1 PFAM: aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_004241286.1 PFAM: phosphoribosyl transferase domain YP_004241289.1 PFAM: triosephosphate isomerase YP_004241290.1 PFAM: Major Facilitator Superfamily YP_004241292.1 PFAM: short chain dehydrogenase YP_004241293.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_004241294.1 PFAM: ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_004241295.1 PFAM: DAK2 domain; Dak1 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit YP_004241296.1 PFAM: Xylose isomerase-like TIM barrel YP_004241297.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004241298.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_004241299.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_004241301.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_004241302.1 PFAM: shikimate kinase YP_004241303.1 PFAM: chorismate synthase; TIGRFAM: chorismate synthase YP_004241304.1 PFAM: shikimate dehydrogenase substrate binding domain; shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_004241305.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_004241306.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_004241307.1 PFAM: DHHA1 domain; threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_004241309.1 PFAM: Bacterial protein of unknown function (DUF948) YP_004241310.1 PFAM: ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_004241311.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA) YP_004241313.1 PFAM: acetyltransferase (GNAT) family YP_004241314.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_004241315.1 PFAM: Amino acid permease YP_004241316.1 PFAM: anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_004241317.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_004241318.1 PFAM: Domain of Unknown Function (DUF349) YP_004241320.1 PFAM: HD domain; ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_004241321.1 PFAM: protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_004241322.1 PFAM: protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_004241323.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_004241324.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, Ruvsubunit beta YP_004241325.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, Ruvsubunit alpha YP_004241326.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_004241327.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_004241328.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_004241329.1 PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain YP_004241330.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain YP_004241331.1 PFAM: Bacterial capsule synthesis protein PGA_cap YP_004241332.1 PFAM: peptidase family M3 YP_004241333.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_004241334.1 PFAM: CDP-alcohol phosphatidyltransferase YP_004241335.1 PFAM: HIT domain YP_004241336.1 PFAM: anticodon binding domain; threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; (Thr YP_004241337.1 PFAM: Bacterial DNA polymerase III subunit alpha; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_004241341.1 PFAM: chorismate mutase type II YP_004241342.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004241343.1 PFAM: Uncharacterised ACR, COG2135 YP_004241344.1 PFAM: glutaredoxin; TIGRFAM: glutaredoxin-like protein YP_004241346.1 PFAM: ABC1 family YP_004241347.1 PFAM: transcriptional regulator PadR-like family YP_004241349.1 PFAM: endonuclease/exonuclease/phosphatase family YP_004241350.1 PFAM: NUDIX domain YP_004241351.1 PFAM: Domain of unknown function (DUF1918) YP_004241352.1 TIGRFAM: phosphoesterase, MJ0936 family YP_004241353.1 PFAM: short chain dehydrogenase YP_004241354.1 PFAM: protein of unknown function (DUF1810) YP_004241355.1 PFAM: DNA alkylation repair enzyme YP_004241356.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger YP_004241357.1 PFAM: LysM domain YP_004241358.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_004241359.1 PFAM: Amino acid permease YP_004241360.1 PFAM: metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z YP_004241363.1 TIGRFAM: probable adenylate-forming enzyme YP_004241364.1 PFAM: Predicted membrane protein (DUF2078) YP_004241367.1 PFAM: Universal stress protein family YP_004241370.1 PFAM: Universal stress protein family YP_004241371.1 PFAM: polysaccharide deacetylase YP_004241372.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase P YP_004241375.1 PFAM: Universal stress protein family YP_004241376.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004241377.1 PFAM: histidine kinase; GAF domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004241379.1 PFAM: Universal stress protein family YP_004241380.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_004241381.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein YP_004241382.1 PFAM: Hsp20/alpha crystallin family YP_004241383.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase YP_004241384.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_004241385.1 PFAM: Universal stress protein family YP_004241386.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_004241388.1 PFAM: Flavodoxin YP_004241389.1 PFAM: pyridoxamine 5'-phosphate oxidase YP_004241391.1 PFAM: Bacterial transcription activator, effector binding domain YP_004241395.1 PFAM: Domain of unknown function (DUF1508) YP_004241396.1 PFAM: ABC transporter YP_004241397.1 PFAM: ABC transporter YP_004241398.1 PFAM: ABC transporter YP_004241400.1 PFAM: short chain dehydrogenase YP_004241401.1 PFAM: Universal stress protein family YP_004241403.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004241406.1 PFAM: HNH endonuclease YP_004241408.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2087) YP_004241409.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004241411.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241412.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241413.1 PFAM: glycosyl hydrolases family 32 C terminal; glycosyl hydrolases family 32 N-terminal domain YP_004241417.1 PFAM: von Willebrand factor type A domain YP_004241419.1 PFAM: antibiotic biosynthesis monooxygenase YP_004241422.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004241423.1 PFAM: Zn-finger in ubiquitin-hydrolases and other protein YP_004241424.1 PFAM: CBS domain YP_004241425.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_004241426.1 PFAM: protein of unknown function (DUF3090); TIGRFAM: conserved hypothetical protein YP_004241427.1 PFAM: ribonucleotide reductase, small chain YP_004241428.1 PFAM: ribonucleotide reductase N-terminal; ribonucleotide reductase, all-alpha domain; ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha YP_004241429.1 PFAM: NrdI Flavodoxin like; TIGRFAM: ribonucleoside-diphosphate reductase 2, operon protein nrdI YP_004241430.1 PFAM: glutaredoxin; TIGRFAM: glutaredoxin-like protein NrdH YP_004241431.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004241432.1 PFAM: protein of unknown function (DUF1365) YP_004241433.1 PFAM: Flavin containing amine oxidoreductase YP_004241434.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004241436.1 PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase YP_004241437.1 PFAM: methylenetetrahydrofolate reductase YP_004241439.1 PFAM: von Willebrand factor type A domain YP_004241440.1 PFAM: von Willebrand factor type A domain YP_004241442.1 PFAM: protein of unknown function DUF58 YP_004241443.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_004241445.1 PFAM: Calcineurin-like phosphoesterase YP_004241446.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241447.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241448.1 PFAM: Bacterial extracellular solute-binding protein YP_004241449.1 PFAM: ROK family YP_004241450.1 PFAM: methyltransferase small domain YP_004241451.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004241452.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004241455.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_004241457.1 PFAM: Helix-turn-helix YP_004241458.1 PFAM: nucleotidyltransferase domain YP_004241460.1 PFAM: ThiF family YP_004241461.1 TIGRFAM: integrative and conjugative element protein, VC0181 family YP_004241463.1 PFAM: TrwC relaxase; TIGRFAM: conjugative relaxase domain, TrwC/TraI family YP_004241464.1 PFAM: short chain dehydrogenase YP_004241465.1 PFAM: Integrase core domain YP_004241466.1 PFAM: transposase YP_004241468.1 PFAM: NUDIX domain YP_004241469.1 PFAM: Integrase core domain YP_004241471.1 PFAM: transposase YP_004241472.1 PFAM: Integrase core domain YP_004241473.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004241474.1 PFAM: transposase YP_004241475.1 PFAM: Integrase core domain YP_004241477.1 PFAM: ATP dependent DNA ligase domain YP_004241478.1 PFAM: transposase DDE domain YP_004241479.1 PFAM: Ribbon-helix-helix protein, copG family YP_004241481.1 PFAM: Major Facilitator Superfamily YP_004241482.1 PFAM: dihydrodipicolinate synthetase family YP_004241483.1 PFAM: Cupin domain YP_004241484.1 PFAM: Integrase core domain YP_004241486.1 PFAM: Integrase core domain YP_004241487.1 PFAM: transposase IS116/IS110/IS902 family YP_004241488.1 PFAM: transposase YP_004241489.1 PFAM: Integrase core domain YP_004241491.1 PFAM: Integrase core domain YP_004241492.1 PFAM: transposase YP_004241494.1 PFAM: transposase DDE domain YP_004241495.1 PFAM: Integrase core domain YP_004241497.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004241499.1 PFAM: DoxX YP_004241500.1 PFAM: HxlR-like helix-turn-helix YP_004241501.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_004241503.1 PFAM: Phage integrase family YP_004241504.1 PFAM: IclR helix-turn-helix domain YP_004241505.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004241506.1 PFAM: Eco57I restriction endonuclease YP_004241507.1 PFAM: N-6 DNA methylase YP_004241508.1 PFAM: prophage CP4-57 regulator protein (AlpA); TIGRFAM: DNA binding domain, excisionase family YP_004241509.1 PFAM: prolyl oligopeptidase family YP_004241513.1 PFAM: Domain of unknown function (DUF955) YP_004241514.1 PFAM: Bifunctional DNA primase/polymerase, N-terminal; Primase C terminal 1 (PriCT-1) YP_004241515.1 PFAM: protein of unknown function (DUF2637) YP_004241518.1 PFAM: ParB-like nuclease domain YP_004241520.1 PFAM: peptidase family M23 YP_004241529.1 PFAM: TraG/TraD family YP_004241530.1 PFAM: Single-strand binding protein family YP_004241533.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_004241535.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_004241537.1 PFAM: aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_004241538.1 PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase YP_004241539.1 PFAM: GTPase of unknown function; GTP1/OBG; Domain of unknown function (DUF1967); TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension YP_004241540.1 PFAM: ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_004241541.1 PFAM: ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_004241542.1 PFAM: phosphomethylpyrimidine kinase; TENA/THI-4/PQQC family; TIGRFAM: phosphomethylpyrimidine kinase YP_004241543.1 PFAM: ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_004241544.1 PFAM: Vitamin K epoxide reductase family YP_004241545.1 PFAM: nucleoside diphosphate kinase YP_004241547.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_004241548.1 PFAM: tRNA synthetases class I (I, L, M and V); anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase YP_004241550.1 PFAM: short chain dehydrogenase YP_004241551.1 PFAM: tRNA synthetases class I (I, L, M and V); anticodon-binding domain YP_004241552.1 PFAM: DSBA-like thioredoxin domain YP_004241553.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_004241554.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP YP_004241555.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP YP_004241556.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_004241557.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS YP_004241558.1 PFAM: ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_004241560.1 PFAM: peptidase family M1; Domain of unknown function (DUF3358); TIGRFAM: aminopeptidase N, Streptomyces lividans type YP_004241561.1 PFAM: OsmC-like protein YP_004241562.1 PFAM: NAD dependent epimerase/dehydratase family YP_004241563.1 PFAM: Mechanosensitive ion channel YP_004241564.1 PFAM: Bacterial-like globin YP_004241566.1 PFAM: acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II YP_004241567.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family YP_004241569.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_004241570.1 PFAM: Integrase core domain YP_004241571.1 PFAM: ROK family YP_004241572.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase, Arthrobacter type YP_004241573.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase YP_004241574.1 PFAM: Xylose isomerase-like TIM barrel YP_004241575.1 PFAM: protein of unknown function (DUF993) YP_004241576.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004241577.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004241578.1 PFAM: alpha/beta hydrolase fold YP_004241579.1 PFAM: aldose 1-epimerase YP_004241580.1 PFAM: DNA alkylation repair enzyme YP_004241583.1 PFAM: exonuclease YP_004241584.1 PFAM: polypeptide deformylase; TIGRFAM: peptide deformylase YP_004241585.1 PFAM: Domain of unknown function (DUF1994) YP_004241587.1 PFAM: glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase YP_004241588.1 PFAM: TspO/MBR family YP_004241589.1 PFAM: protein of unknown function (DUF328) YP_004241590.1 PFAM: zinc ribbon domain YP_004241591.