-- dump date 20140618_205016 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 572480000001 SEQ_END SEQ_END NC_014166.1 3192235 3192235 DR NC_014166.1; contig end 3192235..3192235 Arcobacter nitrofigilis DSM 7299 YP_003654177.1 CDS Arnit_0001 NC_014166.1 71 1384 D COGs: COG0593 ATPase involved in DNA replication initiation; InterProIPR020591:IPR010921:IPR003593:IPR013159:IPR 013317:IPR001957; KEGG: abu:Abu_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: A8EQT0 Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein DnaA 71..1384 Arcobacter nitrofigilis DSM 7299 9173253 YP_003654178.1 CDS Arnit_0002 NC_014166.1 1545 2615 D COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: abu:Abu_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: A8EQT1 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 1545..2615 Arcobacter nitrofigilis DSM 7299 9170134 YP_003654179.1 CDS Arnit_0003 NC_014166.1 2629 4947 D COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR001241:IPR000565:IPR013760:IPR003594:IPR 020568:IPR018522:IPR013759:IPR013506:IPR006171:IPR002288:I PR011557; KEGG: abu:Abu_0003 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: A8EQT2 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit B 2629..4947 Arcobacter nitrofigilis DSM 7299 9170135 YP_003654180.1 CDS Arnit_0004 NC_014166.1 5120 5452 D COGs: COG4679 Phage-related protein; InterPro IPR009241; KEGG: amr:AM1_6214 putative phage protein GP49; PFAM: protein of unknown function DUF891; SPTR: B0C629 Phage derived protein Gp49-like protein (DUF891); PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 5120..5452 Arcobacter nitrofigilis DSM 7299 9170136 YP_003654181.1 CDS Arnit_0005 NC_014166.1 5442 5741 D InterPro IPR010982:IPR001387; KEGG: amr:AM1_6215 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B0C630 Helix-turn-helix domain protein; PFAM: Helix-turn-helix; XRE family transcriptional regulator 5442..5741 Arcobacter nitrofigilis DSM 7299 9170137 YP_003654182.1 CDS Arnit_0006 NC_014166.1 5806 6309 D COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: abu:Abu_0267 metal-dependent hydrolase; PFAM: protein of unknown function DUF45; SPTR: A8ERG8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF45; hypothetical protein 5806..6309 Arcobacter nitrofigilis DSM 7299 9170138 YP_003654183.1 CDS Arnit_0007 NC_014166.1 6548 6943 D KEGG: pfo:Pfl01_5227 hypothetical protein; SPTR: Q3K5J0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3010); hypothetical protein 6548..6943 Arcobacter nitrofigilis DSM 7299 9170139 YP_003654184.1 CDS Arnit_0008 NC_014166.1 7254 8267 D COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: vsp:VS_II0405 TRAP dicarboxylate family transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: C9NTT3 Predicted gluconate TRAP family transporter DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; family 7 extracellular solute-binding protein 7254..8267 Arcobacter nitrofigilis DSM 7299 9170140 YP_003654185.1 CDS Arnit_0009 NC_014166.1 8267 8779 D InterPro IPR007387; KEGG: pin:Ping_2934 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: C9PCZ1 Predicted gluconate TRAP family transporter DctQ subunit; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ 8267..8779 Arcobacter nitrofigilis DSM 7299 9170141 YP_003654186.1 CDS Arnit_0010 NC_014166.1 8779 10104 D COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: rsk:RSKD131_4254 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q0G5L5 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 8779..10104 Arcobacter nitrofigilis DSM 7299 9170142 YP_003654187.1 CDS Arnit_0011 NC_014166.1 10156 11607 D COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR016160:IPR016162:IPR015590; KEGG: cff:CFF8240_0070 aldehyde dehydrogenase A; PFAM: Aldehyde Dehydrogenase; PRIAM: Glycolaldehyde dehydrogenase; SPTR: A0RM47 Aldehyde dehydrogenase A; PFAM: Aldehyde dehydrogenase family; glycolaldehyde dehydrogenase 10156..11607 Arcobacter nitrofigilis DSM 7299 9170143 YP_003654188.1 CDS Arnit_0012 NC_014166.1 11768 12952 R COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: bcm:Bcenmc03_6234 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: A5ZUR5 Putative uncharacterized protein; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; mandelate racemase/muconate lactonizing protein complement(11768..12952) Arcobacter nitrofigilis DSM 7299 9170144 YP_003654189.1 CDS Arnit_0013 NC_014166.1 12967 13863 R COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR020625:IPR013785; KEGG: gka:GK1961 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: A5ZUR8 Putative uncharacterized protein; PFAM: Dihydrodipicolinate synthetase family; dihydrodipicolinate synthetase complement(12967..13863) Arcobacter nitrofigilis DSM 7299 9170145 YP_003654190.1 CDS Arnit_0014 NC_014166.1 14054 14827 D COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: amt:Amet_0500 transcriptional regulator IclR-like protein; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SPTR: A6TKK9 Transcriptional regulator IclR-like protein; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; IclR family transcriptional regulator 14054..14827 Arcobacter nitrofigilis DSM 7299 9170146 YP_003654191.1 CDS Arnit_0015 NC_014166.1 14840 15472 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: spl:Spea_0493 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: C6MPJ6 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; lysine exporter protein complement(14840..15472) Arcobacter nitrofigilis DSM 7299 9170147 YP_003654192.1 CDS Arnit_0016 NC_014166.1 15513 16322 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR009057:IPR003313:IPR018062:IPR012287:IPR 018060:IPR000005; KEGG: vsa:VSAL_I1212 transcriptional regulator, AraC-family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; SPTR: A6DBM1 Transcriptional regulator, AraC family protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; AraC family transcriptional regulator complement(15513..16322) Arcobacter nitrofigilis DSM 7299 9170148 YP_003654193.1 CDS Arnit_0017 NC_014166.1 16329 17276 R COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: wsu:WS0748 immunogenic protein; SPTR: C1ZY21 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; TAXI family TRAP transporter solute receptor complement(16329..17276) Arcobacter nitrofigilis DSM 7299 9170149 YP_003654194.1 CDS Arnit_0018 NC_014166.1 17344 18192 R InterPro IPR000620; KEGG: abu:Abu_0604 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8ESE5 Membrane protein, putative (DUF6 domain protein); PFAM: EamA-like transporter family; hypothetical protein complement(17344..18192) Arcobacter nitrofigilis DSM 7299 9170150 YP_003654195.1 CDS Arnit_0019 NC_014166.1 18194 19222 R COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR000103:IPR001327; KEGG: nis:NIS_1734 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A6Q5T1 Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(18194..19222) Arcobacter nitrofigilis DSM 7299 9170151 YP_003654196.1 CDS Arnit_0020 NC_014166.1 19361 19738 D COGs: COG0780 Enzyme related to GTP cyclohydrolase I; InterPro IPR016856:IPR020602; KEGG: abu:Abu_0005 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: PreQ(1) synthase; SPTR: A8EQT4 7-cyano-7-deazaguanine reductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; 7-cyano-7-deazaguanine reductase 19361..19738 Arcobacter nitrofigilis DSM 7299 9170152 YP_003654197.1 CDS Arnit_0021 NC_014166.1 19742 20350 D KEGG: abu:Abu_0006 hypothetical protein; SPTR: A8EQT5 Putative uncharacterized protein; hypothetical protein 19742..20350 Arcobacter nitrofigilis DSM 7299 9170153 YP_003654198.1 CDS Arnit_0022 NC_014166.1 20558 21523 D COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR002114:IPR000620; KEGG: dvl:Dvul_0297 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C2A221 Predicted permease, DMT superfamily; PFAM: EamA-like transporter family; hypothetical protein 20558..21523 Arcobacter nitrofigilis DSM 7299 9170155 YP_003654199.1 CDS Arnit_0023 NC_014166.1 21520 21936 D COGs: COG1238 membrane protein; InterPro IPR020143:IPR015414; KEGG: abu:Abu_0007 putative integral membrane protein; PFAM: SNARE associated Golgi protein; SPTR: A8EQT6 Putative uncharacterized protein; PFAM: SNARE associated Golgi protein; hypothetical protein 21520..21936 Arcobacter nitrofigilis DSM 7299 9170156 YP_003654200.1 CDS Arnit_0024 NC_014166.1 21933 22703 R COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterProIPR008995:IPR011991:IPR016462:IPR000847:IPR 005116; KEGG: hya:HY04AAS1_0940 transcriptional regulator, ModE family; PFAM: TOBE domain protein; regulatory protein LysR; SPTR: B6BI33 Molybdenum-pterin-binding protein; PFAM: TOBE domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdenum-pterin binding domain; putative ModE family transcriptional regulator complement(21933..22703) Arcobacter nitrofigilis DSM 7299 9170157 YP_003654201.1 CDS Arnit_0025 NC_014166.1 22861 25557 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR009082:IPR001638:IPR 000014:IPR005467:IPR013767; KEGG: pin:Ping_0979 sensor histidine kinase; PFAM: extracellular solute-binding protein family 3; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAS domain containing protein; SPTR: A1STK4 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase 22861..25557 Arcobacter nitrofigilis DSM 7299 9170158 YP_003654202.1 CDS Arnit_0026 NC_014166.1 25587 25970 R InterPro IPR017900:IPR017896:IPR001450; KEGG: wsu:WS0032 hypothetical protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q7MSX0 Putative uncharacterized protein FDXA; 4Fe-4S ferredoxin complement(25587..25970) Arcobacter nitrofigilis DSM 7299 9170159 YP_003654203.1 CDS Arnit_0027 NC_014166.1 26029 26493 R InterPro IPR016181:IPR000182; KEGG: tgr:Tgr7_1703 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B8GS82 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(26029..26493) Arcobacter nitrofigilis DSM 7299 9170160 YP_003654204.1 CDS Arnit_0028 NC_014166.1 26477 27724 R COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR003593:IPR010603:IPR013093:IPR019489:IPR 004487; KEGG: wsu:WS1403 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: Q7M8U5 ATP-dependent Clp protease ATP-binding subunit clpX 2; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent Clp protease ATP-binding subunit ClpX complement(26477..27724) Arcobacter nitrofigilis DSM 7299 9170161 YP_003654205.1 CDS Arnit_0029 NC_014166.1 27717 28541 R KEGG: ttu:TERTU_1536 hypothetical protein; SPTR: C5BTA9 Putative uncharacterized protein; hypothetical protein complement(27717..28541) Arcobacter nitrofigilis DSM 7299 9170162 YP_003654206.1 CDS Arnit_0030 NC_014166.1 29117 29629 R InterPro IPR012335; KEGG: cha:CHAB381_1783 thiol peroxidase (scavengase P20); SPTR: B0NMN1 Putative uncharacterized protein; hypothetical protein complement(29117..29629) Arcobacter nitrofigilis DSM 7299 9170163 YP_003654207.1 CDS Arnit_0031 NC_014166.1 29613 31175 R COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterProIPR020441:IPR009057:IPR002078:IPR003018:IPR 003593:IPR002197; KEGG: wsu:WS1404 NifA family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase; SPTR: Q7M8U4 TRANSCRIPTIONAL REGULATOR (NIFA FAMILY); PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein; NifA subfamily transcriptional regulator complement(29613..31175) Arcobacter nitrofigilis DSM 7299 9170164 YP_003654208.1 CDS Arnit_0032 NC_014166.1 31257 31466 R InterPro IPR009727; KEGG: wsu:WS1400 hypothetical protein; PFAM: NifT/FixU family protein; SPTR: Q7MRF3 Putative uncharacterized protein; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT; nitrogen fixation protein FixT complement(31257..31466) Arcobacter nitrofigilis DSM 7299 9170165 YP_003654209.1 CDS Arnit_0033 NC_014166.1 31486 33135 R COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR015939:IPR003953:IPR004112; KEGG: wsu:WS1399 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: L-aspartate oxidase; SPTR: Q7M8U6 FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT; PFAM: domain; FAD binding domain; L-aspartate oxidase complement(31486..33135) Arcobacter nitrofigilis DSM 7299 9170166 YP_003654210.1 CDS Arnit_0034 NC_014166.1 33138 34247 R COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: wsu:WS1398 hypothetical protein; PFAM: aldo/keto reductase; SPTR: Q7MRF4 Putative uncharacterized protein; PFAM: Aldo/keto reductase family; aldo/keto reductase complement(33138..34247) Arcobacter nitrofigilis DSM 7299 9170167 YP_003654211.1 CDS Arnit_0035 NC_014166.1 34441 36864 D COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR013027:IPR007419:IPR006137; KEGG: sun:SUN_1652 Ni-Fe hydrogenase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: B6BMJ6 Quinone-reactive Ni/Fe-hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, 20 Kd subunit; BFD-like [2Fe-2S] binding domain; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); hydrogenase (NiFe) small subunit HydA 34441..36864 Arcobacter nitrofigilis DSM 7299 9170168 YP_003654212.1 CDS Arnit_0036 NC_014166.1 36864 38528 D COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: sun:SUN_1653 Ni-Fe hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: B6BMJ3 Quinone-reactive Ni/Fe-hydrogenase large chain; PFAM: Nickel-dependent hydrogenase; nickel-dependent hydrogenase large subunit 36864..38528 Arcobacter nitrofigilis DSM 7299 9170169 YP_003654213.1 CDS Arnit_0037 NC_014166.1 38525 39373 R COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638:IPR013785; KEGG: abu:Abu_0906 molybdenum transport system protein ModD, putative; PFAM: Quinolinate phosphoribosyl transferase; SPTR: A8ET92 Molybdenum transport system protein ModD, putative; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; quinolinate phosphoribosyl transferase complement(38525..39373) Arcobacter nitrofigilis DSM 7299 9170170 YP_003654214.1 CDS Arnit_0038 NC_014166.1 39429 39842 R InterPro IPR008995:IPR005116:IPR004606; KEGG: tdn:Suden_1548 molybdenum-pterin binding protein; PFAM: TOBE domain protein; SPTR: Q30QA6 Molybdenum-pterin binding protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain; TOBE domain-containing protein complement(39429..39842) Arcobacter nitrofigilis DSM 7299 9170171 YP_003654215.1 CDS Arnit_0039 NC_014166.1 39896 40573 R COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515:IPR011867; KEGG: cts:Ctha_1428 molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C6RH80 Molybdate ABC transporter, permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdate ABC transporter inner membrane subunit complement(39896..40573) Arcobacter nitrofigilis DSM 7299 9170172 YP_003654216.1 CDS Arnit_0040 NC_014166.1 40573 41280 R COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950; KEGG: tau:Tola_1211 molybdenum ABC transporter, periplasmic molybdate-binding protein; SPTR: C4LE08 Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(40573..41280) Arcobacter nitrofigilis DSM 7299 9170173 YP_003654217.1 CDS Arnit_0041 NC_014166.1 41331 42185 R COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: abu:Abu_0009 molybdenum ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B6BI30 Molybdenum transport ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(41331..42185) Arcobacter nitrofigilis DSM 7299 9170174 YP_003654218.1 CDS Arnit_0042 NC_014166.1 42189 42881 R COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515:IPR011867; KEGG: sun:SUN_2103 molybdenum ABC transporter, permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6QC35 Molybdenum ABC transporter, permease; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdate ABC transporter inner membrane subunit complement(42189..42881) Arcobacter nitrofigilis DSM 7299 9170175 YP_003654219.1 CDS Arnit_0043 NC_014166.1 42874 43275 R InterPro IPR008995:IPR005116; KEGG: abu:Abu_0011 hypothetical protein; PFAM: TOBE domain protein; SPTR: A8EQU0 Putative uncharacterized protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain; TOBE domain-containing protein complement(42874..43275) Arcobacter nitrofigilis DSM 7299 9170176 YP_003654220.1 CDS Arnit_0044 NC_014166.1 43272 44018 R COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR006059:IPR005950; KEGG: abu:Abu_0012 molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: A8EQU1 Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(43272..44018) Arcobacter nitrofigilis DSM 7299 9170177 YP_003654221.1 CDS Arnit_0045 NC_014166.1 44028 44447 R InterPro IPR008995:IPR005116:IPR004606; KEGG: abu:Abu_0013 molybdenum-binding protein; PFAM: TOBE domain protein; SPTR: A8EQU2 Molybdenum-binding protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain; TOBE domain-containing protein complement(44028..44447) Arcobacter nitrofigilis DSM 7299 9170178 YP_003654222.1 CDS Arnit_0046 NC_014166.1 44533 46074 R COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000318:IPR000510:IPR005976; KEGG: wsu:WS1391 nitrogenase beta subunit; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Q7M8U9 NITROGENASE BETA SUBUNIT; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: Domain of unknown function (DUF3364); Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; nitrogenase molybdenum-iron protein subunit beta complement(44533..46074) Arcobacter nitrofigilis DSM 7299 9170179 YP_003654223.1 CDS Arnit_0047 NC_014166.1 46076 47542 R COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000318:IPR000510:IPR005972:IPR010143; KEGG: wsu:WS1392 hypothetical protein; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Q7MRF8 Nitrogenase protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain; nitrogenase molybdenum-iron protein subunit alpha complement(46076..47542) Arcobacter nitrofigilis DSM 7299 9170180 YP_003654224.1 CDS Arnit_0048 NC_014166.1 47571 47930 R KEGG: wsu:WS1393 hypothetical protein; SPTR: Q7MRF7 Putative uncharacterized protein; hypothetical protein complement(47571..47930) Arcobacter nitrofigilis DSM 7299 9170181 YP_003654225.1 CDS Arnit_0049 NC_014166.1 48063 48977 R COGs: COG1348 Nitrogenase subunit NifH (ATPase); InterPro IPR000392:IPR005977; KEGG: wsu:WS1394 dinitrogenase reductase subunit; PFAM: NifH/frxC-family protein; PRIAM: Nitrogenase; SPTR: Q7M8U8 Nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; nitrogenase iron protein complement(48063..48977) Arcobacter nitrofigilis DSM 7299 9170182 YP_003654226.1 CDS Arnit_0050 NC_014166.1 49258 49905 R COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037; KEGG: abu:Abu_1288 trk system potassium uptake protein TrkA, putative; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: A8EUC1 TRK system potassium uptake protein TrkA, putative; PFAM: TrkA-N domain; TrkA-C domain; TrkA-N domain-containing protein complement(49258..49905) Arcobacter nitrofigilis DSM 7299 9170183 YP_003654227.1 CDS Arnit_0051 NC_014166.1 49902 51230 R COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445:IPR004772; KEGG: abu:Abu_1289 trk system potassium uptake protein TrkB, putative; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: A8EUC2 TRK system potassium uptake protein TrkB, putative; TIGRFAM: potassium uptake protein, TrkH family; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; TrkH family potassium uptake protein complement(49902..51230) Arcobacter nitrofigilis DSM 7299 9170184 YP_003654228.1 CDS Arnit_0052 NC_014166.1 51243 51932 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR016032:IPR001789:IPR001867; KEGG: abu:Abu_1290 two component system transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EUC3 Two component system transcriptional regulatory protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(51243..51932) Arcobacter nitrofigilis DSM 7299 9170185 YP_003654229.1 CDS Arnit_0053 NC_014166.1 51929 52960 R COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR004358:IPR003594:IPR009082:IPR003661:IPR 005467; KEGG: abu:Abu_1291 two-component regulatory protein sensor kinase KdpD; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EUC4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(51929..52960) Arcobacter nitrofigilis DSM 7299 9170186 YP_003654230.1 CDS Arnit_0054 NC_014166.1 53203 54654 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterProIPR004090:IPR001610:IPR004089:IPR000014:IPR 000700:IPR013655; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box; Pas/Pac sensor domaining-containing methyl-accepting chemotaxis sensory transducer complement(53203..54654) Arcobacter nitrofigilis DSM 7299 9170187 YP_003654231.1 CDS Arnit_0055 NC_014166.1 54794 56041 R COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: wsu:WS2100 RNA polymerase factor sigma-54; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor; sigma-54 factor core-binding region; SPTR: Q7M7T2 RNA POLYMERASE SIGMA-54 FACTOR; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma-54 factor subunit RpoN complement(54794..56041) Arcobacter nitrofigilis DSM 7299 9170188 YP_003654232.1 CDS Arnit_0056 NC_014166.1 56095 56391 R InterPro IPR001041:IPR006058:IPR012675; KEGG: wsu:WS1382 hypothetical protein; PFAM: ferredoxin; SPTR: Q7MRG5 Putative uncharacterized protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; ferredoxin complement(56095..56391) Arcobacter nitrofigilis DSM 7299 9170189 YP_003654233.1 CDS Arnit_0057 NC_014166.1 56589 56930 R KEGG: rpt:Rpal_2139 ferredoxin; SPTR: C5ESK5 D-serine ammonia-lyase; hypothetical protein complement(56589..56930) Arcobacter nitrofigilis DSM 7299 9170190 YP_003654234.1 CDS Arnit_0058 NC_014166.1 57023 57433 R InterPro IPR007415; KEGG: wsu:WS1383 putative nitrogen fixation protein; PFAM: NifZ family protein; SPTR: Q7M8V0 PUTATIVE NITROGEN FIXATION PROTEIN; PFAM: NifZ domain; NifZ family protein complement(57023..57433) Arcobacter nitrofigilis DSM 7299 9170191 YP_003654235.1 CDS Arnit_0059 NC_014166.1 57423 57758 R InterPro IPR004893; KEGG: wsu:WS1384 hypothetical protein; PFAM: nitrogen fixation protein NifW; SPTR: Q7MRG4 Putative uncharacterized protein hydA; PFAM: Nitrogen fixation protein NifW; nitrogen fixation protein NifW complement(57423..57758) Arcobacter nitrofigilis DSM 7299 9170192 YP_003654236.1 CDS Arnit_0060 NC_014166.1 57784 58299 R COGs: COG0716 Flavodoxins; InterPro IPR008254; KEGG: avn:Avin_45950 flavodoxin I; PFAM: flavodoxin/nitric oxide synthase; SPTR: B4WRT9 Flavodoxin; PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain; flavodoxin/nitric oxide synthase complement(57784..58299) Arcobacter nitrofigilis DSM 7299 9170193 YP_003654237.1 CDS Arnit_0061 NC_014166.1 58319 58750 R InterPro IPR004952; KEGG: msl:Msil_3626 nitrogen fixation protein; PFAM: protein of unknown function DUF269; SPTR: B8EJ19 Nitrogen fixation protein; TIGRFAM: nitrogen fixation protein; PFAM: Protein of unknown function, DUF269; TIGRFAM: probable nitrogen fixation protein; nitrogen fixation protein complement(58319..58750) Arcobacter nitrofigilis DSM 7299 9170194 YP_003654238.1 CDS Arnit_0062 NC_014166.1 58750 59145 R InterPro IPR003731; KEGG: wsu:WS1387 hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Q7MRG1 NIFX; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(58750..59145) Arcobacter nitrofigilis DSM 7299 9170195 YP_003654239.1 CDS Arnit_0063 NC_014166.1 59203 59505 R KEGG: xau:Xaut_2910 hypothetical protein; SPTR: A7IJF4 Putative uncharacterized protein; hypothetical protein complement(59203..59505) Arcobacter nitrofigilis DSM 7299 9170196 YP_003654240.1 CDS Arnit_0064 NC_014166.1 59502 60749 R InterPro IPR000415; KEGG: cyc:PCC7424_2100 hypothetical protein; SPTR: B7KG56 Putative uncharacterized protein; PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain; hypothetical protein complement(59502..60749) Arcobacter nitrofigilis DSM 7299 9170197 YP_003654241.1 CDS Arnit_0065 NC_014166.1 60733 61185 R InterPro IPR020683:IPR002110; KEGG: ava:Ava_3944 ankyrin; PFAM: Ankyrin; SMART: Ankyrin; SPTR: A0YVD4 Putative uncharacterized protein; PFAM: Ankyrin repeat; ankyrin complement(60733..61185) Arcobacter nitrofigilis DSM 7299 9170198 YP_003654242.1 CDS Arnit_0066 NC_014166.1 61182 61703 R InterPro IPR012336:IPR012335; KEGG: hya:HY04AAS1_0035 redoxin domain protein; SPTR: B4U657 Redoxin domain protein; PFAM: AhpC/TSA family; hypothetical protein complement(61182..61703) Arcobacter nitrofigilis DSM 7299 9170199 YP_003654243.1 CDS Arnit_0067 NC_014166.1 61704 62081 R KEGG: bhy:BHWA1_00717 hypothetical protein; SPTR: C1QB54 Putative uncharacterized protein; hypothetical protein complement(61704..62081) Arcobacter nitrofigilis DSM 7299 9170200 YP_003654244.1 CDS Arnit_0068 NC_014166.1 62071 63366 R COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000318:IPR000510:IPR005975; KEGG: pca:Pcar_0314 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Q3A7S0 Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN complement(62071..63366) Arcobacter nitrofigilis DSM 7299 9170201 YP_003654245.1 CDS Arnit_0069 NC_014166.1 63525 63947 D KEGG: abu:Abu_1394 hypothetical protein; SPTR: A8EUM5 Putative uncharacterized protein; hypothetical protein 63525..63947 Arcobacter nitrofigilis DSM 7299 9170202 YP_003654246.1 CDS Arnit_0070 NC_014166.1 63996 64241 D KEGG: mpe:MYPE7800 hypothetical protein; SPTR: Q8EUY8 Putative uncharacterized protein MYPE7800; hypothetical protein 63996..64241 Arcobacter nitrofigilis DSM 7299 9170203 YP_003654247.1 CDS Arnit_0071 NC_014166.1 64248 65270 R COGs: COG0628 permease; InterPro IPR002549; KEGG: abu:Abu_1751 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: A8EVM4 Conserved hypothetical transmembrane protein; PFAM: Domain of unknown function DUF20; hypothetical protein complement(64248..65270) Arcobacter nitrofigilis DSM 7299 9170204 YP_003654248.1 CDS Arnit_0072 NC_014166.1 65320 66825 R KEGG: conserved hypothetical protein; SPTR: Q8IEN8 Putative uncharacterized protein; hypothetical protein complement(65320..66825) Arcobacter nitrofigilis DSM 7299 9170205 YP_003654249.1 CDS Arnit_0073 NC_014166.1 66910 68250 R COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR020558:IPR000510; KEGG: pca:Pcar_0313 nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; SPTR: Q3A7S1 Nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; oxidoreductase/nitrogenase component 1 complement(66910..68250) Arcobacter nitrofigilis DSM 7299 9170206 YP_003654250.1 CDS Arnit_0074 NC_014166.1 68404 68790 D InterPro IPR003731; KEGG: sul:SYO3AOP1_1078 dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: C2A0P3 Uncharacterized conserved protein; PFAM: Dinitrogenase iron-molybdenum cofactor; dinitrogenase iron-molybdenum cofactor biosynthesis protein 68404..68790 Arcobacter nitrofigilis DSM 7299 9170207 YP_003654251.1 CDS Arnit_0075 NC_014166.1 68802 69773 D COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR011990:IPR006597:IPR001075; KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; nitrogen-fixing NifU domain protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: B3ESM2 Putative uncharacterized protein; PFAM: Sel1 repeat; NifU-like domain; Sel1 domain-containing protein repeat-containing protein 68802..69773 Arcobacter nitrofigilis DSM 7299 9170208 YP_003654252.1 CDS Arnit_0076 NC_014166.1 69770 70126 D InterPro IPR003731; KEGG: cyc:PCC7424_2114 nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: B7KG70 Nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX; dinitrogenase iron-molybdenum cofactor biosynthesis protein 69770..70126 Arcobacter nitrofigilis DSM 7299 9170209 YP_003654253.1 CDS Arnit_0077 NC_014166.1 70131 71369 D COGs: COG0426 flavoprotein; InterPro IPR016440:IPR008254; KEGG: dar:Daro_1451 beta-lactamase-like:flavodoxin/nitric oxide synthase; PFAM: flavodoxin/nitric oxide synthase; SPTR: Q47G31 Beta-lactamase-like:Flavodoxin/nitric oxide synthase; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin; flavodoxin/nitric oxide synthase 70131..71369 Arcobacter nitrofigilis DSM 7299 9170210 YP_003654254.1 CDS Arnit_0078 NC_014166.1 71433 71618 R KEGG: hwa:HQ2074A hypothetical protein; SPTR: Q18IH1 Putative uncharacterized protein; hypothetical protein complement(71433..71618) Arcobacter nitrofigilis DSM 7299 9170211 YP_003654255.1 CDS Arnit_0079 NC_014166.1 71615 71974 R InterPro IPR012336:IPR012335:IPR006660; KEGG: cyh:Cyan8802_1800 nitrogenase-associated protein; PFAM: arsenate reductase and related; SPTR: B7JWW9 Nitrogenase-associated protein; PFAM: ArsC family; TIGRFAM: nitrogenase-associated protein; arsenate reductase-like protein complement(71615..71974) Arcobacter nitrofigilis DSM 7299 9170212 YP_003654256.1 CDS Arnit_0080 NC_014166.1 72076 73524 D COGs: COG0535 Fe-S oxidoreductase; InterPro IPR003731:IPR000385:IPR007197:IPR005980; KEGG: lch:Lcho_1404 nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM domain protein; Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: B1Y745 Nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 72076..73524 Arcobacter nitrofigilis DSM 7299 9170213 YP_003654257.1 CDS Arnit_0081 NC_014166.1 73540 73821 D KEGG: hypothetical protein; SPTR: Q4YCC1 Putative uncharacterized protein (Fragment); hypothetical protein 73540..73821 Arcobacter nitrofigilis DSM 7299 9170214 YP_003654258.1 CDS Arnit_0082 NC_014166.1 73875 74990 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034:IPR013785:IPR000891:IPR013477; KEGG: wsu:WS1396 homocitrate sythase 1; PFAM: pyruvate carboxyltransferase; SPTR: Q7M8U7 HOMOCITRATE SYTHASE 1; TIGRFAM: homocitrate synthase; PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV; homocitrate synthase 73875..74990 Arcobacter nitrofigilis DSM 7299 9170215 YP_003654259.1 CDS Arnit_0083 NC_014166.1 74972 75778 D KEGG: ech:ECH_0024 glycyl-tRNA synthetase, beta subunit; SPTR: Q2GI76 Glycyl-tRNA synthetase, beta subunit; hypothetical protein 74972..75778 Arcobacter nitrofigilis DSM 7299 9170216 YP_003654260.1 CDS Arnit_0084 NC_014166.1 75802 76011 D KEGG: cpc:Cpar_1595 hypothetical protein; SPTR: B3QPZ0 Putative uncharacterized protein; hypothetical protein 75802..76011 Arcobacter nitrofigilis DSM 7299 9170217 YP_003654261.1 CDS Arnit_0085 NC_014166.1 76018 76260 D KEGG: wsu:WS1395 hypothetical protein; SPTR: Q7MRF6 Putative uncharacterized protein; hypothetical protein 76018..76260 Arcobacter nitrofigilis DSM 7299 9170218 YP_003654262.1 CDS Arnit_0086 NC_014166.1 76262 77254 D COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR003591:IPR001611; KEGG: ter:Tery_3798 small GTP-binding protein; PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; SPTR: Q10Y31 Small GTP-binding protein; PFAM: Leucine Rich Repeat; hypothetical protein 76262..77254 Arcobacter nitrofigilis DSM 7299 9170219 YP_003654263.1 CDS Arnit_0088 NC_014166.1 77612 78514 R COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR020103:IPR006224:IPR006145; KEGG: abu:Abu_0018 ribosomal large subunit pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: A8EQU7 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; pseudouridine synthase complement(77612..78514) Arcobacter nitrofigilis DSM 7299 9170221 YP_003654264.1 CDS Arnit_0089 NC_014166.1 78648 79976 D COGs: COG0015 Adenylosuccinate lyase; InterProIPR000362:IPR003031:IPR008948:IPR020557:IPR 019468:IPR004769; KEGG: abu:Abu_0019 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: A8EQU8 Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase 78648..79976 Arcobacter nitrofigilis DSM 7299 9170222 YP_003654265.1 CDS Arnit_0090 NC_014166.1 80006 82390 D InterProIPR000788:IPR008926:IPR005144:IPR013509:IPR 013346; KEGG: abu:Abu_0020 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: A8EQU9 Ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleoside-diphosphate reductase subunit alpha 80006..82390 Arcobacter nitrofigilis DSM 7299 9170223 YP_003654266.1 CDS Arnit_0091 NC_014166.1 82439 83458 D COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR009078:IPR012348:IPR000358; KEGG: abu:Abu_0021 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: A8EQR9 Ribonucleoside-diphosphate reductase, beta chain; PFAM: Ribonucleotide reductase, small chain; ribonucleoside-diphosphate reductase 82439..83458 Arcobacter nitrofigilis DSM 7299 9170224 YP_003654267.1 CDS Arnit_0092 NC_014166.1 83635 84354 D KEGG: rce:RC1_2412 hypothetical protein; SPTR: A8T108 Putative uncharacterized protein; hypothetical protein 83635..84354 Arcobacter nitrofigilis DSM 7299 9170225 YP_003654268.1 CDS Arnit_0093 NC_014166.1 84646 86388 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR011623; KEGG: tdn:Suden_1328 diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; SPTR: B6BNQ1 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: 7TM diverse intracellular signalling; GGDEF domain; 7TMR-DISM extracellular 2; TIGRFAM: diguanylate cyclase (GGDEF) domain; 7TM domain sensor diguanylate cyclase complement(84646..86388) Arcobacter nitrofigilis DSM 7299 9170226 YP_003654269.1 CDS Arnit_0094 NC_014166.1 86594 87043 D COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: abu:Abu_0023 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: A8EQS1 Putative uncharacterized protein; PFAM: Thioesterase superfamily; thioesterase superfamily protein 86594..87043 Arcobacter nitrofigilis DSM 7299 9170227 YP_003654270.1 CDS Arnit_0095 NC_014166.1 87054 87668 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: son:SO_1716 amino acid transporter LysE; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q8EG90 Transporter, LysE family; PFAM: LysE type translocator; lysine exporter protein complement(87054..87668) Arcobacter nitrofigilis DSM 7299 9170228 YP_003654271.1 CDS Arnit_0096 NC_014166.1 87669 88550 R InterPro IPR000620; KEGG: yen:YE3697 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: B9C9T6 Probable amino-acid metabolite efflux pump; PFAM: EamA-like transporter family; hypothetical protein complement(87669..88550) Arcobacter nitrofigilis DSM 7299 9170229 YP_003654272.1 CDS Arnit_0097 NC_014166.1 88689 89573 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR020449:IPR011256:IPR009057:IPR012287:IPR 018060:IPR000005:IPR010499; KEGG: abu:Abu_0178 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8ER81 Transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 88689..89573 Arcobacter nitrofigilis DSM 7299 9170230 YP_003654273.1 CDS Arnit_0098 NC_014166.1 89592 89972 D InterPro IPR004360; KEGG: abu:Abu_2072 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: A8EWG6 Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 89592..89972 Arcobacter nitrofigilis DSM 7299 9170231 YP_003654274.1 CDS Arnit_0099 NC_014166.1 89969 90451 R InterPro IPR009056; KEGG: sun:SUN_0504 hypothetical protein; SPTR: A6Q7K5 Putative uncharacterized protein; hypothetical protein complement(89969..90451) Arcobacter nitrofigilis DSM 7299 9170232 YP_003654275.1 CDS Arnit_0100 NC_014166.1 90635 91450 D COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: abu:Abu_0025 hypothetical protein; PFAM: OmpA/MotB domain protein; SPTR: A8EQS3 Putative uncharacterized protein; PFAM: OmpA family; OmpA/MotB domain-containing protein 90635..91450 Arcobacter nitrofigilis DSM 7299 9170233 YP_003654276.1 CDS Arnit_0101 NC_014166.1 91453 91842 D COGs: COG3743 conserved hypothetical protein; KEGG: abu:Abu_0026 hypothetical protein; SPTR: A8EQS4 Putative uncharacterized protein; hypothetical protein 91453..91842 Arcobacter nitrofigilis DSM 7299 9170234 YP_003654277.1 CDS Arnit_0102 NC_014166.1 91846 92289 R COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR000106:IPR017867; KEGG: abu:Abu_0594 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: A8ESD7 Protein tyrosine phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase complement(91846..92289) Arcobacter nitrofigilis DSM 7299 9170235 YP_003654278.1 CDS Arnit_0103 NC_014166.1 92291 93007 R COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: abu:Abu_1765 putative nitrilase/cyanide hydratase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: A8EVN8 Putative uncharacterized protein; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase complement(92291..93007) Arcobacter nitrofigilis DSM 7299 9170236 YP_003654279.1 CDS Arnit_0104 NC_014166.1 92982 94382 R COGs: COG1109 Phosphomannomutase; InterProIPR005841:IPR016055:IPR016066:IPR001579:IPR 005844:IPR005845:IPR005846:IPR005843; KEGG: sun:SUN_1934 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; PRIAM: Phosphomannomutase; SPTR: C1ZZL7 Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase complement(92982..94382) Arcobacter nitrofigilis DSM 7299 9170237 YP_003654280.1 CDS Arnit_0105 NC_014166.1 94492 95121 D COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: ppd:Ppro_1992 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A1AQI0 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; lysine exporter protein 94492..95121 Arcobacter nitrofigilis DSM 7299 9170238 YP_003654281.1 CDS Arnit_0108 NC_014166.1 96694 97359 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: tdn:Suden_0616 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BL93 Two component transcriptional regulator, winged helix family, putative; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(96694..97359) Arcobacter nitrofigilis DSM 7299 9170241 YP_003654282.1 CDS Arnit_0109 NC_014166.1 97473 99323 D COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR005467:IPR011623:IPR011495; KEGG: tcx:Tcr_1062 diguanylate cyclase; PFAM: Diverse 7TM receptor transmembrane region; histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SPTR: Q31GR6 Diguanylate cyclase (GGDEF domain); PFAM: Histidine kinase; 7TM diverse intracellular signalling; 7TMR-DISM extracellular 2; signal transduction histidine kinase 97473..99323 Arcobacter nitrofigilis DSM 7299 9170242 YP_003654283.1 CDS Arnit_0110 NC_014166.1 99343 100575 R COGs: COG0014 Gamma-glutamyl phosphate reductase; InterProIPR016161:IPR020593:IPR016162:IPR016163:IPR 012134:IPR000965; KEGG: abu:Abu_1757 gamma-glutamyl phosphate reductase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: A8EVN0 Gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(99343..100575) Arcobacter nitrofigilis DSM 7299 9170243 YP_003654284.1 CDS Arnit_0111 NC_014166.1 100632 102569 R COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR003660; KEGG: mgm:Mmc1_1821 adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SPTR: A0L8N6 Adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain; adenylate/guanylate cyclase complement(100632..102569) Arcobacter nitrofigilis DSM 7299 9170244 YP_003654285.1 CDS Arnit_0112 NC_014166.1 102610 103584 R COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR011032:IPR016040:IPR013154:IPR013149:IPR 014188; KEGG: pcr:Pcryo_1784 zinc-binding alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Q1Q9U2 Alcohol dehydrogenase, zinc-binding; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family; YhdH/YhfP family quinone oxidoreductase complement(102610..103584) Arcobacter nitrofigilis DSM 7299 9170245 YP_003654286.1 CDS Arnit_0113 NC_014166.1 103674 104954 R KEGG: sfr:Sfri_3895 hypothetical protein; SPTR: Q07W94 Putative uncharacterized protein; hypothetical protein complement(103674..104954) Arcobacter nitrofigilis DSM 7299 9170246 YP_003654287.1 CDS Arnit_0114 NC_014166.1 105064 105408 D COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abu:Abu_0028 hypothetical protein; PFAM: helix-turn-helix HxlR type; SPTR: A8EQS6 Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix; HxlR family transcriptional regulator 105064..105408 Arcobacter nitrofigilis DSM 7299 9170247 YP_003654288.1 CDS Arnit_0115 NC_014166.1 105410 106102 R COGs: COG0390 ABC-type uncharacterized transport system permease component; InterPro IPR005226; KEGG: kko:Kkor_0960 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: B6BLG4 ABC-type transport system, permease component; PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: conserved hypothetical protein TIGR00245; hypothetical protein complement(105410..106102) Arcobacter nitrofigilis DSM 7299 9170248 YP_003654289.1 CDS Arnit_0116 NC_014166.1 106104 106994 R COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterProIPR008927:IPR016040:IPR006168:IPR013328:IPR 011128:IPR006109; KEGG: abu:Abu_0029 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; PRIAM: Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); SPTR: A8EQS7 Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol-3-phosphate dehydrogenase complement(106104..106994) Arcobacter nitrofigilis DSM 7299 9170249 YP_003654290.1 CDS Arnit_0117 NC_014166.1 107146 107580 D InterPro IPR000835:IPR011991; KEGG: lwe:lwe2757 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A0AME3 Complete genome; PFAM: MarR family; MarR family transcriptional regulator 107146..107580 Arcobacter nitrofigilis DSM 7299 9170250 YP_003654291.1 CDS Arnit_0118 NC_014166.1 107621 109039 R COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterProIPR003789:IPR017958:IPR006075:IPR006107:IPR 018027:IPR004413; KEGG: abu:Abu_0030 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; SPTR: A8EQS8 Glutamyl-tRNA(Gln) amidotransferase, subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B complement(107621..109039) Arcobacter nitrofigilis DSM 7299 9170251 YP_003654292.1 CDS Arnit_0119 NC_014166.1 109049 109900 R InterPro IPR000215:IPR015391; KEGG: abu:Abu_0031 hypothetical protein; PFAM: SurA domain; SPTR: A8EQS9 Putative uncharacterized protein; PFAM: SurA N-terminal domain; SurA domain-containing protein complement(109049..109900) Arcobacter nitrofigilis DSM 7299 9170252 YP_003654293.1 CDS Arnit_0120 NC_014166.1 109976 112807 R COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR009051:IPR017900:IPR 016167:IPR012285:IPR017896:IPR006094:IPR004113:IPR001450; KEGG: abu:Abu_0032 oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein; PFAM: FAD linked oxidase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: A8EQR2 Oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; D-lactate dehydrogenase complement(109976..112807) Arcobacter nitrofigilis DSM 7299 9170253 YP_003654294.1 CDS Arnit_0121 NC_014166.1 112858 112971 R hypothetical protein complement(112858..112971) Arcobacter nitrofigilis DSM 7299 9170254 YP_003654295.1 CDS Arnit_0122 NC_014166.1 112984 114345 R COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: pin:Ping_3148 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A1SZC1 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(112984..114345) Arcobacter nitrofigilis DSM 7299 9170255 YP_003654296.1 CDS Arnit_0123 NC_014166.1 114342 114950 R COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: pin:Ping_3149 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: A1SZC2 Tripartite ATP-independent periplasmic transporter, DctQ component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ complement(114342..114950) Arcobacter nitrofigilis DSM 7299 9170256 YP_003654297.1 CDS Arnit_0124 NC_014166.1 115060 116133 R COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: pin:Ping_3150 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A1SZC3 TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; family 7 extracellular solute-binding protein complement(115060..116133) Arcobacter nitrofigilis DSM 7299 9170257 YP_003654298.1 CDS Arnit_0125 NC_014166.1 116228 116869 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR011006:IPR016032:IPR011991:IPR001789:IPR 001867; KEGG: abu:Abu_0034 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EQR4 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(116228..116869) Arcobacter nitrofigilis DSM 7299 9170258 YP_003654299.1 CDS Arnit_0126 NC_014166.1 116869 119067 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR000014:IPR005467:IPR 000700:IPR013656; KEGG: abu:Abu_0035 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: A8EQR5 Two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ABC transporter substrate binding protein; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor signal transduction histidine kinase complement(116869..119067) Arcobacter nitrofigilis DSM 7299 9170259 YP_003654300.1 CDS Arnit_0127 NC_014166.1 119086 119673 R COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: abu:Abu_0036 hypothetical protein; PFAM: protein of unknown function DUF162; SPTR: A8EQR6 Putative uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556; hypothetical protein complement(119086..119673) Arcobacter nitrofigilis DSM 7299 9170260 YP_003654301.1 CDS Arnit_0128 NC_014166.1 119673 121037 R COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterProIPR009051:IPR017900:IPR012285:IPR017896:IPR 003741; KEGG: abu:Abu_0037 iron-sulfur cluster binding protein, putative; PFAM: protein of unknown function DUF162; SPTR: A8EQR7 Iron-sulfur cluster binding protein, putative; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: 2[4Fe-4S] protein, putative; hypothetical protein complement(119673..121037) Arcobacter nitrofigilis DSM 7299 9170261 YP_003654302.1 CDS Arnit_0129 NC_014166.1 121034 121777 R COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: abu:Abu_0038 Fe-S oxidoreductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A8EQR8 Fe-S oxidoreductase; PFAM: Cysteine-rich domain; hypothetical protein complement(121034..121777) Arcobacter nitrofigilis DSM 7299 9170262 YP_003654303.1 CDS Arnit_0130 NC_014166.1 121837 122406 R KEGG: tdn:Suden_0164 hypothetical protein; SPTR: C2A059 Putative uncharacterized protein; hypothetical protein complement(121837..122406) Arcobacter nitrofigilis DSM 7299 9170263 YP_003654304.1 CDS Arnit_0131 NC_014166.1 122407 122841 R COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR016193:IPR016192:IPR016473:IPR002125; KEGG: tdn:Suden_0147 CMP/dCMP deaminase, zinc-binding; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Q30UA3 CMP/dCMP deaminase, zinc-binding; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; CMP/dCMP deaminase protein complement(122407..122841) Arcobacter nitrofigilis DSM 7299 9170264 YP_003654305.1 CDS Arnit_0132 NC_014166.1 123035 123487 D COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249:IPR011053:IPR000089; KEGG: abu:Abu_0040 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: A8EQV1 Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein 123035..123487 Arcobacter nitrofigilis DSM 7299 9170265 YP_003654306.1 CDS Arnit_0133 NC_014166.1 123500 124852 D COGs: COG0439 Biotin carboxylase; InterProIPR011054:IPR016185:IPR005479:IPR013817:IPR 013816:IPR011761:IPR011764:IPR005481:IPR005482:IPR004549; KEGG: abu:Abu_0041 biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: A8EQV2 Acetyl CoA carboxylase, biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase biotin carboxylase 123500..124852 Arcobacter nitrofigilis DSM 7299 9170266 YP_003654307.1 CDS Arnit_0134 NC_014166.1 125045 126511 D COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR000629:IPR014001:IPR001650:IPR014021:IPR 014014:IPR011545; KEGG: abu:Abu_0042 DEAD-box ATP dependent DNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8EQV3 ATP-dependent RNA helicase, DEAD box family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase 125045..126511 Arcobacter nitrofigilis DSM 7299 9170267 YP_003654308.1 CDS Arnit_0135 NC_014166.1 126593 126733 R hypothetical protein complement(126593..126733) Arcobacter nitrofigilis DSM 7299 9170268 YP_003654309.1 CDS Arnit_0136 NC_014166.1 126973 128553 D COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: abu:Abu_0043 phosphate permease, putative; PFAM: phosphate transporter; SPTR: A8EQV4 Phosphate permease, putative; PFAM: Phosphate transporter family; phosphate transporter 126973..128553 Arcobacter nitrofigilis DSM 7299 9170269 YP_003654310.1 CDS Arnit_0137 NC_014166.1 128619 129536 D COGs: COG0679 permease; InterPro IPR004776; KEGG: nis:NIS_1317 hypothetical protein; PFAM: Auxin Efflux Carrier; SPTR: A6Q4L6 Putative uncharacterized protein; PFAM: Membrane transport protein; auxin efflux carrier 128619..129536 Arcobacter nitrofigilis DSM 7299 9170270 YP_003654311.1 CDS Arnit_0138 NC_014166.1 129538 131319 D COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR014729:IPR017932:IPR000583:IPR001962:IPR 006426; KEGG: abu:Abu_0045 asparagine synthetase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: A8EQV6 Asparagine synthetase (Glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 129538..131319 Arcobacter nitrofigilis DSM 7299 9170271 YP_003654312.1 CDS Arnit_0139 NC_014166.1 131330 131635 D KEGG: tdn:Suden_1937 hypothetical protein; SPTR: Q30P70 Putative uncharacterized protein; hypothetical protein 131330..131635 Arcobacter nitrofigilis DSM 7299 9170272 YP_003654313.1 CDS Arnit_0140 NC_014166.1 131759 132022 D KEGG: hypothetical protein; SPTR: Q231E8 Putative uncharacterized protein; hypothetical protein 131759..132022 Arcobacter nitrofigilis DSM 7299 9170273 YP_003654314.1 CDS Arnit_0141 NC_014166.1 132023 132763 R COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR009051:IPR001041:IPR006058:IPR017900:IPR 012675:IPR012285:IPR017896:IPR004489; KEGG: tdn:Suden_0038 succinate dehydrogenase/fumarate reductase iron-sulfur protein; PFAM: ferredoxin; SPTR: B6BH33 Fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(132023..132763) Arcobacter nitrofigilis DSM 7299 9170274 YP_003654315.1 CDS Arnit_0142 NC_014166.1 132760 134349 R COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR013027:IPR015939:IPR003953:IPR004112; KEGG: tdn:Suden_0037 succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: Q30UL3 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: domain; FAD binding domain; succinate dehydrogenase complement(132760..134349) Arcobacter nitrofigilis DSM 7299 9170275 YP_003654316.1 CDS Arnit_0143 NC_014166.1 134351 134770 R KEGG: abu:Abu_0046 hypothetical protein; SPTR: A8EQV7 Putative uncharacterized protein; hypothetical protein complement(134351..134770) Arcobacter nitrofigilis DSM 7299 9170276 YP_003654317.1 CDS Arnit_0144 NC_014166.1 134763 135692 R COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006140:IPR006139; KEGG: abu:Abu_0274 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: A8ERH5 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(134763..135692) Arcobacter nitrofigilis DSM 7299 9170277 YP_003654318.1 CDS Arnit_0145 NC_014166.1 135752 137170 R COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714; KEGG: abu:Abu_0047 PhoH family protein; PFAM: PhoH family protein; SPTR: A8EQV8 PhoH family protein; PFAM: PhoH-like protein; PhoH family protein complement(135752..137170) Arcobacter nitrofigilis DSM 7299 9170278 YP_003654319.1 CDS Arnit_0146 NC_014166.1 137160 137681 R COGs: COG1981 membrane protein; InterPro IPR005265:IPR014351; KEGG: abu:Abu_0048 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8EQV9 Conserved hypothetical integral membrane protein; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein complement(137160..137681) Arcobacter nitrofigilis DSM 7299 9170279 YP_003654320.1 CDS Arnit_0147 NC_014166.1 137682 138863 R COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593:IPR003959; KEGG: abu:Abu_0049 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A8EQW0 ATPase, AAA family protein; PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus; AAA ATPase complement(137682..138863) Arcobacter nitrofigilis DSM 7299 9170280 YP_003654321.1 CDS Arnit_0148 NC_014166.1 138856 139656 R COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterProIPR020103:IPR018496:IPR002942:IPR006145:IPR 000748; KEGG: abu:Abu_0050 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; SPTR: A8EQW1 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase family; RNA-binding S4 domain-containing protein complement(138856..139656) Arcobacter nitrofigilis DSM 7299 9170281 YP_003654322.1 CDS Arnit_0149 NC_014166.1 139662 140621 R COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR003016:IPR000644:IPR001347:IPR004800; KEGG: abu:Abu_0051 carbohydrate isomerase KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; PRIAM: Arabinose-5-phosphate isomerase; SMART: CBS domain containing protein; SPTR: A8EQW2 Carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; KpsF/GutQ family protein complement(139662..140621) Arcobacter nitrofigilis DSM 7299 9170282 YP_003654323.1 CDS Arnit_0150 NC_014166.1 140631 142565 R COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; InterPro IPR001587:IPR011108:IPR004613; KEGG: abu:Abu_0052 hypothetical protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: A8EQW3 Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; RNA-metabolising metallo-beta-lactamase complement(140631..142565) Arcobacter nitrofigilis DSM 7299 9170283 YP_003654324.1 CDS Arnit_0151 NC_014166.1 142537 143349 R COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR020596:IPR020598:IPR001737:IPR011530; KEGG: abu:Abu_0053 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: A8EQW4 Dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase complement(142537..143349) Arcobacter nitrofigilis DSM 7299 9170284 YP_003654325.1 CDS Arnit_0152 NC_014166.1 143424 144185 D COGs: COG0107 Imidazoleglycerol-phosphate synthase; InterPro IPR011060:IPR013785:IPR006062:IPR004651; KEGG: abu:Abu_0054 imidazole glycerol phosphate synthase subunit HisF; PFAM: histidine biosynthesis protein; SPTR: A8EQW5 Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; imidazoleglycerol phosphate synthase cyclase subunit 143424..144185 Arcobacter nitrofigilis DSM 7299 9170285 YP_003654326.1 CDS Arnit_0153 NC_014166.1 144187 144858 D KEGG: abu:Abu_0055 hypothetical protein; SPTR: A8EQW6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541); hypothetical protein 144187..144858 Arcobacter nitrofigilis DSM 7299 9170286 YP_003654327.1 CDS Arnit_0154 NC_014166.1 144855 145391 D InterPro IPR000845; KEGG: abu:Abu_0056 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: A8EQW7 Putative uncharacterized protein; PFAM: Phosphorylase superfamily; purine or other phosphorylase family 1 protein 144855..145391 Arcobacter nitrofigilis DSM 7299 9170287 YP_003654328.1 CDS Arnit_0155 NC_014166.1 145436 146503 D COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR006638:IPR004383:IPR007197; KEGG: abu:Abu_0057 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EQW8 Ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family; radical SAM enzyme, Cfr family 145436..146503 Arcobacter nitrofigilis DSM 7299 9170288 YP_003654329.1 CDS Arnit_0156 NC_014166.1 146592 148004 D COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR020060:IPR008925:IPR001412:IPR014729:IPR 020061:IPR020751:IPR020058:IPR004527; KEGG: abu:Abu_0058 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: A8EQW9 Glutamyl-tRNA synthetase 1; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 146592..148004 Arcobacter nitrofigilis DSM 7299 9170289 YP_003654330.1 CDS Arnit_0157 NC_014166.1 148079 148282 D InterPro IPR006121; KEGG: tdn:Suden_0772 heavy metal transport/detoxification protein; SPTR: Q30SI0 Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 148079..148282 Arcobacter nitrofigilis DSM 7299 9170290 YP_003654331.1 CDS Arnit_0158 NC_014166.1 148293 150473 D COGs: COG2217 Cation transport ATPase; InterProIPR001757:IPR001756:IPR006121:IPR018303:IPR 017969:IPR000150:IPR008250:IPR005834:IPR006403:IPR006416; KEGG: ccv:CCV52592_0531 copper-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: C6RIF9 Copper-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase 148293..150473 Arcobacter nitrofigilis DSM 7299 9170291 YP_003654332.1 CDS Arnit_0159 NC_014166.1 150504 151139 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: abu:Abu_0060 two-component response regulator; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; SPTR: A8EQX1 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 150504..151139 Arcobacter nitrofigilis DSM 7299 9170292 YP_003654333.1 CDS Arnit_0160 NC_014166.1 151195 152268 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR003661:IPR005467; KEGG: abu:Abu_0061 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EQX2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 151195..152268 Arcobacter nitrofigilis DSM 7299 9170293 YP_003654334.1 CDS Arnit_0161 NC_014166.1 152332 152715 D KEGG: abu:Abu_0062 hypothetical protein; SPTR: A8EQX3 Putative uncharacterized protein; hypothetical protein 152332..152715 Arcobacter nitrofigilis DSM 7299 9170294 YP_003654335.1 CDS Arnit_0162 NC_014166.1 152715 153911 D COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0063 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: A8EQX4 Putative uncharacterized protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein 152715..153911 Arcobacter nitrofigilis DSM 7299 9170295 YP_003654336.1 CDS Arnit_0163 NC_014166.1 153908 154891 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: abu:Abu_0064 cation efflux system, membrane fusion protein; SPTR: A8EQX5 Cation efflux system, membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter 153908..154891 Arcobacter nitrofigilis DSM 7299 9170296 YP_003654337.1 CDS Arnit_0164 NC_014166.1 154898 158017 D COGs: COG3696 Putative silver efflux pump; InterPro IPR001036:IPR004763; KEGG: abu:Abu_0065 heavy metal efflux pump; PFAM: acriflavin resistance protein; SPTR: A8EQX6 Heavy metal efflux pump; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); CzcA family heavy metal efflux pump 154898..158017 Arcobacter nitrofigilis DSM 7299 9170297 YP_003654338.1 CDS Arnit_0165 NC_014166.1 158091 158405 D KEGG: sfr:Sfri_2413 hypothetical protein; SPTR: Q080Q7 Putative uncharacterized protein; TIGRFAM: pentapeptide MXKDX repeat protein; hypothetical protein 158091..158405 Arcobacter nitrofigilis DSM 7299 9170298 YP_003654339.1 CDS Arnit_0166 NC_014166.1 158440 159795 R COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: gsu:GSU2653 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Q749T9 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; MATE efflux family protein complement(158440..159795) Arcobacter nitrofigilis DSM 7299 9170299 YP_003654340.1 CDS Arnit_0167 NC_014166.1 159820 161082 R COGs: COG0460 Homoserine dehydrogenase; InterProIPR016040:IPR019811:IPR016204:IPR005106:IPR 001342:IPR002912; KEGG: abu:Abu_0158 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; PRIAM: Homoserine dehydrogenase; SPTR: A8ER68 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain; homoserine dehydrogenase complement(159820..161082) Arcobacter nitrofigilis DSM 7299 9170300 YP_003654341.1 CDS Arnit_0168 NC_014166.1 161091 162299 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR015424:IPR015421:IPR004839; KEGG: abu:Abu_0157 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A8ER67 Aspartate aminotransferase, aminotransferase, classes I and II; PFAM: Aminotransferase class I and II; class I and II aminotransferase complement(161091..162299) Arcobacter nitrofigilis DSM 7299 9170301 YP_003654342.1 CDS Arnit_0169 NC_014166.1 162302 163123 R KEGG: abu:Abu_0156 hypothetical protein; SPTR: A8ER66 Putative uncharacterized protein; hypothetical protein complement(162302..163123) Arcobacter nitrofigilis DSM 7299 9170302 YP_003654343.1 CDS Arnit_0170 NC_014166.1 163141 163833 R COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: abu:Abu_0155 TrmH family tRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: A8ER65 tRNA methyltransferase, TrmH family; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; RNA methyltransferase complement(163141..163833) Arcobacter nitrofigilis DSM 7299 9170303 YP_003654344.1 CDS Arnit_0171 NC_014166.1 163913 164728 R COGs: COG0313 methyltransferase; InterPro IPR000878:IPR018063:IPR014777:IPR008189; KEGG: abu:Abu_0154 putative methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: A8ER64 Putative uncharacterized protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: conserved hypothetical protein TIGR00096; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase complement(163913..164728) Arcobacter nitrofigilis DSM 7299 9170304 YP_003654345.1 CDS Arnit_0172 NC_014166.1 164745 164945 R COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: abu:Abu_0153 50S ribosomal protein L31; PFAM: ribosomal protein L31; SPTR: A8ER63 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(164745..164945) Arcobacter nitrofigilis DSM 7299 9170305 YP_003654346.1 CDS Arnit_0173 NC_014166.1 165032 165910 R COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR002627:IPR018022; KEGG: abu:Abu_0152 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: A8ER62 tRNA Delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA); tRNA delta(2)-isopentenylpyrophosphate transferase complement(165032..165910) Arcobacter nitrofigilis DSM 7299 9170306 YP_003654347.1 CDS Arnit_0174 NC_014166.1 165924 167459 R COGs: COG0388 amidohydrolase; InterPro IPR003010:IPR016181:IPR000463:IPR000182; KEGG: cts:Ctha_0190 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N-acetyltransferase; SPTR: B3QT18 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase complement(165924..167459) Arcobacter nitrofigilis DSM 7299 9170307 YP_003654348.1 CDS Arnit_0175 NC_014166.1 167574 168434 D COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR006371; KEGG: abu:Abu_0150 prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: A8ER60 4-hydroxybenzoate octaprenyltranferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 167574..168434 Arcobacter nitrofigilis DSM 7299 9170308 YP_003654349.1 CDS Arnit_0176 NC_014166.1 169025 169261 D KEGG: abu:Abu_1709 hypothetical protein; SPTR: B6GDZ7 Putative uncharacterized protein; hypothetical protein 169025..169261 Arcobacter nitrofigilis DSM 7299 9170310 YP_003654350.1 CDS Arnit_0177 NC_014166.1 169376 169903 D InterPro IPR010056; KEGG: apr:Apre_1793 phage replisome organizer; PFAM: replisome organizer putative region; SPTR: C7RI59 Phage replisome organizer; TIGRFAM: phage replisome organizer; PFAM: N-terminal phage replisome organiser (Phage_rep_org_N); TIGRFAM: phage replisome organizer, putative, N-terminal region; phage replisome organizer 169376..169903 Arcobacter nitrofigilis DSM 7299 9170311 YP_003654351.1 CDS Arnit_0178 NC_014166.1 169897 170196 D KEGG: DNAJ protein; SPTR: C5REK4 Lantibiotic dehydratase domain protein; chaperone DnaJ 169897..170196 Arcobacter nitrofigilis DSM 7299 9170312 YP_003654352.1 CDS Arnit_0179 NC_014166.1 170186 171229 D InterPro IPR007688; KEGG: wsu:WS1098 hypothetical protein; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; SPTR: Q7MRR5 Putative uncharacterized protein; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; TrbL/VirB6 plasmid conjugal transfer protein 170186..171229 Arcobacter nitrofigilis DSM 7299 9170313 YP_003654353.1 CDS Arnit_0180 NC_014166.1 171502 173031 D KEGG: viral A-type inclusion protein; SPTR: A2F531 Viral A-type inclusion protein, putative; hypothetical protein 171502..173031 Arcobacter nitrofigilis DSM 7299 9170314 YP_003654354.1 CDS Arnit_0181 NC_014166.1 173051 173305 D KEGG: bcg:BCG9842_B0597 hypothetical protein; SPTR: Q817L2 Putative uncharacterized protein; hypothetical protein 173051..173305 Arcobacter nitrofigilis DSM 7299 9170315 YP_003654355.1 CDS Arnit_0182 NC_014166.1 173525 174385 D KEGG: hypothetical protein; SPTR: A0DR44 Chromosome undetermined scaffold_6, whole genome shotgun sequence; hypothetical protein 173525..174385 Arcobacter nitrofigilis DSM 7299 9170316 YP_003654356.1 CDS Arnit_0183 NC_014166.1 174457 174597 R KEGG: sbp:Sbal223_2179 hypothetical protein; SPTR: B8EES1 Putative uncharacterized protein; hypothetical protein complement(174457..174597) Arcobacter nitrofigilis DSM 7299 9170317 YP_003654357.1 CDS Arnit_0184 NC_014166.1 174754 175191 D InterPro IPR005182; KEGG: pin:Ping_2576 membrane-flanked domain-containing protein; PFAM: membrane-flanked domain; SPTR: A1SXT2 Membrane-flanked domain; PFAM: Bacterial membrane flanked domain; membrane-flanked domain-containing protein 174754..175191 Arcobacter nitrofigilis DSM 7299 9170318 YP_003654358.1 CDS Arnit_0185 NC_014166.1 175208 175789 D KEGG: pmi:PMT9312_0461 apocytochrome f; SPTR: B5RPZ7 Heat shock protein; hypothetical protein 175208..175789 Arcobacter nitrofigilis DSM 7299 9170319 YP_003654359.1 CDS Arnit_0186 NC_014166.1 175782 175997 D KEGG: hypothetical protein; SPTR: Q54TM4 Putative uncharacterized protein; hypothetical protein 175782..175997 Arcobacter nitrofigilis DSM 7299 9170320 YP_003654360.1 CDS Arnit_0187 NC_014166.1 176017 176124 D hypothetical protein 176017..176124 Arcobacter nitrofigilis DSM 7299 9170321 YP_003654361.1 CDS Arnit_0188 NC_014166.1 176223 176456 D KEGG: vha:VIBHAR_04938 hypothetical protein; SPTR: A6AK10 Putative uncharacterized protein; hypothetical protein 176223..176456 Arcobacter nitrofigilis DSM 7299 9170322 YP_003654362.1 CDS Arnit_0189 NC_014166.1 176681 177151 D KEGG: cbl:CLK_A0086 hypothetical protein; SPTR: B6SBW0 Putative uncharacterized protein; hypothetical protein 176681..177151 Arcobacter nitrofigilis DSM 7299 9170323 YP_003654363.1 CDS Arnit_0190 NC_014166.1 177163 177711 D COGs: COG2856 Zn peptidase; InterPro IPR010359; KEGG: rlt:Rleg2_3868 protein of unknown function DUF955; PFAM: protein of unknown function DUF955; SPTR: B5ZUD7 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF955); hypothetical protein 177163..177711 Arcobacter nitrofigilis DSM 7299 9170324 YP_003654364.1 CDS Arnit_0191 NC_014166.1 177698 178759 D KEGG: lbl:LBL_0729 hypothetical protein; SPTR: Q054F3 Putative uncharacterized protein; hypothetical protein 177698..178759 Arcobacter nitrofigilis DSM 7299 9170325 YP_003654365.1 CDS Arnit_0192 NC_014166.1 178740 179840 R COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR013762:IPR002104; KEGG: sun:SUN_2452 phage integrase family site specific recombinase; PFAM: integrase family protein; SPTR: A6QD27 Site-specific recombinase, phage integrase family; PFAM: Phage integrase family; integrase family protein complement(178740..179840) Arcobacter nitrofigilis DSM 7299 9170326 YP_003654366.1 CDS Arnit_0193 NC_014166.1 180301 180777 R KEGG: lbf:LBF_1603 sensor histidine kinase of a two component response regulator; SPTR: A8UEY5 Possible sensor protein; hypothetical protein complement(180301..180777) Arcobacter nitrofigilis DSM 7299 9170327 YP_003654367.1 CDS Arnit_0194 NC_014166.1 180919 181413 D KEGG: hypothetical protein; SPTR: A2G0B3 Putative uncharacterized protein; hypothetical protein 180919..181413 Arcobacter nitrofigilis DSM 7299 9170328 YP_003654368.1 CDS Arnit_0195 NC_014166.1 181501 182220 D KEGG: reh:H16_A0885 hypothetical protein; SPTR: B0G6Z4 Putative uncharacterized protein; PFAM: Sulfolobus plasmid regulatory protein; hypothetical protein 181501..182220 Arcobacter nitrofigilis DSM 7299 9170329 YP_003654369.1 CDS Arnit_0196 NC_014166.1 182227 183042 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR008271:IPR002290:IPR020635:IPR 000719:IPR017442; KEGG: drm:Dred_0786 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A4J2M1 Protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 182227..183042 Arcobacter nitrofigilis DSM 7299 9170330 YP_003654370.1 CDS Arnit_0197 NC_014166.1 183054 184235 D KEGG: reh:H16_A0883 hypothetical protein; SPTR: B0G6Z6 Putative uncharacterized protein; hypothetical protein 183054..184235 Arcobacter nitrofigilis DSM 7299 9170331 YP_003654371.1 CDS Arnit_0198 NC_014166.1 184238 184966 R COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: tpd:Teth39_1314 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: C6PE61 Protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C; protein serine/threonine phosphatase complement(184238..184966) Arcobacter nitrofigilis DSM 7299 9170332 YP_003654372.1 CDS Arnit_0200 NC_014166.1 186148 187242 D COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR017909:IPR018389:IPR006311; KEGG: tcx:Tcr_1416 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: Q31FR3 Tripartite ATP-independent periplasmic (TRAP-T) transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; family 7 extracellular solute-binding protein 186148..187242 Arcobacter nitrofigilis DSM 7299 9170334 YP_003654373.1 CDS Arnit_0201 NC_014166.1 187239 187751 D COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: tcx:Tcr_1415 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Q31FR4 Tripartite ATP-independent periplasmic (TRAP-T) transporter, DctQ subunit; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ 187239..187751 Arcobacter nitrofigilis DSM 7299 9170335 YP_003654374.1 CDS Arnit_0202 NC_014166.1 187755 189080 D COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: tcx:Tcr_1414 TRAP dicarboxylate transporter-DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q31FR5 Tripartite ATP-independent periplasmic (TRAP-T) transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 187755..189080 Arcobacter nitrofigilis DSM 7299 9170336 YP_003654375.1 CDS Arnit_0203 NC_014166.1 189133 190725 D COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: tcx:Tcr_1413 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Q31FR6 Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 189133..190725 Arcobacter nitrofigilis DSM 7299 9170337 YP_003654376.1 CDS Arnit_0204 NC_014166.1 190744 191550 D InterPro IPR002781; KEGG: tcx:Tcr_1412 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Q31FR7 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 190744..191550 Arcobacter nitrofigilis DSM 7299 9170338 YP_003654377.1 CDS Arnit_0205 NC_014166.1 191583 191684 R KEGG: abu:Abu_1173 hypothetical protein; SPTR: A8EU09 Putative uncharacterized protein; hypothetical protein complement(191583..191684) Arcobacter nitrofigilis DSM 7299 9170339 YP_003654378.1 CDS Arnit_0206 NC_014166.1 191704 191898 R KEGG: tko:TK0357 hypothetical protein; SPTR: Q5JCW8 Hypothetical membrane protein, conserved; hypothetical protein complement(191704..191898) Arcobacter nitrofigilis DSM 7299 9170340 YP_003654379.1 CDS Arnit_0207 NC_014166.1 191916 194171 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR009082:IPR000014:IPR 001610:IPR005467:IPR000700:IPR013767; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: A8EVB1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase complement(191916..194171) Arcobacter nitrofigilis DSM 7299 9170341 YP_003654380.1 CDS Arnit_0208 NC_014166.1 194175 195143 R COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: vvu:VV2_0872 ABC-type sugar transport system, periplasmic component; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: A4U487 ABC-type sugar transport system, periplasmic component; PFAM: family; periplasmic binding protein/LacI transcriptional regulator complement(194175..195143) Arcobacter nitrofigilis DSM 7299 9170342 YP_003654381.1 CDS Arnit_0209 NC_014166.1 195325 196113 D COGs: COG3769 hydrolase (HAD superfamily); InterPro IPR013200:IPR006379:IPR006381; KEGG: pcr:Pcryo_2501 HAD family hydrolase YedP; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: Q1Q7R2 HAD-superfamily hydrolase YedP; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase-related protein; mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; mannosyl-3-phosphoglycerate phosphatase; mannosyl-3-phosphoglycerate phosphatase family protein 195325..196113 Arcobacter nitrofigilis DSM 7299 9170343 YP_003654382.1 CDS Arnit_0210 NC_014166.1 196103 197416 D COGs: COG2379 Putative glycerate kinase; InterPro IPR007835; KEGG: pmx:PERMA_1579 putative hydroxypyruvate reductase; PFAM: MOFRL domain protein; PRIAM: Glycerate kinase; SPTR: C0QRQ0 Putative hydroxypyruvate reductase; PFAM: MOFRL family; glycerate kinase 196103..197416 Arcobacter nitrofigilis DSM 7299 9170344 YP_003654383.1 CDS Arnit_0211 NC_014166.1 197409 198620 D KEGG: pcr:Pcryo_2502 putative glycosyltransferase; SPTR: Q1Q7R1 Putative uncharacterized protein; putative glycosyltransferase 197409..198620 Arcobacter nitrofigilis DSM 7299 9170345 YP_003654384.1 CDS Arnit_0212 NC_014166.1 198617 200365 D COGs: COG0366 Glycosidase; InterProIPR017853:IPR013781:IPR006589:IPR016377:IPR 006047; KEGG: lmc:Lm4b_02813 sucrose phosphorylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: A6DP96 Sucrose phosphorylase; PFAM: Alpha amylase, catalytic domain; alpha amylase 198617..200365 Arcobacter nitrofigilis DSM 7299 9170346 YP_003654385.1 CDS Arnit_0213 NC_014166.1 200387 201238 D COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835:IPR005771; KEGG: abu:Abu_0839 UTP--glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: A8ET30 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 200387..201238 Arcobacter nitrofigilis DSM 7299 9170347 YP_003654386.1 CDS Arnit_0214 NC_014166.1 201240 202700 D COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase; InterPro IPR001282:IPR016040; KEGG: mmw:Mmwyl1_1038 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; PRIAM: Glucose-6-phosphate dehydrogenase; SPTR: A6VU40 Glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 201240..202700 Arcobacter nitrofigilis DSM 7299 9170348 YP_003654387.1 CDS Arnit_0215 NC_014166.1 202675 203385 D COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR005900; KEGG: saz:Sama_1811 6-phosphogluconolactonase; SPTR: A1S6L0 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; 6-phosphogluconolactonase 202675..203385 Arcobacter nitrofigilis DSM 7299 9170349 YP_003654388.1 CDS Arnit_0216 NC_014166.1 203382 205202 D COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558:IPR000581:IPR004786; KEGG: cjd:JJD26997_1271 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Phosphogluconate dehydratase; SPTR: A7H495 Phosphogluconate dehydratase; TIGRFAM: 6-phosphogluconate dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; 6-phosphogluconate dehydratase; 6-phosphogluconate dehydratase 203382..205202 Arcobacter nitrofigilis DSM 7299 9170350 YP_003654389.1 CDS Arnit_0217 NC_014166.1 205199 205822 D COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887:IPR013785; KEGG: hpa:HPAG1_1037 2-keto-3-deoxy-6-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; PRIAM: 2-dehydro-3-deoxy-phosphogluconate aldolase; SPTR: Q1CSG8 2-keto-3-deoxy-6-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 205199..205822 Arcobacter nitrofigilis DSM 7299 9170351 YP_003654390.1 CDS Arnit_0218 NC_014166.1 205835 207469 D COGs: COG0033 Phosphoglucomutase; InterProIPR016055:IPR016066:IPR005844:IPR005845:IPR 005846:IPR005843:IPR005852; KEGG: sun:SUN_1277 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: A6Q9S1 Phosphoglucomutase, alpha-D-glucose phosphate-specific; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; phosphoglucomutase, alpha-D-glucose phosphate-specific 205835..207469 Arcobacter nitrofigilis DSM 7299 9170352 YP_003654391.1 CDS Arnit_0219 NC_014166.1 207473 208681 D COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672; KEGG: tdn:Suden_1472 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: B6BKK2 Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; phosphoglucose isomerase 207473..208681 Arcobacter nitrofigilis DSM 7299 9170353 YP_003654392.1 CDS Arnit_0220 NC_014166.1 208760 209713 D COGs: COG3272 conserved hypothetical protein; InterPro IPR017087:IPR007553:IPR013560; KEGG: abu:Abu_0835 hypothetical protein; PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; SPTR: A8ET26 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722); hypothetical protein 208760..209713 Arcobacter nitrofigilis DSM 7299 9170354 YP_003654393.1 CDS Arnit_0221 NC_014166.1 209721 210185 D InterPro IPR007352; KEGG: tdn:Suden_1805 hypothetical protein; PFAM: protein of unknown function DUF420; SPTR: Q30PK2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF420); hypothetical protein 209721..210185 Arcobacter nitrofigilis DSM 7299 9170355 YP_003654394.1 CDS Arnit_0222 NC_014166.1 210225 210773 D COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013991:IPR013987:IPR013988; KEGG: tcx:Tcr_1109 PhnA protein; PFAM: PhnA protein; SMART: PhnA protein; SPTR: Q31GL9 PhnA protein; PFAM: PhnA protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PhnA protein 210225..210773 Arcobacter nitrofigilis DSM 7299 9170356 YP_003654395.1 CDS Arnit_0223 NC_014166.1 210804 211973 R COGs: COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase); InterProIPR016185:IPR011054:IPR013817:IPR013815:IPR 013816:IPR011761:IPR003135:IPR005862; KEGG: abu:Abu_0145 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; SPTR: A8ER56 Phosphoribosylglycinamide formyltransferase 2; TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-grasp domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 complement(210804..211973) Arcobacter nitrofigilis DSM 7299 9170357 YP_003654396.1 CDS Arnit_0224 NC_014166.1 211945 212715 R COGs: COG2992 Uncharacterized FlgJ-related protein; InterPro IPR013338:IPR002901; KEGG: nam:NAMH_0062 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; SPTR: A6DCY7 Putative periplasmic protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase complement(211945..212715) Arcobacter nitrofigilis DSM 7299 9170358 YP_003654397.1 CDS Arnit_0225 NC_014166.1 212724 213461 R COGs: COG0253 Diaminopimelate epimerase; InterPro IPR018510:IPR001653; KEGG: abu:Abu_0144 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; PRIAM: Diaminopimelate epimerase; SPTR: A8ER55 Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(212724..213461) Arcobacter nitrofigilis DSM 7299 9170359 YP_003654398.1 CDS Arnit_0226 NC_014166.1 213458 214048 R COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: abu:Abu_0143 dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: A8ER54 Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase complement(213458..214048) Arcobacter nitrofigilis DSM 7299 9170360 YP_003654399.1 CDS Arnit_0227 NC_014166.1 214110 214664 R COGs: COG0421 Spermidine synthase; InterPro IPR001045; KEGG: abu:Abu_0142 spermidine synthase; PFAM: Spermine synthase; SPTR: A8ER53 Spermidine synthase; PFAM: Spermine/spermidine synthase; spermine synthase complement(214110..214664) Arcobacter nitrofigilis DSM 7299 9170361 YP_003654400.1 CDS Arnit_0228 NC_014166.1 214769 215764 D COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR016188:IPR010918:IPR000728:IPR004733; KEGG: abu:Abu_0141 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: A8ER52 Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylformylglycinamidine cyclo-ligase 214769..215764 Arcobacter nitrofigilis DSM 7299 9170362 YP_003654401.1 CDS Arnit_0229 NC_014166.1 215823 216464 R InterPro IPR006622:IPR018967:IPR010693; KEGG: mbu:Mbur_2272 hypothetical protein; PFAM: Iron sulphur domain-containing, CDGSH-type; protein of unknown function DUF1271; SMART: zinc finger CDGSH-type domain protein; SPTR: Q12TU4 Zinc finger domain-containing protein; PFAM: Iron-binding zinc finger CDGSH type; Protein of unknown function (DUF1271); Iron sulfur domain-containing protein complement(215823..216464) Arcobacter nitrofigilis DSM 7299 9170363 YP_003654402.1 CDS Arnit_0230 NC_014166.1 216553 217329 R COGs: COG3384 conserved hypothetical protein; InterPro IPR004183:IPR014436; KEGG: abu:Abu_0138 LigB family protein; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: A8ER49 Putative uncharacterized protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B complement(216553..217329) Arcobacter nitrofigilis DSM 7299 9170364 YP_003654403.1 CDS Arnit_0231 NC_014166.1 217339 217779 R COGs: COG1846 Transcriptional regulators; InterPro IPR011991:IPR000835; KEGG: abu:Abu_0136 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A8ER47 Transcriptional regulator, MarR family; PFAM: MarR family; MarR family transcriptional regulator complement(217339..217779) Arcobacter nitrofigilis DSM 7299 9170365 YP_003654404.1 CDS Arnit_0232 NC_014166.1 217811 218515 R COGs: COG1741 Pirin-related protein; InterPro IPR011051:IPR012093:IPR003829; KEGG: abu:Abu_0139 pirin; PFAM: Pirin domain protein; SPTR: A8ER50 Pirin; PFAM: Pirin; Pirin domain-containing protein complement(217811..218515) Arcobacter nitrofigilis DSM 7299 9170366 YP_003654405.1 CDS Arnit_0233 NC_014166.1 218519 219022 R COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: abu:Abu_1537 putative FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: A8EV13 Putative FMN reductase; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(218519..219022) Arcobacter nitrofigilis DSM 7299 9170367 YP_003654406.1 CDS Arnit_0234 NC_014166.1 219119 219685 R COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: tdn:Suden_2032 YceI; PFAM: YceI family protein; SPTR: Q30NX5 YceI; PFAM: YceI-like domain; hypothetical protein complement(219119..219685) Arcobacter nitrofigilis DSM 7299 9170368 YP_003654407.1 CDS Arnit_0235 NC_014166.1 219899 220084 R KEGG: sml:Smlt3655 putative histone protein; SPTR: A6G958 Putative uncharacterized protein; putative histone protein complement(219899..220084) Arcobacter nitrofigilis DSM 7299 9170369 YP_003654408.1 CDS Arnit_0236 NC_014166.1 220282 221394 D COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR015424:IPR020578:IPR015421:IPR000192; KEGG: abu:Abu_0134 putative aminotransferase; PFAM: aminotransferase class V; SPTR: A8ER45 Putative aminotransferase; PFAM: Aminotransferase class-V; class V aminotransferase 220282..221394 Arcobacter nitrofigilis DSM 7299 9170370 YP_003654409.1 CDS Arnit_0237 NC_014166.1 221391 222236 D COGs: COG0124 Histidyl-tRNA synthetase; InterPro IPR002314; KEGG: abu:Abu_0133 ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II (G H P and S); SPTR: A8ER44 Putative uncharacterized protein; tRNA synthetase class II (G H P and S) 221391..222236 Arcobacter nitrofigilis DSM 7299 9170371 YP_003654410.1 CDS Arnit_0238 NC_014166.1 222241 223494 D COGs: COG0104 Adenylosuccinate synthase; InterPro IPR018220:IPR001114; KEGG: abu:Abu_0132 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: A8ER43 Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 222241..223494 Arcobacter nitrofigilis DSM 7299 9170372 YP_003654411.1 CDS Arnit_0239 NC_014166.1 223500 224051 D COGs: COG2952 conserved hypothetical protein; InterPro IPR007463; KEGG: abu:Abu_0131 hypothetical protein; PFAM: protein of unknown function DUF507; SPTR: A8ER42 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF507); hypothetical protein 223500..224051 Arcobacter nitrofigilis DSM 7299 9170373 YP_003654412.1 CDS Arnit_0240 NC_014166.1 224053 225171 D COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR001317:IPR011702:IPR002474:IPR017926:IPR 000991:IPR006274; KEGG: abu:Abu_0130 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: A8ER41 Carbamoylphosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 224053..225171 Arcobacter nitrofigilis DSM 7299 9170374 YP_003654413.1 CDS Arnit_0241 NC_014166.1 225236 225727 D InterPro IPR018490:IPR014710:IPR000595; KEGG: tye:THEYE_A0034 putative nucleotidyltransferase family; PFAM: cyclic nucleotide-binding; SPTR: C2CK26 Transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; putative Crp/Fnr family transcriptional regulator 225236..225727 Arcobacter nitrofigilis DSM 7299 9170375 YP_003654414.1 CDS Arnit_0242 NC_014166.1 225728 226198 R COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: abu:Abu_0128 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A; SPTR: A8ER39 Phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A complement(225728..226198) Arcobacter nitrofigilis DSM 7299 9170376 YP_003654415.1 CDS Arnit_0243 NC_014166.1 226198 227082 R InterPro IPR011006:IPR001789; KEGG: abu:Abu_0127 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ER38 Two-component response regulator; PFAM: Response regulator receiver domain; response regulator receiver protein complement(226198..227082) Arcobacter nitrofigilis DSM 7299 9170377 YP_003654416.1 CDS Arnit_0244 NC_014166.1 227079 228203 R COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR003526:IPR002363:IPR020555:IPR001228; KEGG: abu:Abu_0126 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; PRIAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase., 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: A8ER37 Bifunctional enzyme ispD/ispF; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(227079..228203) Arcobacter nitrofigilis DSM 7299 9170378 YP_003654417.1 CDS Arnit_0245 NC_014166.1 228293 229114 R COGs: COG1639 signal transduction protein; InterPro IPR013976; KEGG: abu:Abu_0734 hypothetical protein; PFAM: Metal-dependent hydrolase HDOD; SPTR: A8ESS5 Putative uncharacterized protein; PFAM: HDOD domain; putative signal transduction protein complement(228293..229114) Arcobacter nitrofigilis DSM 7299 9170379 YP_003654418.1 CDS Arnit_0246 NC_014166.1 229123 231567 R KEGG: hypothetical protein; SPTR: Q7RG16 Putative uncharacterized protein PY04535; PFAM: GGDEF domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; hypothetical protein complement(229123..231567) Arcobacter nitrofigilis DSM 7299 9170380 YP_003654419.1 CDS Arnit_0247 NC_014166.1 231704 233053 D COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: abu:Abu_0124 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: A8ER35 Thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 231704..233053 Arcobacter nitrofigilis DSM 7299 9170381 YP_003654420.1 CDS Arnit_0248 NC_014166.1 233064 233276 D KEGG: sun:SUN_0227 hypothetical protein; SPTR: A6Q6S8 Putative uncharacterized protein; hypothetical protein 233064..233276 Arcobacter nitrofigilis DSM 7299 9170382 YP_003654421.1 CDS Arnit_0249 NC_014166.1 233364 234479 D COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR002744:IPR019591; KEGG: abu:Abu_0123 ATP/GTP-binding protein; PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; SPTR: A8ER34 ATP/GTP-binding protein; PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; ParA/MinD-like ATPase 233364..234479 Arcobacter nitrofigilis DSM 7299 9170383 YP_003654422.1 CDS Arnit_0250 NC_014166.1 234624 235775 D COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterProIPR015424:IPR000209:IPR000277:IPR015421:IPR 015422; KEGG: abu:Abu_1723 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: Cystathionine gamma-lyase; SPTR: A8EVJ7 Cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme; cystathionine gamma-lyase 234624..235775 Arcobacter nitrofigilis DSM 7299 9170384 YP_003654423.1 CDS Arnit_0251 NC_014166.1 235776 237272 D COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR015424:IPR015421:IPR000277; KEGG: abu:Abu_1724 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: A8EVJ8 Cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme; Cys/Met metabolism pyridoxal-phosphate-dependent protein 235776..237272 Arcobacter nitrofigilis DSM 7299 9170385 YP_003654424.1 CDS Arnit_0252 NC_014166.1 237275 237622 D InterPro IPR011394; KEGG: abu:Abu_1402 hypothetical protein; SPTR: A8EUN3 Putative uncharacterized protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; hypothetical protein 237275..237622 Arcobacter nitrofigilis DSM 7299 9170386 YP_003654425.1 CDS Arnit_0253 NC_014166.1 243516 243614 D hypothetical protein 243516..243614 Arcobacter nitrofigilis DSM 7299 9170392 YP_003654426.1 CDS Arnit_0254 NC_014166.1 243618 244301 R COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496:IPR008179; KEGG: abu:Abu_0121 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; SPTR: A8ER32 Bifunctional phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP diphosphatase complement(243618..244301) Arcobacter nitrofigilis DSM 7299 9170393 YP_003654427.1 CDS Arnit_0255 NC_014166.1 244311 244616 R KEGG: major antigen; SPTR: Q6XYT3 Chromosome segregation ATPase; hypothetical protein complement(244311..244616) Arcobacter nitrofigilis DSM 7299 9170394 YP_003654428.1 CDS Arnit_0256 NC_014166.1 244659 245735 R COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR000163:IPR001107; KEGG: abu:Abu_0119 band 7 family protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: A8ER30 Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family; hypothetical protein complement(244659..245735) Arcobacter nitrofigilis DSM 7299 9170395 YP_003654429.1 CDS Arnit_0257 NC_014166.1 245843 246763 R COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544:IPR005785; KEGG: abu:Abu_0118 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; SPTR: A8ER29 Branched-chain amino-acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; branched-chain amino acid aminotransferase complement(245843..246763) Arcobacter nitrofigilis DSM 7299 9170396 YP_003654430.1 CDS Arnit_0258 NC_014166.1 246915 247523 D InterPro IPR015985; KEGG: amr:AM1_5706 hypothetical protein; PFAM: Tellurite resistance methyltransferase, TehB, core; SPTR: C2A021 Putative uncharacterized protein; PFAM: Tellurite resistance protein TehB; tellurite resistance methyltransferase, TehB, core 246915..247523 Arcobacter nitrofigilis DSM 7299 9170397 YP_003654431.1 CDS Arnit_0259 NC_014166.1 247599 251072 D COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR003726:IPR011005:IPR004223:IPR006158:IPR 003759:IPR000489:IPR011822; KEGG: abu:Abu_0117 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; SPTR: A8ER28 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: methionine synthase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase 247599..251072 Arcobacter nitrofigilis DSM 7299 9170398 YP_003654432.1 CDS Arnit_0260 NC_014166.1 251262 252113 D InterPro IPR000620; KEGG: cff:CFF8240_0754 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A4BKK0 Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 251262..252113 Arcobacter nitrofigilis DSM 7299 9170399 YP_003654433.1 CDS Arnit_0261 NC_014166.1 252087 252695 R COGs: COG3647 membrane protein; InterPro IPR014509; KEGG: sun:SUN_1160 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q1YYD4 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2238); hypothetical protein complement(252087..252695) Arcobacter nitrofigilis DSM 7299 9170400 YP_003654434.1 CDS Arnit_0262 NC_014166.1 252707 253714 R COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746; KEGG: rbi:RB2501_11032 glutamine synthetase II; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: A2TUQ0 Glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; glutamate--ammonia ligase complement(252707..253714) Arcobacter nitrofigilis DSM 7299 9170401 YP_003654435.1 CDS Arnit_0263 NC_014166.1 253834 254646 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR009057:IPR018062:IPR012287:IPR018060:IPR 003313:IPR000005; KEGG: vfm:VFMJ11_1150 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; SPTR: A6DBM1 Transcriptional regulator, AraC family protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; AraC family transcriptional regulator 253834..254646 Arcobacter nitrofigilis DSM 7299 9170402 YP_003654436.1 CDS Arnit_0264 NC_014166.1 254698 255294 D COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: cps:CPS_3087 amino acid transporter LysE; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q47ZI5 Transporter, LysE family; PFAM: LysE type translocator; lysine exporter protein 254698..255294 Arcobacter nitrofigilis DSM 7299 9170403 YP_003654437.1 CDS Arnit_0265 NC_014166.1 255373 255852 D KEGG: abu:Abu_0115 hypothetical protein; SPTR: A8ER26 Putative uncharacterized protein; hypothetical protein 255373..255852 Arcobacter nitrofigilis DSM 7299 9170404 YP_003654438.1 CDS Arnit_0266 NC_014166.1 255858 256589 R COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: abu:Abu_0113 hypothetical protein; PFAM: protein of unknown function DUF752; SPTR: A8ER24 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF752); hypothetical protein complement(255858..256589) Arcobacter nitrofigilis DSM 7299 9170405 YP_003654439.1 CDS Arnit_0267 NC_014166.1 256632 257147 R COGs: COG1854 LuxS protein involved in autoinducer AI2 synthesis; InterPro IPR003815:IPR011249; KEGG: abu:Abu_0111 S-ribosylhomocysteinase; PFAM: LuxS protein; PRIAM: S-ribosylhomocysteine lyase; SPTR: A8ER22 S-ribosylhomocysteine lyase; PFAM: S-Ribosylhomocysteinase (LuxS); quorum-sensing autoinducer 2 (AI-2), LuxS complement(256632..257147) Arcobacter nitrofigilis DSM 7299 9170406 YP_003654440.1 CDS Arnit_0268 NC_014166.1 257220 257570 R KEGG: avn:Avin_48710 hypothetical protein; SPTR: C1DK66 Putative uncharacterized protein; hypothetical protein complement(257220..257570) Arcobacter nitrofigilis DSM 7299 9170407 YP_003654441.1 CDS Arnit_0269 NC_014166.1 257580 258158 R KEGG: hypothetical protein; SPTR: Q7RH94 Putative uncharacterized protein PY04095; hypothetical protein complement(257580..258158) Arcobacter nitrofigilis DSM 7299 9170408 YP_003654442.1 CDS Arnit_0270 NC_014166.1 258182 258883 R KEGG: hypothetical protein; SPTR: A7TQ63 Putative uncharacterized protein; hypothetical protein complement(258182..258883) Arcobacter nitrofigilis DSM 7299 9170409 YP_003654443.1 CDS Arnit_0271 NC_014166.1 258855 260081 R COGs: COG3864 conserved hypothetical protein; KEGG: sun:SUN_1504 hypothetical protein; SPTR: A6QAE6 Putative uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201); hypothetical protein complement(258855..260081) Arcobacter nitrofigilis DSM 7299 9170410 YP_003654444.1 CDS Arnit_0272 NC_014166.1 260062 261069 R COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: sun:SUN_1058 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_5; SPTR: A6Q956 Putative uncharacterized protein; PFAM: AAA domain (dynein-related subfamily); ATPase complement(260062..261069) Arcobacter nitrofigilis DSM 7299 9170411 YP_003654445.1 CDS Arnit_0273 NC_014166.1 261078 261266 R KEGG: cdf:CD1250 chromosome partition protein; SPTR: A6ESP5 Fructose-6-phosphate aldolase 2; chromosome partition protein complement(261078..261266) Arcobacter nitrofigilis DSM 7299 9170412 YP_003654446.1 CDS Arnit_0274 NC_014166.1 261281 261682 R InterPro IPR012827:IPR016131; KEGG: avn:Avin_01310 hemerythrin-like, metal binding protein; SPTR: B6BLR2 Hemerythrin HHE cation binding domain subfamily, putative; TIGRFAM: hemerythrin-like metal-binding protein; TIGRFAM: hemerythrin-like metal-binding domain; hemerythrin-like metal-binding protein complement(261281..261682) Arcobacter nitrofigilis DSM 7299 9170413 YP_003654447.1 CDS Arnit_0275 NC_014166.1 261756 262448 D COGs: COG1489 DNA-binding protein stimulates sugar fermentation; InterPro IPR005224; KEGG: gur:Gura_1121 sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; SPTR: A5GAS3 Sugar fermentation stimulation protein homolog; TIGRFAM: sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 261756..262448 Arcobacter nitrofigilis DSM 7299 9170414 YP_003654448.1 CDS Arnit_0276 NC_014166.1 262455 263519 R COGs: COG3180 Putative ammonia monooxygenase; InterPro IPR007820:IPR017516; KEGG: abu:Abu_0104 putative ammonia monooxygenase; PFAM: putative ammonia monooxygenase; SPTR: A8ER15 Putative uncharacterized protein; TIGRFAM: membrane protein AbrB duplication; PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; membrane protein AbrB complement(262455..263519) Arcobacter nitrofigilis DSM 7299 9170415 YP_003654449.1 CDS Arnit_0277 NC_014166.1 263506 264153 R COGs: COG0288 Carbonic anhydrase; InterPro IPR001765:IPR015892; KEGG: abu:Abu_0103 carbonic anhydrase; PFAM: carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: A8ER14 Carbonic anhydrase; PFAM: Carbonic anhydrase; carbonate dehydratase complement(263506..264153) Arcobacter nitrofigilis DSM 7299 9170416 YP_003654450.1 CDS Arnit_0278 NC_014166.1 264196 266367 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR004358:IPR003594:IPR005467:IPR000014; KEGG: abu:Abu_0102 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ER13 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; PAS domain S-box; multi-sensor signal transduction histidine kinase complement(264196..266367) Arcobacter nitrofigilis DSM 7299 9170417 YP_003654451.1 CDS Arnit_0279 NC_014166.1 266357 267037 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: abu:Abu_0101 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ER12 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(266357..267037) Arcobacter nitrofigilis DSM 7299 9170418 YP_003654452.1 CDS Arnit_0280 NC_014166.1 267067 268584 R COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: abu:Abu_0100 putative tricarboxylic transport protein TctA; PFAM: protein of unknown function DUF112 transmembrane; SPTR: A8ER11 Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctA family; hypothetical protein complement(267067..268584) Arcobacter nitrofigilis DSM 7299 9170419 YP_003654453.1 CDS Arnit_0281 NC_014166.1 268584 269066 R KEGG: abu:Abu_0099 putative tricarboxylic transport protein TctB; SPTR: A8ER10 Putative uncharacterized protein; putative tricarboxylic transport protein TctB complement(268584..269066) Arcobacter nitrofigilis DSM 7299 9170420 YP_003654454.1 CDS Arnit_0282 NC_014166.1 269108 270079 R COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: abu:Abu_0098 putative tricarboxylic transport protein TctC; PFAM: conserved hypothetical protein; SPTR: A8ER09 Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter family receptor; hypothetical protein complement(269108..270079) Arcobacter nitrofigilis DSM 7299 9170421 YP_003654455.1 CDS Arnit_0283 NC_014166.1 270930 271841 D COGs: COG4271 nucleotide-binding protein containing TIR -like domain; InterPro IPR014571:IPR019302; KEGG: vvu:VV1_2473 nucleotide-binding protein; PFAM: Nucleotide-binding protein, predicted, TIR-like; SPTR: A4CFM1 Predicted nucleotide-binding protein; PFAM: Predicted nucleotide-binding protein containing TIR-like domain; nucleotide-binding protein 270930..271841 Arcobacter nitrofigilis DSM 7299 9170422 YP_003654456.1 CDS Arnit_0284 NC_014166.1 271966 272922 R COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: tdn:Suden_0099 pyruvate flavodoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q30UF1 Pyruvate:acceptor oxidoreductase beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate domain-containing TPP-binding protein complement(271966..272922) Arcobacter nitrofigilis DSM 7299 9170423 YP_003654457.1 CDS Arnit_0285 NC_014166.1 272932 274161 R COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR009014:IPR015941:IPR002880; KEGG: sun:SUN_0200 pyruvate flavodoxin oxidoreductase subunit alpha; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: A6Q6Q1 Pyruvate:ferredoxin oxidoreductase, alpha subunit; PFAM: domain; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(272932..274161) Arcobacter nitrofigilis DSM 7299 9170424 YP_003654458.1 CDS Arnit_0286 NC_014166.1 274161 274574 R COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit; InterPro IPR017900:IPR017896:IPR001450:IPR011898; KEGG: nis:NIS_1604 pyruvate flavodoxin oxidoreductase subunit delta; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6Q5F1 Pyruvate:ferredoxin oxidoreductase, delta subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta complement(274161..274574) Arcobacter nitrofigilis DSM 7299 9170425 YP_003654459.1 CDS Arnit_0287 NC_014166.1 274585 275148 R COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR002869:IPR019752:IPR011894; KEGG: nis:NIS_1605 pyruvate flavodoxin oxidoreductase subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: A6Q5F2 Pyruvate:ferredoxin oxidoreductase, gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; pyruvate/ketoisovalerate oxidoreductase subunit gamma complement(274585..275148) Arcobacter nitrofigilis DSM 7299 9170426 YP_003654460.1 CDS Arnit_0288 NC_014166.1 275658 276314 R COGs: COG0546 phosphatase; InterPro IPR005834:IPR006439; KEGG: abu:Abu_0097 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8ER08 Putative uncharacterized protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase complement(275658..276314) Arcobacter nitrofigilis DSM 7299 9170427 YP_003654461.1 CDS Arnit_0289 NC_014166.1 276327 277844 R COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: abu:Abu_0096 oligopeptide ABC transporter, periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: A8ER07 Oligopeptide ABC transporter, periplasmic substrate-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; family 5 extracellular solute-binding protein complement(276327..277844) Arcobacter nitrofigilis DSM 7299 9170428 YP_003654462.1 CDS Arnit_0290 NC_014166.1 277932 278321 R COGs: COG0103 Ribosomal protein S9; InterPro IPR020568:IPR020574:IPR014721:IPR000754; KEGG: abu:Abu_0095 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: A8ER06 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 complement(277932..278321) Arcobacter nitrofigilis DSM 7299 9170429 YP_003654463.1 CDS Arnit_0291 NC_014166.1 278327 278746 R COGs: COG0102 Ribosomal protein L13; InterPro IPR005822:IPR005823; KEGG: abu:Abu_0094 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: A8ER05 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 complement(278327..278746) Arcobacter nitrofigilis DSM 7299 9170430 YP_003654464.1 CDS Arnit_0292 NC_014166.1 278823 280199 R COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003594:IPR009082:IPR003661:IPR005467; KEGG: abu:Abu_0093 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: A8ER04 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(278823..280199) Arcobacter nitrofigilis DSM 7299 9170431 YP_003654465.1 CDS Arnit_0293 NC_014166.1 280193 280867 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR011991:IPR001789:IPR001867; KEGG: abu:Abu_0092 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ER03 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(280193..280867) Arcobacter nitrofigilis DSM 7299 9170432 YP_003654466.1 CDS Arnit_0294 NC_014166.1 280872 281255 R KEGG: abu:Abu_0091 hypothetical protein; SPTR: A8ER02 Putative uncharacterized protein; hypothetical protein complement(280872..281255) Arcobacter nitrofigilis DSM 7299 9170433 YP_003654467.1 CDS Arnit_0295 NC_014166.1 281278 281949 R COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: abu:Abu_0090 phosphate transport system regulatory protein PhoU, putative; PFAM: PhoU family protein; SPTR: A8ER01 Phosphate transport system regulatory protein PhoU, putative; PFAM: PhoU domain; phosphate uptake regulator PhoU complement(281278..281949) Arcobacter nitrofigilis DSM 7299 9170434 YP_003654468.1 CDS Arnit_0296 NC_014166.1 282025 283755 R COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000160:IPR000644; KEGG: abu:Abu_0086 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A8EQZ7 EAL/GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(282025..283755) Arcobacter nitrofigilis DSM 7299 9170435 YP_003654469.1 CDS Arnit_0297 NC_014166.1 283953 285020 R COGs: COG0216 Protein chain release factor A; InterPro IPR000352:IPR005139:IPR004373; KEGG: abu:Abu_0083 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: A8EQZ4 Peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 complement(283953..285020) Arcobacter nitrofigilis DSM 7299 9170436 YP_003654470.1 CDS Arnit_0298 NC_014166.1 285085 285345 R InterPro IPR002583; KEGG: abu:Abu_0082 30S ribosomal protein S20; PFAM: ribosomal protein S20; SPTR: A8EQZ3 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 complement(285085..285345) Arcobacter nitrofigilis DSM 7299 9170437 YP_003654471.1 CDS Arnit_0299 NC_014166.1 285436 286770 D COGs: COG1109 Phosphomannomutase; InterProIPR005841:IPR016055:IPR016066:IPR005844:IPR 005845:IPR005846:IPR005843:IPR006352; KEGG: abu:Abu_0081 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: A8EQZ2 Phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase 285436..286770 Arcobacter nitrofigilis DSM 7299 9170438 YP_003654472.1 CDS Arnit_0300 NC_014166.1 286767 287228 D COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: abu:Abu_0080 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: A8EQZ1 Lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase 286767..287228 Arcobacter nitrofigilis DSM 7299 9170439 YP_003654473.1 CDS Arnit_0301 NC_014166.1 287307 288575 D COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterProIPR001030:IPR018136:IPR015931:IPR015932:IPR 011826:IPR006251; KEGG: abu:Abu_0079 3-isopropylmalate dehydratase large subunit; PFAM: aconitate hydratase domain protein; SPTR: A8EQZ0 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein; homoaconitate hydratase family protein 287307..288575 Arcobacter nitrofigilis DSM 7299 9170440 YP_003654474.1 CDS Arnit_0302 NC_014166.1 288576 289154 D COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: abu:Abu_0078 molybdopterin-guanine dinucleotide biosynthesis protein; SPTR: A8EQY9 Molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein 288576..289154 Arcobacter nitrofigilis DSM 7299 9170441 YP_003654475.1 CDS Arnit_0303 NC_014166.1 289220 289579 R COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: abu:Abu_0074 50S ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: A8EQY5 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 complement(289220..289579) Arcobacter nitrofigilis DSM 7299 9170442 YP_003654476.1 CDS Arnit_0304 NC_014166.1 289681 289878 R InterPro IPR001706:IPR018265; KEGG: abu:Abu_0073 50S ribosomal protein L35; PFAM: ribosomal protein L35; SPTR: A8EQY4 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 complement(289681..289878) Arcobacter nitrofigilis DSM 7299 9170443 YP_003654477.1 CDS Arnit_0305 NC_014166.1 290022 290549 R COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR019813:IPR001288:IPR019815:IPR019814; KEGG: abu:Abu_0072 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; SPTR: A8EQY3 Translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor IF-3 complement(290022..290549) Arcobacter nitrofigilis DSM 7299 9170444 YP_003654478.1 CDS Arnit_0306 NC_014166.1 290546 292354 R COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR006195:IPR002320:IPR018158:IPR018163:IPR 004154:IPR012947:IPR002314; KEGG: abu:Abu_0071 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; Anticodon-binding domain protein; SPTR: A8EQY2 Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; threonyl-tRNA synthetase complement(290546..292354) Arcobacter nitrofigilis DSM 7299 9170445 YP_003654479.1 CDS Arnit_0307 NC_014166.1 292464 292976 D KEGG: abu:Abu_0070 hypothetical protein; SPTR: A8EQY1 Putative uncharacterized protein; hypothetical protein 292464..292976 Arcobacter nitrofigilis DSM 7299 9170446 YP_003654480.1 CDS Arnit_0308 NC_014166.1 292989 294317 D COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: abu:Abu_0067 fibronectin/fibrinogen-binding protein, putative; PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; SPTR: A8EQX8 Fibronectin/fibrinogen-binding protein, putative; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); hypothetical protein 292989..294317 Arcobacter nitrofigilis DSM 7299 9170447 YP_003654481.1 CDS Arnit_0309 NC_014166.1 294408 295166 D COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: abu:Abu_0160 CDP-diglyceride synthetase CdsA; PFAM: phosphatidate cytidylyltransferase; SPTR: A8ER70 Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family; phosphatidate cytidylyltransferase 294408..295166 Arcobacter nitrofigilis DSM 7299 9170448 YP_003654482.1 CDS Arnit_0310 NC_014166.1 295163 296230 D COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821:IPR016040:IPR013512:IPR013644; KEGG: abu:Abu_0161 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: A8ER71 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 295163..296230 Arcobacter nitrofigilis DSM 7299 9170449 YP_003654483.1 CDS Arnit_0311 NC_014166.1 296220 296504 D KEGG: abu:Abu_0162 hypothetical protein; SPTR: A8ER72 Putative uncharacterized protein; hypothetical protein 296220..296504 Arcobacter nitrofigilis DSM 7299 9170450 YP_003654484.1 CDS Arnit_0312 NC_014166.1 296501 296929 D InterPro IPR011460; KEGG: cja:CJA_0343 rhs repeat family; PFAM: protein of unknown function DUF1566; SPTR: B6BMA3 Conserved domain protein; PFAM: Protein of unknown function (DUF1566); TIGRFAM: Fibrobacter succinogenes major paralogous domain; hypothetical protein 296501..296929 Arcobacter nitrofigilis DSM 7299 9170451 YP_003654485.1 CDS Arnit_0313 NC_014166.1 296940 297497 D COGs: COG3545 esterase of the alpha/beta hydrolase fold; InterPro IPR010662; KEGG: abu:Abu_0163 hypothetical protein; PFAM: protein of unknown function DUF1234; SPTR: A8ER73 Putative uncharacterized protein; PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234); hypothetical protein 296940..297497 Arcobacter nitrofigilis DSM 7299 9170452 YP_003654486.1 CDS Arnit_0314 NC_014166.1 297494 298483 D COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR017860:IPR017861:IPR000905; KEGG: abu:Abu_0164 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: A8ER74 Probable O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: metalloendopeptidase, putative, glycoprotease family; metalloendopeptidaseily 297494..298483 Arcobacter nitrofigilis DSM 7299 9170453 YP_003654487.1 CDS Arnit_0315 NC_014166.1 298483 298812 D COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950:IPR017228; KEGG: abu:Abu_0165 hypothetical protein; PFAM: translation initiation factor SUI1; SPTR: A8ER75 Putative uncharacterized protein; PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; translation initiation factor SUI1 298483..298812 Arcobacter nitrofigilis DSM 7299 9170454 YP_003654488.1 CDS Arnit_0316 NC_014166.1 298824 300209 D COGs: COG0063 sugar kinase; InterPro IPR000631:IPR004443:IPR017953; KEGG: abu:Abu_0166 putative carbohydrate kinase; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; SPTR: A8ER76 Putative uncharacterized protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; carbohydrate kinase 298824..300209 Arcobacter nitrofigilis DSM 7299 9170455 YP_003654489.1 CDS Arnit_0317 NC_014166.1 300206 300517 D COGs: COG1324 conserved hypothetical protein involved in tolerance to divalent cations; InterPro IPR011322:IPR004323; KEGG: abu:Abu_0167 periplasmic protein; PFAM: CutA1 divalent ion tolerance protein; SPTR: A8ER77 Conserved hypothetical periplasmic protein; PFAM: CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 300206..300517 Arcobacter nitrofigilis DSM 7299 9170456 YP_003654490.1 CDS Arnit_0318 NC_014166.1 300514 301293 D COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; InterPro IPR008867:IPR013785; KEGG: abu:Abu_0168 thiazole synthase; PFAM: thiazole biosynthesis family protein; SPTR: A8ER78 Thiazole biosynthesis protein thiG; PFAM: Thiazole biosynthesis protein ThiG; thiazole biosynthesis family protein 300514..301293 Arcobacter nitrofigilis DSM 7299 9170457 YP_003654491.1 CDS Arnit_0319 NC_014166.1 301305 301610 R InterPro IPR008407; KEGG: dsa:Desal_2541 branched-chain amino acid transport; PFAM: branched-chain amino acid transport; SPTR: C6BY67 Branched-chain amino acid transport; PFAM: Branched-chain amino acid transport protein (AzlD); branched-chain amino acid transport complement(301305..301610) Arcobacter nitrofigilis DSM 7299 9170458 YP_003654492.1 CDS Arnit_0320 NC_014166.1 301603 302286 R COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: dde:Dde_3176 branched-chain amino acid permease (azaleucine resistance)-like; PFAM: AzlC family protein; SPTR: Q9AME3 Probable branched-chain amino acid transport protein AzlC; PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; AzlC family protein complement(301603..302286) Arcobacter nitrofigilis DSM 7299 9170459 YP_003654493.1 CDS Arnit_0321 NC_014166.1 302333 303160 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR018062:IPR009057:IPR003313:IPR 000005:IPR012287; KEGG: pjd:Pjdr2_4187 transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A6DBM1 Transcriptional regulator, AraC family protein; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(302333..303160) Arcobacter nitrofigilis DSM 7299 9170460 YP_003654494.1 CDS Arnit_0322 NC_014166.1 303963 304103 D KEGG: abu:Abu_1867 hypothetical protein; SPTR: B6BII5 Putative uncharacterized protein; hypothetical protein 303963..304103 Arcobacter nitrofigilis DSM 7299 9170466 YP_003654495.1 CDS Arnit_0323 NC_014166.1 304277 305131 R InterPro IPR000620; KEGG: swp:swp_4628 membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C0GVI2 Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein complement(304277..305131) Arcobacter nitrofigilis DSM 7299 9170467 YP_003654496.1 CDS Arnit_0324 NC_014166.1 305418 306353 D COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: yen:YE0801 ABC transporter, solute-binding component; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C4SG74 ABC transporter, solute-binding component; PFAM: Bacterial extracellular solute-binding proteins, family 3; family 3 extracellular solute-binding protein 305418..306353 Arcobacter nitrofigilis DSM 7299 9170468 YP_003654497.1 CDS Arnit_0325 NC_014166.1 306356 307309 D COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035:IPR000408:IPR005925:IPR005924; KEGG: bpy:Bphyt_6362 agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: A8TZY1 Agmatinase; TIGRFAM: agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; agmatinase 306356..307309 Arcobacter nitrofigilis DSM 7299 9170469 YP_003654498.1 CDS Arnit_0326 NC_014166.1 307303 307953 D COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: yen:YE0802 ABC transporter, inner-membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C4S0S8 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit 307303..307953 Arcobacter nitrofigilis DSM 7299 9170470 YP_003654499.1 CDS Arnit_0327 NC_014166.1 307966 308625 D COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: rlt:Rleg2_4635 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B5ZZV3 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit 307966..308625 Arcobacter nitrofigilis DSM 7299 9170471 YP_003654500.1 CDS Arnit_0328 NC_014166.1 308647 309444 D COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: bph:Bphy_5107 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B2JLW6 ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein 308647..309444 Arcobacter nitrofigilis DSM 7299 9170472 YP_003654501.1 CDS Arnit_0329 NC_014166.1 309671 310549 D COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: abu:Abu_1053 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1ZY52 Transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; LysR family transcriptional regulator 309671..310549 Arcobacter nitrofigilis DSM 7299 9170473 YP_003654502.1 CDS Arnit_0330 NC_014166.1 310585 312456 R COGs: COG3920 Signal transduction histidine kinase; InterPro IPR005467:IPR003594:IPR011623:IPR011495; KEGG: tcx:Tcr_1062 diguanylate cyclase; PFAM: histidine kinase dimerisation/phosphoacceptor; Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; SPTR: Q31GR6 Diguanylate cyclase (GGDEF domain); PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; signal transduction histidine kinase complement(310585..312456) Arcobacter nitrofigilis DSM 7299 9170474 YP_003654503.1 CDS Arnit_0331 NC_014166.1 312540 312701 D KEGG: cyp:PCC8801_0428 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; SPTR: B6BL93 Two component transcriptional regulator, winged helix family, putative; response regulator receiver modulated diguanylate cyclase 312540..312701 Arcobacter nitrofigilis DSM 7299 9170475 YP_003654504.1 CDS Arnit_0332 NC_014166.1 312785 313411 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_0722 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BL93 Two component transcriptional regulator, winged helix family, putative; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 312785..313411 Arcobacter nitrofigilis DSM 7299 9170476 YP_003654505.1 CDS Arnit_0333 NC_014166.1 313541 313900 R KEGG: abu:Abu_1720 hypothetical protein; SPTR: A8EVJ4 Putative uncharacterized protein; hypothetical protein complement(313541..313900) Arcobacter nitrofigilis DSM 7299 9170477 YP_003654506.1 CDS Arnit_0334 NC_014166.1 314155 315360 D COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterProIPR003439:IPR017871:IPR005892:IPR003593:IPR 000644; KEGG: pmr:PMI0412 glycine betaine/L-proline ABC transporter, ATP-binding protein; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; SPTR: B4EUZ3 Glycine betaine/L-proline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; glycine betaine/L-proline ABC transporter ATPase 314155..315360 Arcobacter nitrofigilis DSM 7299 9170478 YP_003654507.1 CDS Arnit_0335 NC_014166.1 315353 316378 D COGs: COG4176 ABC-type proline/glycine betaine transport system permease component; InterPro IPR000515; KEGG: pmr:PMI0411 glycine betaine transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B4EUZ2 Glycine betaine/L-proline ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component 315353..316378 Arcobacter nitrofigilis DSM 7299 9170479 YP_003654508.1 CDS Arnit_0336 NC_014166.1 316375 317343 D COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: vex:VEA_003611 L-proline glycine betaine binding ABC transporter protein ProX/osmotic adaptation; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SPTR: Q1VDW6 ABC superfamily (Glycine/betaine/proline transport protein); PFAM: Substrate binding domain of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 316375..317343 Arcobacter nitrofigilis DSM 7299 9170480 YP_003654509.1 CDS Arnit_0337 NC_014166.1 317640 318416 D COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757:IPR000425; KEGG: bbr:BB0415 transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; SPTR: Q7WQB8 Probable transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; IclR family transcriptional regulator 317640..318416 Arcobacter nitrofigilis DSM 7299 9170482 YP_003654510.1 CDS Arnit_0338 NC_014166.1 318659 319630 D COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: bpt:Bpet3357 putative secreted protein; PFAM: conserved hypothetical protein; SPTR: A9HX25 Putative secreted protein; PFAM: Tripartite tricarboxylate transporter family receptor; hypothetical protein 318659..319630 Arcobacter nitrofigilis DSM 7299 9170483 YP_003654511.1 CDS Arnit_0339 NC_014166.1 319695 320168 D KEGG: fnu:FN2104 hypothetical protein; SPTR: A5TSC6 TTT family tricarboxylate transporter membrane protein; hypothetical protein 319695..320168 Arcobacter nitrofigilis DSM 7299 9170484 YP_003654512.1 CDS Arnit_0340 NC_014166.1 320168 321667 D COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: mes:Meso_1067 hypothetical protein; PFAM: protein of unknown function DUF112 transmembrane; SPTR: Q0FTV9 TRAP-T family transporter, fused small and large inner membrane subunits; PFAM: Tripartite tricarboxylate transporter TctA family; hypothetical protein 320168..321667 Arcobacter nitrofigilis DSM 7299 9170485 YP_003654513.1 CDS Arnit_0341 NC_014166.1 321671 322306 D COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: bpt:Bpet4448 putative dimethylmenaquinone methyltransferase family protein; PFAM: Dimethylmenaquinone methyltransferase; SPTR: A9IDC7 Putative dimethylmenaquinone methyltransferase family protein; PFAM: Demethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 321671..322306 Arcobacter nitrofigilis DSM 7299 9170486 YP_003654514.1 CDS Arnit_0342 NC_014166.1 322333 323616 D COGs: COG0520 Selenocysteine lyase; InterPro IPR015424:IPR000192:IPR015421; KEGG: vap:Vapar_3931 aminotransferase class V; PFAM: aminotransferase class V; SPTR: C5CVP2 Aminotransferase class V; PFAM: Aminotransferase class-V; class V aminotransferase 322333..323616 Arcobacter nitrofigilis DSM 7299 9170487 YP_003654515.1 CDS Arnit_0343 NC_014166.1 323626 323895 R COGs: COG1254 Acylphosphatase; InterPro IPR001792; KEGG: nam:NAMH_0944 acylphosphatase; PFAM: acylphosphatase; SPTR: B6BNZ9 Acylphosphatase; PFAM: Acylphosphatase; acylphosphatase complement(323626..323895) Arcobacter nitrofigilis DSM 7299 9170488 YP_003654516.1 CDS Arnit_0344 NC_014166.1 323958 324683 R COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: maq:Maqu_2297 carbon-phosphorus lyase complex accessory protein; SPTR: C2A2U5 Metal-dependent hydrolase, beta-lactamase superfamily I; PFAM: Metallo-beta-lactamase superfamily; carbon-phosphorus lyase complex accessory protein complement(323958..324683) Arcobacter nitrofigilis DSM 7299 9170489 YP_003654517.1 CDS Arnit_0345 NC_014166.1 324703 325377 R COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: B0AA47 Putative uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase complement(324703..325377) Arcobacter nitrofigilis DSM 7299 9170490 YP_003654518.1 CDS Arnit_0346 NC_014166.1 325361 325891 R COGs: COG3709 Uncharacterized component of phosphonate metabolism; InterPro IPR008144:IPR008145; KEGG: ara:Arad_0272 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; SPTR: B9J6P7 Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; PFAM: Guanylate kinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; guanylate kinase/L-type calcium channel region complement(325361..325891) Arcobacter nitrofigilis DSM 7299 9170491 YP_003654519.1 CDS Arnit_0347 NC_014166.1 325888 326526 R COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR018357:IPR017694:IPR011004:IPR001451; KEGG: dba:Dbac_0821 phosphonate metabolim protein, transferase hexapeptide repeat family; SPTR: B9QUX9 Phosphonate metabolim protein, transferase hexapeptide repeat family; TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; phosphonate metabolism protein complement(325888..326526) Arcobacter nitrofigilis DSM 7299 9170492 YP_003654520.1 CDS Arnit_0348 NC_014166.1 326526 327671 R COGs: COG3454 Metal-dependent hydrolase involved in phosphonate metabolism; InterPro IPR011059:IPR006680; KEGG: tcx:Tcr_2088 amidohydrolase-like; PFAM: amidohydrolase; SPTR: Q31DU6 Phosphonate metabolism protein; PFAM: Amidohydrolase family; TIGRFAM: phosphonate metabolism protein PhnM; amidohydrolase complement(326526..327671) Arcobacter nitrofigilis DSM 7299 9170493 YP_003654521.1 CDS Arnit_0349 NC_014166.1 327655 328359 R COGs: COG4778 ABC-type phosphonate transport system ATPase component; InterPro IPR003439:IPR017871:IPR012701:IPR003593; KEGG: pin:Ping_3687 ABC phosphonate transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6GN51 ABC transporter related protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL; phosphonate C-P lyase system protein PhnL complement(327655..328359) Arcobacter nitrofigilis DSM 7299 9170494 YP_003654522.1 CDS Arnit_0350 NC_014166.1 328369 329205 R COGs: COG4107 ABC-type phosphonate transport system ATPase component; InterProIPR003439:IPR017871:IPR012700:IPR003593:IPR 013563; KEGG: cdl:CDR20291_3369 phosphonate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Q181D3 Phosphonate ABC transporter, ATP-binding protein; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; ABC transporter-like protein complement(328369..329205) Arcobacter nitrofigilis DSM 7299 9170495 YP_003654523.1 CDS Arnit_0351 NC_014166.1 329205 330032 R COGs: COG3627 Uncharacterized protein of phosphonate metabolism; InterPro IPR010306; KEGG: cdl:CDR20291_3370 putative phosphonate metabolism protein; PFAM: phosphonate metabolism PhnJ; SPTR: Q181D5 Putative phosphonate metabolism protein; PFAM: Phosphonate metabolism protein PhnJ; phosphonate metabolism PhnJ complement(329205..330032) Arcobacter nitrofigilis DSM 7299 9170496 YP_003654524.1 CDS Arnit_0352 NC_014166.1 330029 331078 R COGs: COG3626 Uncharacterized protein of phosphonate metabolism; InterPro IPR008773; KEGG: tcx:Tcr_2084 phosphonate metabolism; PFAM: phosphonate metabolism; SPTR: Q31DV0 Phosphonate metabolism protein; PFAM: Bacterial phosphonate metabolism protein (PhnI); phosphonate metabolism protein complement(330029..331078) Arcobacter nitrofigilis DSM 7299 9170497 YP_003654525.1 CDS Arnit_0353 NC_014166.1 331078 331614 R COGs: COG3625 Uncharacterized protein of phosphonate metabolism; KEGG: cdf:CD3537 putative phosphonate metabolism protein; SPTR: Q181D8 Putative phosphonate metabolism protein; PFAM: Bacterial phosphonate metabolism protein (PhnH); TIGRFAM: phosphonate C-P lyase system protein PhnH; putative phosphonate metabolism protein complement(331078..331614) Arcobacter nitrofigilis DSM 7299 9170498 YP_003654526.1 CDS Arnit_0354 NC_014166.1 331618 332043 R KEGG: cdl:CDR20291_3373 putative phosphonate metabolism protein; SPTR: Q181D7 Putative phosphonate metabolism protein; PFAM: Phosphonate metabolism protein PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG; hypothetical protein complement(331618..332043) Arcobacter nitrofigilis DSM 7299 9170499 YP_003654527.1 CDS Arnit_0355 NC_014166.1 332045 332902 R COGs: COG3639 ABC-type phosphate/phosphonate transport system permease component; InterPro IPR000515:IPR005769; KEGG: dde:Dde_3326 phosphonate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q30W26 Phosphonate uptake transporter; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE; phosphonate ABC transporter inner membrane subunit complement(332045..332902) Arcobacter nitrofigilis DSM 7299 9170500 YP_003654528.1 CDS Arnit_0356 NC_014166.1 333011 333880 R COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR006311:IPR005770:IPR017797; KEGG: dde:Dde_3325 phosphonate-binding periplasmic protein; SPTR: Q30W27 Phosphonate-binding periplasmic protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; PFAM: NMT1/THI5 like; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein; Tat (twin-arginine translocation) pathway signal sequence; phosphonate ABC transporter periplasmic phosphonate binding protein complement(333011..333880) Arcobacter nitrofigilis DSM 7299 9170501 YP_003654529.1 CDS Arnit_0357 NC_014166.1 334043 334801 R COGs: COG3638 ABC-type phosphate/phosphonate transport system ATPase component; InterPro IPR003439:IPR012693:IPR017871:IPR003593; KEGG: lba:Lebu_0264 phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7NDM2 Phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein; ABC transporter-like protein complement(334043..334801) Arcobacter nitrofigilis DSM 7299 9170502 YP_003654530.1 CDS Arnit_0358 NC_014166.1 334798 335520 R COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: cpf:CPF_2963 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: B1RSY9 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; GntR family transcriptional regulator complement(334798..335520) Arcobacter nitrofigilis DSM 7299 9170503 YP_003654531.1 CDS Arnit_0359 NC_014166.1 335662 339924 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR001789:IPR000014:IPR000700:IPR 004358:IPR003594:IPR011006:IPR009082:IPR008207:IPR001610:I PR003661:IPR013767:IPR013656; KEGG: shl:Shal_0720 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; SPTR: B0TSX0 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 335662..339924 Arcobacter nitrofigilis DSM 7299 9170504 YP_003654532.1 CDS Arnit_0360 NC_014166.1 339927 340607 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: abu:Abu_1118 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BKU8 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 339927..340607 Arcobacter nitrofigilis DSM 7299 9170505 YP_003654533.1 CDS Arnit_0361 NC_014166.1 340682 341470 D COGs: COG3338 Carbonic anhydrase; InterPro IPR001148:IPR018338; KEGG: tdn:Suden_1236 carbonate dehydratase; PFAM: carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: B4W0E2 Eukaryotic-type carbonic anhydrase, putative; PFAM: Eukaryotic-type carbonic anhydrase; carbonate dehydratase 340682..341470 Arcobacter nitrofigilis DSM 7299 9170506 YP_003654534.1 CDS Arnit_0362 NC_014166.1 341480 343393 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_0789 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESY0 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 341480..343393 Arcobacter nitrofigilis DSM 7299 9170507 YP_003654535.1 CDS Arnit_0363 NC_014166.1 343524 344357 D COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005771:IPR005835; KEGG: abu:Abu_0839 UTP--glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: A8ET30 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 343524..344357 Arcobacter nitrofigilis DSM 7299 9170508 YP_003654536.1 CDS Arnit_0364 NC_014166.1 344359 345555 D COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672; KEGG: tdn:Suden_1472 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: B6BKK2 Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; phosphoglucose isomerase 344359..345555 Arcobacter nitrofigilis DSM 7299 9170509 YP_003654537.1 CDS Arnit_0365 NC_014166.1 345557 348328 D COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014021:IPR001650:IPR014001:IPR006935; KEGG: abu:Abu_0181 DNA/RNA helicase; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ER84 DNA/RNA helicase (DEAD/DEAH BOX family); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427); type III restriction protein res subunit 345557..348328 Arcobacter nitrofigilis DSM 7299 9170510 YP_003654538.1 CDS Arnit_0366 NC_014166.1 348334 349449 R COGs: COG1858 Cytochrome c peroxidase; InterPro IPR009056:IPR011031:IPR004852; KEGG: abu:Abu_1742 diheme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: A8EVL6 Diheme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase complement(348334..349449) Arcobacter nitrofigilis DSM 7299 9170511 YP_003654539.1 CDS Arnit_0367 NC_014166.1 349446 350351 R COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: abu:Abu_1743 sterol desaturase-related protein; PFAM: fatty acid hydroxylase; SPTR: A8EVL7 Sterol desaturase-related protein; PFAM: Fatty acid hydroxylase superfamily; fatty acid hydroxylase complement(349446..350351) Arcobacter nitrofigilis DSM 7299 9170512 YP_003654540.1 CDS Arnit_0368 NC_014166.1 350353 351240 R KEGG: abu:Abu_1744 hypothetical protein; SPTR: A8EVL8 Putative uncharacterized protein; PFAM: Imelysin; hypothetical protein complement(350353..351240) Arcobacter nitrofigilis DSM 7299 9170513 YP_003654541.1 CDS Arnit_0369 NC_014166.1 351240 352526 R COGs: COG3488 thiol oxidoreductase; InterPro IPR009056:IPR010538; KEGG: abu:Abu_1745 hypothetical protein; PFAM: protein of unknown function DUF1111; SPTR: A8EVL9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1111); hypothetical protein complement(351240..352526) Arcobacter nitrofigilis DSM 7299 9170514 YP_003654542.1 CDS Arnit_0370 NC_014166.1 352510 353865 R COGs: COG3487 Uncharacterized iron-regulated protein; InterPro IPR018976; KEGG: abu:Abu_1746 hypothetical protein; PFAM: Peptidase M75, Imelysin; SPTR: A8EVM0 Putative uncharacterized protein; PFAM: Imelysin; peptidase M75, Imelysin complement(352510..353865) Arcobacter nitrofigilis DSM 7299 9170515 YP_003654543.1 CDS Arnit_0371 NC_014166.1 353888 354052 R KEGG: si:dkey-274c14.3; SPTR: Q5EG54 Vitellogenin; hypothetical protein complement(353888..354052) Arcobacter nitrofigilis DSM 7299 9170516 YP_003654544.1 CDS Arnit_0372 NC_014166.1 354270 355457 D COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0706 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: A8ESP7 Conserved hypothetical membrane protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein 354270..355457 Arcobacter nitrofigilis DSM 7299 9170517 YP_003654545.1 CDS Arnit_0373 NC_014166.1 355463 356716 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: abu:Abu_0707 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: A8ESP8 HlyD family secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter 355463..356716 Arcobacter nitrofigilis DSM 7299 9170518 YP_003654546.1 CDS Arnit_0374 NC_014166.1 356709 357413 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: abu:Abu_0708 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ESP9 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 356709..357413 Arcobacter nitrofigilis DSM 7299 9170519 YP_003654547.1 CDS Arnit_0375 NC_014166.1 357413 358624 D COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR000630:IPR003838; KEGG: abu:Abu_0709 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: A8ESQ0 ABC transporter, permease protein; PFAM: Predicted permease; hypothetical protein 357413..358624 Arcobacter nitrofigilis DSM 7299 9170520 YP_003654548.1 CDS Arnit_0377 NC_014166.1 359004 360134 D COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: abu:Abu_0730 sulfite reductase, flavoprotein component; PFAM: PepSY-associated TM helix domain protein; SPTR: A8ESS1 Sulfite reductase, flavoprotein component; PFAM: PepSY-associated TM helix; PepSY-associated TM helix domain-containing protein 359004..360134 Arcobacter nitrofigilis DSM 7299 9170522 YP_003654549.1 CDS Arnit_0378 NC_014166.1 360204 361535 D COGs: COG0415 Deoxyribodipyrimidine photolyase; InterProIPR018394:IPR002081:IPR005101:IPR006050:IPR 014729; KEGG: abu:Abu_0834 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: A8ET25 Deoxyribodipyrimidine photolyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; deoxyribodipyrimidine photo-lyase 360204..361535 Arcobacter nitrofigilis DSM 7299 9170523 YP_003654550.1 CDS Arnit_0379 NC_014166.1 361522 362940 D COGs: COG1233 Phytoene dehydrogenase and related protein; KEGG: abu:Abu_0833 carotenoid isomerase, putative; SPTR: A8ET24 Carotenoid isomerase, putative; PFAM: Flavin containing amine oxidoreductase; carotenoid isomerase 361522..362940 Arcobacter nitrofigilis DSM 7299 9170524 YP_003654551.1 CDS Arnit_0380 NC_014166.1 362927 363916 D COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: abu:Abu_0832 two-component sensor histidine kinase; PFAM: histidine kinase internal region; SPTR: A8ET23 Two-component sensor histidine kinase; PFAM: Histidine kinase; signal transduction histidine kinase LytS 362927..363916 Arcobacter nitrofigilis DSM 7299 9170525 YP_003654552.1 CDS Arnit_0381 NC_014166.1 363913 364623 D COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492:IPR011006; KEGG: abu:Abu_0831 two-component response regulator; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; SPTR: A8ET22 Two-component response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain; LytTR family two component transcriptional regulator 363913..364623 Arcobacter nitrofigilis DSM 7299 9170526 YP_003654553.1 CDS Arnit_0382 NC_014166.1 364690 365223 D COGs: COG0386 Glutathione peroxidase; InterPro IPR000889:IPR012336:IPR012335; KEGG: hch:HCH_02304 glutathione peroxidase; PFAM: glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: C2A1D5 Glutathione peroxidase; PFAM: Glutathione peroxidase; peroxiredoxin 364690..365223 Arcobacter nitrofigilis DSM 7299 9170527 YP_003654554.1 CDS Arnit_0383 NC_014166.1 365220 365675 D COGs: COG4276 conserved hypothetical protein; KEGG: chu:CHU_1334 hypothetical protein; SPTR: B5JNV4 Putative uncharacterized protein; hypothetical protein 365220..365675 Arcobacter nitrofigilis DSM 7299 9170528 YP_003654555.1 CDS Arnit_0384 NC_014166.1 365672 366604 D COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: tdn:Suden_0918 ferrochelatase; PFAM: ferrochelatase; PRIAM: Ferrochelatase; SPTR: Q30S35 Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; ferrochelatase 365672..366604 Arcobacter nitrofigilis DSM 7299 9170529 YP_003654556.1 CDS Arnit_0385 NC_014166.1 366606 368141 R COGs: COG0661 unusual protein kinase; InterPro IPR000719:IPR011009:IPR004147; KEGG: tdn:Suden_0932 hypothetical protein; PFAM: ABC-1 domain protein; SPTR: Q30S21 ABC-1; PFAM: ABC1 family; ABC-1 domain-containing protein complement(366606..368141) Arcobacter nitrofigilis DSM 7299 9170530 YP_003654557.1 CDS Arnit_0386 NC_014166.1 368138 368401 R KEGG: abu:Abu_0829 hypothetical protein; SPTR: A8ET20 Putative uncharacterized protein; hypothetical protein complement(368138..368401) Arcobacter nitrofigilis DSM 7299 9170531 YP_003654558.1 CDS Arnit_0387 NC_014166.1 368482 369252 R COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: abu:Abu_1756 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: A8EVM9 Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase complement(368482..369252) Arcobacter nitrofigilis DSM 7299 9170532 YP_003654559.1 CDS Arnit_0388 NC_014166.1 369427 371997 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013163; KEGG: abu:Abu_1307 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EUE0 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer 369427..371997 Arcobacter nitrofigilis DSM 7299 9170533 YP_003654560.1 CDS Arnit_0389 NC_014166.1 372027 372383 R COGs: COG2138 conserved hypothetical protein; InterPro IPR002762; KEGG: abu:Abu_1192 hypothetical protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; SPTR: C0N2C2 Sirohydrochlorin cobaltochelatase; PFAM: CbiX; cobalamin (vitamin B12) biosynthesis protein CbiX complement(372027..372383) Arcobacter nitrofigilis DSM 7299 9170534 YP_003654561.1 CDS Arnit_0390 NC_014166.1 372414 373514 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: tdn:Suden_0968 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B6BNX1 Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein complement(372414..373514) Arcobacter nitrofigilis DSM 7299 9170535 YP_003654562.1 CDS Arnit_0391 NC_014166.1 373519 375741 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR000014:IPR000700:IPR004358:IPR 003594:IPR009082:IPR001610:IPR003661:IPR013655; KEGG: tdn:Suden_0966 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: B6BLE0 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase complement(373519..375741) Arcobacter nitrofigilis DSM 7299 9170536 YP_003654563.1 CDS Arnit_0392 NC_014166.1 376093 376725 R KEGG: sun:SUN_1324 hypothetical protein; SPTR: B6BN48 Putative uncharacterized protein; PFAM: Leucyl/phenylalanyl-tRNA protein transferase; hypothetical protein complement(376093..376725) Arcobacter nitrofigilis DSM 7299 9170539 YP_003654564.1 CDS Arnit_0393 NC_014166.1 376850 377689 R COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR001029; KEGG: abu:Abu_2254 flagellin; PFAM: flagellin domain protein; SPTR: A8BSL7 Flagellin A; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin domain-containing protein complement(376850..377689) Arcobacter nitrofigilis DSM 7299 9170540 YP_003654565.1 CDS Arnit_0394 NC_014166.1 378015 379013 D COGs: COG0585 conserved hypothetical protein; InterPro IPR011760:IPR020119:IPR020103:IPR001656; KEGG: abu:Abu_2117 tRNA pseudouridine synthase; PFAM: tRNA pseudouridine synthase D TruD; SPTR: A8EWK8 tRNA pseudouridine synthase; PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: conserved hypothetical protein TIGR00094; tRNA pseudouridine synthase D TruD 378015..379013 Arcobacter nitrofigilis DSM 7299 9170541 YP_003654566.1 CDS Arnit_0395 NC_014166.1 379002 381101 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR000014:IPR004358:IPR003594:IPR 009082:IPR003661; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EVB1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; multi-sensor signal transduction histidine kinase complement(379002..381101) Arcobacter nitrofigilis DSM 7299 9170542 YP_003654567.1 CDS Arnit_0396 NC_014166.1 381198 381506 R COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: hba:Hbal_2780 nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C6XQF4 Nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; Rieske (2Fe-2S) domain-containing protein complement(381198..381506) Arcobacter nitrofigilis DSM 7299 9170543 YP_003654568.1 CDS Arnit_0397 NC_014166.1 381508 383967 R COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR006066:IPR012744:IPR013027:IPR017121:IPR 005117:IPR007419:IPR006067; KEGG: hna:Hneap_1114 nitrite reductase (NAD(P)H), large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; SPTR: C0N4M3 Nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase (NAD(P)H) large subunit complement(381508..383967) Arcobacter nitrofigilis DSM 7299 9170544 YP_003654569.1 CDS Arnit_0398 NC_014166.1 384117 385838 R COGs: COG0631 Serine/threonine protein phosphatase; InterProIPR000719:IPR008266:IPR011009:IPR001932:IPR 020635:IPR002290:IPR014045:IPR017442; KEGG: dar:Daro_0820 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Protein phosphatase 2C-like; SMART: serine/threonine protein kinase; protein phosphatase 2C domain protein; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Q47HV5 Serine/threonine protein kinase; PFAM: Protein kinase domain; Protein phosphatase 2C; protein serine/threonine phosphatase complement(384117..385838) Arcobacter nitrofigilis DSM 7299 9170545 YP_003654570.1 CDS Arnit_0399 NC_014166.1 385866 386306 R COGs: COG1513 Cyanate lyase; InterPro IPR008076:IPR003712:IPR010982; KEGG: ttu:TERTU_4160 cyanase; PFAM: Cyanate lyase domain protein; PRIAM: Cyanase; SPTR: A4BAX9 Cyanate lyase; TIGRFAM: cyanate lyase; PFAM: Cyanate lyase C-terminal domain; TIGRFAM: cyanate hydratase; cyanate lyase complement(385866..386306) Arcobacter nitrofigilis DSM 7299 9170546 YP_003654571.1 CDS Arnit_0400 NC_014166.1 386360 387196 R COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: tdn:Suden_0716 formate/nitrite transporter; PFAM: formate/nitrite transporter; SPTR: Q30SN6 Formate/nitrite transporter; PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate/nitrite transporter complement(386360..387196) Arcobacter nitrofigilis DSM 7299 9170547 YP_003654572.1 CDS Arnit_0401 NC_014166.1 387392 388879 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR005467:IPR004358:IPR003594; KEGG: abu:Abu_0362 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERR3 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Protein of unknown function (DUF3365); histidine kinase 387392..388879 Arcobacter nitrofigilis DSM 7299 9170548 YP_003654573.1 CDS Arnit_0402 NC_014166.1 388876 389559 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: abu:Abu_0363 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1ZXM7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 388876..389559 Arcobacter nitrofigilis DSM 7299 9170549 YP_003654574.1 CDS Arnit_0403 NC_014166.1 389607 391601 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR009010:IPR006963:IPR006656:IPR006657; KEGG: dfe:Dfer_2062 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: A6DC81 Nitrate reductase narB; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; molybdopterin oxidoreductase complement(389607..391601) Arcobacter nitrofigilis DSM 7299 9170550 YP_003654575.1 CDS Arnit_0404 NC_014166.1 391764 393143 D COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR015168; KEGG: aeh:Mlg_1703 nitrate transporter; PFAM: NMT1/THI5 like domain protein; SPTR: B6BK92 Nitrate transporter; PFAM: NMT1/THI5 like; NMT1/THI5 like domain-containing protein 391764..393143 Arcobacter nitrofigilis DSM 7299 9170551 YP_003654576.1 CDS Arnit_0405 NC_014166.1 393250 394059 D COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515:IPR005889; KEGG: aeh:Mlg_1704 nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B6BK94 Nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; nitrate ABC transporter inner membrane subunit 393250..394059 Arcobacter nitrofigilis DSM 7299 9170552 YP_003654577.1 CDS Arnit_0406 NC_014166.1 394062 394856 D COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR017871:IPR005890:IPR003593; KEGG: vha:VIBHAR_05590 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B6BK95 Nitrate transporter system, ATPase component; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; nitrate ABC transporter ATPases C and D 394062..394856 Arcobacter nitrofigilis DSM 7299 9170553 YP_003654578.1 CDS Arnit_0407 NC_014166.1 394873 396801 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_1984 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8EW83 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; methyl-accepting chemotaxis sensory transducer 394873..396801 Arcobacter nitrofigilis DSM 7299 9170554 YP_003654579.1 CDS Arnit_0408 NC_014166.1 396813 397784 R InterPro IPR011044; KEGG: abu:Abu_2118 hypothetical protein; SPTR: A8EWK9 Putative uncharacterized protein; hypothetical protein complement(396813..397784) Arcobacter nitrofigilis DSM 7299 9170555 YP_003654580.1 CDS Arnit_0409 NC_014166.1 397794 398372 R KEGG: abu:Abu_2119 hypothetical protein; SPTR: A8EWL0 Putative uncharacterized protein; hypothetical protein complement(397794..398372) Arcobacter nitrofigilis DSM 7299 9170556 YP_003654581.1 CDS Arnit_0410 NC_014166.1 398481 399779 D COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR004447:IPR005151; KEGG: abu:Abu_2120 carboxyl-terminal protease family protein; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: A8EWL1 Carboxyl-terminal protease family protein; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); carboxyl-terminal protease 398481..399779 Arcobacter nitrofigilis DSM 7299 9170557 YP_003654582.1 CDS Arnit_0411 NC_014166.1 399804 400772 D COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR001636:IPR013816; KEGG: abu:Abu_2121 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; SPTR: A8EWL2 Phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; SAICAR synthetase 399804..400772 Arcobacter nitrofigilis DSM 7299 9170558 YP_003654583.1 CDS Arnit_0412 NC_014166.1 400854 401099 D COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component; InterPro IPR003850; KEGG: abu:Abu_2122 phosphoribosylformylglycinamidine synthetase; PFAM: phosphoribosylformylglycinamidine synthetase PurS; SPTR: A8EWL3 Phosphoribosylformylglycinamidine synthetase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein; phosphoribosylformylglycinamidine synthase PurS 400854..401099 Arcobacter nitrofigilis DSM 7299 9170559 YP_003654584.1 CDS Arnit_0413 NC_014166.1 401104 401778 D COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR017926:IPR010075:IPR011698; KEGG: abu:Abu_2123 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: A8EWL4 Phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I 401104..401778 Arcobacter nitrofigilis DSM 7299 9170560 YP_003654585.1 CDS Arnit_0414 NC_014166.1 401815 403014 D KEGG: abu:Abu_2124 hypothetical protein; SPTR: A8EWL5 Putative uncharacterized protein; hypothetical protein 401815..403014 Arcobacter nitrofigilis DSM 7299 9170561 YP_003654586.1 CDS Arnit_0415 NC_014166.1 402995 403684 D COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: abu:Abu_2125 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: A8EWL6 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase 402995..403684 Arcobacter nitrofigilis DSM 7299 9170562 YP_003654587.1 CDS Arnit_0416 NC_014166.1 403684 404070 D COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: abu:Abu_2126 camphor resistance CrcB protein; PFAM: Camphor resistance CrcB protein; SPTR: A8EWL7 Protein crcB homolog; PFAM: CrcB-like protein; TIGRFAM: crcB protein; camphor resistance CrcB protein 403684..404070 Arcobacter nitrofigilis DSM 7299 9170563 YP_003654588.1 CDS Arnit_0417 NC_014166.1 404148 404381 D InterPro IPR006312:IPR003369; KEGG: abu:Abu_2128 twin arginine-targeting protein translocase; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: A8EWL9 Twin-arginine translocation protein, TatA/E family; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; TatA/E family twin-arginine translocation protein 404148..404381 Arcobacter nitrofigilis DSM 7299 9170564 YP_003654589.1 CDS Arnit_0418 NC_014166.1 404392 405984 D COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR001412:IPR001278:IPR015945:IPR009080:IPR 005148:IPR008909:IPR014729; KEGG: abu:Abu_2129 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: A8EWM0 Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 404392..405984 Arcobacter nitrofigilis DSM 7299 9170565 YP_003654590.1 CDS Arnit_0419 NC_014166.1 405984 406100 D hypothetical protein 405984..406100 Arcobacter nitrofigilis DSM 7299 9170566 YP_003654591.1 CDS Arnit_0420 NC_014166.1 406102 406428 R COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: abu:Abu_2130 hypothetical protein; PFAM: Iojap-related protein; SPTR: A8EWM1 Putative uncharacterized protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein; iojap family protein complement(406102..406428) Arcobacter nitrofigilis DSM 7299 9170567 YP_003654592.1 CDS Arnit_0421 NC_014166.1 406442 406978 R COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR004821:IPR005248:IPR004820:IPR014729; KEGG: abu:Abu_2131 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: A8EWM2 Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(406442..406978) Arcobacter nitrofigilis DSM 7299 9170568 YP_003654593.1 CDS Arnit_0422 NC_014166.1 407069 408067 D COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020830:IPR006424:IPR020832:IPR020831:IPR 016040:IPR020828:IPR020829; KEGG: tdn:Suden_1754 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: B6BIF6 Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 407069..408067 Arcobacter nitrofigilis DSM 7299 9170569 YP_003654594.1 CDS Arnit_0423 NC_014166.1 408076 409272 D COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576:IPR015824:IPR015901; KEGG: abu:Abu_2133 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: A8EWM4 Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 408076..409272 Arcobacter nitrofigilis DSM 7299 9170570 YP_003654595.1 CDS Arnit_0424 NC_014166.1 409275 409979 D COGs: COG0149 Triosephosphate isomerase; InterPro IPR020861:IPR000652:IPR013785; KEGG: abu:Abu_2134 triosephosphate isomerase; PFAM: triosephosphate isomerase; SPTR: A8EWM5 Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 409275..409979 Arcobacter nitrofigilis DSM 7299 9170571 YP_003654596.1 CDS Arnit_0425 NC_014166.1 409981 410808 D COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002347:IPR016040:IPR002198; KEGG: abu:Abu_2135 enoyl-(acyl carrier protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8EWM6 Enoyl-(Acyl carrier protein) reductase; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 409981..410808 Arcobacter nitrofigilis DSM 7299 9170572 YP_003654597.1 CDS Arnit_0426 NC_014166.1 411018 412226 D COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183:IPR002986:IPR009006; KEGG: abu:Abu_2136 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: A8EWM7 Diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 411018..412226 Arcobacter nitrofigilis DSM 7299 9170573 YP_003654598.1 CDS Arnit_0427 NC_014166.1 412227 413006 D COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR006357; KEGG: nam:NAMH_1104 HAD-superfamily hydrolase, subfamily IIA; SPTR: C1ZYC3 Predicted sugar phosphatase of HAD superfamily; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily hydrolase 412227..413006 Arcobacter nitrofigilis DSM 7299 9170574 YP_003654599.1 CDS Arnit_0428 NC_014166.1 413003 414070 D COGs: COG0077 Prephenate dehydratase; InterProIPR002701:IPR001086:IPR010957:IPR008242:IPR 020822:IPR002912; KEGG: abu:Abu_2137 bifunctional chorismate mutase/prephenate dehydratase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein; SPTR: A8EWM8 Bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; monofunctional chorismate mutase, gram positive-type, clade 2; chorismate mutase 413003..414070 Arcobacter nitrofigilis DSM 7299 9170575 YP_003654600.1 CDS Arnit_0429 NC_014166.1 414085 415191 D COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR001917:IPR005861:IPR015424:IPR004839:IPR 015421; KEGG: abu:Abu_2138 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A8EWM9 Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 414085..415191 Arcobacter nitrofigilis DSM 7299 9170576 YP_003654601.1 CDS Arnit_0430 NC_014166.1 415205 417007 D COGs: COG1154 Deoxyxylulose-5-phosphate synthase; InterProIPR005474:IPR020826:IPR005477:IPR009014:IPR 005475:IPR005476:IPR015941; KEGG: abu:Abu_2139 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; SPTR: A8EWN0 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Dehydrogenase E1 component; Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase 415205..417007 Arcobacter nitrofigilis DSM 7299 9170577 YP_003654602.1 CDS Arnit_0431 NC_014166.1 417199 417357 D SPTR: C1I4U2 Glycosyl transferase; hypothetical protein 417199..417357 Arcobacter nitrofigilis DSM 7299 9170578 YP_003654603.1 CDS Arnit_0432 NC_014166.1 417598 418146 R COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: abu:Abu_2141 Maf-like protein; PFAM: Maf family protein; SPTR: A8EWN2 Septum formation protein Maf homolog; PFAM: Maf-like protein; TIGRFAM: MAF protein; Maf family protein complement(417598..418146) Arcobacter nitrofigilis DSM 7299 9170579 YP_003654604.1 CDS Arnit_0433 NC_014166.1 418186 419358 D COGs: COG2814 Arabinose efflux permease; InterPro IPR005829:IPR004812:IPR016196:IPR011701; KEGG: abu:Abu_2157 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1ZYY1 Drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; Bcr/CflA subfamily drug resistance transporter 418186..419358 Arcobacter nitrofigilis DSM 7299 9170580 YP_003654605.1 CDS Arnit_0434 NC_014166.1 419362 420255 D InterPro IPR000620; KEGG: ppd:Ppro_1999 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A1AQI7 Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 419362..420255 Arcobacter nitrofigilis DSM 7299 9170581 YP_003654606.1 CDS Arnit_0435 NC_014166.1 420245 421519 D KEGG: abu:Abu_2143 hypothetical protein; SPTR: A8EWN4 Putative uncharacterized protein; hypothetical protein 420245..421519 Arcobacter nitrofigilis DSM 7299 9170582 YP_003654607.1 CDS Arnit_0436 NC_014166.1 421592 422521 D COGs: COG0679 permease; InterPro IPR000215:IPR004776; KEGG: cps:CPS_0767 auxin efflux carrier family protein; PFAM: Auxin Efflux Carrier; SPTR: Q488J8 Auxin efflux carrier family protein; PFAM: Membrane transport protein; auxin efflux carrier 421592..422521 Arcobacter nitrofigilis DSM 7299 9170583 YP_003654608.1 CDS Arnit_0437 NC_014166.1 422518 423018 R COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: vsa:VSAL_I1387 putative lipoprotein; PFAM: NLP/P60 protein; SPTR: B6EKI6 Putative lipoprotein; PFAM: NlpC/P60 family; NLP/P60 protein complement(422518..423018) Arcobacter nitrofigilis DSM 7299 9170584 YP_003654609.1 CDS Arnit_0438 NC_014166.1 423076 423555 R KEGG: sun:SUN_0347 hypothetical protein; SPTR: A6Q748 Putative uncharacterized protein; hypothetical protein complement(423076..423555) Arcobacter nitrofigilis DSM 7299 9170585 YP_003654610.1 CDS Arnit_0439 NC_014166.1 423565 426117 R COGs: COG0013 Alanyl-tRNA synthetase; InterProIPR018165:IPR002318:IPR018164:IPR018162:IPR 018163:IPR012947:IPR003156; KEGG: abu:Abu_2092 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; PRIAM: Alanine--tRNA ligase; SPTR: A8EWI6 Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanyl-tRNA synthetase; alanyl-tRNA synthetase complement(423565..426117) Arcobacter nitrofigilis DSM 7299 9170586 YP_003654611.1 CDS Arnit_0440 NC_014166.1 426256 426573 D COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR017936:IPR017937:IPR005746:IPR006662:IPR 012336:IPR013766:IPR012335; KEGG: abu:Abu_2091 thioredoxin; PFAM: Thioredoxin domain; SPTR: A8EWI5 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 426256..426573 Arcobacter nitrofigilis DSM 7299 9170587 YP_003654612.1 CDS Arnit_0441 NC_014166.1 426773 427702 D COGs: COG0492 Thioredoxin reductase; InterProIPR008255:IPR005982:IPR000103:IPR013027:IPR 016040; KEGG: abu:Abu_2090 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8EWI4 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase 426773..427702 Arcobacter nitrofigilis DSM 7299 9170588 YP_003654613.1 CDS Arnit_0442 NC_014166.1 427859 429265 D COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: dsa:Desal_0910 anion transporter; PFAM: sodium/sulphate symporter; SPTR: C6BZR8 Anion transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; anion transporter 427859..429265 Arcobacter nitrofigilis DSM 7299 9170589 YP_003654614.1 CDS Arnit_0443 NC_014166.1 429283 431502 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR000014:IPR004358:IPR003594:IPR 013767; KEGG: wsu:WS0658 two component sensor kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: Q7M9U6 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: ABC transporter substrate binding protein; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase 429283..431502 Arcobacter nitrofigilis DSM 7299 9170590 YP_003654615.1 CDS Arnit_0444 NC_014166.1 431499 432155 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: wsu:WS0657 two component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C2A0S1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 431499..432155 Arcobacter nitrofigilis DSM 7299 9170591 YP_003654616.1 CDS Arnit_0445 NC_014166.1 432270 433760 R COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646:IPR004647:IPR011167; KEGG: abu:Abu_1928 fumarate hydratase, class I; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: A8EW27 Fumarate hydratase, class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; tartrate/fumarate subfamily hydro-lyase subunit alpha complement(432270..433760) Arcobacter nitrofigilis DSM 7299 9170592 YP_003654617.1 CDS Arnit_0446 NC_014166.1 433771 434496 R COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041:IPR017896:IPR006058:IPR017900:IPR 004489:IPR009051:IPR012675:IPR012285; KEGG: hhe:HH0687 fumarate reductase iron-sulfur subunit; PFAM: ferredoxin; SPTR: Q7VIC0 Fumarate reductase; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(433771..434496) Arcobacter nitrofigilis DSM 7299 9170593 YP_003654618.1 CDS Arnit_0447 NC_014166.1 434496 436478 R COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR003952:IPR014006:IPR015939:IPR003953:IPR 004112; KEGG: cff:CFF8240_0415 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase; SPTR: A0RN34 Fumarate reductase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunit complement(434496..436478) Arcobacter nitrofigilis DSM 7299 9170594 YP_003654619.1 CDS Arnit_0448 NC_014166.1 436489 437256 R InterPro IPR004224:IPR018956; KEGG: wsu:WS0832 fumarate reductase cytochrome b-556 subunit; PFAM: Fumarate reductase respiratory complex; SPTR: P17413 Fumarate reductase cytochrome b subunit; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; fumarate reductase respiratory complex protein complement(436489..437256) Arcobacter nitrofigilis DSM 7299 9170595 YP_003654620.1 CDS Arnit_0449 NC_014166.1 437557 438486 D COGs: COG0492 Thioredoxin reductase; InterProIPR008255:IPR005982:IPR000103:IPR013027:IPR 016040; KEGG: abu:Abu_2090 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8EWI4 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase 437557..438486 Arcobacter nitrofigilis DSM 7299 9170596 YP_003654621.1 CDS Arnit_0450 NC_014166.1 438493 439266 D COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR000846:IPR011770:IPR016040; KEGG: abu:Abu_2089 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: A8EWI3 Dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 438493..439266 Arcobacter nitrofigilis DSM 7299 9170597 YP_003654622.1 CDS Arnit_0451 NC_014166.1 439276 440625 D COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR017932:IPR005854:IPR000583:IPR000836; KEGG: abu:Abu_2088 amidophosphoribosyltransferase; PFAM: phosphoribosyltransferase; glutamine amidotransferase class-II; SPTR: A8EWI2 Amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase 439276..440625 Arcobacter nitrofigilis DSM 7299 9170598 YP_003654623.1 CDS Arnit_0452 NC_014166.1 440600 441601 D COGs: COG1242 Fe-S oxidoreductase; InterPro IPR005911:IPR006638:IPR007197; KEGG: abu:Abu_2087 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EWI1 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; hypothetical protein 440600..441601 Arcobacter nitrofigilis DSM 7299 9170599 YP_003654624.1 CDS Arnit_0453 NC_014166.1 441625 442524 R COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: abu:Abu_2086 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A8EWI0 Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator complement(441625..442524) Arcobacter nitrofigilis DSM 7299 9170600 YP_003654625.1 CDS Arnit_0454 NC_014166.1 442641 444695 D COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: abu:Abu_2085 ATP-dependent DNA helicase UvrD; PFAM: UvrD/REP helicase; SPTR: A8EWH9 ATP-dependent DNA helicase, UvrD/PcrA family; PFAM: UvrD/REP helicase; UvrD/REP helicase 442641..444695 Arcobacter nitrofigilis DSM 7299 9170601 YP_003654626.1 CDS Arnit_0455 NC_014166.1 444703 445551 D COGs: COG0130 Pseudouridine synthase; InterPro IPR000253:IPR014780:IPR020103:IPR002501; KEGG: abu:Abu_2084 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: A8EWH8 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B 444703..445551 Arcobacter nitrofigilis DSM 7299 9170602 YP_003654627.1 CDS Arnit_0456 NC_014166.1 445552 446328 D COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterPro IPR004424:IPR020568:IPR006204:IPR014721; KEGG: abu:Abu_2083 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; PRIAM: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; SPTR: A8EWH7 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 445552..446328 Arcobacter nitrofigilis DSM 7299 9170603 YP_003654628.1 CDS Arnit_0457 NC_014166.1 446321 446791 D COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: abu:Abu_2082 tmRNA-binding protein SmpB; PFAM: SmpB protein; SPTR: A8EWH6 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 446321..446791 Arcobacter nitrofigilis DSM 7299 9170604 YP_003654629.1 CDS Arnit_0458 NC_014166.1 446994 448460 D COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR004677; KEGG: abu:Abu_2081 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: A8EWH5 Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cbb3-type cytochrome c oxidase subunit I 446994..448460 Arcobacter nitrofigilis DSM 7299 9170605 YP_003654630.1 CDS Arnit_0459 NC_014166.1 448476 449159 D COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR009056:IPR003468; KEGG: abu:Abu_2080 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: A8EWH4 Cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cbb3-type cytochrome c oxidase subunit II 448476..449159 Arcobacter nitrofigilis DSM 7299 9170606 YP_003654631.1 CDS Arnit_0460 NC_014166.1 449169 449393 D InterPro IPR014107; KEGG: abu:Abu_2079 cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cytochrome c oxidase cbb3-type CcoQ; SPTR: A8EWH3 Cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cbb3-type cytochrome oxidase component FixQ; TIGRFAM: cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial; cbb3-type cytochrome c oxidase ccoQ 449169..449393 Arcobacter nitrofigilis DSM 7299 9170607 YP_003654632.1 CDS Arnit_0461 NC_014166.1 449395 450285 D InterPro IPR009056:IPR008168:IPR004678:IPR003088; KEGG: abu:Abu_2078 cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; SPTR: A8EWH2 Cytochrome c oxidase, cbb3-type, subunit III; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; cytochrome c class I 449395..450285 Arcobacter nitrofigilis DSM 7299 9170608 YP_003654633.1 CDS Arnit_0462 NC_014166.1 450287 450529 D KEGG: abu:Abu_2077 hypothetical protein; SPTR: A8EWH1 Putative uncharacterized protein; hypothetical protein 450287..450529 Arcobacter nitrofigilis DSM 7299 9170609 YP_003654634.1 CDS Arnit_0463 NC_014166.1 450540 450632 D KEGG: abu:Abu_2076 hypothetical protein; SPTR: A8EWH0 Putative uncharacterized protein; hypothetical protein 450540..450632 Arcobacter nitrofigilis DSM 7299 9170610 YP_003654635.1 CDS Arnit_0464 NC_014166.1 450633 451271 D KEGG: abu:Abu_2075 hypothetical protein; SPTR: A8EWG9 Putative uncharacterized protein; hypothetical protein 450633..451271 Arcobacter nitrofigilis DSM 7299 9170611 YP_003654636.1 CDS Arnit_0465 NC_014166.1 451279 451839 D KEGG: abu:Abu_2074 hypothetical protein; SPTR: A8EWG8 Putative uncharacterized protein; PFAM: FixH; hypothetical protein 451279..451839 Arcobacter nitrofigilis DSM 7299 9170612 YP_003654637.1 CDS Arnit_0466 NC_014166.1 451823 454183 D COGs: COG3893 Inactivated superfamily I helicase; InterPro IPR011604; KEGG: abu:Abu_2073 hypothetical protein; SPTR: A8EWG7 Putative uncharacterized protein; hypothetical protein 451823..454183 Arcobacter nitrofigilis DSM 7299 9170613 YP_003654638.1 CDS Arnit_0467 NC_014166.1 454208 455302 R COGs: COG1186 Protein chain release factor B; InterPro IPR000352:IPR004374:IPR005139; KEGG: abu:Abu_2071 peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: A8EWG5 Peptide chain release factor 2; TIGRFAM: peptide chain release factor 2; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 complement(454208..455302) Arcobacter nitrofigilis DSM 7299 9170614 YP_003654639.1 CDS Arnit_0468 NC_014166.1 455378 456004 R InterPro IPR009056; KEGG: abu:Abu_2070 hypothetical protein; SPTR: A8EWG4 Putative uncharacterized protein; hypothetical protein complement(455378..456004) Arcobacter nitrofigilis DSM 7299 9170615 YP_003654640.1 CDS Arnit_0469 NC_014166.1 456120 457313 R InterPro IPR008439:IPR005318; KEGG: abu:Abu_2032 major outer membrane protein; PFAM: major outer membrane protein; outer membrane porin; SPTR: A8EWC6 Major outer membrane protein; PFAM: Campylobacter major outer membrane protein; major outer membrane protein complement(456120..457313) Arcobacter nitrofigilis DSM 7299 9170616 YP_003654641.1 CDS Arnit_0470 NC_014166.1 457512 457823 R COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157; KEGG: abu:Abu_2033 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; SPTR: A8EWC7 Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; dihydroneopterin aldolase complement(457512..457823) Arcobacter nitrofigilis DSM 7299 9170617 YP_003654642.1 CDS Arnit_0471 NC_014166.1 457823 458443 R COGs: COG0344 membrane protein; InterPro IPR020788:IPR003811; KEGG: abu:Abu_2034 putative glycerol-3-phosphate acyltransferase PlsY; PFAM: protein of unknown function DUF205; SPTR: A8EWC8 UPF0078 membrane protein Abu_2034; PFAM: Domain of unknown function (DUF205); TIGRFAM: conserved hypothetical integral membrane protein TIGR00023; acyl-phosphate glycerol-3-phosphate acyltransferase complement(457823..458443) Arcobacter nitrofigilis DSM 7299 9170618 YP_003654643.1 CDS Arnit_0472 NC_014166.1 458546 459535 D COGs: COG0379 Quinolinate synthase; InterPro IPR003473; KEGG: abu:Abu_2035 quinolinate synthetase; PFAM: Quinolinate synthetase A; SPTR: A8EWC9 Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase complex subunit A 458546..459535 Arcobacter nitrofigilis DSM 7299 9170619 YP_003654644.1 CDS Arnit_0473 NC_014166.1 459532 460353 D COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR004393:IPR002638:IPR013785; KEGG: abu:Abu_2036 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: A8EWD0 Nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 459532..460353 Arcobacter nitrofigilis DSM 7299 9170620 YP_003654645.1 CDS Arnit_0474 NC_014166.1 460415 461395 D COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: abu:Abu_2037 exopolyphosphatase-related protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: A8EWD1 Exopolyphosphatase-related protein; PFAM: DHH family; DHHA1 domain; phosphoesterase RecJ domain-containing protein 460415..461395 Arcobacter nitrofigilis DSM 7299 9170621 YP_003654646.1 CDS Arnit_0475 NC_014166.1 461385 462755 D COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR016047; KEGG: abu:Abu_2038 M24/M37 family peptidase; PFAM: Peptidase M23; SPTR: A8EWD2 Peptidase, M23/M37 family; PFAM: Peptidase family M23; peptidase M23 461385..462755 Arcobacter nitrofigilis DSM 7299 9170622 YP_003654647.1 CDS Arnit_0476 NC_014166.1 462752 463660 D COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; InterPro IPR004463:IPR020568:IPR015870:IPR011334; KEGG: abu:Abu_2039 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; SPTR: A8EWD3 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase 462752..463660 Arcobacter nitrofigilis DSM 7299 9170623 YP_003654648.1 CDS Arnit_0477 NC_014166.1 463669 464121 D KEGG: abu:Abu_2040 hypothetical protein; SPTR: A8EWD4 Putative uncharacterized protein; hypothetical protein 463669..464121 Arcobacter nitrofigilis DSM 7299 9170624 YP_003654649.1 CDS Arnit_0478 NC_014166.1 464132 465013 D COGs: COG0083 Homoserine kinase; InterProIPR006203:IPR000870:IPR020568:IPR006204:IPR 013750:IPR014721; KEGG: abu:Abu_2041 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: Homoserine kinase; SPTR: A8EWD5 Homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase; homoserine kinase 464132..465013 Arcobacter nitrofigilis DSM 7299 9170625 YP_003654650.1 CDS Arnit_0479 NC_014166.1 465048 465314 D InterPro IPR007393; KEGG: abu:Abu_2042 hypothetical protein; PFAM: protein of unknown function DUF448; SPTR: A8EWD6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF448); hypothetical protein 465048..465314 Arcobacter nitrofigilis DSM 7299 9170626 YP_003654651.1 CDS Arnit_0480 NC_014166.1 465304 467970 D COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178:IPR005225:IPR009000:IPR009061:IPR 006847:IPR000795:IPR004161; KEGG: abu:Abu_2043 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; SPTR: A8EWD7 Translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor IF-2 465304..467970 Arcobacter nitrofigilis DSM 7299 9170627 YP_003654652.1 CDS Arnit_0481 NC_014166.1 467972 468328 D COGs: COG0858 Ribosome-binding factor A; InterPro IPR020053:IPR000238:IPR015946; KEGG: abu:Abu_2044 ribosome-binding factor A; SPTR: A8EWD8 Ribosome binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A 467972..468328 Arcobacter nitrofigilis DSM 7299 9170628 YP_003654653.1 CDS Arnit_0482 NC_014166.1 468328 468756 D InterPro IPR003728; KEGG: abu:Abu_2045 hypothetical protein; PFAM: protein of unknown function DUF150; SPTR: A8EWD9 Ribosome maturation factor rimP; PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein 468328..468756 Arcobacter nitrofigilis DSM 7299 9170629 YP_003654654.1 CDS Arnit_0483 NC_014166.1 468772 469398 D COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: vsp:VS_II0834 putative threonine efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q2BLH5 Putative threonine efflux protein-like; PFAM: LysE type translocator; lysine exporter protein 468772..469398 Arcobacter nitrofigilis DSM 7299 9170630 YP_003654655.1 CDS Arnit_0484 NC_014166.1 469398 470405 D COGs: COG0117 Pyrimidine deaminase; InterPro IPR004794:IPR016193:IPR002125:IPR002734; KEGG: abu:Abu_2046 bifunctional riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase; SPTR: A8EWE0 Bifunctional riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 469398..470405 Arcobacter nitrofigilis DSM 7299 9170631 YP_003654656.1 CDS Arnit_0485 NC_014166.1 470406 470723 D KEGG: hypothetical protein; SPTR: A0DH50 Chromosome undetermined scaffold_50, whole genome shotgun sequence; hypothetical protein 470406..470723 Arcobacter nitrofigilis DSM 7299 9170632 YP_003654657.1 CDS Arnit_0486 NC_014166.1 470858 471421 R COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR011768:IPR020599:IPR008991:IPR016027:IPR 013185:IPR001059:IPR015365:IPR014722:IPR012340; KEGG: abu:Abu_2047 elongation factor P; PFAM: Elongation factor KOW domain protein; Elongation factor P/YeiP protein; Elongation factor P; SPTR: A8EWE1 Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P complement(470858..471421) Arcobacter nitrofigilis DSM 7299 9170633 YP_003654658.1 CDS Arnit_0487 NC_014166.1 471434 473017 R COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterProIPR006140:IPR006236:IPR016040:IPR006139:IPR 002912; KEGG: abu:Abu_2048 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; SPTR: A8EWE2 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase complement(471434..473017) Arcobacter nitrofigilis DSM 7299 9170634 YP_003654659.1 CDS Arnit_0488 NC_014166.1 473035 474687 R COGs: COG0539 Ribosomal protein S1; InterPro IPR003029:IPR000110:IPR016027:IPR012340; KEGG: abu:Abu_2049 30S ribosomal protein S1; PFAM: RNA binding S1 domain protein; SPTR: A8EWE3 30S ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; RNA binding S1 domain-containing protein complement(473035..474687) Arcobacter nitrofigilis DSM 7299 9170635 YP_003654660.1 CDS Arnit_0489 NC_014166.1 474771 475604 R COGs: COG0761 Penicillin tolerance protein; InterPro IPR003451; KEGG: abu:Abu_2050 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: A8EWE4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); hydroxymethylbutenyl pyrophosphate reductase complement(474771..475604) Arcobacter nitrofigilis DSM 7299 9170636 YP_003654661.1 CDS Arnit_0490 NC_014166.1 475719 476999 R COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR001986:IPR006264:IPR016228:IPR013792; KEGG: abu:Abu_2051 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: A8EWE5 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase complement(475719..476999) Arcobacter nitrofigilis DSM 7299 9170637 YP_003654662.1 CDS Arnit_0491 NC_014166.1 477000 479318 R COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR002547:IPR005121:IPR004532:IPR016027:IPR 009061:IPR005147:IPR012340; KEGG: abu:Abu_2052 phenylalanyl-tRNA synthetase subunit beta; PFAM: ferredoxin-fold anticodon-binding; t-RNA-binding domain protein; tRNA synthetase B5; SPTR: A8EWE6 Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta complement(477000..479318) Arcobacter nitrofigilis DSM 7299 9170638 YP_003654663.1 CDS Arnit_0492 NC_014166.1 479315 480307 R COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterProIPR006195:IPR004529:IPR010978:IPR004188:IPR 002319; KEGG: abu:Abu_2053 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; PRIAM: Phenylalanine--tRNA ligase; SPTR: A8EWE7 Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha complement(479315..480307) Arcobacter nitrofigilis DSM 7299 9170639 YP_003654664.1 CDS Arnit_0493 NC_014166.1 480410 480754 D COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR019808:IPR011146:IPR011151; KEGG: abu:Abu_2054 HIT family protein; PFAM: histidine triad (HIT) protein; SPTR: A8EWE8 HIT family protein; PFAM: HIT domain; histidine triad (HIT) protein 480410..480754 Arcobacter nitrofigilis DSM 7299 9170640 YP_003654665.1 CDS Arnit_0494 NC_014166.1 480778 481716 R COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; InterPro IPR011763:IPR001095:IPR020582; KEGG: abu:Abu_2055 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; PRIAM: Acetyl-CoA carboxylase; SPTR: A8EWE9 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase carboxyl transferase subunit alpha complement(480778..481716) Arcobacter nitrofigilis DSM 7299 9170641 YP_003654666.1 CDS Arnit_0495 NC_014166.1 481758 483017 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterProIPR017568:IPR016039:IPR014030:IPR014031:IPR 016038; KEGG: abu:Abu_2056 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase; SPTR: A8EWF0 Beta ketoacyl-(Acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; 3-oxoacyl-(acyl-carrier-protein) synthase 2 complement(481758..483017) Arcobacter nitrofigilis DSM 7299 9170642 YP_003654667.1 CDS Arnit_0496 NC_014166.1 483150 483380 R InterPro IPR009081:IPR006162:IPR003231:IPR006163; KEGG: abu:Abu_2057 acyl carrier protein, putative; PFAM: phosphopantetheine-binding; SPTR: A8EWF1 Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein complement(483150..483380) Arcobacter nitrofigilis DSM 7299 9170643 YP_003654668.1 CDS Arnit_0497 NC_014166.1 483458 484201 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR011284:IPR002347:IPR016040; KEGG: abu:Abu_2058 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8EWF2 3-oxoacyl-(Acyl carrier protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase complement(483458..484201) Arcobacter nitrofigilis DSM 7299 9170644 YP_003654669.1 CDS Arnit_0498 NC_014166.1 484268 485017 R COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: abu:Abu_2059 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A8EWF3 Radical SAM domain protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(484268..485017) Arcobacter nitrofigilis DSM 7299 9170645 YP_003654670.1 CDS Arnit_0499 NC_014166.1 485010 485546 R KEGG: abu:Abu_2060 hypothetical protein; SPTR: C1ZZD3 Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; hypothetical protein complement(485010..485546) Arcobacter nitrofigilis DSM 7299 9170646 YP_003654671.1 CDS Arnit_0500 NC_014166.1 485546 486217 R COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR004479:IPR018317; KEGG: abu:Abu_2061 ExsB family transcriptional regulator; PFAM: Queuosine synthesis-like; SPTR: A8EWF5 Queuosine biosynthesis protein queC; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein; exsB protein complement(485546..486217) Arcobacter nitrofigilis DSM 7299 9170647 YP_003654672.1 CDS Arnit_0501 NC_014166.1 486210 487430 R COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: tdn:Suden_1912 molybdopterin binding domain-containing protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: B6BHS7 Molybdopterin binding domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein complement(486210..487430) Arcobacter nitrofigilis DSM 7299 9170648 YP_003654673.1 CDS Arnit_0502 NC_014166.1 487502 487906 D KEGG: abu:Abu_2062 hypothetical protein; SPTR: A8EWF6 Putative uncharacterized protein; hypothetical protein 487502..487906 Arcobacter nitrofigilis DSM 7299 9170649 YP_003654674.1 CDS Arnit_0503 NC_014166.1 487906 488574 D COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: abu:Abu_2063 16S ribosomal RNA methyltransferase RsmE; PFAM: protein of unknown function DUF558; SPTR: A8EWF7 Putative uncharacterized protein; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; hypothetical protein 487906..488574 Arcobacter nitrofigilis DSM 7299 9170650 YP_003654675.1 CDS Arnit_0504 NC_014166.1 488681 489352 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1736 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EVL0 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(488681..489352) Arcobacter nitrofigilis DSM 7299 9170651 YP_003654676.1 CDS Arnit_0505 NC_014166.1 489414 490607 R KEGG: wsu:WS0750 hypothetical protein; SPTR: C1ZXD2 Putative uncharacterized protein; hypothetical protein complement(489414..490607) Arcobacter nitrofigilis DSM 7299 9170652 YP_003654677.1 CDS Arnit_0506 NC_014166.1 490616 491953 R InterPro IPR009056:IPR003088; KEGG: wsu:WS0749 hypothetical protein; PFAM: cytochrome c class I; SPTR: C1ZXD1 Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Cytochrome c; cytochrome c class I complement(490616..491953) Arcobacter nitrofigilis DSM 7299 9170653 YP_003654678.1 CDS Arnit_0507 NC_014166.1 492112 493140 R COGs: COG2857 Cytochrome c1; InterPro IPR009056:IPR013838; KEGG: abu:Abu_2064 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; SPTR: A8EWF8 Ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; PFAM: Cytochrome c; Cytochrome C1 family; ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit complement(492112..493140) Arcobacter nitrofigilis DSM 7299 9170654 YP_003654679.1 CDS Arnit_0508 NC_014166.1 493137 494387 R COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797:IPR005798:IPR016174:IPR016175; KEGG: abu:Abu_2065 ubiquinol cytochrome c oxidoreductase, cytochrome b subunit; PFAM: Cytochrome b/b6 domain; SPTR: A8EWF9 Cytochrome b; PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD; cytochrome b/b6 domain-containing protein complement(493137..494387) Arcobacter nitrofigilis DSM 7299 9170655 YP_003654680.1 CDS Arnit_0509 NC_014166.1 494400 494906 R COGs: COG0723 Rieske Fe-S protein; InterProIPR017941:IPR017909:IPR006311:IPR006317:IPR 005805; KEGG: abu:Abu_2066 ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: A8EWG0 Ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; Tat (twin-arginine translocation) pathway signal sequence; ubiquinol-cytochrome c reductase iron-sulfur subunit complement(494400..494906) Arcobacter nitrofigilis DSM 7299 9170656 YP_003654681.1 CDS Arnit_0510 NC_014166.1 495085 496563 R COGs: COG0498 Threonine synthase; InterPro IPR000634:IPR004450:IPR001926; KEGG: abu:Abu_2067 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: A8EWG1 Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; threonine synthase complement(495085..496563) Arcobacter nitrofigilis DSM 7299 9170657 YP_003654682.1 CDS Arnit_0511 NC_014166.1 496578 497477 R COGs: COG0548 Acetylglutamate kinase; InterPro IPR004662:IPR011148:IPR001048; KEGG: abu:Abu_2068 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: A8EWG2 Acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; acetylglutamate kinase complement(496578..497477) Arcobacter nitrofigilis DSM 7299 9170658 YP_003654683.1 CDS Arnit_0512 NC_014166.1 497573 500308 D COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212; KEGG: abu:Abu_2069 putative recombination protein RecB; PFAM: UvrD/REP helicase; SPTR: A8EWG3 ATP-dependent DNA helicase, UvrD/REP family; PFAM: UvrD/REP helicase; UvrD/REP helicase 497573..500308 Arcobacter nitrofigilis DSM 7299 9170659 YP_003654684.1 CDS Arnit_0513 NC_014166.1 500305 500865 R COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733:IPR013785; KEGG: abu:Abu_2031 thiamine monophosphate synthase; PFAM: thiamine monophosphate synthase; SPTR: A8EWC5 Thiamine monophosphate synthase; PFAM: Thiamine monophosphate synthase/TENI; thiamine monophosphate synthase complement(500305..500865) Arcobacter nitrofigilis DSM 7299 9170660 YP_003654685.1 CDS Arnit_0514 NC_014166.1 501014 501700 R COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: abu:Abu_2030 F0F1 ATP synthase subunit A; PFAM: H+transporting two-sector ATPase A subunit; SPTR: A8EWC4 ATP synthase subunit a; TIGRFAM: ATP synthase F0, A subunit; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); ATP synthase F0 subunit A complement(501014..501700) Arcobacter nitrofigilis DSM 7299 9170661 YP_003654686.1 CDS Arnit_0515 NC_014166.1 501793 502998 R COGs: COG1171 Threonine dehydratase; InterPro IPR000634:IPR005789:IPR001926; KEGG: abu:Abu_2029 threonine deaminase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8EWC3 Threonine deaminase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; threonine dehydratase complement(501793..502998) Arcobacter nitrofigilis DSM 7299 9170662 YP_003654687.1 CDS Arnit_0516 NC_014166.1 503100 505379 R COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR006276:IPR013215:IPR002629; KEGG: tdn:Suden_0899 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; SPTR: Q30S54 Methionine synthase (B12-independent); TIGRFAM:5-methyltetrahydropteroyltriglutamate/homoc ysteineS-methyltransferase; PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(503100..505379) Arcobacter nitrofigilis DSM 7299 9170663 YP_003654688.1 CDS Arnit_0517 NC_014166.1 505427 505774 R KEGG: abu:Abu_2027 hypothetical protein; SPTR: A8EWC1 Putative uncharacterized protein; hypothetical protein complement(505427..505774) Arcobacter nitrofigilis DSM 7299 9170664 YP_003654689.1 CDS Arnit_0518 NC_014166.1 505900 506589 D COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649:IPR016009; KEGG: abu:Abu_2026 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: A8EWC0 tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (guanine-N1)-methyltransferase 505900..506589 Arcobacter nitrofigilis DSM 7299 9170665 YP_003654690.1 CDS Arnit_0519 NC_014166.1 506645 507001 D COGs: COG0335 Ribosomal protein L19; InterPro IPR001857; KEGG: abu:Abu_2025 50S ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: A8EWB9 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 506645..507001 Arcobacter nitrofigilis DSM 7299 9170666 YP_003654691.1 CDS Arnit_0520 NC_014166.1 507043 507567 D KEGG: cha:CHAB381_0073 hypothetical protein; SPTR: C2A0R0 Putative uncharacterized protein; PFAM: Phosphorylase superfamily; hypothetical protein 507043..507567 Arcobacter nitrofigilis DSM 7299 9170667 YP_003654692.1 CDS Arnit_0521 NC_014166.1 507564 508835 D COGs: COG1533 DNA repair photolyase; KEGG: cha:CHAB381_0074 hypothetical protein; SPTR: B6BLV9 Putative uncharacterized protein; hypothetical protein 507564..508835 Arcobacter nitrofigilis DSM 7299 9170668 YP_003654693.1 CDS Arnit_0522 NC_014166.1 508816 509589 D COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: pmx:PERMA_0980 patatin; PFAM: Patatin; SPTR: A3HRX0 Putative uncharacterized protein; PFAM: Patatin-like phospholipase; patatin 508816..509589 Arcobacter nitrofigilis DSM 7299 9170669 YP_003654694.1 CDS Arnit_0523 NC_014166.1 509706 510452 D COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: sun:SUN_1062 Mn2+/Zn2+ ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6Q960 Mn2+/Zn2+ ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 509706..510452 Arcobacter nitrofigilis DSM 7299 9170670 YP_003654695.1 CDS Arnit_0524 NC_014166.1 510446 511255 D COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: sun:SUN_1061 Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC-3 protein; SPTR: A6Q959 Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC 3 transport family; ABC protein 510446..511255 Arcobacter nitrofigilis DSM 7299 9170671 YP_003654696.1 CDS Arnit_0525 NC_014166.1 511255 511863 D COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: abu:Abu_2024 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: A8EWB8 Conserved hypothetical integral membrane protein; PFAM: SNARE associated Golgi protein; hypothetical protein 511255..511863 Arcobacter nitrofigilis DSM 7299 9170672 YP_003654697.1 CDS Arnit_0526 NC_014166.1 511860 512495 D COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002347:IPR002198:IPR016040; KEGG: cha:CHAB381_0075 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C2A0R5 Putative uncharacterized protein; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 511860..512495 Arcobacter nitrofigilis DSM 7299 9170673 YP_003654698.1 CDS Arnit_0527 NC_014166.1 512497 513870 D COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR000644:IPR006669:IPR006668:IPR006667; KEGG: sun:SUN_0711 magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SPTR: B6BJY9 Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE); magnesium transporter 512497..513870 Arcobacter nitrofigilis DSM 7299 9170674 YP_003654699.1 CDS Arnit_0528 NC_014166.1 513871 514341 R COGs: COG3610 conserved hypothetical protein; InterPro IPR010619; KEGG: abu:Abu_0318 hypothetical protein; PFAM: protein of unknown function DUF1212; SPTR: A8ERL9 Conserved hypothetical membrane protein (DUF1212 domain protein); PFAM: Protein of unknown function (DUF1212); hypothetical protein complement(513871..514341) Arcobacter nitrofigilis DSM 7299 9170675 YP_003654700.1 CDS Arnit_0529 NC_014166.1 514343 515110 R COGs: COG2966 conserved hypothetical protein; InterPro IPR010619; KEGG: abu:Abu_0319 hypothetical protein; PFAM: protein of unknown function DUF1212; SPTR: A8ERM0 Conserved hypothetical membrane protein (DUF1212 domain protein); PFAM: Protein of unknown function (DUF1212); hypothetical protein complement(514343..515110) Arcobacter nitrofigilis DSM 7299 9170676 YP_003654701.1 CDS Arnit_0530 NC_014166.1 515201 516157 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057:IPR000005; KEGG: abu:Abu_0341 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8ERP2 Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(515201..516157) Arcobacter nitrofigilis DSM 7299 9170677 YP_003654702.1 CDS Arnit_0531 NC_014166.1 516274 518361 D COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010105:IPR012910:IPR000531; KEGG: abu:Abu_0340 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8ERP1 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 516274..518361 Arcobacter nitrofigilis DSM 7299 9170678 YP_003654703.1 CDS Arnit_0532 NC_014166.1 518447 519427 R COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: abu:Abu_0344 cation efflux system, membrane protein; PFAM: cation efflux protein; SPTR: A8ERP5 Cation efflux system, membrane protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(518447..519427) Arcobacter nitrofigilis DSM 7299 9170679 YP_003654704.1 CDS Arnit_0533 NC_014166.1 519439 519738 R InterPro IPR003735; KEGG: abu:Abu_0343 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: A8ERP4 Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937; hypothetical protein complement(519439..519738) Arcobacter nitrofigilis DSM 7299 9170680 YP_003654705.1 CDS Arnit_0534 NC_014166.1 519847 520824 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057:IPR000005; KEGG: abu:Abu_0341 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8ERP2 Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(519847..520824) Arcobacter nitrofigilis DSM 7299 9170681 YP_003654706.1 CDS Arnit_0535 NC_014166.1 520940 523033 D COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: abu:Abu_0340 TonB-dependent receptor protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: A8ERP1 TonB-dependent receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor plug 520940..523033 Arcobacter nitrofigilis DSM 7299 9170682 YP_003654707.1 CDS Arnit_0536 NC_014166.1 523132 524916 D COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR017871:IPR011527:IPR 003593:IPR001140; KEGG: abu:Abu_0339 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A8ERP0 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter-like protein 523132..524916 Arcobacter nitrofigilis DSM 7299 9170683 YP_003654708.1 CDS Arnit_0537 NC_014166.1 524913 526682 D COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR017871:IPR011527:IPR 003593:IPR001140; KEGG: wsu:WS1265 ABC transporter ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: C2A117 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter-like protein 524913..526682 Arcobacter nitrofigilis DSM 7299 9170684 YP_003654709.1 CDS Arnit_0538 NC_014166.1 526675 527892 D InterPro IPR016196:IPR011701; KEGG: wsu:WS1266 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Q7MRK1 Putative uncharacterized protein; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 526675..527892 Arcobacter nitrofigilis DSM 7299 9170685 YP_003654710.1 CDS Arnit_0539 NC_014166.1 527879 529054 D InterPro IPR001958:IPR016196:IPR011701; KEGG: abu:Abu_0336 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ERN7 Major facilitator superfamily transporter; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 527879..529054 Arcobacter nitrofigilis DSM 7299 9170686 YP_003654711.1 CDS Arnit_0540 NC_014166.1 529048 529599 D COGs: COG1971 membrane protein; InterPro IPR018062:IPR003810; KEGG: abu:Abu_0335 hypothetical protein; PFAM: protein of unknown function DUF204; SPTR: A8ERN6 UPF0059 membrane protein Abu_0335; PFAM: Domain of unknown function DUF; hypothetical protein 529048..529599 Arcobacter nitrofigilis DSM 7299 9170687 YP_003654712.1 CDS Arnit_0541 NC_014166.1 529679 530461 D COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638; KEGG: cpr:CPR_2062 glutamine-binding periplasmic protein of glutamine ABC transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Q8XIM2 Probable amino acid ABC transporter; PFAM: Bacterial extracellular solute-binding proteins, family 3; family 3 extracellular solute-binding protein 529679..530461 Arcobacter nitrofigilis DSM 7299 9170688 YP_003654713.1 CDS Arnit_0542 NC_014166.1 530461 531135 D COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: asa:ASA_4387 ABC-type polar amino acid transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A4STT0 ABC-type polar amino acid transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit 530461..531135 Arcobacter nitrofigilis DSM 7299 9170689 YP_003654714.1 CDS Arnit_0543 NC_014166.1 531215 531547 D KEGG: abu:Abu_0320 hypothetical protein; SPTR: A8ERM1 Putative uncharacterized protein; hypothetical protein 531215..531547 Arcobacter nitrofigilis DSM 7299 9170690 YP_003654715.1 CDS Arnit_0544 NC_014166.1 531534 532157 D COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: abu:Abu_0321 pantothenate kinase; PFAM: Bvg accessory factor; PRIAM: Pantothenate kinase; SPTR: A8ERM2 Transcriptional activator, putative, Baf family; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; Baf family transcriptional activator 531534..532157 Arcobacter nitrofigilis DSM 7299 9170691 YP_003654716.1 CDS Arnit_0545 NC_014166.1 532135 532743 D COGs: COG0040 ATP phosphoribosyltransferase; InterPro IPR018198:IPR013820; KEGG: abu:Abu_0322 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: A8ERM3 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase 532135..532743 Arcobacter nitrofigilis DSM 7299 9170692 YP_003654717.1 CDS Arnit_0546 NC_014166.1 532743 533441 D InterPro IPR013216; KEGG: abu:Abu_0323 putative methyltransferase; PFAM: Methyltransferase type 11; SPTR: A8ERM4 Putative uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase 532743..533441 Arcobacter nitrofigilis DSM 7299 9170693 YP_003654718.1 CDS Arnit_0547 NC_014166.1 533453 534052 D KEGG: abu:Abu_0326 hypothetical protein; SPTR: A8ERM7 Putative uncharacterized protein; hypothetical protein 533453..534052 Arcobacter nitrofigilis DSM 7299 9170694 YP_003654719.1 CDS Arnit_0548 NC_014166.1 534068 535030 R COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR001412:IPR002306:IPR002305:IPR014729; KEGG: abu:Abu_0327 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: A8ERM8 Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(534068..535030) Arcobacter nitrofigilis DSM 7299 9170695 YP_003654720.1 CDS Arnit_0549 NC_014166.1 535065 536357 R COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: dar:Daro_0549 TRAP transporter solute receptor TAXI family protein; SPTR: A7C0T5 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; TAXI family TRAP transporter solute receptor complement(535065..536357) Arcobacter nitrofigilis DSM 7299 9170696 YP_003654721.1 CDS Arnit_0550 NC_014166.1 536466 536951 R KEGG: abu:Abu_2012 hypothetical protein; SPTR: A8EWA6 Putative uncharacterized protein; hypothetical protein complement(536466..536951) Arcobacter nitrofigilis DSM 7299 9170697 YP_003654722.1 CDS Arnit_0551 NC_014166.1 536948 538522 R InterPro IPR002355; KEGG: abu:Abu_2011 hypothetical protein; SPTR: A8EWA5 Putative uncharacterized protein; hypothetical protein complement(536948..538522) Arcobacter nitrofigilis DSM 7299 9170698 YP_003654723.1 CDS Arnit_0552 NC_014166.1 538532 538834 R KEGG: abu:Abu_2010 hypothetical protein; SPTR: A8EWA4 Putative uncharacterized protein; hypothetical protein complement(538532..538834) Arcobacter nitrofigilis DSM 7299 9170699 YP_003654724.1 CDS Arnit_0553 NC_014166.1 538846 540921 R COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR010105:IPR012910:IPR000531; KEGG: abu:Abu_2009 ferrichrome-iron receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8EWA3 Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(538846..540921) Arcobacter nitrofigilis DSM 7299 9170700 YP_003654725.1 CDS Arnit_0554 NC_014166.1 541027 542010 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR020449:IPR009057:IPR000005:IPR 012287; KEGG: wsu:WS0288 AraC-type DNA-binding proteins; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Q7MSM8 AraC-type DNA-binding proteins; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(541027..542010) Arcobacter nitrofigilis DSM 7299 9170701 YP_003654726.1 CDS Arnit_0555 NC_014166.1 542163 542846 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: abu:Abu_1868 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EVY3 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 542163..542846 Arcobacter nitrofigilis DSM 7299 9170702 YP_003654727.1 CDS Arnit_0556 NC_014166.1 542837 544552 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR004358:IPR003594:IPR011623; KEGG: abu:Abu_1869 two-component sensor histidine kinase; PFAM: Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EVY4 Sensor protein; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 542837..544552 Arcobacter nitrofigilis DSM 7299 9170703 YP_003654728.1 CDS Arnit_0557 NC_014166.1 544510 545181 R KEGG: abu:Abu_1862 hypothetical protein; SPTR: A8EVX7 Putative uncharacterized protein; hypothetical protein complement(544510..545181) Arcobacter nitrofigilis DSM 7299 9170704 YP_003654729.1 CDS Arnit_0558 NC_014166.1 545235 545390 R KEGG: cha:CHAB381_0440 hypothetical protein; SPTR: C5VQ72 Putative uncharacterized protein; hypothetical protein complement(545235..545390) Arcobacter nitrofigilis DSM 7299 9170705 YP_003654730.1 CDS Arnit_0559 NC_014166.1 545387 545689 R InterPro IPR018208; KEGG: abu:Abu_1855 hypothetical protein; SPTR: A8EVX0 Putative uncharacterized protein; hypothetical protein complement(545387..545689) Arcobacter nitrofigilis DSM 7299 9170706 YP_003654731.1 CDS Arnit_0560 NC_014166.1 545682 548126 R COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225:IPR006073:IPR002917:IPR011619:IPR 011642:IPR011640; KEGG: abu:Abu_1854 ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; nucleoside recognition domain protein; Ferrous iron transport B domain protein; SPTR: C2A0Z8 Putative uncharacterized protein; TIGRFAM: small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; small GTP-binding protein complement(545682..548126) Arcobacter nitrofigilis DSM 7299 9170707 YP_003654732.1 CDS Arnit_0561 NC_014166.1 548119 548343 R COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: dds:Ddes_0645 FeoA family protein; PFAM: FeoA family protein; SPTR: B8IYF8 FeoA family protein; PFAM: FeoA domain; FeoA family protein complement(548119..548343) Arcobacter nitrofigilis DSM 7299 9170708 YP_003654733.1 CDS Arnit_0562 NC_014166.1 548427 549653 R InterPro IPR019734:IPR013026; KEGG: vex:VEA_001861 tPR domain protein putative component of TonB system; SMART: Tetratricopeptide repeat; SPTR: A7K0Z5 Tetratricopeptide repeat domain protein; hypothetical protein complement(548427..549653) Arcobacter nitrofigilis DSM 7299 9170709 YP_003654734.1 CDS Arnit_0563 NC_014166.1 549650 550243 R COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260:IPR003538; KEGG: rce:RC1_0803 protein TonB; PFAM: Gram-negative tonB protein; SPTR: B6IRZ8 Protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB family protein complement(549650..550243) Arcobacter nitrofigilis DSM 7299 9170710 YP_003654735.1 CDS Arnit_0564 NC_014166.1 550245 550652 R COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: noc:Noc_0609 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Q1N4L4 TonB system transport protein ExbD2; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(550245..550652) Arcobacter nitrofigilis DSM 7299 9170711 YP_003654736.1 CDS Arnit_0565 NC_014166.1 550654 551172 R COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: shn:Shewana3_2624 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q0HTN8 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(550654..551172) Arcobacter nitrofigilis DSM 7299 9170712 YP_003654737.1 CDS Arnit_0566 NC_014166.1 551174 552487 R COGs: COG0811 Biopolymer transport protein; InterPro IPR017270:IPR002898; KEGG: vex:VEA_001857 MotA/TolQ/ExbB proton channel family protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q1VAM3 Putative TolR; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(551174..552487) Arcobacter nitrofigilis DSM 7299 9170713 YP_003654738.1 CDS Arnit_0567 NC_014166.1 552484 553233 R InterPro IPR016866; KEGG: aha:AHA_3434 TonB system biopolymer transport component; SPTR: A0KNS2 TonB system biopolymer transport component; PFAM: Protein of unknown function (DUF3450); TonB system biopolymer transport component complement(552484..553233) Arcobacter nitrofigilis DSM 7299 9170714 YP_003654739.1 CDS Arnit_0568 NC_014166.1 553319 554884 R COGs: COG3182 Uncharacterized iron-regulated membrane protein; KEGG: abu:Abu_2313 hypothetical protein; SPTR: A8EX48 Putative uncharacterized protein; hypothetical protein complement(553319..554884) Arcobacter nitrofigilis DSM 7299 9170715 YP_003654740.1 CDS Arnit_0569 NC_014166.1 554886 555179 R KEGG: abu:Abu_2010 hypothetical protein; SPTR: A8EWA4 Putative uncharacterized protein; hypothetical protein complement(554886..555179) Arcobacter nitrofigilis DSM 7299 9170716 YP_003654741.1 CDS Arnit_0570 NC_014166.1 555217 557496 R COGs: COG4774 Outer membrane receptor for monomeric catechols; InterPro IPR010105:IPR012910:IPR000531; KEGG: pen:PSEEN3225 TonB-dependent siderophore receptor FpvA; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: C1DGE3 TonB-dependent siderophore receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(555217..557496) Arcobacter nitrofigilis DSM 7299 9170717 YP_003654742.1 CDS Arnit_0571 NC_014166.1 557675 558919 D COGs: COG0172 Seryl-tRNA synthetase; InterProIPR006195:IPR002317:IPR018156:IPR010978:IPR 015866:IPR002314; KEGG: abu:Abu_0345 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: A8ERP6 Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 557675..558919 Arcobacter nitrofigilis DSM 7299 9170718 YP_003654743.1 CDS Arnit_0572 NC_014166.1 558945 559538 R InterPro IPR001387:IPR011051:IPR013096:IPR014710; KEGG: ckr:CKR_1206 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B9E182 Putative uncharacterized protein; PFAM: Cupin domain; Helix-turn-helix; XRE family transcriptional regulator complement(558945..559538) Arcobacter nitrofigilis DSM 7299 9170719 YP_003654744.1 CDS Arnit_0573 NC_014166.1 559759 560895 D COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027:IPR000103; KEGG: tdn:Suden_1213 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q30R90 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 559759..560895 Arcobacter nitrofigilis DSM 7299 9170720 YP_003654745.1 CDS Arnit_0574 NC_014166.1 560909 562015 D COGs: COG0686 Alanine dehydrogenase; InterProIPR008141:IPR013027:IPR016040:IPR007886:IPR 007698; KEGG: hap:HAPS_1913 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: B0NKM9 Putative uncharacterized protein; TIGRFAM: alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; alanine dehydrogenase 560909..562015 Arcobacter nitrofigilis DSM 7299 9170721 YP_003654746.1 CDS Arnit_0575 NC_014166.1 562109 562738 D COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: vpa:VPA1206 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q87GV9 Putative uncharacterized protein VPA1206; PFAM: LysE type translocator; lysine exporter protein 562109..562738 Arcobacter nitrofigilis DSM 7299 9170722 YP_003654747.1 CDS Arnit_0576 NC_014166.1 562751 564991 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_2291 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EX26 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer complement(562751..564991) Arcobacter nitrofigilis DSM 7299 9170723 YP_003654748.1 CDS Arnit_0577 NC_014166.1 565149 565763 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: sfr:Sfri_1305 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A6F7U5 Putative uncharacterized protein; PFAM: LysE type translocator; lysine exporter protein complement(565149..565763) Arcobacter nitrofigilis DSM 7299 9170724 YP_003654749.1 CDS Arnit_0578 NC_014166.1 565776 566522 R COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: pin:Ping_2821 ABC transporter for amino acids ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A1SYG2 ABC transporter for amino acids ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(565776..566522) Arcobacter nitrofigilis DSM 7299 9170725 YP_003654750.1 CDS Arnit_0579 NC_014166.1 566538 567617 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: pin:Ping_2820 ABC polar amino acid transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6F8P9 Amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit complement(566538..567617) Arcobacter nitrofigilis DSM 7299 9170726 YP_003654751.1 CDS Arnit_0580 NC_014166.1 567617 568798 R COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515; KEGG: pin:Ping_2823 ABC polar amino acid transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A1SYG0 ABC polar amino acid transporter inner membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; binding-protein-dependent transporter inner membrane component complement(567617..568798) Arcobacter nitrofigilis DSM 7299 9170727 YP_003654752.1 CDS Arnit_0581 NC_014166.1 568883 569899 R COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR005768:IPR001638; KEGG: hch:HCH_05807 amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Q1ZCK8 General L-amino acid-binding protein; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein; cationic amino acid ABC transporter periplasmic binding protein complement(568883..569899) Arcobacter nitrofigilis DSM 7299 9170728 YP_003654753.1 CDS Arnit_0582 NC_014166.1 570127 570507 R InterPro IPR005623; KEGG: tdn:Suden_1521 periplasmic nitrate reductase NapD; PFAM: NapD family protein; SPTR: B6BKR2 Periplasmic nitrate reductase NapD; PFAM: NapD protein; NapD family protein complement(570127..570507) Arcobacter nitrofigilis DSM 7299 9170729 YP_003654754.1 CDS Arnit_0583 NC_014166.1 570509 571459 R InterPro IPR011046:IPR015943; KEGG: abu:Abu_0353 putative periplasmic protein; SPTR: A8ERQ4 Putative periplasmic protein; hypothetical protein complement(570509..571459) Arcobacter nitrofigilis DSM 7299 9170730 YP_003654755.1 CDS Arnit_0584 NC_014166.1 571462 571938 R InterPro IPR017896:IPR017900:IPR001450; KEGG: abu:Abu_0354 ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ERQ5 Ferredoxin-type protein NapF; PFAM: 4Fe-4S binding domain; TIGRFAM: ferredoxin-type protein NapF; 4Fe-4S ferredoxin complement(571462..571938) Arcobacter nitrofigilis DSM 7299 9170731 YP_003654756.1 CDS Arnit_0585 NC_014166.1 571942 572550 R COGs: COG3043 Nitrate reductase cytochrome c-type subunit; InterPro IPR005591; KEGG: abu:Abu_0355 periplasmic nitrate reductase, small subunit, cytochrome c-type protein NapB; PFAM: Nitrate reductase cytochrome c-type subunit (NapB); SPTR: A8ERQ6 Periplasmic nitrate reductase, small subunit, cytochrome c-type protein NapB; PFAM: Nitrate reductase cytochrome c-type subunit (NapB); nitrate reductase cytochrome c-type subunit (napB) complement(571942..572550) Arcobacter nitrofigilis DSM 7299 9170732 YP_003654757.1 CDS Arnit_0586 NC_014166.1 572560 573375 R COGs: COG0348 Polyferredoxin; InterPro IPR017896:IPR017900:IPR011886:IPR001450; KEGG: abu:Abu_0356 quinol dehydrogenase membrane component; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ERQ7 Methylamine utilization ferredoxin-type protein NapH; TIGRFAM: ferredoxin-type protein, NapH/MauN family; TIGRFAM: ferredoxin-type protein, NapH/MauN family; ferredoxin-type protein, NapH/MauN family complement(572560..573375) Arcobacter nitrofigilis DSM 7299 9170733 YP_003654758.1 CDS Arnit_0587 NC_014166.1 573368 574150 R InterPro IPR017896:IPR017900:IPR004494:IPR001450; KEGG: tdn:Suden_1515 quinol dehydrogenase periplasmic component; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B6BKQ8 MauM/NapG ferredoxin-type protein; TIGRFAM: MauM/NapG family ferredoxin-type protein; PFAM: 4Fe-4S binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; MauM/NapG family ferredoxin-type protein; MauM/NapG family ferredoxin-type protein complement(573368..574150) Arcobacter nitrofigilis DSM 7299 9170734 YP_003654759.1 CDS Arnit_0588 NC_014166.1 574162 576984 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR017909:IPR010051:IPR006311:IPR009010:IPR 019546:IPR006963:IPR006656:IPR006657; KEGG: abu:Abu_0358 nitrate reductase catalytic subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; SPTR: A8ERQ9 Periplasmic nitrate reductase, large subunit; TIGRFAM: periplasmic nitrate reductase, large subunit; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: periplasmic nitrate reductase, large subunit; Tat (twin-arginine translocation) pathway signal sequence; periplasmic nitrate reductase large subunit complement(574162..576984) Arcobacter nitrofigilis DSM 7299 9170735 YP_003654760.1 CDS Arnit_0589 NC_014166.1 577171 578067 D COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR000312:IPR017459; KEGG: tdn:Suden_1980 glycosyl transferase family protein; SPTR: B6BHF8 Glycosyl transferase, family 3; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; glycosyl transferase family protein 577171..578067 Arcobacter nitrofigilis DSM 7299 9170736 YP_003654761.1 CDS Arnit_0590 NC_014166.1 578064 578621 D COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367:IPR016040; KEGG: nis:NIS_1777 hypothetical protein; PRIAM: Precorrin-2 dehydrogenase; SPTR: A6Q5X3 Putative uncharacterized protein; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain; siroheme synthase 578064..578621 Arcobacter nitrofigilis DSM 7299 9170737 YP_003654762.1 CDS Arnit_0591 NC_014166.1 578618 579349 R COGs: COG0007 Uroporphyrinogen-III methylase; InterProIPR003043:IPR006366:IPR000878:IPR014777:IPR 014776; KEGG: abu:Abu_0365 uroporphyrin III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: A8ERR6 Uroporphyrin III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(578618..579349) Arcobacter nitrofigilis DSM 7299 9170738 YP_003654763.1 CDS Arnit_0592 NC_014166.1 579371 580372 R KEGG: abu:Abu_0366 hypothetical protein; SPTR: A8ERR7 Putative uncharacterized protein; hypothetical protein complement(579371..580372) Arcobacter nitrofigilis DSM 7299 9170739 YP_003654764.1 CDS Arnit_0593 NC_014166.1 580369 581034 R COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR018490:IPR001808:IPR014710; KEGG: abu:Abu_0367 putative transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding; SPTR: B6BKQ5 Cyclic nucleotide-binding domain protein; PFAM: Cyclic nucleotide-binding domain; Crp/Fnr family transcriptional regulator complement(580369..581034) Arcobacter nitrofigilis DSM 7299 9170740 YP_003654765.1 CDS Arnit_0594 NC_014166.1 581131 582093 D COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterProIPR000385:IPR013483:IPR006638:IPR007197:IPR 010505:IPR013785; KEGG: abu:Abu_0369 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ERS0 Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; molybdenum cofactor biosynthesis protein A 581131..582093 Arcobacter nitrofigilis DSM 7299 9170741 YP_003654766.1 CDS Arnit_0595 NC_014166.1 582237 583259 D KEGG: ckr:CKR_1031 hypothetical protein; SPTR: B9E0Q7 Putative uncharacterized protein; hypothetical protein 582237..583259 Arcobacter nitrofigilis DSM 7299 9170742 YP_003654767.1 CDS Arnit_0596 NC_014166.1 583278 584063 R COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003439:IPR003593; KEGG: abu:Abu_1039 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETM5 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(583278..584063) Arcobacter nitrofigilis DSM 7299 9170743 YP_003654768.1 CDS Arnit_0597 NC_014166.1 584198 584470 D COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589:IPR005290:IPR009068; KEGG: abu:Abu_0370 30S ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: A8ERS1 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 584198..584470 Arcobacter nitrofigilis DSM 7299 9170744 YP_003654769.1 CDS Arnit_0598 NC_014166.1 584617 585018 D COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: abu:Abu_0371 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: A8ERS2 Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator); BadM/Rrf2 family transcriptional regulator 584617..585018 Arcobacter nitrofigilis DSM 7299 9170745 YP_003654770.1 CDS Arnit_0599 NC_014166.1 585015 586070 D COGs: COG2404 phosphohydrolase (DHH superfamily); InterPro IPR003156; KEGG: abu:Abu_0372 hypothetical protein; PFAM: phosphoesterase DHHA1; SPTR: A8ERS3 Putative uncharacterized protein; phosphoesterase DHHA1 585015..586070 Arcobacter nitrofigilis DSM 7299 9170746 YP_003654771.1 CDS Arnit_0600 NC_014166.1 586178 587446 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR000014:IPR000700:IPR011006:IPR 013655; KEGG: wsu:WS1304 diguanylate cyclase (fragment); PFAM: response regulator receiver; PAS fold-3 domain protein; SMART: response regulator receiver; PAS domain containing protein; SPTR: A8V332 DIGUANYLATE CYCLASE; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; putative PAS/PAC sensor protein 586178..587446 Arcobacter nitrofigilis DSM 7299 9170747 YP_003654772.1 CDS Arnit_0601 NC_014166.1 587443 588609 D COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: wsu:WS1277 membrane-bound lytic murein transglycosylase C; PFAM: Lytic transglycosylase catalytic; SPTR: Q7M906 MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE C ,; PFAM: Transglycosylase SLT domain; Domain of unknown function (DUF3393); lytic transglycosylase catalytic subunit 587443..588609 Arcobacter nitrofigilis DSM 7299 9170748 YP_003654773.1 CDS Arnit_0602 NC_014166.1 588737 590866 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013163; KEGG: abu:Abu_2291 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EX26 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer 588737..590866 Arcobacter nitrofigilis DSM 7299 9170749 YP_003654774.1 CDS Arnit_0603 NC_014166.1 590980 591288 D InterPro IPR001845:IPR011991; KEGG: abu:Abu_1932 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A8EW31 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family; ArsR family transcriptional regulator 590980..591288 Arcobacter nitrofigilis DSM 7299 9170750 YP_003654775.1 CDS Arnit_0604 NC_014166.1 591285 592538 D COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR000802; KEGG: abu:Abu_1931 arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; SPTR: C2A0X0 Na+/H+ antiporter NhaD-like permease; PFAM: Arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; arsenical pump membrane protein 591285..592538 Arcobacter nitrofigilis DSM 7299 9170751 YP_003654776.1 CDS Arnit_0605 NC_014166.1 592551 592952 D COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: abu:Abu_1935 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: A8EW34 Arsenate reductase; PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine phosphatase 592551..592952 Arcobacter nitrofigilis DSM 7299 9170752 YP_003654777.1 CDS Arnit_0606 NC_014166.1 592953 593912 D COGs: COG0701 permease; InterPro IPR005524; KEGG: sun:SUN_1419 hypothetical protein; PFAM: permease; SPTR: C2A085 Predicted permease; PFAM: Predicted permease; permease 592953..593912 Arcobacter nitrofigilis DSM 7299 9170753 YP_003654778.1 CDS Arnit_0607 NC_014166.1 593981 594409 D COGs: COG1832 CoA-binding protein; InterPro IPR003781:IPR016040; KEGG: abu:Abu_0373 CoA-binding domain-containing protein; PFAM: CoA-binding domain protein; SPTR: A8ERS4 CoA-binding domain protein; CoA-binding domain-containing protein 593981..594409 Arcobacter nitrofigilis DSM 7299 9170754 YP_003654779.1 CDS Arnit_0608 NC_014166.1 594381 595706 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR003661:IPR003594:IPR 004358:IPR009082; KEGG: abu:Abu_0374 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ERS5 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(594381..595706) Arcobacter nitrofigilis DSM 7299 9170755 YP_003654780.1 CDS Arnit_0609 NC_014166.1 595722 596408 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011991:IPR011006; KEGG: abu:Abu_0375 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ERS6 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(595722..596408) Arcobacter nitrofigilis DSM 7299 9170756 YP_003654781.1 CDS Arnit_0610 NC_014166.1 596596 597405 D InterPro IPR000297; KEGG: abu:Abu_0376 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: A8ERS7 Peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase 596596..597405 Arcobacter nitrofigilis DSM 7299 9170757 YP_003654782.1 CDS Arnit_0611 NC_014166.1 597419 598486 D COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR006411:IPR000771:IPR013785; KEGG: abu:Abu_0377 fructose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; SPTR: A8ERS8 Fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; fructose-bisphosphate aldolase 597419..598486 Arcobacter nitrofigilis DSM 7299 9170758 YP_003654783.1 CDS Arnit_0612 NC_014166.1 598827 600107 D InterPro IPR002104:IPR013762:IPR011010; KEGG: spl:Spea_1281 integrase family protein; PFAM: integrase family protein; SPTR: C2A3H3 Integrase; PFAM: Phage integrase family; integrase family protein 598827..600107 Arcobacter nitrofigilis DSM 7299 9170760 YP_003654784.1 CDS Arnit_0613 NC_014166.1 600104 600838 D KEGG: bbz:BbuZS7_0563 hypothetical protein; SPTR: C0SXY9 Putative uncharacterized protein; hypothetical protein 600104..600838 Arcobacter nitrofigilis DSM 7299 9170761 YP_003654785.1 CDS Arnit_0614 NC_014166.1 601011 601199 D KEGG: sun:SUN_2414 hypothetical protein; SPTR: A6QCZ1 Phage-related protein; hypothetical protein 601011..601199 Arcobacter nitrofigilis DSM 7299 9170762 YP_003654786.1 CDS Arnit_0615 NC_014166.1 601199 601525 D KEGG: hypothetical protein; SPTR: A2G850 Putative uncharacterized protein; hypothetical protein 601199..601525 Arcobacter nitrofigilis DSM 7299 9170763 YP_003654787.1 CDS Arnit_0616 NC_014166.1 601530 602195 D KEGG: nucleolar protein NOP5; SPTR: B3L3M4 Nucleolar protein NOP5, putative; hypothetical protein 601530..602195 Arcobacter nitrofigilis DSM 7299 9170764 YP_003654788.1 CDS Arnit_0617 NC_014166.1 602323 603048 D KEGG: hypothetical protein; SPTR: Q8IIE1 Conserved Plasmodium protein; hypothetical protein 602323..603048 Arcobacter nitrofigilis DSM 7299 9170765 YP_003654789.1 CDS Arnit_0618 NC_014166.1 603023 603310 D KEGG: llc:LACR_0075 hypothetical protein; SPTR: Q033C0 Conserved protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family; hypothetical protein 603023..603310 Arcobacter nitrofigilis DSM 7299 9170766 YP_003654790.1 CDS Arnit_0619 NC_014166.1 603303 603764 D KEGG: smt:Smal_2121 hypothetical protein; SPTR: B8LAK4 Putative uncharacterized protein; hypothetical protein 603303..603764 Arcobacter nitrofigilis DSM 7299 9170767 YP_003654791.1 CDS Arnit_0620 NC_014166.1 603745 603990 D KEGG: hypothetical protein; SPTR: A2EE42 Putative uncharacterized protein; hypothetical protein 603745..603990 Arcobacter nitrofigilis DSM 7299 9170768 YP_003654792.1 CDS Arnit_0621 NC_014166.1 603993 604202 D KEGG: hypothetical protein; SPTR: A2G5Q5 Putative uncharacterized protein; hypothetical protein 603993..604202 Arcobacter nitrofigilis DSM 7299 9170769 YP_003654793.1 CDS Arnit_0622 NC_014166.1 604232 605689 D KEGG: mbt:JTY_0315 PPE family protein; SPTR: Q7U2B2 PPE FAMILY PROTEIN; hypothetical protein 604232..605689 Arcobacter nitrofigilis DSM 7299 9170770 YP_003654794.1 CDS Arnit_0623 NC_014166.1 605766 605870 D hypothetical protein 605766..605870 Arcobacter nitrofigilis DSM 7299 9170771 YP_003654795.1 CDS Arnit_0624 NC_014166.1 606029 606289 D KEGG: pin:Ping_2581 hypothetical protein; SPTR: A1SXT7 Putative uncharacterized protein; hypothetical protein 606029..606289 Arcobacter nitrofigilis DSM 7299 9170772 YP_003654796.1 CDS Arnit_0625 NC_014166.1 606962 607240 R KEGG: hypothetical protein; SPTR: B4PR57 GE26342; hypothetical protein complement(606962..607240) Arcobacter nitrofigilis DSM 7299 9170773 YP_003654797.1 CDS Arnit_0626 NC_014166.1 607289 607522 R InterPro IPR001000; KEGG: bai:BAA_2636 transcriptional regulator, MerR family; SPTR: Q05352 Immuno-dominant variable surface antigen; MerR family transcriptional regulator complement(607289..607522) Arcobacter nitrofigilis DSM 7299 9170774 YP_003654798.1 CDS Arnit_0627 NC_014166.1 607563 607781 R KEGG: abu:Abu_1755 hypothetical protein; SPTR: A8EVM8 Putative uncharacterized protein; hypothetical protein complement(607563..607781) Arcobacter nitrofigilis DSM 7299 9170775 YP_003654799.1 CDS Arnit_0628 NC_014166.1 607924 608136 D KEGG: IQ calmodulin-binding motif family protein; SPTR: C5QTE1 Proline dehydrogenase; hypothetical protein 607924..608136 Arcobacter nitrofigilis DSM 7299 9170776 YP_003654800.1 CDS Arnit_0629 NC_014166.1 608149 608418 D KEGG: sun:SUN_2420 hypothetical protein; SPTR: A6QCZ7 Putative uncharacterized protein; hypothetical protein 608149..608418 Arcobacter nitrofigilis DSM 7299 9170777 YP_003654801.1 CDS Arnit_0630 NC_014166.1 608429 608542 D hypothetical protein 608429..608542 Arcobacter nitrofigilis DSM 7299 9170778 YP_003654802.1 CDS Arnit_0631 NC_014166.1 608539 608691 D KEGG: GF19101 gene product from transcript GF19101-RA; SPTR: B3MZM3 GF19101; hypothetical protein 608539..608691 Arcobacter nitrofigilis DSM 7299 9170779 YP_003654803.1 CDS Arnit_0632 NC_014166.1 609151 609492 R COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abu:Abu_1046 hypothetical protein; PFAM: helix-turn-helix HxlR type; SPTR: A8ETN2 Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix; HxlR family transcriptional regulator complement(609151..609492) Arcobacter nitrofigilis DSM 7299 9170780 YP_003654804.1 CDS Arnit_0633 NC_014166.1 609615 610778 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: wsu:WS0768 acriflavin resistance A precursor; PFAM: secretion protein HlyD family protein; SPTR: Q7M9Q0 ACRIFLAVIN RESISTANCE A; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter 609615..610778 Arcobacter nitrofigilis DSM 7299 9170781 YP_003654805.1 CDS Arnit_0634 NC_014166.1 610781 613912 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: wsu:WS0770 multidrug resistance protein MexB; PFAM: acriflavin resistance protein; SPTR: C2A2V6 Hydrophobe/amphiphile efflux-1 (HAE1) family transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux transporter 610781..613912 Arcobacter nitrofigilis DSM 7299 9170782 YP_003654806.1 CDS Arnit_0635 NC_014166.1 613902 615323 D COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: wsu:WS0771 putative outer membrane channel protein; PFAM: outer membrane efflux protein; SPTR: C2A2V7 Efflux transporter, outer membrane factor lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 613902..615323 Arcobacter nitrofigilis DSM 7299 9170783 YP_003654807.1 CDS Arnit_0636 NC_014166.1 615449 615976 R KEGG: cyh:Cyan8802_2166 hypothetical protein; SPTR: Q4FRA5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3124); hypothetical protein complement(615449..615976) Arcobacter nitrofigilis DSM 7299 9170784 YP_003654808.1 CDS Arnit_0637 NC_014166.1 616073 617506 R COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000160; KEGG: nis:NIS_1639 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A6Q5I6 Putative uncharacterized protein; PFAM: EAL domain; GGDEF domain; diguanylate cyclase/phosphodiesterase complement(616073..617506) Arcobacter nitrofigilis DSM 7299 9170785 YP_003654809.1 CDS Arnit_0638 NC_014166.1 617604 617999 R COGs: COG0848 Biopolymer transport protein; InterPro IPR003400:IPR000871; KEGG: abu:Abu_0380 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ERT1 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(617604..617999) Arcobacter nitrofigilis DSM 7299 9170786 YP_003654810.1 CDS Arnit_0639 NC_014166.1 617996 618472 R COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: abu:Abu_0381 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8ERT2 Biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(617996..618472) Arcobacter nitrofigilis DSM 7299 9170787 YP_003654811.1 CDS Arnit_0640 NC_014166.1 618517 619404 D COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; InterPro IPR001926; KEGG: abu:Abu_0382 hypothetical protein; SPTR: A8ERT3 Putative uncharacterized protein; hypothetical protein 618517..619404 Arcobacter nitrofigilis DSM 7299 9170788 YP_003654812.1 CDS Arnit_0641 NC_014166.1 619431 622343 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR015168:IPR001638:IPR 013767:IPR003661:IPR003594:IPR004358:IPR009082; KEGG: abu:Abu_1730 two-component sensor histidine kinase; PFAM: NMT1/THI5 like domain protein; extracellular solute-binding protein family 3; PAS fold domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: B6BKU9 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; NMT1/THI5 like; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor signal transduction histidine kinase 619431..622343 Arcobacter nitrofigilis DSM 7299 9170789 YP_003654813.1 CDS Arnit_0642 NC_014166.1 622377 622889 D COGs: COG0703 Shikimate kinase; InterPro IPR000623; KEGG: abu:Abu_0383 shikimate kinase; PFAM: shikimate kinase; PRIAM: Shikimate kinase; SPTR: A8ERT4 Shikimate kinase; PFAM: Shikimate kinase; shikimate kinase 622377..622889 Arcobacter nitrofigilis DSM 7299 9170790 YP_003654814.1 CDS Arnit_0643 NC_014166.1 622897 624189 D COGs: COG0141 Histidinol dehydrogenase; InterPro IPR012131:IPR016161; KEGG: abu:Abu_0384 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: A8ERT5 Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase 622897..624189 Arcobacter nitrofigilis DSM 7299 9170791 YP_003654815.1 CDS Arnit_0644 NC_014166.1 624191 624460 D InterPro IPR018563; KEGG: abu:Abu_0385 hypothetical protein; PFAM: Domain of unknown function DUF2018; SPTR: A8ERT6 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2018); hypothetical protein 624191..624460 Arcobacter nitrofigilis DSM 7299 9170792 YP_003654816.1 CDS Arnit_0645 NC_014166.1 624472 625368 D COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: abu:Abu_0386 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: A8ERT7 Octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; polyprenyl synthetase 624472..625368 Arcobacter nitrofigilis DSM 7299 9170793 YP_003654817.1 CDS Arnit_0646 NC_014166.1 625372 626667 D COGs: COG0373 Glutamyl-tRNA reductase; InterProIPR000343:IPR015895:IPR006151:IPR015896:IPR 016040:IPR018214; KEGG: abu:Abu_0387 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; PRIAM: Glutamyl-tRNA reductase; SPTR: A8ERT8 Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase 625372..626667 Arcobacter nitrofigilis DSM 7299 9170794 YP_003654818.1 CDS Arnit_0647 NC_014166.1 626678 628396 D COGs: COG0442 Prolyl-tRNA synthetase; InterProIPR006195:IPR004500:IPR002314:IPR007214:IPR 004154:IPR002316; KEGG: abu:Abu_0388 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; PRIAM: Proline--tRNA ligase; SPTR: A8ERT9 Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase 626678..628396 Arcobacter nitrofigilis DSM 7299 9170795 YP_003654819.1 CDS Arnit_0648 NC_014166.1 628406 629221 D COGs: COG3264 Small-conductance mechanosensitive channel; InterProIPR006685:IPR011066:IPR010920:IPR011014:IPR 006162; KEGG: abu:Abu_0389 mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: B5JYK0 MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel; Conserved TM helix; mechanosensitive ion channel MscS 628406..629221 Arcobacter nitrofigilis DSM 7299 9170796 YP_003654820.1 CDS Arnit_0649 NC_014166.1 629193 630596 D COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646; KEGG: sun:SUN_0962 polynucleotide adenylyltransferase/metal-dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; SPTR: A6Q8W0 Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase; PFAM: Poly A polymerase head domain; polynucleotide adenylyltransferase 629193..630596 Arcobacter nitrofigilis DSM 7299 9170797 YP_003654821.1 CDS Arnit_0650 NC_014166.1 630586 631815 R COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR004563:IPR003010; KEGG: abu:Abu_0393 apolipoprotein N-acyltransferase; SPTR: A8ERU4 Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(630586..631815) Arcobacter nitrofigilis DSM 7299 9170798 YP_003654822.1 CDS Arnit_0651 NC_014166.1 631841 632110 D COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: abu:Abu_0394 preprotein translocase subunit; PFAM: YajC family protein; SPTR: A8ERU5 Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC 631841..632110 Arcobacter nitrofigilis DSM 7299 9170799 YP_003654823.1 CDS Arnit_0652 NC_014166.1 632186 633754 D COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR005791:IPR003335:IPR001036; KEGG: abu:Abu_0395 protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: A8ERU6 Protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD 632186..633754 Arcobacter nitrofigilis DSM 7299 9170800 YP_003654824.1 CDS Arnit_0653 NC_014166.1 633754 634725 D COGs: COG0341 Preprotein translocase subunit SecF; InterPro IPR005665:IPR003335; KEGG: nis:NIS_1465 preprotein translocase subunit SecF; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: A6Q513 Preprotein translocase subunit F; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein-export membrane protein SecF 633754..634725 Arcobacter nitrofigilis DSM 7299 9170801 YP_003654825.1 CDS Arnit_0654 NC_014166.1 634927 636492 D KEGG: abu:Abu_1561 hypothetical protein; SPTR: A8EV36 Putative uncharacterized protein; hypothetical protein 634927..636492 Arcobacter nitrofigilis DSM 7299 9170802 YP_003654826.1 CDS Arnit_0655 NC_014166.1 636608 637066 D KEGG: abu:Abu_1561 hypothetical protein; SPTR: A8EV36 Putative uncharacterized protein; hypothetical protein 636608..637066 Arcobacter nitrofigilis DSM 7299 9170803 YP_003654827.1 CDS Arnit_0656 NC_014166.1 637160 637504 D KEGG: abu:Abu_0401 hypothetical protein; SPTR: A8ERV2 Putative uncharacterized protein; hypothetical protein 637160..637504 Arcobacter nitrofigilis DSM 7299 9170804 YP_003654828.1 CDS Arnit_0657 NC_014166.1 637504 639969 D COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR002302:IPR002300:IPR014729:IPR009008:IPR 009080:IPR001412; KEGG: abu:Abu_0402 leucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; SPTR: A8ERV3 Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 637504..639969 Arcobacter nitrofigilis DSM 7299 9170805 YP_003654829.1 CDS Arnit_0658 NC_014166.1 639972 640502 D KEGG: abu:Abu_0403 hypothetical protein; SPTR: A8ERV4 Putative uncharacterized protein; hypothetical protein 639972..640502 Arcobacter nitrofigilis DSM 7299 9170806 YP_003654830.1 CDS Arnit_0659 NC_014166.1 640492 641661 D COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR001645:IPR013221:IPR004101; KEGG: abu:Abu_0404 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; PRIAM: Tetrahydrofolate synthase; SPTR: A8ERV5 Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 640492..641661 Arcobacter nitrofigilis DSM 7299 9170807 YP_003654831.1 CDS Arnit_0660 NC_014166.1 641645 642559 D COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: pmx:PERMA_1977 peptidase, M23/M37 family; PFAM: Peptidase M23; SPTR: C0QST4 Peptidase, M23/M37 family; PFAM: Peptidase family M23; peptidase M23 641645..642559 Arcobacter nitrofigilis DSM 7299 9170808 YP_003654832.1 CDS Arnit_0661 NC_014166.1 642505 642963 D COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: hha:Hhal_1996 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: C5F1N9 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583; hypothetical protein 642505..642963 Arcobacter nitrofigilis DSM 7299 9170809 YP_003654833.1 CDS Arnit_0662 NC_014166.1 642932 645052 D COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014021:IPR001650:IPR006935:IPR014001; KEGG: abu:Abu_0405 helicase; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ERV6 Probable helicase; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; type III restriction protein res subunit 642932..645052 Arcobacter nitrofigilis DSM 7299 9170810 YP_003654834.1 CDS Arnit_0663 NC_014166.1 645060 646688 D COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR003148:IPR006153:IPR016040; KEGG: cff:CFF8240_0767 sodium/hydrogen exchanger family protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; SPTR: C2A1I1 Kef-type K+ transport system, membrane component; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; sodium/hydrogen exchanger 645060..646688 Arcobacter nitrofigilis DSM 7299 9170811 YP_003654835.1 CDS Arnit_0664 NC_014166.1 646706 648412 R COGs: COG3176 Putative hemolysin; InterPro IPR002123:IPR016181; KEGG: abu:Abu_0406 phospholipid/glycerol acyltransferase, hemolysin; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: A8ERV7 Phospholipid/glycerol acyltransferase, possible hemolysin; PFAM: Acyltransferase; phospholipid/glycerol acyltransferase complement(646706..648412) Arcobacter nitrofigilis DSM 7299 9170812 YP_003654836.1 CDS Arnit_0665 NC_014166.1 648534 649241 D KEGG: abu:Abu_0407 hypothetical protein; SPTR: A8ERV8 Putative uncharacterized protein; hypothetical protein 648534..649241 Arcobacter nitrofigilis DSM 7299 9170813 YP_003654837.1 CDS Arnit_0666 NC_014166.1 649317 651584 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer complement(649317..651584) Arcobacter nitrofigilis DSM 7299 9170814 YP_003654838.1 CDS Arnit_0667 NC_014166.1 651794 652090 D KEGG: abu:Abu_0409 hypothetical protein; SPTR: A8ERW0 Putative uncharacterized protein; hypothetical protein 651794..652090 Arcobacter nitrofigilis DSM 7299 9170815 YP_003654839.1 CDS Arnit_0668 NC_014166.1 652093 655062 D COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR014021:IPR001650:IPR004576:IPR003711:IPR 011545:IPR005118:IPR014001:IPR019793; KEGG: abu:Abu_0410 transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ERW1 Transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor 652093..655062 Arcobacter nitrofigilis DSM 7299 9170816 YP_003654840.1 CDS Arnit_0669 NC_014166.1 655165 657276 R COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000700:IPR000160:IPR013163:IPR 013655:IPR001610; KEGG: wsu:WS1205 sensory box/GGDEF family protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; Cache type 2 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Q7M947 SENSORY BOX/GGDEF FAMILY PROTEIN; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: Cache domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS/PAC sensor-containg diguanylate cyclase complement(655165..657276) Arcobacter nitrofigilis DSM 7299 9170817 YP_003654841.1 CDS Arnit_0670 NC_014166.1 657495 657704 D KEGG: abu:Abu_1090 hypothetical protein; SPTR: A8ETS6 Putative uncharacterized protein; hypothetical protein 657495..657704 Arcobacter nitrofigilis DSM 7299 9170818 YP_003654842.1 CDS Arnit_0671 NC_014166.1 657707 659233 D COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: abu:Abu_1089 cytochrome bd oxidase, subunit I; PFAM: cytochrome bd ubiquinol oxidase subunit I; SPTR: A8ETS5 Cytochrome bd oxidase, subunit I; PFAM: Bacterial Cytochrome Ubiquinol Oxidase; cytochrome bd ubiquinol oxidase subunit I 657707..659233 Arcobacter nitrofigilis DSM 7299 9170819 YP_003654843.1 CDS Arnit_0672 NC_014166.1 659235 660368 D COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: abu:Abu_1088 cytochrome bd oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; SPTR: A8ETS4 Cytochrome bd oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); cytochrome d ubiquinol oxidase subunit II 659235..660368 Arcobacter nitrofigilis DSM 7299 9170820 YP_003654844.1 CDS Arnit_0673 NC_014166.1 660580 661035 D InterPro IPR003731; KEGG: nis:NIS_0145 hypothetical protein; SPTR: A6Q1A1 Putative uncharacterized protein; PFAM: Dinitrogenase iron-molybdenum cofactor; hypothetical protein 660580..661035 Arcobacter nitrofigilis DSM 7299 9170821 YP_003654845.1 CDS Arnit_0674 NC_014166.1 661065 662555 R COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646:IPR004647:IPR011167; KEGG: abu:Abu_1928 fumarate hydratase, class I; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: A8EW27 Fumarate hydratase, class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; tartrate/fumarate subfamily hydro-lyase subunit alpha complement(661065..662555) Arcobacter nitrofigilis DSM 7299 9170822 YP_003654846.1 CDS Arnit_0675 NC_014166.1 662752 663042 D KEGG: abu:Abu_0413 putative periplasmic protein; SPTR: A8ERW4 Hypothetical periplasmic protein; hypothetical protein 662752..663042 Arcobacter nitrofigilis DSM 7299 9170823 YP_003654847.1 CDS Arnit_0676 NC_014166.1 663053 663730 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: abu:Abu_0414 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ERW5 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 663053..663730 Arcobacter nitrofigilis DSM 7299 9170824 YP_003654848.1 CDS Arnit_0677 NC_014166.1 663727 664974 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR003661:IPR003594:IPR 009082; KEGG: abu:Abu_0415 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERW6 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 663727..664974 Arcobacter nitrofigilis DSM 7299 9170825 YP_003654849.1 CDS Arnit_0678 NC_014166.1 664971 666110 D COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: abu:Abu_0416 hypothetical protein; PFAM: HI0933 family protein; SPTR: A8ERW7 Putative uncharacterized protein; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275; hypothetical protein 664971..666110 Arcobacter nitrofigilis DSM 7299 9170826 YP_003654850.1 CDS Arnit_0679 NC_014166.1 666113 666922 R COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: tdn:Suden_2063 hypothetical protein; PFAM: ABC-3 protein; SPTR: Q30NU4 ABC-3; PFAM: ABC 3 transport family; ABC protein complement(666113..666922) Arcobacter nitrofigilis DSM 7299 9170827 YP_003654851.1 CDS Arnit_0680 NC_014166.1 666931 667680 R COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: tdn:Suden_2064 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q30NU3 ABC transporter-related protein; PFAM: ABC transporter; ABC transporter-like protein complement(666931..667680) Arcobacter nitrofigilis DSM 7299 9170828 YP_003654852.1 CDS Arnit_0681 NC_014166.1 667671 668540 R COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127:IPR006129:IPR006128; KEGG: lin:lin0191 hypothetical protein; PFAM: periplasmic solute binding protein; SPTR: Q92FB5 Lin0191 protein; PFAM: Periplasmic solute binding protein family; periplasmic solute binding protein complement(667671..668540) Arcobacter nitrofigilis DSM 7299 9170829 YP_003654853.1 CDS Arnit_0682 NC_014166.1 668701 668859 D KEGG: lsp:Bsph_4691 methyl-accepting chemotaxis protein; hypothetical protein 668701..668859 Arcobacter nitrofigilis DSM 7299 9170830 YP_003654854.1 CDS Arnit_0683 NC_014166.1 668905 669717 D COGs: COG1692 conserved hypothetical protein; InterPro IPR005235:IPR004843:IPR002114; KEGG: abu:Abu_0421 hypothetical protein; PFAM: metallophosphoesterase; SPTR: A8ERX2 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR00282; metallophosphoesterase 668905..669717 Arcobacter nitrofigilis DSM 7299 9170831 YP_003654855.1 CDS Arnit_0684 NC_014166.1 669710 670351 D COGs: COG2231 Uncharacterized protein related to Endonuclease III; InterPro IPR003265:IPR011257; KEGG: nam:NAMH_0368 endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: B9L833 Endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; HhH-GPD family protein 669710..670351 Arcobacter nitrofigilis DSM 7299 9170832 YP_003654856.1 CDS Arnit_0685 NC_014166.1 670365 671153 D KEGG: abu:Abu_0422 hypothetical protein; SPTR: A8ERX3 Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; hypothetical protein 670365..671153 Arcobacter nitrofigilis DSM 7299 9170833 YP_003654857.1 CDS Arnit_0686 NC_014166.1 671155 671406 D KEGG: abu:Abu_0423 hypothetical protein; SPTR: A8ERX4 Putative uncharacterized protein; hypothetical protein 671155..671406 Arcobacter nitrofigilis DSM 7299 9170834 YP_003654858.1 CDS Arnit_0687 NC_014166.1 671421 672131 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: abu:Abu_0424 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: A8ERX5 Bifunctional ubiquinone/menaquinone biosynthesis methlytransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase 671421..672131 Arcobacter nitrofigilis DSM 7299 9170835 YP_003654859.1 CDS Arnit_0688 NC_014166.1 672140 673327 D COGs: COG1570 Exonuclease VII large subunit; InterPro IPR003753:IPR004365:IPR020579; KEGG: abu:Abu_0425 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: Exodeoxyribonuclease VII; SPTR: A8ERX6 Exodeoxyribonuclease 7 large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 672140..673327 Arcobacter nitrofigilis DSM 7299 9170836 YP_003654860.1 CDS Arnit_0689 NC_014166.1 673397 673879 D COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: abu:Abu_0426 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: A8ERX7 Chemotaxis protein CheW; PFAM: CheW-like domain; CheW protein 673397..673879 Arcobacter nitrofigilis DSM 7299 9170837 YP_003654861.1 CDS Arnit_0690 NC_014166.1 673892 674296 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: abu:Abu_0545 EAL/GGDEF domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ES88 EAL/GGDEF domain protein; PFAM: Response regulator receiver domain; response regulator receiver protein 673892..674296 Arcobacter nitrofigilis DSM 7299 9170838 YP_003654862.1 CDS Arnit_0691 NC_014166.1 674297 675664 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR000014:IPR000700:IPR013767:IPR 011006; KEGG: wsu:WS1304 diguanylate cyclase (fragment); PFAM: response regulator receiver; PAS fold domain protein; SMART: response regulator receiver; SPTR: A8V332 DIGUANYLATE CYCLASE; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; putative PAS/PAC sensor protein 