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_004241592.1 PFAM: peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_004241593.1 PFAM: pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_004241594.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_004241595.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating YP_004241596.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004241598.1 PFAM: Sir2 family YP_004241599.1 PFAM: AhpC/TSA family YP_004241600.1 PFAM: protein of unknown function (DUF3052) YP_004241601.1 PFAM: transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type YP_004241603.1 PFAM: acyl transferase domain YP_004241604.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_004241605.1 PFAM: phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_004241606.1 PFAM: beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_004241607.1 PFAM: protein of unknown function (DUF3145) YP_004241608.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_004241609.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_004241610.1 PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein YP_004241611.1 PFAM: Uncharacterised protein family UPF0102 YP_004241612.1 PFAM: protein of unknown function (DUF2469) YP_004241613.1 PFAM: ribonuclease HII YP_004241614.1 PFAM: peptidase S26; peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_004241615.1 PFAM: peptidase S26; peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_004241616.1 PFAM: ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_004241617.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_004241618.1 PFAM: RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_004241619.1 PFAM: KH domain YP_004241620.1 PFAM: ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_004241622.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004241623.1 PFAM: Amidohydrolase family YP_004241624.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_004241625.1 PFAM: alpha/beta hydrolase fold YP_004241626.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_004241627.1 PFAM: glucose-6-phosphate dehydrogenase, C-terminal domain; glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_004241628.1 PFAM: nitrogen regulatory protein P-II YP_004241629.1 PFAM: Ammonium transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11 YP_004241630.1 PFAM: Major Facilitator Superfamily YP_004241631.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_004241632.1 PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type YP_004241633.1 PFAM: Major Facilitator Superfamily YP_004241634.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_004241635.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_004241636.1 PFAM: ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_004241637.1 PFAM: Uncharacterized ACR, COG1399 YP_004241638.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_004241639.1 PFAM: Aminotransferase class I and II YP_004241641.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_004241642.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_004241643.1 PFAM: DAK2 domain YP_004241644.1 PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_004241645.1 PFAM: protein of unknown function (DUF3515) YP_004241646.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_004241647.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_004241648.1 PFAM: acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_004241649.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004241650.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_004241651.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_004241652.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004241653.1 PFAM: protein of unknown function (DUF1697) YP_004241654.1 PFAM: GTPase of unknown function YP_004241655.1 PFAM: Dynamin family YP_004241657.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004241658.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_004241659.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_004241660.1 PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family YP_004241661.1 PFAM: metallo-beta-lactamase superfamily YP_004241663.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II YP_004241664.1 PFAM: isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_004241665.1 PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein YP_004241667.1 PFAM: tRNA synthetases class I (M); anticodon-binding domain; TIGRFAM: methionyl-tRNA synthetase YP_004241668.1 PFAM: ABC transporter YP_004241669.1 PFAM: Predicted permease YP_004241670.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase YP_004241671.1 PFAM: acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_004241672.1 PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit YP_004241673.1 PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_004241674.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_004241676.1 PFAM: glucose / Sorbosone dehydrogenase YP_004241677.1 PFAM: MarR family YP_004241678.1 PFAM: AhpC/TSA family YP_004241679.1 PFAM: Fasciclin domain YP_004241680.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004241681.1 PFAM: malate:quinone oxidoreductase (Mqo); TIGRFAM: malate:quinone-oxidoreductase YP_004241682.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_004241683.1 PFAM: Luciferase-like monooxygenase YP_004241684.1 PFAM: MarR family YP_004241685.1 PFAM: transglutaminase-like superfamily YP_004241687.1 PFAM: protein of unknown function (DUF1684) YP_004241688.1 PFAM: Aminotransferase class-V YP_004241689.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_004241690.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase YP_004241691.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, subunit alpha YP_004241692.1 PFAM: NUDIX domain YP_004241693.1 PFAM: Amino acid permease YP_004241694.1 PFAM: alpha/beta hydrolase fold YP_004241695.1 PFAM: phosphoribosyl transferase domain YP_004241696.1 PFAM: Major Facilitator Superfamily YP_004241697.1 PFAM: IclR helix-turn-helix domain YP_004241698.1 PFAM: Major Facilitator Superfamily YP_004241699.1 TIGRFAM: exonuclease SbcC YP_004241700.1 PFAM: Calcineurin-like phosphoesterase; type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD YP_004241701.1 PFAM: Major intrinsic protein YP_004241702.1 PFAM: ADP-ribosylglycohydrolase YP_004241704.1 PFAM: exonuclease YP_004241705.1 PFAM: SNARE associated Golgi protein YP_004241706.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_004241707.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_004241708.1 PFAM: metallo-beta-lactamase superfamily YP_004241709.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_004241710.1 PFAM: Domain of unknown function (DUF2017) YP_004241711.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_004241712.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase YP_004241713.1 PFAM: Isochorismatase family YP_004241714.1 PFAM: Helicase conserved C-terminal domain; type III restriction enzyme, res subunit YP_004241715.1 PFAM: protein of unknown function (DUF3039) YP_004241716.1 PFAM: glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_004241718.1 PFAM: ABC transporter YP_004241719.1 PFAM: protein of unknown function (DUF3253) YP_004241720.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_004241721.1 PFAM: thioredoxin YP_004241723.1 PFAM: Domain of unknown function DUF20 YP_004241726.1 PFAM: protein of unknown function DUF91 YP_004241727.1 PFAM: 'Cold-shock' DNA-binding domain YP_004241728.1 PFAM: Uncharacterized conserved protein (DUF2156) YP_004241729.1 PFAM: esterase YP_004241730.1 PFAM: protein of unknown function (DUF2550) YP_004241731.1 PFAM: ATP synthase, delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 subunit epsilon (delta in mitochondria) YP_004241732.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 subunit beta YP_004241733.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_004241734.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 subunit alpha YP_004241735.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 subunit delta YP_004241736.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_004241737.1 PFAM: ATP synthase subunit C YP_004241738.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_004241741.1 PFAM: glycosyl transferase family 4 YP_004241742.1 PFAM: glycosyl transferase family 2 YP_004241743.1 PFAM: glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_004241744.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_004241745.1 PFAM: methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_004241746.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_004241747.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho YP_004241748.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase YP_004241749.1 PFAM: pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_004241750.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD binding domain; ACT domain YP_004241751.1 PFAM: pyridoxal-dependent decarboxylase, C-terminal sheet domain; pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_004241752.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_004241753.1 PFAM: FMN-binding domain YP_004241754.1 PFAM: ApbE family YP_004241756.1 PFAM: Thermolysin metallopeptidase, alpha-helical domain; Thermolysin metallopeptidase, catalytic domain YP_004241758.1 PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family YP_004241760.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA YP_004241761.1 PFAM: HIT domain YP_004241762.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004241763.1 PFAM: Rhodanese-like domain YP_004241764.1 PFAM: pyridoxal-phosphate dependent enzyme YP_004241766.1 PFAM: ferric uptake regulator family YP_004241767.1 PFAM: ABC 3 transport family YP_004241768.1 PFAM: ABC transporter YP_004241769.1 PFAM: Periplasmic solute binding protein family YP_004241770.1 PFAM: CBS domain; Domain of unknown function DUF21 YP_004241771.1 PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain YP_004241772.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); dehydrogenase E1 component; transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component YP_004241775.1 PFAM: transcriptional regulator PadR-like family YP_004241776.1 TIGRFAM: anti-sigma factor, TIGR02949 family YP_004241777.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family YP_004241778.1 PFAM: DoxX YP_004241779.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_004241780.1 PFAM: protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_004241781.1 PFAM: inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family YP_004241782.1 PFAM: Aminotransferase class-V YP_004241783.1 PFAM: methyltransferase domain YP_004241784.1 PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_004241785.1 PFAM: CrcB-like protein YP_004241786.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_004241788.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_004241789.1 PFAM: Integrase core domain YP_004241790.1 PFAM: RmlD substrate binding domain; dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose reductase YP_004241791.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_004241792.1 PFAM: nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_004241793.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_004241794.1 PFAM: peptidase family M23 YP_004241795.1 PFAM: Predicted permease YP_004241796.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; type II (general) Secretory Pathway (IISP) Family protein YP_004241797.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2 YP_004241800.1 PFAM: TadE-like protein YP_004241802.1 PFAM: Bacterial type II secretion system protein F domain YP_004241803.1 PFAM: Bacterial type II secretion system protein F domain YP_004241804.1 PFAM: type II/IV secretion system protein YP_004241805.1 PFAM: LGFP repeat; glycosyl hydrolases family 25 YP_004241808.1 PFAM: Uncharacterized conserved protein (DUF2304) YP_004241809.1 PFAM: glycosyl transferase family 2 YP_004241810.1 PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein C-terminal YP_004241811.1 PFAM: glycosyl transferases group 1 YP_004241812.1 PFAM: transposase YP_004241813.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004241815.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_004241816.1 PFAM: NAD dependent epimerase/dehydratase family YP_004241818.1 PFAM: ABC transporter YP_004241819.1 PFAM: ABC transporter YP_004241820.1 PFAM: glycosyl transferase family 2 YP_004241821.1 PFAM: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase YP_004241822.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_004241823.1 PFAM: FtsK/SpoIIIE family; FHA domain YP_004241825.1 PFAM: transcription factor WhiB YP_004241826.1 PFAM: histidine kinase; Signal transduction histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold YP_004241827.1 PFAM: Bacterial NAD-glutamate dehydrogenase YP_004241828.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004241830.1 TIGRFAM: DNA binding domain, excisionase family YP_004241832.1 PFAM: LysM domain YP_004241834.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, Secsubunit alpha YP_004241835.1 PFAM: protein of unknown function (DUF1006) YP_004241836.