674297..675664 Arcobacter nitrofigilis DSM 7299 9170839 YP_003654863.1 CDS Arnit_0692 NC_014166.1 675670 676197 R COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR015891; KEGG: abu:Abu_0427 peptidyl-prolyl cis-trans isomerase-like protein; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; PRIAM: Peptidylprolyl isomerase; SPTR: A8ERX8 Peptidyl-prolyl cis-trans isomerase-like protein; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl isomerase complement(675670..676197) Arcobacter nitrofigilis DSM 7299 9170840 YP_003654864.1 CDS Arnit_0693 NC_014166.1 676330 676692 D COGs: COG3411 Ferredoxin; InterPro IPR012335:IPR012336; KEGG: nis:NIS_0254 2Fe-2S ferredoxin; SPTR: A6Q1K9 2Fe-2S ferredoxin; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; 2Fe-2S ferredoxin 676330..676692 Arcobacter nitrofigilis DSM 7299 9170841 YP_003654865.1 CDS Arnit_0694 NC_014166.1 676703 677086 D COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR003190:IPR009010; KEGG: abu:Abu_0428 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: A8ERX9 Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; aspartate 1-decarboxylase 676703..677086 Arcobacter nitrofigilis DSM 7299 9170842 YP_003654866.1 CDS Arnit_0695 NC_014166.1 677079 677402 D COGs: COG0718 conserved hypothetical protein; InterPro IPR004401; KEGG: abu:Abu_0429 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8ERY0 UPF0133 protein Abu_0429; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: conserved hypothetical protein TIGR00103; hypothetical protein 677079..677402 Arcobacter nitrofigilis DSM 7299 9170843 YP_003654867.1 CDS Arnit_0696 NC_014166.1 677402 678262 D COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: abu:Abu_0430 geranyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: A8ERY1 Geranyltranstransferase; PFAM: Polyprenyl synthetase; polyprenyl synthetase 677402..678262 Arcobacter nitrofigilis DSM 7299 9170844 YP_003654868.1 CDS Arnit_0697 NC_014166.1 678400 678657 D COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR020818:IPR001476:IPR011032; KEGG: abu:Abu_0431 10 kDa chaperonin; PFAM: Chaperonin Cpn10; SPTR: A8ERY2 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit; chaperonin cpn10 678400..678657 Arcobacter nitrofigilis DSM 7299 9170845 YP_003654869.1 CDS Arnit_0698 NC_014166.1 678657 680300 D COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844:IPR002423:IPR018370; KEGG: abu:Abu_0432 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: A8ERY3 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin GroEL 678657..680300 Arcobacter nitrofigilis DSM 7299 9170846 YP_003654870.1 CDS Arnit_0699 NC_014166.1 680600 681220 R InterPro IPR005358; KEGG: abu:Abu_0442 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: A8ERZ3 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein complement(680600..681220) Arcobacter nitrofigilis DSM 7299 9170847 YP_003654871.1 CDS Arnit_0700 NC_014166.1 681290 683089 D COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR017932:IPR005855:IPR000583:IPR001347; KEGG: abu:Abu_0444 glucosamine--fructose-6-phosphate aminotransferase; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); SPTR: A8ERZ5 Glucosamine-fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine/fructose-6-phosphate aminotransferase 681290..683089 Arcobacter nitrofigilis DSM 7299 9170848 YP_003654872.1 CDS Arnit_0701 NC_014166.1 683345 684562 D COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: tdn:Suden_1476 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: Q30QH8 Methionine adenosyltransferase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 683345..684562 Arcobacter nitrofigilis DSM 7299 9170849 YP_003654873.1 CDS Arnit_0702 NC_014166.1 684582 685451 D COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR011762:IPR000438:IPR000022; KEGG: abu:Abu_0446 acetyl-CoA carboxylase subunit beta; PFAM: carboxyl transferase; SPTR: A8ERZ7 Acetyl-CoA carboxylase, carboxyltransferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase carboxyl transferase subunit beta 684582..685451 Arcobacter nitrofigilis DSM 7299 9170850 YP_003654874.1 CDS Arnit_0703 NC_014166.1 685451 686062 D COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733:IPR013785; KEGG: abu:Abu_0447 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; SPTR: A8ERZ8 Thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase 685451..686062 Arcobacter nitrofigilis DSM 7299 9170851 YP_003654875.1 CDS Arnit_0704 NC_014166.1 686055 686516 D COGs: COG1576 conserved hypothetical protein; InterPro IPR003742; KEGG: abu:Abu_0448 hypothetical protein; PFAM: protein of unknown function DUF163; SPTR: A8ERZ9 Ribosomal RNA large subunit methyltransferase H; PFAM: Predicted SPOUT methyltransferase; TIGRFAM: conserved hypothetical protein TIGR00246; hypothetical protein 686055..686516 Arcobacter nitrofigilis DSM 7299 9170852 YP_003654876.1 CDS Arnit_0705 NC_014166.1 686567 686923 D COGs: COG1734 DnaK suppressor protein; InterPro IPR000962:IPR020458; KEGG: abu:Abu_2116 DnaK suppressor protein DksA; PFAM: zinc finger DksA/TraR C4-type; SPTR: A8EWK7 DnaK suppressor protein DksA; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator 686567..686923 Arcobacter nitrofigilis DSM 7299 9170853 YP_003654877.1 CDS Arnit_0706 NC_014166.1 686940 687956 D KEGG: abu:Abu_0449 hypothetical protein; SPTR: A8ES00 Putative uncharacterized protein; hypothetical protein 686940..687956 Arcobacter nitrofigilis DSM 7299 9170854 YP_003654878.1 CDS Arnit_0707 NC_014166.1 687958 688908 D COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269:IPR013785:IPR018517; KEGG: abu:Abu_0450 tRNA-dihydrouridine synthase; PFAM: dihydrouridine synthase DuS; SPTR: A8ES01 Probable tRNA-dihydrouridine synthase; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; dihydrouridine synthase 687958..688908 Arcobacter nitrofigilis DSM 7299 9170855 YP_003654879.1 CDS Arnit_0708 NC_014166.1 688938 689750 D COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456; KEGG: abu:Abu_0451 ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; SPTR: A8ES02 Ribosomal protein L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; 50S ribosomal L11 methyltransferase 688938..689750 Arcobacter nitrofigilis DSM 7299 9170856 YP_003654880.1 CDS Arnit_0709 NC_014166.1 689752 691818 D COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936:IPR011546:IPR003959:IPR000642:IPR 003593:IPR003960; KEGG: abu:Abu_0452 cell division protein FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 FtsH extracellular; peptidase M41; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: A8ES03 Cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; ATP-dependent metalloprotease FtsH 689752..691818 Arcobacter nitrofigilis DSM 7299 9170857 YP_003654881.1 CDS Arnit_0710 NC_014166.1 691811 692386 D KEGG: tdn:Suden_1669 putative phosphatidylserine decarboxylase; SPTR: Q30PY5 Putative phosphatidylserine decarboxylase; hypothetical protein 691811..692386 Arcobacter nitrofigilis DSM 7299 9170858 YP_003654882.1 CDS Arnit_0711 NC_014166.1 692621 694177 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterProIPR000891:IPR005671:IPR013709:IPR013785:IPR 002034; KEGG: abu:Abu_0456 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; SPTR: A8ES07 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase 692621..694177 Arcobacter nitrofigilis DSM 7299 9170859 YP_003654883.1 CDS Arnit_0712 NC_014166.1 694292 696295 D InterPro IPR002187:IPR011435:IPR011322; KEGG: sun:SUN_1865 hypothetical protein; PFAM: protein of unknown function DUF1538; SPTR: B6BH38 Permease, major facilitator superfamily; PFAM: Protein of unknown function (DUF1538); hypothetical protein 694292..696295 Arcobacter nitrofigilis DSM 7299 9170860 YP_003654884.1 CDS Arnit_0713 NC_014166.1 696279 696611 D InterPro IPR012335:IPR012336; KEGG: abu:Abu_0457 hypothetical protein; SPTR: A8ES08 Putative uncharacterized protein; PFAM: Thioredoxin; hypothetical protein 696279..696611 Arcobacter nitrofigilis DSM 7299 9170861 YP_003654885.1 CDS Arnit_0714 NC_014166.1 696612 697031 D KEGG: abu:Abu_0458 hypothetical protein; SPTR: A8ES09 Putative uncharacterized protein; hypothetical protein 696612..697031 Arcobacter nitrofigilis DSM 7299 9170862 YP_003654886.1 CDS Arnit_0715 NC_014166.1 697031 699994 D COGs: COG0249 Mismatch repair ATPase (MutS family); InterProIPR007695:IPR007696:IPR000432:IPR016151:IPR 007860; KEGG: abu:Abu_0459 mismatch repair ATPase; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: A8ES10 Mismatch repair ATPase; PFAM: MutS domain V; Protein of unknown function (DUF968); MutS domain I; MutS domain III; MutS III domain-containing protein 697031..699994 Arcobacter nitrofigilis DSM 7299 9170863 YP_003654887.1 CDS Arnit_0716 NC_014166.1 700005 700826 D COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: mlo:mll5179 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Q98CE8 Mll5179 protein; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 700005..700826 Arcobacter nitrofigilis DSM 7299 9170864 YP_003654888.1 CDS Arnit_0717 NC_014166.1 700869 702287 R COGs: COG0833 Amino acid transporter; InterPro IPR004757:IPR004841:IPR002293; KEGG: mmw:Mmwyl1_0475 ethanolamine transproter; PFAM: amino acid permease-associated region; SPTR: A6VSI3 Ethanolamine transproter; TIGRFAM: ethanolamine transproter; PFAM: Amino acid permease; TIGRFAM: ethanolamine permease; ethanolamine transporter complement(700869..702287) Arcobacter nitrofigilis DSM 7299 9170865 YP_003654889.1 CDS Arnit_0718 NC_014166.1 702300 703190 R COGs: COG4302 Ethanolamine ammonia-lyase small subunit; InterPro IPR009246; KEGG: mmw:Mmwyl1_0476 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain; PRIAM: Ethanolamine ammonia-lyase; SPTR: A0Y3G4 Ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain (EutC); ethanolamine ammonia-lyase complement(702300..703190) Arcobacter nitrofigilis DSM 7299 9170866 YP_003654890.1 CDS Arnit_0719 NC_014166.1 703192 704592 R COGs: COG4303 Ethanolamine ammonia-lyase large subunit; InterPro IPR010628; KEGG: mmw:Mmwyl1_0477 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit; PRIAM: Ethanolamine ammonia-lyase; SPTR: A0Y3G3 Ethanolamine ammonia-lyase, large subunit, heavy chain; PFAM: Ethanolamine ammonia lyase large subunit (EutB); ethanolamine ammonia-lyase complement(703192..704592) Arcobacter nitrofigilis DSM 7299 9170867 YP_003654891.1 CDS Arnit_0720 NC_014166.1 704804 706660 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR007087; KEGG: abu:Abu_0472 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8ES23 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(704804..706660) Arcobacter nitrofigilis DSM 7299 9170868 YP_003654892.1 CDS Arnit_0721 NC_014166.1 706851 707237 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1967 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EW66 Chemotaxis protein CheY; PFAM: Response regulator receiver domain; response regulator receiver protein 706851..707237 Arcobacter nitrofigilis DSM 7299 9170869 YP_003654893.1 CDS Arnit_0722 NC_014166.1 707259 708578 R InterPro IPR011701:IPR016196; KEGG: aeh:Mlg_2061 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Q0A6Y4 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(707259..708578) Arcobacter nitrofigilis DSM 7299 9170870 YP_003654894.1 CDS Arnit_0723 NC_014166.1 708580 709287 R COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR006063:IPR006062:IPR013785:IPR011060; KEGG: abu:Abu_0473 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; SPTR: A8ES24 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(708580..709287) Arcobacter nitrofigilis DSM 7299 9170871 YP_003654895.1 CDS Arnit_0724 NC_014166.1 709303 710154 R COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR001509:IPR013549:IPR016040; KEGG: abu:Abu_0474 hypothetical protein; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: A8ES25 Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777; hypothetical protein complement(709303..710154) Arcobacter nitrofigilis DSM 7299 9170872 YP_003654896.1 CDS Arnit_0725 NC_014166.1 710168 710773 R COGs: COG0118 Glutamine amidotransferase; InterPro IPR017926:IPR010139:IPR000991:IPR016226; KEGG: abu:Abu_0475 glutamine amidotransferase HisH; PFAM: glutamine amidotransferase class-I; SPTR: A8ES26 Glutamine amidotransferase HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase glutamine amidotransferase subunit complement(710168..710773) Arcobacter nitrofigilis DSM 7299 9170873 YP_003654897.1 CDS Arnit_0726 NC_014166.1 710835 711407 R COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: abu:Abu_0476 transformation system protein; PFAM: phosphoribosyltransferase; SPTR: A8ES27 Transformation system protein; PFAM: Phosphoribosyl transferase domain; phosphoribosyltransferase complement(710835..711407) Arcobacter nitrofigilis DSM 7299 9170874 YP_003654898.1 CDS Arnit_0727 NC_014166.1 711549 713810 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_2291 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EX26 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer 711549..713810 Arcobacter nitrofigilis DSM 7299 9170875 YP_003654899.1 CDS Arnit_0728 NC_014166.1 713888 715213 D COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cpb:Cphamn1_1655 multi antimicrobial extrusion protein MatE; PFAM: multi antimicrobial extrusion protein MatE; SPTR: C2A075 Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; MATE efflux family protein 713888..715213 Arcobacter nitrofigilis DSM 7299 9170876 YP_003654900.1 CDS Arnit_0729 NC_014166.1 715253 715891 R COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR012318:IPR014710:IPR011991:IPR018490; KEGG: ccv:CCV52592_1641 hypothetical protein; SPTR: A7GWN7 Putative uncharacterized protein; putative Crp/Fnr family transcriptional regulator complement(715253..715891) Arcobacter nitrofigilis DSM 7299 9170877 YP_003654901.1 CDS Arnit_0730 NC_014166.1 716443 717003 D COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterPro IPR017896:IPR001450:IPR017900; KEGG: cco:CCC13826_1915 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6DB54 HYDROGENASE-3 SMALL SUBUNIT; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 716443..717003 Arcobacter nitrofigilis DSM 7299 9170878 YP_003654902.1 CDS Arnit_0731 NC_014166.1 717014 718975 D COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003916; KEGG: cco:CCC13826_1914 L-alanyl-D-glutamate peptidase; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A6DB53 NADH dehydrogenase (Quinone); PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH/Ubiquinone/plastoquinone complex I 717014..718975 Arcobacter nitrofigilis DSM 7299 9170879 YP_003654903.1 CDS Arnit_0732 NC_014166.1 718986 719909 D COGs: COG0650 Formate hydrogenlyase subunit 4; KEGG: cco:CCC13826_1913 hypothetical protein; SPTR: A7ZBL0 Hydrogenase-4 component C; PFAM: NADH dehydrogenase; hypothetical protein 718986..719909 Arcobacter nitrofigilis DSM 7299 9170880 YP_003654904.1 CDS Arnit_0733 NC_014166.1 719911 720558 D COGs: COG4237 Hydrogenase 4 membrane component (E); InterPro IPR001133; KEGG: ccv:CCV52592_1039 hydrogenase 4 membrane subunit; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: A7GWM9 Hydrogenase-4 component E; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 719911..720558 Arcobacter nitrofigilis DSM 7299 9170881 YP_003654905.1 CDS Arnit_0734 NC_014166.1 720562 722046 D COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003916; KEGG: cco:CCC13826_1911 hypothetical protein; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A7ZBL2 Hydrogenase-4 component F; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH/Ubiquinone/plastoquinone complex I 720562..722046 Arcobacter nitrofigilis DSM 7299 9170882 YP_003654906.1 CDS Arnit_0735 NC_014166.1 722058 723797 D COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001268:IPR001501:IPR001135; KEGG: cco:CCC13826_0711 DNA-3-methyladenine glycosylase I; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; SPTR: A7ZBL3 Hydrogenase-4 component G; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase; NADH dehydrogenase 722058..723797 Arcobacter nitrofigilis DSM 7299 9170883 YP_003654907.1 CDS Arnit_0736 NC_014166.1 723807 724343 D COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017896:IPR001450:IPR009051:IPR017900; KEGG: wsu:WS1837 formate hydrogenlyase complex iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1ZZE5 NADH:ubiquinone oxidoreductase chain I-like protein; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 723807..724343 Arcobacter nitrofigilis DSM 7299 9170884 YP_003654908.1 CDS Arnit_0737 NC_014166.1 724340 725155 D COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137:IPR006138; KEGG: cco:CCC13826_0713 hydrogenase-4 component I; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: A7ZBL5 Hydrogenase-4 component I; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 724340..725155 Arcobacter nitrofigilis DSM 7299 9170885 YP_003654909.1 CDS Arnit_0738 NC_014166.1 725166 725513 D InterPro IPR010005; KEGG: cco:CCC13826_0714 hypothetical protein; SPTR: C8PJ86 Putative uncharacterized protein; PFAM: Formate hydrogenlyase maturation protein HycH; hypothetical protein 725166..725513 Arcobacter nitrofigilis DSM 7299 9170886 YP_003654910.1 CDS Arnit_0739 NC_014166.1 725510 725962 D InterPro IPR000671; KEGG: wsu:WS1834 hypothetical protein; PFAM: peptidase M52 hydrogen uptake protein; SPTR: C6RGQ3 Hydrogenase maturation protease family protein; TIGRFAM: hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; hydrogenase maturation protease 725510..725962 Arcobacter nitrofigilis DSM 7299 9170887 YP_003654911.1 CDS Arnit_0740 NC_014166.1 725977 726831 D COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: cco:CCC13826_0716 formate/nitrite transporter; PFAM: formate/nitrite transporter; SPTR: A7ZBL8 Formate/nitrite transporter; PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate/nitrite transporter 725977..726831 Arcobacter nitrofigilis DSM 7299 9170888 YP_003654912.1 CDS Arnit_0741 NC_014166.1 726845 729097 D COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006478:IPR006963:IPR006656:IPR006657:IPR 009010; KEGG: cco:CCC13826_2031 putative Myb2 protein; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: C8PJ76 Formate dehydrogenase H; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; formate dehydrogenase subunit alpha 726845..729097 Arcobacter nitrofigilis DSM 7299 9170889 YP_003654913.1 CDS Arnit_0742 NC_014166.1 729211 729384 R KEGG: hypothetical protein; SPTR: A2TYZ8 Thioredoxin family protein; hypothetical protein complement(729211..729384) Arcobacter nitrofigilis DSM 7299 9170890 YP_003654914.1 CDS Arnit_0743 NC_014166.1 729567 730013 D KEGG: abu:Abu_0477 hypothetical protein; SPTR: A8ES28 Putative uncharacterized protein; hypothetical protein 729567..730013 Arcobacter nitrofigilis DSM 7299 9170891 YP_003654915.1 CDS Arnit_0744 NC_014166.1 730139 731926 R COGs: COG0481 Membrane GTPase LepA; InterProIPR005225:IPR006297:IPR000795:IPR004161:IPR 000640:IPR013842:IPR009022:IPR009000; KEGG: abu:Abu_0478 GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SPTR: A8ES29 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein LepA complement(730139..731926) Arcobacter nitrofigilis DSM 7299 9170892 YP_003654916.1 CDS Arnit_0745 NC_014166.1 732040 733071 R COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR003367:IPR006664; KEGG: abu:Abu_0481 outer membrane fibronectin-binding protein; PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat; SPTR: A8ES32 Outer membrane fibronectin-binding protein; PFAM: OmpA family; OmpA/MotB domain-containing protein complement(732040..733071) Arcobacter nitrofigilis DSM 7299 9170893 YP_003654917.1 CDS Arnit_0746 NC_014166.1 733101 734036 R COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946:IPR000836; KEGG: abu:Abu_0482 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: A8ES33 Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase complement(733101..734036) Arcobacter nitrofigilis DSM 7299 9170894 YP_003654918.1 CDS Arnit_0747 NC_014166.1 734111 735151 R COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506:IPR018318:IPR014729; KEGG: abu:Abu_0484 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA methyl transferase-like; SPTR: A8ES35 tRNA-specific 2-thiouridylase mnmA 1; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase complement(734111..735151) Arcobacter nitrofigilis DSM 7299 9170895 YP_003654919.1 CDS Arnit_0748 NC_014166.1 735160 736290 R COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506:IPR018318:IPR014729; KEGG: abu:Abu_0485 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; SPTR: A8ES36 tRNA-specific 2-thiouridylase mnmA 2; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase complement(735160..736290) Arcobacter nitrofigilis DSM 7299 9170896 YP_003654920.1 CDS Arnit_0749 NC_014166.1 736333 736824 R COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550:IPR002052; KEGG: abu:Abu_0486 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; SPTR: A8ES37 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(736333..736824) Arcobacter nitrofigilis DSM 7299 9170897 YP_003654921.1 CDS Arnit_0750 NC_014166.1 736904 737926 R COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994:IPR001131; KEGG: abu:Abu_0487 prolidase (Xaa-Pro dipeptidase) (PepQ); PFAM: peptidase M24; SPTR: A8ES38 Prolidase (Xaa-Pro dipeptidase) (PepQ); PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; peptidase M24 complement(736904..737926) Arcobacter nitrofigilis DSM 7299 9170898 YP_003654922.1 CDS Arnit_0751 NC_014166.1 737990 738472 D COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874:IPR018509; KEGG: abu:Abu_0488 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: A8ES39 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 737990..738472 Arcobacter nitrofigilis DSM 7299 9170899 YP_003654923.1 CDS Arnit_0752 NC_014166.1 738475 739701 D COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: abu:Abu_0489 chlorohydrolase; PFAM: amidohydrolase; SPTR: A8ES40 Amidohydrolase family protein; PFAM: Amidohydrolase family; amidohydrolase 738475..739701 Arcobacter nitrofigilis DSM 7299 9170900 YP_003654924.1 CDS Arnit_0753 NC_014166.1 739694 740581 D COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004635:IPR002142; KEGG: abu:Abu_0490 protease IV (PspA); PFAM: peptidase S49; SPTR: A8ES41 Protease IV (PspA); TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type 739694..740581 Arcobacter nitrofigilis DSM 7299 9170901 YP_003654925.1 CDS Arnit_0754 NC_014166.1 740779 741978 R COGs: COG0282 Acetate kinase; InterPro IPR004372:IPR000890; KEGG: abu:Abu_0492 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: A8ES43 Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase complement(740779..741978) Arcobacter nitrofigilis DSM 7299 9170902 YP_003654926.1 CDS Arnit_0755 NC_014166.1 742007 743005 R COGs: COG0280 Phosphotransacetylase; InterPro IPR004614:IPR002505:IPR012147; KEGG: abu:Abu_0493 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; SPTR: A8ES44 Phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; phosphate acetyltransferase complement(742007..743005) Arcobacter nitrofigilis DSM 7299 9170903 YP_003654927.1 CDS Arnit_0756 NC_014166.1 743239 743553 R KEGG: wsu:WS1017 hypothetical protein; SPTR: C1SLV6 Putative uncharacterized protein; hypothetical protein complement(743239..743553) Arcobacter nitrofigilis DSM 7299 9170904 YP_003654928.1 CDS Arnit_0757 NC_014166.1 743652 744653 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057; KEGG: wsu:WS0114 putative transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: Q8RSF6 Putative transcriptional regulator protein; helix-turn-helix, AraC domain-containing protein 743652..744653 Arcobacter nitrofigilis DSM 7299 9170905 YP_003654929.1 CDS Arnit_0758 NC_014166.1 744654 745850 R COGs: COG0282 Acetate kinase; InterPro IPR004372:IPR000890; KEGG: abu:Abu_0494 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: A8ES45 Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase complement(744654..745850) Arcobacter nitrofigilis DSM 7299 9170906 YP_003654930.1 CDS Arnit_0759 NC_014166.1 745938 746568 R KEGG: abu:Abu_0503 DNA polymerase III, epsilon subunit; SPTR: A8ES54 DNA polymerase III, epsilon subunit; PFAM: Exonuclease; DNA polymerase III subunit epsilon complement(join(745938..746432,746434..746568)) Arcobacter nitrofigilis DSM 7299 9170907 YP_003654931.1 CDS Arnit_0760 NC_014166.1 746568 748385 R COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterProIPR000595:IPR000644:IPR005105:IPR018821:IPR 014710:IPR018490; KEGG: abu:Abu_0504 cyclic nucleotide-binding domain-containing protein; PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; CBS domain containing protein; cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein; SPTR: A8ES55 Cyclic nucleotide-binding domain protein; PFAM: CBS domain; Putative nucleotidyltransferase substrate binding domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; putative cyclic nucleotide-regulated nucleotidyltransferase complement(746568..748385) Arcobacter nitrofigilis DSM 7299 9170908 YP_003654932.1 CDS Arnit_0761 NC_014166.1 748507 750360 R COGs: COG4147 symporter; InterPro IPR001734:IPR019899:IPR018212; KEGG: paa:Paes_1651 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Q2BJ80 Sodium:solute symporter family protein; TIGRFAM: putative sodium symporter protein; PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; putative sodium symporter protein complement(748507..750360) Arcobacter nitrofigilis DSM 7299 9170909 YP_003654933.1 CDS Arnit_0762 NC_014166.1 750373 750627 R COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: abu:Abu_0506 hypothetical protein; SPTR: A8ES57 Putative uncharacterized protein; TIGRFAM: putative solute symporter protein; TIGRFAM: probable solute:sodium symporter small subunit; putative solute symporter protein complement(750373..750627) Arcobacter nitrofigilis DSM 7299 9170910 YP_003654934.1 CDS Arnit_0763 NC_014166.1 750803 751465 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: abu:Abu_0507 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ES58 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(750803..751465) Arcobacter nitrofigilis DSM 7299 9170911 YP_003654935.1 CDS Arnit_0764 NC_014166.1 751446 752990 R COGs: COG4564 Signal transduction histidine kinase; InterProIPR005467:IPR013163:IPR003661:IPR003594:IPR 009082; KEGG: abu:Abu_0508 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Cache type 2 domain protein; SMART: histidine kinase A domain protein; SPTR: A8ES59 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase complement(751446..752990) Arcobacter nitrofigilis DSM 7299 9170912 YP_003654936.1 CDS Arnit_0765 NC_014166.1 753837 754343 R COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR008136; KEGG: abu:Abu_0517 CinA-like protein; PFAM: CinA domain protein; SPTR: A8ES60 CinA-like protein; PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; CinA domain-containing protein complement(753837..754343) Arcobacter nitrofigilis DSM 7299 9170921 YP_003654937.1 CDS Arnit_0766 NC_014166.1 754416 755768 R COGs: COG0579 dehydrogenase; InterPro IPR006076; KEGG: abu:Abu_0518 malate:quinone oxidoreductase; PFAM: FAD dependent oxidoreductase; PRIAM: Malate dehydrogenase (acceptor); SPTR: A8ES61 Malate:quinone oxidoreductase; PFAM: FAD dependent oxidoreductase; malate dehydrogenase complement(754416..755768) Arcobacter nitrofigilis DSM 7299 9170922 YP_003654938.1 CDS Arnit_0767 NC_014166.1 756098 758824 D COGs: COG0060 Isoleucyl-tRNA synthetase; InterProIPR002301:IPR002300:IPR013155:IPR010663:IPR 015905:IPR014729:IPR009080:IPR009008:IPR001412; KEGG: abu:Abu_0519 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; zinc finger Fpg domain protein; SPTR: A8ES62 Isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 756098..758824 Arcobacter nitrofigilis DSM 7299 9170923 YP_003654939.1 CDS Arnit_0768 NC_014166.1 758830 758940 D SPTR: Q25657 Apical membrane antigen-1; hypothetical protein 758830..758940 Arcobacter nitrofigilis DSM 7299 9170924 YP_003654940.1 CDS Arnit_0769 NC_014166.1 758952 759230 D COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: abu:Abu_0520 NifU-like protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: A8ES63 Conserved hypothetical NifU-like protein; PFAM: NifU-like domain; nitrogen-fixing NifU domain-containing protein 758952..759230 Arcobacter nitrofigilis DSM 7299 9170925 YP_003654941.1 CDS Arnit_0770 NC_014166.1 759230 759823 D KEGG: abu:Abu_0521 hypothetical protein; SPTR: A8ES64 Putative uncharacterized protein; hypothetical protein 759230..759823 Arcobacter nitrofigilis DSM 7299 9170926 YP_003654942.1 CDS Arnit_0771 NC_014166.1 759804 761081 D COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR005761:IPR013221:IPR004101:IPR018109; KEGG: abu:Abu_0522 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8ES65 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases; UDP-N-acetylmuramyl tripeptide synthetase 759804..761081 Arcobacter nitrofigilis DSM 7299 9170927 YP_003654943.1 CDS Arnit_0772 NC_014166.1 761072 761881 R KEGG: cco:CCC13826_0148 hypothetical protein; SPTR: A7ZD70 Putative vesicular transport factor Uso1p; hypothetical protein complement(761072..761881) Arcobacter nitrofigilis DSM 7299 9170928 YP_003654944.1 CDS Arnit_0773 NC_014166.1 761936 762841 R InterPro IPR002035; KEGG: nis:NIS_0403 von Willebrand factor type A domain-containing protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: A6Q208 von Willebrand factor type A domain protein; PFAM: von Willebrand factor type A domain; von Willebrand factor type A complement(761936..762841) Arcobacter nitrofigilis DSM 7299 9170929 YP_003654945.1 CDS Arnit_0774 NC_014166.1 762834 763217 R KEGG: sun:SUN_2004 hypothetical protein; SPTR: A6QBT7 Putative uncharacterized protein; hypothetical protein complement(762834..763217) Arcobacter nitrofigilis DSM 7299 9170930 YP_003654946.1 CDS Arnit_0775 NC_014166.1 763317 764051 R COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: tdn:Suden_0654 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Q30SU8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF58; hypothetical protein complement(763317..764051) Arcobacter nitrofigilis DSM 7299 9170931 YP_003654947.1 CDS Arnit_0776 NC_014166.1 764055 765005 R COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR016366; KEGG: nis:NIS_0400 AAA family ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: A6Q205 ATPase, AAA family; PFAM: ATPase family associated with various cellular activities (AAA); ATPase complement(764055..765005) Arcobacter nitrofigilis DSM 7299 9170932 YP_003654948.1 CDS Arnit_0777 NC_014166.1 765316 765891 D InterPro IPR003782:IPR012335:IPR012336; KEGG: cco:CCC13826_0870 SCO1/SenC family protein; PFAM: electron transport protein SCO1/SenC; SPTR: B6BJP0 SCO1/SenC superfamily; PFAM: SCO1/SenC; electron transport protein SCO1/SenC 765316..765891 Arcobacter nitrofigilis DSM 7299 9170933 YP_003654949.1 CDS Arnit_0778 NC_014166.1 765884 767698 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004090; KEGG: abu:Abu_0789 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESY0 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 765884..767698 Arcobacter nitrofigilis DSM 7299 9170934 YP_003654950.1 CDS Arnit_0779 NC_014166.1 767894 768694 D COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865:IPR018130; KEGG: abu:Abu_0540 30S ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: A8ES83 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 767894..768694 Arcobacter nitrofigilis DSM 7299 9170935 YP_003654951.1 CDS Arnit_0780 NC_014166.1 768696 769742 D COGs: COG0264 Translation elongation factor Ts; InterProIPR001816:IPR000449:IPR014039:IPR009060:IPR 018101; KEGG: abu:Abu_0541 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; SPTR: A8ES84 Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts 768696..769742 Arcobacter nitrofigilis DSM 7299 9170936 YP_003654952.1 CDS Arnit_0781 NC_014166.1 769807 770460 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: abu:Abu_0542 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ES85 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 769807..770460 Arcobacter nitrofigilis DSM 7299 9170937 YP_003654953.1 CDS Arnit_0782 NC_014166.1 770457 771245 D KEGG: abu:Abu_0543 hypothetical protein; SPTR: A8ES86 Putative uncharacterized protein; hypothetical protein 770457..771245 Arcobacter nitrofigilis DSM 7299 9170938 YP_003654954.1 CDS Arnit_0783 NC_014166.1 771255 771872 D COGs: COG0194 Guanylate kinase; InterPro IPR008144:IPR017665:IPR008145:IPR020590; KEGG: abu:Abu_0544 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: A8ES87 Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase 771255..771872 Arcobacter nitrofigilis DSM 7299 9170939 YP_003654955.1 CDS Arnit_0784 NC_014166.1 771869 773488 R COGs: COG2200 FOG: EAL domain; InterPro IPR001789:IPR001633:IPR000160:IPR011006; KEGG: abu:Abu_0545 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; response regulator receiver; GGDEF domain containing protein; SMART: EAL domain protein; response regulator receiver; GGDEF domain containing protein; SPTR: A8ES88 EAL/GGDEF domain protein; PFAM: EAL domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase/phosphodiesterase complement(771869..773488) Arcobacter nitrofigilis DSM 7299 9170940 YP_003654956.1 CDS Arnit_0785 NC_014166.1 773586 776024 D COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR006403:IPR006416:IPR001757:IPR 008250:IPR005834:IPR001756:IPR001877:IPR018303; KEGG: abu:Abu_0546 cation-transporting ATPase, P-type; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: A8ES89 Cation-transporting ATPase, P-type; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase 773586..776024 Arcobacter nitrofigilis DSM 7299 9170941 YP_003654957.1 CDS Arnit_0786 NC_014166.1 776025 776252 D InterPro IPR004714; KEGG: abu:Abu_0547 hypothetical protein; PFAM: cytochrome oxidase maturation protein cbb3-type; SPTR: A8ES90 Putative uncharacterized protein; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 776025..776252 Arcobacter nitrofigilis DSM 7299 9170942 YP_003654958.1 CDS Arnit_0787 NC_014166.1 776280 776561 R InterPro IPR009056; KEGG: sun:SUN_0302 periplasmic nitrate reductase, small subunit; SPTR: A6Q703 Periplasmic nitrate reductase, small subunit; periplasmic nitrate reductase small subunit complement(776280..776561) Arcobacter nitrofigilis DSM 7299 9170943 YP_003654959.1 CDS Arnit_0788 NC_014166.1 776692 777291 D COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003593; KEGG: tdn:Suden_0485 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B6BMG0 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 776692..777291 Arcobacter nitrofigilis DSM 7299 9170944 YP_003654960.1 CDS Arnit_0789 NC_014166.1 777284 778213 D COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015:IPR019772; KEGG: abu:Abu_0550 ferrochelatase; PFAM: ferrochelatase; PRIAM: Ferrochelatase; SPTR: A8ES93 Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; ferrochelatase 777284..778213 Arcobacter nitrofigilis DSM 7299 9170945 YP_003654961.1 CDS Arnit_0790 NC_014166.1 778223 778768 D COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: nam:NAMH_1747 hypothetical protein; PFAM: AMMECR1 domain protein; SPTR: B9L6Y4 Putative uncharacterized protein; PFAM: AMMECR1; TIGRFAM: conserved hypothetical protein TIGR00296; AMMECR1 domain-containing protein 778223..778768 Arcobacter nitrofigilis DSM 7299 9170946 YP_003654962.1 CDS Arnit_0791 NC_014166.1 778765 779562 D COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: sun:SUN_0977 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: C1ZYW0 Predicted dioxygenase; PFAM: Memo-like protein; hypothetical protein 778765..779562 Arcobacter nitrofigilis DSM 7299 9170947 YP_003654963.1 CDS Arnit_0792 NC_014166.1 779552 780259 D COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: abu:Abu_0553 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: A8ES96 Putative uncharacterized protein; PFAM: DUF218 domain; hypothetical protein 779552..780259 Arcobacter nitrofigilis DSM 7299 9170948 YP_003654964.1 CDS Arnit_0793 NC_014166.1 780297 781145 D COGs: COG2996 conserved hypothetical protein; InterPro IPR016027:IPR014464; KEGG: abu:Abu_0556 hypothetical protein; SPTR: A8ES99 Putative uncharacterized protein; PFAM: S1 RNA binding domain; hypothetical protein 780297..781145 Arcobacter nitrofigilis DSM 7299 9170949 YP_003654965.1 CDS Arnit_0794 NC_014166.1 781234 781758 D COGs: COG2077 Peroxiredoxin; InterProIPR017936:IPR013740:IPR012335:IPR012336:IPR 018219; KEGG: abu:Abu_0557 thiol peroxidase; PFAM: Redoxin domain protein; SPTR: A8ESA0 Thiol peroxidase; PFAM: Redoxin; redoxin domain-containing protein 781234..781758 Arcobacter nitrofigilis DSM 7299 9170950 YP_003654966.1 CDS Arnit_0795 NC_014166.1 781819 783009 D COGs: COG3213 Uncharacterized protein involved in response to NO; KEGG: abu:Abu_0560 hypothetical protein; SPTR: A8ESA3 Putative uncharacterized protein; PFAM: NnrS protein; hypothetical protein 781819..783009 Arcobacter nitrofigilis DSM 7299 9170951 YP_003654967.1 CDS Arnit_0796 NC_014166.1 783078 784016 D COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: abu:Abu_0561 putative sulfite oxidase subunit YedY; PFAM: oxidoreductase molybdopterin binding; SPTR: A8ESA4 Oxidoreductase, molybdopterin binding; PFAM: Oxidoreductase molybdopterin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; oxidoreductase molybdopterin binding protein 783078..784016 Arcobacter nitrofigilis DSM 7299 9170952 YP_003654968.1 CDS Arnit_0797 NC_014166.1 784016 784558 D COGs: COG2717 membrane protein; InterPro IPR013130; KEGG: abu:Abu_0562 hypothetical protein; PFAM: Ferric reductase domain protein transmembrane component domain; SPTR: A8ESA5 Conserved hypothetical membrane protein; PFAM: Ferric reductase like transmembrane component; ferric reductase domain-containing protein transmembrane component domain-containing protein 784016..784558 Arcobacter nitrofigilis DSM 7299 9170953 YP_003654969.1 CDS Arnit_0798 NC_014166.1 784550 786199 R COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953:IPR000172; KEGG: sun:SUN_2354 oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A6QCT1 Oxidoreductase; PFAM: GMC oxidoreductase; glucose-methanol-choline oxidoreductase complement(784550..786199) Arcobacter nitrofigilis DSM 7299 9170954 YP_003654970.1 CDS Arnit_0799 NC_014166.1 786189 786683 R KEGG: sun:SUN_2353 hypothetical protein; SPTR: Q1PWT4 Putative uncharacterized protein; hypothetical protein complement(786189..786683) Arcobacter nitrofigilis DSM 7299 9170955 YP_003654971.1 CDS Arnit_0800 NC_014166.1 786815 788857 D COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: abu:Abu_0563 ATP-dependent DNA helicase UvrD; PFAM: UvrD/REP helicase; SPTR: A8ESA6 ATP-dependent DNA helicase, UvrD/Rep family; PFAM: UvrD/REP helicase; UvrD/REP helicase 786815..788857 Arcobacter nitrofigilis DSM 7299 9170956 YP_003654972.1 CDS Arnit_0801 NC_014166.1 788972 791689 D COGs: COG2200 FOG: EAL domain; InterProIPR000014:IPR000700:IPR001633:IPR000160:IPR 004010:IPR013163:IPR013655; KEGG: pin:Ping_1204 sensor histidine kinase PAS domain-containing protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; Cache type 2 domain protein; Cache domain protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: C1SJV9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS/PAC sensor-containg diguanylate cyclase/phosphodiesterase 788972..791689 Arcobacter nitrofigilis DSM 7299 9170957 YP_003654973.1 CDS Arnit_0802 NC_014166.1 791686 792786 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: pin:Ping_2702 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A1SY47 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(791686..792786) Arcobacter nitrofigilis DSM 7299 9170958 YP_003654974.1 CDS Arnit_0803 NC_014166.1 792914 795562 D COGs: COG0525 Valyl-tRNA synthetase; InterProIPR002303:IPR002300:IPR013155:IPR019499:IPR 019754:IPR014729:IPR009008:IPR009080:IPR010978:IPR001412; KEGG: abu:Abu_0581 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: A8ESC4 Valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: putative zinc finger domain, LRP1 type; valyl-tRNA synthetase; valyl-tRNA synthetase 792914..795562 Arcobacter nitrofigilis DSM 7299 9170959 YP_003654975.1 CDS Arnit_0804 NC_014166.1 796191 796349 R KEGG: sun:SUN_0191 hypothetical protein; SPTR: A6Q6P2 Putative uncharacterized protein; hypothetical protein complement(796191..796349) Arcobacter nitrofigilis DSM 7299 9170960 YP_003654976.1 CDS Arnit_0805 NC_014166.1 796360 797823 R COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: tdn:Suden_0619 sulfide-quinone reductase, putative; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q30SY3 Sulfide: quinone oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(796360..797823) Arcobacter nitrofigilis DSM 7299 9170961 YP_003654977.1 CDS Arnit_0806 NC_014166.1 797983 798795 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: tdn:Suden_0878 secretion protein HlyD; PFAM: secretion protein HlyD family protein; SPTR: Q30S75 Secretion protein HlyD; PFAM: HlyD family secretion protein; secretion protein HlyD family protein 797983..798795 Arcobacter nitrofigilis DSM 7299 9170962 YP_003654978.1 CDS Arnit_0807 NC_014166.1 798797 800344 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: tdn:Suden_0877 AcrB/AcrD/AcrF family protein; PFAM: acriflavin resistance protein; SPTR: Q30S76 AcrB/AcrD/AcrF family protein; PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein 798797..800344 Arcobacter nitrofigilis DSM 7299 9170963 YP_003654979.1 CDS Arnit_0808 NC_014166.1 800344 801987 D COGs: COG0841 Cation/multidrug efflux pump; KEGG: sun:SUN_0555 acriflavin resistance AcrB/AcrD/AcrF family protein; SPTR: B6BLH4 Cation efflux system; PFAM: AcrB/AcrD/AcrF family; acriflavin resistance AcrB/AcrD/AcrF family protein 800344..801987 Arcobacter nitrofigilis DSM 7299 9170964 YP_003654980.1 CDS Arnit_0809 NC_014166.1 802229 802675 D KEGG: sdn:Sden_0080 hypothetical protein; SPTR: Q12T49 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2846); hypothetical protein 802229..802675 Arcobacter nitrofigilis DSM 7299 9170965 YP_003654981.1 CDS Arnit_0810 NC_014166.1 802803 803108 D InterPro IPR012577; KEGG: vap:Vapar_2502 NIPSNAP family containing protein; PFAM: NIPSNAP family containing protein; SPTR: Q2BJ33 Putative uncharacterized protein; PFAM: NIPSNAP; NIPSNAP family containing protein 802803..803108 Arcobacter nitrofigilis DSM 7299 9170966 YP_003654982.1 CDS Arnit_0811 NC_014166.1 803240 803779 R InterPro IPR001647:IPR012287:IPR009057; KEGG: abu:Abu_2225 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8EWW5 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator complement(803240..803779) Arcobacter nitrofigilis DSM 7299 9170967 YP_003654983.1 CDS Arnit_0812 NC_014166.1 803883 805037 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: abu:Abu_2224 HlyD family multidrug efflux protein; PFAM: secretion protein HlyD family protein; SPTR: A8EWW4 Multidrug efflux protein, HlyD family; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter 803883..805037 Arcobacter nitrofigilis DSM 7299 9170968 YP_003654984.1 CDS Arnit_0813 NC_014166.1 805034 808171 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: abu:Abu_2223 Acr family multidrug efflux protein; PFAM: acriflavin resistance protein; SPTR: A8EWW3 Multidrug efflux protein, Acr family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux transporter 805034..808171 Arcobacter nitrofigilis DSM 7299 9170969 YP_003654985.1 CDS Arnit_0814 NC_014166.1 808164 809552 D COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: abu:Abu_2222 outer membrane efflux lipoprotein; PFAM: outer membrane efflux protein; SPTR: A8EWW2 Outer membrane efflux lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 808164..809552 Arcobacter nitrofigilis DSM 7299 9170970 YP_003654986.1 CDS Arnit_0815 NC_014166.1 809575 810483 R COGs: COG1897 Homoserine trans-succinylase; InterPro IPR005697; KEGG: cce:Ccel_3331 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; PRIAM: Homoserine O-succinyltransferase; SPTR: B8I164 Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase complement(809575..810483) Arcobacter nitrofigilis DSM 7299 9170971 YP_003654987.1 CDS Arnit_0816 NC_014166.1 810629 811402 D KEGG: pin:Ping_1556 putative lipoprotein; SPTR: C1ZZB8 Putative uncharacterized protein; hypothetical protein 810629..811402 Arcobacter nitrofigilis DSM 7299 9170972 YP_003654988.1 CDS Arnit_0817 NC_014166.1 811405 814491 R COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: sun:SUN_0473 cation efflux transporter; PFAM: acriflavin resistance protein; SPTR: A6Q7H4 Cation/multidrug efflux transporter, RND superfamily; PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein complement(811405..814491) Arcobacter nitrofigilis DSM 7299 9170973 YP_003654989.1 CDS Arnit_0818 NC_014166.1 814573 816798 R COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR003660:IPR000160; KEGG: tdn:Suden_1196 diguanylate phosphodiesterase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: C0N243 HAMP domain protein; PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(814573..816798) Arcobacter nitrofigilis DSM 7299 9170974 YP_003654990.1 CDS Arnit_0819 NC_014166.1 816811 817458 R COGs: COG3672 periplasmic protein; InterPro IPR010319; KEGG: dps:DP0518 hypothetical protein; PFAM: transglutaminase family protein cysteine peptidase BTLCP; SPTR: Q6AQX7 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF920); transglutaminase complement(816811..817458) Arcobacter nitrofigilis DSM 7299 9170975 YP_003654991.1 CDS Arnit_0820 NC_014166.1 817460 818773 R COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: abu:Abu_0585 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ESC8 Major facilitator superfamily transporter; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(817460..818773) Arcobacter nitrofigilis DSM 7299 9170976 YP_003654992.1 CDS Arnit_0821 NC_014166.1 818850 819440 D COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637; KEGG: abu:Abu_0586 HAM1-like protein; PFAM: Ham1 family protein; PRIAM: Nucleoside-triphosphatase; SPTR: A8ESC9 Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 818850..819440 Arcobacter nitrofigilis DSM 7299 9170977 YP_003654993.1 CDS Arnit_0822 NC_014166.1 819435 819797 R KEGG: abu:Abu_0587 hypothetical protein; SPTR: A8ESD0 Putative uncharacterized protein; hypothetical protein complement(819435..819797) Arcobacter nitrofigilis DSM 7299 9170978 YP_003654994.1 CDS Arnit_0823 NC_014166.1 819794 820144 R InterPro IPR012902; KEGG: abu:Abu_0588 hypothetical protein; SPTR: A8ESD1 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(819794..820144) Arcobacter nitrofigilis DSM 7299 9170979 YP_003654995.1 CDS Arnit_0824 NC_014166.1 820128 820373 R KEGG: abu:Abu_0589 hypothetical protein; SPTR: A8ESD2 Putative uncharacterized protein; hypothetical protein complement(820128..820373) Arcobacter nitrofigilis DSM 7299 9170980 YP_003654996.1 CDS Arnit_0825 NC_014166.1 820402 821166 R COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304:IPR004455:IPR016040; KEGG: abu:Abu_0590 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: A8ESD3 Pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase complement(820402..821166) Arcobacter nitrofigilis DSM 7299 9170981 YP_003654997.1 CDS Arnit_0826 NC_014166.1 821258 821926 D COGs: COG4105 DNA uptake lipoprotein; KEGG: abu:Abu_0591 hypothetical protein; SPTR: A8ESD4 Conserved hypothetical membrane protein; hypothetical protein 821258..821926 Arcobacter nitrofigilis DSM 7299 9170982 YP_003654998.1 CDS Arnit_0827 NC_014166.1 821955 824372 D COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815:IPR003111:IPR003959:IPR008269:IPR 001984:IPR020568:IPR003593:IPR008268; KEGG: abu:Abu_0592 ATP-dependent protease La; PFAM: AAA ATPase central domain protein; peptidase S16 lon domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: A8ESD5 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP-dependent protease La 821955..824372 Arcobacter nitrofigilis DSM 7299 9170983 YP_003654999.1 CDS Arnit_0828 NC_014166.1 824377 824958 D KEGG: abu:Abu_1148 hypothetical protein; SPTR: A8ETY4 Putative uncharacterized protein; hypothetical protein 824377..824958 Arcobacter nitrofigilis DSM 7299 9170984 YP_003655000.1 CDS Arnit_0829 NC_014166.1 824948 825475 D InterPro IPR002610; KEGG: abu:Abu_0593 rhomboid-like protein; PFAM: Rhomboid family protein; SPTR: A8ESD6 Rhomboid-like protein; PFAM: Rhomboid family; rhomboid family protein 824948..825475 Arcobacter nitrofigilis DSM 7299 9170985 YP_003655001.1 CDS Arnit_0830 NC_014166.1 825742 827007 D COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR017963:IPR001126; KEGG: abu:Abu_1492 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: A8EUX3 DNA polymerase IV; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; DNA-directed DNA polymerase 825742..827007 Arcobacter nitrofigilis DSM 7299 9170986 YP_003655002.1 CDS Arnit_0831 NC_014166.1 827073 827474 D COGs: COG5485 ester cyclase; InterPro IPR009959; KEGG: abu:Abu_2016 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: A8EWB0 Putative uncharacterized protein; PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related; hypothetical protein 827073..827474 Arcobacter nitrofigilis DSM 7299 9170987 YP_003655003.1 CDS Arnit_0832 NC_014166.1 827474 828250 D COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: tdn:Suden_1691 Mg2+ transporter protein, CorA-like; PFAM: Mg2 transporter protein CorA family protein; SPTR: B6BJC4 CorA-like Mg2+ transporter protein; PFAM: CorA-like Mg2+ transporter protein; Mg2 transporter protein CorA family protein 827474..828250 Arcobacter nitrofigilis DSM 7299 9170988 YP_003655004.1 CDS Arnit_0833 NC_014166.1 828258 829304 R InterPro IPR008007; KEGG: tdn:Suden_1689 peptidase M42; PFAM: peptidase M42 family protein; SPTR: B6BHI8 Peptidase M42; PFAM: M42 glutamyl aminopeptidase; peptidase M42 family protein complement(828258..829304) Arcobacter nitrofigilis DSM 7299 9170989 YP_003655005.1 CDS Arnit_0834 NC_014166.1 829306 830352 R COGs: COG3608 deacylase; InterPro IPR007036; KEGG: tdn:Suden_1688 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Q30PW6 Succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; succinylglutamate desuccinylase/aspartoacylase complement(829306..830352) Arcobacter nitrofigilis DSM 7299 9170990 YP_003655006.1 CDS Arnit_0835 NC_014166.1 830358 831290 R COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761:IPR004666:IPR013651:IPR013816; KEGG: abu:Abu_2188 ribosomal protein S6 modification protein; PFAM: RimK domain protein ATP-grasp; SPTR: B6BHI6 S6 modification enzyme RimK; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; alpha-L-glutamate ligase complement(830358..831290) Arcobacter nitrofigilis DSM 7299 9170991 YP_003655007.1 CDS Arnit_0836 NC_014166.1 831292 831717 R COGs: COG4067 conserved hypothetical protein; InterPro IPR008503; KEGG: tdn:Suden_1686 hypothetical protein; PFAM: protein of unknown function DUF785; SPTR: Q30PW8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF785); hypothetical protein complement(831292..831717) Arcobacter nitrofigilis DSM 7299 9170992 YP_003655008.1 CDS Arnit_0837 NC_014166.1 831850 832461 R COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: abu:Abu_2151 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: A8EWP2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477); hypothetical protein complement(831850..832461) Arcobacter nitrofigilis DSM 7299 9170993 YP_003655009.1 CDS Arnit_0838 NC_014166.1 832461 833387 R COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: abu:Abu_2152 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: A8EWP3 Conserved hypothetical membrane protein (DUF477); PFAM: Domain of unknown function (DUF477); hypothetical protein complement(832461..833387) Arcobacter nitrofigilis DSM 7299 9170994 YP_003655010.1 CDS Arnit_0839 NC_014166.1 833388 833978 R COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: abu:Abu_2150 LemA protein; PFAM: LemA family protein; SPTR: A8EWP1 LemA protein; PFAM: LemA family; LemA family protein complement(833388..833978) Arcobacter nitrofigilis DSM 7299 9170995 YP_003655011.1 CDS Arnit_0840 NC_014166.1 834298 836409 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_1749 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EVM3 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer complement(834298..836409) Arcobacter nitrofigilis DSM 7299 9170997 YP_003655012.1 CDS Arnit_0841 NC_014166.1 836564 837001 D COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: gur:Gura_1130 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A5GAR3 Transcriptional regulator, MarR family; PFAM: MarR family; MarR family transcriptional regulator 836564..837001 Arcobacter nitrofigilis DSM 7299 9170998 YP_003655013.1 CDS Arnit_0842 NC_014166.1 837002 837715 D COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198:IPR002347:IPR016040; KEGG: tdn:Suden_1856 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Q30PF1 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 837002..837715 Arcobacter nitrofigilis DSM 7299 9170999 YP_003655014.1 CDS Arnit_0843 NC_014166.1 837789 838103 R InterPro IPR005953:IPR002379:IPR000454:IPR020537; KEGG: abu:Abu_1748 F0F1 ATP synthase subunit C; PFAM: H+transporting two-sector ATPase C subunit; SPTR: A8EVM2 ATP synthase subunit c; TIGRFAM: ATP synthase F0, C subunit; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase F0 subunit C complement(837789..838103) Arcobacter nitrofigilis DSM 7299 9171000 YP_003655015.1 CDS Arnit_0844 NC_014166.1 838304 840466 R COGs: COG2200 FOG: EAL domain; InterProIPR000014:IPR000700:IPR001633:IPR000160:IPR 013767:IPR001610; KEGG: wsu:WS0775 nitrogen fixation positive protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Q7M9P6 NITROGEN FIXATION POSITIVE PROTEIN; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS/PAC sensor-containg diguanylate cyclase/phosphodiesterase complement(838304..840466) Arcobacter nitrofigilis DSM 7299 9171001 YP_003655016.1 CDS Arnit_0845 NC_014166.1 840508 842019 D KEGG: hac:Hac_0445 putative outer membrane protein; SPTR: Q17YK0 Putative outer membrane protein; PFAM: Domain of Unknown Function (DUF748); putative outer membrane protein 840508..842019 Arcobacter nitrofigilis DSM 7299 9171002 YP_003655017.1 CDS Arnit_0846 NC_014166.1 842021 842686 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: abu:Abu_1725 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EVJ9 DNA-binding response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(842021..842686) Arcobacter nitrofigilis DSM 7299 9171003 YP_003655018.1 CDS Arnit_0847 NC_014166.1 842778 844625 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_1831 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8EVU8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 842778..844625 Arcobacter nitrofigilis DSM 7299 9171004 YP_003655019.1 CDS Arnit_0848 NC_014166.1 844716 845939 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR003661:IPR003594:IPR 004358:IPR009082; KEGG: abu:Abu_1730 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EVK4 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; PAS/PAC sensor signal transduction histidine kinase 844716..845939 Arcobacter nitrofigilis DSM 7299 9171005 YP_003655020.1 CDS Arnit_0849 NC_014166.1 845936 846220 R KEGG: cac:CA_P0158 hypothetical protein; SPTR: Q97TE6 Putative uncharacterized protein; hypothetical protein complement(845936..846220) Arcobacter nitrofigilis DSM 7299 9171006 YP_003655021.1 CDS Arnit_0850 NC_014166.1 846311 847021 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR001509:IPR002347:IPR002198:IPR016040; KEGG: tcx:Tcr_0945 short-chain dehydrogenase/reductase SDR; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q31H33 Short-chain alcohol dehydrogenase homolog; PFAM: short chain dehydrogenase; NAD-dependent epimerase/dehydratase 846311..847021 Arcobacter nitrofigilis DSM 7299 9171007 YP_003655022.1 CDS Arnit_0851 NC_014166.1 847078 847974 R InterPro IPR000620; KEGG: wsu:WS0127 putative integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1ZYV7 Integral membrane protein DUF6; PFAM: EamA-like transporter family; hypothetical protein complement(847078..847974) Arcobacter nitrofigilis DSM 7299 9171008 YP_003655023.1 CDS Arnit_0852 NC_014166.1 848027 848821 R COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterProIPR018060:IPR003313:IPR000005:IPR012287:IPR 009057:IPR018062; KEGG: nam:NAMH_1769 transcriptional regulator, AraC/XylS family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; SPTR: B9L6Z7 Transcriptional regulator, AraC/XylS family; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(848027..848821) Arcobacter nitrofigilis DSM 7299 9171009 YP_003655024.1 CDS Arnit_0853 NC_014166.1 848868 849440 R COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR017936:IPR003782:IPR012335:IPR012336; KEGG: ccv:CCV52592_1941 SCO1/SenC family protein; PFAM: electron transport protein SCO1/SenC; SPTR: A7GZN3 SCO1/SenC family protein; PFAM: SCO1/SenC; electron transport protein SCO1/SenC complement(848868..849440) Arcobacter nitrofigilis DSM 7299 9171010 YP_003655025.1 CDS Arnit_0854 NC_014166.1 849440 849931 R KEGG: dar:Daro_1576 hypothetical protein; SPTR: C1ZXW1 Putative uncharacterized protein; hypothetical protein complement(849440..849931) Arcobacter nitrofigilis DSM 7299 9171011 YP_003655026.1 CDS Arnit_0855 NC_014166.1 849935 850429 R COGs: COG2847 conserved hypothetical protein; InterPro IPR007410; KEGG: vsa:VSAL_II0797 hypothetical protein; PFAM: protein of unknown function DUF461; SPTR: Q2BJZ9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF461); hypothetical protein complement(849935..850429) Arcobacter nitrofigilis DSM 7299 9171012 YP_003655027.1 CDS Arnit_0856 NC_014166.1 850472 851761 R COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: abu:Abu_1374 sodium:hydrogen antiporter; PFAM: Na+/H+ antiporter NhaA; SPTR: B6BJD0 Na+/H+ antiporter NhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA complement(850472..851761) Arcobacter nitrofigilis DSM 7299 9171013 YP_003655028.1 CDS Arnit_0857 NC_014166.1 851774 852139 R COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: abu:Abu_1740 FUR family transcriptional regulator; PFAM: ferric-uptake regulator; SPTR: A8EVL4 Transcriptional regulator, Fur family; PFAM: Ferric uptake regulator family; Fur family ferric uptake regulator complement(851774..852139) Arcobacter nitrofigilis DSM 7299 9171014 YP_003655029.1 CDS Arnit_0858 NC_014166.1 852243 853106 D COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: abu:Abu_1739 putative cation ABC transporter, periplasmic-binding protein; PFAM: periplasmic solute binding protein; SPTR: A8EVL3 Putative cation ABC transporter, periplasmic-binding protein; PFAM: Periplasmic solute binding protein family; periplasmic solute binding protein 852243..853106 Arcobacter nitrofigilis DSM 7299 9171015 YP_003655030.1 CDS Arnit_0859 NC_014166.1 853103 854527 D COGs: COG2215 ABC-type uncharacterized transport system permease component; InterPro IPR011541; KEGG: abu:Abu_1738 putative nickel transporter; PFAM: high-affinity nickel-transporter; SPTR: A8EVL2 Putative nickel transporter; PFAM: High-affinity nickel-transport protein; high-affinity nickel-transporter 853103..854527 Arcobacter nitrofigilis DSM 7299 9171016 YP_003655031.1 CDS Arnit_0860 NC_014166.1 854547 856472 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004090; KEGG: abu:Abu_1831 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EVU8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(854547..856472) Arcobacter nitrofigilis DSM 7299 9171017 YP_003655032.1 CDS Arnit_0861 NC_014166.1 856577 858724 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660; KEGG: abu:Abu_0789 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ESY0 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(856577..858724) Arcobacter nitrofigilis DSM 7299 9171018 YP_003655033.1 CDS Arnit_0862 NC_014166.1 858883 860340 D COGs: COG0397 conserved hypothetical protein; InterPro IPR003846; KEGG: sun:SUN_1621 hypothetical protein; PFAM: protein of unknown function UPF0061; SPTR: A6QAR2 Putative uncharacterized protein; PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein 858883..860340 Arcobacter nitrofigilis DSM 7299 9171019 YP_003655034.1 CDS Arnit_0863 NC_014166.1 860360 860908 R InterPro IPR007372; KEGG: hps:HPSH_01580 hypothetical protein; PFAM: YceI family protein; SPTR: B2USD6 Putative uncharacterized protein; PFAM: YceI-like domain; hypothetical protein complement(860360..860908) Arcobacter nitrofigilis DSM 7299 9171020 YP_003655035.1 CDS Arnit_0864 NC_014166.1 861026 861586 R KEGG: ttu:TERTU_1535 hypothetical protein; SPTR: C5BTA8 Putative uncharacterized protein; hypothetical protein complement(861026..861586) Arcobacter nitrofigilis DSM 7299 9171021 YP_003655036.1 CDS Arnit_0865 NC_014166.1 861639 863882 R COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000700:IPR000160:IPR013767:IPR 001610; KEGG: tdn:Suden_1041 diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C1SKH4 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS/PAC sensor-containg diguanylate cyclase complement(861639..863882) Arcobacter nitrofigilis DSM 7299 9171022 YP_003655037.1 CDS Arnit_0866 NC_014166.1 863950 864345 R InterPro IPR011637; KEGG: maq:Maqu_0059 DoxX family protein; PFAM: DoxX family protein; SPTR: B4WYL3 DoxX subfamily, putative; PFAM: DoxX; DoxX family protein complement(863950..864345) Arcobacter nitrofigilis DSM 7299 9171023 YP_003655038.1 CDS Arnit_0867 NC_014166.1 864425 864700 R KEGG: dze:Dd1591_1059 DEAD/DEAH box helicase domain protein; SPTR: C8QTF8 DEAD/DEAH box helicase domain protein; hypothetical protein complement(864425..864700) Arcobacter nitrofigilis DSM 7299 9171024 YP_003655039.1 CDS Arnit_0868 NC_014166.1 864712 864996 R KEGG: fjo:Fjoh_2384 putative inner membrane protein translocase component YidC; SPTR: B9CRQ2 Conserved domain protein; hypothetical protein complement(864712..864996) Arcobacter nitrofigilis DSM 7299 9171025 YP_003655040.1 CDS Arnit_0869 NC_014166.1 865043 865384 R COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744:IPR002052; KEGG: abu:Abu_0606 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: A8ESE7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF59; hypothetical protein complement(865043..865384) Arcobacter nitrofigilis DSM 7299 9171026 YP_003655041.1 CDS Arnit_0870 NC_014166.1 865385 865792 R COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: abu:Abu_0607 putative SUF regulatory protein; PFAM: Fe-S metabolism associated SufE; SPTR: A8ESE8 Putative suf regulatory protein; PFAM: Fe-S metabolism associated domain; Fe-S metabolism associated SufE complement(865385..865792) Arcobacter nitrofigilis DSM 7299 9171027 YP_003655042.1 CDS Arnit_0871 NC_014166.1 865794 866969 R COGs: COG0520 Selenocysteine lyase; InterProIPR000192:IPR015421:IPR015424:IPR000276:IPR 020578; KEGG: abu:Abu_0608 selenocysteine lyase/cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: A8ESE9 Selenocysteine lyase/Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; cysteine desulfurase complement(865794..866969) Arcobacter nitrofigilis DSM 7299 9171028 YP_003655043.1 CDS Arnit_0872 NC_014166.1 866969 868006 R COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: abu:Abu_0609 Fe-S assembly protein; PFAM: SufBD protein; SPTR: A8ESF0 Fe-S assembly protein; PFAM: Uncharacterized protein family (UPF0051); SufBD protein complement(866969..868006) Arcobacter nitrofigilis DSM 7299 9171029 YP_003655044.1 CDS Arnit_0873 NC_014166.1 868008 868748 R COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439:IPR010230:IPR003593:IPR017871; KEGG: abu:Abu_0610 Fe-S assembly ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ESF1 Fe-S assembly ABC transporter, ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; FeS assembly ATPase SufC complement(868008..868748) Arcobacter nitrofigilis DSM 7299 9171030 YP_003655045.1 CDS Arnit_0874 NC_014166.1 868787 870220 R COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231:IPR000825; KEGG: abu:Abu_0611 Fe-S assembly ABC transporter, permease protein; PFAM: SufBD protein; SPTR: A8ESF2 Fe-S assembly ABC transporter, permease protein; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; FeS assembly protein SufB complement(868787..870220) Arcobacter nitrofigilis DSM 7299 9171031 YP_003655046.1 CDS Arnit_0875 NC_014166.1 870488 871684 D COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterProIPR017773:IPR000192:IPR015421:IPR015424:IPR 000834:IPR016454; KEGG: abu:Abu_0612 cysteine desulfurase/aminotransferase (IscS/NifS); PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: A8ESF3 Cysteine desulfurase/aminotransferase (IscS/NifS); TIGRFAM: cysteine desulfurase, NifS family; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase, NifS family, epsilon proteobacteria type; cysteine desulfurase NifS; cysteine desulfurase, NifS family 870488..871684 Arcobacter nitrofigilis DSM 7299 9171032 YP_003655047.1 CDS Arnit_0876 NC_014166.1 871706 872686 D COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871:IPR007419:IPR001075:IPR016217; KEGG: abu:Abu_0613 NifU-like protein; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; SPTR: A8ESF4 NifU-like protein; PFAM: NifU-like N terminal domain; BFD-like [2Fe-2S] binding domain; NifU-like domain; TIGRFAM: Fe-S cluster assembly protein NifU; nitrogen-fixing NifU domain-containing protein 871706..872686 Arcobacter nitrofigilis DSM 7299 9171033 YP_003655048.1 CDS Arnit_0877 NC_014166.1 872736 874229 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016162:IPR016161; KEGG: rle:RL3613 putative aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Q1YQB8 Aldehyde dehydrogenase family protein; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(872736..874229) Arcobacter nitrofigilis DSM 7299 9171034 YP_003655049.1 CDS Arnit_0878 NC_014166.1 874380 875900 R COGs: COG0554 Glycerol kinase; InterPro IPR005999:IPR018484:IPR018485:IPR018483; KEGG: rde:RD1_2883 glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: B6B1Z4 Glycerol kinase; TIGRFAM: glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; glycerol kinase complement(874380..875900) Arcobacter nitrofigilis DSM 7299 9171035 YP_003655050.1 CDS Arnit_0879 NC_014166.1 875963 877660 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR014597; KEGG: rhi:NGR_c31000 putative periplasmic binding component of ABC transporter; SPTR: A0YAC2 Extracellular solute-binding protein, family 1; putative periplasmic binding component of ABC transporter complement(875963..877660) Arcobacter nitrofigilis DSM 7299 9171036 YP_003655051.1 CDS Arnit_0880 NC_014166.1 877726 878004 R COGs: COG5477 small integral membrane protein; InterPro IPR018678; KEGG: rsk:RSKD131_0979 hypothetical protein; PFAM: Protein of unknown function DUF2160, transmembrane; SPTR: A0YAC3 Putative uncharacterized protein; PFAM: Predicted small integral membrane protein (DUF2160); hypothetical protein complement(877726..878004) Arcobacter nitrofigilis DSM 7299 9171037 YP_003655052.1 CDS Arnit_0881 NC_014166.1 878016 878843 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pde:Pden_4389 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A0YAC4 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(878016..878843) Arcobacter nitrofigilis DSM 7299 9171038 YP_003655053.1 CDS Arnit_0882 NC_014166.1 878847 879716 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rsk:RSKD131_0981 binding-protein-dependent transport systems inner membrane component precursor; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q3J313 ABC sugar (Glycerol) transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(878847..879716) Arcobacter nitrofigilis DSM 7299 9171039 YP_003655054.1 CDS Arnit_0883 NC_014166.1 879713 880792 R COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR008995:IPR003593; KEGG: jan:Jann_4103 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A0YAC6 ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(879713..880792) Arcobacter nitrofigilis DSM 7299 9171040 YP_003655055.1 CDS Arnit_0884 NC_014166.1 880804 881892 R COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR013611:IPR008995; KEGG: jan:Jann_4104 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SPTR: B7RIL5 ABC sugar (Glycerol) transporter, ATPase subunit; PFAM: ABC transporter; ABC transporter-like protein complement(880804..881892) Arcobacter nitrofigilis DSM 7299 9171041 YP_003655056.1 CDS Arnit_0885 NC_014166.1 882292 883851 D COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076:IPR000447:IPR000630; KEGG: bid:Bind_0378 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: B2IE07 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase 882292..883851 Arcobacter nitrofigilis DSM 7299 9171042 YP_003655057.1 CDS Arnit_0886 NC_014166.1 883959 884690 D COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: lmo:lmo1974 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Q8Y5T1 Lmo1974 protein; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; GntR family transcriptional regulator 883959..884690 Arcobacter nitrofigilis DSM 7299 9171043 YP_003655058.1 CDS Arnit_0887 NC_014166.1 884708 885433 D COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: lmo:lmo1974 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Q8Y5T1 Lmo1974 protein; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; GntR family transcriptional regulator 884708..885433 Arcobacter nitrofigilis DSM 7299 9171044 YP_003655059.1 CDS Arnit_0888 NC_014166.1 885513 886895 D COGs: COG0165 Argininosuccinate lyase; InterPro IPR009049:IPR000362:IPR003031:IPR008948; KEGG: abu:Abu_0616 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: A8ESF7 Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 885513..886895 Arcobacter nitrofigilis DSM 7299 9171045 YP_003655060.1 CDS Arnit_0889 NC_014166.1 886918 887820 R COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR001789:IPR002545:IPR011006; KEGG: abu:Abu_0617 chemotaxis signal transduction protein CheV; PFAM: response regulator receiver; CheW domain protein; SMART: response regulator receiver; CheW domain protein; SPTR: A8ESF8 Chemotaxis signal transduction protein CheV; PFAM: CheW-like domain; Response regulator receiver domain; response regulator receiver modulated CheW protein complement(886918..887820) Arcobacter nitrofigilis DSM 7299 9171046 YP_003655061.1 CDS Arnit_0890 NC_014166.1 887885 888529 R COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1; InterPro IPR000594:IPR016040:IPR009036; KEGG: abu:Abu_0618 MoeB/ThiF family protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: A8ESF9 MoeB/ThiF family protein; PFAM: ThiF family; UBA/THIF-type NAD/FAD binding protein complement(887885..888529) Arcobacter nitrofigilis DSM 7299 9171047 YP_003655062.1 CDS Arnit_0891 NC_014166.1 888621 889106 D COGs: COG0782 Transcription elongation factor; InterPro IPR006359:IPR001437; KEGG: abu:Abu_0619 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; SPTR: A8ESG0 Transcription elongation factor greA; TIGRFAM: transcription elongation factor GreA; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; GreA/GreB family elongation factor 888621..889106 Arcobacter nitrofigilis DSM 7299 9171048 YP_003655063.1 CDS Arnit_0892 NC_014166.1 889137 889838 D COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: abu:Abu_0620 hypothetical protein; PFAM: metallophosphoesterase; SPTR: A8ESG1 Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 889137..889838 Arcobacter nitrofigilis DSM 7299 9171049 YP_003655064.1 CDS Arnit_0893 NC_014166.1 890028 890393 D KEGG: cac:CAC0446 MutT/NUDIX family hydrolase; SPTR: Q97LV8 Uncharacterized Nudix hydrolase CA_C0446; hypothetical protein 890028..890393 Arcobacter nitrofigilis DSM 7299 9171050 YP_003655065.1 CDS Arnit_0894 NC_014166.1 890390 892363 D COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterProIPR001943:IPR014021:IPR001650:IPR004807:IPR 006935:IPR009055:IPR014001; KEGG: abu:Abu_0621 excinuclease ABC subunit B; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ESG2 UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit B 890390..892363 Arcobacter nitrofigilis DSM 7299 9171051 YP_003655066.1 CDS Arnit_0895 NC_014166.1 892519 893433 R InterProIPR000223:IPR019759:IPR011056:IPR015927:IPR 019758; KEGG: abu:Abu_0636 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: A8ESH7 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I complement(892519..893433) Arcobacter nitrofigilis DSM 7299 9171052 YP_003655067.1 CDS Arnit_0896 NC_014166.1 893494 893817 R InterPro IPR007712; KEGG: sun:SUN_1367 plasmid stabilization system protein protein; PFAM: plasmid stabilization system; SPTR: Q8GNE5 Putative uncharacterized protein; PFAM: Plasmid stabilisation system protein; plasmid stabilization system complement(893494..893817) Arcobacter nitrofigilis DSM 7299 9171053 YP_003655068.1 CDS Arnit_0897 NC_014166.1 893818 894090 R InterPro IPR006442:IPR003756; KEGG: sun:SUN_1366 prevent-host-death protein; PFAM: protein of unknown function DUF172; SPTR: A6QA10 Prevent-host-death protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(893818..894090) Arcobacter nitrofigilis DSM 7299 9171054 YP_003655069.1 CDS Arnit_0898 NC_014166.1 894205 894849 D COGs: COG0177 EndoIII-related endonuclease; InterPro IPR005759:IPR003265:IPR003651:IPR011257; KEGG: abu:Abu_0623 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; SPTR: A8ESG4 Endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: endonuclease III; endonuclease III 894205..894849 Arcobacter nitrofigilis DSM 7299 9171055 YP_003655070.1 CDS Arnit_0899 NC_014166.1 894860 895261 R KEGG: abu:Abu_0624 hypothetical protein; SPTR: A8ESG5 Putative uncharacterized protein; hypothetical protein complement(894860..895261) Arcobacter nitrofigilis DSM 7299 9171056 YP_003655071.1 CDS Arnit_0900 NC_014166.1 895285 895530 R KEGG: Ras GTPase-activating protein; SPTR: C4LW12 Ras GTPase-activating protein, putative; Ras GTPase-activating protein complement(895285..895530) Arcobacter nitrofigilis DSM 7299 9171057 YP_003655072.1 CDS Arnit_0901 NC_014166.1 895804 897786 D COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: abu:Abu_0625 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8ESG6 TonB-dependent receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 895804..897786 Arcobacter nitrofigilis DSM 7299 9171058 YP_003655073.1 CDS Arnit_0902 NC_014166.1 897807 899780 D COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR009081:IPR012910:IPR000531; KEGG: abu:Abu_0625 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8ESG6 TonB-dependent receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor; TonB-dependent receptor 897807..899780 Arcobacter nitrofigilis DSM 7299 9171059 YP_003655074.1 CDS Arnit_0903 NC_014166.1 899807 901036 R COGs: COG1896 hydrolase of HD superfamily; KEGG: abu:Abu_0634 hypothetical protein; SPTR: A8ESH5 Putative uncharacterized protein; hypothetical protein complement(899807..901036) Arcobacter nitrofigilis DSM 7299 9171060 YP_003655075.1 CDS Arnit_0904 NC_014166.1 901029 901145 R hypothetical protein complement(901029..901145) Arcobacter nitrofigilis DSM 7299 9171061 YP_003655076.1 CDS Arnit_0905 NC_014166.1 901285 902265 D COGs: COG4866 conserved hypothetical protein; InterPro IPR016732; KEGG: wsu:WS0069 hypothetical protein; PFAM: Uncharacterised conserved protein UCP018688; SPTR: Q7MSV6 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2156); hypothetical protein 901285..902265 Arcobacter nitrofigilis DSM 7299 9171062 YP_003655077.1 CDS Arnit_0906 NC_014166.1 902262 902684 D InterPro IPR000182:IPR016181; KEGG: tdn:Suden_1201 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Q30RA2 SSU ribosomal protein S18P alanine acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 902262..902684 Arcobacter nitrofigilis DSM 7299 9171063 YP_003655078.1 CDS Arnit_0907 NC_014166.1 902695 903144 R COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: abu:Abu_0635 ribose-5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: A8ESH6 Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; RpiB/LacA/LacB family sugar-phosphate isomerase complement(902695..903144) Arcobacter nitrofigilis DSM 7299 9171064 YP_003655079.1 CDS Arnit_0908 NC_014166.1 903146 903931 R COGs: COG0681 Signal peptidase I; InterProIPR019759:IPR011056:IPR000223:IPR019758:IPR 015927; KEGG: abu:Abu_0636 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: A8ESH7 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I complement(903146..903931) Arcobacter nitrofigilis DSM 7299 9171065 YP_003655080.1 CDS Arnit_0909 NC_014166.1 903932 904792 R COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterProIPR020630:IPR020631:IPR016040:IPR000672:IPR 016160; KEGG: abu:Abu_0637 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: A8ESH8 Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase complement(903932..904792) Arcobacter nitrofigilis DSM 7299 9171066 YP_003655081.1 CDS Arnit_0910 NC_014166.1 904863 905225 D InterPro IPR009056; KEGG: abu:Abu_0862 hypothetical protein; SPTR: A8ET48 Putative uncharacterized protein; hypothetical protein 904863..905225 Arcobacter nitrofigilis DSM 7299 9171067 YP_003655082.1 CDS Arnit_0911 NC_014166.1 905298 905834 D COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); InterProIPR020055:IPR020056:IPR020057:IPR011035:IPR 001021; KEGG: abu:Abu_0638 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25-like; SPTR: A8ESH9 50S ribosomal protein L25; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 905298..905834 Arcobacter nitrofigilis DSM 7299 9171068 YP_003655083.1 CDS Arnit_0912 NC_014166.1 905841 906392 D COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328:IPR018171; KEGG: abu:Abu_0639 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: A8ESI0 Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 905841..906392 Arcobacter nitrofigilis DSM 7299 9171069 YP_003655084.1 CDS Arnit_0913 NC_014166.1 906393 907463 D COGs: COG0795 permease; InterPro IPR005495:IPR000102; KEGG: abu:Abu_0640 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: A8ESI1 Conserved hypothetical membrane protein; PFAM: Predicted permease YjgP/YjgQ family; YjgP/YjgQ family permease 906393..907463 Arcobacter nitrofigilis DSM 7299 9171070 YP_003655085.1 CDS Arnit_0914 NC_014166.1 907463 907906 D InterPro IPR000086:IPR020084:IPR015797; KEGG: abu:Abu_0641 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: A8ESI2 Putative uncharacterized protein; PFAM: NUDIX domain; NUDIX hydrolase 907463..907906 Arcobacter nitrofigilis DSM 7299 9171071 YP_003655086.1 CDS Arnit_0915 NC_014166.1 907869 909134 R COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: abu:Abu_0642 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; PRIAM: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SPTR: A8ESI3 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(907869..909134) Arcobacter nitrofigilis DSM 7299 9171072 YP_003655087.1 CDS Arnit_0916 NC_014166.1 909226 910302 R COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136:IPR013785; KEGG: abu:Abu_0643 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase NPD; SPTR: A8ESI4 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase; 2-nitropropane dioxygenase complement(909226..910302) Arcobacter nitrofigilis DSM 7299 9171073 YP_003655088.1 CDS Arnit_0917 NC_014166.1 910312 911520 R COGs: COG0162 Tyrosyl-tRNA synthetase; InterProIPR002305:IPR002942:IPR014729:IPR002307:IPR 001412; KEGG: abu:Abu_0644 