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_004241837.1 PFAM: phosphoribosyl transferase domain YP_004241838.1 PFAM: Lipoprotein LpqB beta-propeller domain; sporulation and spore germination YP_004241839.1 PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004241840.1 PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal YP_004241844.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_004241845.1 PFAM: protein of unknown function DUF58 YP_004241848.1 PFAM: chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, alpha proteobacterial type YP_004241849.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_004241850.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241851.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004241852.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_004241853.1 PFAM: Aminotransferase class-V YP_004241855.1 PFAM: DnaJ domain YP_004241856.1 PFAM: SpoU rRNA methylase family; TIGRFAM: rRNA methylase, , group 2 YP_004241857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004241858.1 PFAM: anti-sigma-K factor rskA YP_004241859.1 PFAM: GlcNAc-PI de-N-acetylase YP_004241860.1 PFAM: electron transfer flavoprotein domain; electron transfer flavoprotein FAD-binding domain YP_004241861.1 PFAM: electron transfer flavoprotein domain YP_004241862.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_004241864.1 PFAM: PspA/IM30 family YP_004241865.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase YP_004241866.1 PFAM: cytochrome b(N-terminal)/b6/petB YP_004241867.1 PFAM: Uncharacterised protein family (UPF0182) YP_004241868.1 PFAM: Lon protease (S16) C-terminal proteolytic domain YP_004241869.1 PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: hydrolase YP_004241870.1 PFAM: protein of unknown function DUF45 YP_004241871.1 PFAM: HRDC domain; UvrD/REP helicase YP_004241872.1 PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain YP_004241873.1 PFAM: phosphotransferase enzyme family YP_004241874.1 PFAM: UvrD/REP helicase YP_004241875.1 PFAM: UvrD/REP helicase YP_004241876.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain YP_004241877.1 PFAM: exonuclease YP_004241878.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_004241879.1 PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: amine acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family YP_004241880.1 PFAM: ABC transporter YP_004241881.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_004241882.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: probable oxidoreductase, LLM family YP_004241883.1 PFAM: delta-aminolevulinic acid dehydratase YP_004241884.1 PFAM: uroporphyrinogen-III synthase HemD YP_004241885.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_004241886.1 PFAM: chlorite dismutase YP_004241888.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase YP_004241889.1 PFAM: uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_004241890.1 PFAM: glutamyl-tRNAGlu reductase, N-terminal domain; shikimate / quinate 5-dehydrogenase; glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_004241891.1 PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family YP_004241892.1 PFAM: Bacterial regulatory proteins, tetR family YP_004241893.1 PFAM: protein of unknown function (DUF3107) YP_004241895.1 PFAM: Pterin 4 alpha carbinolamine dehydratase YP_004241896.1 PFAM: Thiazole biosynthesis protein ThiG YP_004241897.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_004241898.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO YP_004241899.1 PFAM: thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_004241900.1 PFAM: RNB domain YP_004241901.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_004241902.1 PFAM: DNA methylase YP_004241903.1 PFAM: PHP domain YP_004241904.1 PFAM: Aminopeptidase P, N-terminal domain; metallopeptidase family M24 YP_004241906.1 PFAM: MgtE intracellular N domain; CBS domain; PRC-barrel domain YP_004241907.1 PFAM: protein of unknown function (DUF1003) YP_004241908.1 PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; ATPase MipZ YP_004241909.1 TIGRFAM: twin arginine-targeting protein translocase TatB YP_004241911.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004241912.1 PFAM: O-methyltransferase YP_004241913.1 PFAM: protein of unknown function (DUF3117) YP_004241915.1 PFAM: DivIVA protein; TIGRFAM: DivIVA domain YP_004241916.1 PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2 YP_004241917.1 PFAM: ABC transporter YP_004241918.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_004241919.1 PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: amine acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family YP_004241920.1 PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: amine acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family YP_004241921.1 PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase YP_004241922.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_004241925.1 PFAM: Bacterial regulatory proteins, tetR family YP_004241926.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_004241927.1 PFAM: citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_004241928.1 PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase YP_004241929.1 PFAM: 4Fe-4S binding domain YP_004241931.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_004241933.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_004241934.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241935.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241936.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004241937.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004241938.1 PFAM: GTPase of unknown function; protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; small GTP-binding protein domain YP_004241939.1 PFAM: RmuC family YP_004241940.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) YP_004241942.1 PFAM: exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII large subunit YP_004241943.1 PFAM: exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII small subunit YP_004241944.1 PFAM: polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family YP_004241945.1 PFAM: Aminotransferase class I and II YP_004241946.1 PFAM: substrate binding domain of ABC-type glycine betaine transporter YP_004241947.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241948.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004241949.1 PFAM: ABC transporter YP_004241950.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_004241951.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_004241952.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_004241953.1 PFAM: Major Facilitator Superfamily YP_004241954.1 PFAM: AsnC family YP_004241955.1 PFAM: Major Facilitator Superfamily YP_004241956.1 PFAM: AsnC family YP_004241958.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transporter (corA) YP_004241961.1 PFAM: acetyltransferase (GNAT) family YP_004241962.1 PFAM: nucleotidyl transferase YP_004241963.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_004241964.1 PFAM: Zinc ribbon domain; TIGRFAM: regulatory protein, FmdB family YP_004241965.1 PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB YP_004241967.1 PFAM: GMP synthase C terminal domain; glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or subunit beta; GMP synthase (glutamine-hydrolyzing), N-terminal domain or subunit alpha YP_004241969.1 PFAM: SURF1 family YP_004241970.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_004241971.1 PFAM: FAD dependent oxidoreductase YP_004241972.1 PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: IMP dehydrogenase family protein YP_004241973.1 PFAM: ABC transporter YP_004241974.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_004241975.1 PFAM: acyltransferase family YP_004241976.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004241978.1 PFAM: Bacterial regulatory proteins, luxR family YP_004241979.1 PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1) YP_004241980.1 PFAM: RibD C-terminal domain YP_004241981.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_004241982.1 PFAM: chaperonin 10 Kd subunit YP_004241983.1 PFAM: EamA-like transporter family YP_004241986.1 PFAM: shikimate dehydrogenase substrate binding domain; shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_004241987.1 PFAM: glycosyl hydrolase family 3 N terminal domain YP_004241989.1 PFAM: glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme YP_004241990.1 PFAM: glycoprotease family; TIGRFAM: glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_004241991.1 PFAM: acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_004241992.1 PFAM: glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_004241993.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_004241994.1 PFAM: alanine racemase, C-terminal domain; alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_004241995.1 PFAM: pfkB family carbohydrate kinase YP_004241996.1 PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain YP_004241997.1 PFAM: glycosyl transferases group 1; TIGRFAM: UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase YP_004241998.1 PFAM: formate--tetrahydrofolate ligase YP_004241999.1 PFAM: myo-inositol-1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase, Actinobacterial type YP_004242000.1 PFAM: Aldo/keto reductase family YP_004242001.1 PFAM: alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase YP_004242002.1 PFAM: alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase YP_004242003.1 PFAM: carbohydrate-binding module 48 (Isoamylase N-terminal domain); alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX YP_004242004.1 PFAM: carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region YP_004242005.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase YP_004242006.1 PFAM: phosphoribulokinase / Uridine kinase family; TIGRFAM: pantothenate kinase, bacterial type YP_004242007.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_004242008.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_004242009.1 PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_004242011.1 PFAM: GtrA-like protein; glycosyl transferase family 2 YP_004242013.1 PFAM: ribosomal protein S9/S16 YP_004242014.1 PFAM: ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_004242015.1 PFAM: type IV leader peptidase family YP_004242016.1 PFAM: Flp/Fap pilin component YP_004242017.1 PFAM: Flp/Fap pilin component YP_004242018.1 PFAM: TadE-like protein YP_004242020.1 TIGRFAM: Flp pilus assembly protein CpaB YP_004242021.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004242022.1 PFAM: type II/IV secretion system protein YP_004242023.1 PFAM: Bacterial type II secretion system protein F domain YP_004242024.1 PFAM: Bacterial type II secretion system protein F domain YP_004242025.1 PFAM: Flp/Fap pilin component YP_004242026.1 PFAM: TadE-like protein YP_004242028.1 TIGRFAM: Flp pilus assembly protein CpaB YP_004242029.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004242030.1 PFAM: type II/IV secretion system protein YP_004242031.1 PFAM: Bacterial type II secretion system protein F domain YP_004242032.1 PFAM: Bacterial type II secretion system protein F domain YP_004242034.1 PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal YP_004242035.1 PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_004242036.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_004242037.1 PFAM: ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_004242038.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, subunit alpha, bacterial and chloroplast-type YP_004242039.1 PFAM: ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_004242040.1 PFAM: ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_004242041.1 PFAM: ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_004242042.1 PFAM: translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_004242043.1 PFAM: peptidase family S58 YP_004242044.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_004242045.1 PFAM: adenylate kinase; TIGRFAM: adenylate kinases YP_004242046.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_004242047.1 PFAM: ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_004242048.1 PFAM: ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_004242049.1 PFAM: ribosomal protein S5, C-terminal domain; ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_004242050.1 PFAM: ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_004242051.1 PFAM: ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_004242052.1 PFAM: ribosomal protein S8 YP_004242053.1 PFAM: ribosomal L5P family C-terminus; ribosomal protein L5 YP_004242054.1 TIGRFAM: ribosomal protein L24, bacterial/organelle YP_004242055.1 PFAM: ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_004242057.