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; PRIAM: Tyrosine--tRNA ligase; SMART: RNA-binding S4 domain protein; SPTR: A8ESI5 Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(910312..911520) Arcobacter nitrofigilis DSM 7299 9171074 YP_003655089.1 CDS Arnit_0918 NC_014166.1 911573 913714 R COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR006674:IPR007685:IPR004095:IPR003607:IPR 012676:IPR004811; KEGG: abu:Abu_0645 bifunctional ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: A8ESI6 Bifunctional ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; (p)ppGpp synthetase I SpoT/RelA complement(911573..913714) Arcobacter nitrofigilis DSM 7299 9171075 YP_003655090.1 CDS Arnit_0919 NC_014166.1 913720 913932 R InterPro IPR006110:IPR003716; KEGG: abu:Abu_0646 DNA-directed RNA polymerase, omega chain; PFAM: RNA polymerase Rpb6; SPTR: A8ESI7 DNA-directed RNA polymerase, omega chain; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega complement(913720..913932) Arcobacter nitrofigilis DSM 7299 9171076 YP_003655091.1 CDS Arnit_0920 NC_014166.1 913946 914653 R COGs: COG0528 Uridylate kinase; InterPro IPR001048:IPR011817:IPR015963; KEGG: abu:Abu_0647 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: UMP kinase; SPTR: A8ESI8 Uridylate kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase complement(913946..914653) Arcobacter nitrofigilis DSM 7299 9171077 YP_003655092.1 CDS Arnit_0921 NC_014166.1 914720 915787 R KEGG: abu:Abu_0648 hypothetical protein; SPTR: A8ESI9 Putative uncharacterized protein; hypothetical protein complement(914720..915787) Arcobacter nitrofigilis DSM 7299 9171078 YP_003655093.1 CDS Arnit_0922 NC_014166.1 915792 916736 R COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: abu:Abu_0649 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: A8ESJ0 Pyridoxal phosphate biosynthetic protein A; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase complement(915792..916736) Arcobacter nitrofigilis DSM 7299 9171079 YP_003655094.1 CDS Arnit_0923 NC_014166.1 916742 917524 R COGs: COG0854 Pyridoxal phosphate biosynthesis protein; InterPro IPR004569:IPR013785; KEGG: abu:Abu_0650 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: A8ESJ1 Pyridoxine 5'-phosphate synthase; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxal phosphate biosynthetic protein PdxJ complement(916742..917524) Arcobacter nitrofigilis DSM 7299 9171080 YP_003655095.1 CDS Arnit_0924 NC_014166.1 917603 919012 R COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890:IPR005801:IPR019999; KEGG: abu:Abu_0651 anthranilate synthase, component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: A8ESJ2 Anthranilate synthase, component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; anthranilate synthase complement(917603..919012) Arcobacter nitrofigilis DSM 7299 9171081 YP_003655096.1 CDS Arnit_0925 NC_014166.1 919028 920005 R InterPro IPR007730; KEGG: abu:Abu_0652 hypothetical protein; PFAM: Sporulation domain protein; SPTR: A8ESJ3 Putative uncharacterized protein; PFAM: Sporulation related domain; sporulation domain-containing protein complement(919028..920005) Arcobacter nitrofigilis DSM 7299 9171082 YP_003655097.1 CDS Arnit_0926 NC_014166.1 920028 921290 R COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085:IPR015421:IPR019798:IPR015424; KEGG: abu:Abu_1460 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: A8EUU1 Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(920028..921290) Arcobacter nitrofigilis DSM 7299 9171083 YP_003655098.1 CDS Arnit_0927 NC_014166.1 921314 922828 R COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR004365:IPR004364:IPR012340:IPR018149:IPR 016027:IPR002313:IPR006195; KEGG: abu:Abu_0654 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: A8ESJ5 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase complement(921314..922828) Arcobacter nitrofigilis DSM 7299 9171084 YP_003655099.1 CDS Arnit_0928 NC_014166.1 922841 923575 R COGs: COG1286 membrane protein required for colicin V production; InterPro IPR003825; KEGG: abu:Abu_0655 colicin V production protein; PFAM: Colicin V production protein; SPTR: A8ESJ6 Colicin V production protein; PFAM: Colicin V production protein; colicin V production protein complement(922841..923575) Arcobacter nitrofigilis DSM 7299 9171085 YP_003655100.1 CDS Arnit_0929 NC_014166.1 923639 925825 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR018247:IPR005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B6BHU8 Diguanylate cyclase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(923639..925825) Arcobacter nitrofigilis DSM 7299 9171086 YP_003655101.1 CDS Arnit_0930 NC_014166.1 925908 926975 D COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR004588:IPR016425:IPR011005; KEGG: abu:Abu_0656 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein; PRIAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; SPTR: A8ESJ7 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 925908..926975 Arcobacter nitrofigilis DSM 7299 9171087 YP_003655102.1 CDS Arnit_0931 NC_014166.1 926985 928118 R COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR002938:IPR003042:IPR011777; KEGG: sun:SUN_1446 geranylgeranyl hydrogenase; PFAM: monooxygenase FAD-binding; SPTR: A6QA88 Geranylgeranyl hydrogenase; TIGRFAM: geranylgeranyl reductase; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase; geranylgeranyl reductase family; geranylgeranyl reductase complement(926985..928118) Arcobacter nitrofigilis DSM 7299 9171088 YP_003655103.1 CDS Arnit_0932 NC_014166.1 928198 929637 D COGs: COG0305 Replicative DNA helicase; InterPro IPR007693:IPR007694:IPR016136:IPR007692; KEGG: abu:Abu_0658 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SPTR: A8ESJ9 Replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase 928198..929637 Arcobacter nitrofigilis DSM 7299 9171089 YP_003655104.1 CDS Arnit_0933 NC_014166.1 929647 930396 D COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760:IPR020583:IPR006240; KEGG: tdn:Suden_0646 3(2),5 -bisphosphate nucleotidase; PFAM: inositol monophosphatase; SPTR: Q4HEK4 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; 3'(2'),5'-bisphosphate nucleotidase 929647..930396 Arcobacter nitrofigilis DSM 7299 9171090 YP_003655105.1 CDS Arnit_0934 NC_014166.1 930424 931146 D KEGG: ATPase; SPTR: B6BIM1 Putative uncharacterized protein; hypothetical protein 930424..931146 Arcobacter nitrofigilis DSM 7299 9171091 YP_003655106.1 CDS Arnit_0935 NC_014166.1 931213 931608 D InterPro IPR012902:IPR000983; KEGG: abu:Abu_0697 hypothetical protein; SPTR: A8ESN8 Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 931213..931608 Arcobacter nitrofigilis DSM 7299 9171092 YP_003655107.1 CDS Arnit_0936 NC_014166.1 931619 932149 D COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR013954:IPR004446:IPR006543:IPR006549; KEGG: tdn:Suden_0574 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; PFAM: Polynucleotide kinase 3 phosphatase central region; PRIAM: Histidinol-phosphatase; SPTR: Q30T28 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase; D,D-heptose 1,7-bisphosphate phosphatase 931619..932149 Arcobacter nitrofigilis DSM 7299 9171093 YP_003655108.1 CDS Arnit_0937 NC_014166.1 932133 932930 R COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310:IPR012340:IPR016059:IPR016027; KEGG: abu:Abu_0698 DNA ligase; PFAM: ATP dependent DNA ligase; PRIAM: DNA ligase (ATP); SPTR: A8ESN9 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase domain; DNA ligase (ATP) complement(932133..932930) Arcobacter nitrofigilis DSM 7299 9171094 YP_003655109.1 CDS Arnit_0938 NC_014166.1 933042 934052 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040:IPR011912; KEGG: abu:Abu_1796 ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8EVR3 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 933042..934052 Arcobacter nitrofigilis DSM 7299 9171095 YP_003655110.1 CDS Arnit_0939 NC_014166.1 934052 935482 D COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterProIPR011611:IPR004820:IPR014729:IPR011913:IPR 011914:IPR004821; KEGG: abu:Abu_1797 ADP-heptose synthase; PFAM: PfkB domain protein; cytidylyltransferase; SPTR: A8EVR4 Bifunctional protein hldE; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain; rfaE bifunctional protein 934052..935482 Arcobacter nitrofigilis DSM 7299 9171096 YP_003655111.1 CDS Arnit_0940 NC_014166.1 935484 936056 D COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347:IPR004515; KEGG: abu:Abu_1798 phosphoheptose isomerase; PFAM: sugar isomerase (SIS); SPTR: A8EVR5 Phosphoheptose isomerase; TIGRFAM: phosphoheptose isomerase; PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; phosphoheptose isomerase 935484..936056 Arcobacter nitrofigilis DSM 7299 9171097 YP_003655112.1 CDS Arnit_0941 NC_014166.1 936057 936599 D COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836:IPR005764; KEGG: nis:NIS_0707 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Adenine phosphoribosyltransferase; SPTR: A6Q2W2 Adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 936057..936599 Arcobacter nitrofigilis DSM 7299 9171098 YP_003655113.1 CDS Arnit_0942 NC_014166.1 936599 937810 D COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR001926:IPR006653:IPR006654; KEGG: abu:Abu_0700 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8ESP1 Tryptophan synthase, beta chain; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 936599..937810 Arcobacter nitrofigilis DSM 7299 9171099 YP_003655114.1 CDS Arnit_0943 NC_014166.1 937819 938514 D COGs: COG0586 membrane-associated protein; KEGG: abu:Abu_0701 hypothetical protein; SPTR: A8ESP2 Conserved hypothetical membrane protein; PFAM: SNARE associated Golgi protein; hypothetical protein 937819..938514 Arcobacter nitrofigilis DSM 7299 9171100 YP_003655115.1 CDS Arnit_0944 NC_014166.1 938495 939913 D COGs: COG0260 Leucyl aminopeptidase; InterPro IPR008283:IPR000819; KEGG: abu:Abu_0702 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; PRIAM: Leucyl aminopeptidase; SPTR: A8ESP3 Aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; leucyl aminopeptidase 938495..939913 Arcobacter nitrofigilis DSM 7299 9171101 YP_003655116.1 CDS Arnit_0945 NC_014166.1 939946 940914 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013785; KEGG: abu:Abu_1489 HMGL family protein; PFAM: pyruvate carboxyltransferase; SPTR: A8EUX0 HMGL family protein; PFAM: HMGL-like; pyruvate carboxyltransferase 939946..940914 Arcobacter nitrofigilis DSM 7299 9171102 YP_003655117.1 CDS Arnit_0946 NC_014166.1 940946 941368 R KEGG: abu:Abu_1491 hypothetical protein; SPTR: A8EUX2 Putative uncharacterized protein; PFAM: DoxX; hypothetical protein complement(940946..941368) Arcobacter nitrofigilis DSM 7299 9171103 YP_003655118.1 CDS Arnit_0947 NC_014166.1 941421 942620 R COGs: COG0787 Alanine racemase; InterProIPR001608:IPR011079:IPR000821:IPR020622:IPR 009006; KEGG: aoe:Clos_2275 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: A8MJ26 Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase complement(941421..942620) Arcobacter nitrofigilis DSM 7299 9171104 YP_003655119.1 CDS Arnit_0948 NC_014166.1 942757 943995 R COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076:IPR000447; KEGG: hps:HPSH_04965 D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: B2UU91 D-Amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; D-amino-acid dehydrogenase complement(942757..943995) Arcobacter nitrofigilis DSM 7299 9171105 YP_003655120.1 CDS Arnit_0949 NC_014166.1 944014 944388 R COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175:IPR013813:IPR019897:IPR006056; KEGG: hpp:HPP12_0941 translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: B6JMG5 Translation initiation inhibitor; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP complement(944014..944388) Arcobacter nitrofigilis DSM 7299 9171106 YP_003655121.1 CDS Arnit_0950 NC_014166.1 944572 945219 D COGs: COG2964 conserved hypothetical protein; InterPro IPR013559; KEGG: ckr:CKR_0542 hypothetical protein; PFAM: YheO domain protein; SPTR: B9DZB8 Putative uncharacterized protein; PFAM: YheO-like PAS domain; YheO domain-containing protein 944572..945219 Arcobacter nitrofigilis DSM 7299 9171107 YP_003655122.1 CDS Arnit_0951 NC_014166.1 945342 946490 D COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dde:Dde_1548 TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: Q311Q1 TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; family 7 extracellular solute-binding protein 945342..946490 Arcobacter nitrofigilis DSM 7299 9171108 YP_003655123.1 CDS Arnit_0952 NC_014166.1 946491 947018 D COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: dde:Dde_1549 TRAP-type C4-dicarboxylate transport system small permease component-like; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Q311Q0 TRAP-type C4-dicarboxylate transport system small permease component-like; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ 946491..947018 Arcobacter nitrofigilis DSM 7299 9171109 YP_003655124.1 CDS Arnit_0953 NC_014166.1 947015 948298 D COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: dde:Dde_1550 TRAP dicarboxylate transporter-DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q311P9 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 947015..948298 Arcobacter nitrofigilis DSM 7299 9171110 YP_003655125.1 CDS Arnit_0954 NC_014166.1 948364 949134 D COGs: COG2173 D-alanyl-D-alanine dipeptidase; InterPro IPR000755:IPR009045; KEGG: dde:Dde_1551 D-alanyl-D-alanine dipeptidase; PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; SPTR: Q311P8 D-alanyl-D-alanine dipeptidase; PFAM: D-ala-D-ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 948364..949134 Arcobacter nitrofigilis DSM 7299 9171111 YP_003655126.1 CDS Arnit_0955 NC_014166.1 949137 949394 R Contains Selenocysteine; InterPro IPR011893; KEGG: amt:Amet_3680 putative selenoprotein; SPTR: C5SY02 Conserved hypothetical selenoprotein; TIGRFAM: conserved hypothetical protein; PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain; hypothetical protein complement(949137..949394) Arcobacter nitrofigilis DSM 7299 9171112 YP_003655127.1 CDS Arnit_0956 NC_014166.1 949485 950033 D InterPro IPR011576:IPR009002; KEGG: hch:HCH_03205 signal transduction histidine kinase, nitrogen specific; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: A4TXG4 Pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like protein 949485..950033 Arcobacter nitrofigilis DSM 7299 9171113 YP_003655128.1 CDS Arnit_0957 NC_014166.1 950651 951655 D InterPro IPR013838:IPR013026; KEGG: pgn:PGN_1340 hypothetical protein; SPTR: B2RKG4 Putative uncharacterized protein; PFAM: Sir2 family; hypothetical protein 950651..951655 Arcobacter nitrofigilis DSM 7299 9171114 YP_003655129.1 CDS Arnit_0958 NC_014166.1 951814 952833 D InterPro IPR001440:IPR019734:IPR011990:IPR013026; KEGG: shm:Shewmr7_0048 tetratricopeptide domain-containing protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: C9LJQ0 Putative tetratricopeptide repeat-containing domain protein; hypothetical protein 951814..952833 Arcobacter nitrofigilis DSM 7299 9171115 YP_003655130.1 CDS Arnit_0959 NC_014166.1 952893 953363 D COGs: COG2258 conserved hypothetical protein; InterPro IPR005302:IPR011037; KEGG: azc:AZC_2787 MOSC domain-containing protein; PFAM: MOSC domain containing protein; SPTR: B9ZEJ3 MOSC domain containing protein; PFAM: MOSC domain; MOSC domain-containing protein 952893..953363 Arcobacter nitrofigilis DSM 7299 9171116 YP_003655131.1 CDS Arnit_0960 NC_014166.1 953365 954342 R COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR015422:IPR015424; KEGG: tdn:Suden_0816 cysteine sulfinate desulfinase/cysteine desulfurase; SPTR: Q30SD6 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes-like protein; cysteine sulfinate desulfinase/cysteine desulfurase complement(953365..954342) Arcobacter nitrofigilis DSM 7299 9171117 YP_003655132.1 CDS Arnit_0961 NC_014166.1 954335 954739 R KEGG: nam:NAMH_1294 ModE repressor domain protein; SPTR: B6BLJ4 ModE repressor domain protein; ModE repressor domain-containing protein complement(954335..954739) Arcobacter nitrofigilis DSM 7299 9171118 YP_003655133.1 CDS Arnit_0962 NC_014166.1 954732 955562 R COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; InterPro IPR003786; KEGG: tdn:Suden_0817 formate dehydrogenase accessory protein; PFAM: formate dehydrogenase subunit FdhD; SPTR: Q30SD5 Formate dehydrogenase, subunit FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD complement(954732..955562) Arcobacter nitrofigilis DSM 7299 9171119 YP_003655134.1 CDS Arnit_0963 NC_014166.1 955567 956517 R InterPro IPR016174; KEGG: abu:Abu_1496 putative FdhC protein; SPTR: A8EUX7 Putative FdhC protein; PFAM: Prokaryotic cytochrome b561; putative FdhC protein complement(955567..956517) Arcobacter nitrofigilis DSM 7299 9171120 YP_003655135.1 CDS Arnit_0964 NC_014166.1 956527 957123 R COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR000813:IPR017900:IPR017896; KEGG: abu:Abu_1510 formate dehydrogenase, iron-sulfur subunit FdhB; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EUX8 Formate dehydrogenase, iron-sulfur subunit FdhB; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin complement(956527..957123) Arcobacter nitrofigilis DSM 7299 9171121 YP_003655136.1 CDS Arnit_0965 NC_014166.1 957134 959341 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR009010; KEGG: tdn:Suden_0820 formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: Q30SD2 Formate dehydrogenase alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; molybdopterin oxidoreductase complement(957134..959341) Arcobacter nitrofigilis DSM 7299 9171122 YP_003655137.1 CDS Arnit_0966 NC_014166.1 959390 959935 R COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006963:IPR006656:IPR006655:IPR006311:IPR 017909; KEGG: abu:Abu_1498 formate dehydrogenase, large subunit FdhA; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: A8EUX9 Formate dehydrogenase, large subunit FdhA; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; molybdopterin oxidoreductase Fe4S4 region complement(959390..959935) Arcobacter nitrofigilis DSM 7299 9171123 YP_003655138.1 CDS Arnit_0967 NC_014166.1 959950 960174 R InterPro IPR002173:IPR006311:IPR017909; KEGG: abu:Abu_1512 formate dehydrogenase subunit E, putative; SPTR: A8EUZ3 Formate dehydrogenase subunit E, putative; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; formate dehydrogenase subunit E complement(959950..960174) Arcobacter nitrofigilis DSM 7299 9171124 YP_003655139.1 CDS Arnit_0968 NC_014166.1 960254 960865 R KEGG: abu:Abu_1500 hypothetical protein; SPTR: A8EUY1 Putative uncharacterized protein; PFAM: Nitrate reductase delta subunit; hypothetical protein complement(960254..960865) Arcobacter nitrofigilis DSM 7299 9171125 YP_003655140.1 CDS Arnit_0969 NC_014166.1 960858 962531 R InterPro IPR001450:IPR017900:IPR017896; KEGG: tdn:Suden_0824 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B6BLI6 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin complement(960858..962531) Arcobacter nitrofigilis DSM 7299 9171126 YP_003655141.1 CDS Arnit_0970 NC_014166.1 962692 963591 R COGs: COG2864 Cytochrome b subunit of formate dehydrogenase; InterPro IPR016174:IPR006471; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit; SPTR: B6BLJ2 Formate dehydrogenase, gamma subunit; TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma complement(962692..963591) Arcobacter nitrofigilis DSM 7299 9171127 YP_003655142.1 CDS Arnit_0971 NC_014166.1 963605 964204 R COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR017900:IPR017896; KEGG: dps:DP2987 formate dehydrogenase, iron-sulfur chain; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q6AIW4 Probable formate dehydrogenase, iron-sulfur chain; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin complement(963605..964204) Arcobacter nitrofigilis DSM 7299 9171128 YP_003655143.1 CDS Arnit_0972 NC_014166.1 964208 966472 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR009010; KEGG: dps:DP2986 formate dehydrogenase, chain A; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: Q6AIW5 Probable formate dehydrogenase, chain A; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; molybdopterin oxidoreductase complement(964208..966472) Arcobacter nitrofigilis DSM 7299 9171129 YP_003655144.1 CDS Arnit_0973 NC_014166.1 966494 967054 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006311:IPR017909; KEGG: dps:DP2986 formate dehydrogenase, chain A; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; SPTR: Q6AIW5 Probable formate dehydrogenase, chain A; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; molybdopterin oxidoreductase complement(966494..967054) Arcobacter nitrofigilis DSM 7299 9171130 YP_003655145.1 CDS Arnit_0974 NC_014166.1 967068 967268 R InterPro IPR017909; KEGG: dps:DP2985 hypothetical protein; SPTR: C2A0J6 Putative uncharacterized protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hypothetical protein complement(967068..967268) Arcobacter nitrofigilis DSM 7299 9171131 YP_003655146.1 CDS Arnit_0975 NC_014166.1 967430 968116 R KEGG: dps:DP2984 hypothetical protein; SPTR: Q6AIW7 Putative uncharacterized protein; PFAM: Nitrate reductase delta subunit; hypothetical protein complement(967430..968116) Arcobacter nitrofigilis DSM 7299 9171132 YP_003655147.1 CDS Arnit_0976 NC_014166.1 968094 968261 R hypothetical protein complement(968094..968261) Arcobacter nitrofigilis DSM 7299 9171133 YP_003655148.1 CDS Arnit_0977 NC_014166.1 968424 969569 D COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: abu:Abu_1502 leucine/isoleucine/valine-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: A8EUY3 Leucine/isoleucine/valine-binding protein; PFAM: Receptor family ligand binding region; extracellular ligand-binding receptor 968424..969569 Arcobacter nitrofigilis DSM 7299 9171134 YP_003655149.1 CDS Arnit_0978 NC_014166.1 969569 971152 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR004358:IPR005467; KEGG: abu:Abu_1503 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EUY4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 969569..971152 Arcobacter nitrofigilis DSM 7299 9171135 YP_003655150.1 CDS Arnit_0979 NC_014166.1 971142 971804 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1504 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EUY5 Two-component response regulator; PFAM: Response regulator receiver domain; Firmicute plasmid replication protein (RepL); response regulator receiver protein 971142..971804 Arcobacter nitrofigilis DSM 7299 9171136 YP_003655151.1 CDS Arnit_0980 NC_014166.1 971853 972131 R InterPro IPR006121; KEGG: abu:Abu_1506 heavy-metal transporting ATPase; PFAM: Heavy metal transport/detoxification protein; SPTR: A8EUY7 Heavy-metal transporting ATPase; PFAM: Heavy-metal-associated domain; heavy metal transport/detoxification protein complement(971853..972131) Arcobacter nitrofigilis DSM 7299 9171137 YP_003655152.1 CDS Arnit_0981 NC_014166.1 972134 972460 R KEGG: abu:Abu_1507 heavy-metal transport protein; SPTR: A8EUY8 Heavy-metal transport protein; heavy-metal transport protein complement(972134..972460) Arcobacter nitrofigilis DSM 7299 9171138 YP_003655153.1 CDS Arnit_0982 NC_014166.1 972457 973548 R COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931:IPR006311; KEGG: abu:Abu_1508 transglutaminase family protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: A8EUY9 Transglutaminase family protein; PFAM: Transglutaminase-like superfamily; transglutaminase domain-containing protein complement(972457..973548) Arcobacter nitrofigilis DSM 7299 9171139 YP_003655154.1 CDS Arnit_0983 NC_014166.1 973787 974131 D KEGG: nam:NAMH_1292 hypothetical protein; SPTR: B9L5P7 Putative uncharacterized protein; TIGRFAM: selenium metabolism protein YedF; hypothetical protein 973787..974131 Arcobacter nitrofigilis DSM 7299 9171140 YP_003655155.1 CDS Arnit_0984 NC_014166.1 974167 974928 R COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR002731:IPR008275; KEGG: wsu:WS0738 hydroxy-dehydratase activator; PFAM: ATPase BadF/BadG/BcrA/BcrD type; PRIAM: Benzoyl-CoA reductase; SPTR: C2A0Q0 CoA-substrate-specific enzyme activase, putative; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; CoA-substrate-specific enzyme activase complement(974167..974928) Arcobacter nitrofigilis DSM 7299 9171141 YP_003655156.1 CDS Arnit_0985 NC_014166.1 974928 976250 R COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: wsu:WS0739 hypothetical protein; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: C2A0P9 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D complement(974928..976250) Arcobacter nitrofigilis DSM 7299 9171142 YP_003655157.1 CDS Arnit_0986 NC_014166.1 976652 977629 D COGs: COG0709 Selenophosphate synthase; InterPro IPR000728:IPR010918:IPR004536:IPR016188; KEGG: tdn:Suden_0830 selenophosphate synthase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; SPTR: B6BLH9 Selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; selenide, water dikinase 976652..977629 Arcobacter nitrofigilis DSM 7299 9171143 YP_003655158.1 CDS Arnit_0987 NC_014166.1 977787 979133 D COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR018319:IPR015424:IPR004534; KEGG: abu:Abu_1524 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase; PRIAM: L-seryl-tRNA(Sec) selenium transferase; SPTR: A8EV04 L-seryl-tRNA(Sec) selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase; L-seryl-tRNA selenium transferase 977787..979133 Arcobacter nitrofigilis DSM 7299 9171145 YP_003655159.1 CDS Arnit_0988 NC_014166.1 979133 980962 D COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR000795:IPR004161:IPR011991:IPR009000:IPR 005225:IPR004535; KEGG: abu:Abu_1525 selenocysteine-specific elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; SPTR: A8EV05 Selenocysteine-specific elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU; selenocysteine-specific translation elongation factor 979133..980962 Arcobacter nitrofigilis DSM 7299 9171146 YP_003655160.1 CDS Arnit_0989 NC_014166.1 980963 981580 D KEGG: lbf:LBF_2597 methyltransferase/methylase; SPTR: A3J7I4 N-terminal Zn-ribbon domain fused to SAM-dependent methyltransferase; methyltransferase/methylase 980963..981580 Arcobacter nitrofigilis DSM 7299 9171147 YP_003655161.1 CDS Arnit_0990 NC_014166.1 981671 982111 D KEGG: hypothetical protein; SPTR: C3GW83 YfiN1; hypothetical protein 981671..982111 Arcobacter nitrofigilis DSM 7299 9171148 YP_003655162.1 CDS Arnit_0991 NC_014166.1 982092 982778 D KEGG: conserved hypothetical protein; SPTR: A8GP11 Large extracellular alpha-helical protein; hypothetical protein 982092..982778 Arcobacter nitrofigilis DSM 7299 9171149 YP_003655163.1 CDS Arnit_0993 NC_014166.1 984116 985186 R COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104:IPR013762:IPR011010; KEGG: tdn:Suden_0938 phage integrase; PFAM: integrase family protein; SPTR: B6BNI8 Phage integrase; PFAM: Domain of unknown function (DUF3596); Phage integrase family; integrase family protein complement(984116..985186) Arcobacter nitrofigilis DSM 7299 9171151 YP_003655164.1 CDS Arnit_0994 NC_014166.1 985122 985448 R KEGG: oih:OB3324 hypothetical protein; SPTR: B6BNI7 Putative uncharacterized protein; hypothetical protein complement(985122..985448) Arcobacter nitrofigilis DSM 7299 9171152 YP_003655165.1 CDS Arnit_0995 NC_014166.1 985445 986812 R KEGG: sun:SUN_1440 hypothetical protein; SPTR: B6BNI6 Putative uncharacterized protein; PFAM: Replication initiation factor; hypothetical protein complement(985445..986812) Arcobacter nitrofigilis DSM 7299 9171153 YP_003655166.1 CDS Arnit_0996 NC_014166.1 986943 987203 R KEGG: sun:SUN_1441 hypothetical protein; SPTR: B6BNI2 Putative uncharacterized protein; hypothetical protein complement(986943..987203) Arcobacter nitrofigilis DSM 7299 9171154 YP_003655167.1 CDS Arnit_0997 NC_014166.1 987276 988295 R KEGG: hypothetical protein; SPTR: Q7RA63 Arabidopsis thaliana At1g71270/F3I17_8; hypothetical protein complement(987276..988295) Arcobacter nitrofigilis DSM 7299 9171155 YP_003655168.1 CDS Arnit_0998 NC_014166.1 988418 990292 D COGs: COG4928 P-loop ATPase; InterPro IPR011646; KEGG: bcl:ABC4089 hypothetical protein; PFAM: KAP P-loop domain protein; SPTR: C3F5H6 Putative uncharacterized protein; PFAM: KAP family P-loop domain; KAP P-loop domain-containing protein 988418..990292 Arcobacter nitrofigilis DSM 7299 9171156 YP_003655169.1 CDS Arnit_0999 NC_014166.1 990294 991058 D KEGG: bcl:ABC4088 hypothetical protein; SPTR: Q5WAJ1 Putative uncharacterized protein; hypothetical protein 990294..991058 Arcobacter nitrofigilis DSM 7299 9171157 YP_003655170.1 CDS Arnit_1000 NC_014166.1 991051 992391 D KEGG: bcl:ABC4087 hypothetical protein; SPTR: Q5WAJ2 Putative uncharacterized protein; hypothetical protein 991051..992391 Arcobacter nitrofigilis DSM 7299 9171158 YP_003655171.1 CDS Arnit_1001 NC_014166.1 992388 993134 D COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR012278:IPR018228; KEGG: lmo:lmo0313 hypothetical protein; PFAM: TatD-related deoxyribonuclease; SPTR: B7BEN7 Putative uncharacterized protein; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD-related deoxyribonuclease 992388..993134 Arcobacter nitrofigilis DSM 7299 9171159 YP_003655172.1 CDS Arnit_1002 NC_014166.1 993194 993766 D KEGG: cla:Cla_0876 hypothetical protein; SPTR: B9KCB3 Putative uncharacterized protein; hypothetical protein 993194..993766 Arcobacter nitrofigilis DSM 7299 9171160 YP_003655173.1 CDS Arnit_1003 NC_014166.1 993756 994124 D KEGG: hypothetical protein; SPTR: Q55G63 Putative uncharacterized protein; hypothetical protein 993756..994124 Arcobacter nitrofigilis DSM 7299 9171161 YP_003655174.1 CDS Arnit_1004 NC_014166.1 994134 994940 D InterPro IPR011335; KEGG: cjd:JJD26997_0356 hypothetical protein; SPTR: A6DAN5 Putative uncharacterized protein; PFAM: Restriction endonuclease; hypothetical protein 994134..994940 Arcobacter nitrofigilis DSM 7299 9171162 YP_003655175.1 CDS Arnit_1005 NC_014166.1 995167 996150 D COGs: COG2958 conserved hypothetical protein; InterPro IPR007468; KEGG: sun:SUN_1161 hypothetical protein; PFAM: protein of unknown function DUF511; SPTR: A6Q9F7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF511); hypothetical protein 995167..996150 Arcobacter nitrofigilis DSM 7299 9171163 YP_003655176.1 CDS Arnit_1006 NC_014166.1 996150 996446 D COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: mac:MA0102 nucleotidyltransferase; PFAM: DNA polymerase beta domain protein region; SPTR: Q8TUG5 Nucleotidyltransferase; PFAM: Nucleotidyltransferase domain; DNA polymerase beta domain-containing protein 996150..996446 Arcobacter nitrofigilis DSM 7299 9171164 YP_003655177.1 CDS Arnit_1007 NC_014166.1 996439 996798 D COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: mac:MA0101 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: Q8TUG6 UPF0331 protein MA_0101; PFAM: Protein of unknown function DUF86; hypothetical protein 996439..996798 Arcobacter nitrofigilis DSM 7299 9171165 YP_003655178.1 CDS Arnit_1008 NC_014166.1 996855 997193 D InterPro IPR012577; KEGG: bbt:BBta_5103 hypothetical protein; PFAM: NIPSNAP family containing protein; SPTR: A5ELQ7 Putative uncharacterized protein; PFAM: NIPSNAP; NIPSNAP family containing protein 996855..997193 Arcobacter nitrofigilis DSM 7299 9171166 YP_003655179.1 CDS Arnit_1009 NC_014166.1 997474 997974 D KEGG: hypothetical protein; SPTR: Q09F58 Heme maturase; hypothetical protein 997474..997974 Arcobacter nitrofigilis DSM 7299 9171167 YP_003655180.1 CDS Arnit_1010 NC_014166.1 997980 998192 D KEGG: hypothetical protein; SPTR: Q5CFB0 Putative uncharacterized protein; hypothetical protein 997980..998192 Arcobacter nitrofigilis DSM 7299 9171168 YP_003655181.1 CDS Arnit_1011 NC_014166.1 998714 999580 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR010499:IPR018060:IPR012287:IPR 020449:IPR018062:IPR011256:IPR009057; KEGG: vsa:VSAL_II0077 HTH-type transcriptional regulator, AraC-family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C2A189 DNA gyrase inhibitor; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(998714..999580) Arcobacter nitrofigilis DSM 7299 9171169 YP_003655182.1 CDS Arnit_1012 NC_014166.1 999723 999884 D KEGG: hypothetical protein similar to tRNA-pseudouridine synthase I; SPTR: A9DS70 Protein containing StAR-related lipid-transfer (START) domain; hypothetical protein 999723..999884 Arcobacter nitrofigilis DSM 7299 9171170 YP_003655183.1 CDS Arnit_1013 NC_014166.1 999889 1000287 R KEGG: ttu:TERTU_1117 hypothetical protein; SPTR: C1ZX43 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2721); hypothetical protein complement(999889..1000287) Arcobacter nitrofigilis DSM 7299 9171171 YP_003655184.1 CDS Arnit_1014 NC_014166.1 1000444 1002120 D COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR000559:IPR020628; KEGG: mca:MCA2219 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Q605Q9 Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase; Formate--tetrahydrofolate ligase 1000444..1002120 Arcobacter nitrofigilis DSM 7299 9171172 YP_003655185.1 CDS Arnit_1015 NC_014166.1 1002237 1003235 D COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR006059:IPR005673; KEGG: nam:NAMH_0308 phosphate ABC transporter, phosphate-binding protein PstS; PFAM: extracellular solute-binding protein family 1; SPTR: B9L7X3 Phosphate ABC transporter, phosphate-binding protein PstS; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein 1002237..1003235 Arcobacter nitrofigilis DSM 7299 9171173 YP_003655186.1 CDS Arnit_1016 NC_014166.1 1003354 1004313 D COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR011864; KEGG: nam:NAMH_0309 phosphate ABC transporter, permease protein PstC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6DAS3 Phosphate ABC transporter, permease protein PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease 1003354..1004313 Arcobacter nitrofigilis DSM 7299 9171174 YP_003655187.1 CDS Arnit_1017 NC_014166.1 1004313 1005116 D COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: sun:SUN_2270 phosphate ABC transporter, permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6QCK1 Phosphate ABC transporter, permease; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter permease 1004313..1005116 Arcobacter nitrofigilis DSM 7299 9171175 YP_003655188.1 CDS Arnit_1018 NC_014166.1 1005122 1005904 D COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR003439:IPR003593:IPR017871:IPR018087:IPR 005670:IPR015850; KEGG: nam:NAMH_0311 phosphate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9L7X6 Phosphate ABC transporter, ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate ABC transporter ATPase 1005122..1005904 Arcobacter nitrofigilis DSM 7299 9171176 YP_003655189.1 CDS Arnit_1019 NC_014166.1 1005967 1006476 R COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: abu:Abu_1537 putative FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: A8EV13 Putative FMN reductase; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(1005967..1006476) Arcobacter nitrofigilis DSM 7299 9171177 YP_003655190.1 CDS Arnit_1020 NC_014166.1 1006587 1007486 R COGs: COG0679 permease; InterPro IPR004776; KEGG: abu:Abu_1056 auxin efflux carrier protein; PFAM: Auxin Efflux Carrier; SPTR: A8ETP2 Auxin efflux carrier protein; PFAM: Membrane transport protein; auxin efflux carrier complement(1006587..1007486) Arcobacter nitrofigilis DSM 7299 9171178 YP_003655191.1 CDS Arnit_1021 NC_014166.1 1007610 1008296 R COGs: COG2071 glutamine amidotransferase; InterPro IPR011697:IPR017926; KEGG: nis:NIS_1377 glutamine amidotransferase, class I; PFAM: peptidase C26; SPTR: Q1N2L9 Predicted glutamine amidotransferase; PFAM: Peptidase C26; peptidase C26 complement(1007610..1008296) Arcobacter nitrofigilis DSM 7299 9171179 YP_003655192.1 CDS Arnit_1022 NC_014166.1 1008266 1009282 R KEGG: pin:Ping_2672 hypothetical protein; SPTR: A1SY20 Putative uncharacterized protein; PFAM: Putative amidoligase enzyme; hypothetical protein complement(1008266..1009282) Arcobacter nitrofigilis DSM 7299 9171180 YP_003655193.1 CDS Arnit_1023 NC_014166.1 1009400 1011340 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013163:IPR003594:IPR004358:IPR009082:IPR 005467; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV12 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(1009400..1011340) Arcobacter nitrofigilis DSM 7299 9171181 YP_003655194.1 CDS Arnit_1024 NC_014166.1 1011714 1013057 D COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: dze:Dd1591_0809 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; PRIAM: Glucarate dehydratase; SPTR: C8QLC1 Glucarate dehydratase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: glucarate dehydratase; glucarate dehydratase 1011714..1013057 Arcobacter nitrofigilis DSM 7299 9171182 YP_003655195.1 CDS Arnit_1025 NC_014166.1 1013077 1013976 D COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR013785; KEGG: bld:BLi03503 hypothetical protein; PFAM: dihydrodipicolinate synthetase; PRIAM: Dihydrodipicolinate synthase; SPTR: C9BB04 Dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 1013077..1013976 Arcobacter nitrofigilis DSM 7299 9171183 YP_003655196.1 CDS Arnit_1026 NC_014166.1 1014007 1014891 D COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterProIPR006115:IPR016040:IPR013328:IPR006183:IPR 002204:IPR008927:IPR006398; KEGG: dze:Dd1591_0811 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: C6CLQ3 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase 1014007..1014891 Arcobacter nitrofigilis DSM 7299 9171184 YP_003655197.1 CDS Arnit_1027 NC_014166.1 1014908 1015837 D COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR016040; KEGG: bpe:BP3543 putative D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: Q7VTJ3 Putative D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1014908..1015837 Arcobacter nitrofigilis DSM 7299 9171185 YP_003655198.1 CDS Arnit_1028 NC_014166.1 1015842 1016999 D COGs: COG1929 Glycerate kinase; InterPro IPR004381:IPR018193; KEGG: pwa:Pecwa_3551 glycerate kinase; PFAM: glycerate kinase; PRIAM: Glycerate kinase; SPTR: C6NEC2 Glycerate kinase; TIGRFAM: glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; glycerate kinase 1015842..1016999 Arcobacter nitrofigilis DSM 7299 9171186 YP_003655199.1 CDS Arnit_1029 NC_014166.1 1017087 1018136 D COGs: COG3181 conserved hypothetical protein; InterPro IPR001638; KEGG: oih:OB2837 hypothetical protein; PFAM: extracellular solute-binding protein family 3; SPTR: C0WAH6 Predicted protein; family 3 extracellular solute-binding protein 1017087..1018136 Arcobacter nitrofigilis DSM 7299 9171187 YP_003655200.1 CDS Arnit_1030 NC_014166.1 1018249 1018692 D KEGG: msu:MS0071 hypothetical protein; SPTR: C0WAH5 Predicted protein; hypothetical protein 1018249..1018692 Arcobacter nitrofigilis DSM 7299 9171188 YP_003655201.1 CDS Arnit_1031 NC_014166.1 1018745 1020244 D COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: oih:OB2838 hypothetical protein; PFAM: protein of unknown function DUF112 transmembrane; SPTR: C5EVR5 Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctA family; hypothetical protein 1018745..1020244 Arcobacter nitrofigilis DSM 7299 9171189 YP_003655202.1 CDS Arnit_1032 NC_014166.1 1020256 1021788 D COGs: COG2721 Altronate dehydratase; InterPro IPR013974:IPR007392:IPR017654; KEGG: rpf:Rpic12D_4582 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; PRIAM: Galactarate dehydratase; SPTR: B5SCJ9 D-galactarate dehydratase (D-galactarate dehydrogenase) protein; TIGRFAM: galactarate dehydratase; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase; galactarate dehydratase 1020256..1021788 Arcobacter nitrofigilis DSM 7299 9171190 YP_003655203.1 CDS Arnit_1033 NC_014166.1 1021810 1022643 D InterPro IPR006016:IPR014729:IPR006015; KEGG: cff:CFF8240_1256 hypothetical protein; PFAM: UspA domain protein; SPTR: A0RQC9 Putative uncharacterized protein; PFAM: Universal stress protein family; UspA domain-containing protein 1021810..1022643 Arcobacter nitrofigilis DSM 7299 9171191 YP_003655204.1 CDS Arnit_1034 NC_014166.1 1022711 1023400 D COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: rlt:Rleg2_5406 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: B6A1V2 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator 1022711..1023400 Arcobacter nitrofigilis DSM 7299 9171192 YP_003655205.1 CDS Arnit_1035 NC_014166.1 1023440 1024891 D COGs: COG0469 Pyruvate kinase; InterProIPR015793:IPR015794:IPR015813:IPR015795:IPR 011037:IPR001697; KEGG: abu:Abu_0258 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: A8ERF9 Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 1023440..1024891 Arcobacter nitrofigilis DSM 7299 9171193 YP_003655206.1 CDS Arnit_1036 NC_014166.1 1024897 1025583 R KEGG: tdn:Suden_1830 hypothetical protein; SPTR: Q30PH7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541); hypothetical protein complement(1024897..1025583) Arcobacter nitrofigilis DSM 7299 9171194 YP_003655207.1 CDS Arnit_1037 NC_014166.1 1026146 1026820 R InterPro IPR014955; KEGG: vsp:VS_1733 hypothetical protein; PFAM: Protein of unknown function DUF1826; SPTR: Q1YPX1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1826); hypothetical protein complement(1026146..1026820) Arcobacter nitrofigilis DSM 7299 9171195 YP_003655208.1 CDS Arnit_1038 NC_014166.1 1026842 1027108 R KEGG: DNA double-strand break repair Rad50 ATPase); K10866 DNA repair protein RAD50; SPTR: B0E7F9 DNA double-strand break repair Rad50 ATPase, putative; DNA double-strand break repair Rad50 ATPase complement(1026842..1027108) Arcobacter nitrofigilis DSM 7299 9171196 YP_003655209.1 CDS Arnit_1039 NC_014166.1 1027127 1027381 R KEGG: abu:Abu_0122 hypothetical protein; SPTR: A8ER33 Putative uncharacterized protein; PFAM: Uncharacterized protein containing a Zn-ribbon (DUF2116); hypothetical protein complement(1027127..1027381) Arcobacter nitrofigilis DSM 7299 9171197 YP_003655210.1 CDS Arnit_1040 NC_014166.1 1027413 1027772 R COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: abu:Abu_2116 DnaK suppressor protein DksA; PFAM: zinc finger DksA/TraR C4-type; SPTR: A8EWK7 DnaK suppressor protein DksA; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator complement(1027413..1027772) Arcobacter nitrofigilis DSM 7299 9171198 YP_003655211.1 CDS Arnit_1041 NC_014166.1 1027788 1028690 R COGs: COG0807 GTP cyclohydrolase II; InterPro IPR002496:IPR000926; KEGG: abu:Abu_1237 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase., GTP cyclohydrolase II; SPTR: A8EU70 GTP cyclohydrolase-2; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: GTP cyclohydrolase II; GTP cyclohydrolase II complement(1027788..1028690) Arcobacter nitrofigilis DSM 7299 9171199 YP_003655212.1 CDS Arnit_1043 NC_014166.1 1029361 1030503 R COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893:IPR017508; KEGG: glo:Glov_3688 HipA N-terminal domain protein; PFAM: HipA domain protein; SPTR: B3EBV5 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain; HipA N-terminal domain-containing protein complement(1029361..1030503) Arcobacter nitrofigilis DSM 7299 9171201 YP_003655213.1 CDS Arnit_1044 NC_014166.1 1030496 1030735 R InterPro IPR001387:IPR010982; KEGG: gem:GM21_0820 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A3J9R8 Transcriptional regulator, XRE family protein; PFAM: Helix-turn-helix; XRE family transcriptional regulator complement(1030496..1030735) Arcobacter nitrofigilis DSM 7299 9171202 YP_003655214.1 CDS Arnit_1045 NC_014166.1 1030831 1031070 R KEGG: sun:SUN_2452 phage integrase family site specific recombinase; SPTR: A6QD27 Site-specific recombinase, phage integrase family; phage integrase family site specific recombinase complement(1030831..1031070) Arcobacter nitrofigilis DSM 7299 9171203 YP_003655215.1 CDS Arnit_1046 NC_014166.1 1031222 1032325 D COGs: COG0012 GTPase probable translation factor; InterProIPR002917:IPR013029:IPR004396:IPR012675:IPR 006073:IPR012676; KEGG: abu:Abu_0733 GTP-binding protein, putative; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related; SPTR: A8ESS4 GTP-binding protein, putative; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein YchF 1031222..1032325 Arcobacter nitrofigilis DSM 7299 9171204 YP_003655216.1 CDS Arnit_1047 NC_014166.1 1032425 1034356 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013163:IPR003594:IPR004358:IPR009082:IPR 005467; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV12 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 1032425..1034356 Arcobacter nitrofigilis DSM 7299 9171205 YP_003655217.1 CDS Arnit_1048 NC_014166.1 1034467 1037025 D InterPro IPR002545:IPR019825; KEGG: abu:Abu_0777 CheW-like chemotaxis protein; SMART: CheW domain protein; SPTR: A8ESW8 CheW-like chemotaxis protein; PFAM: CheW-like domain; CheW protein 1034467..1037025 Arcobacter nitrofigilis DSM 7299 9171206 YP_003655218.1 CDS Arnit_1049 NC_014166.1 1037039 1037656 R KEGG: abu:Abu_0735 putative recombination protein RecO; SPTR: A8ESS6 Putative uncharacterized protein; putative recombination protein RecO complement(1037039..1037656) Arcobacter nitrofigilis DSM 7299 9171207 YP_003655219.1 CDS Arnit_1050 NC_014166.1 1037657 1037914 R KEGG: abu:Abu_0736 hypothetical protein; SPTR: A8ESS7 Putative uncharacterized protein; hypothetical protein complement(1037657..1037914) Arcobacter nitrofigilis DSM 7299 9171208 YP_003655220.1 CDS Arnit_1051 NC_014166.1 1038027 1038341 D COGs: COG3123 conserved hypothetical protein; InterPro IPR009664; KEGG: abu:Abu_0737 hypothetical protein; PFAM: protein of unknown function DUF1255; SPTR: A8ESS8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1255); hypothetical protein 1038027..1038341 Arcobacter nitrofigilis DSM 7299 9171209 YP_003655221.1 CDS Arnit_1052 NC_014166.1 1038363 1039031 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: abu:Abu_0792 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ESY3 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(1038363..1039031) Arcobacter nitrofigilis DSM 7299 9171210 YP_003655222.1 CDS Arnit_1053 NC_014166.1 1039033 1040076 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterProIPR001789:IPR003661:IPR003594:IPR011006:IPR 005467; KEGG: abu:Abu_0793 two component system histidine kinase/response regulator fusion protein; PFAM: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: A8ESY4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; response regulator receiver sensor signal transduction histidine kinase complement(1039033..1040076) Arcobacter nitrofigilis DSM 7299 9171211 YP_003655223.1 CDS Arnit_1054 NC_014166.1 1040152 1042449 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003661:IPR003594:IPR001789:IPR 004358:IPR011006:IPR009082:IPR005467; KEGG: abu:Abu_0794 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: A8ESY5 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; integral membrane sensor hybrid histidine kinase 1040152..1042449 Arcobacter nitrofigilis DSM 7299 9171212 YP_003655224.1 CDS Arnit_1055 NC_014166.1 1042543 1043820 D COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR017777; KEGG: abu:Abu_0799 UreA/short-chain amide ABC transporter, periplasmic UreA/short-chain amide-binding protein; SPTR: A8ESZ0 Urea/short-chain amide ABC transporter, periplasmic urea/short-chain amide-binding protein; TIGRFAM: urea ABC transporter, urea binding protein; TIGRFAM: urea ABC transporter, urea binding protein; urea ABC transporter urea binding protein 1042543..1043820 Arcobacter nitrofigilis DSM 7299 9171213 YP_003655225.1 CDS Arnit_1056 NC_014166.1 1043885 1045480 D COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851:IPR017779; KEGG: abu:Abu_0800 UreA/short-chain amide ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: A8ESZ1 Urea/short-chain amide ABC transporter, permease protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; urea ABC transporter permease UrtB 1043885..1045480 Arcobacter nitrofigilis DSM 7299 9171214 YP_003655226.1 CDS Arnit_1057 NC_014166.1 1045484 1046596 D COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851:IPR002355:IPR017778; KEGG: abu:Abu_0801 ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: A8ESZ2 ABC transporter, permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; urea ABC transporter permease UrtC 1045484..1046596 Arcobacter nitrofigilis DSM 7299 9171215 YP_003655227.1 CDS Arnit_1058 NC_014166.1 1046596 1047384 D COGs: COG4674 Uncharacterized ABC-type transport system ATPase component; InterPro IPR003439:IPR017781; KEGG: abu:Abu_0802 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SPTR: A8ESZ3 ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; urea ABC transporter ATP-binding protein UrtD 1046596..1047384 Arcobacter nitrofigilis DSM 7299 9171216 YP_003655228.1 CDS Arnit_1059 NC_014166.1 1047508 1048203 D COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017780; KEGG: abu:Abu_0803 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ESZ4 ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; urea ABC transporter ATP-binding protein UrtE 1047508..1048203 Arcobacter nitrofigilis DSM 7299 9171217 YP_003655229.1 CDS Arnit_1060 NC_014166.1 1048215 1048967 D COGs: COG0829 Urease accessory protein UreH; InterPro IPR002669; KEGG: abu:Abu_0805 urease accessory protein UreD; PFAM: Urease accessory protein UreD; SPTR: A8ESZ6 Urease accessory protein ureD; PFAM: UreD urease accessory protein; urease accessory protein UreD 1048215..1048967 Arcobacter nitrofigilis DSM 7299 9171218 YP_003655230.1 CDS Arnit_1061 NC_014166.1 1049050 1050216 D COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: chl:Chy400_1879 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: B9LEU2 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1049050..1050216 Arcobacter nitrofigilis DSM 7299 9171219 YP_003655231.1 CDS Arnit_1062 NC_014166.1 1050234 1051073 D COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: ctc:CTC02162 metal dependent hydrolase; SPTR: C6PQN4 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; metal dependent hydrolase 1050234..1051073 Arcobacter nitrofigilis DSM 7299 9171220 YP_003655232.1 CDS Arnit_1063 NC_014166.1 1051115 1051843 R COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: pin:Ping_2429 ABC transporter for histidine/lysine/arginine/ornithine ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C9PHF4 Putative amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(1051115..1051843) Arcobacter nitrofigilis DSM 7299 9171221 YP_003655233.1 CDS Arnit_1064 NC_014166.1 1051830 1052480 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: tau:Tola_1983 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C4L7G6 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit complement(1051830..1052480) Arcobacter nitrofigilis DSM 7299 9171222 YP_003655234.1 CDS Arnit_1065 NC_014166.1 1052482 1053162 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: pin:Ping_2431 ABC polar amino acid transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C9PHF2 ABC polar amino acid transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit complement(1052482..1053162) Arcobacter nitrofigilis DSM 7299 9171223 YP_003655235.1 CDS Arnit_1066 NC_014166.1 1053238 1054020 R COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: mms:mma_0036 ABC transporter substrate binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: A6STV0 ABC transporter substrate binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; family 3 extracellular solute-binding protein complement(1053238..1054020) Arcobacter nitrofigilis DSM 7299 9171224 YP_003655236.1 CDS Arnit_1067 NC_014166.1 1054272 1054967 D COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: psa:PST_3088 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: A4VP25 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator 1054272..1054967 Arcobacter nitrofigilis DSM 7299 9171225 YP_003655237.1 CDS Arnit_1068 NC_014166.1 1054984 1055988 D COGs: COG4266 Allantoicase; InterPro IPR015908:IPR005164:IPR008979; KEGG: pfo:Pfl01_1704 allantoicase; PFAM: Allantoicase region; PRIAM: Allantoicase; SPTR: C8PUG8 Allantoicase; TIGRFAM: allantoicase; PFAM: Allantoicase repeat; TIGRFAM: allantoicase; allantoicase 1054984..1055988 Arcobacter nitrofigilis DSM 7299 9171226 YP_003655238.1 CDS Arnit_1069 NC_014166.1 1055985 1056500 D COGs: COG3194 Ureidoglycolate hydrolase; InterPro IPR007247; KEGG: pap:PSPA7_3821 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; PRIAM: Ureidoglycolate hydrolase; SPTR: A6CZ51 Ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; ureidoglycolate hydrolase 1055985..1056500 Arcobacter nitrofigilis DSM 7299 9171227 YP_003655239.1 CDS Arnit_1070 NC_014166.1 1056601 1057281 D COGs: COG0832 Urea amidohydrolase (urease) beta subunit; InterPro IPR002026:IPR002019:IPR008223; KEGG: abu:Abu_0806 fusion of urease beta and gamma subunits; PFAM: Urease gamma subunit region; Urease beta subunit; PRIAM: Urease; SPTR: A8ESZ7 Fusion of urease beta and gamma subunits; TIGRFAM: urease, gamma subunit; urease, beta subunit; PFAM: Urease beta subunit; Urease, gamma subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit; urease subunit gamma 1056601..1057281 Arcobacter nitrofigilis DSM 7299 9171228 YP_003655240.1 CDS Arnit_1071 NC_014166.1 1057283 1058986 D COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; InterProIPR011612:IPR006680:IPR017952:IPR017950:IPR 011059:IPR005848:IPR017951; KEGG: abu:Abu_0807 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein; PRIAM: Urease; SPTR: A8ESZ8 Urease subunit beta; TIGRFAM: urease, alpha subunit; PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit; urease subunit alpha 1057283..1058986 Arcobacter nitrofigilis DSM 7299 9171229 YP_003655241.1 CDS Arnit_1072 NC_014166.1 1058996 1059442 D COGs: COG2371 Urease accessory protein UreE; InterPro IPR007864; KEGG: abu:Abu_0808 urease accessory protein; PFAM: UreE urease accessory domain protein; SPTR: A8ESZ9 Urease accessory protein ureE; PFAM: UreE urease accessory protein, C-terminal domain; UreE urease accessory domain-containing protein 1058996..1059442 Arcobacter nitrofigilis DSM 7299 9171230 YP_003655242.1 CDS Arnit_1073 NC_014166.1 1059417 1060115 D COGs: COG0830 Urease accessory protein UreF; KEGG: abu:Abu_0809 urease complex component; SPTR: A8ET00 Urease complex component; PFAM: UreF; urease complex component 1059417..1060115 Arcobacter nitrofigilis DSM 7299 9171231 YP_003655243.1 CDS Arnit_1074 NC_014166.1 1060125 1060712 D COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR003495:IPR012202:IPR004400; KEGG: abu:Abu_0810 urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; SPTR: A8ET01 Urease accessory protein ureG; TIGRFAM: urease accessory protein UreG; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG; urease accessory protein UreG 1060125..1060712 Arcobacter nitrofigilis DSM 7299 9171232 YP_003655244.1 CDS Arnit_1075 NC_014166.1 1060732 1061121 R COGs: COG0848 Biopolymer transport protein; InterPro IPR003400:IPR000871; KEGG: abu:Abu_0380 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ERT1 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(1060732..1061121) Arcobacter nitrofigilis DSM 7299 9171233 YP_003655245.1 CDS Arnit_1076 NC_014166.1 1061118 1061627 R COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: abu:Abu_0381 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8ERT2 Biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(1061118..1061627) Arcobacter nitrofigilis DSM 7299 9171234 YP_003655246.1 CDS Arnit_1077 NC_014166.1 1061634 1062344 R COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: abu:Abu_0703 TonB-dependent receptor protein; PFAM: Gram-negative tonB protein; SPTR: A8ESP4 TonB-dependent receptor protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB family protein complement(1061634..1062344) Arcobacter nitrofigilis DSM 7299 9171235 YP_003655247.1 CDS Arnit_1078 NC_014166.1 1062452 1063282 D COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR000728:IPR016188; KEGG: abu:Abu_0740 thiamine monophosphate kinase; PFAM: AIR synthase related protein; SPTR: A8EST1 Thiamine monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase; AIR synthase-like protein 1062452..1063282 Arcobacter nitrofigilis DSM 7299 9171236 YP_003655248.1 CDS Arnit_1079 NC_014166.1 1063292 1064380 D COGs: COG0585 conserved hypothetical protein; InterPro IPR001656:IPR020103:IPR011760; KEGG: abu:Abu_0741 tRNA pseudouridine synthase D; PFAM: tRNA pseudouridine synthase D TruD; SPTR: A8EST2 tRNA pseudouridine synthase D; PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: conserved hypothetical protein TIGR00094; tRNA pseudouridine synthase D TruD 1063292..1064380 Arcobacter nitrofigilis DSM 7299 9171237 YP_003655249.1 CDS Arnit_1080 NC_014166.1 1064471 1064806 D KEGG: abu:Abu_0742 hypothetical protein; SPTR: A8EST3 Putative uncharacterized protein; hypothetical protein 1064471..1064806 Arcobacter nitrofigilis DSM 7299 9171238 YP_003655250.1 CDS Arnit_1081 NC_014166.1 1064821 1067007 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004090; KEGG: abu:Abu_0743 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EST4 Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Protein of unknown function (DUF3365); methyl-accepting chemotaxis sensory transducer complement(1064821..1067007) Arcobacter nitrofigilis DSM 7299 9171239 YP_003655251.1 CDS Arnit_1082 NC_014166.1 1067093 1067653 D COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterProIPR013849:IPR011114:IPR003583:IPR012340:IPR 010994:IPR016027:IPR000085; KEGG: abu:Abu_0744 Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SPTR: A8EST5 Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase RuvA 1067093..1067653 Arcobacter nitrofigilis DSM 7299 9171240 YP_003655252.1 CDS Arnit_1083 NC_014166.1 1067673 1068707 D COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterProIPR011127:IPR011095:IPR013817:IPR013816:IPR 000291:IPR016185:IPR005905:IPR011761; KEGG: abu:Abu_0745 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: A8EST6 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 1067673..1068707 Arcobacter nitrofigilis DSM 7299 9171241 YP_003655253.1 CDS Arnit_1084 NC_014166.1 1068711 1069430 D COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: abu:Abu_0746 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: A8EST7 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1068711..1069430 Arcobacter nitrofigilis DSM 7299 9171242 YP_003655254.1 CDS Arnit_1085 NC_014166.1 1069417 1070853 D COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR013221:IPR004101; KEGG: abu:Abu_0747 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8EST8 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; PFAM: Mur ligase middle domain; Mur ligase middle domain-containing protein 1069417..1070853 Arcobacter nitrofigilis DSM 7299 9171243 YP_003655255.1 CDS Arnit_1086 NC_014166.1 1070898 1071254 D InterPro IPR012657; KEGG: coc:Coch_0989 hypothetical protein; SPTR: C3QEB2 Putative uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436; hypothetical protein 1070898..1071254 Arcobacter nitrofigilis DSM 7299 9171244 YP_003655256.1 CDS Arnit_1087 NC_014166.1 1071306 1071797 D COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011151:IPR011146; KEGG: abu:Abu_0748 HIT family protein; PFAM: histidine triad (HIT) protein; SPTR: A8EST9 HIT family protein; PFAM: HIT domain; histidine triad (HIT) protein 1071306..1071797 Arcobacter nitrofigilis DSM 7299 9171245 YP_003655257.1 CDS Arnit_1088 NC_014166.1 1071807 1072349 D KEGG: hypothetical protein similar to normocyte-binding protein 1; SPTR: Q8WRS5 Normocyte-binding protein 1; hypothetical protein 1071807..1072349 Arcobacter nitrofigilis DSM 7299 9171246 YP_003655258.1 CDS Arnit_1089 NC_014166.1 1072999 1073358 D COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175:IPR013813; KEGG: pzu:PHZ_c2373 translation initiation inhibitor, YjgF family; PFAM: Endoribonuclease L-PSP; SPTR: B4RFW9 Translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 1072999..1073358 Arcobacter nitrofigilis DSM 7299 9171247 YP_003655259.1 CDS Arnit_1090 NC_014166.1 1073471 1074712 D COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: hpb:HELPY_0929 putative D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: C7BYZ0 Putative D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; D-amino-acid dehydrogenase 1073471..1074712 Arcobacter nitrofigilis DSM 7299 9171248 YP_003655260.1 CDS Arnit_1091 NC_014166.1 1074732 1076066 D COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR003607:IPR006261; KEGG: tdn:Suden_0745 deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PRIAM: dGTPase; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q30SK7 Deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; deoxyguanosinetriphosphate triphosphohydrolase 1074732..1076066 Arcobacter nitrofigilis DSM 7299 9171249 YP_003655261.1 CDS Arnit_1092 NC_014166.1 1076072 1076320 R InterPro IPR001387:IPR010982; KEGG: cff:CFF8240_0305 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q4HG65 Helix-turn-helix domain protein; PFAM: Helix-turn-helix; XRE family transcriptional regulator complement(1076072..1076320) Arcobacter nitrofigilis DSM 7299 9171250 YP_003655262.1 CDS Arnit_1093 NC_014166.1 1076600 1076911 D KEGG: tdn:Suden_0985 histidine kinase; SPTR: Q30RW8 Sensor protein; hypothetical protein 1076600..1076911 Arcobacter nitrofigilis DSM 7299 9171251 YP_003655263.1 CDS Arnit_1094 NC_014166.1 1077121 1079448 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_0632 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESH3 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 1077121..1079448 Arcobacter nitrofigilis DSM 7299 9171252 YP_003655264.1 CDS Arnit_1095 NC_014166.1 1079455 1080090 R InterPro IPR016181:IPR000182; KEGG: hypothetical protein; SPTR: Q1JYH4 Putative uncharacterized protein; hypothetical protein complement(1079455..1080090) Arcobacter nitrofigilis DSM 7299 9171253 YP_003655265.1 CDS Arnit_1096 NC_014166.1 1080093 1080359 R KEGG: abu:Abu_0736 hypothetical protein; SPTR: B6BJJ0 Putative uncharacterized protein; hypothetical protein complement(1080093..1080359) Arcobacter nitrofigilis DSM 7299 9171254 YP_003655266.1 CDS Arnit_1097 NC_014166.1 1080391 1080807 R KEGG: hypothetical protein; SPTR: Q8IDH7 Putative uncharacterized protein; hypothetical protein complement(1080391..1080807) Arcobacter nitrofigilis DSM 7299 9171255 YP_003655267.1 CDS Arnit_1099 NC_014166.1 1081193 1081951 R KEGG: son:SO_4391 hypothetical protein; SPTR: Q8E995 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2971); hypothetical protein complement(1081193..1081951) Arcobacter nitrofigilis DSM 7299 9171257 YP_003655268.1 CDS Arnit_1100 NC_014166.1 1081983 1082630 D COGs: COG2932 transcriptional regulator protein; InterPro IPR019759:IPR011056:IPR015927; KEGG: abu:Abu_1647 hypothetical protein; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: A8EVC1 Putative uncharacterized protein; PFAM: Peptidase S24-like; putative phage repressor 1081983..1082630 Arcobacter nitrofigilis DSM 7299 9171258 YP_003655269.1 CDS Arnit_1101 NC_014166.1 1082632 1083240 D KEGG: shl:Shal_0526 hypothetical protein; SPTR: B0TRC9 Putative uncharacterized protein; hypothetical protein 1082632..1083240 Arcobacter nitrofigilis DSM 7299 9171259 YP_003655270.1 CDS Arnit_1102 NC_014166.1 1083593 1083907 D COGs: COG0051 Ribosomal protein S10; InterPro IPR001848:IPR018268:IPR005731; KEGG: abu:Abu_0751 30S ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: A8ESU2 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 1083593..1083907 Arcobacter nitrofigilis DSM 7299 9171260 YP_003655271.1 CDS Arnit_1103 NC_014166.1 1083921 1084496 D COGs: COG0087 Ribosomal protein L3; InterPro IPR000597:IPR009000:IPR019927; KEGG: abu:Abu_0752 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: A8ESU3 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 1083921..1084496 Arcobacter nitrofigilis DSM 7299 9171261 YP_003655272.1 CDS Arnit_1104 NC_014166.1 1084493 1085080 D COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: abu:Abu_0753 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: A8ESU4 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family; 50S ribosomal protein L4 1084493..1085080 Arcobacter nitrofigilis DSM 7299 9171262 YP_003655273.1 CDS Arnit_1105 NC_014166.1 1085082 1085363 D COGs: COG0089 Ribosomal protein L23; InterPro IPR013025:IPR012677:IPR012678; KEGG: abu:Abu_0754 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: A8ESU5 50S ribosomal protein L23; PFAM: Ribosomal protein L23; 50S ribosomal protein L25 1085082..1085363 Arcobacter nitrofigilis DSM 7299 9171263 YP_003655274.1 CDS Arnit_1106 NC_014166.1 1085373 1086200 D COGs: COG0090 Ribosomal protein L2; InterProIPR002171:IPR012340:IPR014722:IPR008991:IPR 016027:IPR005880; KEGG: abu:Abu_0755 50S ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: A8ESU6 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 1085373..1086200 Arcobacter nitrofigilis DSM 7299 9171264 YP_003655275.1 CDS Arnit_1107 NC_014166.1 1086210 1086488 D COGs: COG0185 Ribosomal protein S19; InterPro IPR002222:IPR005732; KEGG: wsu:WS1712 30S ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: C3XK38 30s ribosomal subunit protein s19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 1086210..1086488 Arcobacter nitrofigilis DSM 7299 9171265 YP_003655276.1 CDS Arnit_1108 NC_014166.1 1086490 1086822 D COGs: COG0091 Ribosomal protein L22; InterPro IPR001063:IPR018260:IPR005727; KEGG: abu:Abu_0757 50S ribosomal protein L22; PFAM: ribosomal protein L22/L17; SPTR: A8ESU8 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 1086490..1086822 Arcobacter nitrofigilis DSM 7299 9171266 YP_003655277.1 CDS Arnit_1109 NC_014166.1 1086822 1087520 D COGs: COG0092 Ribosomal protein S3; InterProIPR008282:IPR004044:IPR001351:IPR004087:IPR 015946:IPR018280:IPR009019:IPR005704:IPR004088; KEGG: abu:Abu_0758 30S ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: A8ESU9 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 1086822..1087520 Arcobacter nitrofigilis DSM 7299 9171267 YP_003655278.1 CDS Arnit_1110 NC_014166.1 1087523 1087948 D COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR016180:IPR000114:IPR020798; KEGG: abu:Abu_0759 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: A8ESV0 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 1087523..1087948 Arcobacter nitrofigilis DSM 7299 9171268 YP_003655279.1 CDS Arnit_1111 NC_014166.1 1087935 1088126 D InterPro IPR001854:IPR018254; KEGG: abu:Abu_0760 50S ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: A8ESV1 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 1087935..1088126 Arcobacter nitrofigilis DSM 7299 9171269 YP_003655280.1 CDS Arnit_1112 NC_014166.1 1088138 1088392 D COGs: COG0186 Ribosomal protein S17; InterProIPR000266:IPR012340:IPR019979:IPR016027:IPR 019984; KEGG: abu:Abu_0761 30S ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: A8ESV2 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 1088138..1088392 Arcobacter nitrofigilis DSM 7299 9171270 YP_003655281.1 CDS Arnit_1113 NC_014166.1 1088392 1088760 D COGs: COG0093 Ribosomal protein L14; InterPro IPR000218:IPR019972:IPR005745; KEGG: abu:Abu_0762 50S ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; SPTR: A8ESV3 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 1088392..1088760 Arcobacter nitrofigilis DSM 7299 9171271 YP_003655282.1 CDS Arnit_1114 NC_014166.1 1088762 1089001 D InterPro IPR005824:IPR005825:IPR008991:IPR003256; KEGG: abu:Abu_0763 50S ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; SPTR: A8ESV4 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 1088762..1089001 Arcobacter nitrofigilis DSM 7299 9171272 YP_003655283.1 CDS Arnit_1115 NC_014166.1 1089003 1089551 D COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: abu:Abu_0764 50S ribosomal protein L5; PFAM: ribosomal protein L5; SPTR: A8ESV5 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 1089003..1089551 Arcobacter nitrofigilis DSM 7299 9171273 YP_003655284.1 CDS Arnit_1116 NC_014166.1 1089551 1089736 D COGs: COG0199 Ribosomal protein S14; InterPro IPR001209:IPR018271; KEGG: abu:Abu_0765 30S ribosomal protein S14; PFAM: ribosomal protein S14; SPTR: A8ESV6 30S ribosomal protein S14 type Z; PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 1089551..1089736 Arcobacter nitrofigilis DSM 7299 9171274 YP_003655285.1 CDS Arnit_1117 NC_014166.1 1089749 1090147 D COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: abu:Abu_0766 30S ribosomal protein S8; PFAM: ribosomal protein S8; SPTR: A8ESV7 30S ribosomal protein S8; PFAM: Ribosomal protein S8; 30S ribosomal protein S8 1089749..1090147 Arcobacter nitrofigilis DSM 7299 9171275 YP_003655286.1 CDS Arnit_1118 NC_014166.1 1090159 1090695 D COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040:IPR000702:IPR019906:IPR002358; KEGG: abu:Abu_0767 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: A8ESV8 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 1090159..1090695 Arcobacter nitrofigilis DSM 7299 9171276 YP_003655287.1 CDS Arnit_1119 NC_014166.1 1090706 1091065 D COGs: COG0256 Ribosomal protein L18; InterPro IPR005484:IPR004389; KEGG: abu:Abu_0768 50S ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; SPTR: A8ESV9 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 1090706..1091065 Arcobacter nitrofigilis DSM 7299 9171277 YP_003655288.1 CDS Arnit_1120 NC_014166.1 1091075 1091518 D COGs: COG0098 Ribosomal protein S5; InterProIPR013810:IPR005324:IPR014720:IPR014721:IPR 018192:IPR020568:IPR005712; KEGG: abu:Abu_0769 30S ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; SPTR: A8ESW0 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 1091075..1091518 Arcobacter nitrofigilis DSM 7299 9171278 YP_003655289.1 CDS Arnit_1121 NC_014166.1 1091522 1091920 D COGs: COG0200 Ribosomal protein L15; InterPro IPR001196:IPR005749; KEGG: abu:Abu_0770 50S ribosomal protein L15; PFAM: ribosomal protein L15; SPTR: A8ESW1 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 1091522..1091920 Arcobacter nitrofigilis DSM 7299 9171279 YP_003655290.1 CDS Arnit_1122 NC_014166.1 1091923 1093185 D COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: abu:Abu_0771 preprotein translocase subunit SecY; PFAM: SecY protein; SPTR: A8ESW2 Preprotein translocase secY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; preprotein translocase subunit SecY 1091923..1093185 Arcobacter nitrofigilis DSM 7299 9171280 YP_003655291.1 CDS Arnit_1123 NC_014166.1 1093191 1093949 D COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994:IPR001714:IPR002467; KEGG: abu:Abu_0772 methionine aminopeptidase; PFAM: peptidase M24; PRIAM: Methionyl aminopeptidase; SPTR: A8ESW3 Methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase 1093191..1093949 Arcobacter nitrofigilis DSM 7299 9171281 YP_003655292.1 CDS Arnit_1124 NC_014166.1 1093961 1094182 D COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR006196:IPR012340:IPR016027:IPR004368; KEGG: abu:Abu_0773 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: A8ESW4 Translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor IF-1 1093961..1094182 Arcobacter nitrofigilis DSM 7299 9171282 YP_003655293.1 CDS Arnit_1125 NC_014166.1 1094283 1095401 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_0615 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8ESF6 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1094283..1095401 Arcobacter nitrofigilis DSM 7299 9171283 YP_003655294.1 CDS Arnit_1126 NC_014166.1 1095483 1095704 R KEGG: cce:Ccel_1845 hypothetical protein; SPTR: B8I350 Putative uncharacterized protein; hypothetical protein complement(1095483..1095704) Arcobacter nitrofigilis DSM 7299 9171284 YP_003655295.1 CDS Arnit_1127 NC_014166.1 1095836 1096504 D COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: abu:Abu_0774 hypothetical protein; PFAM: Uracil-DNA glycosylase superfamily; SPTR: A8ESW5 Putative uncharacterized protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; uracil-DNA glycosylase superfamily 1095836..1096504 Arcobacter nitrofigilis DSM 7299 9171285 YP_003655296.1 CDS Arnit_1128 NC_014166.1 1096501 1097598 D KEGG: abu:Abu_0775 hypothetical protein; SPTR: A8ESW6 Putative uncharacterized protein; hypothetical protein 1096501..1097598 Arcobacter nitrofigilis DSM 7299 9171286 YP_003655297.1 CDS Arnit_1129 NC_014166.1 1097681 1099432 D COGs: COG0173 Aspartyl-tRNA synthetase; InterProIPR004365:IPR004364:IPR004115:IPR012340:IPR 002312:IPR016027:IPR004524:IPR006195; KEGG: abu:Abu_0776 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: A8ESW7 Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase 1097681..1099432 Arcobacter nitrofigilis DSM 7299 9171287 YP_003655298.1 CDS Arnit_1130 NC_014166.1 1099489 1100289 D COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: abu:Abu_1739 putative cation ABC transporter, periplasmic-binding protein; PFAM: periplasmic solute binding protein; SPTR: A8EVL3 Putative cation ABC transporter, periplasmic-binding protein; PFAM: Periplasmic solute binding protein family; periplasmic solute binding protein 1099489..1100289 Arcobacter nitrofigilis DSM 7299 9171288 YP_003655299.1 CDS Arnit_1131 NC_014166.1 1100291 1102021 D COGs: COG1032 Fe-S oxidoreductase; InterPro IPR013704:IPR007197:IPR006638; KEGG: abu:Abu_0778 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B6BK38 Fe-S oxidoreductase; PFAM: Radical SAM superfamily; Radical SAM N-terminal; radical SAM domain-containing protein 1100291..1102021 Arcobacter nitrofigilis DSM 7299 9171289 YP_003655300.1 CDS Arnit_1132 NC_014166.1 1102079 1102717 R COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850:IPR007862:IPR006259; KEGG: abu:Abu_0779 adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; SPTR: A8ESX0 Adenylate kinase; TIGRFAM: adenylate kinase; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase complement(1102079..1102717) Arcobacter nitrofigilis DSM 7299 9171290 YP_003655301.1 CDS Arnit_1133 NC_014166.1 1102831 1103400 D COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850; KEGG: abu:Abu_0780 adenylate kinase; PFAM: adenylate kinase; SPTR: A8ESX1 Adenylate kinase; PFAM: Adenylate kinase; adenylate kinase 1102831..1103400 Arcobacter nitrofigilis DSM 7299 9171291 YP_003655302.1 CDS Arnit_1134 NC_014166.1 1103400 1104155 D COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453; KEGG: abu:Abu_0781 molybdopterin binding domain-containing protein; PFAM: molybdopterin binding domain; SPTR: A8ESX2 Molybdopterin binding domain protein; PFAM: Probable molybdopterin binding domain; molybdopterin binding domain-containing protein 1103400..1104155 Arcobacter nitrofigilis DSM 7299 9171292 YP_003655303.1 CDS Arnit_1135 NC_014166.1 1104152 1104802 R COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597:IPR011990:IPR018130; KEGG: aas:Aasi_0852 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: C4IKZ6 Sel1 repeat family protein; PFAM: Sel1 repeat; Sel1 domain-containing protein repeat-containing protein complement(1104152..1104802) Arcobacter nitrofigilis DSM 7299 9171293 YP_003655304.1 CDS Arnit_1136 NC_014166.1 1104799 1105821 R COGs: COG0787 Alanine racemase; InterProIPR001608:IPR011079:IPR000821:IPR020622:IPR 009006; KEGG: abu:Abu_0786 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: A8ESX7 Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase complement(1104799..1105821) Arcobacter nitrofigilis DSM 7299 9171294 YP_003655305.1 CDS Arnit_1137 NC_014166.1 1105840 1107672 R COGs: COG0322 Nuclease subunit of the excinuclease complex; InterProIPR000305:IPR001943:IPR001162:IPR010994:IPR 009055:IPR004791; KEGG: abu:Abu_0787 excinuclease ABC subunit C; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: A8ESX8 UvrABC system protein C; TIGRFAM: excinuclease ABC, C subunit; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC subunit C complement(1105840..1107672) Arcobacter nitrofigilis DSM 7299 9171295 YP_003655306.1 CDS Arnit_1138 NC_014166.1 1107794 1108186 D InterPro IPR014347; KEGG: glo:Glov_3708 tautomerase; SPTR: C1SN26 Tautomerase enzyme; tautomerase 1107794..1108186 Arcobacter nitrofigilis DSM 7299 9171296 YP_003655307.1 CDS Arnit_1139 NC_014166.1 1108237 1108515 D InterPro IPR007138:IPR011008; KEGG: tdn:Suden_1481 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: C2AA30 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides; PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1108237..1108515 Arcobacter nitrofigilis DSM 7299 9171297 YP_003655308.1 CDS Arnit_1140 NC_014166.1 1108529 1108999 R InterPro IPR001623; KEGG: abu:Abu_1033 DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8ETL9 DnaJ domain protein; PFAM: DnaJ domain; heat shock protein DnaJ domain-containing protein complement(1108529..1108999) Arcobacter nitrofigilis DSM 7299 9171298 YP_003655309.1 CDS Arnit_1141 NC_014166.1 1109081 1111075 R COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: wsu:WS0108 GGDEF family protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: Q7MAP6 GGDEF FAMILY PROTEIN; PFAM: EAL domain; Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(1109081..1111075) Arcobacter nitrofigilis DSM 7299 9171299 YP_003655310.1 CDS Arnit_1142 NC_014166.1 1111338 1111604 D InterPro IPR001623:IPR003095; KEGG: abu:Abu_1034 DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8ETM0 DnaJ domain protein; PFAM: DnaJ domain; heat shock protein DnaJ domain-containing protein 1111338..1111604 Arcobacter nitrofigilis DSM 7299 9171300 YP_003655311.1 CDS Arnit_1143 NC_014166.1 1111616 1112485 D COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: dat:HRM2_37860 DraG2; PFAM: ADP-ribosylation/Crystallin J1; SPTR: B6BNN6 ADP-ribosylation/Crystallin J1, putative; PFAM: ADP-ribosylglycohydrolase; ADP-ribosylation/crystallin J1 1111616..1112485 Arcobacter nitrofigilis DSM 7299 9171301 YP_003655312.1 CDS Arnit_1144 NC_014166.1 1112495 1113118 R COGs: COG3531 protein-disulfide isomerase; InterPro IPR012336; KEGG: tdn:Suden_1963 DsbA oxidoreductase; SPTR: Q30P44 DSBA oxidoreductase; PFAM: DSBA-like thioredoxin domain; DsbA oxidoreductase complement(1112495..1113118) Arcobacter nitrofigilis DSM 7299 9171302 YP_003655313.1 CDS Arnit_1145 NC_014166.1 1113218 1113658 D KEGG: abu:Abu_0091 hypothetical protein; SPTR: A8ER02 Putative uncharacterized protein; PFAM: Phosphate-starvation-inducible E; hypothetical protein 1113218..1113658 Arcobacter nitrofigilis DSM 7299 9171303 YP_003655314.1 CDS Arnit_1146 NC_014166.1 1113648 1114532 D COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: nmr:Nmar_0201 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0EXF5 Fe-S oxidoreductase; PFAM: Radical SAM superfamily; radical SAM domain-containing protein 1113648..1114532 Arcobacter nitrofigilis DSM 7299 9171304 YP_003655315.1 CDS Arnit_1147 NC_014166.1 1114540 1114743 R KEGG: hypothetical protein LOC100009749; SPTR: A6PV85 Chromosome segregation ATPases-like protein (Fragment); hypothetical protein complement(1114540..1114743) Arcobacter nitrofigilis DSM 7299 9171305 YP_003655316.1 CDS Arnit_1148 NC_014166.1 1114904 1115359 D InterPro IPR018873; KEGG: cbs:COXBURSA331_A1986 hypothetical protein; PFAM: KilA-N, DNA-binding domain; SPTR: C0GPK4 Putative uncharacterized protein; PFAM: ORF6N domain; DNA-binding domain-containing protein 1114904..1115359 Arcobacter nitrofigilis DSM 7299 9171306 YP_003655317.1 CDS Arnit_1151 NC_014166.1 1116838 1117278 D KEGG: ftn:FTN_0863 hypothetical protein; SPTR: A0Q686 Hypothetical membrane protein; hypothetical protein 1116838..1117278 Arcobacter nitrofigilis DSM 7299 9171309 YP_003655318.1 CDS Arnit_1152 NC_014166.1 1117331 1118116 R COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: abu:Abu_0821 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: A8ET12 Exodeoxyribonuclease; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); exodeoxyribonuclease III complement(1117331..1118116) Arcobacter nitrofigilis DSM 7299 9171310 YP_003655319.1 CDS Arnit_1153 NC_014166.1 1118205 1118870 R COGs: COG1225 Peroxiredoxin; InterPro IPR000866:IPR012335:IPR012336:IPR017936; KEGG: dsa:Desal_2200 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: B4VKQ6 Redoxin superfamily; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(1118205..1118870) Arcobacter nitrofigilis DSM 7299 9171311 YP_003655320.1 CDS Arnit_1154 NC_014166.1 1119005 1119721 D InterPro IPR002781; KEGG: abu:Abu_0823 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: A8ET14 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 1119005..1119721 Arcobacter nitrofigilis DSM 7299 9171312 YP_003655321.1 CDS Arnit_1155 NC_014166.1 1119732 1120004 R KEGG: abu:Abu_0822 hypothetical protein; SPTR: A8ET13 Putative uncharacterized protein; hypothetical protein complement(1119732..1120004) Arcobacter nitrofigilis DSM 7299 9171313 YP_003655322.1 CDS Arnit_1156 NC_014166.1 1120015 1120929 R COGs: COG0679 permease; InterPro IPR004776; KEGG: abu:Abu_0836 auxin efflux carrier protein, putative; PFAM: Auxin Efflux Carrier; SPTR: A8ET27 Auxin efflux carrier protein, putative; PFAM: Membrane transport protein; auxin efflux carrier complement(1120015..1120929) Arcobacter nitrofigilis DSM 7299 9171314 YP_003655323.1 CDS Arnit_1157 NC_014166.1 1121049 1122485 D COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: abu:Abu_1584 sodium:alanine symporter; PFAM: sodium:alanine symporter; SPTR: A8EV59 Sodium:alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; amino acid carrier protein 1121049..1122485 Arcobacter nitrofigilis DSM 7299 9171315 YP_003655324.1 CDS Arnit_1158 NC_014166.1 1122534 1123658 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR004358:IPR005467; KEGG: abu:Abu_1583 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV58 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 1122534..1123658 Arcobacter nitrofigilis DSM 7299 9171316 YP_003655325.1 CDS Arnit_1159 NC_014166.1 1123661 1124347 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011991:IPR011006; KEGG: abu:Abu_1582 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EV57 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator receiver protein 1123661..1124347 Arcobacter nitrofigilis DSM 7299 9171317 YP_003655326.1 CDS Arnit_1160 NC_014166.1 1124353 1125225 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR000160:IPR011006; KEGG: cyt:cce_4578 two-component response regulator; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: response regulator receiver; GGDEF domain containing protein; SPTR: A3IRP4 Response regulator receiver domain protein (CheY-like); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase complement(1124353..1125225) Arcobacter nitrofigilis DSM 7299 9171318 YP_003655327.1 CDS Arnit_1161 NC_014166.1 1125228 1128779 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR004010:IPR003661:IPR003594:IPR001789:IPR 004358:IPR011006:IPR009082:IPR008207:IPR005467; KEGG: wsu:WS0850 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Cache domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: Q7M9K6 Sensor protein; PFAM: Cache domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; multi-sensor hybrid histidine kinase complement(1125228..1128779) Arcobacter nitrofigilis DSM 7299 9171319 YP_003655328.1 CDS Arnit_1162 NC_014166.1 1128783 1130384 R COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR015421:IPR015424; KEGG: ctc:CTC01478 putative histidine decarboxylase; SPTR: Q894Q7 Putative histidine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase conserved domain; putative histidine decarboxylase complement(1128783..1130384) Arcobacter nitrofigilis DSM 7299 9171320 YP_003655329.1 CDS Arnit_1163 NC_014166.1 1130524 1131348 D KEGG: abu:Abu_0950 hypothetical protein; SPTR: A8ETD6 Putative uncharacterized protein; hypothetical protein 1130524..1131348 Arcobacter nitrofigilis DSM 7299 9171321 YP_003655330.1 CDS Arnit_1164 NC_014166.1 1131497 1132084 D COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: dde:Dde_1618 flavodoxin-like fold domain-containing protein; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: C8QMT1 NAD(P)H dehydrogenase (Quinone); PFAM: Flavodoxin-like fold; NAD(P)H dehydrogenase 1131497..1132084 Arcobacter nitrofigilis DSM 7299 9171322 YP_003655331.1 CDS Arnit_1165 NC_014166.1 1132079 1132981 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR009594:IPR000005:IPR018060:IPR012287:IPR 020449:IPR018062:IPR009057; KEGG: dsa:Desal_2270 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C6BWP6 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator complement(1132079..1132981) Arcobacter nitrofigilis DSM 7299 9171323 YP_003655332.1 CDS Arnit_1166 NC_014166.1 1133117 1133491 D COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR003779; KEGG: bph:Bphy_0944 carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; SPTR: C6NV25 Carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase family; carboxymuconolactone decarboxylase 1133117..1133491 Arcobacter nitrofigilis DSM 7299 9171324 YP_003655333.1 CDS Arnit_1167 NC_014166.1 1133481 1134491 D COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: bur:Bcep18194_A5379 isochorismatase hydrolase/endoribonuclease L-PSP; PFAM: isochorismatase hydrolase; SPTR: Q39EZ3 Isochorismatase hydrolase/Endoribonuclease L-PSP; PFAM: Isochorismatase family; isochorismatase hydrolase 1133481..1134491 Arcobacter nitrofigilis DSM 7299 9171325 YP_003655334.1 CDS Arnit_1168 NC_014166.1 1134539 1135393 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR018060:IPR012287:IPR018062:IPR 009057; KEGG: abu:Abu_2328 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EX63 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1134539..1135393 Arcobacter nitrofigilis DSM 7299 9171326 YP_003655335.1 CDS Arnit_1169 NC_014166.1 1135435 1136328 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR018060:IPR012287:IPR020449:IPR 009057; KEGG: fjo:Fjoh_1839 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A5FIU8 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1135435..1136328 Arcobacter nitrofigilis DSM 7299 9171327 YP_003655336.1 CDS Arnit_1170 NC_014166.1 1136418 1137581 D COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: npu:Npun_F6405 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C4D8N4 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1136418..1137581 Arcobacter nitrofigilis DSM 7299 9171328 YP_003655337.1 CDS Arnit_1171 NC_014166.1 1137774 1138949 D COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: npu:Npun_F6405 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: B2IY78 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1137774..1138949 Arcobacter nitrofigilis DSM 7299 9171329 YP_003655338.1 CDS Arnit_1172 NC_014166.1 1138975 1139283 R KEGG: pha:PSHAa2193 hypothetical protein; SPTR: Q1JYH7 Putative uncharacterized protein; hypothetical protein complement(1138975..1139283) Arcobacter nitrofigilis DSM 7299 9171330 YP_003655339.1 CDS Arnit_1173 NC_014166.1 1139344 1139949 R COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: tcx:Tcr_1884 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q31EE9 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator complement(1139344..1139949) Arcobacter nitrofigilis DSM 7299 9171331 YP_003655340.1 CDS Arnit_1174 NC_014166.1 1140067 1140366 D COGs: COG2350 conserved hypothetical protein; InterPro IPR005545:IPR011008; KEGG: dps:DP2485 hypothetical protein; PFAM: YCII-related; SPTR: Q6AKB2 Putative uncharacterized protein; PFAM: YCII-related domain; hypothetical protein 1140067..1140366 Arcobacter nitrofigilis DSM 7299 9171332 YP_003655341.1 CDS Arnit_1175 NC_014166.1 1140369 1141235 R COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: cts:Ctha_2428 NmrA family protein; PFAM: NmrA family protein; SPTR: B3QX67 NmrA family protein; PFAM: NmrA-like family; NmrA family protein complement(1140369..1141235) Arcobacter nitrofigilis DSM 7299 9171333 YP_003655342.1 CDS Arnit_1176 NC_014166.1 1141279 1142151 R COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: abu:Abu_1144 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: A8ETY0 Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1141279..1142151) Arcobacter nitrofigilis DSM 7299 9171334 YP_003655343.1 CDS Arnit_1177 NC_014166.1 1142242 1142832 D InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: abu:Abu_1145 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8ETY1 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1142242..1142832 Arcobacter nitrofigilis DSM 7299 9171335 YP_003655344.1 CDS Arnit_1178 NC_014166.1 1142829 1143569 D InterPro IPR016040; KEGG: pin:Ping_3626 dTDP-glucose 4,6-dehydratase; SPTR: A1T0P4 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1142829..1143569 Arcobacter nitrofigilis DSM 7299 9171336 YP_003655345.1 CDS Arnit_1179 NC_014166.1 1143585 1144436 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR018060:IPR012287:IPR020449:IPR 018062:IPR009057; KEGG: abu:Abu_2328 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EX63 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1143585..1144436 Arcobacter nitrofigilis DSM 7299 9171337 YP_003655346.1 CDS Arnit_1180 NC_014166.1 1144502 1145026 D COGs: COG1881 Phospholipid-binding protein; InterPro IPR008914:IPR005247; KEGG: abu:Abu_1052 hypothetical protein; PFAM: PEBP family protein; SPTR: A8ETN8 Putative uncharacterized protein; PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481; PEBP family protein 1144502..1145026 Arcobacter nitrofigilis DSM 7299 9171338 YP_003655347.1 CDS Arnit_1181 NC_014166.1 1145030 1145779 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: abu:Abu_2327 methyltransferase; PFAM: Methyltransferase type 11; SPTR: A8EX62 Methyltransferase; PFAM: Methyltransferase domain; type 11 methyltransferase 1145030..1145779 Arcobacter nitrofigilis DSM 7299 9171339 YP_003655348.1 CDS Arnit_1182 NC_014166.1 1145793 1147019 R InterPro IPR006597:IPR009739; KEGG: lpp:lpp2502 hypothetical protein; PFAM: protein of unknown function DUF1311; Sel1 domain protein repeat-containing protein; SPTR: C9NSH3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1311); hypothetical protein complement(1145793..1147019) Arcobacter nitrofigilis DSM 7299 9171340 YP_003655349.1 CDS Arnit_1183 NC_014166.1 1147091 1147918 R COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; KEGG: hhe:HH1514 hypothetical protein; SPTR: B6BHF2 Putative uncharacterized protein; PFAM: NMT1/THI5 like; hypothetical protein complement(1147091..1147918) Arcobacter nitrofigilis DSM 7299 9171341 YP_003655350.1 CDS Arnit_1184 NC_014166.1 1147928 1149052 R COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006090:IPR013786:IPR006091:IPR 013764:IPR009100:IPR009075; KEGG: cha:CHAB381_1168 putative acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: B6BHF3 Putative acyl-coa dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(1147928..1149052) Arcobacter nitrofigilis DSM 7299 9171342 YP_003655351.1 CDS Arnit_1185 NC_014166.1 1149061 1150311 R KEGG: hhe:HH1512 hypothetical protein; SPTR: B6BHF4 Putative uncharacterized protein; hypothetical protein complement(1149061..1150311) Arcobacter nitrofigilis DSM 7299 9171343 YP_003655352.1 CDS Arnit_1186 NC_014166.1 1150576 1152525 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR018771:IPR003018:IPR000160:IPR000014; KEGG: mmw:Mmwyl1_0187 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; Transcriptional regulator, histidine kinase sensor-like; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; SPTR: A6VRQ0 Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Predicted histidine kinase sensor domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS/PAC and GAF sensor-containg diguanylate cyclase 1150576..1152525 Arcobacter nitrofigilis DSM 7299 9171344 YP_003655353.1 CDS Arnit_1187 NC_014166.1 1152601 1154073 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: rhi:NGR_b12930 putative ABC-type sugar transport system, periplasmic component; PFAM: extracellular solute-binding protein family 1; SPTR: C3KRN6 Putative ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein; family 1 extracellular solute-binding protein 1152601..1154073 Arcobacter nitrofigilis DSM 7299 9171345 YP_003655354.1 CDS Arnit_1188 NC_014166.1 1154066 1155958 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013656:IPR003661:IPR003594:IPR009082:IPR 000014:IPR005467:IPR000700; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EV12 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase 1154066..1155958 Arcobacter nitrofigilis DSM 7299 9171346 YP_003655355.1 CDS Arnit_1189 NC_014166.1 1155968 1156717 D COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086:IPR020476:IPR020084:IPR015797; KEGG: abu:Abu_2020 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; SPTR: A8EWB4 MutT/nudix family protein; PFAM: NUDIX domain; NUDIX hydrolase 1155968..1156717 Arcobacter nitrofigilis DSM 7299 9171347 YP_003655356.1 CDS Arnit_1190 NC_014166.1 1156751 1158199 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016162:IPR016160:IPR016161; KEGG: cff:CFF8240_0070 aldehyde dehydrogenase A; PFAM: Aldehyde Dehydrogenase; SPTR: A0RM47 Aldehyde dehydrogenase A; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(1156751..1158199) Arcobacter nitrofigilis DSM 7299 9171348 YP_003655357.1 CDS Arnit_1191 NC_014166.1 1158392 1159342 D COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; InterPro IPR000534:IPR016040:IPR010136; KEGG: abu:Abu_0986 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: A8ETH2 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 1158392..1159342 Arcobacter nitrofigilis DSM 7299 9171349 YP_003655358.1 CDS Arnit_1192 NC_014166.1 1159343 1159951 D InterPro IPR014710:IPR018490; KEGG: fjo:Fjoh_4303 cyclic nucleotide-binding protein; SPTR: A5FBV6 Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; putative Crp/Fnr family transcriptional regulator 1159343..1159951 Arcobacter nitrofigilis DSM 7299 9171350 YP_003655359.1 CDS Arnit_1193 NC_014166.1 1159948 1160658 R InterPro IPR002790; KEGG: dat:HRM2_48560 hypothetical protein; PFAM: protein of unknown function DUF88; SPTR: C0QIG0 Putative uncharacterized protein; PFAM: Protein of unknown function DUF88; hypothetical protein complement(1159948..1160658) Arcobacter nitrofigilis DSM 7299 9171351 YP_003655360.1 CDS Arnit_1194 NC_014166.1 1160697 1161875 R COGs: COG0686 Alanine dehydrogenase; InterPro IPR007698:IPR016040; KEGG: ppr:PBPRB1416 hypothetical protein; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: Q6LHE7 Putative uncharacterized protein; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; alanine dehydrogenase/PNT domain-containing protein complement(1160697..1161875) Arcobacter nitrofigilis DSM 7299 9171352 YP_003655361.1 CDS Arnit_1195 NC_014166.1 1161903 1162466 R COGs: COG4843 conserved hypothetical protein; InterPro IPR019264; KEGG: sde:Sde_0566 hypothetical protein; PFAM: Protein of unknown function DUF2179; SPTR: Q21N99 UPF0316 protein Sde_0566; PFAM: Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein complement(1161903..1162466) Arcobacter nitrofigilis DSM 7299 9171353 YP_003655362.1 CDS Arnit_1196 NC_014166.1 1162744 1163706 R COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR016040; KEGG: mmw:Mmwyl1_1580 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: A6VVM9 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(1162744..1163706) Arcobacter nitrofigilis DSM 7299 9171354 YP_003655363.1 CDS Arnit_1197 NC_014166.1 1163831 1164712 D InterPro IPR000620; KEGG: abu:Abu_1045 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8ETN1 Conserved hypothetical membrane protein (DUF6 domain protein); PFAM: EamA-like transporter family; hypothetical protein 1163831..1164712 Arcobacter nitrofigilis DSM 7299 9171355 YP_003655364.1 CDS Arnit_1198 NC_014166.1 1164709 1165578 R COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: abu:Abu_1053 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A8ETN9 Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator complement(1164709..1165578) Arcobacter nitrofigilis DSM 7299 9171356 YP_003655365.1 CDS Arnit_1199 NC_014166.1 1165681 1166709 D COGs: COG2855 membrane protein; InterPro IPR018383:IPR004630; KEGG: abu:Abu_1054 putative integral membrane protein; PFAM: Uncharacterised protein family UPF0324; SPTR: A6DCS5 Putative uncharacterized protein; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 1165681..1166709 Arcobacter nitrofigilis DSM 7299 9171357 YP_003655366.1 CDS Arnit_1200 NC_014166.1 1166793 1168208 D COGs: COG1027 Aspartate ammonia-lyase; InterProIPR000362:IPR018951:IPR003031:IPR020557:IPR 008948:IPR004708; KEGG: abu:Abu_1581 aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; SPTR: A8EV56 Aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase; aspartate ammonia-lyase 1166793..1168208 Arcobacter nitrofigilis DSM 7299 9171358 YP_003655367.1 CDS Arnit_1201 NC_014166.1 1168205 1168696 D COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034; KEGG: abu:Abu_1580 putative asparaginase; SPTR: A8EV55 Putative uncharacterized protein; PFAM: Asparaginase; putative asparaginase 1168205..1168696 Arcobacter nitrofigilis DSM 7299 9171359 YP_003655368.1 CDS Arnit_1202 NC_014166.1 1168760 1171369 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR013655:IPR003661:IPR003594:IPR000014:IPR 001610:IPR004358:IPR009082:IPR005467:IPR000700; KEGG: abu:Abu_0455 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A8ES06 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase 1168760..1171369 Arcobacter nitrofigilis DSM 7299 9171360 YP_003655369.1 CDS Arnit_1203 NC_014166.1 1171386 1172096 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: cff:CFF8240_0377 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1ZZ91 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 1171386..1172096 Arcobacter nitrofigilis DSM 7299 9171361 YP_003655370.1 CDS Arnit_1204 NC_014166.1 1172194 1172733 D KEGG: tmz:Tmz1t_2865 hypothetical protein; SPTR: A3WKQ8 Putative uncharacterized protein; hypothetical protein 1172194..1172733 Arcobacter nitrofigilis DSM 7299 9171362 YP_003655371.1 CDS Arnit_1205 NC_014166.1 1173436 1173975 D InterPro IPR001647:IPR012287:IPR009057; KEGG: hch:HCH_02930 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A3Y5B8 Transcriptional Regulator, TetR family protein; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1173436..1173975 Arcobacter nitrofigilis DSM 7299 9171363 YP_003655372.1 CDS Arnit_1206 NC_014166.1 1174002 1174364 D KEGG: bbe:BBR47_45440 hypothetical protein; SPTR: A3YF82 Chaperonin GroEL; hypothetical protein 1174002..1174364 Arcobacter nitrofigilis DSM 7299 9171364 YP_003655373.1 CDS Arnit_1207 NC_014166.1 1174364 1175218 D KEGG: cts:Ctha_0969 hypothetical protein; SPTR: B3QXG0 Putative uncharacterized protein; hypothetical protein 1174364..1175218 Arcobacter nitrofigilis DSM 7299 9171365 YP_003655374.1 CDS Arnit_1208 NC_014166.1 1176008 1177021 D COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: dat:HRM2_16150 putative TRAP-type transporter, periplasmic component (TAXI family protein); SPTR: A6FA62 Immunogenic protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; TAXI family TRAP transporter solute receptor 1176008..1177021 Arcobacter nitrofigilis DSM 7299 9171366 YP_003655375.1 CDS Arnit_1209 NC_014166.1 1177112 1179067 D COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656:IPR018062:IPR011853; KEGG: mmw:Mmwyl1_3010 TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q2BHG2 Putative uncharacterized protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; TRAP transporter 4TM/12TM fusion protein 1177112..1179067 Arcobacter nitrofigilis DSM 7299 9171367 YP_003655376.1 CDS Arnit_1210 NC_014166.1 1179335 1181242 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_0790 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESY1 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 1179335..1181242 Arcobacter nitrofigilis DSM 7299 9171368 YP_003655377.1 CDS Arnit_1211 NC_014166.1 1181232 1181882 D InterPro IPR009501; KEGG: abu:Abu_1579 hypothetical protein; PFAM: protein of unknown function DUF1121; SPTR: A8EV54 Putative uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556; hypothetical protein 1181232..1181882 Arcobacter nitrofigilis DSM 7299 9171369 YP_003655378.1 CDS Arnit_1212 NC_014166.1 1181884 1183071 D COGs: COG0579 dehydrogenase; InterPro IPR006076; KEGG: hmo:HM1_1164 fad dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: B6BKG7 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase 1181884..1183071 Arcobacter nitrofigilis DSM 7299 9171370 YP_003655379.1 CDS Arnit_1213 NC_014166.1 1183091 1183651 R KEGG: tga:TGAM_0411 hypothetical protein; SPTR: C5A3V1 Putative uncharacterized protein; PFAM: Bacterial inner membrane protein; hypothetical protein complement(1183091..1183651) Arcobacter nitrofigilis DSM 7299 9171371 YP_003655380.1 CDS Arnit_1214 NC_014166.1 1183664 1184818 R COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933:IPR011650:IPR017439:IPR010168; KEGG: hna:Hneap_2199 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: Hippurate hydrolase; SPTR: Q1MYK3 Peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase complement(1183664..1184818) Arcobacter nitrofigilis DSM 7299 9171372 YP_003655381.1 CDS Arnit_1215 NC_014166.1 1184831 1185868 R COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: maq:Maqu_2141 proline racemase; PFAM: proline racemase; PRIAM: Proline racemase; SPTR: A3JC62 Putative proline racemase protein; PFAM: Proline racemase; proline racemase complement(1184831..1185868) Arcobacter nitrofigilis DSM 7299 9171373 YP_003655382.1 CDS Arnit_1216 NC_014166.1 1185861 1187018 R COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR002364:IPR013154:IPR013149:IPR011032:IPR 016040; KEGG: maq:Maqu_2142 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: A1U2K2 Alcohol dehydrogenase, zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(1185861..1187018) Arcobacter nitrofigilis DSM 7299 9171374 YP_003655383.1 CDS Arnit_1217 NC_014166.1 1187142 1187588 R COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016:IPR014729:IPR006015; KEGG: maq:Maqu_0351 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A6FPU3 Universal stress protein family protein; PFAM: Universal stress protein family; UspA domain-containing protein complement(1187142..1187588) Arcobacter nitrofigilis DSM 7299 9171375 YP_003655384.1 CDS Arnit_1218 NC_014166.1 1187599 1188882 R COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: sil:SPO1145 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A9DXM3 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(1187599..1188882) Arcobacter nitrofigilis DSM 7299 9171376 YP_003655385.1 CDS Arnit_1219 NC_014166.1 1188892 1189479 R COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: maq:Maqu_0353 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Q8VPB2 Small transmembrane protein; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ complement(1188892..1189479) Arcobacter nitrofigilis DSM 7299 9171377 YP_003655386.1 CDS Arnit_1220 NC_014166.1 1189541 1190554 R COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: maq:Maqu_0354 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A9DXL9 TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; family 7 extracellular solute-binding protein complement(1189541..1190554) Arcobacter nitrofigilis DSM 7299 9171378 YP_003655387.1 CDS Arnit_1221 NC_014166.1 1190641 1191825 R COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: csa:Csal_2732 peptidase M24; PFAM: creatinase; peptidase M24; SPTR: A4BIJ0 Peptidase, M24 family protein; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; TIGRFAM: ectoine utilization protein EutD; creatinase complement(1190641..1191825) Arcobacter nitrofigilis DSM 7299 9171379 YP_003655388.1 CDS Arnit_1222 NC_014166.1 1191835 1193229 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR015590:IPR016162:IPR016161; KEGG: bfa:Bfae_15470 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C7MCR9 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(1191835..1193229) Arcobacter nitrofigilis DSM 7299 9171380 YP_003655389.1 CDS Arnit_1223 NC_014166.1 1193239 1194483 R COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814:IPR015421:IPR015424; KEGG: hna:Hneap_2200 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III; SPTR: B5JS30 Diaminobutyrate--2-oxoglutarate transaminase; PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; class III aminotransferase complement(1193239..1194483) Arcobacter nitrofigilis DSM 7299 9171381 YP_003655390.1 CDS Arnit_1224 NC_014166.1 1194635 1194784 R hypothetical protein complement(1194635..1194784) Arcobacter nitrofigilis DSM 7299 9171382 YP_003655391.1 CDS Arnit_1225 NC_014166.1 1195080 1196264 D InterPro IPR011701:IPR016196; KEGG: slo:Shew_0674 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: B6R092 Permease, major facilitator superfamily; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1195080..1196264 Arcobacter nitrofigilis DSM 7299 9171383 YP_003655392.1 CDS Arnit_1226 NC_014166.1 1196261 1197343 R COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR000412; KEGG: abu:Abu_1366 ABC transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: A8EUJ8 ABC transporter, permease protein; PFAM: ABC-2 type transporter; ABC transporter complement(1196261..1197343) Arcobacter nitrofigilis DSM 7299 9171384 YP_003655393.1 CDS Arnit_1227 NC_014166.1 1197340 1198449 R COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR000412; KEGG: abu:Abu_1365 ABC transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: A8EUJ7 ABC transporter, permease protein; PFAM: ABC-2 type transporter; ABC transporter complement(1197340..1198449) Arcobacter nitrofigilis DSM 7299 9171385 YP_003655394.1 CDS Arnit_1228 NC_014166.1 1198439 1200136 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: abu:Abu_1364 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8EUJ6 ABC transporter, ATP-binding protein; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; ABC transporter-like protein complement(1198439..1200136) Arcobacter nitrofigilis DSM 7299 9171386 YP_003655395.1 CDS Arnit_1229 NC_014166.1 1200139 1201119 R COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: abu:Abu_1363 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: A8EUJ5 HlyD-family secretion protein; PFAM: HlyD family secretion protein; secretion protein HlyD family protein complement(1200139..1201119) Arcobacter nitrofigilis DSM 7299 9171387 YP_003655396.1 CDS Arnit_1230 NC_014166.1 1201222 1201734 R COGs: COG1528 Ferritin-like protein; InterPro IPR008331:IPR009040:IPR012347:IPR009078; KEGG: gbm:Gbem_2519 Ferritin Dps family protein; PFAM: Ferritin Dps family protein; PRIAM: Ferroxidase; SPTR: B7RZV2 Ferritin-like domain subfamily protein; PFAM: Ferritin-like domain; ferroxidase complement(1201222..1201734) Arcobacter nitrofigilis DSM 7299 9171388 YP_003655397.1 CDS Arnit_1231 NC_014166.1 1201842 1202762 D COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR001667:IPR004097; KEGG: abu:Abu_1578 putative manganese-dependent inorganic pyrophosphatase; PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; PRIAM: Inorganic diphosphatase; SPTR: A8EV53 Inorganic pyrophosphatase, manganese-dependent; PFAM: DHH family; DHHA2 domain; inorganic diphosphatase 1201842..1202762 Arcobacter nitrofigilis DSM 7299 9171389 YP_003655398.1 CDS Arnit_1232 NC_014166.1 1202821 1203588 D COGs: COG0730 permease; InterPro IPR002781; KEGG: vsa:VSAL_I1303 membrane protein; PFAM: protein of unknown function DUF81; SPTR: C5S2J5 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 1202821..1203588 Arcobacter nitrofigilis DSM 7299 9171390 YP_003655399.1 CDS Arnit_1233 NC_014166.1 1203588 1204361 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR018062:IPR000005:IPR012287:IPR 009057; KEGG: abu:Abu_1571 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EV46 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1203588..1204361 Arcobacter nitrofigilis DSM 7299 9171391 YP_003655400.1 CDS Arnit_1234 NC_014166.1 1204569 1205870 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034:IPR000891:IPR013785; KEGG: abu:Abu_1570 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; SPTR: A8EV45 2-isopropylmalate synthase; PFAM: HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type; pyruvate carboxyltransferase 1204569..1205870 Arcobacter nitrofigilis DSM 7299 9171392 YP_003655401.1 CDS Arnit_1235 NC_014166.1 1206513 1207274 R KEGG: fjo:Fjoh_3633 hypothetical protein; SPTR: A5FDR4 Putative uncharacterized protein; hypothetical protein complement(1206513..1207274) Arcobacter nitrofigilis DSM 7299 9171393 YP_003655402.1 CDS Arnit_1236 NC_014166.1 1207481 1207771 D COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: pdi:BDI_1404 hypothetical protein; PFAM: DNA polymerase beta domain protein region; SPTR: Q1PZ56 Putative uncharacterized protein; PFAM: Nucleotidyltransferase domain; DNA polymerase beta domain-containing protein 1207481..1207771 Arcobacter nitrofigilis DSM 7299 9171394 YP_003655403.1 CDS Arnit_1237 NC_014166.1 1207764 1208132 D COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: nis:NIS_0575 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: C2A3K3 Uncharacterized conserved protein; PFAM: Protein of unknown function DUF86; hypothetical protein 1207764..1208132 Arcobacter nitrofigilis DSM 7299 9171395 YP_003655404.1 CDS Arnit_1239 NC_014166.1 1208464 1209549 D COGs: COG4335 DNA alkylation repair protein; KEGG: abu:Abu_1559 putative DNA alkylation repair enzyme; SPTR: A8EV34 Putative DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; putative DNA alkylation repair enzyme 1208464..1209549 Arcobacter nitrofigilis DSM 7299 9171397 YP_003655405.1 CDS Arnit_1240 NC_014166.1 1209533 1210000 D COGs: COG2606 conserved hypothetical protein; InterPro IPR007214:IPR004369; KEGG: abu:Abu_1557 hypothetical protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: A8EV32 Conserved hypothetical membrane protein (DUF6); TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; ybaK/ebsC protein 1209533..1210000 Arcobacter nitrofigilis DSM 7299 9171398 YP_003655406.1 CDS Arnit_1241 NC_014166.1 1210062 1213256 D COGs: COG2902 NAD-specific glutamate dehydrogenase; InterPro IPR007780:IPR016040; KEGG: nam:NAMH_0845 NAD-glutamate dehydrogenase family protein; PFAM: NAD-glutamate dehydrogenase; SPTR: B6BK98 NAD-glutamate dehydrogenase; PFAM: Bacterial NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 1210062..1213256 Arcobacter nitrofigilis DSM 7299 9171399 YP_003655407.1 CDS Arnit_1242 NC_014166.1 1213324 1213536 D KEGG: rhoptry protein; SPTR: C4IE83 DNA mismatch repair protein MutS domain protein; hypothetical protein 1213324..1213536 Arcobacter nitrofigilis DSM 7299 9171400 YP_003655408.1 CDS Arnit_1243 NC_014166.1 1213556 1214830 D InterPro IPR020051:IPR000415; KEGG: nis:NIS_0039 hypothetical protein; SPTR: A6Q0Z8 Putative uncharacterized protein; TIGRFAM: SagB-type dehydrogenase domain; PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain; SagB-type dehydrogenase domain-containing protein 1213556..1214830 Arcobacter nitrofigilis DSM 7299 9171401 YP_003655409.1 CDS Arnit_1244 NC_014166.1 1214844 1215299 R COGs: COG2346 Truncated hemoglobins; InterPro IPR001486:IPR012292:IPR009050; KEGG: abu:Abu_1553 hypothetical protein; PFAM: globin; SPTR: A8EV28 Protozoan/cyanobacterial globin-like protein; PFAM: Bacterial-like globin; globin complement(1214844..1215299) Arcobacter nitrofigilis DSM 7299 9171402 YP_003655410.1 CDS Arnit_1245 NC_014166.1 1215398 1215916 D KEGG: dsh:Dshi_3592 Cna B domain-containing protein; SPTR: A6E355 Putative uncharacterized protein; hypothetical protein 1215398..1215916 Arcobacter nitrofigilis DSM 7299 9171403 YP_003655411.1 CDS Arnit_1246 NC_014166.1 1216003 1217985 D COGs: COG2200 FOG: EAL domain; InterProIPR001789:IPR001633:IPR013655:IPR000014:IPR 011006; KEGG: nam:NAMH_1510 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: EAL domain protein; response regulator receiver; SPTR: C2A3I3 PAS domain S-box protein; TIGRFAM: PAS sensor protein; PFAM: EAL domain; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; response regulator receiver modulated diguanylate phosphodiesterase 1216003..1217985 Arcobacter nitrofigilis DSM 7299 9171404 YP_003655412.1 CDS Arnit_1247 NC_014166.1 1217978 1219402 R COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040; KEGG: dps:DP2578 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B6BKY2 Oxidoreductase; PFAM: Protein of unknown function (DUF2867); NmrA-like family; NAD-dependent epimerase/dehydratase complement(1217978..1219402) Arcobacter nitrofigilis DSM 7299 9171405 YP_003655413.1 CDS Arnit_1248 NC_014166.1 1219575 1220147 D COGs: COG2995 Uncharacterized paraquat-inducible protein A; InterPro IPR007498; KEGG: aci:ACIAD2737 paraquat-inducible protein A (part 1); PFAM: Paraquat-inducible protein A; SPTR: C8NBJ7 Paraquat-inducible protein A; PFAM: Paraquat-inducible protein A; paraquat-inducible protein A 1219575..1220147 Arcobacter nitrofigilis DSM 7299 9171406 YP_003655414.1 CDS Arnit_1249 NC_014166.1 1220144 1220737 D COGs: COG2995 Uncharacterized paraquat-inducible protein A; InterPro IPR007498; KEGG: csa:Csal_2007 hypothetical protein; PFAM: Paraquat-inducible protein A; SPTR: C1SM75 Uncharacterized paraquat-inducible protein A; PFAM: Paraquat-inducible protein A; paraquat-inducible protein A 1220144..1220737 Arcobacter nitrofigilis DSM 7299 9171407 YP_003655415.1 CDS Arnit_1250 NC_014166.1 1220718 1223360 D COGs: COG3008 Paraquat-inducible protein B; InterPro IPR003399; KEGG: abu:Abu_1551 paraquat-inducible protein B; PFAM: Mammalian cell entry related domain protein; SPTR: A8EV27 Paraquat-inducible protein B; PFAM: mce related protein; mammalian cell entry related domain-containing protein 1220718..1223360 Arcobacter nitrofigilis DSM 7299 9171408 YP_003655416.1 CDS Arnit_1251 NC_014166.1 1223472 1224899 D COGs: COG0753 Catalase; InterProIPR002226:IPR018028:IPR010582:IPR011614:IPR 020835; KEGG: cff:CFF8240_1057 catalase; PFAM: Catalase related subgroup; Catalase domain protein; PRIAM: Catalase; SPTR: A0RPT7 Catalase; PFAM: Catalase; Catalase-related immune-responsive; catalase 1223472..1224899 Arcobacter nitrofigilis DSM 7299 9171409 YP_003655417.1 CDS Arnit_1252 NC_014166.1 1224901 1225383 D COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110:IPR020683; KEGG: abu:Abu_1550 ankyrin repeat-containing protein; PFAM: Ankyrin; SMART: Ankyrin; SPTR: A8EV26 Ankyrin repeat protein; PFAM: Ankyrin repeat; ankyrin 1224901..1225383 Arcobacter nitrofigilis DSM 7299 9171410 YP_003655418.1 CDS Arnit_1253 NC_014166.1 1225398 1227272 R KEGG: abu:Abu_1549 CiaB protein; SPTR: A8EV25 CiaB protein; CiaB protein complement(1225398..1227272) Arcobacter nitrofigilis DSM 7299 9171411 YP_003655419.1 CDS Arnit_1254 NC_014166.1 1227540 1230605 D InterPro IPR008638:IPR011050; KEGG: tdn:Suden_0748 filamentous haemagglutinin-like; PFAM: filamentous haemagglutinin domain protein; SPTR: Q30SK4 Filamentous haemagglutinin-like protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain; filamentous hemagglutinin family outer membrane protein 1227540..1230605 Arcobacter nitrofigilis DSM 7299 9171412 YP_003655420.1 CDS Arnit_1255 NC_014166.1 1230680 1231828 D COGs: COG4254 conserved hypothetical protein; KEGG: smt:Smal_2915 peptidoglycan-binding LysM; SPTR: Q2BKT2 LysM motif protein; PFAM: FecR protein; hypothetical protein 1230680..1231828 Arcobacter nitrofigilis DSM 7299 9171413 YP_003655421.1 CDS Arnit_1256 NC_014166.1 1231825 1233594 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR007890; KEGG: cyc:PCC7424_3092 diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE2 domain protein; SMART: GGDEF domain containing protein; SPTR: C6PRY3 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: CHASE2 domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; chase2 sensor-containing diguanylate cyclase 1231825..1233594 Arcobacter nitrofigilis DSM 7299 9171414 YP_003655422.1 CDS Arnit_1257 NC_014166.1 1233767 1235680 D COGs: COG0326 Molecular chaperone HSP90 family; InterProIPR003594:IPR020576:IPR001404:IPR020575:IPR 020568; KEGG: abu:Abu_1547 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV23 Chaperone protein htpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; Heat shock protein Hsp90 1233767..1235680 Arcobacter nitrofigilis DSM 7299 9171415 YP_003655423.1 CDS Arnit_1258 NC_014166.1 1235807 1236211 R KEGG: conserved hypothetical protein; SPTR: Q8I5C3 Conserved Plasmodium protein; hypothetical protein complement(1235807..1236211) Arcobacter nitrofigilis DSM 7299 9171416 YP_003655424.1 CDS Arnit_1259 NC_014166.1 1236300 1236596 D COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: gur:Gura_0409 DNA polymerase beta subunit; PFAM: DNA polymerase beta domain protein region; SPTR: A5GD96 DNA polymerase, beta domain protein region; PFAM: Nucleotidyltransferase domain; DNA polymerase beta domain-containing protein 1236300..1236596 Arcobacter nitrofigilis DSM 7299 9171417 YP_003655425.1 CDS Arnit_1260 NC_014166.1 1236589 1236927 D COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: cyc:PCC7424_5819 protein of unknown function DUF86; PFAM: protein of unknown function DUF86; SPTR: B7BGC8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF86; hypothetical protein 1236589..1236927 Arcobacter nitrofigilis DSM 7299 9171418 YP_003655426.1 CDS Arnit_1261 NC_014166.1 1237057 1237800 D InterPro IPR002781; KEGG: abu:Abu_2186 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: A8EWS7 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 1237057..1237800 Arcobacter nitrofigilis DSM 7299 9171419 YP_003655427.1 CDS Arnit_1262 NC_014166.1 1237802 1238623 D COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: abu:Abu_0849 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A8ET35 Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; LysR family transcriptional regulator 1237802..1238623 Arcobacter nitrofigilis DSM 7299 9171420 YP_003655428.1 CDS Arnit_1263 NC_014166.1 1238689 1239168 D InterPro IPR000182:IPR016181; KEGG: pin:Ping_2677 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: A1SY24 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 1238689..1239168 Arcobacter nitrofigilis DSM 7299 9171421 YP_003655429.1 CDS Arnit_1264 NC_014166.1 1239226 1241307 R COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010917:IPR012910:IPR000531:IPR010105; KEGG: abu:Abu_1575 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8EV50 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(1239226..1241307) Arcobacter nitrofigilis DSM 7299 9171422 YP_003655430.1 CDS Arnit_1265 NC_014166.1 1241438 1242418 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005:IPR009057; KEGG: abu:Abu_1574 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EV49 Transcriptional regulator, AraC family; AraC family transcriptional regulator 1241438..1242418 Arcobacter nitrofigilis DSM 7299 9171423 YP_003655431.1 CDS Arnit_1266 NC_014166.1 1242428 1243309 R InterPro IPR019613; KEGG: abu:Abu_2286 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: A8EX21 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region; nickel transport complex subunit NikM complement(1242428..1243309) Arcobacter nitrofigilis DSM 7299 9171424 YP_003655432.1 CDS Arnit_1267 NC_014166.1 1243418 1244293 R COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: mmb:Mmol_1661 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: C6WXB6 Secretion protein HlyD family protein; PFAM: HlyD family secretion protein; secretion protein HlyD family protein complement(1243418..1244293) Arcobacter nitrofigilis DSM 7299 9171425 YP_003655433.1 CDS Arnit_1268 NC_014166.1 1244302 1244502 R InterPro IPR012451; KEGG: rme:Rmet_4277 hypothetical protein; PFAM: protein of unknown function DUF1656; SPTR: Q1LFD3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1656); hypothetical protein complement(1244302..1244502) Arcobacter nitrofigilis DSM 7299 9171426 YP_003655434.1 CDS Arnit_1269 NC_014166.1 1244499 1246598 R COGs: COG1289 membrane protein; InterPro IPR006726; KEGG: mmb:Mmol_1663 fusaric acid resistance protein conserved region; PFAM: Fusaric acid resistance protein conserved region; SPTR: C6WXB8 Fusaric acid resistance protein conserved region; PFAM: Fusaric acid resistance protein family; fusaric acid resistance protein conserved region complement(1244499..1246598) Arcobacter nitrofigilis DSM 7299 9171427 YP_003655435.1 CDS Arnit_1270 NC_014166.1 1246579 1248012 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mei:Msip34_1079 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; SPTR: C6XCQ1 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; outer membrane efflux protein complement(1246579..1248012) Arcobacter nitrofigilis DSM 7299 9171428 YP_003655436.1 CDS Arnit_1271 NC_014166.1 1248017 1248445 R InterPro IPR000835:IPR011991; KEGG: dhd:Dhaf_1651 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: B8FPH2 Transcriptional regulator, MarR family; PFAM: MarR family; MarR family transcriptional regulator complement(1248017..1248445) Arcobacter nitrofigilis DSM 7299 9171429 YP_003655437.1 CDS Arnit_1272 NC_014166.1 1248649 1249599 D COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR015168:IPR011852; KEGG: mmw:Mmwyl1_1880 TRAP transporter solute receptor TAXI family protein; PFAM: NMT1/THI5 like domain protein; SPTR: B6R392 Trap-type transporter, periplasmic component, putative; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; TAXI family TRAP transporter solute receptor 1248649..1249599 Arcobacter nitrofigilis DSM 7299 9171430 YP_003655438.1 CDS Arnit_1273 NC_014166.1 1249599 1251398 D COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656:IPR011853; KEGG: mmw:Mmwyl1_1879 TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A6VWH4 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; TRAP transporter 4TM/12TM fusion protein 1249599..1251398 Arcobacter nitrofigilis DSM 7299 9171431 YP_003655439.1 CDS Arnit_1274 NC_014166.1 1251504 1252073 D KEGG: abu:Abu_1546 hypothetical protein; SPTR: A8EV22 Putative uncharacterized protein; hypothetical protein 1251504..1252073 Arcobacter nitrofigilis DSM 7299 9171432 YP_003655440.1 CDS Arnit_1275 NC_014166.1 1252110 1252724 D KEGG: abu:Abu_2095 hypothetical protein; SPTR: A8EWI9 Putative uncharacterized protein; hypothetical protein 1252110..1252724 Arcobacter nitrofigilis DSM 7299 9171433 YP_003655441.1 CDS Arnit_1276 NC_014166.1 1252882 1253313 D KEGG: pml:ATP_00081 DNA polymerase III alpha subunit; SPTR: B3R0A4 DNA polymerase III alpha subunit; hypothetical protein 1252882..1253313 Arcobacter nitrofigilis DSM 7299 9171434 YP_003655442.1 CDS Arnit_1277 NC_014166.1 1253351 1254520 R COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterProIPR001967:IPR012907:IPR018044:IPR012338:IPR 015956; KEGG: noc:Noc_2632 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; PRIAM: Beta-lactamase; SPTR: C0N758 Beta-lactamase, putative; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; beta-lactamase complement(1253351..1254520) Arcobacter nitrofigilis DSM 7299 9171435 YP_003655443.1 CDS Arnit_1278 NC_014166.1 1254635 1255264 R COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: tdn:Suden_0709 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q30SP3 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2; hypothetical protein complement(1254635..1255264) Arcobacter nitrofigilis DSM 7299 9171436 YP_003655444.1 CDS Arnit_1279 NC_014166.1 1255369 1256106 D COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: nam:NAMH_0122 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: C1ZZI7 Uncharacterized lactam utilization protein B-like protein; PFAM: LamB/YcsF family; LamB/YcsF family protein 1255369..1256106 Arcobacter nitrofigilis DSM 7299 9171437 YP_003655445.1 CDS Arnit_1280 NC_014166.1 1256182 1256382 D SPTR: C9LEN9 MarC family integral membrane protein; hypothetical protein 1256182..1256382 Arcobacter nitrofigilis DSM 7299 9171438 YP_003655446.1 CDS Arnit_1281 NC_014166.1 1256462 1257982 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR013163:IPR005467:IPR004358; KEGG: abu:Abu_0362 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERR3 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 1256462..1257982 Arcobacter nitrofigilis DSM 7299 9171439 YP_003655447.1 CDS Arnit_1282 NC_014166.1 1257985 1258665 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011991:IPR011006; KEGG: abu:Abu_1582 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EV57 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator receiver protein 1257985..1258665 Arcobacter nitrofigilis DSM 7299 9171440 YP_003655448.1 CDS Arnit_1283 NC_014166.1 1258737 1259693 D COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: nam:NAMH_0119 putative secreted protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: B9L7E8 Putative secreted protein; PFAM: Bacterial extracellular solute-binding protein, family 7; family 7 extracellular solute-binding protein 1258737..1259693 Arcobacter nitrofigilis DSM 7299 9171441 YP_003655449.1 CDS Arnit_1284 NC_014166.1 1259697 1260182 D COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: nam:NAMH_0120 hypothetical protein; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: A6DD07 TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ 1259697..1260182 Arcobacter nitrofigilis DSM 7299 9171442 YP_003655450.1 CDS Arnit_1285 NC_014166.1 1260172 1261509 D COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: nam:NAMH_0121 trap dicarboxylate family transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A6DD06 DctM (C4-dicarboxylate permease, large subunit); TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 1260172..1261509 Arcobacter nitrofigilis DSM 7299 9171443 YP_003655451.1 CDS Arnit_1286 NC_014166.1 1261625 1262656 D COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dsh:Dshi_3153 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A3JF20 TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; family 7 extracellular solute-binding protein 1261625..1262656 Arcobacter nitrofigilis DSM 7299 9171444 YP_003655452.1 CDS Arnit_1287 NC_014166.1 1262668 1263204 D COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: swd:Swoo_1734 hypothetical protein; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: B1KNE2 Putative uncharacterized protein; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ 1262668..1263204 Arcobacter nitrofigilis DSM 7299 9171445 YP_003655453.1 CDS Arnit_1288 NC_014166.1 1263185 1264471 D COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: swd:Swoo_1735 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A3JF18 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 1263185..1264471 Arcobacter nitrofigilis DSM 7299 9171446 YP_003655454.1 CDS Arnit_1289 NC_014166.1 1264480 1265283 D COGs: COG0388 amidohydrolase; InterPro IPR001110:IPR003010; KEGG: bbe:BBR47_08120 hypothetical protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Q1PXD4 Similar to N-carbamoyl-D-amino acid hydrolase; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase 1264480..1265283 Arcobacter nitrofigilis DSM 7299 9171447 YP_003655455.1 CDS Arnit_1290 NC_014166.1 1265292 1265951 D COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: gdj:Gdia_2262 dimethylmenaquinone methyltransferase; PFAM: Dimethylmenaquinone methyltransferase; SPTR: A9H2C7 Putative demethylmenaquinone methyltransferase protein; PFAM: Demethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 1265292..1265951 Arcobacter nitrofigilis DSM 7299 9171448 YP_003655456.1 CDS Arnit_1291 NC_014166.1 1265948 1266715 D COGs: COG4336 conserved hypothetical protein; InterPro IPR009906; KEGG: cbe:Cbei_2760 hypothetical protein; PFAM: protein of unknown function DUF1445; SPTR: C1ZXZ8 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF1445); hypothetical protein 1265948..1266715 Arcobacter nitrofigilis DSM 7299 9171449 YP_003655457.1 CDS Arnit_1292 NC_014166.1 1266718 1267398 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011991:IPR011006; KEGG: abu:Abu_1582 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EV57 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator receiver protein complement(1266718..1267398) Arcobacter nitrofigilis DSM 7299 9171450 YP_003655458.1 CDS Arnit_1293 NC_014166.1 1267408 1269234 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR002464:IPR013163:IPR005467:IPR 004358; KEGG: abu:Abu_1583 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV58 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(1267408..1269234) Arcobacter nitrofigilis DSM 7299 9171451 YP_003655459.1 CDS Arnit_1294 NC_014166.1 1269396 1270133 D COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: nam:NAMH_0122 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: A6DD05 Putative uncharacterized protein; PFAM: LamB/YcsF family; LamB/YcsF family protein 1269396..1270133 Arcobacter nitrofigilis DSM 7299 9171452 YP_003655460.1 CDS Arnit_1295 NC_014166.1 1270130 1270804 D COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833:IPR010016; KEGG: swd:Swoo_1737 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: C1ZZI8 Putative uncharacterized protein; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370; allophanate hydrolase subunit 1 1270130..1270804 Arcobacter nitrofigilis DSM 7299 9171453 YP_003655461.1 CDS Arnit_1296 NC_014166.1 1270801 1271712 D COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: cps:CPS_1985 allophanate hydrolase domain-containing protein; PFAM: Allophanate hydrolase subunit 2; PRIAM: Urea carboxylase; SMART: Allophanate hydrolase subunit 2; SPTR: C1ZZI9 Biotin-dependent carboxylase-like protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; urea amidolyase-like protein 1270801..1271712 Arcobacter nitrofigilis DSM 7299 9171454 YP_003655462.1 CDS Arnit_1297 NC_014166.1 1271746 1272276 D COGs: COG0586 membrane-associated protein; KEGG: abu:Abu_1544 hypothetical protein; SPTR: A8EV20 Conserved hypothetical integral membrane protein; PFAM: SNARE associated Golgi protein; hypothetical protein 1271746..1272276 Arcobacter nitrofigilis DSM 7299 9171455 YP_003655463.1 CDS Arnit_1298 NC_014166.1 1272277 1273635 D COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014001:IPR001650:IPR000629:IPR011545:IPR 005580:IPR014021:IPR014014; KEGG: abu:Abu_1543 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8EV19 ATP-dependent RNA helicase DbpA; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase 1272277..1273635 Arcobacter nitrofigilis DSM 7299 9171456 YP_003655464.1 CDS Arnit_1299 NC_014166.1 1273705 1274673 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_1300 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8EUD3 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1273705..1274673 Arcobacter nitrofigilis DSM 7299 9171457 YP_003655465.1 CDS Arnit_1300 NC_014166.1 1274686 1274973 D COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: tgr:Tgr7_2543 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: B8GM32 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase 1274686..1274973 Arcobacter nitrofigilis DSM 7299 9171458 YP_003655466.1 CDS Arnit_1301 NC_014166.1 1274991 1275794 R InterPro IPR005821; KEGG: abu:Abu_1752 ion transport protein; PFAM: Ion transport protein; SPTR: A8EVM5 Ion transport protein; PFAM: Ion transport protein; Ion transport protein complement(1274991..1275794) Arcobacter nitrofigilis DSM 7299 9171459 YP_003655467.1 CDS Arnit_1302 NC_014166.1 1275866 1277482 R COGs: COG1078 HD superfamily phosphohydrolase; KEGG: abu:Abu_1539 hypothetical protein; SPTR: A8EV15 Putative uncharacterized protein; PFAM: HD domain; hypothetical protein complement(1275866..1277482) Arcobacter nitrofigilis DSM 7299 9171460 YP_003655468.1 CDS Arnit_1303 NC_014166.1 1277694 1277810 D KEGG: dsa:Desal_0777 hypothetical protein; SPTR: C2HFJ3 Putative uncharacterized protein; hypothetical protein 1277694..1277810 Arcobacter nitrofigilis DSM 7299 9171461 YP_003655469.1 CDS Arnit_1304 NC_014166.1 1277832 1279208 R COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714; KEGG: abu:Abu_1538 PhoH family protein; PFAM: PhoH family protein; SPTR: A8EV14 PhoH family protein; PFAM: PhoH-like protein; PhoH family protein complement(1277832..1279208) Arcobacter nitrofigilis DSM 7299 9171462 YP_003655470.1 CDS Arnit_1305 NC_014166.1 1279373 1279855 R COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: abu:Abu_0364 S-adenosylmethionine:2-demethylmenaquinone methyltransferase; PFAM: Dimethylmenaquinone methyltransferase; SPTR: A8ERR5 S-adenosylmethionine:2-demethylmenaquinone methyltransferase; PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy; dimethylmenaquinone methyltransferase complement(1279373..1279855) Arcobacter nitrofigilis DSM 7299 9171463 YP_003655471.1 CDS Arnit_1306 NC_014166.1 1280104 1280322 R COGs: COG1278 Cold shock protein; InterProIPR011129:IPR019844:IPR002059:IPR012156:IPR 012340:IPR016027; KEGG: tdn:Suden_1504 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B6BNR1 'Cold-shock' DNA-binding domain, putative; PFAM: 'Cold-shock' DNA-binding domain; cold-shock DNA-binding domain-containing protein complement(1280104..1280322) Arcobacter nitrofigilis DSM 7299 9171464 YP_003655472.1 CDS Arnit_1307 NC_014166.1 1280528 1280710 R hypothetical protein complement(1280528..1280710) Arcobacter nitrofigilis DSM 7299 9171465 YP_003655473.1 CDS Arnit_1308 NC_014166.1 1280707 1281378 R InterPro IPR013216; KEGG: dba:Dbac_0907 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: C7LPH9 Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase complement(1280707..1281378) Arcobacter nitrofigilis DSM 7299 9171466 YP_003655474.1 CDS Arnit_1309 NC_014166.1 1281504 1282145 D COGs: COG1651 Protein-disulfide isomerase; InterPro IPR017936:IPR012335:IPR012336; KEGG: rfr:Rfer_0414 DsbA oxidoreductase; SPTR: Q221Y5 DSBA oxidoreductase; DsbA oxidoreductase 1281504..1282145 Arcobacter nitrofigilis DSM 7299 9171467 YP_003655475.1 CDS Arnit_1310 NC_014166.1 1282166 1282759 R COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: mba:Mbar_A0710 hypothetical protein; PFAM: pentapeptide repeat protein; SPTR: A0YKR1 Putative uncharacterized protein; PFAM: Pentapeptide repeats (8 copies); pentapeptide repeat-containing protein complement(1282166..1282759) Arcobacter nitrofigilis DSM 7299 9171468 YP_003655476.1 CDS Arnit_1311 NC_014166.1 1282756 1283142 R InterPro IPR012335:IPR012336; KEGG: sun:SUN_0692 hypothetical protein; SPTR: A6Q842 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255; hypothetical protein complement(1282756..1283142) Arcobacter nitrofigilis DSM 7299 9171469 YP_003655477.1 CDS Arnit_1312 NC_014166.1 1283269 1283553 D COGs: COG1359 conserved hypothetical protein; InterPro IPR007138:IPR011008; KEGG: tdn:Suden_1481 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q30QH3 Antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1283269..1283553 Arcobacter nitrofigilis DSM 7299 9171470 YP_003655478.1 CDS Arnit_1313 NC_014166.1 1283563 1284735 D COGs: COG3347 conserved hypothetical protein; InterPro IPR001303; KEGG: sun:SUN_0120 oxidoreductase; PFAM: class II aldolase/adducin family protein; SPTR: A6Q6H1 Oxidoreductase; PFAM: Class II Aldolase and Adducin N-terminal domain; class II aldolase/adducin family protein 1283563..1284735 Arcobacter nitrofigilis DSM 7299 9171471 YP_003655479.1 CDS Arnit_1314 NC_014166.1 1284756 1285562 R COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129:IPR017946; KEGG: tdn:Suden_1231 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: Q30R72 Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase complement(1284756..1285562) Arcobacter nitrofigilis DSM 7299 9171472 YP_003655480.1 CDS Arnit_1315 NC_014166.1 1285563 1286420 R COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: dsa:Desal_3306 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C6BRX3 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(1285563..1286420) Arcobacter nitrofigilis DSM 7299 9171473 YP_003655481.1 CDS Arnit_1316 NC_014166.1 1286417 1287274 R COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I; InterPro IPR000515; KEGG: dat:HRM2_45430 PotB1; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0QG20 PotB1; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(1286417..1287274) Arcobacter nitrofigilis DSM 7299 9171474 YP_003655482.1 CDS Arnit_1317 NC_014166.1 1287271 1287465 R KEGG: dat:HRM2_45440 PotA1; SPTR: C0QG21 PotA1; PotA1 protein complement(1287271..1287465) Arcobacter nitrofigilis DSM 7299 9171475 YP_003655483.1 CDS Arnit_1318 NC_014166.1 1287452 1288339 R COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR017871:IPR003439; KEGG: dsa:Desal_3308 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6BRX5 ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein complement(1287452..1288339) Arcobacter nitrofigilis DSM 7299 9171476 YP_003655484.1 CDS Arnit_1319 NC_014166.1 1288382 1289443 R COGs: COG0687 Spermidine/putrescine-binding periplasmic protein; InterPro IPR006059:IPR001188; KEGG: dat:HRM2_45450 PotD; PFAM: extracellular solute-binding protein family 1; SPTR: C0QG22 PotD; PFAM: Bacterial extracellular solute-binding protein; family 1 extracellular solute-binding protein complement(1288382..1289443) Arcobacter nitrofigilis DSM 7299 9171477 YP_003655485.1 CDS Arnit_1320 NC_014166.1 1289677 1291239 D COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: tdn:Suden_1477 autoinducer-2 (AI-2) kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Q30QH7 Carbohydrate kinase, FGGY; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; carbohydrate kinase 1289677..1291239 Arcobacter nitrofigilis DSM 7299 9171478 YP_003655486.1 CDS Arnit_1321 NC_014166.1 1291240 1291614 D InterPro IPR013096:IPR014710:IPR011051; KEGG: swd:Swoo_3746 cupin 2 domain-containing protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: B1KE03 Cupin 2 conserved barrel domain protein; PFAM: Cupin domain; cupin 1291240..1291614 Arcobacter nitrofigilis DSM 7299 9171479 YP_003655487.1 CDS Arnit_1322 NC_014166.1 1291616 1292386 D InterPro IPR005821:IPR003091; KEGG: det:DET0408 cation channel family protein; PFAM: Ion transport protein; SPTR: A8CTL0 Ion transport protein; PFAM: Ion transport protein; Ion transport protein 1291616..1292386 Arcobacter nitrofigilis DSM 7299 9171480 YP_003655488.1 CDS Arnit_1323 NC_014166.1 1292395 1293384 D KEGG: hypothetical protein; SPTR: B3L5T4 Putative uncharacterized protein; hypothetical protein 1292395..1293384 Arcobacter nitrofigilis DSM 7299 9171481 YP_003655489.1 CDS Arnit_1324 NC_014166.1 1293393 1293872 R COGs: COG0748 Putative heme iron utilization protein; InterPro IPR012349:IPR009002; KEGG: ava:Ava_2287 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; SPTR: B4WRR2 Pyridoxamine 5'-phosphate oxidase family protein; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like protein complement(1293393..1293872) Arcobacter nitrofigilis DSM 7299 9171482 YP_003655490.1 CDS Arnit_1325 NC_014166.1 1293960 1294898 D KEGG: sun:SUN_1166 hypothetical protein; SPTR: A6Q9G2 Putative uncharacterized protein; hypothetical protein 1293960..1294898 Arcobacter nitrofigilis DSM 7299 9171483 YP_003655491.1 CDS Arnit_1326 NC_014166.1 1294900 1295880 D COGs: COG2951 Membrane-bound lytic murein transglycosylase B; KEGG: sun:SUN_0481 membrane-bound lytic murein transglycosylase; SPTR: A6Q7I2 Membrane-bound lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase B; membrane-bound lytic murein transglycosylase 1294900..1295880 Arcobacter nitrofigilis DSM 7299 9171484 YP_003655492.1 CDS Arnit_1327 NC_014166.1 1295877 1296938 R KEGG: sun:SUN_0843 hypothetical protein; SPTR: A6Q8J2 Putative uncharacterized protein; hypothetical protein complement(1295877..1296938) Arcobacter nitrofigilis DSM 7299 9171485 YP_003655493.1 CDS Arnit_1328 NC_014166.1 1297011 1297571 R InterProIPR017937:IPR013740:IPR017936:IPR012335:IPR 012336; KEGG: abu:Abu_1448 putative lipoprotein thiredoxin; PFAM: Redoxin domain protein; SPTR: A8EUS9 Putative lipoprotein thiredoxin; PFAM: Redoxin; redoxin domain-containing protein complement(1297011..1297571) Arcobacter nitrofigilis DSM 7299 9171486 YP_003655494.1 CDS Arnit_1329 NC_014166.1 1297571 1297990 R InterPro IPR003752:IPR012187; KEGG: abu:Abu_1450 DsbB family disulfide bond formation protein; PFAM: Disulphide bond formation protein DsbB; SPTR: A8EUT1 Disulfide bond formation protein, DsbB family; PFAM: Disulfide bond formation protein DsbB; Disulfide bond formation protein DsbB complement(1297571..1297990) Arcobacter nitrofigilis DSM 7299 9171487 YP_003655495.1 CDS Arnit_1330 NC_014166.1 1298080 1298379 D KEGG: efa:EF2616 SsrA-binding protein; SPTR: B6BKA5 Putative uncharacterized protein; hypothetical protein 1298080..1298379 Arcobacter nitrofigilis DSM 7299 9171488 YP_003655496.1 CDS Arnit_1331 NC_014166.1 1298401 1300539 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003594:IPR003661:IPR005467:IPR000014:IPR 004358:IPR009082; KEGG: abu:Abu_0102 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ER13 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase 1298401..1300539 Arcobacter nitrofigilis DSM 7299 9171489 YP_003655497.1 CDS Arnit_1332 NC_014166.1 1300531 1302306 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003593:IPR017871:IPR001140:IPR003439:IPR 017940:IPR011527; KEGG: tdn:Suden_0069 ABC transporter-related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Q30UI1 ABC transporter-related protein; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter-like protein complement(1300531..1302306) Arcobacter nitrofigilis DSM 7299 9171490 YP_003655498.1 CDS Arnit_1333 NC_014166.1 1302411 1302857 D KEGG: maa:MAG_1370 valyl-tRNA synthetase; SPTR: A5IXS6 Valyl-tRNA synthetase (Valine-tRNA ligase)(VALRS); hypothetical protein 1302411..1302857 Arcobacter nitrofigilis DSM 7299 9171491 YP_003655499.1 CDS Arnit_1334 NC_014166.1 1302854 1303483 R COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834:IPR006402; KEGG: abu:Abu_1447 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8EUS8 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase complement(1302854..1303483) Arcobacter nitrofigilis DSM 7299 9171492 YP_003655500.1 CDS Arnit_1335 NC_014166.1 1303461 1303880 R KEGG: pmx:PERMA_1654 hypothetical protein; SPTR: C0QRX4 Putative uncharacterized protein; hypothetical protein complement(1303461..1303880) Arcobacter nitrofigilis DSM 7299 9171493 YP_003655501.1 CDS Arnit_1336 NC_014166.1 1303927 1304673 R KEGG: abu:Abu_1531 hypothetical protein; SPTR: A8EV11 Putative uncharacterized protein; hypothetical protein complement(1303927..1304673) Arcobacter nitrofigilis DSM 7299 9171494 YP_003655502.1 CDS Arnit_1337 NC_014166.1 1304792 1305727 R COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: tdn:Suden_0442 peptidase M23B; PFAM: Peptidase M23; SPTR: B6BMB6 Peptidase M23B; PFAM: Peptidase family M23; peptidase M23 complement(1304792..1305727) Arcobacter nitrofigilis DSM 7299 9171495 YP_003655503.1 CDS Arnit_1338 NC_014166.1 1305733 1305927 R KEGG: sus:Acid_0010 hypothetical protein; SPTR: A3XQQ2 Putative uncharacterized protein; hypothetical protein complement(1305733..1305927) Arcobacter nitrofigilis DSM 7299 9171496 YP_003655504.1 CDS Arnit_1339 NC_014166.1 1306014 1306724 D COGs: COG0217 conserved hypothetical protein; InterPro IPR002876:IPR017856; KEGG: abu:Abu_1442 hypothetical protein; PFAM: protein of unknown function DUF28; SPTR: A8EUS3 Putative uncharacterized protein; PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033; hypothetical protein 1306014..1306724 Arcobacter nitrofigilis DSM 7299 9171497 YP_003655505.1 CDS Arnit_1340 NC_014166.1 1306743 1307285 D COGs: COG1225 Peroxiredoxin; InterPro IPR000866:IPR017936:IPR012335:IPR012336; KEGG: bid:Bind_1843 redoxin domain-containing protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A0YKJ1 BcpB; PFAM: Redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1306743..1307285 Arcobacter nitrofigilis DSM 7299 9171498 YP_003655506.1 CDS Arnit_1341 NC_014166.1 1307339 1308094 R COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: wsu:WS1322 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: C5ZX64 Putative uncharacterized protein; PFAM: Peptidase family M48; peptidase M48 Ste24p complement(1307339..1308094) Arcobacter nitrofigilis DSM 7299 9171499 YP_003655507.1 CDS Arnit_1342 NC_014166.1 1308191 1308886 R KEGG: cha:CHAB381_1592 hypothetical protein; SPTR: A7I3M5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3108); hypothetical protein complement(1308191..1308886) Arcobacter nitrofigilis DSM 7299 9171500 YP_003655508.1 CDS Arnit_1343 NC_014166.1 1308959 1309849 D COGs: COG2962 permease; InterPro IPR000620; KEGG: sme:SMc00706 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8TNP7 Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 1308959..1309849 Arcobacter nitrofigilis DSM 7299 9171501 YP_003655509.1 CDS Arnit_1344 NC_014166.1 1309839 1310282 R InterPro IPR012660; KEGG: abu:Abu_1440 thioesterase/acetyltransferase, putative; PFAM: Thioesterase putative; SPTR: A8EUS1 Thioesterase/acetyltransferase, putative; PFAM: Putative thioesterase (yiiD_Cterm); TIGRFAM: thioesterase domain, putative; thioesterase complement(1309839..1310282) Arcobacter nitrofigilis DSM 7299 9171502 YP_003655510.1 CDS Arnit_1345 NC_014166.1 1310273 1312402 R COGs: COG1647 Esterase/lipase; InterPro IPR002123:IPR003140; KEGG: dol:Dole_1932 esterase/lipase-like protein; PFAM: phospholipid/glycerol acyltransferase; phospholipase/Carboxylesterase; SPTR: B6BLQ2 Acyltransferase domain protein; PFAM: Acyltransferase; Prolyl oligopeptidase family; Phospholipase/Carboxylesterase; phospholipid/glycerol acyltransferase complement(1310273..1312402) Arcobacter nitrofigilis DSM 7299 9171503 YP_003655511.1 CDS Arnit_1346 NC_014166.1 1312407 1314767 R COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006089:IPR006092:IPR006091:IPR006090:IPR 015396:IPR013786:IPR013764:IPR009100:IPR009075; KEGG: rmr:Rmar_1705 protein of unknown function DUF1974; PFAM: Protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; SPTR: C1ZPX1 Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain; hypothetical protein complement(1312407..1314767) Arcobacter nitrofigilis DSM 7299 9171504 YP_003655512.1 CDS Arnit_1347 NC_014166.1 1314755 1316875 R COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR006180:IPR001753:IPR006176:IPR006108:IPR 016040:IPR013328:IPR008927; KEGG: pin:Ping_2604 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: B6BLQ4 Fatty acid oxidation complex alpha subunit; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; enoyl-CoA hydratase/isomerase complement(1314755..1316875) Arcobacter nitrofigilis DSM 7299 9171505 YP_003655513.1 CDS Arnit_1348 NC_014166.1 1316877 1318148 R COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: pin:Ping_2605 acetyl-CoA acetyltransferases; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: B6BLQ5 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; acetyl-CoA acetyltransferase complement(1316877..1318148) Arcobacter nitrofigilis DSM 7299 9171506 YP_003655514.1 CDS Arnit_1349 NC_014166.1 1318158 1319879 R COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: pin:Ping_2606 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A1SXW0 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; AMP-dependent synthetase and ligase complement(1318158..1319879) Arcobacter nitrofigilis DSM 7299 9171507 YP_003655515.1 CDS Arnit_1350 NC_014166.1 1320266 1322842 D COGs: COG1049 Aconitase B; InterProIPR018136:IPR015929:IPR001030:IPR004406:IPR 015933:IPR015928:IPR015931:IPR015932; KEGG: abu:Abu_1439 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; PFAM: Aconitase B; aconitate hydratase domain protein; SPTR: A8EUS0 Aconitate hydratase 2; TIGRFAM: aconitate hydratase 2; PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; aconitate hydratase 2 1320266..1322842 Arcobacter nitrofigilis DSM 7299 9171508 YP_003655516.1 CDS Arnit_1351 NC_014166.1 1322862 1323644 R COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR005834:IPR006357; KEGG: fnu:FN1255 NagD protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q8RE68 NagD protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily hydrolase complement(1322862..1323644) Arcobacter nitrofigilis DSM 7299 9171509 YP_003655517.1 CDS Arnit_1352 NC_014166.1 1323644 1324441 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sit:TM1040_3214 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q1GMC8 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(1323644..1324441) Arcobacter nitrofigilis DSM 7299 9171510 YP_003655518.1 CDS Arnit_1353 NC_014166.1 1324447 1325310 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bpt:Bpet0073 glycerol-3-phosphat transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A9HVY4 Glycerol-3-phosphat transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(1324447..1325310) Arcobacter nitrofigilis DSM 7299 9171511 YP_003655519.1 CDS Arnit_1354 NC_014166.1 1325319 1326587 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: rde:RD1_3571 glycerol-3-phosphate ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: B6AZA8 Glycerol-3-phosphate ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding protein; family 1 extracellular solute-binding protein complement(1325319..1326587) Arcobacter nitrofigilis DSM 7299 9171512 YP_003655520.1 CDS Arnit_1355 NC_014166.1 1326615 1327688 R COGs: COG3839 ABC-type sugar transport systems ATPase components; InterProIPR003593:IPR017871:IPR003439:IPR013611:IPR 008995; KEGG: dvm:DvMF_0655 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: B6R2E8 Sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter; TOBE domain; ABC transporter-like protein complement(1326615..1327688) Arcobacter nitrofigilis DSM 7299 9171513 YP_003655521.1 CDS Arnit_1356 NC_014166.1 1327701 1328465 R COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: dat:HRM2_41360 GlpR1; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: A0NN46 Transcriptional regulator, DeoR family protein; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; DeoR family transcriptional regulator complement(1327701..1328465) Arcobacter nitrofigilis DSM 7299 9171514 YP_003655522.1 CDS Arnit_1357 NC_014166.1 1328668 1329264 D InterPro IPR001647:IPR012287:IPR009057; KEGG: abu:Abu_1438 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8EUR9 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1328668..1329264 Arcobacter nitrofigilis DSM 7299 9171515 YP_003655523.1 CDS Arnit_1358 NC_014166.1 1329248 1330183 D COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137; KEGG: abu:Abu_1437 Ni/Fe-dependent hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: A8EUR8 Ni/Fe-dependent hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); NADH ubiquinone oxidoreductase 20 kDa subunit 1329248..1330183 Arcobacter nitrofigilis DSM 7299 9171516 YP_003655524.1 CDS Arnit_1359 NC_014166.1 1330170 1331522 D COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: abu:Abu_1436 Ni/Fe-dependent hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: A8EUR7 Ni/Fe-dependent hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase; nickel-dependent hydrogenase large subunit 1330170..1331522 Arcobacter nitrofigilis DSM 7299 9171517 YP_003655525.1 CDS Arnit_1360 NC_014166.1 1331804 1333051 D COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137:IPR001821:IPR017909:IPR006311; KEGG: abu:Abu_1435 Ni/Fe-hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: Hydrogen:quinone oxidoreductase; SPTR: A8EUR6 Ni/Fe-hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA); hydrogenase (NiFe) small subunit HydA 1331804..1333051 Arcobacter nitrofigilis DSM 7299 9171518 YP_003655526.1 CDS Arnit_1361 NC_014166.1 1333051 1334787 D COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: abu:Abu_1434 Ni/Fe-hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: A8EUR5 Ni/Fe-hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase; nickel-dependent hydrogenase large subunit 1333051..1334787 Arcobacter nitrofigilis DSM 7299 9171519 YP_003655527.1 CDS Arnit_1362 NC_014166.1 1334780 1335499 D COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR011577:IPR000516:IPR016174; KEGG: abu:Abu_1433 Ni/Fe hydrogenase, cytochrome b subunit; PFAM: cytochrome B561; SPTR: A8EUR4 Ni/Fe hydrogenase, cytochrome b subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 1334780..1335499 Arcobacter nitrofigilis DSM 7299 9171520 YP_003655528.1 CDS Arnit_1363 NC_014166.1 1335604 1336179 D COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: abu:Abu_1432 Ni/Fe hydrogenase, expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; SPTR: A8EUR3 Ni/Fe hydrogenase, expression/formation protein; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; hydrogenase maturation protease 1335604..1336179 Arcobacter nitrofigilis DSM 7299 9171521 YP_003655529.1 CDS Arnit_1364 NC_014166.1 1336176 1337720 D KEGG: abu:Abu_1431 hypothetical protein; SPTR: A8EUR2 Putative uncharacterized protein; hypothetical protein 1336176..1337720 Arcobacter nitrofigilis DSM 7299 9171522 YP_003655530.1 CDS Arnit_1365 NC_014166.1 1338047 1339213 D COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterProIPR019546:IPR006137:IPR001821:IPR017909:IPR 006311; KEGG: abu:Abu_1428 Ni/Fe-hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Twin-arginine translocation pathway, signal sequence, subgroup; PRIAM: Hydrogen:quinone oxidoreductase; SPTR: A8EUQ9 Ni/Fe-hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit HydA 1338047..1339213 Arcobacter nitrofigilis DSM 7299 9171523 YP_003655531.1 CDS Arnit_1366 NC_014166.1 1339213 1340943 D COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: abu:Abu_1427 Ni/Fe-hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: A8EUQ8 Ni/Fe-hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase; nickel-dependent hydrogenase large subunit 1339213..1340943 Arcobacter nitrofigilis DSM 7299 9171524 YP_003655532.1 CDS Arnit_1367 NC_014166.1 1340956 1341645 D COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR000516:IPR011577:IPR016174; KEGG: abu:Abu_1426 Ni/Fe hydrogenase, cytochrome b subunit; PFAM: cytochrome B561; SPTR: A8EUQ7 Ni/Fe hydrogenase, cytochrome b subunit; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 1340956..1341645 Arcobacter nitrofigilis DSM 7299 9171525 YP_003655533.1 CDS Arnit_1368 NC_014166.1 1341642 1342205 D COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: abu:Abu_1425 Ni/Fe hydrogenase, expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; SPTR: A8EUQ6 Ni/Fe hydrogenase, expression/formation protein; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; hydrogenase maturation protease 1341642..1342205 Arcobacter nitrofigilis DSM 7299 9171526 YP_003655534.1 CDS Arnit_1369 NC_014166.1 1342189 1343847 D KEGG: abu:Abu_1424 hypothetical protein; SPTR: A8EUQ5 Putative uncharacterized protein; hypothetical protein 1342189..1343847 Arcobacter nitrofigilis DSM 7299 9171527 YP_003655535.1 CDS Arnit_1370 NC_014166.1 1343857 1346085 D COGs: COG0068 Hydrogenase maturation factor; InterProIPR017968:IPR001792:IPR011125:IPR006070:IPR 004421:IPR017945; KEGG: abu:Abu_1423 transcriptional regulatory protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; SPTR: A8EUQ4 Transcriptional regulatory protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; Sua5/YciO/YrdC/YwlC family protein; (NiFe) hydrogenase maturation protein HypF 1343857..1346085 Arcobacter nitrofigilis DSM 7299 9171528 YP_003655536.1 CDS Arnit_1371 NC_014166.1 1346277 1348283 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_0789 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESY0 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 1346277..1348283 Arcobacter nitrofigilis DSM 7299 9171529 YP_003655537.1 CDS Arnit_1372 NC_014166.1 1348298 1348501 R KEGG: pph:Ppha_1478 hypothetical protein; SPTR: C5S7R9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892); hypothetical protein complement(1348298..1348501) Arcobacter nitrofigilis DSM 7299 9171530 YP_003655538.1 CDS Arnit_1373 NC_014166.1 1348600 1348896 R KEGG: abu:Abu_1417 hypothetical protein; SPTR: A8EUP8 Putative uncharacterized protein; hypothetical protein complement(1348600..1348896) Arcobacter nitrofigilis DSM 7299 9171531 YP_003655539.1 CDS Arnit_1374 NC_014166.1 1348995 1349528 D KEGG: abu:Abu_0750 hypothetical protein; SPTR: A8ESU1 Putative uncharacterized protein; hypothetical protein 1348995..1349528 Arcobacter nitrofigilis DSM 7299 9171532 YP_003655540.1 CDS Arnit_1375 NC_014166.1 1349533 1350189 R KEGG: abu:Abu_1409 hypothetical protein; SPTR: A8EUP0 Putative uncharacterized protein; hypothetical protein complement(1349533..1350189) Arcobacter nitrofigilis DSM 7299 9171533 YP_003655541.1 CDS Arnit_1376 NC_014166.1 1350273 1350611 D InterPro IPR009710; KEGG: dat:HRM2_17470 hypothetical protein; PFAM: protein of unknown function DUF1291; SPTR: C0QB52 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family; hypothetical protein 1350273..1350611 Arcobacter nitrofigilis DSM 7299 9171534 YP_003655542.1 CDS Arnit_1377 NC_014166.1 1350598 1351746 R InterPro IPR011701:IPR016196; KEGG: hhe:HH1109 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: A1ZUS3 MFS permease (Drug); PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(1350598..1351746) Arcobacter nitrofigilis DSM 7299 9171535 YP_003655543.1 CDS Arnit_1378 NC_014166.1 1351862 1352254 D InterPro IPR003731; KEGG: wsu:WS0215 hypothetical protein; SPTR: C5F024 Putative uncharacterized protein; PFAM: Dinitrogenase iron-molybdenum cofactor; hypothetical protein 1351862..1352254 Arcobacter nitrofigilis DSM 7299 9171536 YP_003655544.1 CDS Arnit_1379 NC_014166.1 1352375 1353151 D COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR003495:IPR012202:IPR004392; KEGG: abu:Abu_1408 hydrogenase expression/formation protein HypB; PFAM: cobalamin synthesis protein P47K; SPTR: A8EUN9 Hydrogenase expression/formation protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 1352375..1353151 Arcobacter nitrofigilis DSM 7299 9171537 YP_003655545.1 CDS Arnit_1380 NC_014166.1 1353204 1353485 D COGs: COG0298 Hydrogenase maturation factor; InterPro IPR000276:IPR001109; KEGG: abu:Abu_1407 hydrogenase expression/formation protein HypC; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); SPTR: A8EUN8 Hydrogenase expression/formation protein HypC; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1353204..1353485 Arcobacter nitrofigilis DSM 7299 9171538 YP_003655546.1 CDS Arnit_1381 NC_014166.1 1353491 1354615 D COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: tdn:Suden_1428 hydrogenase formation HypD protein; PFAM: hydrogenase formation HypD protein; SPTR: Q30QM6 Hydrogenase formation HypD protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 1353491..1354615 Arcobacter nitrofigilis DSM 7299 9171539 YP_003655547.1 CDS Arnit_1382 NC_014166.1 1354616 1355335 D COGs: COG0518 GMP synthase - Glutamine amidotransferase domain; InterPro IPR000991:IPR017926; KEGG: cph:Cpha266_0839 glutamine amidotransferase; PFAM: glutamine amidotransferase class-I; SPTR: A1BER3 Glutamine amidotransferase class-I; PFAM: Glutamine amidotransferase class-I; glutamine amidotransferase 1354616..1355335 Arcobacter nitrofigilis DSM 7299 9171540 YP_003655548.1 CDS Arnit_1383 NC_014166.1 1355328 1356326 D COGs: COG0309 Hydrogenase maturation factor; InterPro