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004242058.1 PFAM: IstB-like ATP binding protein YP_004242059.1 PFAM: Integrase core domain YP_004242060.1 PFAM: transposase YP_004242061.1 PFAM: Integrase core domain YP_004242062.1 PFAM: transposase IS116/IS110/IS902 family YP_004242063.1 PFAM: ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_004242064.1 PFAM: ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_004242065.1 PFAM: ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_004242066.1 PFAM: KH domain; ribosomal protein S3, C-terminal domain; ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_004242067.1 PFAM: ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_004242068.1 PFAM: ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_004242069.1 PFAM: ribosomal proteins L2, RNA binding domain; ribosomal proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_004242070.1 PFAM: ribosomal protein L23 YP_004242071.1 PFAM: ribosomal protein L4/L1 family YP_004242072.1 PFAM: ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_004242073.1 PFAM: ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_004242074.1 PFAM: glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase YP_004242075.1 PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_004242076.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_004242077.1 PFAM: ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_004242078.1 PFAM: ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_004242079.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_004242080.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase subunit beta external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase subunit beta; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase subunit beta YP_004242081.1 PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_004242082.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_004242083.1 PFAM: ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_004242084.1 PFAM: ribosomal protein L10 YP_004242085.1 PFAM: acetyltransferase (GNAT) family YP_004242086.1 PFAM: acetyltransferase (GNAT) family YP_004242087.1 PFAM: ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_004242088.1 PFAM: ribosomal protein L11, RNA binding domain; ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_004242089.1 PFAM: transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG YP_004242090.1 PFAM: SecE/Sec61-subunit gammas of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_004242091.1 PFAM: Aminotransferase class I and II YP_004242092.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004242093.1 PFAM: PspC domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004242094.1 PFAM: PspC domain YP_004242096.1 PFAM: PspC domain YP_004242097.1 PFAM: phosphofructokinase; TIGRFAM: phosphofructokinase YP_004242098.1 PFAM: acetyltransferase (GNAT) family YP_004242099.1 PFAM: ankyrin repeat YP_004242100.1 PFAM: Aminomethyltransferase folate-binding domain; glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ YP_004242101.1 PFAM: Domain of unknown function (DUF1794) YP_004242104.1 PFAM: transcriptional regulatory protein, C terminal YP_004242105.1 PFAM: acetyltransferase (GNAT) family; TIGRFAM: mycothiol biosynthesis acetyltransferase YP_004242106.1 PFAM: polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_004242107.1 PFAM: NUDIX domain; phosphoglycerate mutase family YP_004242109.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_004242110.1 PFAM: dihydrofolate reductase YP_004242115.1 PFAM: semialdehyde dehydrogenase, dimerisation domain; semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase, gamma-proteobacterial YP_004242117.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_004242119.1 PFAM: MaoC like domain YP_004242121.1 PFAM: protein of unknown function (DUF3188) YP_004242122.1 PFAM: protein of unknown function (DUF2797) YP_004242123.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_004242124.1 PFAM: Aldo/keto reductase family YP_004242125.1 PFAM: alpha amylase, catalytic domain YP_004242126.1 PFAM: ROK family; IclR helix-turn-helix domain YP_004242127.1 PFAM: NmrA-like family YP_004242128.1 PFAM: RibD C-terminal domain YP_004242130.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_004242131.1 PFAM: MOSC domain YP_004242133.1 PFAM: glutathionylspermidine synthase YP_004242134.1 PFAM: Amino acid permease YP_004242135.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain YP_004242136.1 PFAM: short chain dehydrogenase YP_004242137.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_004242138.1 PFAM: CBS domain; pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase YP_004242139.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004242141.1 PFAM: AMP-binding enzyme YP_004242142.1 PFAM: antibiotic biosynthesis monooxygenase YP_004242143.1 PFAM: thioredoxin; TIGRFAM: thioredoxin YP_004242144.1 PFAM: ABC transporter YP_004242145.1 PFAM: ABC transporter YP_004242146.1 PFAM: thioesterase; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family YP_004242147.1 PFAM: ion channel YP_004242148.1 PFAM: LysM domain YP_004242149.1 PFAM: CBS domain YP_004242151.1 PFAM: protein of unknown function (DUF520) YP_004242152.1 PFAM: peptidase family M48 YP_004242153.1 PFAM: Bacterial protein of unknown function (DUF894) YP_004242154.1 PFAM: ferric uptake regulator family YP_004242155.1 PFAM: catalase; catalase-related immune-responsive YP_004242156.1 PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: conserved hypothetical protein TIGR02453 YP_004242157.1 PFAM: ABC transporter YP_004242158.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242159.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242160.1 PFAM: NMT1/THI5 like YP_004242162.1 PFAM: Amino acid permease YP_004242163.1 PFAM: protein of unknown function (DUF779) YP_004242164.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004242165.1 PFAM: aldehyde dehydrogenase family YP_004242167.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004242168.1 PFAM: Eukaryotic DNA topoisomerase I, catalytic core YP_004242169.1 PFAM: EamA-like transporter family; TIGRFAM: rarD protein YP_004242170.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004242171.1 PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type YP_004242172.1 PFAM: aldehyde dehydrogenase family; TIGRFAM: 1-pyrroline dehydrogenase YP_004242173.1 PFAM: Purine catabolism regulatory protein-like family YP_004242174.1 PFAM: CYTH domain; CHAD domain YP_004242175.1 PFAM: Major Facilitator Superfamily YP_004242176.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004242177.1 PFAM: Domain of unknown function DUF20 YP_004242180.1 PFAM: Domain of Unknown Function (DUF1206) YP_004242181.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004242182.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004242183.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain YP_004242185.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242186.1 PFAM: ABC transporter YP_004242187.1 PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter substrate-binding protein, aliphatic sulfonates family YP_004242188.1 PFAM: Uncharacterized protein family UPF0027 YP_004242189.1 PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit YP_004242190.1 PFAM: phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit YP_004242191.1 PFAM: phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin) YP_004242192.1 PFAM: nitrite and sulphite reductase 4Fe-4S domain; nitrite/Sulfite reductase ferredoxin-like half domain YP_004242193.1 PFAM: CbiX YP_004242194.1 PFAM: UPF0126 domain YP_004242196.1 PFAM: protein of unknown function (DUF559) YP_004242197.1 PFAM: polyprenyl synthetase YP_004242198.1 PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family YP_004242199.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_004242200.1 PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases YP_004242201.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_004242202.1 PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: amine acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family YP_004242203.1 PFAM: ABC transporter YP_004242204.1 PFAM: Aminotransferase class I and II YP_004242205.1 PFAM: thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase YP_004242206.1 PFAM: Bacterial protein of unknown function (DUF839) YP_004242207.1 PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase YP_004242208.1 PFAM: PAP2 superfamily YP_004242209.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242210.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242211.1 PFAM: Bacterial extracellular solute-binding protein YP_004242212.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242213.1 PFAM: Amylo-alpha-1,6-glucosidase YP_004242214.1 PFAM: GtrA-like protein YP_004242215.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_004242216.1 PFAM: glycosyl transferase family 2 YP_004242218.1 PFAM: Domain of unknown function (DUF1929) YP_004242220.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing) YP_004242222.1 PFAM: glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme YP_004242223.1 PFAM: peptidase C26 YP_004242224.1 PFAM: methyltransferase domain YP_004242225.1 PFAM: Domain of unknown function DUF302 YP_004242230.1 PFAM: Major Facilitator Superfamily YP_004242234.1 PFAM: protein kinase domain YP_004242239.1 PFAM: ABC transporter YP_004242243.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family YP_004242244.1 PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain YP_004242245.1 PFAM: Helix-turn-helix YP_004242247.1 PFAM: NmrA-like family YP_004242248.1 PFAM: ANTAR domain YP_004242250.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004242251.1 PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain YP_004242252.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004242254.1 PFAM: BNR/Asp-box repeat YP_004242256.1 PFAM: acyltransferase family YP_004242257.1 PFAM: acyltransferase family YP_004242259.1 PFAM: peptidoglycan binding domain; Matrixin YP_004242261.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004242263.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004242264.1 PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004242265.1 PFAM: glycosyl hydrolase family 3 C terminal domain; glycosyl hydrolase family 3 N terminal domain YP_004242266.1 PFAM: Major Facilitator Superfamily YP_004242267.1 PFAM: Bacterial regulatory proteins, tetR family YP_004242269.1 PFAM: beta-lactamase YP_004242270.1 PFAM: GAF domain YP_004242271.1 PFAM: endonuclease/exonuclease/phosphatase family YP_004242272.1 PFAM: GDSL-like Lipase/acylhydrolase YP_004242273.1 PFAM: diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family YP_004242275.1 PFAM: metallo-beta-lactamase superfamily YP_004242276.1 PFAM: protein of unknown function (DUF3036) YP_004242277.1 PFAM: Helix-turn-helix YP_004242278.1 PFAM: OsmC-like protein YP_004242279.1 PFAM: methyltransferase domain YP_004242280.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004242281.1 PFAM: histidine kinase; HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004242283.1 PFAM: protein of unknown function (DUF1538) YP_004242285.1 PFAM: CBS domain YP_004242286.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242288.1 PFAM: pfkB family carbohydrate kinase YP_004242289.1 PFAM: glycosyl hydrolases family 32 C terminal; glycosyl hydrolases family 32 N-terminal domain YP_004242290.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242291.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242292.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242293.1 PFAM: Bacterial extracellular solute-binding protein YP_004242295.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_004242296.1 PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain YP_004242297.1 PFAM: dehydrogenase E1 component YP_004242298.1 PFAM: AsnC family YP_004242300.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004242301.1 PFAM: transposase YP_004242303.1 PFAM: glycosyl transferases group 1; Domain of unknown function (DUF1972) YP_004242307.1 PFAM: polysaccharide pyruvyl transferase YP_004242308.1 PFAM: capsule polysaccharide biosynthesis protein YP_004242309.1 PFAM: NeuB family YP_004242310.1 PFAM: Cytidylyltransferase; haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family YP_004242311.1 PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family YP_004242312.1 PFAM: Bacterial sugar transferase; TIGRFAM: undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_004242314.1 TIGRFAM: LPXTG-motif cell wall anchor domain YP_004242315.1 PFAM: VanZ like family YP_004242316.1 PFAM: nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_004242317.1 PFAM: alpha/beta hydrolase fold YP_004242318.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_004242319.1 PFAM: L-lactate permease; TIGRFAM: L-lactate transport YP_004242320.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004242321.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004242322.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase subunit GlcD YP_004242323.1 PFAM: L-lactate permease; TIGRFAM: L-lactate transport YP_004242324.1 PFAM: malate synthase; TIGRFAM: malate synthase A YP_004242325.1 PFAM: enoyl-CoA hydratase/isomerase family YP_004242326.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; oxidoreductase FAD-binding domain; oxidoreductase NAD-binding domain; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit YP_004242327.1 PFAM: Domain of unknown function DUF59; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit YP_004242328.1 PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit YP_004242329.1 PFAM: Phenylacetic acid degradation B; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit YP_004242330.1 PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit YP_004242333.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004242335.1 PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family YP_004242336.