IPR000728:IPR010918:IPR011854:IPR016188; KEGG: abu:Abu_1401 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; SPTR: B6BMU9 Hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 1355328..1356326 Arcobacter nitrofigilis DSM 7299 9171541 YP_003655549.1 CDS Arnit_1384 NC_014166.1 1356447 1356788 D COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); InterPro IPR020538:IPR000688; KEGG: abu:Abu_1400 hydrogenase expression/formation protein HypA; PFAM: hydrogenase expression/synthesis HypA; SPTR: A8EUN1 Hydrogenase expression/formation protein HypA; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 1356447..1356788 Arcobacter nitrofigilis DSM 7299 9171542 YP_003655550.1 CDS Arnit_1385 NC_014166.1 1356879 1358774 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR004010; KEGG: tdn:Suden_0965 cache sensor signal transduction histidine kinase; PFAM: GGDEF domain containing protein; Cache domain protein; SMART: GGDEF domain containing protein; SPTR: B6BIH5 Cache sensor signal transduction histidine kinase; TIGRFAM: diguanylate cyclase; PFAM: Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1356879..1358774 Arcobacter nitrofigilis DSM 7299 9171543 YP_003655551.1 CDS Arnit_1386 NC_014166.1 1358851 1359978 D COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828:IPR000709; KEGG: cla:Cla_1110 branched-chain amino-acid ABC transporter, periplasmic binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: C1ZXK0 ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region; extracellular ligand-binding receptor 1358851..1359978 Arcobacter nitrofigilis DSM 7299 9171544 YP_003655552.1 CDS Arnit_1387 NC_014166.1 1360102 1360998 D COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: cff:CFF8240_0400 hydrophobic amino acid ABC transporter permease/ATP-binding protein; PFAM: inner-membrane translocator; SPTR: C1ZXJ9 Branched-chain amino acid ABC-type transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1360102..1360998 Arcobacter nitrofigilis DSM 7299 9171545 YP_003655553.1 CDS Arnit_1388 NC_014166.1 1361001 1362041 D COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: cff:CFF8240_0401 ABC transport system permease protein; PFAM: inner-membrane translocator; SPTR: C1ZXJ8 ABC-type branched-chain amino acid transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1361001..1362041 Arcobacter nitrofigilis DSM 7299 9171546 YP_003655554.1 CDS Arnit_1389 NC_014166.1 1362038 1362805 D COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: cla:Cla_1114 branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1ZXJ7 ABC-type branched-chain amino acid transport system, ATPase component; PFAM: ABC transporter; ABC transporter-like protein 1362038..1362805 Arcobacter nitrofigilis DSM 7299 9171547 YP_003655555.1 CDS Arnit_1390 NC_014166.1 1362798 1363496 D COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: wsu:WS1466 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q7M8R8 ABC TRANSPORT SYSTEM ATP-BINDING PROTEIN; PFAM: ABC transporter; ABC transporter-like protein 1362798..1363496 Arcobacter nitrofigilis DSM 7299 9171548 YP_003655556.1 CDS Arnit_1391 NC_014166.1 1363573 1363974 D KEGG: abu:Abu_1399 hypothetical protein; SPTR: A8EUN0 Putative uncharacterized protein; hypothetical protein 1363573..1363974 Arcobacter nitrofigilis DSM 7299 9171549 YP_003655557.1 CDS Arnit_1392 NC_014166.1 1363971 1364342 R KEGG: ppr:PBPRB0253 hypothetical protein; SPTR: Q6LL93 Putative uncharacterized protein SCM1.35C; hypothetical protein complement(1363971..1364342) Arcobacter nitrofigilis DSM 7299 9171550 YP_003655558.1 CDS Arnit_1393 NC_014166.1 1364430 1364630 D KEGG: abu:Abu_1398 hypothetical protein; SPTR: A8EUM9 Putative uncharacterized protein; hypothetical protein 1364430..1364630 Arcobacter nitrofigilis DSM 7299 9171551 YP_003655559.1 CDS Arnit_1394 NC_014166.1 1364620 1364835 D KEGG: abu:Abu_1397 hypothetical protein; SPTR: A8EUM8 Putative uncharacterized protein; hypothetical protein 1364620..1364835 Arcobacter nitrofigilis DSM 7299 9171552 YP_003655560.1 CDS Arnit_1395 NC_014166.1 1364832 1365293 D InterPro IPR012902; KEGG: abu:Abu_1396 hypothetical protein; SPTR: A8EUM7 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1364832..1365293 Arcobacter nitrofigilis DSM 7299 9171553 YP_003655561.1 CDS Arnit_1396 NC_014166.1 1365290 1367140 D COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterProIPR014001:IPR001650:IPR011545:IPR014021:IPR 005259; KEGG: abu:Abu_1395 primosome assembly protein PriA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8EUM6 Primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; primosomal protein N' 1365290..1367140 Arcobacter nitrofigilis DSM 7299 9171554 YP_003655562.1 CDS Arnit_1397 NC_014166.1 1367212 1368399 D COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451:IPR011004; KEGG: abu:Abu_1392 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD; SPTR: A8EUM3 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1367212..1368399 Arcobacter nitrofigilis DSM 7299 9171555 YP_003655563.1 CDS Arnit_1398 NC_014166.1 1368473 1370305 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: tdn:Suden_1484 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q30QH0 Diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1368473..1370305) Arcobacter nitrofigilis DSM 7299 9171556 YP_003655564.1 CDS Arnit_1399 NC_014166.1 1370349 1371653 R COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: abu:Abu_0998 hypothetical protein; PFAM: Peptidase M23; SPTR: A8ETI4 Putative uncharacterized protein; PFAM: Peptidase family M23; peptidase M23 complement(1370349..1371653) Arcobacter nitrofigilis DSM 7299 9171557 YP_003655565.1 CDS Arnit_1400 NC_014166.1 1371646 1372464 R InterPro IPR017970; KEGG: abu:Abu_0999 cell division protein FtsX; SPTR: A8ETI5 Cell division protein FtsX; cell division protein FtsX complement(1371646..1372464) Arcobacter nitrofigilis DSM 7299 9171558 YP_003655566.1 CDS Arnit_1401 NC_014166.1 1372451 1373113 R COGs: COG2884 ATPase involved in cell division; InterPro IPR003593:IPR017871:IPR003439; KEGG: abu:Abu_1000 cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETI6 Cell division ATP-binding protein FtsE; PFAM: ABC transporter; ABC transporter-like protein complement(1372451..1373113) Arcobacter nitrofigilis DSM 7299 9171559 YP_003655567.1 CDS Arnit_1402 NC_014166.1 1373100 1374302 R COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; InterPro IPR003358; KEGG: abu:Abu_1001 tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; PRIAM: tRNA (guanine-N(7)-)-methyltransferase; SPTR: A8ETI7 Putative uncharacterized protein; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(1373100..1374302) Arcobacter nitrofigilis DSM 7299 9171560 YP_003655568.1 CDS Arnit_1403 NC_014166.1 1374304 1375578 R COGs: COG3401 Fibronectin type 3 domain-containing protein; InterPro IPR003961:IPR008957; KEGG: abu:Abu_1002 fibronectin type III domain-containing protein; PFAM: Fibronectin type III domain protein; SPTR: A8ETI8 Fibronectin type III domain protein; PFAM: Fibronectin type III domain; fibronectin type III domain-containing protein complement(1374304..1375578) Arcobacter nitrofigilis DSM 7299 9171561 YP_003655569.1 CDS Arnit_1404 NC_014166.1 1375526 1376488 R COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterProIPR002942:IPR006224:IPR006145:IPR006225:IPR 020103; KEGG: abu:Abu_1003 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: A8ETI9 Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; pseudouridine synthase complement(1375526..1376488) Arcobacter nitrofigilis DSM 7299 9171562 YP_003655570.1 CDS Arnit_1405 NC_014166.1 1376508 1377614 D COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: abu:Abu_1004 rod shape-determining protein RodA; PFAM: cell cycle protein; SPTR: A8ETJ0 Rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; cell cycle protein 1376508..1377614 Arcobacter nitrofigilis DSM 7299 9171563 YP_003655571.1 CDS Arnit_1406 NC_014166.1 1377614 1378465 D COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR020855:IPR006035:IPR005925; KEGG: cpe:CPE0551 agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: B1BND6 Agmatinase; TIGRFAM: agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; agmatinase 1377614..1378465 Arcobacter nitrofigilis DSM 7299 9171564 YP_003655572.1 CDS Arnit_1407 NC_014166.1 1378598 1379143 D KEGG: abu:Abu_1038 hypothetical protein; SPTR: A8ETM4 Putative uncharacterized protein; TIGRFAM: outer membrane insertion C-terminal signal; hypothetical protein 1378598..1379143 Arcobacter nitrofigilis DSM 7299 9171565 YP_003655573.1 CDS Arnit_1408 NC_014166.1 1379171 1380091 R KEGG: cth:Cthe_2304 hypothetical protein; SPTR: A3DHS7 Putative uncharacterized protein; PFAM: Methylenetetrahydrofolate reductase; hypothetical protein complement(1379171..1380091) Arcobacter nitrofigilis DSM 7299 9171566 YP_003655574.1 CDS Arnit_1409 NC_014166.1 1380139 1380945 R InterPro IPR006260; KEGG: abu:Abu_1005 hypothetical protein; SPTR: A8ETJ1 Conserved hypothetical membrane protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB family protein complement(1380139..1380945) Arcobacter nitrofigilis DSM 7299 9171567 YP_003655575.1 CDS Arnit_1410 NC_014166.1 1381003 1382283 D COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR015421:IPR004639:IPR015424; KEGG: abu:Abu_1006 glutamate-1-semialdehyde aminotransferase; PFAM: aminotransferase class-III; SPTR: A8ETJ2 Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 1381003..1382283 Arcobacter nitrofigilis DSM 7299 9171568 YP_003655576.1 CDS Arnit_1411 NC_014166.1 1382293 1382607 D COGs: COG3123 conserved hypothetical protein; InterPro IPR009664; KEGG: abu:Abu_1007 hypothetical protein; PFAM: protein of unknown function DUF1255; SPTR: A8ETJ3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1255); hypothetical protein 1382293..1382607 Arcobacter nitrofigilis DSM 7299 9171569 YP_003655577.1 CDS Arnit_1412 NC_014166.1 1382616 1382927 D KEGG: abu:Abu_1008 hypothetical protein; SPTR: A8ETJ4 Putative uncharacterized protein; hypothetical protein 1382616..1382927 Arcobacter nitrofigilis DSM 7299 9171570 YP_003655578.1 CDS Arnit_1413 NC_014166.1 1382917 1383447 D KEGG: abu:Abu_1009 hypothetical protein; SPTR: A8ETJ5 Putative uncharacterized protein; hypothetical protein 1382917..1383447 Arcobacter nitrofigilis DSM 7299 9171571 YP_003655579.1 CDS Arnit_1414 NC_014166.1 1383434 1384129 R KEGG: abu:Abu_1010 hypothetical protein; SPTR: A8ETJ6 Putative uncharacterized protein; hypothetical protein complement(1383434..1384129) Arcobacter nitrofigilis DSM 7299 9171572 YP_003655580.1 CDS Arnit_1415 NC_014166.1 1384136 1386016 R COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943:IPR009042:IPR007627:IPR007624:IPR 007630:IPR011991:IPR014284:IPR012760:IPR013325:IPR013324; KEGG: abu:Abu_1011 RNA polymerase sigma factor RpoD; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; SPTR: A8ETJ7 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RpoD subfamily RNA polymerase sigma-70 factor subunit complement(1384136..1386016) Arcobacter nitrofigilis DSM 7299 9171573 YP_003655581.1 CDS Arnit_1416 NC_014166.1 1386221 1386721 D COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR000573:IPR015928:IPR011827; KEGG: abu:Abu_1012 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; SPTR: A8ETJ8 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 1386221..1386721 Arcobacter nitrofigilis DSM 7299 9171574 YP_003655582.1 CDS Arnit_1417 NC_014166.1 1386724 1387791 D COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR019818:IPR001804:IPR004429; KEGG: abu:Abu_1013 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: A8ETJ9 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1386724..1387791 Arcobacter nitrofigilis DSM 7299 9171575 YP_003655583.1 CDS Arnit_1418 NC_014166.1 1387861 1388790 D COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR003156:IPR016877; KEGG: abu:Abu_1014 exopolyphosphatase-related protein; PFAM: phosphoesterase DHHA1; SPTR: A8ETK0 Exopolyphosphatase-related protein; PFAM: DHHA1 domain; phosphoesterase DHHA1 1387861..1388790 Arcobacter nitrofigilis DSM 7299 9171576 YP_003655584.1 CDS Arnit_1419 NC_014166.1 1388932 1389687 D COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: cbo:CBO1149 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6PUR8 ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 1388932..1389687 Arcobacter nitrofigilis DSM 7299 9171577 YP_003655585.1 CDS Arnit_1420 NC_014166.1 1389688 1390353 D COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: cbo:CBO1150 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A5I0Z1 ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit 1389688..1390353 Arcobacter nitrofigilis DSM 7299 9171578 YP_003655586.1 CDS Arnit_1421 NC_014166.1 1390613 1391410 D COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: cbo:CBO1151 ABC transporter, substrate-binding lipoprotein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C6PUR6 Extracellular solute-binding protein family 3; PFAM: Bacterial extracellular solute-binding proteins, family 3; family 3 extracellular solute-binding protein 1390613..1391410 Arcobacter nitrofigilis DSM 7299 9171579 YP_003655587.1 CDS Arnit_1422 NC_014166.1 1391518 1392924 D COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261:IPR002933:IPR010964:IPR011650; KEGG: hor:Hore_08190 Xaa-His dipeptidase; PFAM: peptidase M20; SPTR: B8CWA7 Xaa-His dipeptidase; TIGRFAM: dipeptidase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: dipeptidase, putative; dipeptidase 1391518..1392924 Arcobacter nitrofigilis DSM 7299 9171580 YP_003655588.1 CDS Arnit_1423 NC_014166.1 1392944 1393306 R COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011151:IPR011146; KEGG: abu:Abu_1015 HIT family protein; PFAM: histidine triad (HIT) protein; SPTR: A8ETK1 HIT family protein; PFAM: HIT domain; histidine triad (HIT) protein complement(1392944..1393306) Arcobacter nitrofigilis DSM 7299 9171581 YP_003655589.1 CDS Arnit_1424 NC_014166.1 1393315 1395729 R COGs: COG2206 HD-GYP domain; InterPro IPR003018:IPR003607:IPR006674; KEGG: tdn:Suden_0930 metal dependent phosphohydrolase; PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region; SPTR: Q30S23 Metal dependent phosphohydrolase; PFAM: cAMP phosphodiesterases class-II; GAF domain; metal dependent phosphohydrolase complement(1393315..1395729) Arcobacter nitrofigilis DSM 7299 9171582 YP_003655590.1 CDS Arnit_1425 NC_014166.1 1396147 1396509 D COGs: COG0099 Ribosomal protein S13; InterPro IPR018269:IPR001892:IPR019980:IPR010979; KEGG: abu:Abu_1017 30S ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: A8ETK3 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 1396147..1396509 Arcobacter nitrofigilis DSM 7299 9171583 YP_003655591.1 CDS Arnit_1426 NC_014166.1 1396519 1396911 D COGs: COG0100 Ribosomal protein S11; InterPro IPR018102:IPR001971:IPR019981; KEGG: abu:Abu_1018 30S ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: A8ETK4 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 1396519..1396911 Arcobacter nitrofigilis DSM 7299 9171584 YP_003655592.1 CDS Arnit_1427 NC_014166.1 1396922 1397548 D COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR002942:IPR001912:IPR005709; KEGG: abu:Abu_1019 30S ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: A8ETK5 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 1396922..1397548 Arcobacter nitrofigilis DSM 7299 9171585 YP_003655593.1 CDS Arnit_1428 NC_014166.1 1397568 1398566 D COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterProIPR011263:IPR011260:IPR011261:IPR011262:IPR 011773:IPR009025; KEGG: abu:Abu_1020 DNA-directed RNA polymerase subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: A8ETK6 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 1397568..1398566 Arcobacter nitrofigilis DSM 7299 9171586 YP_003655594.1 CDS Arnit_1429 NC_014166.1 1398579 1398929 D COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: abu:Abu_1021 50S ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: A8ETK7 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 1398579..1398929 Arcobacter nitrofigilis DSM 7299 9171587 YP_003655595.1 CDS Arnit_1430 NC_014166.1 1399077 1400438 D COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR020556:IPR000120:IPR004412; KEGG: abu:Abu_1022 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; SPTR: A8ETK8 Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit; glutamyl-tRNA(Gln) amidotransferase subunit A 1399077..1400438 Arcobacter nitrofigilis DSM 7299 9171588 YP_003655596.1 CDS Arnit_1431 NC_014166.1 1400455 1401900 D COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR000644:IPR015875:IPR001093:IPR018529:IPR 013785:IPR005990; KEGG: abu:Abu_1023 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: A8ETK9 Inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; inosine-5'-monophosphate dehydrogenase 1400455..1401900 Arcobacter nitrofigilis DSM 7299 9171589 YP_003655597.1 CDS Arnit_1433 NC_014166.1 1402807 1403349 D KEGG: tcx:Tcr_2182 hypothetical protein; SPTR: C1SHZ4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2975); hypothetical protein 1402807..1403349 Arcobacter nitrofigilis DSM 7299 9171591 YP_003655598.1 CDS Arnit_1434 NC_014166.1 1403362 1403562 D COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: tcx:Tcr_2183 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein; SPTR: Q31DK2 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix; XRE family transcriptional regulator 1403362..1403562 Arcobacter nitrofigilis DSM 7299 9171592 YP_003655599.1 CDS Arnit_1435 NC_014166.1 1403838 1404083 D InterPro IPR003756:IPR006442; KEGG: dal:Dalk_1773 prevent-host-death family protein; PFAM: protein of unknown function DUF172; SPTR: B8FFR5 Prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 1403838..1404083 Arcobacter nitrofigilis DSM 7299 9171593 YP_003655600.1 CDS Arnit_1436 NC_014166.1 1404077 1404346 D COGs: COG4115 conserved hypothetical protein; InterPro IPR009614:IPR012753; KEGG: dol:Dole_2607 addiction module antitoxin; PFAM: Addiction module toxin Txe/YoeB; SPTR: A8SAR2 Putative uncharacterized protein; TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: addiction module toxin, RelE/StbE family; toxin-antitoxin system, toxin component, Txe/YoeB family; Txe/YoeB family addiction module toxin 1404077..1404346 Arcobacter nitrofigilis DSM 7299 9171594 YP_003655601.1 CDS Arnit_1437 NC_014166.1 1404411 1404902 R KEGG: hypothetical protein; SPTR: A3I0E2 Putative uncharacterized protein; hypothetical protein complement(1404411..1404902) Arcobacter nitrofigilis DSM 7299 9171595 YP_003655602.1 CDS Arnit_1438 NC_014166.1 1404983 1405318 R COGs: COG2337 Growth inhibitor; InterPro IPR003477:IPR011067; KEGG: lil:LA1781 ppGpp-regulated growth inhibitor ChpA/MazF; PFAM: PemK family protein; SPTR: A7BW34 PemK-like protein; PFAM: PemK-like protein; MazE/toxin transcriptional modulator MazF complement(1404983..1405318) Arcobacter nitrofigilis DSM 7299 9171596 YP_003655603.1 CDS Arnit_1439 NC_014166.1 1405312 1405557 R COGs: COG2336 Growth regulator; InterPro IPR007159; KEGG: ect:ECIAI39_3202 antitoxin MazE; PFAM: SpoVT/AbrB domain protein; SPTR: B7NV73 Antitoxin of the ChpA-ChpR toxin-antitoxin system; PFAM: SpoVT / AbrB like domain; transcriptional regulator/antitoxin MazE complement(1405312..1405557) Arcobacter nitrofigilis DSM 7299 9171597 YP_003655604.1 CDS Arnit_1440 NC_014166.1 1405708 1406154 D KEGG: paa:Paes_0464 cytochrome c, putative; SPTR: B4S522 Cytochrome c, putative; cytochrome c 1405708..1406154 Arcobacter nitrofigilis DSM 7299 9171598 YP_003655605.1 CDS Arnit_1441 NC_014166.1 1406301 1406924 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: dsa:Desal_3432 lysine exporter protein (LysE/YggA); PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: C6BSM4 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; lysine exporter protein complement(1406301..1406924) Arcobacter nitrofigilis DSM 7299 9171599 YP_003655606.1 CDS Arnit_1442 NC_014166.1 1407082 1407534 D InterPro IPR013096:IPR014710:IPR011051; KEGG: abu:Abu_1024 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: A8ETL0 Putative uncharacterized protein; PFAM: Cupin domain; cupin 1407082..1407534 Arcobacter nitrofigilis DSM 7299 9171600 YP_003655607.1 CDS Arnit_1443 NC_014166.1 1407623 1407886 D KEGG: rps3; small ribosomal protein 3; SPTR: A5J030 Small ribosomal protein 3; small ribosomal protein 3 1407623..1407886 Arcobacter nitrofigilis DSM 7299 9171601 YP_003655608.1 CDS Arnit_1444 NC_014166.1 1407886 1408149 D COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: sun:SUN_1130 hypothetical protein; PFAM: Excinuclease ABC C subunit domain protein; SPTR: A6Q9C6 Putative uncharacterized protein; PFAM: GIY-YIG catalytic domain; excinuclease ABC C subunit domain-containing protein 1407886..1408149 Arcobacter nitrofigilis DSM 7299 9171602 YP_003655609.1 CDS Arnit_1445 NC_014166.1 1408160 1408654 R COGs: COG0716 Flavodoxins; InterPro IPR008254:IPR010086:IPR001094; KEGG: hhe:HH0712 flavodoxin FldA; PFAM: flavodoxin/nitric oxide synthase; SPTR: C5F298 Flavodoxin; TIGRFAM: flavodoxin; PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain; flavodoxin complement(1408160..1408654) Arcobacter nitrofigilis DSM 7299 9171603 YP_003655610.1 CDS Arnit_1446 NC_014166.1 1408815 1409162 D COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: bfs:BF0426 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: B3C6Z4 Putative uncharacterized protein; PFAM: Domain of unknown function DUF59; hypothetical protein 1408815..1409162 Arcobacter nitrofigilis DSM 7299 9171604 YP_003655611.1 CDS Arnit_1447 NC_014166.1 1409159 1409803 R KEGG: scl:sce8527 hypothetical protein; SPTR: A9FZ05 Putative uncharacterized protein; hypothetical protein complement(1409159..1409803) Arcobacter nitrofigilis DSM 7299 9171605 YP_003655612.1 CDS Arnit_1448 NC_014166.1 1409814 1410389 R COGs: COG0586 membrane-associated protein; KEGG: nis:NIS_0705 hypothetical protein; SPTR: A6Q2W0 Putative uncharacterized protein; PFAM: SNARE associated Golgi protein; hypothetical protein complement(1409814..1410389) Arcobacter nitrofigilis DSM 7299 9171606 YP_003655613.1 CDS Arnit_1449 NC_014166.1 1410493 1411428 D InterPro IPR001818; KEGG: abb:ABBFA_003506 Matrixin family protein; PFAM: peptidase M10A and M12B matrixin and adamalysin; SPTR: B7IBK4 Matrixin superfamily; PFAM: Matrixin; peptidase M10A and M12B matrixin and adamalysin 1410493..1411428 Arcobacter nitrofigilis DSM 7299 9171607 YP_003655614.1 CDS Arnit_1450 NC_014166.1 1411720 1412058 D KEGG: hypothetical protein; SPTR: C5NVK8 Putative late embryogenesis abundant protein; hypothetical protein 1411720..1412058 Arcobacter nitrofigilis DSM 7299 9171608 YP_003655615.1 CDS Arnit_1451 NC_014166.1 1412198 1412494 R KEGG: ppf:Pput_3688 hypothetical protein; SPTR: B6BNH3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3144); hypothetical protein complement(1412198..1412494) Arcobacter nitrofigilis DSM 7299 9171609 YP_003655616.1 CDS Arnit_1452 NC_014166.1 1412602 1413702 D COGs: COG2603 ATPase; InterPro IPR001763:IPR017582; KEGG: sun:SUN_1828 tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; SPTR: A6QBB6 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase; tRNA 2-selenouridine synthase 1412602..1413702 Arcobacter nitrofigilis DSM 7299 9171610 YP_003655617.1 CDS Arnit_1453 NC_014166.1 1413708 1414907 R COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: abu:Abu_2220 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8EWW0 NADH dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1413708..1414907) Arcobacter nitrofigilis DSM 7299 9171611 YP_003655618.1 CDS Arnit_1454 NC_014166.1 1415147 1415899 D InterPro IPR004843:IPR011152; KEGG: cps:CPS_3115 Ser/Thr protein phosphatase family protein; PFAM: metallophosphoesterase; SPTR: Q47ZF8 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 1415147..1415899 Arcobacter nitrofigilis DSM 7299 9171612 YP_003655619.1 CDS Arnit_1455 NC_014166.1 1415896 1416249 D KEGG: hba:Hbal_0541 putative thiol-disulphide oxidoreductase DCC; SPTR: C6XN73 Putative thiol-disulphide oxidoreductase DCC; putative thiol-disulfide oxidoreductase DCC 1415896..1416249 Arcobacter nitrofigilis DSM 7299 9171613 YP_003655620.1 CDS Arnit_1456 NC_014166.1 1416392 1416814 D InterPro IPR013096:IPR011051; KEGG: cts:Ctha_1275 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: B3QZ45 Cupin 2 conserved barrel domain protein; PFAM: Cupin domain; cupin 1416392..1416814 Arcobacter nitrofigilis DSM 7299 9171614 YP_003655621.1 CDS Arnit_1457 NC_014166.1 1416929 1417486 D COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: maq:Maqu_2975 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A1U4Y0 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 2; hypothetical protein 1416929..1417486 Arcobacter nitrofigilis DSM 7299 9171615 YP_003655622.1 CDS Arnit_1458 NC_014166.1 1417505 1418509 D COGs: COG1816 Adenosine deaminase; InterPro IPR001365:IPR006330; KEGG: pcr:Pcryo_0456 adenosine deaminase; PFAM: adenosine/AMP deaminase; PRIAM: Adenosine deaminase; SPTR: Q1QDL4 Adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; adenosine deaminase 1417505..1418509 Arcobacter nitrofigilis DSM 7299 9171616 YP_003655623.1 CDS Arnit_1459 NC_014166.1 1418518 1419450 D COGs: COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent); InterPro IPR003726; KEGG: bsu:BSU02410 homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; SPTR: C2A2N3 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent); PFAM: Homocysteine S-methyltransferase; homocysteine S-methyltransferase 1418518..1419450 Arcobacter nitrofigilis DSM 7299 9171617 YP_003655624.1 CDS Arnit_1460 NC_014166.1 1419495 1419722 D KEGG: merozoite surface protein 3 beta (MSP3b); SPTR: Q64JV1 Merozoite surface protein 3b (Fragment); hypothetical protein 1419495..1419722 Arcobacter nitrofigilis DSM 7299 9171618 YP_003655625.1 CDS Arnit_1461 NC_014166.1 1419746 1420378 D COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: hch:HCH_00127 putative threonine efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: C1SKU0 Putative threonine efflux protein; PFAM: LysE type translocator; lysine exporter protein 1419746..1420378 Arcobacter nitrofigilis DSM 7299 9171619 YP_003655626.1 CDS Arnit_1462 NC_014166.1 1420391 1420879 R KEGG: abu:Abu_1025 hypothetical protein; SPTR: A8ETL1 Putative uncharacterized protein; hypothetical protein complement(1420391..1420879) Arcobacter nitrofigilis DSM 7299 9171620 YP_003655627.1 CDS Arnit_1463 NC_014166.1 1420936 1421550 R COGs: COG3124 conserved hypothetical protein; InterPro IPR007431; KEGG: cyc:PCC7424_1921 protein of unknown function DUF479; PFAM: protein of unknown function DUF479; SPTR: B4AZU8 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF479; hypothetical protein complement(1420936..1421550) Arcobacter nitrofigilis DSM 7299 9171621 YP_003655628.1 CDS Arnit_1464 NC_014166.1 1421610 1422689 R InterPro IPR007272; KEGG: mag:amb0857 transporter component; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: A4TYH9 YeeE/YedE; PFAM: YeeE/YedE family (DUF395); hypothetical protein complement(1421610..1422689) Arcobacter nitrofigilis DSM 7299 9171622 YP_003655629.1 CDS Arnit_1465 NC_014166.1 1422809 1423072 R KEGG: abu:Abu_1378 hypothetical protein; SPTR: A8EUK9 Putative uncharacterized protein; hypothetical protein complement(1422809..1423072) Arcobacter nitrofigilis DSM 7299 9171623 YP_003655630.1 CDS Arnit_1466 NC_014166.1 1423089 1423562 R COGs: COG2731 Beta-galactosidase beta subunit; InterPro IPR004375; KEGG: abu:Abu_0837 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8ET28 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF386); TIGRFAM: conserved hypothetical protein; hypothetical protein complement(1423089..1423562) Arcobacter nitrofigilis DSM 7299 9171624 YP_003655631.1 CDS Arnit_1467 NC_014166.1 1423574 1424635 R COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: pin:Ping_3150 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A1SZC3 TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; family 7 extracellular solute-binding protein complement(1423574..1424635) Arcobacter nitrofigilis DSM 7299 9171625 YP_003655632.1 CDS Arnit_1468 NC_014166.1 1424754 1426586 D COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR017871:IPR003439; KEGG: tdn:Suden_0143 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B6BGN1 ATP-binding protein of an ABC transporter complex; PFAM: ABC transporter; ABC transporter-like protein 1424754..1426586 Arcobacter nitrofigilis DSM 7299 9171626 YP_003655633.1 CDS Arnit_1469 NC_014166.1 1426589 1427038 D KEGG: amr:AM1_0690 hypothetical protein; SPTR: A4BD05 Putative uncharacterized protein; PFAM: Putative phosphatase (DUF442); hypothetical protein 1426589..1427038 Arcobacter nitrofigilis DSM 7299 9171627 YP_003655634.1 CDS Arnit_1470 NC_014166.1 1427055 1427786 R COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: hch:HCH_02826 dienelactone hydrolase; PFAM: dienelactone hydrolase; SPTR: C1SI66 Dienelactone hydrolase-like enzyme; PFAM: Dienelactone hydrolase family; dienelactone hydrolase complement(1427055..1427786) Arcobacter nitrofigilis DSM 7299 9171628 YP_003655635.1 CDS Arnit_1471 NC_014166.1 1427937 1429043 D COGs: COG2021 Homoserine acetyltransferase; InterPro IPR000073:IPR008220:IPR006296; KEGG: abu:Abu_1376 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; PRIAM: Homoserine O-acetyltransferase; SPTR: A8EUK7 Homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; homoserine O-acetyltransferase 1427937..1429043 Arcobacter nitrofigilis DSM 7299 9171629 YP_003655636.1 CDS Arnit_1472 NC_014166.1 1429040 1429240 D InterPro IPR003761; KEGG: abu:Abu_1375 hypothetical protein; PFAM: Exonuclease VII small subunit; SPTR: A8EUK6 Putative uncharacterized protein; PFAM: Exonuclease VII small subunit; exonuclease VII small subunit 1429040..1429240 Arcobacter nitrofigilis DSM 7299 9171630 YP_003655637.1 CDS Arnit_1473 NC_014166.1 1429317 1429979 D COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: nis:NIS_1708 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: A6Q5Q5 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 1429317..1429979 Arcobacter nitrofigilis DSM 7299 9171631 YP_003655638.1 CDS Arnit_1474 NC_014166.1 1429979 1430110 D KEGG: cjj:CJJ81176_pVir0047 hypothetical protein; SPTR: Q8GJA8 Putative uncharacterized protein Cjp47; hypothetical protein 1429979..1430110 Arcobacter nitrofigilis DSM 7299 9171632 YP_003655639.1 CDS Arnit_1475 NC_014166.1 1430091 1430429 D KEGG: cjj:CJJ81176_pVir0047 hypothetical protein; SPTR: Q8GJA8 Putative uncharacterized protein Cjp47; PFAM: PemK-like protein; hypothetical protein 1430091..1430429 Arcobacter nitrofigilis DSM 7299 9171633 YP_003655640.1 CDS Arnit_1476 NC_014166.1 1430926 1432377 D COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052:IPR003356:IPR002296; KEGG: cch:Cag_0807 DNA-methyltransferase, type I restriction-modification enzyme subunit M; PFAM: N-6 DNA methylase; SPTR: Q1VS78 DNA-methyltransferase, type I restriction-modification enzyme subunit M; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; N-6 DNA methylase 1430926..1432377 Arcobacter nitrofigilis DSM 7299 9171634 YP_003655641.1 CDS Arnit_1477 NC_014166.1 1432374 1433525 D COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: pin:Ping_0149 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: C0N6G4 Type I restriction modification DNA specificity domain protein; PFAM: Type I restriction modification DNA specificity domain; restriction modification system DNA specificity domain-containing protein 1432374..1433525 Arcobacter nitrofigilis DSM 7299 9171635 YP_003655642.1 CDS Arnit_1478 NC_014166.1 1433522 1435930 D COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR014001:IPR007409:IPR006935:IPR013670:IPR 014021:IPR001650; KEGG: cch:Cag_0810 DEAD/DEAH box helicase-like; PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: A4ALZ5 DEAD/DEAH box helicase-like protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; EcoEI R protein C-terminal; Type I site-specific deoxyribonuclease 1433522..1435930 Arcobacter nitrofigilis DSM 7299 9171636 YP_003655643.1 CDS Arnit_1479 NC_014166.1 1435966 1436118 D KEGG: hypothetical protein; SPTR: C2A0Q6 Putative uncharacterized protein; hypothetical protein 1435966..1436118 Arcobacter nitrofigilis DSM 7299 9171637 YP_003655644.1 CDS Arnit_1480 NC_014166.1 1436476 1437159 D COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR016040:IPR009036; KEGG: nis:NIS_1273 ThiF/MoeB/HesA family protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: A6Q4H2 ThiF/MoeB/HesA family protein; PFAM: ThiF family; UBA/THIF-type NAD/FAD binding protein 1436476..1437159 Arcobacter nitrofigilis DSM 7299 9171638 YP_003655645.1 CDS Arnit_1481 NC_014166.1 1437287 1440526 D COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR005479:IPR005481:IPR005480:IPR011607:IPR 011761:IPR013817:IPR013816:IPR006275:IPR005483:IPR016185; KEGG: abu:Abu_1372 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: A8EUK3 Carbamoylphosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 1437287..1440526 Arcobacter nitrofigilis DSM 7299 9171639 YP_003655646.1 CDS Arnit_1482 NC_014166.1 1440528 1440971 D KEGG: abu:Abu_1371 hypothetical protein; SPTR: A8EUK2 Putative uncharacterized protein; hypothetical protein 1440528..1440971 Arcobacter nitrofigilis DSM 7299 9171640 YP_003655647.1 CDS Arnit_1483 NC_014166.1 1441032 1442324 D InterPro IPR011579:IPR004256; KEGG: cff:CFF8240_0485 ATPase; PFAM: ATPase; DUF234 DEXX-box ATPase; SPTR: A0RN97 ATPase; PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; ATPase 1441032..1442324 Arcobacter nitrofigilis DSM 7299 9171641 YP_003655648.1 CDS Arnit_1484 NC_014166.1 1442461 1444824 D InterPro IPR011659:IPR002126:IPR010221:IPR015919; KEGG: cja:CJA_1396 putative hemolysin; SPTR: C1SJC9 VCBS repeat-containing protein; TIGRFAM: outer membrane adhesin like proteiin; TIGRFAM: VCBS repeat; outer membrane adhesin-like protein 1442461..1444824 Arcobacter nitrofigilis DSM 7299 9171642 YP_003655649.1 CDS Arnit_1486 NC_014166.1 1445917 1449822 D InterPro IPR001343:IPR018512; KEGG: abu:Abu_2179 hypothetical protein; PFAM: Hemolysin-type calcium-binding region; SPTR: A8EWS0 Putative uncharacterized protein; hemolysin-type calcium-binding region 1445917..1449822 Arcobacter nitrofigilis DSM 7299 9171644 YP_003655650.1 CDS Arnit_1487 NC_014166.1 1450262 1450510 D KEGG: abu:Abu_1560 putative DNA-binding protein; SPTR: A8EV35 Putative DNA-binding protein; putative DNA-binding protein 1450262..1450510 Arcobacter nitrofigilis DSM 7299 9171646 YP_003655651.1 CDS Arnit_1488 NC_014166.1 1450572 1451777 D InterPro IPR007751; KEGG: etw:ECSP_2872 putative virulence factor; PFAM: Protein of unknown function DUF676 hydrolase domain protein; SPTR: D0FVW3 Conserved uncharacterized protein; PFAM: PGAP1-like protein; hypothetical protein 1450572..1451777 Arcobacter nitrofigilis DSM 7299 9171647 YP_003655652.1 CDS Arnit_1489 NC_014166.1 1451770 1452279 D KEGG: etw:ECSP_2871 hypothetical protein; SPTR: C6V1H2 Putative uncharacterized protein; hypothetical protein 1451770..1452279 Arcobacter nitrofigilis DSM 7299 9171648 YP_003655653.1 CDS Arnit_1490 NC_014166.1 1452281 1454263 D KEGG: ebr:ECB_02001 hypothetical protein; SPTR: C6UKP8 Putative uncharacterized protein; hypothetical protein 1452281..1454263 Arcobacter nitrofigilis DSM 7299 9171649 YP_003655654.1 CDS Arnit_1491 NC_014166.1 1454453 1454818 D KEGG: hypothetical protein; SPTR: Q9AVY2 TFIIB related factor hBRF; hypothetical protein 1454453..1454818 Arcobacter nitrofigilis DSM 7299 9171650 YP_003655655.1 CDS Arnit_1492 NC_014166.1 1455667 1456656 D KEGG: bcc:BCc_073 hypothetical protein; SPTR: Q057Z8 TRNA(Ile)-lysidine synthetase; hypothetical protein 1455667..1456656 Arcobacter nitrofigilis DSM 7299 9171651 YP_003655656.1 CDS Arnit_1493 NC_014166.1 1456666 1458063 D KEGG: hypothetical protein; SPTR: Q8I5K3 Conserved Plasmodium protein; hypothetical protein 1456666..1458063 Arcobacter nitrofigilis DSM 7299 9171652 YP_003655657.1 CDS Arnit_1494 NC_014166.1 1458063 1459253 D COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597:IPR011460:IPR011990; KEGG: wsu:WS0385 hypothetical protein; PFAM: protein of unknown function DUF1566; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: B9CY47 HcpE; PFAM: Protein of unknown function (DUF1566); Sel1 repeat; hypothetical protein 1458063..1459253 Arcobacter nitrofigilis DSM 7299 9171653 YP_003655658.1 CDS Arnit_1495 NC_014166.1 1459253 1470460 D COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterProIPR006162:IPR018247:IPR018511:IPR019775:IPR 001343:IPR018512:IPR011049; KEGG: mgm:Mmc1_0729 hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding region; SPTR: A0L5K7 Hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 1459253..1470460 Arcobacter nitrofigilis DSM 7299 9171654 YP_003655659.1 CDS Arnit_1496 NC_014166.1 1470480 1470935 D COGs: COG2994 ACP:hemolysin acyltransferase (hemolysin-activating protein); InterPro IPR003996; KEGG: bra:BRADO6927 RTX toxin-activating lysine-acyltransferase (type I secretion system); PFAM: RTX toxin-activating protein C; SPTR: A8TV76 RTX toxin activating acyltransferase; PFAM: RTX toxin acyltransferase family; RTX toxin-activating protein C 1470480..1470935 Arcobacter nitrofigilis DSM 7299 9171655 YP_003655660.1 CDS Arnit_1497 NC_014166.1 1470941 1472218 D COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: asa:ASA_0523 outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: A4SIG7 Outer membrane protein TolC; PFAM: Outer membrane efflux protein; outer membrane efflux protein 1470941..1472218 Arcobacter nitrofigilis DSM 7299 9171656 YP_003655661.1 CDS Arnit_1498 NC_014166.1 1472211 1474355 D COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR005074:IPR001140:IPR003439:IPR 017940:IPR010132:IPR011527; KEGG: hch:HCH_06117 bacteriocin/lantibiotic ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase; SPTR: Q2S9A9 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; TIGRFAM: type I secretion system ABC transporter, HlyB family; type I secretion system ATPase 1472211..1474355 Arcobacter nitrofigilis DSM 7299 9171657 YP_003655662.1 CDS Arnit_1499 NC_014166.1 1474352 1475674 D COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006144:IPR006143:IPR003997; KEGG: hch:HCH_06116 membrane-fusion protein; PFAM: secretion protein HlyD family protein; SPTR: Q2S9B0 Membrane-fusion protein; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; secretion protein HlyD family protein 1474352..1475674 Arcobacter nitrofigilis DSM 7299 9171658 YP_003655663.1 CDS Arnit_1500 NC_014166.1 1475738 1476676 D COGs: COG4974 Site-specific recombinase XerD; InterProIPR004107:IPR002104:IPR013762:IPR011010:IPR 010998; KEGG: dsa:Desal_3165 integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: C6C215 Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; integrase family protein 1475738..1476676 Arcobacter nitrofigilis DSM 7299 9171659 YP_003655664.1 CDS Arnit_1501 NC_014166.1 1476725 1477687 D InterPro IPR000182:IPR016181; KEGG: ttu:TERTU_3337 hypothetical protein; SPTR: C5BQK3 Putative uncharacterized protein; hypothetical protein 1476725..1477687 Arcobacter nitrofigilis DSM 7299 9171660 YP_003655665.1 CDS Arnit_1502 NC_014166.1 1477650 1478384 R InterPro IPR013216; KEGG: ttu:TERTU_3336 methyltransferase family protein; PFAM: Methyltransferase type 11; SPTR: C5BQK4 Methyltransferase family protein; PFAM: Methyltransferase domain; type 11 methyltransferase complement(1477650..1478384) Arcobacter nitrofigilis DSM 7299 9171661 YP_003655666.1 CDS Arnit_1503 NC_014166.1 1478469 1478639 R KEGG: wsu:WS2030 putative integrase; SPTR: Q7MQT2 Putative uncharacterized protein; putative integrase complement(1478469..1478639) Arcobacter nitrofigilis DSM 7299 9171662 YP_003655667.1 CDS Arnit_1504 NC_014166.1 1478910 1479431 D KEGG: sun:SUN_0023 hypothetical protein; SPTR: A6Q659 Putative uncharacterized protein; hypothetical protein 1478910..1479431 Arcobacter nitrofigilis DSM 7299 9171663 YP_003655668.1 CDS Arnit_1505 NC_014166.1 1479476 1480339 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR005467:IPR004358; KEGG: nam:NAMH_1300 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1ZXM6 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase complement(1479476..1480339) Arcobacter nitrofigilis DSM 7299 9171664 YP_003655669.1 CDS Arnit_1506 NC_014166.1 1480320 1481033 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_0630 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ESH1 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator receiver protein complement(1480320..1481033) Arcobacter nitrofigilis DSM 7299 9171665 YP_003655670.1 CDS Arnit_1507 NC_014166.1 1481287 1482252 D InterPro IPR011871; KEGG: hypothetical protein; SPTR: Q8IE41 Putative uncharacterized protein; TIGRFAM: Fibrobacter succinogenes major paralogous domain; hypothetical protein 1481287..1482252 Arcobacter nitrofigilis DSM 7299 9171666 YP_003655671.1 CDS Arnit_1508 NC_014166.1 1482534 1486508 D KEGG: mmw:Mmwyl1_0783 glycosyl hydrolase BNR repeat-containing glycosyl hydrolase; SPTR: A6VTD8 Glycosyl hydrolase BNR repeat-containing protein; hypothetical protein 1482534..1486508 Arcobacter nitrofigilis DSM 7299 9171667 YP_003655672.1 CDS Arnit_1509 NC_014166.1 1486527 1507442 D InterProIPR018511:IPR011659:IPR001343:IPR019960:IPR 011049; KEGG: bam:Bamb_6371 hypothetical protein; PFAM: Hemolysin-type calcium-binding region; WD40 domain protein beta Propeller; SPTR: Q0B1Q8 Putative uncharacterized protein; TIGRFAM: type 1 secretion C-terminal target domain; TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass); type 1 secretion target domain-containing protein 1486527..1507442 Arcobacter nitrofigilis DSM 7299 9171668 YP_003655673.1 CDS Arnit_1510 NC_014166.1 1507443 1508654 D COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: rma:Rmag_0253 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A1AVS8 Outer membrane efflux protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein 1507443..1508654 Arcobacter nitrofigilis DSM 7299 9171669 YP_003655674.1 CDS Arnit_1511 NC_014166.1 1508707 1508865 R KEGG: u5 small nuclear ribonucleoprotein-specific helicase ; K12854 pre-mRNA-splicing helicase BRR2; SPTR: Q4UB40 U5 small nuclear ribonucleoprotein-specific helicase, putative; u5 small nuclear ribonucleoprotein-specific helicase complement(1508707..1508865) Arcobacter nitrofigilis DSM 7299 9171670 YP_003655675.1 CDS Arnit_1512 NC_014166.1 1508985 1510151 R COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143:IPR003997; KEGG: cli:Clim_2276 type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; SPTR: B3EHD7 Type I secretion membrane fusion protein, HlyD family; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; secretion protein HlyD family protein complement(1508985..1510151) Arcobacter nitrofigilis DSM 7299 9171671 YP_003655676.1 CDS Arnit_1513 NC_014166.1 1510138 1512264 R COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003593:IPR003439:IPR017940:IPR011527; KEGG: cli:Clim_2275 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B3EHD6 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter-like protein complement(1510138..1512264) Arcobacter nitrofigilis DSM 7299 9171672 YP_003655677.1 CDS Arnit_1514 NC_014166.1 1512261 1512683 R InterPro IPR016032:IPR011991; KEGG: cff:CFF8240_0140 two component transcriptional regulator; SPTR: A0RMB7 Two component transcriptional regulator, winged helix family; PFAM: Transcriptional regulatory protein, C terminal; response regulator receiver protein complement(1512261..1512683) Arcobacter nitrofigilis DSM 7299 9171673 YP_003655678.1 CDS Arnit_1515 NC_014166.1 1512972 1514759 D COGs: COG3920 Signal transduction histidine kinase; InterPro IPR005467:IPR003594:IPR011623:IPR011495; KEGG: abu:Abu_1163 two-component sensor histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; SPTR: A8ETZ9 Two-component sensor histidine kinase; PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; signal transduction histidine kinase 1512972..1514759 Arcobacter nitrofigilis DSM 7299 9171674 YP_003655679.1 CDS Arnit_1516 NC_014166.1 1514963 1515670 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR011991:IPR001867; KEGG: sun:SUN_2039 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BJ93 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 1514963..1515670 Arcobacter nitrofigilis DSM 7299 9171675 YP_003655680.1 CDS Arnit_1517 NC_014166.1 1516055 1517671 D COGs: COG2831 Hemolysin activation/secretion protein; InterPro IPR013686:IPR005565; KEGG: wsu:WS0960 hemolysin activation protein HecB; PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; SPTR: Q7MRX6 HECB; PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; polypeptide-transport-associated domain-containing protein 1516055..1517671 Arcobacter nitrofigilis DSM 7299 9171676 YP_003655681.1 CDS Arnit_1518 NC_014166.1 1517848 1523730 D InterProIPR008638:IPR010069:IPR020557:IPR011050:IPR 012334:IPR008619:IPR006915; KEGG: abu:Abu_0940 adhesin/hemagglutinin; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF637 hemagglutinin putative; SPTR: A8ETC6 Adhesin/haemagglutinin, HecA family; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: haemagglutination activity domain; Possible hemagglutinin (DUF637); TIGRFAM: filamentous haemagglutinin family N-terminal domain; filamentous hemagglutinin family outer membrane protein 1517848..1523730 Arcobacter nitrofigilis DSM 7299 9171677 YP_003655682.1 CDS Arnit_1519 NC_014166.1 1523723 1523923 D KEGG: dhd:Dhaf_0213 membrane protein NosY; SPTR: B6AU87 Trap transporter, 4tm/12tm fusion protein; membrane protein NosY 1523723..1523923 Arcobacter nitrofigilis DSM 7299 9171678 YP_003655683.1 CDS Arnit_1520 NC_014166.1 1524293 1525282 D COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR011251:IPR016048; KEGG: spe:Spro_0498 hypothetical protein; PFAM: Luciferase-like, subgroup; SPTR: C9PGQ1 Putative uncharacterized protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; luciferase family oxidoreductase, group 1 1524293..1525282 Arcobacter nitrofigilis DSM 7299 9171679 YP_003655684.1 CDS Arnit_1521 NC_014166.1 1525346 1525924 R KEGG: lbf:LBF_1431 hypothetical protein; SPTR: B0SQD4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3365); hypothetical protein complement(1525346..1525924) Arcobacter nitrofigilis DSM 7299 9171680 YP_003655685.1 CDS Arnit_1522 NC_014166.1 1526330 1526686 D COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: abu:Abu_0183 LrgA family protein; PFAM: LrgA family protein; SPTR: A8ER86 LrgA family protein; PFAM: LrgA family; LrgB-like family; LrgA family protein 1526330..1526686 Arcobacter nitrofigilis DSM 7299 9171681 YP_003655686.1 CDS Arnit_1523 NC_014166.1 1526676 1527389 D COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300; KEGG: abu:Abu_0184 LrgB-like protein; PFAM: LrgB family protein; SPTR: A8ER87 LrgB-like protein; PFAM: LrgB-like family; TIGRFAM: conserved hypothetical protein TIGR00659; LrgB family protein 1526676..1527389 Arcobacter nitrofigilis DSM 7299 9171682 YP_003655687.1 CDS Arnit_1524 NC_014166.1 1527547 1528668 D COGs: COG0420 DNA repair exonuclease; InterPro IPR004843; KEGG: sun:SUN_0725 DNA double-strand break repair protein; PFAM: metallophosphoesterase; SPTR: B6BJU0 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD; metallophosphoesterase 1527547..1528668 Arcobacter nitrofigilis DSM 7299 9171683 YP_003655688.1 CDS Arnit_1525 NC_014166.1 1528655 1531024 D COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: sun:SUN_0726 DNA double-strand break repair protein; PFAM: SMC domain protein; SPTR: C2A329 RecF/RecN/SMC N-terminal domain-containing protein; PFAM: RecF/RecN/SMC N terminal domain; SMC domain-containing protein 1528655..1531024 Arcobacter nitrofigilis DSM 7299 9171684 YP_003655689.1 CDS Arnit_1526 NC_014166.1 1531100 1531804 D KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein; hypothetical protein 1531100..1531804 Arcobacter nitrofigilis DSM 7299 9171685 YP_003655690.1 CDS Arnit_1527 NC_014166.1 1531801 1531935 D KEGG: cac:CAC1143 exodeoxyribonuclease V, alpha subunit, RecD; SPTR: Q97JX9 Exodeoxyribonuclease V, Alpha subunit, RecD; exodeoxyribonuclease V subunit alpha, RecD 1531801..1531935 Arcobacter nitrofigilis DSM 7299 9171686 YP_003655691.1 CDS Arnit_1528 NC_014166.1 1531932 1532459 D KEGG: pub:SAR11_0551 glycosyl transferase family protein; SPTR: Q4FN67 Glycosyl transferase family; hypothetical protein 1531932..1532459 Arcobacter nitrofigilis DSM 7299 9171687 YP_003655692.1 CDS Arnit_1530 NC_014166.1 1532995 1533189 D KEGG: sun:SUN_0733 hypothetical protein; SPTR: C2A326 Putative uncharacterized protein; hypothetical protein 1532995..1533189 Arcobacter nitrofigilis DSM 7299 9171689 YP_003655693.1 CDS Arnit_1531 NC_014166.1 1533313 1534251 D KEGG: nmu:Nmul_A1741 hypothetical protein; SPTR: Q2Y883 Putative uncharacterized protein; hypothetical protein 1533313..1534251 Arcobacter nitrofigilis DSM 7299 9171690 YP_003655694.1 CDS Arnit_1532 NC_014166.1 1534263 1534649 D KEGG: nmu:Nmul_A1742 hypothetical protein; SPTR: Q2Y882 Putative uncharacterized protein; hypothetical protein 1534263..1534649 Arcobacter nitrofigilis DSM 7299 9171691 YP_003655695.1 CDS Arnit_1533 NC_014166.1 1535623 1535910 D InterPro IPR009241; KEGG: pph:Ppha_0790 protein of unknown function DUF891; PFAM: protein of unknown function DUF891; SPTR: B4SEJ0 Putative uncharacterized protein; PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 1535623..1535910 Arcobacter nitrofigilis DSM 7299 9171692 YP_003655696.1 CDS Arnit_1534 NC_014166.1 1535903 1536178 D InterPro IPR001387:IPR010982; KEGG: cch:Cag_0381 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q3ATM1 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix; XRE family transcriptional regulator 1535903..1536178 Arcobacter nitrofigilis DSM 7299 9171693 YP_003655697.1 CDS Arnit_1535 NC_014166.1 1536228 1536581 D InterPro IPR011067; KEGG: cjj:CJJ81176_pVir0047 hypothetical protein; SPTR: Q8GJA8 Putative uncharacterized protein Cjp47; PFAM: PemK-like protein; hypothetical protein 1536228..1536581 Arcobacter nitrofigilis DSM 7299 9171694 YP_003655698.1 CDS Arnit_1536 NC_014166.1 1536676 1538154 D KEGG: sun:SUN_0733 hypothetical protein; SPTR: A6Q883 Putative uncharacterized protein; PFAM: Domain of unknown function(DUF2779); hypothetical protein 1536676..1538154 Arcobacter nitrofigilis DSM 7299 9171695 YP_003655699.1 CDS Arnit_1537 NC_014166.1 1538235 1539185 D COGs: COG3129 SAM-dependent methyltransferase; InterPro IPR016909:IPR010286; KEGG: ppr:PBPRB0892 putative SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890; PRIAM: rRNA (adenine-N(6)-)-methyltransferase; SPTR: Q1Z2S2 Hypothetical SAM-dependent methyltransferase; PFAM: Protein of unknown function (DUF890); rRNA (adenine-N(6)-)-methyltransferase 1538235..1539185 Arcobacter nitrofigilis DSM 7299 9171696 YP_003655700.1 CDS Arnit_1538 NC_014166.1 1539182 1539763 R COGs: COG2068 Uncharacterized MobA-related protein; KEGG: gfo:GFO_0449 MobA-like molybdenum cofactor biosynthesis protein; SPTR: A3XMJ1 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0007; MobA-like molybdenum cofactor biosynthesis protein complement(1539182..1539763) Arcobacter nitrofigilis DSM 7299 9171697 YP_003655701.1 CDS Arnit_1539 NC_014166.1 1539747 1540640 R COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; KEGG: cyt:cce_3338 putative xanthine dehydrogenase accessory factor; SPTR: A3IX62 Putative uncharacterized protein; PFAM: XdhC and CoxI family; xanthine/CO dehydrogenase maturation factor complement(1539747..1540640) Arcobacter nitrofigilis DSM 7299 9171698 YP_003655702.1 CDS Arnit_1540 NC_014166.1 1540647 1542782 R COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274:IPR012368:IPR000674; KEGG: mmb:Mmol_1774 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; SPTR: C6WXM9 Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein complement(1540647..1542782) Arcobacter nitrofigilis DSM 7299 9171699 YP_003655703.1 CDS Arnit_1541 NC_014166.1 1542784 1543239 R COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR006058:IPR001041:IPR002888; KEGG: dfe:Dfer_3446 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: C6VT11 (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; (2Fe-2S)-binding domain-containing protein complement(1542784..1543239) Arcobacter nitrofigilis DSM 7299 9171700 YP_003655704.1 CDS Arnit_1542 NC_014166.1 1543358 1543966 D COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR009057:IPR012287; KEGG: dal:Dalk_2710 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: B8FKN0 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1543358..1543966 Arcobacter nitrofigilis DSM 7299 9171701 YP_003655705.1 CDS Arnit_1543 NC_014166.1 1544030 1544683 D KEGG: bre:BRE_11 hypothetical protein; SPTR: B6BIL8 Putative uncharacterized protein; hypothetical protein 1544030..1544683 Arcobacter nitrofigilis DSM 7299 9171702 YP_003655706.1 CDS Arnit_1544 NC_014166.1 1544736 1546169 D InterPro IPR010920:IPR006685; KEGG: tdn:Suden_1690 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: B6BHI4 MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel; mechanosensitive ion channel MscS 1544736..1546169 Arcobacter nitrofigilis DSM 7299 9171703 YP_003655707.1 CDS Arnit_1545 NC_014166.1 1546162 1547403 R KEGG: tdn:Suden_0494 hypothetical protein; SPTR: B6BMH0 Putative uncharacterized protein; hypothetical protein complement(1546162..1547403) Arcobacter nitrofigilis DSM 7299 9171704 YP_003655708.1 CDS Arnit_1546 NC_014166.1 1547400 1547633 R InterPro IPR001455; KEGG: gka:GK0755 hypothetical protein; SPTR: Q5L1Z0 Putative uncharacterized protein GK0755; PFAM: SirA-like protein; hypothetical protein complement(1547400..1547633) Arcobacter nitrofigilis DSM 7299 9171705 YP_003655709.1 CDS Arnit_1547 NC_014166.1 1547623 1548063 R InterPro IPR012312; KEGG: wsu:WS1190 hypothetical protein; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: Q7MRM9 Putative uncharacterized protein; PFAM: Hemerythrin HHE cation binding domain; hemerythrin HHE cation binding domain-containing protein complement(1547623..1548063) Arcobacter nitrofigilis DSM 7299 9171706 YP_003655710.1 CDS Arnit_1548 NC_014166.1 1548150 1548788 D COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterProIPR000595:IPR012318:IPR018490:IPR001808:IPR 014710; KEGG: abu:Abu_2145 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: A8EWN6 Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; Crp/Fnr family transcriptional regulator 1548150..1548788 Arcobacter nitrofigilis DSM 7299 9171707 YP_003655711.1 CDS Arnit_1549 NC_014166.1 1548797 1549018 R KEGG: pmx:PERMA_1308 macrophage infection protein, MimD; SPTR: C0QQY3 Macrophage infection protein, MimD; hypothetical protein complement(1548797..1549018) Arcobacter nitrofigilis DSM 7299 9171708 YP_003655712.1 CDS Arnit_1550 NC_014166.1 1549142 1549585 D InterPro IPR001387:IPR010982:IPR010744; KEGG: btr:Btr_2646 hypothetical protein; PFAM: CI repressor; SMART: helix-turn-helix domain protein; SPTR: B0PET7 Putative uncharacterized protein; PFAM: Bacteriophage CI repressor helix-turn-helix domain; CI repressor 1549142..1549585 Arcobacter nitrofigilis DSM 7299 9171709 YP_003655713.1 CDS Arnit_1551 NC_014166.1 1549667 1550701 D COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR016037:IPR016303:IPR002658; KEGG: abu:Abu_1125 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: A8ETW1 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 1549667..1550701 Arcobacter nitrofigilis DSM 7299 9171710 YP_003655714.1 CDS Arnit_1552 NC_014166.1 1550702 1552357 D COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR010920:IPR006685; KEGG: abu:Abu_1126 hypothetical protein; PFAM: MscS Mechanosensitive ion channel; SPTR: A8ETW2 Conserved hypothetical integral membrane protein; PFAM: Mechanosensitive ion channel; mechanosensitive ion channel MscS 1550702..1552357 Arcobacter nitrofigilis DSM 7299 9171711 YP_003655715.1 CDS Arnit_1553 NC_014166.1 1552361 1553626 D COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR006467:IPR000385:IPR013848:IPR 006638:IPR013785:IPR007197; KEGG: abu:Abu_1127 MiaB-like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ETW3 MiaB-like tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; MiaB-like tRNA modifying protein 1552361..1553626 Arcobacter nitrofigilis DSM 7299 9171712 YP_003655716.1 CDS Arnit_1554 NC_014166.1 1553610 1555091 D COGs: COG0465 ATP-dependent Zn protease; InterProIPR003960:IPR003593:IPR011546:IPR003959:IPR 000642; KEGG: abu:Abu_1128 cell division protein FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 FtsH extracellular; peptidase M41; SMART: AAA ATPase; SPTR: A8ETW4 Cell division protein FtsH; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; AAA ATPase 1553610..1555091 Arcobacter nitrofigilis DSM 7299 9171713 YP_003655717.1 CDS Arnit_1555 NC_014166.1 1555081 1555602 D KEGG: abu:Abu_1129 hypothetical protein; SPTR: A8ETW5 Putative uncharacterized protein; hypothetical protein 1555081..1555602 Arcobacter nitrofigilis DSM 7299 9171714 YP_003655718.1 CDS Arnit_1556 NC_014166.1 1555602 1556132 D COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817:IPR008284:IPR001453; KEGG: son:SO_0065 molybdenum cofactor biosynthesis protein; PFAM: molybdopterin binding domain; SPTR: Q8EKM7 Molybdenum cofactor biosynthesis protein Mog; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 1555602..1556132 Arcobacter nitrofigilis DSM 7299 9171715 YP_003655719.1 CDS Arnit_1557 NC_014166.1 1556149 1557483 D COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: tcx:Tcr_0029 sodium/sulphate symporter; PFAM: sodium/sulphate symporter; SPTR: Q31JP7 Divalent anion: sodium symporter (DASS) family transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; anion transporter 1556149..1557483 Arcobacter nitrofigilis DSM 7299 9171716 YP_003655720.1 CDS Arnit_1558 NC_014166.1 1557539 1558270 D InterPro IPR012336:IPR012335; KEGG: abu:Abu_1055 periplasmic protein; SPTR: A8ETP1 Conserved hypothetical periplasmic protein; hypothetical protein 1557539..1558270 Arcobacter nitrofigilis DSM 7299 9171717 YP_003655721.1 CDS Arnit_1559 NC_014166.1 1558274 1560475 D COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR002625:IPR005747:IPR007696:IPR000432; KEGG: abu:Abu_1146 recombination and DNA strand exchange inhibitor protein; PFAM: Smr protein/MutS2; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2; SPTR: A8ETY2 Mismatch repair ATPase; PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; Smr protein/MutS2 1558274..1560475 Arcobacter nitrofigilis DSM 7299 9171718 YP_003655722.1 CDS Arnit_1560 NC_014166.1 1560490 1561308 D COGs: COG3264 Small-conductance mechanosensitive channel; InterProIPR011066:IPR010920:IPR011014:IPR008910:IPR 006685; KEGG: pca:Pcar_0306 small-conductance mechanosensitive channel; PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; SPTR: Q3A7S8 Small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel; Conserved TM helix; mechanosensitive ion channel MscS 1560490..1561308 Arcobacter nitrofigilis DSM 7299 9171719 YP_003655723.1 CDS Arnit_1561 NC_014166.1 1561315 1563957 R InterPro IPR008023; KEGG: abu:Abu_1149 hypothetical protein; PFAM: protein of unknown function DUF748; SPTR: A8ETY5 Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF748); hypothetical protein complement(1561315..1563957) Arcobacter nitrofigilis DSM 7299 9171720 YP_003655724.1 CDS Arnit_1562 NC_014166.1 1564039 1565139 D COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR005941:IPR001261:IPR011650:IPR002933; KEGG: abu:Abu_1150 succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: A8ETY6 Succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade; succinyl-diaminopimelate desuccinylase 1564039..1565139 Arcobacter nitrofigilis DSM 7299 9171721 YP_003655725.1 CDS Arnit_1563 NC_014166.1 1565222 1565722 D InterPro IPR018873; KEGG: gfo:GFO_2160 hypothetical protein; PFAM: KilA-N, DNA-binding domain; SPTR: A0M3D0 Putative uncharacterized protein; PFAM: ORF6N domain; DNA-binding domain-containing protein 1565222..1565722 Arcobacter nitrofigilis DSM 7299 9171722 YP_003655726.1 CDS Arnit_1564 NC_014166.1 1565862 1569683 D KEGG: amr:AM1_D0075 hypothetical protein; SPTR: C5PTJ5 Putative uncharacterized protein; hypothetical protein 1565862..1569683 Arcobacter nitrofigilis DSM 7299 9171723 YP_003655727.1 CDS Arnit_1566 NC_014166.1 1570039 1570518 D KEGG: abu:Abu_1139 hypothetical protein; SPTR: A8ETX5 Putative uncharacterized protein; PFAM: Zeta toxin; hypothetical protein 1570039..1570518 Arcobacter nitrofigilis DSM 7299 9171725 YP_003655728.1 CDS Arnit_1567 NC_014166.1 1570592 1571308 D COGs: COG2859 conserved hypothetical protein; InterPro IPR016907:IPR007497; KEGG: dps:DP0874 hypothetical protein; PFAM: protein of unknown function DUF541; SPTR: Q6APX0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541); hypothetical protein 1570592..1571308 Arcobacter nitrofigilis DSM 7299 9171726 YP_003655729.1 CDS Arnit_1568 NC_014166.1 1571485 1572474 D COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001557:IPR015955:IPR016040:IPR001236; KEGG: ckp:ckrop_1700 putative lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: C6PQN3 Lactate/malate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; lactate/malate dehydrogenase 1571485..1572474 Arcobacter nitrofigilis DSM 7299 9171727 YP_003655730.1 CDS Arnit_1569 NC_014166.1 1572492 1573844 R COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: abu:Abu_1048 putative sodium:sulfate symporter; PFAM: sodium/sulphate symporter; SPTR: A8ETN4 Putative sodium:sulfate symporter; PFAM: Sodium:sulfate symporter transmembrane region; sodium/sulfate symporter complement(1572492..1573844) Arcobacter nitrofigilis DSM 7299 9171728 YP_003655731.1 CDS Arnit_1570 NC_014166.1 1574031 1574660 D KEGG: abu:Abu_1043 hypothetical protein; SPTR: A8ETM9 Putative uncharacterized protein; hypothetical protein 1574031..1574660 Arcobacter nitrofigilis DSM 7299 9171729 YP_003655732.1 CDS Arnit_1571 NC_014166.1 1574691 1575368 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1868 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EVY3 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 1574691..1575368 Arcobacter nitrofigilis DSM 7299 9171730 YP_003655733.1 CDS Arnit_1572 NC_014166.1 1575400 1576989 D COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: wsu:WS1435 putative periplasmic binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Q7M8T0 PUTATIVE PERIPLASMIC BINDING PROTEIN; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; family 5 extracellular solute-binding protein 1575400..1576989 Arcobacter nitrofigilis DSM 7299 9171731 YP_003655734.1 CDS Arnit_1573 NC_014166.1 1576982 1578634 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR005467:IPR003594:IPR009082; KEGG: wsu:WS1436 putative two-component sensor; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q7M8S9 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 1576982..1578634 Arcobacter nitrofigilis DSM 7299 9171732 YP_003655735.1 CDS Arnit_1574 NC_014166.1 1578719 1579306 D InterPro IPR009056; KEGG: abu:Abu_1142 cytochrome c-type protein TorC; SPTR: A8ETX8 Cytochrome c-type protein TorC; cytochrome c-type protein TorC 1578719..1579306 Arcobacter nitrofigilis DSM 7299 9171733 YP_003655736.1 CDS Arnit_1575 NC_014166.1 1579308 1581791 D COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006658:IPR006655:IPR009010:IPR006656:IPR 006657; KEGG: abu:Abu_1143 biotin sulfoxide reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: A8ETX9 Biotin sulfoxide reductase; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; molybdopterin guanine dinucleotide-containing S/N-oxide reductase 1579308..1581791 Arcobacter nitrofigilis DSM 7299 9171734 YP_003655737.1 CDS Arnit_1576 NC_014166.1 1581888 1582331 D InterPro IPR011256:IPR010499; KEGG: abu:Abu_1141 hypothetical protein; PFAM: transcription activator effector binding; SPTR: A8ETX7 Putative uncharacterized protein; PFAM: Bacterial transcription activator, effector binding domain; transcription activator effector binding protein 1581888..1582331 Arcobacter nitrofigilis DSM 7299 9171735 YP_003655738.1 CDS Arnit_1577 NC_014166.1 1582428 1583795 D COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: tdn:Suden_0421 transporter, putative; PFAM: Citrate transporter; SPTR: Q30TH9 Transporter, putative; PFAM: Citrate transporter; citrate transporter 1582428..1583795 Arcobacter nitrofigilis DSM 7299 9171736 YP_003655739.1 CDS Arnit_1578 NC_014166.1 1583825 1584766 R KEGG: dps:DP1377 hypothetical protein; SPTR: Q6ANG8 Putative uncharacterized protein; hypothetical protein complement(1583825..1584766) Arcobacter nitrofigilis DSM 7299 9171737 YP_003655740.1 CDS Arnit_1579 NC_014166.1 1584862 1585554 D COGs: COG1794 Aspartate racemase; InterPro IPR004380:IPR001920:IPR015942; KEGG: pin:Ping_2098 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: A1SWI1 Aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; aspartate racemase 1584862..1585554 Arcobacter nitrofigilis DSM 7299 9171738 YP_003655741.1 CDS Arnit_1580 NC_014166.1 1585567 1586220 D COGs: COG2258 conserved hypothetical protein; InterPro IPR005302:IPR011037:IPR015808; KEGG: abu:Abu_1469 hypothetical protein; PFAM: MOSC domain containing protein; SPTR: A8EUV0 Putative uncharacterized protein; PFAM: MOSC domain; MOSC domain-containing protein 1585567..1586220 Arcobacter nitrofigilis DSM 7299 9171739 YP_003655742.1 CDS Arnit_1581 NC_014166.1 1586228 1586458 R KEGG: hypothetical protein; SPTR: A0D458 Chromosome undetermined scaffold_37, whole genome shotgun sequence; hypothetical protein complement(1586228..1586458) Arcobacter nitrofigilis DSM 7299 9171740 YP_003655743.1 CDS Arnit_1582 NC_014166.1 1586500 1587654 R KEGG: hau:Haur_0207 hypothetical protein; SPTR: A4CCV2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3095); hypothetical protein complement(1586500..1587654) Arcobacter nitrofigilis DSM 7299 9171741 YP_003655744.1 CDS Arnit_1583 NC_014166.1 1587660 1588031 R COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abu:Abu_1057 hypothetical protein; PFAM: helix-turn-helix HxlR type; SPTR: A8ETP3 Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix; HxlR family transcriptional regulator complement(1587660..1588031) Arcobacter nitrofigilis DSM 7299 9171742 YP_003655745.1 CDS Arnit_1584 NC_014166.1 1588155 1589135 D InterPro IPR000620; KEGG: abu:Abu_1061 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8ETP7 Conserved hypothetical integral membrane protein (DUF6 domain protein); PFAM: EamA-like transporter family; hypothetical protein 1588155..1589135 Arcobacter nitrofigilis DSM 7299 9171743 YP_003655746.1 CDS Arnit_1585 NC_014166.1 1589132 1589713 D COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: abu:Abu_1058 flavodoxin-like fold domain-containing protein; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: A8ETP4 Flavodoxin-like fold domain protein, putative NADPH-quinone reductase; PFAM: Flavodoxin-like fold; NAD(P)H dehydrogenase 1589132..1589713 Arcobacter nitrofigilis DSM 7299 9171744 YP_003655747.1 CDS Arnit_1586 NC_014166.1 1589729 1590478 D COGs: COG0778 Nitroreductase; InterPro IPR000415:IPR016446; KEGG: lba:Lebu_0572 nitroreductase; PFAM: nitroreductase; SPTR: C2A2D6 Nitroreductase; PFAM: Nitroreductase family; nitroreductase 1589729..1590478 Arcobacter nitrofigilis DSM 7299 9171745 YP_003655748.1 CDS Arnit_1587 NC_014166.1 1590491 1591510 D COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR002364:IPR011032:IPR016040:IPR013154:IPR 013149; KEGG: cak:Caul_0434 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: B0T5L3 Alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 1590491..1591510 Arcobacter nitrofigilis DSM 7299 9171746 YP_003655749.1 CDS Arnit_1588 NC_014166.1 1591558 1591854 D COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: abu:Abu_1059 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: A8ETP5 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1591558..1591854 Arcobacter nitrofigilis DSM 7299 9171747 YP_003655750.1 CDS Arnit_1589 NC_014166.1 1591856 1592158 D InterPro IPR011008; KEGG: cbt:CLH_1473 antibiotic biosynthesis monooxygenase; SPTR: B2V0H3 Antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; hypothetical protein 1591856..1592158 Arcobacter nitrofigilis DSM 7299 9171748 YP_003655751.1 CDS Arnit_1590 NC_014166.1 1592177 1593205 D COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR013785:IPR001155; KEGG: abu:Abu_1060 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: A8ETP6 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase 1592177..1593205 Arcobacter nitrofigilis DSM 7299 9171749 YP_003655752.1 CDS Arnit_1591 NC_014166.1 1593205 1594128 D InterPro IPR000620; KEGG: abu:Abu_1061 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8ETP7 Conserved hypothetical integral membrane protein (DUF6 domain protein); PFAM: EamA-like transporter family; hypothetical protein 1593205..1594128 Arcobacter nitrofigilis DSM 7299 9171750 YP_003655753.1 CDS Arnit_1592 NC_014166.1 1594125 1594697 D COGs: COG3545 esterase of the alpha/beta hydrolase fold; InterPro IPR010662; KEGG: bsu:BSU05260 alpha/beta hydrolase; PFAM: protein of unknown function DUF1234; SPTR: P96671 Putative hydrolase ydeN; PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234); hypothetical protein 1594125..1594697 Arcobacter nitrofigilis DSM 7299 9171751 YP_003655754.1 CDS Arnit_1593 NC_014166.1 1594727 1595860 D COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family; InterPro IPR018211:IPR001670; KEGG: hch:HCH_03787 oxidoreductase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Q2SFQ5 Uncharacterized oxidoreductase, Fe-dependent alcohol dehydrogenase family; PFAM: Iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1594727..1595860 Arcobacter nitrofigilis DSM 7299 9171752 YP_003655755.1 CDS Arnit_1594 NC_014166.1 1595872 1596501 D COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: abu:Abu_1062 NAD(P)H-flavin nitroreductase; PFAM: nitroreductase; SPTR: A8ETP8 NAD(P)H-flavin nitroreductase; PFAM: Nitroreductase family; nitroreductase 1595872..1596501 Arcobacter nitrofigilis DSM 7299 9171753 YP_003655756.1 CDS Arnit_1595 NC_014166.1 1596603 1599260 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013587; KEGG: abu:Abu_1930 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EW29 Methyl-accepting chemotaxis protein; PFAM: Nitrate and nitrite sensing; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; methyl-accepting chemotaxis sensory transducer 1596603..1599260 Arcobacter nitrofigilis DSM 7299 9171754 YP_003655757.1 CDS Arnit_1596 NC_014166.1 1599275 1599466 D KEGG: abu:Abu_0244 hypothetical protein; SPTR: A8ERE5 Putative uncharacterized protein; hypothetical protein 1599275..1599466 Arcobacter nitrofigilis DSM 7299 9171755 YP_003655758.1 CDS Arnit_1597 NC_014166.1 1599463 1600386 R COGs: COG0679 permease; InterPro IPR004776; KEGG: cps:CPS_0767 auxin efflux carrier family protein; PFAM: Auxin Efflux Carrier; SPTR: Q488J8 Auxin efflux carrier family protein; PFAM: Membrane transport protein; auxin efflux carrier complement(1599463..1600386) Arcobacter nitrofigilis DSM 7299 9171756 YP_003655759.1 CDS Arnit_1598 NC_014166.1 1600572 1602044 D COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; InterPro IPR003720:IPR001763:IPR004114:IPR020536; KEGG: abu:Abu_1419 thiamine biosynthesis protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain protein; SPTR: A8EUQ0 Thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein (ThiI); Rhodanese-like domain; THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI; thiamine biosynthesis/tRNA modification protein ThiI 1600572..1602044 Arcobacter nitrofigilis DSM 7299 9171757 YP_003655760.1 CDS Arnit_1599 NC_014166.1 1602152 1603648 D KEGG: abu:Abu_1063 hypothetical protein; SPTR: A8ETP9 Putative uncharacterized protein; hypothetical protein 1602152..1603648 Arcobacter nitrofigilis DSM 7299 9171758 YP_003655761.1 CDS Arnit_1600 NC_014166.1 1603720 1605306 D COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: abu:Abu_1064 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETQ0 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 1603720..1605306 Arcobacter nitrofigilis DSM 7299 9171759 YP_003655762.1 CDS Arnit_1601 NC_014166.1 1605407 1610347 D COGs: COG3899 ATPase; InterProIPR000160:IPR000719:IPR011009:IPR002290:IPR 020635:IPR003018:IPR017442; KEGG: ana:all2282 serine/threonine kinase protein; PFAM: GGDEF domain containing protein; Serine/threonine-protein kinase-like domain; GAF domain protein; SMART: GGDEF domain containing protein; serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; GAF domain protein; SPTR: Q8YUQ3 Sensor protein; TIGRFAM: diguanylate cyclase; PFAM: Protein kinase domain; GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; serine/threonine protein kinase 1605407..1610347 Arcobacter nitrofigilis DSM 7299 9171760 YP_003655763.1 CDS Arnit_1602 NC_014166.1 1610445 1611833 D KEGG: kko:Kkor_1969 hypothetical protein; SPTR: C7R6F1 Putative uncharacterized protein; hypothetical protein 1610445..1611833 Arcobacter nitrofigilis DSM 7299 9171761 YP_003655764.1 CDS Arnit_1603 NC_014166.1 1611870 1612355 R COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: abu:Abu_1065 acyl-CoA thioester hydrolase family protein; PFAM: thioesterase superfamily protein; SPTR: A8ETQ1 Acyl-CoA thioester hydrolase family protein; PFAM: Thioesterase superfamily; thioesterase superfamily protein complement(1611870..1612355) Arcobacter nitrofigilis DSM 7299 9171762 YP_003655765.1 CDS Arnit_1604 NC_014166.1 1612477 1614423 R COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterProIPR001679:IPR018239:IPR001357:IPR010994:IPR 016027:IPR013840:IPR003583:IPR012340:IPR013839:IPR004150; KEGG: abu:Abu_1067 NAD-dependent DNA ligase LigA; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; SPTR: A8ETQ3 DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; DNA ligase, NAD-dependent; NAD-dependent DNA ligase complement(1612477..1614423) Arcobacter nitrofigilis DSM 7299 9171763 YP_003655766.1 CDS Arnit_1605 NC_014166.1 1614434 1615138 R InterPro IPR013216; KEGG: avn:Avin_39860 methylase; PFAM: Methyltransferase type 11; SPTR: Q0EXI3 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; PFAM: Methyltransferase domain; type 11 methyltransferase complement(1614434..1615138) Arcobacter nitrofigilis DSM 7299 9171764 YP_003655767.1 CDS Arnit_1606 NC_014166.1 1615201 1615542 D KEGG: conserved hypothetical protein; SPTR: Q8IKV4 Aminomethyltransferase, putative; hypothetical protein 1615201..1615542 Arcobacter nitrofigilis DSM 7299 9171765 YP_003655768.1 CDS Arnit_1607 NC_014166.1 1615747 1616595 D InterPro IPR014729:IPR006016; KEGG: cco:CCC13826_0487 ribosomal protein S1; PFAM: UspA domain protein; SPTR: B9D359 Universal stress protein family; PFAM: Universal stress protein family; UspA domain-containing protein 1615747..1616595 Arcobacter nitrofigilis DSM 7299 9171767 YP_003655769.1 CDS Arnit_1608 NC_014166.1 1616615 1617274 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: dtu:Dtur_0537 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B8DZ94 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 1616615..1617274 Arcobacter nitrofigilis DSM 7299 9171768 YP_003655770.1 CDS Arnit_1609 NC_014166.1 1617274 1618641 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR005467:IPR003594:IPR009082:IPR 013727:IPR003660:IPR003661; KEGG: bxe:Bxe_B1046 periplasmic sensor signal transduction histidine kinase, TctE; PFAM: ATP-binding region ATPase domain protein; Two-component sensor kinase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q13LY1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two-component sensor kinase N-terminal; integral membrane sensor signal transduction histidine kinase 1617274..1618641 Arcobacter nitrofigilis DSM 7299 9171769 YP_003655771.1 CDS Arnit_1610 NC_014166.1 1618666 1619664 R COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: pol:Bpro_4422 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: D0DCC6 Twin-arginine translocation pathway signal; PFAM: Tripartite tricarboxylate transporter family receptor; hypothetical protein complement(1618666..1619664) Arcobacter nitrofigilis DSM 7299 9171770 YP_003655772.1 CDS Arnit_1611 NC_014166.1 1619808 1621310 R COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: efe:EFER_0273 hypothetical protein; PFAM: protein of unknown function DUF112 transmembrane; SPTR: A3U0A7 Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctA family; hypothetical protein complement(1619808..1621310) Arcobacter nitrofigilis DSM 7299 9171771 YP_003655773.1 CDS Arnit_1612 NC_014166.1 1621319 1621759 R KEGG: dth:DICTH_0028 hypothetical protein; SPTR: A3U0A8 Putative uncharacterized protein; hypothetical protein complement(1621319..1621759) Arcobacter nitrofigilis DSM 7299 9171772 YP_003655774.1 CDS Arnit_1613 NC_014166.1 1621769 1622767 R COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: mmw:Mmwyl1_3931 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: D0DCC6 Twin-arginine translocation pathway signal; PFAM: Tripartite tricarboxylate transporter family receptor; hypothetical protein complement(1621769..1622767) Arcobacter nitrofigilis DSM 7299 9171773 YP_003655775.1 CDS Arnit_1614 NC_014166.1 1623063 1623440 D COGs: COG3439 conserved hypothetical protein; InterPro IPR005180:IPR016796; KEGG: abu:Abu_1485 hypothetical protein; PFAM: protein of unknown function DUF302; SPTR: A8EUW6 Putative uncharacterized protein; PFAM: Domain of unknown function DUF302; hypothetical protein 1623063..1623440 Arcobacter nitrofigilis DSM 7299 9171774 YP_003655776.1 CDS Arnit_1615 NC_014166.1 1623454 1624734 R COGs: COG2195 Di- and tripeptidase; InterPro IPR001160; KEGG: abu:Abu_1305 aminoacyl-histidine dipeptidase PepD; PRIAM: Xaa-His dipeptidase; SPTR: A8EUD8 Aminoacyl-histidine dipeptidase PepD; PFAM: Peptidase family M20/M25/M40; TIGRFAM: aminoacyl-histidine dipeptidase; Xaa-His dipeptidase complement(1623454..1624734) Arcobacter nitrofigilis DSM 7299 9171775 YP_003655777.1 CDS Arnit_1616 NC_014166.1 1624835 1626643 D COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR003660:IPR003607:IPR004010:IPR006674; KEGG: dsa:Desal_2677 cache sensor hybrid histidine kinase; PFAM: metal-dependent phosphohydrolase HD sub domain; Cache domain protein; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; SPTR: A6FBR1 Response regulator; PFAM: HD domain; HAMP domain; Cache domain; metal dependent phosphohydrolase 1624835..1626643 Arcobacter nitrofigilis DSM 7299 9171776 YP_003655778.1 CDS Arnit_1617 NC_014166.1 1626640 1629456 R COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: abu:Abu_1304 cytochrome c biogenesis protein; PFAM: cytochrome c assembly protein; SPTR: A8EUD7 Cytochrome c biogenesis protein; PFAM: Cytochrome C assembly protein; ResB-like family; TIGRFAM: cytochrome c-type biogenesis protein CcsB; cytochrome c assembly protein complement(1626640..1629456) Arcobacter nitrofigilis DSM 7299 9171777 YP_003655779.1 CDS Arnit_1618 NC_014166.1 1629594 1630514 D InterPro IPR010017; KEGG: abu:Abu_1302 hypothetical protein; PFAM: methyltransferase putative; SPTR: A8EUD5 tRNA (mo5U34)-methyltransferase; PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative; methyltransferase 1629594..1630514 Arcobacter nitrofigilis DSM 7299 9171778 YP_003655780.1 CDS Arnit_1619 NC_014166.1 1630511 1631479 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_1301 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8EUD4 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1630511..1631479) Arcobacter nitrofigilis DSM 7299 9171779 YP_003655781.1 CDS Arnit_1620 NC_014166.1 1631559 1632152 R COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: abu:Abu_1299 beta-lactamase-like protein; SPTR: A8EUD2 Beta-lactamase-like protein; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase-like protein complement(1631559..1632152) Arcobacter nitrofigilis DSM 7299 9171780 YP_003655782.1 CDS Arnit_1621 NC_014166.1 1632211 1633032 D COGs: COG2833 conserved hypothetical protein; InterPro IPR011197:IPR007402; KEGG: abu:Abu_1298 hypothetical protein; PFAM: protein of unknown function DUF455; SPTR: A8EUD1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF455); hypothetical protein 1632211..1633032 Arcobacter nitrofigilis DSM 7299 9171781 YP_003655783.1 CDS Arnit_1622 NC_014166.1 1633117 1633308 D KEGG: hypothetical protein; SPTR: B7ADH7 Putative uncharacterized protein; hypothetical protein 1633117..1633308 Arcobacter nitrofigilis DSM 7299 9171782 YP_003655784.1 CDS Arnit_1623 NC_014166.1 1633311 1634375 R COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: abu:Abu_0830 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; SPTR: A8ET21 EAL domain protein; PFAM: EAL domain; diguanylate phosphodiesterase complement(1633311..1634375) Arcobacter nitrofigilis DSM 7299 9171783 YP_003655785.1 CDS Arnit_1624 NC_014166.1 1634386 1635027 R COGs: COG0259 Pyridoxamine-phosphate oxidase; InterProIPR000659:IPR019740:IPR009002:IPR012349:IPR 011576:IPR019576; KEGG: abu:Abu_1541 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: A8EV17 Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; pyridoxamine 5'-phosphate oxidase complement(1634386..1635027) Arcobacter nitrofigilis DSM 7299 9171784 YP_003655786.1 CDS Arnit_1625 NC_014166.1 1635037 1635570 R KEGG: abu:Abu_1203 hypothetical protein; SPTR: A8EU39 Putative uncharacterized protein; hypothetical protein complement(1635037..1635570) Arcobacter nitrofigilis DSM 7299 9171785 YP_003655787.1 CDS Arnit_1626 NC_014166.1 1635567 1636793 R COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: abu:Abu_1204 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: A8EU40 Cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(1635567..1636793) Arcobacter nitrofigilis DSM 7299 9171786 YP_003655788.1 CDS Arnit_1627 NC_014166.1 1636793 1637536 R COGs: COG3496 conserved hypothetical protein; InterPro IPR010775; KEGG: abu:Abu_1205 hypothetical protein; PFAM: protein of unknown function DUF1365; SPTR: A8EU41 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1365); hypothetical protein complement(1636793..1637536) Arcobacter nitrofigilis DSM 7299 9171787 YP_003655789.1 CDS Arnit_1628 NC_014166.1 1637533 1638768 R COGs: COG2907 NAD/FAD-binding protein; InterPro IPR006076; KEGG: abu:Abu_1206 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: A8EU42 Putative uncharacterized protein; PFAM: Flavin containing amine oxidoreductase; FAD dependent oxidoreductase complement(1637533..1638768) Arcobacter nitrofigilis DSM 7299 9171788 YP_003655790.1 CDS Arnit_1629 NC_014166.1 1638778 1639275 R COGs: COG3040 Bacterial lipocalin; InterPro IPR002446:IPR011038:IPR012674:IPR013208; KEGG: abu:Abu_1207 lipoprotein; PFAM: Lipocalin family protein; SPTR: A8EU43 Conserved hypothetical lipoprotein; PFAM: Lipocalin-like domain; lipocalin family protein complement(1638778..1639275) Arcobacter nitrofigilis DSM 7299 9171789 YP_003655791.1 CDS Arnit_1630 NC_014166.1 1639356 1640600 R COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR016196:IPR011701; KEGG: abu:Abu_1208 sugar transporter, putative; PFAM: major facilitator superfamily MFS_1; SPTR: A8EU44 Sugar transporter, putative; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(1639356..1640600) Arcobacter nitrofigilis DSM 7299 9171790 YP_003655792.1 CDS Arnit_1631 NC_014166.1 1640597 1641031 R KEGG: ctt:CtCNB1_1919 hypothetical protein; SPTR: B6QZH3 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2358); hypothetical protein complement(1640597..1641031) Arcobacter nitrofigilis DSM 7299 9171791 YP_003655793.1 CDS Arnit_1632 NC_014166.1 1641028 1641780 R COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198:IPR002347:IPR016040; KEGG: abu:Abu_1209 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8EU45 Oxidoreductase, short chain dehydrogenase/reductase family; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1641028..1641780) Arcobacter nitrofigilis DSM 7299 9171792 YP_003655794.1 CDS Arnit_1633 NC_014166.1 1641853 1643067 R COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR006654:IPR006653:IPR001926; KEGG: abu:Abu_1295 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8EUC8 Tryptophan synthase, beta chain; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta complement(1641853..1643067) Arcobacter nitrofigilis DSM 7299 9171793 YP_003655795.1 CDS Arnit_1634 NC_014166.1 1643132 1645765 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR004358:IPR005467:IPR003594:IPR 009082:IPR001638; KEGG: abu:Abu_1360 two-component sensor histidine kinase; PFAM: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; SPTR: A8EUJ2 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; PAS/PAC sensor signal transduction histidine kinase complement(1643132..1645765) Arcobacter nitrofigilis DSM 7299 9171794 YP_003655796.1 CDS Arnit_1635 NC_014166.1 1645878 1647002 R COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR012724:IPR018253:IPR003095:IPR001623:IPR 001305:IPR008971:IPR002939; KEGG: abu:Abu_1294 co-chaperone and heat shock protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8EUC7 Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; chaperone protein DnaJ complement(1645878..1647002) Arcobacter nitrofigilis DSM 7299 9171795 YP_003655797.1 CDS Arnit_1636 NC_014166.1 1647079 1647651 D COGs: COG0353 Recombinational DNA repair protein (RecF pathway); InterPro IPR000093:IPR015967; KEGG: abu:Abu_1293 recombination protein RecR; PFAM: Zinc finger C4-type, RecR; SPTR: A8EUC6 Recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: RecR protein; TIGRFAM: recombination protein RecR; recombination protein RecR 1647079..1647651 Arcobacter nitrofigilis DSM 7299 9171796 YP_003655798.1 CDS Arnit_1637 NC_014166.1 1647653 1647829 D KEGG: afl:Aflv_2769 uncharacterized protein contains CXXC motif; SPTR: B7GMM0 Uncharacterized protein contains CXXC motif; hypothetical protein 1647653..1647829 Arcobacter nitrofigilis DSM 7299 9171797 YP_003655799.1 CDS Arnit_1638 NC_014166.1 1647839 1649287 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR005467:IPR003594:IPR009082:IPR 003661; KEGG: nam:NAMH_0746 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A6DBS2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 1647839..1649287 Arcobacter nitrofigilis DSM 7299 9171798 YP_003655800.1 CDS Arnit_1639 NC_014166.1 1649297 1650217 D InterPro IPR014871; KEGG: abu:Abu_1292 deoxyuridinetriphosphatase; PFAM: dUTPase; SPTR: A8EUC5 Deoxyuridinetriphosphatase; PFAM: dUTPase; dUTPase 1649297..1650217 Arcobacter nitrofigilis DSM 7299 9171799 YP_003655801.1 CDS Arnit_1640 NC_014166.1 1650253 1650942 D COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR003016:IPR011606; KEGG: pin:Ping_3724 AzlC family protein; PFAM: AzlC family protein; SPTR: C3RLA2 Putative uncharacterized protein; PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; AzlC family protein 1650253..1650942 Arcobacter nitrofigilis DSM 7299 9171800 YP_003655802.1 CDS Arnit_1641 NC_014166.1 1650932 1651258 D COGs: COG1687 branched-chain amino acid permease (azaleucine resistance); InterPro IPR008407; KEGG: mba:Mbar_A2617 branched chain amino acid transport protein AzlD; PFAM: branched-chain amino acid transport; SPTR: Q469B6 Branched chain amino acid transport protein AzlD; PFAM: Branched-chain amino acid transport protein (AzlD); branched-chain amino acid transport 1650932..1651258 Arcobacter nitrofigilis DSM 7299 9171801 YP_003655803.1 CDS Arnit_1642 NC_014166.1 1651255 1652487 R COGs: COG2848 conserved hypothetical protein; InterPro IPR007841; KEGG: ctt:CtCNB1_4537 hypothetical protein; PFAM: protein of unknown function DUF711; SPTR: A7JPS3 Putative uncharacterized protein; PFAM: Uncharacterized ACR (DUF711); hypothetical protein complement(1651255..1652487) Arcobacter nitrofigilis DSM 7299 9171802 YP_003655804.1 CDS Arnit_1643 NC_014166.1 1652487 1653053 R InterPro IPR016181; KEGG: sun:SUN_0924 acetyltransferase; SPTR: A6Q8S3 Acetyltransferase, GNAT family; acetyltransferase complement(1652487..1653053) Arcobacter nitrofigilis DSM 7299 9171803 YP_003655805.1 CDS Arnit_1644 NC_014166.1 1653119 1653712 R COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR018490:IPR014710:IPR000595; KEGG: hau:Haur_2655 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SPTR: A3YEP1 Catabolite gene activator protein; PFAM: Cyclic nucleotide-binding domain; putative Crp/Fnr family transcriptional regulator complement(1653119..1653712) Arcobacter nitrofigilis DSM 7299 9171804 YP_003655806.1 CDS Arnit_1645 NC_014166.1 1653699 1654199 R COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR011004:IPR001451; KEGG: abu:Abu_1285 hypothetical protein; SPTR: A8EUB8 Putative uncharacterized protein; hypothetical protein complement(1653699..1654199) Arcobacter nitrofigilis DSM 7299 9171805 YP_003655807.1 CDS Arnit_1646 NC_014166.1 1654263 1656851 R COGs: COG2866 carboxypeptidase; InterPro IPR000834:IPR003961:IPR008957; KEGG: nis:NIS_0893 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: B6BMD1 Peptidase M14, carboxypeptidase A; PFAM: Zinc carboxypeptidase; peptidase M14 carboxypeptidase A complement(1654263..1656851) Arcobacter nitrofigilis DSM 7299 9171806 YP_003655808.1 CDS Arnit_1647 NC_014166.1 1656855 1658354 R COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR010994:IPR003583:IPR013651; KEGG: nis:NIS_0892 hypothetical protein; PFAM: RimK domain protein ATP-grasp; SPTR: A6Q3E5 Putative uncharacterized protein; PFAM: RimK-like ATP-grasp domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; RimK domain-containing protein ATP-grasp complement(1656855..1658354) Arcobacter nitrofigilis DSM 7299 9171807 YP_003655809.1 CDS Arnit_1648 NC_014166.1 1658351 1659265 R COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761:IPR013816:IPR013651; KEGG: sun:SUN_1052 hypothetical protein; PFAM: RimK domain protein ATP-grasp; SPTR: A6Q950 Putative uncharacterized protein; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; RimK domain-containing protein ATP-grasp complement(1658351..1659265) Arcobacter nitrofigilis DSM 7299 9171808 YP_003655810.1 CDS Arnit_1649 NC_014166.1 1659276 1660370 R COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261:IPR011650:IPR017150:IPR002933; KEGG: sun:SUN_1051 carboxypeptidase G2; PFAM: peptidase dimerisation domain protein; peptidase M20; SPTR: B6BMC9 Peptidase dimerisation domain protein; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; peptidase dimerization domain-containing protein complement(1659276..1660370) Arcobacter nitrofigilis DSM 7299 9171809 YP_003655811.1 CDS Arnit_1650 NC_014166.1 1660510 1661754 R COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518:IPR018223:IPR014729; KEGG: abu:Abu_1279 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: A8EUB2 Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase complement(1660510..1661754) Arcobacter nitrofigilis DSM 7299 9171810 YP_003655812.1 CDS Arnit_1651 NC_014166.1 1661822 1662085 D COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: abu:Abu_1278 S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: A8EUB1 S4 domain protein; PFAM: S4 domain; RNA-binding S4 domain-containing protein 1661822..1662085 Arcobacter nitrofigilis DSM 7299 9171811 YP_003655813.1 CDS Arnit_1652 NC_014166.1 1662078 1663061 D COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR005940:IPR000312; KEGG: abu:Abu_1276 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: A8EUA9 Anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 1662078..1663061 Arcobacter nitrofigilis DSM 7299 9171812 YP_003655814.1 CDS Arnit_1653 NC_014166.1 1663069 1663488 D COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: abu:Abu_1275 hypothetical protein; PFAM: protein of unknown function UPF0079; SPTR: A8EUA8 Putative uncharacterized protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein; hypothetical protein 1663069..1663488 Arcobacter nitrofigilis DSM 7299 9171813 YP_003655815.1 CDS Arnit_1654 NC_014166.1 1663481 1664203 D COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: abu:Abu_1274 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8EUA7 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 1663481..1664203 Arcobacter nitrofigilis DSM 7299 9171814 YP_003655816.1 CDS Arnit_1655 NC_014166.1 1664200 1665450 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR000160:IPR001789:IPR011006; KEGG: afl:Aflv_1936 response regulator with a diguanylate cyclase output domain; PFAM: response regulator receiver; GGDEF domain containing protein; SMART: response regulator receiver; GGDEF domain containing protein; SPTR: B6BN46 Response regulator PleD; TIGRFAM: diguanylate cyclase; PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator receiver protein complement(1664200..1665450) Arcobacter nitrofigilis DSM 7299 9171815 YP_003655817.1 CDS Arnit_1656 NC_014166.1 1665459 1666184 R COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR004528:IPR003329; KEGG: abu:Abu_1272 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: A8EUA5 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(1665459..1666184) Arcobacter nitrofigilis DSM 7299 9171816 YP_003655818.1 CDS Arnit_1657 NC_014166.1 1666197 1667600 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR004358:IPR005467:IPR000700:IPR 003594:IPR009082:IPR001610:IPR013767:IPR013655; KEGG: tdn:Suden_0986 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Q30RW7 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor signal transduction histidine kinase complement(1666197..1667600) Arcobacter nitrofigilis DSM 7299 9171817 YP_003655819.1 CDS Arnit_1658 NC_014166.1 1667673 1670375 D COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR018320:IPR019760:IPR002298:IPR012337:IPR 020045:IPR002421:IPR008918:IPR002562:IPR001098:IPR020046:I PR020047; KEGG: abu:Abu_1270 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; PRIAM: DNA-directed DNA polymerase; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; SPTR: A8EUA3 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I; DNA polymerase I 1667673..1670375 Arcobacter nitrofigilis DSM 7299 9171818 YP_003655820.1 CDS Arnit_1659 NC_014166.1 1670471 1671181 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1269 two-component response regulator; PFAM: response regulator receiver; SPTR: A8EUA2 Two-component response regulator; PFAM: Response regulator receiver domain; response regulator receiver protein 1670471..1671181 Arcobacter nitrofigilis DSM 7299 9171819 YP_003655821.1 CDS Arnit_1660 NC_014166.1 1671200 1671391 D KEGG: abu:Abu_1268 hypothetical protein; SPTR: A8EUA1 Putative uncharacterized protein; hypothetical protein 1671200..1671391 Arcobacter nitrofigilis DSM 7299 9171820 YP_003655822.1 CDS Arnit_1661 NC_014166.1 1671391 1671645 D KEGG: abu:Abu_0122 hypothetical protein; SPTR: A8ER33 Putative uncharacterized protein; PFAM: Uncharacterized protein containing a Zn-ribbon (DUF2116); hypothetical protein 1671391..1671645 Arcobacter nitrofigilis DSM 7299 9171821 YP_003655823.1 CDS Arnit_1662 NC_014166.1 1671629 1672942 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR001789:IPR000700:IPR011006:IPR 001610:IPR013767; KEGG: tdn:Suden_0281 multi-sensor signal transduction histidine kinase; PFAM: response regulator receiver; PAS fold domain protein; SMART: response regulator receiver; PAC repeat-containing protein; SPTR: A8V332 DIGUANYLATE CYCLASE; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; putative PAS/PAC sensor protein 1671629..1672942 Arcobacter nitrofigilis DSM 7299 9171822 YP_003655824.1 CDS Arnit_1663 NC_014166.1 1672939 1673751 R COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: abu:Abu_1267 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: A8EUA0 Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(1672939..1673751) Arcobacter nitrofigilis DSM 7299 9171823 YP_003655825.1 CDS Arnit_1664 NC_014166.1 1673751 1675049 R COGs: COG0247 Fe-S oxidoreductase; InterProIPR017900:IPR017896:IPR009051:IPR012257:IPR 012285:IPR001450:IPR004017; KEGG: abu:Abu_1266 anaerobic glycerol-3-phosphate dehydrogenase, subunit C (GlpC); PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EU99 Anaerobic glycerol-3-phosphate dehydrogenase, subunit C (GlpC); PFAM: Cysteine-rich domain; hypothetical protein complement(1673751..1675049) Arcobacter nitrofigilis DSM 7299 9171824 YP_003655826.1 CDS Arnit_1665 NC_014166.1 1675049 1676416 R COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterProIPR004558:IPR006638:IPR013785:IPR007197:IPR 010723; KEGG: abu:Abu_1245 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EU78 Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase complement(1675049..1676416) Arcobacter nitrofigilis DSM 7299 9171825 YP_003655827.1 CDS Arnit_1666 NC_014166.1 1676409 1677335 R COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR002292:IPR006130:IPR006132:IPR006131; KEGG: abu:Abu_1244 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; SPTR: A8EU77 Ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(1676409..1677335) Arcobacter nitrofigilis DSM 7299 9171826 YP_003655828.1 CDS Arnit_1667 NC_014166.1 1677524 1679638 D COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR012833:IPR005144; KEGG: abu:Abu_1243 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein; SPTR: A8EU76 Oxygen-sensitive ribonucleoside-triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; anaerobic ribonucleoside-triphosphate reductase 1677524..1679638 Arcobacter nitrofigilis DSM 7299 9171827 YP_003655829.1 CDS Arnit_1668 NC_014166.1 1679616 1679780 D KEGG: abu:Abu_1242 hypothetical protein; SPTR: A8EU75 Putative uncharacterized protein; hypothetical protein 1679616..1679780 Arcobacter nitrofigilis DSM 7299 9171828 YP_003655830.1 CDS Arnit_1669 NC_014166.1 1679758 1680435 D COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012840:IPR007197; KEGG: abu:Abu_1241 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A8EU74 Radical SAM domain protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 1679758..1680435 Arcobacter nitrofigilis DSM 7299 9171829 YP_003655831.1 CDS Arnit_1670 NC_014166.1 1680412 1681092 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1240 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EU73 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(1680412..1681092) Arcobacter nitrofigilis DSM 7299 9171830 YP_003655832.1 CDS Arnit_1671 NC_014166.1 1681100 1681945 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR004358:IPR005467:IPR003594; KEGG: tdn:Suden_1243 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B6BNA5 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase complement(1681100..1681945) Arcobacter nitrofigilis DSM 7299 9171831 YP_003655833.1 CDS Arnit_1672 NC_014166.1 1681921 1682310 R InterPro IPR000014:IPR000700:IPR001610:IPR013655; KEGG: abu:Abu_1239 two-component sensor histidine kinase; PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein; SPTR: A8EU72 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; putative PAS/PAC sensor protein complement(1681921..1682310) Arcobacter nitrofigilis DSM 7299 9171832 YP_003655834.1 CDS Arnit_1673 NC_014166.1 1682312 1683286 R COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731:IPR013785; KEGG: abu:Abu_1238 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: A8EU71 Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase complement(1682312..1683286) Arcobacter nitrofigilis DSM 7299 9171833 YP_003655835.1 CDS Arnit_1674 NC_014166.1 1683347 1683910 D COGs: COG0807 GTP cyclohydrolase II; InterPro IPR000926; KEGG: cco:CCC13826_0883 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; PRIAM: GTP cyclohydrolase II; SPTR: A7ZCL6 GTP cyclohydrolase-2; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; GTP cyclohydrolase II 1683347..1683910 Arcobacter nitrofigilis DSM 7299 9171834 YP_003655836.1 CDS Arnit_1675 NC_014166.1 1683910 1684494 D COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682; KEGG: abu:Abu_1236 16S rRNA methyltransferase GidB; PFAM: glucose inhibited division protein; SPTR: A8EU69 Ribosomal RNA small subunit methyltransferase G; TIGRFAM: methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB; methyltransferase GidB 1683910..1684494 Arcobacter nitrofigilis DSM 7299 9171835 YP_003655837.1 CDS Arnit_1676 NC_014166.1 1684494 1684715 D KEGG: abu:Abu_1235 hypothetical protein; SPTR: A8EU68 Putative uncharacterized protein; PFAM: Prokaryotic metallothionein; hypothetical protein 1684494..1684715 Arcobacter nitrofigilis DSM 7299 9171836 YP_003655838.1 CDS Arnit_1677 NC_014166.1 1684712 1685083 D KEGG: abu:Abu_1234 hypothetical protein; SPTR: A8EU67 Putative uncharacterized protein; hypothetical protein 1684712..1685083 Arcobacter nitrofigilis DSM 7299 9171837 YP_003655839.1 CDS Arnit_1678 NC_014166.1 1685086 1685232 D KEGG: abu:Abu_1233 hypothetical protein; SPTR: A8EU66 Putative uncharacterized protein; hypothetical protein 1685086..1685232 Arcobacter nitrofigilis DSM 7299 9171838 YP_003655840.1 CDS Arnit_1679 NC_014166.1 1685225 1687240 D COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR015944:IPR002311:IPR006194; KEGG: abu:Abu_1232 glycyl-tRNA synthetase subunit beta; PFAM: glycyl-tRNA synthetase beta subunit; PRIAM: Glycine--tRNA ligase; SPTR: A8EU65 Glycyl-tRNA synthetase, beta chain; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; glycyl-tRNA synthetase subunit beta 1685225..1687240 Arcobacter nitrofigilis DSM 7299 9171839 YP_003655841.1 CDS Arnit_1680 NC_014166.1 1687250 1687390 D InterPro IPR012556; KEGG: abu:Abu_1722 hypothetical protein; PFAM: Entericidin EcnAB; SPTR: A8EVJ6 Putative uncharacterized protein; PFAM: Entericidin EcnA/B family; entericidin ecnAB 1687250..1687390 Arcobacter nitrofigilis DSM 7299 9171840 YP_003655842.1 CDS Arnit_1681 NC_014166.1 1687413 1687694 R KEGG: tdn:Suden_1228 uroporphyrinogen-III synthase; SPTR: Q30R75 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase complement(1687413..1687694) Arcobacter nitrofigilis DSM 7299 9171841 YP_003655843.1 CDS Arnit_1682 NC_014166.1 1687828 1688073 R COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR004509:IPR003583:IPR000445; KEGG: tdn:Suden_0339 hypothetical protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: C8N8I2 Competence protein CelA; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; competence protein ComEA complement(1687828..1688073) Arcobacter nitrofigilis DSM 7299 9171842 YP_003655844.1 CDS Arnit_1683 NC_014166.1 1688170 1688670 R COGs: COG3613 Nucleoside 2-deoxyribosyltransferase; InterPro IPR007710; KEGG: bav:BAV3392 nucleoside 2-deoxyribosyltransferase; PFAM: nucleoside 2-deoxyribosyltransferase; SPTR: B6BP01 Nucleoside 2-deoxyribosyltransferase; PFAM: Nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase complement(1688170..1688670) Arcobacter nitrofigilis DSM 7299 9171843 YP_003655845.1 CDS Arnit_1684 NC_014166.1 1688697 1689596 R COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: tdn:Suden_1228 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Q30R75 Uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen III synthase HEM4 complement(1688697..1689596) Arcobacter nitrofigilis DSM 7299 9171844 YP_003655846.1 CDS Arnit_1685 NC_014166.1 1689929 1690471 R KEGG: hypothetical protein; SPTR: Q245H8 Putative uncharacterized protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; hypothetical protein complement(1689929..1690471) Arcobacter nitrofigilis DSM 7299 9171845 YP_003655847.1 CDS Arnit_1686 NC_014166.1 1690468 1690785 R KEGG: hypothetical protein; SPTR: A3HUF2 Putative uncharacterized protein; hypothetical protein complement(1690468..1690785) Arcobacter nitrofigilis DSM 7299 9171846 YP_003655848.1 CDS Arnit_1687 NC_014166.1 1690787 1691098 R InterPro IPR001387:IPR010982; KEGG: amt:Amet_4400 XRE family plasmid maintenance system antidote protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A6TK93 Plasmid maintenance system antidote protein, XRE family; PFAM: Helix-turn-helix; plasmid maintenance system antidote protein complement(1690787..1691098) Arcobacter nitrofigilis DSM 7299 9171847 YP_003655849.1 CDS Arnit_1688 NC_014166.1 1691200 1691436 D KEGG: conserved hypothetical protein; SPTR: O97278 ABC transporter, putative; hypothetical protein 1691200..1691436 Arcobacter nitrofigilis DSM 7299 9171848 YP_003655850.1 CDS Arnit_1689 NC_014166.1 1691429 1691896 D KEGG: nis:NIS_0461 hypothetical protein; SPTR: A6Q266 Phage-related protein; hypothetical protein 1691429..1691896 Arcobacter nitrofigilis DSM 7299 9171849 YP_003655851.1 CDS Arnit_1690 NC_014166.1 1691889 1693040 D COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR013762:IPR002104; KEGG: nam:NAMH_1173 phage integrase; PFAM: integrase family protein; SPTR: B9LAB1 Phage integrase; PFAM: Phage integrase family; integrase family protein 1691889..1693040 Arcobacter nitrofigilis DSM 7299 9171850 YP_003655852.1 CDS Arnit_1691 NC_014166.1 1693042 1693347 D KEGG: gfo:GFO_0393 hyalin domain-containing protein; SPTR: Q7UA22 Putative uncharacterized protein; hypothetical protein 1693042..1693347 Arcobacter nitrofigilis DSM 7299 9171851 YP_003655853.1 CDS Arnit_1692 NC_014166.1 1693473 1693874 D KEGG: sab:SAB2254c hypothetical protein; SPTR: Q2YZ10 Probable membrane protein; hypothetical protein 1693473..1693874 Arcobacter nitrofigilis DSM 7299 9171852 YP_003655854.1 CDS Arnit_1693 NC_014166.1 1694279 1694485 D KEGG: hya:HY04AAS1_0302 hypothetical protein; SPTR: B4U781 Putative uncharacterized protein; hypothetical protein 1694279..1694485 Arcobacter nitrofigilis DSM 7299 9171853 YP_003655855.1 CDS Arnit_1694 NC_014166.1 1694466 1695602 D COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR014729:IPR011063; KEGG: cbk:CLL_A2764 putative aminotransferase, class V; PFAM: PP-loop domain protein; SPTR: B2TNZ5 Putative aminotransferase, class V; PFAM: Phosphoadenosine phosphosulfate reductase family; PP-loop domain-containing protein 1694466..1695602 Arcobacter nitrofigilis DSM 7299 9171854 YP_003655856.1 CDS Arnit_1695 NC_014166.1 1695590 1696981 D KEGG: cha:CHAB381_1569 hypothetical protein; SPTR: C2Q4Y4 Putative uncharacterized protein; hypothetical protein 1695590..1696981 Arcobacter nitrofigilis DSM 7299 9171855 YP_003655857.1 CDS Arnit_1696 NC_014166.1 1696978 1697175 D KEGG: mmy:MSC_0803 alkylphosphonate ABC transporter, ATP-binding component; SPTR: Q6MSH1 Alkylphosphonate ABC transporter, ATP-binding component; hypothetical protein 1696978..1697175 Arcobacter nitrofigilis DSM 7299 9171856 YP_003655858.1 CDS Arnit_1697 NC_014166.1 1697169 1697585 D InterPro IPR002196; KEGG: syf:Synpcc7942_0756 chain A, D20c mutant of T4 lysozyme; PFAM: glycoside hydrolase family 24; SPTR: B0VF72 Lysozyme; PFAM: Phage lysozyme; family 24 glycoside hydrolase 1697169..1697585 Arcobacter nitrofigilis DSM 7299 9171857 YP_003655859.1 CDS Arnit_1698 NC_014166.1 1697587 1697787 D KEGG: hypothetical protein ; K02555 M-phase inducer tyrosine phosphatase; hypothetical protein 1697587..1697787 Arcobacter nitrofigilis DSM 7299 9171858 YP_003655860.1 CDS Arnit_1699 NC_014166.1 1697791 1698876 D KEGG: hypothetical protein; SPTR: A0CJG7 Chromosome undetermined scaffold_2, whole genome shotgun sequence; hypothetical protein 1697791..1698876 Arcobacter nitrofigilis DSM 7299 9171859 YP_003655861.1 CDS Arnit_1700 NC_014166.1 1698889 1699056 D KEGG: mcl:MCCL_0364 hypothetical protein; SPTR: C6MGK9 Peptidase M23; hypothetical protein 1698889..1699056 Arcobacter nitrofigilis DSM 7299 9171860 YP_003655862.1 CDS Arnit_1701 NC_014166.1 1699049 1699900 D KEGG: DNA-directed RNA polymerase, omega subunit family protein; SPTR: Q23DH8 DNA-directed RNA polymerase, omega subunit family protein; hypothetical protein 1699049..1699900 Arcobacter nitrofigilis DSM 7299 9171861 YP_003655863.1 CDS Arnit_1702 NC_014166.1 1699914 1700717 D KEGG: pct:PC1_2526 methyl-accepting chemotaxis sensory transducer; SPTR: C9LTG5 Putative autotransporter beta-domain protein; hypothetical protein 1699914..1700717 Arcobacter nitrofigilis DSM 7299 9171862 YP_003655864.1 CDS Arnit_1703 NC_014166.1 1700714 1701076 D KEGG: hypothetical protein; SPTR: A2D959 Putative uncharacterized protein; hypothetical protein 1700714..1701076 Arcobacter nitrofigilis DSM 7299 9171863 YP_003655865.1 CDS Arnit_1704 NC_014166.1 1701107 1701454 D KEGG: mch:Mchl_0889 penicillin-binding protein, 1A family; SPTR: Q4PZI0 Reticulocyte binding protein 2; hypothetical protein 1701107..1701454 Arcobacter nitrofigilis DSM 7299 9171864 YP_003655866.1 CDS Arnit_1705 NC_014166.1 1701617 1702015 D KEGG: hypothetical protein ; K03124 transcription initiation factor TFIIB; SPTR: A8YBR7 Similar to tr|Q3M5L8|Q3M5L8_ANAVT Hypothetical protein; hypothetical protein 1701617..1702015 Arcobacter nitrofigilis DSM 7299 9171865 YP_003655867.1 CDS Arnit_1706 NC_014166.1 1702100 1703317 D KEGG: snm:SP70585_1587 G5 domain family; SPTR: C4FQK8 Putative uncharacterized protein; hypothetical protein 1702100..1703317 Arcobacter nitrofigilis DSM 7299 9171866 YP_003655868.1 CDS Arnit_1707 NC_014166.1 1703320 1703616 D KEGG: hypothetical protein; SPTR: Q58N19 Putative uncharacterized protein; hypothetical protein 1703320..1703616 Arcobacter nitrofigilis DSM 7299 9171867 YP_003655869.1 CDS Arnit_1708 NC_014166.1 1703617 1703835 D KEGG: hypothetical protein; SPTR: A8RA76 Putative uncharacterized protein; hypothetical protein 1703617..1703835 Arcobacter nitrofigilis DSM 7299 9171868 YP_003655870.1 CDS Arnit_1709 NC_014166.1 1704118 1705149 D COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterProIPR000422:IPR010916:IPR017945:IPR016299:IPR 000926; KEGG: abu:Abu_1228 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: A8EU64 Bifunctional GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1704118..1705149 Arcobacter nitrofigilis DSM 7299 9171871 YP_003655871.1 CDS Arnit_1710 NC_014166.1 1705165 1705656 R KEGG: cno:NT01CX_0851 sensor histidine kinase; SPTR: B1BTE1 Putative uncharacterized protein; hypothetical protein complement(1705165..1705656) Arcobacter nitrofigilis DSM 7299 9171872 YP_003655872.1 CDS Arnit_1711 NC_014166.1 1705726 1707303 R COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR001272:IPR015994:IPR008210:IPR013035; KEGG: abu:Abu_1227 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); PRIAM: Phosphoenolpyruvate carboxykinase (ATP); SPTR: A8EU63 Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase complement(1705726..1707303) Arcobacter nitrofigilis DSM 7299 9171873 YP_003655873.1 CDS Arnit_1712 NC_014166.1 1707325 1708647 R COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: tdn:Suden_1258 pyruvate carboxylase/oxaloacetate decarboxylase biotin carboxyl carrier subunit alpha; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; PRIAM: Oxaloacetate decarboxylase; SPTR: Q30R45 Pyruvate carboxylase/oxaloacetate decarboxylase biotin carboxyl carrier (Alpha) subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta complement(1707325..1708647) Arcobacter nitrofigilis DSM 7299 9171874 YP_003655874.1 CDS Arnit_1713 NC_014166.1 1708669 1710486 R COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterProIPR001882:IPR000089:IPR000891:IPR011053:IPR 013785; KEGG: abu:Abu_1226 pyruvate/oxaloacetate carboxyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; PRIAM: Pyruvate carboxylase; SPTR: A8ER79 Pyruvate/oxaloacetate carboxyltransferase; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; pyruvate carboxylase complement(1708669..1710486) Arcobacter nitrofigilis DSM 7299 9171875 YP_003655875.1 CDS Arnit_1714 NC_014166.1 1710492 1710743 R InterPro IPR005899; KEGG: sun:SUN_1434 Na+-transporting oxaloacetate decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; SPTR: B6BN70 Oxaloacetate decarboxylase gamma chain; TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit; sodium pump decarboxylase subunit gamma complement(1710492..1710743) Arcobacter nitrofigilis DSM 7299 9171876 YP_003655876.1 CDS Arnit_1715 NC_014166.1 1710861 1710956 R hypothetical protein complement(1710861..1710956) Arcobacter nitrofigilis DSM 7299 9171877 YP_003655877.1 CDS Arnit_1716 NC_014166.1 1711053 1711709 D COGs: COG2932 transcriptional regulator protein; InterPro IPR019756:IPR015927:IPR011056:IPR019759; KEGG: abu:Abu_1223 S24 family peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: A8EU59 Peptidase, S24 family; PFAM: Peptidase S24-like; putative phage repressor 1711053..1711709 Arcobacter nitrofigilis DSM 7299 9171878 YP_003655878.1 CDS Arnit_1717 NC_014166.1 1711706 1712695 R InterPro IPR000713; KEGG: abu:Abu_1222 hypothetical protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8EU58 Putative uncharacterized protein; cytoplasmic peptidoglycan synthetase domain-containing protein complement(1711706..1712695) Arcobacter nitrofigilis DSM 7299 9171879 YP_003655879.1 CDS Arnit_1718 NC_014166.1 1712704 1714650 R COGs: COG0143 Methionyl-tRNA synthetase; InterProIPR002304:IPR004495:IPR014758:IPR002547:IPR 016027:IPR009080:IPR014729:IPR012340:IPR015413; KEGG: abu:Abu_1221 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; SPTR: A8EU57 Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1712704..1714650) Arcobacter nitrofigilis DSM 7299 9171880 YP_003655880.1 CDS Arnit_1719 NC_014166.1 1714664 1714864 R KEGG: abu:Abu_1220 hypothetical protein; SPTR: A8EU56 Putative uncharacterized protein; hypothetical protein complement(1714664..1714864) Arcobacter nitrofigilis DSM 7299 9171881 YP_003655881.1 CDS Arnit_1720 NC_014166.1 1714854 1715699 R COGs: COG0158 Fructose-1 6-bisphosphatase; InterPro IPR000146; KEGG: abu:Abu_1219 fructose-1,6-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase; PRIAM: Fructose-bisphosphatase; SPTR: A8EU55 Fructose-1,6-bisphosphatase class 1; PFAM: Fructose-1-6-bisphosphatase; fructose-bisphosphatase complement(1714854..1715699) Arcobacter nitrofigilis DSM 7299 9171882 YP_003655882.1 CDS Arnit_1721 NC_014166.1 1715699 1716202 R COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: abu:Abu_1218 molybdopterin-guanine dinucleotide biosynthesis protein; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; SPTR: A8EU54 Molybdopterin-guanine dinucleotide biosynthesis protein; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein B complement(1715699..1716202) Arcobacter nitrofigilis DSM 7299 9171883 YP_003655883.1 CDS Arnit_1722 NC_014166.1 1716281 1716790 D KEGG: abu:Abu_1217 hypothetical protein; SPTR: A8EU53 Putative uncharacterized protein; hypothetical protein 1716281..1716790 Arcobacter nitrofigilis DSM 7299 9171884 YP_003655884.1 CDS Arnit_1723 NC_014166.1 1716756 1718147 R KEGG: abu:Abu_1216 soluble lytic murein transglycosylase (slt); SPTR: A8EU52 Soluble lytic murein transglycosylase (Slt); PFAM: Transglycosylase SLT domain; hypothetical protein complement(1716756..1718147) Arcobacter nitrofigilis DSM 7299 9171885 YP_003655885.1 CDS Arnit_1724 NC_014166.1 1718157 1718435 R InterPro IPR003425; KEGG: abu:Abu_1215 hypothetical protein; PFAM: protein of unknown function YGGT; SPTR: A8EU51 Conserved hypothetical membrane protein; PFAM: YGGT family; hypothetical protein complement(1718157..1718435) Arcobacter nitrofigilis DSM 7299 9171886 YP_003655886.1 CDS Arnit_1725 NC_014166.1 1718432 1719721 R COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR004527:IPR020060:IPR008925:IPR020061:IPR 020058; KEGG: abu:Abu_1214 glutamylglutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: A8EU50 Glutamyl-tRNA synthetase 2; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase complement(1718432..1719721) Arcobacter nitrofigilis DSM 7299 9171887 YP_003655887.1 CDS Arnit_1726 NC_014166.1 1719723 1720961 R COGs: COG0612 Zn-dependent peptidase; InterPro IPR011249:IPR011237:IPR011765:IPR007863; KEGG: abu:Abu_1213 M16 family peptidase; PFAM: peptidase M16 domain protein; SPTR: A8EU49 Peptidase, M16 family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase M16 domain-containing protein complement(1719723..1720961) Arcobacter nitrofigilis DSM 7299 9171888 YP_003655888.1 CDS Arnit_1727 NC_014166.1 1721014 1722081 R COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050:IPR005244:IPR013785:IPR007197; KEGG: abu:Abu_1212 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: A8EU48 SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; radical SAM domain-containing protein complement(1721014..1722081) Arcobacter nitrofigilis DSM 7299 9171889 YP_003655889.1 CDS Arnit_1728 NC_014166.1 1722100 1724361 R COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR001412:IPR010827:IPR000184; KEGG: abu:Abu_1211 outer membrane surface antigen protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: A8EU47 Outer membrane surface antigen protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein complement(1722100..1724361) Arcobacter nitrofigilis DSM 7299 9171890 YP_003655890.1 CDS Arnit_1729 NC_014166.1 1724470 1725300 D COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099:IPR016040; KEGG: abu:Abu_1210 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: A8EU46 Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 1724470..1725300 Arcobacter nitrofigilis DSM 7299 9171891 YP_003655891.1 CDS Arnit_1730 NC_014166.1 1725297 1726106 R COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390:IPR000489:IPR011005; KEGG: abu:Abu_1202 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: A8EU38 Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; dihydropteroate synthase complement(1725297..1726106) Arcobacter nitrofigilis DSM 7299 9171892 YP_003655892.1 CDS Arnit_1731 NC_014166.1 1726134 1726757 R KEGG: abu:Abu_1201 putative DNA polymerase III delta prime subunit HolB; SPTR: A8EU37 Putative DNA polymerase III delta prime subunit HolB; putative DNA polymerase III delta prime subunit HolB complement(1726134..1726757) Arcobacter nitrofigilis DSM 7299 9171893 YP_003655893.1 CDS Arnit_1732 NC_014166.1 1726760 1727311 R KEGG: abu:Abu_1200 hypothetical protein; SPTR: A8EU36 Putative uncharacterized protein; PFAM: DNA replication regulator; hypothetical protein complement(1726760..1727311) Arcobacter nitrofigilis DSM 7299 9171894 YP_003655894.1 CDS Arnit_1733 NC_014166.1 1727314 1728522 R COGs: COG0527 Aspartokinase; InterProIPR005260:IPR001341:IPR018042:IPR001048:IPR 002912; KEGG: abu:Abu_1199 aspartokinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: A8EU35 Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; aspartate kinase complement(1727314..1728522) Arcobacter nitrofigilis DSM 7299 9171895 YP_003655895.1 CDS Arnit_1734 NC_014166.1 1728540 1729043 R InterPro IPR020084:IPR020476:IPR015797:IPR000086; KEGG: abu:Abu_1198 dinucleoside polyphosphate hydrolase; PFAM: NUDIX hydrolase; SPTR: A8EU34 (Di)nucleoside polyphosphate hydrolase; PFAM: NUDIX domain; NUDIX hydrolase complement(1728540..1729043) Arcobacter nitrofigilis DSM 7299 9171896 YP_003655896.1 CDS Arnit_1735 NC_014166.1 1729099 1730160 D COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterProIPR004559:IPR006638:IPR013785:IPR007197:IPR 010723; KEGG: abu:Abu_1197 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EU33 Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase 1729099..1730160 Arcobacter nitrofigilis DSM 7299 9171897 YP_003655897.1 CDS Arnit_1736 NC_014166.1 1730220 1731044 D COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR004556:IPR002052:IPR007848; KEGG: abu:Abu_1196 modification methylase; PFAM: methyltransferase small; SPTR: A8EU32 Modification methylase; TIGRFAM: modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; HemK family modification methylase 1730220..1731044 Arcobacter nitrofigilis DSM 7299 9171898 YP_003655898.1 CDS Arnit_1737 NC_014166.1 1731055 1733022 D COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: abu:Abu_1195 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: A8EU31 Oligopeptidase A; PFAM: Peptidase family M3; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; oligopeptidase A 1731055..1733022 Arcobacter nitrofigilis DSM 7299 9171899 YP_003655899.1 CDS Arnit_1738 NC_014166.1 1733069 1733545 D KEGG: abu:Abu_1194 hypothetical protein; SPTR: A8EU30 Putative uncharacterized protein; hypothetical protein 1733069..1733545 Arcobacter nitrofigilis DSM 7299 9171900 YP_003655900.1 CDS Arnit_1739 NC_014166.1 1733566 1733841 D KEGG: abu:Abu_1193 hypothetical protein; SPTR: A8EU29 Putative uncharacterized protein; hypothetical protein 1733566..1733841 Arcobacter nitrofigilis DSM 7299 9171901 YP_003655901.1 CDS Arnit_1740 NC_014166.1 1733846 1734901 D COGs: COG4974 Site-specific recombinase XerD; InterPro IPR000215:IPR011010:IPR013762:IPR002104; KEGG: abu:Abu_1191 integrase/recombinase XerD; PFAM: integrase family protein; SPTR: A8EU27 Integrase/recombinase XerD; PFAM: Phage integrase family; integrase family protein 1733846..1734901 Arcobacter nitrofigilis DSM 7299 9171902 YP_003655902.1 CDS Arnit_1741 NC_014166.1 1735158 1736636 D COGs: COG3515 conserved hypothetical protein; InterPro IPR010657; KEGG: vfm:VFMJ11_1088 type VI secretion-associated protein, family; PFAM: ImpA domain protein; SPTR: B5FD91 Type VI secretion-associated protein, family; PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; ImpA domain-containing protein 1735158..1736636 Arcobacter nitrofigilis DSM 7299 9171903 YP_003655903.1 CDS Arnit_1742 NC_014166.1 1736648 1737136 D COGs: COG3516 conserved hypothetical protein; InterPro IPR008312; KEGG: vfm:VFMJ11_A0823 type VI secretion protein, family; PFAM: conserved hypothetical protein; SPTR: B5EUK4 Type VI secretion protein, family; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family; type VI secretion protein 1736648..1737136 Arcobacter nitrofigilis DSM 7299 9171904 YP_003655904.1 CDS Arnit_1743 NC_014166.1 1737146 1738621 D COGs: COG3517 conserved hypothetical protein; InterPro IPR010269; KEGG: pst:PSPTO_5432 hypothetical protein; PFAM: protein of unknown function DUF877; SPTR: Q87U76 Putative uncharacterized protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; type VI secretion protein 1737146..1738621 Arcobacter nitrofigilis DSM 7299 9171905 YP_003655905.1 CDS Arnit_1744 NC_014166.1 1738623 1739039 D COGs: COG3518 conserved hypothetical protein; InterPro IPR017737:IPR007048; KEGG: pen:PSEEN0525 hypothetical protein; PFAM: GPW/gp25 family protein; SPTR: Q1IFT1 Putative uncharacterized protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein; type VI secretion system lysozyme-like protein 1738623..1739039 Arcobacter nitrofigilis DSM 7299 9171906 YP_003655906.1 CDS Arnit_1745 NC_014166.1 1739029 1740801 D COGs: COG3519 conserved hypothetical protein; InterPro IPR010272; KEGG: pen:PSEEN0526 hypothetical protein; PFAM: protein of unknown function DUF879; SPTR: Q1IFT0 Putative uncharacterized protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family; type VI secretion protein 1739029..1740801 Arcobacter nitrofigilis DSM 7299 9171907 YP_003655907.1 CDS Arnit_1746 NC_014166.1 1740810 1741802 D COGs: COG3520 conserved hypothetical protein; InterPro IPR010732; KEGG: tau:Tola_0198 type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; SPTR: C4L829 Type VI secretion protein, VC_A0111 family; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family; type VI secretion protein 1740810..1741802 Arcobacter nitrofigilis DSM 7299 9171908 YP_003655908.1 CDS Arnit_1747 NC_014166.1 1741802 1744336 D COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017729:IPR018368:IPR001270:IPR003593:IPR 003959:IPR013093:IPR019489; KEGG: vfi:VF_0999 ATP-dependent protease subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: Q5E652 ATP-dependent protease subunit; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family; type VI secretion ATPase, ClpV1 family 1741802..1744336 Arcobacter nitrofigilis DSM 7299 9171909 YP_003655909.1 CDS Arnit_1748 NC_014166.1 1744349 1744480 D hypothetical protein 1744349..1744480 Arcobacter nitrofigilis DSM 7299 9171910 YP_003655910.1 CDS Arnit_1749 NC_014166.1 1744484 1745767 D COGs: COG3456 conserved hypothetical protein contains FHA domain; InterPro IPR017735:IPR000253:IPR008984; KEGG: vfi:VF_0997 phospho-specific protein-protein interaction motif-containing protein; PFAM: Forkhead-associated protein; SPTR: Q5E654 Phospho-specific protein-protein interaction motif FHA; TIGRFAM: type VI secretion system FHA domain protein; PFAM: FHA domain; TIGRFAM: type VI secretion system FHA domain protein; FHA domain-containing protein 1744484..1745767 Arcobacter nitrofigilis DSM 7299 9171911 YP_003655911.1 CDS Arnit_1750 NC_014166.1 1745778 1746227 D COGs: COG3521 conserved hypothetical protein; InterPro IPR017734; KEGG: vex:VEA_000013 type VI secretion lipoprotein/VasD; SPTR: Q1VBV4 Putative uncharacterized protein; TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; type VI secretion lipoprotein 1745778..1746227 Arcobacter nitrofigilis DSM 7299 9171912 YP_003655912.1 CDS Arnit_1751 NC_014166.1 1746227 1747558 D COGs: COG3522 conserved hypothetical protein; InterPro IPR010263; KEGG: vfm:VFMJ11_1077 type VI secretion protein, family; PFAM: protein of unknown function DUF876; SPTR: Q5E656 Putative uncharacterized protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family; type VI secretion protein 1746227..1747558 Arcobacter nitrofigilis DSM 7299 9171913 YP_003655913.1 CDS Arnit_1752 NC_014166.1 1747576 1748442 D COGs: COG3455 conserved hypothetical protein; InterPro IPR017732; KEGG: vsa:VSAL_I1114 putative type VI secretion protein VasF; PFAM: Type IV / VI secretion system, DotU; SPTR: B6EJ68 Putative type VI secretion protein VasF; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family; type IV / VI secretion system protein 1747576..1748442 Arcobacter nitrofigilis DSM 7299 9171914 YP_003655914.1 CDS Arnit_1753 NC_014166.1 1748439 1751906 D COGs: COG3523 conserved hypothetical protein; InterPro IPR017731:IPR016160:IPR009612:IPR010623; KEGG: vfi:VF_0993 secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; SPTR: Q5E658 Secretion protein IcmF; TIGRFAM: type VI secretion protein IcmF; PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing; TIGRFAM: type VI secretion protein IcmF; type VI secretion protein IcmF 1748439..1751906 Arcobacter nitrofigilis DSM 7299 9171915 YP_003655915.1 CDS Arnit_1754 NC_014166.1 1751906 1752583 D COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932; KEGG: pen:PSEEN0536 serine/threonine phosphoprotein phosphatase Stp1; SMART: protein phosphatase 2C domain protein; SPTR: Q1IFS0 Serine/threonine phosphoprotein phosphatase Stp1; PFAM: Protein phosphatase 2C; protein serine/threonine phosphatase 1751906..1752583 Arcobacter nitrofigilis DSM 7299 9171916 YP_003655916.1 CDS Arnit_1755 NC_014166.1 1752580 1753458 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719:IPR011009:IPR020635:IPR002290:IPR 017442; KEGG: ppr:PBPRA0657 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Q6LUE7 Hypothetical serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 1752580..1753458 Arcobacter nitrofigilis DSM 7299 9171917 YP_003655917.1 CDS Arnit_1756 NC_014166.1 1753507 1754031 D COGs: COG3157 Hemolysin-coregulated protein (uncharacterized); InterPro IPR017728:IPR008514; KEGG: vfm:VFMJ11_A1070 hemolysin co-regulated protein; PFAM: protein of unknown function DUF796; SPTR: Q5DYX2 Hemolysin co-regulated protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family; Hcp1 family type VI secretion system effector 1753507..1754031 Arcobacter nitrofigilis DSM 7299 9171918 YP_003655918.1 CDS Arnit_1757 NC_014166.1 1754154 1757060 D COGs: COG3501 conserved hypothetical protein; InterPro IPR017847:IPR006533; KEGG: vfi:VF_1229 VgrG protein; PFAM: Rhs element Vgr protein; SPTR: Q5E5H2 VgrG protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Phage-related baseplate assembly protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; Rhs element Vgr protein 1754154..1757060 Arcobacter nitrofigilis DSM 7299 9171919 YP_003655919.1 CDS Arnit_1758 NC_014166.1 1757095 1758183 D COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterProIPR019734:IPR013026:IPR006597:IPR011990:IPR 001440; KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; TPR repeat-containing protein; SPTR: B3ESM2 Putative uncharacterized protein; PFAM: Sel1 repeat; Tetratricopeptide repeat; Sel1 domain-containing protein repeat-containing protein 1757095..1758183 Arcobacter nitrofigilis DSM 7299 9171920 YP_003655920.1 CDS Arnit_1759 NC_014166.1 1758176 1760764 D InterPro IPR018712; KEGG: chu:CHU_0711 hypothetical protein; PFAM: Protein of unknown function DUF2235; SPTR: A3JFP8 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2235); hypothetical protein 1758176..1760764 Arcobacter nitrofigilis DSM 7299 9171921 YP_003655921.1 CDS Arnit_1760 NC_014166.1 1760774 1763308 D COGs: COG3501 conserved hypothetical protein; InterPro IPR017847:IPR006533; KEGG: vfi:VF_1229 VgrG protein; PFAM: Rhs element Vgr protein; SPTR: Q5E5H2 VgrG protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Phage-related baseplate assembly protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; Rhs element Vgr protein 1760774..1763308 Arcobacter nitrofigilis DSM 7299 9171922 YP_003655922.1 CDS Arnit_1761 NC_014166.1 1763296 1763886 D KEGG: ppr:PBPRB0091 hypothetical protein; SPTR: C4SID2 Putative uncharacterized protein; hypothetical protein 1763296..1763886 Arcobacter nitrofigilis DSM 7299 9171923 YP_003655923.1 CDS Arnit_1762 NC_014166.1 1763886 1764143 D KEGG: fph:Fphi_1917 hypothetical protein; SPTR: C3WJ13 COME operon protein 3; hypothetical protein 1763886..1764143 Arcobacter nitrofigilis DSM 7299 9171924 YP_003655924.1 CDS Arnit_1763 NC_014166.1 1764407 1764658 D KEGG: cac:CAC3279 ChW repeat-containing protein; SPTR: Q97E37 Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats; PFAM: Leucine Rich Repeat; ChW repeat-containing protein 1764407..1764658 Arcobacter nitrofigilis DSM 7299 9171925 YP_003655925.1 CDS Arnit_1764 NC_014166.1 1764633 1765316 R KEGG: cha:CHAB381_0153 Cpp12; SPTR: A7HZS1 Cpp12; hypothetical protein complement(1764633..1765316) Arcobacter nitrofigilis DSM 7299 9171926 YP_003655926.1 CDS Arnit_1765 NC_014166.1 1765448 1766446 D KEGG: conserved hypothetical protein; SPTR: C0H520 RNB-like protein, putative; hypothetical protein 1765448..1766446 Arcobacter nitrofigilis DSM 7299 9171927 YP_003655927.1 CDS Arnit_1766 NC_014166.1 1766459 1766857 D KEGG: cbe:Cbei_3742 hypothetical protein; SPTR: C3WCT0 Predicted protein; hypothetical protein 1766459..1766857 Arcobacter nitrofigilis DSM 7299 9171928 YP_003655928.1 CDS Arnit_1767 NC_014166.1 1766952 1768028 R COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR001789:IPR000673:IPR011006:IPR008248; KEGG: abu:Abu_1188 protein-glutamate methylesterase CheB; PFAM: CheB methylesterase; response regulator receiver; PRIAM: Protein-glutamate methylesterase; SMART: response regulator receiver; SPTR: A8EU24 Protein-glutamate methylesterase CheB; PFAM: CheB methylesterase; Response regulator receiver domain; response regulator receiver modulated CheB methylesterase complement(1766952..1768028) Arcobacter nitrofigilis DSM 7299 9171929 YP_003655929.1 CDS Arnit_1768 NC_014166.1 1768042 1768719 R COGs: COG1871 Chemotaxis protein; stimulates methylation of MCP protein; InterPro IPR005659; KEGG: abu:Abu_1187 chemotaxis protein CheD; PFAM: CheD family protein; SPTR: A8EU23 Chemotaxis protein CheD; PFAM: CheD; CheD protein complement(1768042..1768719) Arcobacter nitrofigilis DSM 7299 9171930 YP_003655930.1 CDS Arnit_1769 NC_014166.1 1768716 1769558 R COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: abu:Abu_1186 chemotaxis protein methyltransferase; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: A8EU22 Chemotaxis protein methyltransferase; PFAM: CheR methyltransferase, SAM binding domain; CheR-type MCP methyltransferase complement(1768716..1769558) Arcobacter nitrofigilis DSM 7299 9171931 YP_003655931.1 CDS Arnit_1770 NC_014166.1 1769561 1771612 R COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR004358:IPR005467:IPR002545:IPR008207:IPR 003594:IPR009082:IPR004105; KEGG: abu:Abu_1185 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; PRIAM: Histidine kinase; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; SPTR: A8EU21 Chemotaxis protein CheA; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase CheA complement(1769561..1771612) Arcobacter nitrofigilis DSM 7299 9171932 YP_003655932.1 CDS Arnit_1771 NC_014166.1 1771625 1771993 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1184 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EU20 Chemotaxis protein CheY; PFAM: Response regulator receiver domain; response regulator receiver protein complement(1771625..1771993) Arcobacter nitrofigilis DSM 7299 9171933 YP_003655933.1 CDS Arnit_1772 NC_014166.1 1772064 1774241 R COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterProIPR012162:IPR004088:IPR003029:IPR020568:IPR 015847:IPR016027:IPR015848:IPR004087:IPR012340:IPR001247:I PR018111; KEGG: abu:Abu_1183 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: A8EU19 Polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase complement(1772064..1774241) Arcobacter nitrofigilis DSM 7299 9171934 YP_003655934.1 CDS Arnit_1773 NC_014166.1 1774244 1774915 R COGs: COG1926 phosphoribosyltransferase; KEGG: abu:Abu_1182 hypothetical protein; SPTR: A8EU18 Putative uncharacterized protein; PFAM: Phosphoribosyl transferase domain; hypothetical protein complement(1774244..1774915) Arcobacter nitrofigilis DSM 7299 9171935 YP_003655935.1 CDS Arnit_1774 NC_014166.1 1774916 1777012 R COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR007543; KEGG: abu:Abu_1181 hypothetical protein; PFAM: Organic solvent tolerance protein; SPTR: A8EU17 Conserved hypothetical membrane protein; PFAM: Organic solvent tolerance protein; organic solvent tolerance protein complement(1774916..1777012) Arcobacter nitrofigilis DSM 7299 9171936 YP_003655936.1 CDS Arnit_1775 NC_014166.1 1777005 1777448 R InterPro IPR010432; KEGG: abu:Abu_1180 hypothetical protein; PFAM: RDD domain containing protein; SPTR: A8EU16 Putative uncharacterized protein; PFAM: RDD family; RDD domain-containing protein complement(1777005..1777448) Arcobacter nitrofigilis DSM 7299 9171937 YP_003655937.1 CDS Arnit_1776 NC_014166.1 1777453 1778721 R COGs: COG0151 Phosphoribosylamine-glycine ligase; InterProIPR000115:IPR020559:IPR011761:IPR016185:IPR 011054:IPR013817:IPR013815:IPR013816:IPR020560:IPR020562:I PR020561; KEGG: abu:Abu_1179 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: A8EU15 Phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine/glycine ligase complement(1777453..1778721) Arcobacter nitrofigilis DSM 7299 9171938 YP_003655938.1 CDS Arnit_1777 NC_014166.1 1778949 1779593 R COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: abu:Abu_1177 putative uroporphyrinogen III cosynthase HemD; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: A8EU13 Putative uroporphyrinogen III cosynthase HemD; PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen III synthase HEM4 complement(1778949..1779593) Arcobacter nitrofigilis DSM 7299 9171939 YP_003655939.1 CDS Arnit_1778 NC_014166.1 1779586 1781169 R COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR002645:IPR011547; KEGG: abu:Abu_1176 sulfate permease family protein; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: A8EU12 Sulfate permease family protein; PFAM: Sulfate transporter family; STAS domain; sulfate transporter complement(1779586..1781169) Arcobacter nitrofigilis DSM 7299 9171940 YP_003655940.1 CDS Arnit_1779 NC_014166.1 1781188 1782630 R COGs: COG1160 GTPase; InterPro IPR005225:IPR016484:IPR006073:IPR002917; KEGG: abu:Abu_1175 GTP-binding protein EngA; PFAM: GTP-binding protein HSR1-related; SPTR: A8EU11 GTP-binding protein; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; GTP-binding protein Era; small GTP-binding protein domain; ribosome-associated GTPase EngA complement(1781188..1782630) Arcobacter nitrofigilis DSM 7299 9171941 YP_003655941.1 CDS Arnit_1780 NC_014166.1 1782723 1783265 R COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: abu:Abu_1174 hypothetical protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; SPTR: A8EU10 Putative uncharacterized protein; TIGRFAM: ribosomal subunit interface protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosomal subunit interface protein complement(1782723..1783265) Arcobacter nitrofigilis DSM 7299 9171942 YP_003655942.1 CDS Arnit_1781 NC_014166.1 1783350 1785491 R COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR003593:IPR018541; KEGG: abu:Abu_1159 cell division protein FtsK; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: A8ETZ5 Cell division protein FtsK; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; cell division protein FtsK complement(1783350..1785491) Arcobacter nitrofigilis DSM 7299 9171943 YP_003655943.1 CDS Arnit_1782 NC_014166.1 1785505 1786446 R COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterProIPR007691:IPR016160:IPR018294:IPR011004:IPR 020573:IPR001451; KEGG: abu:Abu_1158 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; SPTR: A8ETZ4 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(1785505..1786446) Arcobacter nitrofigilis DSM 7299 9171944 YP_003655944.1 CDS Arnit_1783 NC_014166.1 1786486 1786983 R COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789:IPR002912:IPR019455; KEGG: abu:Abu_1157 acetolactate synthase 3 regulatory subunit; PFAM: amino acid-binding ACT domain protein; Acetolactate synthase, small subunit-like; SPTR: A8ETZ3 Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit complement(1786486..1786983) Arcobacter nitrofigilis DSM 7299 9171945 YP_003655945.1 CDS Arnit_1784 NC_014166.1 1786976 1788670 R COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterProIPR012846:IPR000399:IPR012001:IPR012000:IPR 011766; KEGG: abu:Abu_1156 acetolactate synthase 3 catalytic subunit; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A8ETZ2 Acetolactate synthase, large subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit complement(1786976..1788670) Arcobacter nitrofigilis DSM 7299 9171946 YP_003655946.1 CDS Arnit_1785 NC_014166.1 1788818 1789627 D KEGG: abu:Abu_1155 hypothetical protein; SPTR: A8ETZ1 Putative uncharacterized protein; PFAM: Bacterial flagellin N-terminal helical region; hypothetical protein 1788818..1789627 Arcobacter nitrofigilis DSM 7299 9171947 YP_003655947.1 CDS Arnit_1786 NC_014166.1 1789616 1790533 R COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: abu:Abu_1154 Ppx/GppA phosphatase family protein; PFAM: Ppx/GppA phosphatase; SPTR: A8ETZ0 Ppx/GppA phosphatase family protein; PFAM: Ppx/GppA phosphatase family; Ppx/GppA phosphatase complement(1789616..1790533) Arcobacter nitrofigilis DSM 7299 9171948 YP_003655948.1 CDS Arnit_1787 NC_014166.1 1790533 1791090 R COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462; KEGG: abu:Abu_1153 CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: A8ETY9 CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(1790533..1791090) Arcobacter nitrofigilis DSM 7299 9171949 YP_003655949.1 CDS Arnit_1788 NC_014166.1 1791100 1792197 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: tdn:Suden_1511 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q30QE3 Diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1791100..1792197) Arcobacter nitrofigilis DSM 7299 9171950 YP_003655950.1 CDS Arnit_1789 NC_014166.1 1792302 1792550 D InterPro IPR010930; KEGG: abu:Abu_0538 hypothetical protein; PFAM: protein of unknown function DUF1078 domain protein; SPTR: A8ES81 Putative uncharacterized protein; hypothetical protein 1792302..1792550 Arcobacter nitrofigilis DSM 7299 9171951 YP_003655951.1 CDS Arnit_1790 NC_014166.1 1792555 1792986 D COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR005746:IPR017937:IPR006662:IPR017936:IPR 012336:IPR012335:IPR013766; KEGG: tdn:Suden_2099 thioredoxin; PFAM: Thioredoxin domain; SPTR: Q30NQ8 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 1792555..1792986 Arcobacter nitrofigilis DSM 7299 9171952 YP_003655952.1 CDS Arnit_1791 NC_014166.1 1792983 1793735 R COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR012089:IPR014729:IPR011063; KEGG: abu:Abu_0536 hypothetical protein; PFAM: PP-loop domain protein; SPTR: A8ES79 Putative uncharacterized protein; PFAM: PP-loop family; PP-loop domain-containing protein complement(1792983..1793735) Arcobacter nitrofigilis DSM 7299 9171953 YP_003655953.1 CDS Arnit_1792 NC_014166.1 1793925 1794113 D KEGG: abu:Abu_0535 hypothetical protein; SPTR: A8ES78 Putative uncharacterized protein; hypothetical protein 1793925..1794113 Arcobacter nitrofigilis DSM 7299 9171954 YP_003655954.1 CDS Arnit_1793 NC_014166.1 1794157 1796028 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090:IPR004089; KEGG: abu:Abu_1066 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ETQ2 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(1794157..1796028) Arcobacter nitrofigilis DSM 7299 9171955 YP_003655955.1 CDS Arnit_1794 NC_014166.1 1796040 1797737 R COGs: COG0069 Glutamate synthase domain 2; InterPro IPR013785:IPR002932; KEGG: sun:SUN_1986 hypothetical protein; PFAM: ferredoxin-dependent glutamate synthase; SPTR: A6QBS0 Putative uncharacterized protein; PFAM: Conserved region in glutamate synthase; ferredoxin-dependent glutamate synthase complement(1796040..1797737) Arcobacter nitrofigilis DSM 7299 9171956 YP_003655956.1 CDS Arnit_1795 NC_014166.1 1797836 1801402 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR016160:IPR001412:IPR016161:IPR016162:IPR 002872:IPR015590; KEGG: dal:Dalk_3943 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; SPTR: B8FJG0 Aldehyde Dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(1797836..1801402) Arcobacter nitrofigilis DSM 7299 9171957 YP_003655957.1 CDS Arnit_1796 NC_014166.1 1801574 1802296 R COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: dat:HRM2_04910 LivF2; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0QHP7 LivF2; PFAM: ABC transporter; ABC transporter-like protein complement(1801574..1802296) Arcobacter nitrofigilis DSM 7299 9171958 YP_003655958.1 CDS Arnit_1797 NC_014166.1 1802296 1803072 R COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: dps:DP2487 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1SMM8 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; ABC transporter-like protein complement(1802296..1803072) Arcobacter nitrofigilis DSM 7299 9171959 YP_003655959.1 CDS Arnit_1798 NC_014166.1 1803072 1804028 R COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dat:HRM2_04930 LivM2; PFAM: inner-membrane translocator; SPTR: C1SMM7 ABC-type branched-chain amino acid transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1803072..1804028) Arcobacter nitrofigilis DSM 7299 9171960 YP_003655960.1 CDS Arnit_1799 NC_014166.1 1804028 1804930 R COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dps:DP2489 high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); PFAM: inner-membrane translocator; SPTR: Q6AKA8 Probable high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1804028..1804930) Arcobacter nitrofigilis DSM 7299 9171961 YP_003655961.1 CDS Arnit_1800 NC_014166.1 1804949 1806070 R COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: dat:HRM2_04950 LivJ2; PFAM: Extracellular ligand-binding receptor; SPTR: C1SMM5 Amino acid-binding protein; PFAM: Receptor family ligand binding region; extracellular ligand-binding receptor complement(1804949..1806070) Arcobacter nitrofigilis DSM 7299 9171962 YP_003655962.1 CDS Arnit_1801 NC_014166.1 1806093 1806755 R KEGG: dma:DMR_24750 hypothetical protein; SPTR: C4XTG9 Putative uncharacterized protein; hypothetical protein complement(1806093..1806755) Arcobacter nitrofigilis DSM 7299 9171963 YP_003655963.1 CDS Arnit_1802 NC_014166.1 1806748 1806987 R KEGG: hypothetical protein; SPTR: C6RM66 Putative uncharacterized protein; hypothetical protein complement(1806748..1806987) Arcobacter nitrofigilis DSM 7299 9171964 YP_003655964.1 CDS Arnit_1803 NC_014166.1 1807164 1808045 R InterPro IPR000630:IPR000620; KEGG: maq:Maqu_2825 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A3Y9B2 Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein complement(1807164..1808045) Arcobacter nitrofigilis DSM 7299 9171965 YP_003655965.1 CDS Arnit_1804 NC_014166.1 1808180 1809028 D InterPro IPR014729:IPR006016; KEGG: cff:CFF8240_1256 hypothetical protein; PFAM: UspA domain protein; SPTR: B9D359 Universal stress protein family; PFAM: Universal stress protein family; UspA domain-containing protein 1808180..1809028 Arcobacter nitrofigilis DSM 7299 9171966 YP_003655966.1 CDS Arnit_1805 NC_014166.1 1809052 1810212 R COGs: COG2206 HD-GYP domain; KEGG: abu:Abu_0579 hypothetical protein; SPTR: A8ESC2 Putative uncharacterized protein; putative metal dependent phosphohydrolase complement(1809052..1810212) Arcobacter nitrofigilis DSM 7299 9171967 YP_003655967.1 CDS Arnit_1806 NC_014166.1 1810212 1811000 R KEGG: abu:Abu_0576 hypothetical protein; SPTR: A8ESB9 Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold; hypothetical protein complement(1810212..1811000) Arcobacter nitrofigilis DSM 7299 9171968 YP_003655968.1 CDS Arnit_1807 NC_014166.1 1811022 1811459 R COGs: COG1416 conserved hypothetical protein; InterPro IPR014865; KEGG: abu:Abu_0575 hypothetical protein; PFAM: Domain of unknown function DUF1791; SPTR: A8ESB8 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family; hypothetical protein complement(1811022..1811459) Arcobacter nitrofigilis DSM 7299 9171969 YP_003655969.1 CDS Arnit_1808 NC_014166.1 1811468 1811911 R InterPro IPR005302:IPR011037; KEGG: abu:Abu_0574 hypothetical protein; SPTR: A8ESB7 Putative uncharacterized protein; hypothetical protein complement(1811468..1811911) Arcobacter nitrofigilis DSM 7299 9171970 YP_003655970.1 CDS Arnit_1809 NC_014166.1 1811908 1812315 R InterPro IPR017937:IPR017936:IPR012336:IPR012335; KEGG: abu:Abu_0573 hypothetical protein; SPTR: A8ESB6 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255; hypothetical protein complement(1811908..1812315) Arcobacter nitrofigilis DSM 7299 9171971 YP_003655971.1 CDS Arnit_1810 NC_014166.1 1812405 1814174 R COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006311:IPR006179:IPR008334; KEGG: abu:Abu_0572 sulfur oxidation protein, sulfate thiol esterase; PFAM: 5'-Nucleotidase domain protein; SPTR: A8ESB5 Sulfur oxidation protein, sulfate thiol esterase; PFAM: 5'-nucleotidase, C-terminal domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; 5'-nucleotidase domain-containing protein complement(1812405..1814174) Arcobacter nitrofigilis DSM 7299 9171972 YP_003655972.1 CDS Arnit_1811 NC_014166.1 1814198 1814839 R InterPro IPR001763; KEGG: tbd:Tbd_1650 rhodanese-like protein; SMART: Rhodanese domain protein; SPTR: Q2BMW9 Rhodanese-like protein; PFAM: Rhodanese-like domain; rhodanese domain-containing protein complement(1814198..1814839) Arcobacter nitrofigilis DSM 7299 9171973 YP_003655973.1 CDS Arnit_1812 NC_014166.1 1814917 1815348 R KEGG: abu:Abu_0571 hypothetical protein; SPTR: A8ESB4 Putative uncharacterized protein; hypothetical protein complement(1814917..1815348) Arcobacter nitrofigilis DSM 7299 9171974 YP_003655974.1 CDS Arnit_1813 NC_014166.1 1815361 1816287 R InterPro IPR009056; KEGG: abu:Abu_0570 sulfur oxidation protein SoxXA, diheme cytochrome c subunit; SPTR: A8ESB3 Sulfur oxidation protein SoxXA, diheme cytochrome c subunit; sulfur oxidation diheme cytochrome c subunit SoxXA complement(1815361..1816287) Arcobacter nitrofigilis DSM 7299 9171975 YP_003655975.1 CDS Arnit_1814 NC_014166.1 1816327 1816626 R InterPro IPR014880; KEGG: abu:Abu_0569 sulfur oxidation protein SoxYZ, sulfur compound chelating protein; PFAM: Sulphur oxidation protein SoxZ; SPTR: A8ESB2 Sulfur oxidation protein SoxYZ, sulfur compound chelating protein; PFAM: Sulphur oxidation protein SoxZ; sulfur oxidation protein SoxZ complement(1816327..1816626) Arcobacter nitrofigilis DSM 7299 9171976 YP_003655976.1 CDS Arnit_1815 NC_014166.1 1816691 1817143 R COGs: COG5501 secreted protein; InterPro IPR017441:IPR016568; KEGG: abu:Abu_0568 sulfur oxidation protein SoxYZ, sulfur covalently binding protein; SPTR: A8ESB1 Sulfur oxidation protein SoxYZ, sulfur covalently binding protein; sulfur oxidation protein SoxYZ sulfur covalently binding protein SoxYZ complement(1816691..1817143) Arcobacter nitrofigilis DSM 7299 9171977 YP_003655977.1 CDS Arnit_1816 NC_014166.1 1817162 1817518 R InterPro IPR009056:IPR003088; KEGG: abu:Abu_0567 sulfur oxidation protein SoxXA, monoheme cytochrome c subunit; PFAM: cytochrome c class I; SPTR: A8ESB0 Sulfur oxidation protein SoxXA, monoheme cytochrome c subunit; PFAM: Cytochrome c; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; cytochrome c class I complement(1817162..1817518) Arcobacter nitrofigilis DSM 7299 9171978 YP_003655978.1 CDS Arnit_1817 NC_014166.1 1817529 1818617 R COGs: COG3245 Cytochrome c5; InterPro IPR002323:IPR009056:IPR003088; KEGG: abu:Abu_0566 sulfur oxidation protein SoxCD, diheme cytochrome c subunit; PFAM: cytochrome c class I; SPTR: A8ESA9 Sulfur oxidation protein SoxCD, diheme cytochrome c subunit; PFAM: Cytochrome c; cytochrome c class I complement(1817529..1818617) Arcobacter nitrofigilis DSM 7299 9171979 YP_003655979.1 CDS Arnit_1818 NC_014166.1 1818598 1819920 R COGs: COG2041 Sulfite oxidase; InterProIPR008335:IPR000572:IPR014756:IPR005066:IPR 006311:IPR017909; KEGG: abu:Abu_0565 sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; SPTR: A8ESA8 Sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; oxidoreductase molybdopterin binding protein complement(1818598..1819920) Arcobacter nitrofigilis DSM 7299 9171980 YP_003655980.1 CDS Arnit_1819 NC_014166.1 1820235 1821455 D COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR005110:IPR001453:IPR005111:IPR020817; KEGG: abu:Abu_0534 molybdenum cofactor biosynthesis protein A; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: A8ES77 Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 1820235..1821455 Arcobacter nitrofigilis DSM 7299 9171981 YP_003655981.1 CDS Arnit_1820 NC_014166.1 1821455 1821976 D KEGG: nam:NAMH_1238 hypothetical protein; SPTR: B9L5J2 Putative uncharacterized protein; hypothetical protein 1821455..1821976 Arcobacter nitrofigilis DSM 7299 9171982 YP_003655982.1 CDS Arnit_1821 NC_014166.1 1821979 1822518 R KEGG: sbn:Sbal195_4548 hypothetical protein; SPTR: A9L6C3 Putative uncharacterized protein; hypothetical protein complement(1821979..1822518) Arcobacter nitrofigilis DSM 7299 9171983 YP_003655983.1 CDS Arnit_1822 NC_014166.1 1822528 1823652 R COGs: COG0701 permease; InterPro IPR005524; KEGG: nis:NIS_0906 hypothetical protein; PFAM: permease; SPTR: A6Q3F8 Putative uncharacterized protein; PFAM: Predicted permease; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); permease complement(1822528..1823652) Arcobacter nitrofigilis DSM 7299 9171984 YP_003655984.1 CDS Arnit_1823 NC_014166.1 1823653 1824903 R COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: abu:Abu_0532 DNA recombination protein RmuC-like protein; PFAM: protein of unknown function DUF195; SPTR: A8ES75 DNA recombination protein RmuC-like protein; PFAM: RmuC family; hypothetical protein complement(1823653..1824903) Arcobacter nitrofigilis DSM 7299 9171985 YP_003655985.1 CDS Arnit_1824 NC_014166.1 1824896 1826143 R COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: abu:Abu_0531 M48 family peptidase; PFAM: peptidase M48 Ste24p; PRIAM: Ste24 endopeptidase; SPTR: A8ES74 Peptidase, M48 family; PFAM: Peptidase family M48; Ste24 endopeptidase complement(1824896..1826143) Arcobacter nitrofigilis DSM 7299 9171986 YP_003655986.1 CDS Arnit_1825 NC_014166.1 1826215 1826694 R COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: abu:Abu_0530 nuclease NucT; SPTR: A8ES73 Putative uncharacterized protein; PFAM: Archaeal transcriptional regulator TrmB; nuclease NucT complement(1826215..1826694) Arcobacter nitrofigilis DSM 7299 9171987 YP_003655987.1 CDS Arnit_1826 NC_014166.1 1826687 1827055 R COGs: COG0824 thioesterase; InterPro IPR006683:IPR008272:IPR006684; KEGG: abu:Abu_0529 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: A8ES72 Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051; tol-pal system-associated acyl-CoA thioesterase; thioesterase superfamily protein complement(1826687..1827055) Arcobacter nitrofigilis DSM 7299 9171988 YP_003655988.1 CDS Arnit_1827 NC_014166.1 1827119 1827598 R KEGG: gur:Gura_1470 hypothetical protein; SPTR: A5GE14 Putative uncharacterized protein; hypothetical protein complement(1827119..1827598) Arcobacter nitrofigilis DSM 7299 9171989 YP_003655989.1 CDS Arnit_1828 NC_014166.1 1827606 1827752 R hypothetical protein complement(1827606..1827752) Arcobacter nitrofigilis DSM 7299 9171990 YP_003655990.1 CDS Arnit_1829 NC_014166.1 1827861 1829573 R COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR016040:IPR006153:IPR003148; KEGG: app:CAP2UW1_2844 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; SPTR: Q0EYD2 Potassium efflux system protein; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: potassium efflux system protein; sodium/hydrogen exchanger complement(1827861..1829573) Arcobacter nitrofigilis DSM 7299 9171991 YP_003655991.1 CDS Arnit_1830 NC_014166.1 1829788 1830936 D COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family; InterPro IPR001670:IPR000623; KEGG: abu:Abu_0784 iron-containing NADP-dependent alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: A8ESX5 Iron-containing NADP-dependent alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1829788..1830936 Arcobacter nitrofigilis DSM 7299 9171992 YP_003655992.1 CDS Arnit_1831 NC_014166.1 1831028 1831231 R KEGG: hypothetical protein ; K10866 DNA repair protein RAD50; SPTR: Q6CUR2 KLLA0C02915p; hypothetical protein complement(1831028..1831231) Arcobacter nitrofigilis DSM 7299 9171993 YP_003655993.1 CDS Arnit_1832 NC_014166.1 1831463 1834006 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: abu:Abu_0526 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: A8ES69 Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(1831463..1834006) Arcobacter nitrofigilis DSM 7299 9171994 YP_003655994.1 CDS Arnit_1833 NC_014166.1 1834129 1835148 R COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR002345; KEGG: abu:Abu_0524 aldo/keto reductase family oxidoreductase TAS; PFAM: aldo/keto reductase; SPTR: A8ES67 Oxidoreductase Tas, aldo/keto reductase family; PFAM: Aldo/keto reductase family; aldo/keto reductase complement(1834129..1835148) Arcobacter nitrofigilis DSM 7299 9171995 YP_003655995.1 CDS Arnit_1834 NC_014166.1 1835199 1836170 R COGs: COG1275 Tellurite resistance protein and related permease; InterPro IPR004695; KEGG: abu:Abu_0523 C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; SPTR: A8ES66 C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein complement(1835199..1836170) Arcobacter nitrofigilis DSM 7299 9171996 YP_003655996.1 CDS Arnit_1835 NC_014166.1 1836202 1836414 D KEGG: tdn:Suden_0311 hypothetical protein; SPTR: Q30TT9 Putative uncharacterized protein; hypothetical protein 1836202..1836414 Arcobacter nitrofigilis DSM 7299 9171997 YP_003655997.1 CDS Arnit_1836 NC_014166.1 1836445 1837182 R COGs: COG0368 Cobalamin-5-phosphate synthase; InterPro IPR003805; KEGG: abu:Abu_2181 cobalamin (vitamin B12) synthase; PFAM: cobalamin-5-phosphate synthase CobS; SPTR: A8EWS2 Cobalamin (Vitamin B12) synthase; PFAM: Cobalamin-5-phosphate synthase; cobalamin-5-phosphate synthase CobS complement(1836445..1837182) Arcobacter nitrofigilis DSM 7299 9171998 YP_003655998.1 CDS Arnit_1837 NC_014166.1 1837175 1838569 R COGs: COG1492 Cobyric acid synthase; InterPro IPR002586:IPR011698:IPR004459:IPR017929; KEGG: aci:ACIAD1071 cobyric acid synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; SPTR: Q43989 Cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ; cobyric acid synthase CobQ complement(1837175..1838569) Arcobacter nitrofigilis DSM 7299 9171999 YP_003655999.1 CDS Arnit_1838 NC_014166.1 1838570 1839064 R COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: abu:Abu_2182 bifunctional cobinamide kinase / cobinamide phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; SPTR: A8EWS3 Bifunctional cobinamide kinase / Cobinamide phosphate guanylyltransferase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; cobalbumin biosynthesis protein complement(1838570..1839064) Arcobacter nitrofigilis DSM 7299 9172000 YP_003656000.1 CDS Arnit_1839 NC_014166.1 1839064 1839663 R COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: ppd:Ppro_1334 multiple antibiotic resistance (MarC)-related proteins; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: C2A2E2 Putative uncharacterized protein; PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427; multiple antibiotic resistance (MarC)-like protein complement(1839064..1839663) Arcobacter nitrofigilis DSM 7299 9172001 YP_003656001.1 CDS Arnit_1840 NC_014166.1 1839667 1840725 R COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR003200; KEGG: abu:Abu_2184 hypothetical protein; SPTR: A8EWS5 Putative uncharacterized protein; PFAM: Phosphoribosyltransferase; TIGRFAM: conserved hypothetical protein TIGR00303; hypothetical protein complement(1839667..1840725) Arcobacter nitrofigilis DSM 7299 9172002 YP_003656002.1 CDS Arnit_1841 NC_014166.1 1840734 1841516 R COGs: COG2334 Putative homoserine kinase type II (protein kinase fold); InterPro IPR011009:IPR002575; KEGG: emi:Emin_0858 homoserine kinase; PFAM: aminoglycoside phosphotransferase; SPTR: B6BH72 Phosphotransferase enzyme family, putative; PFAM: Phosphotransferase enzyme family; aminoglycoside phosphotransferase complement(1840734..1841516) Arcobacter nitrofigilis DSM 7299 9172003 YP_003656003.1 CDS Arnit_1842 NC_014166.1 1841516 1842139 R COGs: COG0778 Nitroreductase; InterPro IPR000415:IPR012825; KEGG: shl:Shal_0741 cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; SPTR: B6BH73 Cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; cob(II)yrinic acid a,c-diamide reductase complement(1841516..1842139) Arcobacter nitrofigilis DSM 7299 9172004 YP_003656004.1 CDS Arnit_1843 NC_014166.1 1842206 1843240 D COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR015424:IPR004839:IPR015421:IPR015422; KEGG: fma:FMG_1150 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: B6BH71 L-threonine-O-3-phosphate decarboxylase, putative; PFAM: Aminotransferase class I and II; class I and II aminotransferase 1842206..1843240 Arcobacter nitrofigilis DSM 7299 9172005 YP_003656005.1 CDS Arnit_1844 NC_014166.1 1843228 1844112 D COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB; InterPro IPR004485; KEGG: dfe:Dfer_5371 cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; SPTR: B6BH68 Cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD 1843228..1844112 Arcobacter nitrofigilis DSM 7299 9172006 YP_003656006.1 CDS Arnit_1845 NC_014166.1 1844081 1845340 R COGs: COG1797 Cobyrinic acid a c-diamide synthase; InterPro IPR011698:IPR017929; KEGG: lmf:LMOf2365_1200 cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; SPTR: Q4EKY5 Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; CobB/CobQ domain-containing glutamine amidotransferase complement(1844081..1845340) Arcobacter nitrofigilis DSM 7299 9172007 YP_003656007.1 CDS Arnit_1846 NC_014166.1 1845342 1846301 R COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: abu:Abu_1104 putative iron compound ABC transporter