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_004242337.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004242338.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_004242339.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_004242340.1 PFAM: Bacterial regulatory protein, arsR family; Low molecular weight phosphotyrosine protein phosphatase YP_004242341.1 PFAM: Major intrinsic protein YP_004242342.1 PFAM: Bacterial regulatory protein, arsR family YP_004242343.1 PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain YP_004242345.1 PFAM: protein of unknown function (DUF2795) YP_004242346.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_004242347.1 PFAM: Multicopper oxidase YP_004242348.1 PFAM: Predicted membrane protein (DUF2078) YP_004242350.1 PFAM: NADPH-dependent FMN reductase YP_004242351.1 PFAM: Cupin domain YP_004242354.1 PFAM: MerR, DNA binding; MerR family regulatory protein YP_004242355.1 PFAM: Cation transporter; TIGRFAM: potassium uptake protein, TrkH family YP_004242356.1 PFAM: TrkA-N domain; TrkA-C domain YP_004242357.1 PFAM: Cobalamin synthesis protein cobW C-terminal domain YP_004242358.1 PFAM: Domain of Unknown Function (DUF326) YP_004242359.1 PFAM: Domain of unknown function (DUF305) YP_004242362.1 PFAM: protein of unknown function (DUF3040) YP_004242366.1 PFAM: Predicted membrane protein (DUF2254) YP_004242368.1 PFAM: Bacterial regulatory protein, arsR family YP_004242369.1 PFAM: Major Facilitator Superfamily YP_004242370.1 PFAM: glycosyl transferase family 2; polysaccharide deacetylase YP_004242372.1 PFAM: CsbD-like YP_004242373.1 PFAM: CBS domain; Domain of unknown function DUF21 YP_004242374.1 PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain YP_004242375.1 PFAM: glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme YP_004242377.1 PFAM: Domain of Unknown Function (DUF326) YP_004242379.1 PFAM: GAF domain; ANTAR domain YP_004242381.1 PFAM: GAF domain; ANTAR domain YP_004242382.1 PFAM: carbon-nitrogen hydrolase YP_004242383.1 PFAM: cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome C oxidase subunit II YP_004242384.1 PFAM: cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome C oxidase subunit I YP_004242385.1 PFAM: methyltransferase domain YP_004242386.1 PFAM: Predicted membrane protein (DUF2243) YP_004242387.1 PFAM: alcohol dehydrogenase GroES-like domain YP_004242388.1 PFAM: metallo-beta-lactamase superfamily YP_004242390.1 PFAM: transglycosylase YP_004242391.1 PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; TC 2.A.33.1.1 YP_004242392.1 PFAM: ANTAR domain; PAS fold YP_004242393.1 PFAM: Heavy-metal-associated domain YP_004242394.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_004242396.1 PFAM: Domain of unknown function (DUF305) YP_004242398.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004242399.1 PFAM: FAD binding domain YP_004242400.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_004242401.1 PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_004242402.1 PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_004242403.1 PFAM: cellulase (glycosyl hydrolase family 5) YP_004242404.1 PFAM: phosphoglycerate mutase family YP_004242405.1 PFAM: carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related YP_004242406.1 PFAM: Hsp20/alpha crystallin family YP_004242407.1 PFAM: FAD binding domain YP_004242409.1 PFAM: prolyl oligopeptidase, N-terminal beta-propeller domain; prolyl oligopeptidase family YP_004242410.1 PFAM: phosphopantetheine attachment site; AMP-binding enzyme YP_004242411.1 PFAM: protein of unknown function (DUF2945) YP_004242412.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004242413.1 PFAM: acetokinase family; TIGRFAM: acetate kinase YP_004242415.1 PFAM: DRTGG domain; phosphate acetyl/butaryl transferase; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: phosphate acetyltransferase YP_004242416.1 PFAM: thioesterase; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD YP_004242417.1 PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase YP_004242418.1 PFAM: metallo-beta-lactamase superfamily; alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004242419.1 PFAM: Bacterial regulatory proteins, tetR family YP_004242420.1 PFAM: Trypsin YP_004242422.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004242423.1 PFAM: MaoC like domain; aldehyde dehydrogenase family; TIGRFAM: phenylacetic acid degradation protein paaN YP_004242424.1 PFAM: thioesterase; TIGRFAM: uncharacterized domain 1 YP_004242430.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_004242431.1 PFAM: enoyl-CoA hydratase/isomerase family YP_004242432.1 PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase YP_004242433.1 PFAM: Pentapeptide repeats (8 copies) YP_004242434.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004242435.1 PFAM: CsbD-like YP_004242438.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_004242439.1 PFAM: Amino acid permease YP_004242440.1 PFAM: Rieske [2Fe-2S] domain YP_004242441.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; nitrite and sulphite reductase 4Fe-4S domain; nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit YP_004242443.1 PFAM: ABC 3 transport family YP_004242444.1 PFAM: ABC transporter YP_004242445.1 PFAM: Periplasmic solute binding protein family YP_004242446.1 PFAM: CAAX amino terminal protease family YP_004242448.1 PFAM: enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase) YP_004242449.1 PFAM: AMP-binding enzyme YP_004242450.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_004242454.1 PFAM: Dynamin family YP_004242455.1 PFAM: Dynamin family YP_004242457.1 PFAM: Bacterial regulatory proteins, luxR family YP_004242458.1 PFAM: Hsp70 protein YP_004242459.1 PFAM: cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_004242460.1 PFAM: ResB-like family YP_004242461.1 PFAM: cytochrome C biogenesis protein transmembrane region YP_004242462.1 PFAM: AhpC/TSA family YP_004242463.1 PFAM: phosphoglycerate mutase family YP_004242464.1 PFAM: YceI-like domain YP_004242467.1 PFAM: CoA binding domain; DNA-binding protein N-terminus YP_004242468.1 PFAM: glutaredoxin-like domain (DUF836) YP_004242469.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_004242470.1 TIGRFAM: DNA binding domain, excisionase family YP_004242471.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_004242472.1 TIGRFAM: sugar (glycoside-Pentoside-Hexuronide) transporter YP_004242473.1 PFAM: acetyl xylan esterase (AXE1) YP_004242475.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_004242476.1 PFAM: class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YP_004242477.1 PFAM: L-rhamnose isomerase (RhaA); TIGRFAM: L-rhamnose isomerase, Streptomyces subtype YP_004242478.1 PFAM: Domain of unknown function (DUF718) YP_004242479.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242482.1 PFAM: phosphotransferase enzyme family YP_004242485.1 PFAM: Domain of unknown function (DUF1961) YP_004242486.1 PFAM: GDSL-like Lipase/acylhydrolase YP_004242487.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242488.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242489.1 PFAM: Bacterial extracellular solute-binding protein YP_004242490.1 PFAM: protein of unknown function, DUF624 YP_004242491.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004242492.1 PFAM: Bacterial alpha-L-rhamnosidase YP_004242493.1 PFAM: Bacterial protein of unknown function (DUF894) YP_004242495.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242496.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004242497.1 PFAM: beta-galactosidase trimerisation domain; beta-galactosidase C-terminal domain; beta-galactosidase YP_004242498.1 PFAM: Bacterial extracellular solute-binding protein YP_004242499.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242500.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242501.1 PFAM: Bacterial extracellular solute-binding protein YP_004242502.1 PFAM: acetyl xylan esterase (AXE1) YP_004242503.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004242504.1 PFAM: metallopeptidase family M24 YP_004242505.1 PFAM: aldehyde dehydrogenase family YP_004242506.1 PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004242507.1 PFAM: dihydrodipicolinate synthetase family YP_004242508.1 PFAM: NAD dependent epimerase/dehydratase family YP_004242509.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004242510.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242511.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004242512.1 PFAM: FMN-dependent dehydrogenase YP_004242513.1 PFAM: Bacterial regulatory protein, arsR family YP_004242515.1 PFAM: histone deacetylase domain YP_004242516.1 PFAM: Cation transporter YP_004242517.1 PFAM: TrkA-N domain; TrkA-C domain YP_004242518.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_004242519.1 PFAM: Ppx/GppA phosphatase family YP_004242521.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_004242522.1 PFAM: methyltransferase small domain YP_004242525.1 PFAM: Rhodanese-like domain YP_004242527.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase; TIGRFAM: helicase/secretion neighborhood DEAH-box helicase YP_004242528.1 TIGRFAM: helicase/secretion neighborhood TadE-like protein YP_004242531.1 PFAM: Bacterial type II secretion system protein F domain YP_004242533.1 PFAM: type II/IV secretion system protein; TIGRFAM: helicase/secretion neighborhood ATPase YP_004242534.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: helicase/secretion neighborhood CpaE-like protein YP_004242535.1 PFAM: DNA polymerase family A YP_004242536.1 PFAM: NUDIX domain YP_004242537.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_004242539.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_004242540.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_004242541.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242542.1 PFAM: beta-galactosidase trimerisation domain; beta-galactosidase C-terminal domain; beta-galactosidase YP_004242543.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242544.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242545.1 PFAM: Bacterial extracellular solute-binding protein YP_004242546.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242547.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004242548.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242549.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242550.1 PFAM: Bacterial extracellular solute-binding protein YP_004242551.1 PFAM: Melibiase YP_004242552.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_004242553.1 PFAM: Trypsin; colicin V production protein YP_004242554.1 PFAM: Cyclic nucleotide-binding domain YP_004242555.1 PFAM: NUDIX domain YP_004242556.1 PFAM: endoribonuclease L-PSP YP_004242558.1 PFAM: Penicillin binding protein transpeptidase domain; transglycosylase YP_004242559.1 PFAM: Calcineurin-like phosphoesterase YP_004242560.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_004242561.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_004242563.1 PFAM: Helix-turn-helix YP_004242564.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004242565.1 PFAM: phosphoribosylglycinamide synthetase, N domain; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_004242566.1 PFAM: Mo-co oxidoreductase dimerisation domain; oxidoreductase molybdopterin binding domain YP_004242567.1 PFAM: L-asparaginase II YP_004242568.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004242570.1 PFAM: short chain dehydrogenase YP_004242571.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family YP_004242572.1 PFAM: Asp/Glu/Hydantoin racemase YP_004242573.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family YP_004242575.1 PFAM: uracil DNA glycosylase superfamily YP_004242576.1 PFAM: Aldo/keto reductase family YP_004242577.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain; aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain YP_004242578.1 PFAM: FAD binding domain in molybdopterin dehydrogenase YP_004242579.1 PFAM: XdhC and CoxI family YP_004242580.1 PFAM: Permease family YP_004242581.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_004242582.1 PFAM: Amidohydrolase family YP_004242584.1 PFAM: Uricase; TIGRFAM: urate oxidase YP_004242585.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease YP_004242586.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004242587.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_004242588.1 PFAM: malate synthase; TIGRFAM: malate synthase A YP_004242590.1 PFAM: Cupin domain; TIGRFAM: allantoin catabolism protein YP_004242591.1 PFAM: beta-lactamase YP_004242592.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004242594.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_004242596.1 PFAM: glycosyl hydrolases family 15 YP_004242597.1 PFAM: protein of unknown function DUF72 YP_004242598.1 PFAM: Uncharacterized conserved protein (DUF2183) YP_004242599.1 PFAM: glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase YP_004242600.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_004242602.1 PFAM: DnaJ domain YP_004242603.1 PFAM: Hsp20/alpha crystallin family YP_004242604.1 PFAM: MerR family regulatory protein YP_004242605.1 PFAM: PAP2 superfamily YP_004242606.1 PFAM: peptidase inhibitor I9; Subtilase family YP_004242607.1 PFAM: NAD dependent epimerase/dehydratase family YP_004242608.1 PFAM: adenylate kinase; TIGRFAM: adenylate kinases YP_004242609.1 PFAM: GAF domain; ANTAR domain YP_004242610.1 PFAM: alpha/beta hydrolase fold YP_004242612.1 PFAM: Fatty acid desaturase YP_004242613.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; oxidoreductase FAD-binding domain; oxidoreductase NAD-binding domain YP_004242614.1 PFAM: Luciferase-like monooxygenase YP_004242615.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family YP_004242616.1 PFAM: FAD dependent oxidoreductase YP_004242617.1 PFAM: Domain of unknown function DUF YP_004242620.1 PFAM: protein of unknown function (DUF2630) YP_004242621.1 PFAM: carbon-nitrogen hydrolase YP_004242622.1 PFAM: Ammonium transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11 YP_004242623.1 PFAM: transcriptional regulator PadR-like family YP_004242624.1 PFAM: Penicillin binding protein transpeptidase domain; transglycosylase YP_004242625.1 PFAM: acetyltransferase (GNAT) family YP_004242626.1 PFAM: Domain of unknown function (DUF1992) YP_004242627.1 PFAM: thioesterase; TIGRFAM: uncharacterized domain 1 YP_004242628.1 PFAM: activator of Hsp90 ATPase homolog 1-like protein YP_004242630.1 PFAM: peptidase family S51 YP_004242631.1 PFAM: ANTAR domain YP_004242632.1 PFAM: ANTAR domain YP_004242633.1 PFAM: GAF domain; ANTAR domain YP_004242634.1 PFAM: GAF domain; ANTAR domain YP_004242636.1 PFAM: ANTAR domain YP_004242638.1 PFAM: GAF domain; ANTAR domain YP_004242641.1 PFAM: CAAX amino terminal protease family YP_004242642.1 PFAM: 2-nitropropane dioxygenase YP_004242643.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004242645.1 PFAM: protein of unknown function (DUF817) YP_004242646.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2236) YP_004242647.1 PFAM: Hpt domain YP_004242654.1 PFAM: Universal stress protein family YP_004242658.1 PFAM: methylenetetrahydrofolate reductase YP_004242659.1 PFAM: radical SAM superfamily; TIGRFAM: lipoate synthase YP_004242660.1 PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form YP_004242661.1 PFAM: serine hydroxymethyltransferase YP_004242662.1 PFAM: glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_004242663.1 PFAM: glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: sarcosine oxidase subunit gamma family, heterotetrameric form; glycine cleavage system T protein YP_004242664.1 PFAM: glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating) YP_004242665.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004242666.1 PFAM: peptidase inhibitor I9; Subtilase family YP_004242667.1 PFAM: Domain of unknown function (DUF427) YP_004242668.1 PFAM: alpha-L-arabinofuranosidase C-terminus YP_004242669.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242670.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242671.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004242672.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242673.1 PFAM: metallo-beta-lactamase superfamily; Rhodanese-like domain YP_004242675.1 PFAM: F5/8 type C domain YP_004242679.1 PFAM: Matrixin YP_004242680.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004242681.1 PFAM: acetyltransferase (GNAT) family YP_004242683.1 PFAM: Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT YP_004242685.1 PFAM: ABC transporter YP_004242686.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: formaldehyde dehydrogenase, glutathione-independent YP_004242688.1 PFAM: Amidohydrolase YP_004242689.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004242690.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004242691.1 PFAM: enoyl-CoA hydratase/isomerase family YP_004242692.1 PFAM: CoA-transferase family III YP_004242693.1 PFAM: Bacterial extracellular solute-binding protein YP_004242694.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242695.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242696.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_004242697.1 PFAM: Demethylmenaquinone methyltransferase YP_004242698.1 PFAM: aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_004242699.1 PFAM: Iron-containing alcohol dehydrogenase YP_004242700.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004242701.1 PFAM: Cupin domain YP_004242702.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004242703.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; 5-methyltetrahydrofolate--homocysteine methyltransferase YP_004242705.1 PFAM: Integrase core domain YP_004242706.1 PFAM: IstB-like ATP binding protein YP_004242708.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_004242709.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_004242710.1 PFAM: carbon-nitrogen hydrolase YP_004242711.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242713.1 PFAM: GMC oxidoreductase YP_004242714.1 PFAM: Aldo/keto reductase family YP_004242715.1 PFAM: Branched-chain amino acid transporter / permease YP_004242716.1 PFAM: ABC transporter YP_004242717.1 PFAM: family YP_004242718.1 PFAM: ROK family YP_004242719.1 PFAM: Bacterial extracellular solute-binding protein YP_004242720.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242721.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242722.1 PFAM: alpha amylase, catalytic domain YP_004242725.1 PFAM: Small Multidrug Resistance protein YP_004242726.1 PFAM: Small Multidrug Resistance protein YP_004242727.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242728.1 PFAM: dihydrodipicolinate synthetase family YP_004242729.1 PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters YP_004242730.1 PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI YP_004242732.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_004242733.1 PFAM: Luciferase-like monooxygenase YP_004242734.1 PFAM: Demethylmenaquinone methyltransferase; Fumarylacetoacetate (FAA) hydrolase family YP_004242735.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004242736.1 PFAM: aldehyde dehydrogenase family; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_004242737.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_004242738.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_004242739.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_004242740.1 PFAM: Aldo/keto reductase family YP_004242741.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_004242742.1 PFAM: Helix-turn-helix YP_004242743.1 PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_004242744.1 PFAM: Major Facilitator Superfamily YP_004242745.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004242746.1 PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004242747.1 PFAM: Muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase YP_004242748.1 PFAM: Archaeal ATPase; Bacterial regulatory proteins, luxR family YP_004242749.1 PFAM: short chain dehydrogenase YP_004242750.1 PFAM: Ring hydroxylating subunit beta; TIGRFAM: benzoate 1,2-dioxygenase, small subunit YP_004242751.1 PFAM: Ring hydroxylating subunit alpha (catalytic domain); Rieske [2Fe-2S] domain; TIGRFAM: benzoate 1,2-dioxygenase, large subunit YP_004242752.1 PFAM: Dioxygenase; Catechol dioxygenase N terminus; TIGRFAM: catechol 1,2-dioxygenase, Actinobacterial YP_004242753.1 PFAM: Benzoate membrane transporter; TIGRFAM: benzoate transporter YP_004242755.1 PFAM: Major Facilitator Superfamily YP_004242756.1 PFAM: nitrate reductase subunit gamma; TIGRFAM: respiratory nitrate reductase, subunit gamma YP_004242757.1 PFAM: nitrate reductase subunit delta; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone YP_004242758.1 TIGRFAM: nitrate reductase subunit beta YP_004242759.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit YP_004242760.1 PFAM: DNA alkylation repair enzyme YP_004242761.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004242762.1 PFAM: PrpF protein YP_004242763.1 PFAM: tripartite tricarboxylate transporter family receptor YP_004242764.1 PFAM: tripartite tricarboxylate transporter TctA family YP_004242765.1 PFAM: Universal stress protein family YP_004242767.1 PFAM: protein of unknown function (DUF1232) YP_004242769.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004242770.1 PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004242771.1 PFAM: Predicted permease YP_004242772.1 PFAM: ABC transporter YP_004242773.1 PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004242774.1 PFAM: NADPH-dependent FMN reductase YP_004242777.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004242778.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004242780.1 PFAM: AsnC family YP_004242781.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_004242782.1 PFAM: Uncharacterized BCR, YitT family COG1284 YP_004242786.1 PFAM: pyridoxal-phosphate dependent enzyme YP_004242788.1 PFAM: Thymidylate kinase YP_004242790.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_004242791.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component; TC 4.A.1.1.5 YP_004242792.1 PFAM: phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; TC 4.A.1.1.5 YP_004242793.1 PFAM: phosphotransferase system, EIIC YP_004242794.1 PFAM: glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_004242795.1 PFAM: CutC family YP_004242796.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_004242798.1 PFAM: Predicted membrane protein (DUF2231); Rieske [2Fe-2S] domain YP_004242799.1 PFAM: antibiotic biosynthesis monooxygenase YP_004242800.1 PFAM: Sodium:dicarboxylate symporter family YP_004242802.1 PFAM: amidase YP_004242803.1 PFAM: AsnC family YP_004242804.1 PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_004242805.1 PFAM: Sugar (and other) transporter YP_004242806.1 PFAM: transcriptional regulator YP_004242808.1 PFAM: Domain of unknown function (DUF897) YP_004242809.1 PFAM: Xylose isomerase-like TIM barrel YP_004242810.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase YP_004242811.1 PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: glyoxylate carboligase YP_004242812.1 PFAM: glycerate kinase family; TIGRFAM: glycerate kinase YP_004242813.1 PFAM: Amidohydrolase family; TIGRFAM: allantoinase; dihydroorotase YP_004242814.1 PFAM: transcriptional regulatory protein, C terminal YP_004242815.1 PFAM: AhpC/TSA family YP_004242816.1 PFAM: Major Facilitator Superfamily YP_004242817.1 PFAM: acetyltransferase (GNAT) family YP_004242820.1 PFAM: Response regulator receiver domain YP_004242821.1 PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase YP_004242822.1 PFAM: HIUase/transthyretin family; TIGRFAM: hydroxyisourate hydrolase YP_004242824.1 PFAM: phosphoribosyl transferase domain; glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_004242825.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_004242826.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region YP_004242827.1 PFAM: ABC transporter YP_004242828.1 PFAM: Major Facilitator Superfamily YP_004242829.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004242830.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242831.1 PFAM: protein of unknown function (DUF3073) YP_004242833.1 PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_004242834.1 PFAM: ABC transporter; TOBE domain YP_004242835.1 PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: molybdate ABC transporter permease; NifC-like ABC-type porter YP_004242836.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein YP_004242837.1 PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain; DNA binding domain, excisionase family YP_004242839.1 PFAM: 2-phosphosulpholactate phosphatase YP_004242840.1 PFAM: Domain of unknown function (DUF307) YP_004242841.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_004242842.1 PFAM: HutD YP_004242843.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004242845.1 PFAM: ABC transporter; TOBE domain YP_004242846.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242847.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242848.1 PFAM: Bacterial extracellular solute-binding protein YP_004242849.1 PFAM: ROK family YP_004242850.1 PFAM: Ferritin-like domain YP_004242851.1 PFAM: Small Multidrug Resistance protein YP_004242852.1 PFAM: Small Multidrug Resistance protein YP_004242853.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242854.1 PFAM: Domain of unknown function (DUF3372); alpha amylase, catalytic domain; carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: alpha-1,6-glucosidases, pullulanase-type YP_004242856.1 PFAM: Aldo/keto reductase family YP_004242857.1 PFAM: metallo-beta-lactamase superfamily YP_004242858.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_004242859.1 PFAM: thiopurine S-methyltransferase (TPMT) YP_004242860.1 PFAM: Major Facilitator Superfamily YP_004242861.1 PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter YP_004242863.1 PFAM: methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_004242866.1 PFAM: Domain of Unknown Function (DUF1206) YP_004242868.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004242872.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242873.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_004242874.1 PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: amine acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family YP_004242875.1 PFAM: ABC transporter YP_004242876.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004242877.1 PFAM: FAD dependent oxidoreductase YP_004242878.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_004242880.1 PFAM: glycosyl hydrolases family 43 YP_004242881.1 PFAM: Ammonium transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11 YP_004242882.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242883.1 PFAM: Bacterial extracellular solute-binding protein YP_004242884.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242885.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242886.1 PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold YP_004242887.1 PFAM: Trehalose utilisation YP_004242888.1 PFAM: PhoD-like phosphatase YP_004242889.1 PFAM: glutamate/Leucine/phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_004242890.1 PFAM: AmiS/UreI family transporter YP_004242891.1 PFAM: alpha amylase, catalytic domain; TIGRFAM: trehalose synthase, Pseudomonas stutzeri type YP_004242892.1 PFAM: alpha amylase, catalytic domain YP_004242893.1 PFAM: prephenate dehydratase YP_004242894.1 PFAM: Phenol hydroxylase, C-terminal dimerisation domain; FAD binding domain YP_004242896.1 PFAM: Uncharacterised BCR, COG1937 YP_004242897.1 PFAM: protein of unknown function (DUF2892); Rhodanese-like domain YP_004242898.1 PFAM: Sulfite exporter TauE/SafE YP_004242899.1 PFAM: Rhodanese-like domain YP_004242900.1 PFAM: Rhodanese-like domain YP_004242901.1 PFAM: thioredoxin; TIGRFAM: thioredoxin YP_004242902.1 PFAM: Rhodanese-like domain YP_004242903.1 PFAM: metallo-beta-lactamase superfamily; Rhodanese-like domain YP_004242904.1 PFAM: Major Facilitator Superfamily YP_004242906.1 PFAM: MerR family regulatory protein YP_004242907.1 PFAM: DnaJ C terminal region; DnaJ domain YP_004242908.1 PFAM: GrpE YP_004242909.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_004242911.1 PFAM: MMPL family; TIGRFAM: transporter YP_004242912.1 PFAM: MarR family YP_004242913.1 PFAM: LysE type translocator; TIGRFAM: The Resistance to homoserine/threonine (RhtB) Family protein YP_004242914.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_004242915.1 PFAM: anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade YP_004242916.1 PFAM: polysaccharide deacetylase YP_004242917.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242918.1 PFAM: glycosyl hydrolase family 10 YP_004242919.1 PFAM: aldose 1-epimerase YP_004242920.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242921.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004242922.1 PFAM: glycosyl hydrolase family 3 C terminal domain; glycosyl hydrolase family 3 N terminal domain YP_004242924.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; Multidrug resistance protein YP_004242925.1 PFAM: phospholipase D Active site motif YP_004242926.1 PFAM: Aminotransferase class IV YP_004242927.1 PFAM: pyridoxamine 5'-phosphate oxidase YP_004242928.1 PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family YP_004242930.1 PFAM: Domain of unknown function (DUF1737) YP_004242931.1 PFAM: Rhodanese-like domain YP_004242932.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase YP_004242933.1 PFAM: Domain of unknown function (DUF1905) YP_004242934.1 PFAM: Domain of unknown function DUF222 YP_004242935.1 PFAM: glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme YP_004242936.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Helix-turn-helix; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004242938.1 PFAM: Cobalt transporter YP_004242939.1 PFAM: ABC transporter YP_004242940.1 PFAM: ABC-type cobalt transporter, permease component YP_004242942.1 PFAM: Domain of unknown function (DUF336) YP_004242946.1 PFAM: glycosyl transferase family 2 YP_004242947.1 PFAM: Iron-binding zinc finger CDGSH type YP_004242949.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; TC 2.A.63.1 YP_004242951.1 PFAM: Na+/H+ ion antiporter subunit YP_004242952.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_004242953.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_004242954.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to Mnhsubunit beta of Na+/H+ antiporter YP_004242955.1 PFAM: Vacuole effluxer Atg22 like YP_004242957.1 PFAM: TrkA-C domain YP_004242958.1 PFAM: Sodium/hydrogen exchanger family YP_004242959.1 PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase YP_004242960.1 PFAM: Cysteine-rich secretory protein family YP_004242961.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004242963.1 PFAM: alanine dehydrogenase/PNT, C-terminal domain; alanine dehydrogenase/PNT, N-terminal domain YP_004242964.1 PFAM: Bacterial protein of unknown function (DUF894) YP_004242965.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_004242967.1 PFAM: Proline dehydrogenase; aldehyde dehydrogenase family YP_004242968.1 PFAM: Amino acid permease YP_004242969.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_004242970.1 PFAM: aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_004242971.1 PFAM: membrane transporter YP_004242972.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase monomeric form YP_004242973.1 PFAM: Major Facilitator Superfamily YP_004242974.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1 YP_004242975.1 PFAM: Aldo/keto reductase family YP_004242976.1 PFAM: DJ-1/PfpI family YP_004242978.1 PFAM: Bacterial protein of unknown function (DUF853) YP_004242980.1 PFAM: AhpC/TSA family; NHL repeat YP_004242981.1 PFAM: cytochrome C oxidase caa3 assembly factor (Caa3_CtaG); Copper resistance protein D YP_004242982.1 PFAM: Bacterial DNA-binding protein YP_004242984.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004242985.1 PFAM: transposase DDE domain; transposase domain (DUF772) YP_004242986.1 PFAM: transposase, Mutator family YP_004242987.1 PFAM: glycosyl hydrolases family 2, TIM barrel domain; glycosyl hydrolases family 2, sugar binding domain; beta galactosidase small chain YP_004242988.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_004242989.1 PFAM: ribosomal protein S14p/S29e YP_004242990.1 PFAM: ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_004242991.1 PFAM: ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_004242992.1 PFAM: GDSL-like Lipase/acylhydrolase YP_004242993.1 PFAM: MarR family YP_004242994.1 PFAM: YCII-related domain YP_004242995.1 PFAM: GDSL-like Lipase/acylhydrolase YP_004242996.1 PFAM: transposase YP_004242997.1 PFAM: Integrase core domain YP_004242998.1 PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain YP_004242999.1 PFAM: ABC transporter YP_004243000.1 PFAM: FecCD transport family YP_004243001.1 PFAM: FecCD transport family YP_004243002.1 PFAM: Periplasmic binding protein YP_004243003.1 PFAM: Fibronectin-binding protein (FBP) YP_004243007.1 PFAM: protein of unknown function (DUF3375) YP_004243009.1 PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain YP_004243013.1 PFAM: Aldo/keto reductase family YP_004243014.1 PFAM: NmrA-like family YP_004243015.1 PFAM: Mo-co oxidoreductase dimerisation domain; oxidoreductase molybdopterin binding domain YP_004243016.1 PFAM: S4 domain YP_004243017.1 PFAM: Amidohydrolase family YP_004243019.1 PFAM: HNH endonuclease YP_004243022.1 PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain YP_004243024.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_004243025.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004243026.1 PFAM: L-asparaginase II YP_004243027.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase YP_004243028.1 PFAM: Amino acid permease YP_004243029.1 PFAM: gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_004243030.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase YP_004243031.1 PFAM: Bacterial low temperature requirement A protein (LtrA) YP_004243032.1 PFAM: carboxylesterase YP_004243034.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase YP_004243035.1 PFAM: IclR helix-turn-helix domain; AsnC family YP_004243036.1 PFAM: AsnC family YP_004243037.1 PFAM: LysE type translocator YP_004243041.1 PFAM: protein of unknown function (DUF456) YP_004243042.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_004243043.1 PFAM: Bacterial regulatory proteins, tetR family YP_004243044.1 PFAM: Major Facilitator Superfamily YP_004243045.1 PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy YP_004243046.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily YP_004243047.1 PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter sugar porter (SP) family YP_004243048.1 PFAM: acetyltransferase (GNAT) family YP_004243050.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_004243051.1 PFAM: phosphotransferase system, EIIC; PTS system, Lactose/cellobiose specific IIsubunit beta; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, mannitol-specific IIC component YP_004243052.1 PFAM: Bacterial regulatory proteins, tetR family YP_004243053.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_004243054.1 PFAM: TAP-like protein; alpha/beta hydrolase fold YP_004243055.1 TIGRFAM: DNA binding domain, excisionase family YP_004243057.1 PFAM: alanine dehydrogenase/PNT, C-terminal domain; alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_004243058.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain YP_004243059.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_004243060.1 PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain YP_004243061.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004243062.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004243063.1 PFAM: Bacterial regulatory proteins, tetR family YP_004243064.1 PFAM: NADPH-dependent FMN reductase YP_004243065.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA polymerase LigD, polymerase domain YP_004243067.1 PFAM: Aminotransferase class I and II YP_004243068.1 PFAM: Universal stress protein family YP_004243070.1 PFAM: PAP2 superfamily YP_004243071.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_004243072.1 PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain YP_004243073.1 PFAM: dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, subunit alpha YP_004243074.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_004243075.1 PFAM: GDSL-like Lipase/acylhydrolase; pectinesterase YP_004243076.1 PFAM: Pectate lyase YP_004243077.1 PFAM: membrane protein of unknown function YP_004243080.1 PFAM: Lyase; adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase YP_004243081.1 PFAM: phosphoglycerate mutase family YP_004243082.1 PFAM: protein kinase domain YP_004243084.1 PFAM: MarR family YP_004243085.1 PFAM: acetyltransferase (GNAT) family YP_004243086.1 PFAM: Bacterial extracellular solute-binding protein YP_004243087.1 PFAM: ABC transporter; TOBE domain YP_004243088.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004243089.1 PFAM: FAD binding domain YP_004243090.1 PFAM: Bacterial regulatory proteins, tetR family YP_004243091.1 PFAM: FAD binding domain; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase YP_004243092.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004243094.1 PFAM: ACT domain YP_004243095.1 PFAM: diacylglycerol kinase catalytic domain YP_004243096.1 PFAM: NAD(P) transhydrogenase subunit beta YP_004243098.1 PFAM: alanine dehydrogenase/PNT, C-terminal domain; alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, subunit alpha YP_004243099.1 PFAM: protein of unknown function (DUF419) YP_004243100.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family YP_004243101.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase subunit beta YP_004243102.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit alpha YP_004243103.1 PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_004243104.1 PFAM: carboxymuconolactone decarboxylase family; TIGRFAM: 4-carboxymuconolactone decarboxylase YP_004243105.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase YP_004243106.1 PFAM: Lyase; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase YP_004243107.1 PFAM: Dioxygenase; TIGRFAM: Listeria/Bacterioides repeat; protocatechuate 3,4-dioxygenase, subunit alpha YP_004243108.1 PFAM: Protocatechuate 3,4-dioxygenase subunit beta N terminal; Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase subunit beta YP_004243109.1 PFAM: Xylose isomerase-like TIM barrel; glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase YP_004243110.1 PFAM: shikimate dehydrogenase substrate binding domain; shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_004243111.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004243112.1 PFAM: Sugar (and other) transporter; Major Facilitator Superfamily YP_004243113.1 PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region YP_004243115.1 PFAM: membrane transporter YP_004243116.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family YP_004243117.1 PFAM: alpha amylase, catalytic domain; TIGRFAM: trehalose synthase YP_004243118.1 PFAM: Flavin reductase like domain YP_004243119.1 PFAM: polyketide cyclase / dehydrase and lipid transport YP_004243120.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family YP_004243121.1 PFAM: Taurine catabolism dioxygenase TauD, TfdA family YP_004243122.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004243123.1 PFAM: ABC transporter YP_004243124.1 PFAM: NMT1/THI5 like YP_004243125.1 PFAM: Aminotransferase class I and II YP_004243127.1 PFAM: ThiS family YP_004243128.1 PFAM: BNR/Asp-box repeat YP_004243132.1 PFAM: Universal stress protein family YP_004243133.1 PFAM: Uncharacterised BCR, COG1937 YP_004243134.1 PFAM: Heavy-metal-associated domain YP_004243135.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; ATPase P; ATPase P YP_004243136.1 PFAM: Uncharacterized conserved protein (DUF2277) YP_004243137.1 PFAM: proteins of 100 residues with WXG YP_004243138.1 PFAM: EamA-like transporter family YP_004243139.1 PFAM: protein of unknown function (DUF1470); CGNR zinc finger YP_004243142.1 PFAM: MatE; TIGRFAM: efflux protein, MATE family YP_004243143.1 PFAM: DoxX YP_004243144.1 PFAM: thioesterase YP_004243145.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_004243149.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: FMN reductase, MsuE subfamily YP_004243150.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_004243151.1 PFAM: DUF218 domain YP_004243152.1 PFAM: ribosomal protein L9, N-terminal domain; ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_004243153.1 PFAM: ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_004243154.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_004243155.1 PFAM: ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_004243156.1 PFAM: Amino acid permease; TIGRFAM: gamma-aminobutyrate permease; TC 2.A.3.1.5 YP_004243157.1 PFAM: Archaeal ATPase; Bacterial regulatory proteins, luxR family YP_004243158.1 PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_004243159.1 PFAM: oxidoreductase family, NAD-binding Rossmann fold YP_004243160.1 PFAM: NAD dependent epimerase/dehydratase family YP_004243161.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_004243162.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family YP_004243163.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_004243164.1 PFAM: polysaccharide biosynthesis protein YP_004243165.1 PFAM: glycosyl transferases group 1 YP_004243166.1 PFAM: glycosyl transferase family 2 YP_004243169.1 PFAM: O-antigen ligase YP_004243171.1 PFAM: glycosyl transferases group 1 YP_004243173.1 PFAM: glycosyl transferase WecB/TagA/CpsF family; glycosyl transferase family 2; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_004243174.1 PFAM: Mo-co oxidoreductase dimerisation domain YP_004243175.1 PFAM: Aminopeptidase I zinc metalloprotease (M18) YP_004243176.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004243177.1 PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004243179.1 PFAM: ABC transporter YP_004243180.1 PFAM: diacylglycerol kinase catalytic domain; PAP2 superfamily YP_004243181.1 PFAM: Major Facilitator Superfamily YP_004243182.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_004243183.1 PFAM: ABC transporter YP_004243184.1 PFAM: NTF2-like N-terminal transpeptidase domain; Penicillin binding protein transpeptidase domain; Penicillin-binding protein dimerisation domain YP_004243185.1 PFAM: Thi4 family YP_004243186.1 PFAM: protein of unknown function (DUF2029) YP_004243187.1 PFAM: phosphoglycerate mutase family YP_004243188.1 PFAM: HD domain; poly A polymerase head domain; TIGRFAM: tRNA adenylyltransferase; uncharacterized domain HDIG YP_004243189.1 PFAM: NUDIX domain YP_004243190.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_004243192.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_004243193.1 PFAM: thioredoxin; TIGRFAM: thioredoxin YP_004243194.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_004243195.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004243196.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB YP_004243197.1 PFAM: R3H domain YP_004243198.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain YP_004243199.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_004243200.1 PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004243201.1 PFAM: MarR family YP_004243202.1 PFAM: DoxX YP_004243203.1 PFAM: adenylate kinase; TIGRFAM: adenylate kinases YP_004243204.1 PFAM: MDMPI C-terminal domain; Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_004243205.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004243206.1 PFAM: Cupin domain; TIGRFAM: gentisate 1,2-dioxygenase YP_004243207.1 PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase YP_004243209.1 PFAM: FAD binding domain YP_004243210.1 PFAM: PaaX-like protein C-terminal domain; PaaX-like protein YP_004243211.1 PFAM: Major Facilitator Superfamily YP_004243212.1 PFAM: aldehyde dehydrogenase family YP_004243213.1 PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004243215.1 PFAM: transposase IS116/IS110/IS902 family YP_004243216.1 PFAM: Integrase core domain YP_004243218.1 PFAM: transposase, Mutator family YP_004243219.1 PFAM: transposase, Mutator family YP_004243220.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004243222.1 PFAM: Integrase core domain YP_004243223.1 PFAM: transposase YP_004243225.1 PFAM: Integrase core domain YP_004243227.1 PFAM: SCP-2 sterol transfer family YP_004243228.1 PFAM: Ring hydroxylating subunit alpha (catalytic domain); Rieske [2Fe-2S] domain YP_004243229.1 PFAM: Ring hydroxylating subunit beta YP_004243231.1 PFAM: short chain dehydrogenase YP_004243232.1 PFAM: dihydrodipicolinate synthetase family YP_004243233.1 PFAM: aldehyde dehydrogenase family YP_004243234.1 PFAM: MMPL family YP_004243235.1 PFAM: Bacterial regulatory proteins, tetR family YP_004243236.1 PFAM: Major Facilitator Superfamily YP_004243237.1 PFAM: Integrase core domain YP_004243238.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004243239.1 PFAM: aldehyde dehydrogenase family YP_004243240.1 PFAM: dihydrodipicolinate synthetase family YP_004243241.1 PFAM: Cupin domain YP_004243243.1 PFAM: AMP-binding enzyme YP_004243245.1 PFAM: DoxX YP_004243247.1 PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase YP_004243248.1 PFAM: Bacterial regulatory proteins, tetR family YP_004243249.1 PFAM: beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_004243250.1 PFAM: Major Facilitator Superfamily; Bacterial protein of unknown function (DUF894) YP_004243251.1 PFAM: Iron-containing alcohol dehydrogenase YP_004243252.1 PFAM: transposase YP_004243253.1 PFAM: Integrase core domain YP_004243254.1 PFAM: transposase DDE domain YP_004243255.1 PFAM: protein of unknown function (DUF1271) YP_004243256.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004243257.1 PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004243258.1 PFAM: Cupin domain YP_004243260.1 PFAM: Domain of unknown function (DUF3560) YP_004243263.1 PFAM: transposase, Mutator family; transposase DDE domain; transposase domain (DUF772) YP_004243265.1 PFAM: NMT1/THI5 like; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004243266.1 PFAM: ABC transporter YP_004243267.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004243268.1 PFAM: Binding-protein-dependent transporter inner membrane component YP_004243269.1 PFAM: Isochorismatase family YP_004243270.1 PFAM: Major Facilitator Superfamily YP_004243271.1 PFAM: Aldo/keto reductase family YP_004243272.1 PFAM: Ring hydroxylating subunit beta YP_004243274.1 PFAM: protein of unknown function (DUF1271) YP_004243275.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004243276.1 PFAM: class II Aldolase and Adducin N-terminal domain YP_004243277.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004243278.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_004243279.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase YP_004243280.1 PFAM: IstB-like ATP binding protein YP_004243281.1 PFAM: Integrase core domain YP_004243282.1 PFAM: Integrase core domain YP_004243283.1 PFAM: transposase YP_004243285.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004243286.1 PFAM: transposase, Mutator family YP_004243287.1 PFAM: transposase YP_004243288.1 PFAM: Integrase core domain YP_004243290.1 PFAM: Phage integrase family YP_004243291.1 PFAM: META domain YP_004243294.1 PFAM: Phage integrase family YP_004243296.1 PFAM: Domain of unkown function (DUF1775) YP_004243298.1 PFAM: NlpC/P60 family YP_004243299.1 PFAM: SURF1 family YP_004243300.1 PFAM: Bacterial regulatory protein, arsR family YP_004243301.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_004243303.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_004243304.1 PFAM: cytochrome C biogenesis protein transmembrane region YP_004243305.1 PFAM: cytochrome C oxidase caa3 assembly factor (Caa3_CtaG); Copper resistance protein D YP_004243306.1 PFAM: Bacterial regulatory protein, arsR family YP_004243307.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_004243308.1 PFAM: DSBA-like thioredoxin domain YP_004243310.1 PFAM: Copper resistance protein CopC YP_004243312.1 PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_004243313.1 PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters YP_004243315.1 PFAM: Domain of unknown function DUF87 YP_004243317.1 PFAM: protein of unknown function (DUF2743) YP_004243319.1 PFAM: TraG/TraD family YP_004243326.1 TIGRFAM: DNA binding domain, excisionase family YP_004243327.1 PFAM: CHAP domain YP_004243332.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004243335.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004243336.1 PFAM: Resolvase, N terminal domain YP_004243337.1 PFAM: Mu transposase, C-terminal; transposase; Integrase core domain YP_004243339.1 PFAM: transposase, Mutator family YP_004243340.1 PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase YP_004243343.1 PFAM: uracil DNA glycosylase superfamily YP_004243347.1 PFAM: Helix-turn-helix YP_004243348.1 PFAM: DNA methylase YP_004243349.1 PFAM: DNA methylase YP_004243351.1 PFAM: AAA domain (dynein-related subfamily) YP_004243355.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_004243356.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase YP_004243357.1 PFAM: IstB-like ATP binding protein YP_004243358.1 PFAM: Integrase core domain YP_004243362.1 PFAM: ATP dependent DNA ligase domain YP_004243367.1 PFAM: transposase IS116/IS110/IS902 family; transposase YP_004243369.1 PFAM: transposase, Mutator family YP_004243373.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_004243375.1 PFAM: glutaredoxin YP_004243376.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_004243379.1 TIGRFAM: DNA binding domain, excisionase family YP_004243381.1 PFAM: Bacterial mobilisation protein (MobC) YP_004243382.1 PFAM: Relaxase/Mobilisation nuclease domain YP_004243384.1 PFAM: RES domain YP_004243390.1 PFAM: Transposase, Mutator family YP_004243392.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_004243397.1 PFAM: ATP dependent DNA ligase domain YP_004243400.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm) YP_004243401.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004243402.1 PFAM: Z1 domain YP_004243404.1 PFAM: AIPR protein YP_004243405.1 PFAM: Ribbon-helix-helix protein, copG family YP_004243409.1 TIGRFAM: DNA binding domain, excisionase family YP_004243411.1 PFAM: Restriction endonuclease YP_004243412.1 PFAM: Resolvase, N terminal domain YP_004243414.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004243419.1 PFAM: CHAP domain YP_004243420.1 TIGRFAM: DNA binding domain, excisionase family YP_004243427.1 PFAM: TraG/TraD family YP_004243433.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004243434.1 PFAM: Amidohydrolase YP_004243435.1 PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YP_004243436.1 PFAM: Amidohydrolase YP_004243437.1 PFAM: Aromatic-ring-opening dioxygenase LigAB, LigA subunit; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: protocatechuate 4,5-dioxygenase, alpha subunit YP_004243438.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_004243439.1 PFAM: Aldo/keto reductase family YP_004243441.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004243442.1 PFAM: Class II Aldolase and Adducin N-terminal domain YP_004243443.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004243444.1 PFAM: Protein of unknown function (DUF1271) YP_004243446.1 PFAM: Ring hydroxylating beta subunit YP_004243447.1 PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain YP_004243448.1 PFAM: Aldo/keto reductase family YP_004243449.1 PFAM: Major Facilitator Superfamily YP_004243450.1 PFAM: Isochorismatase family YP_004243451.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_004243452.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_004243453.1 PFAM: ABC transporter YP_004243454.1 PFAM: NMT1/THI5 like YP_004243456.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_004243458.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_004243459.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_004243460.1 PFAM: Class II Aldolase and Adducin N-terminal domain YP_004243461.1 PFAM: IclR helix-turn-helix domain YP_004243462.1 PFAM: Ring hydroxylating beta subunit YP_004243463.1 PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain YP_004243464.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004243465.1 PFAM: Protein of unknown function (DUF1271) YP_004243466.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004243467.1 PFAM: Major Facilitator Superfamily YP_004243468.1 PFAM: Integral membrane protein (DUF2244) YP_004243471.1 PFAM: Phage integrase family YP_004243474.1 TIGRFAM: DNA binding domain, excisionase family YP_004243476.1 PFAM: Relaxase/Mobilisation nuclease domain YP_004243477.1 PFAM: Bacterial mobilisation protein (MobC) YP_004243480.1 TIGRFAM: DNA binding domain, excisionase family YP_004243483.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_004243484.1 PFAM: Glutaredoxin YP_004243486.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_004243487.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA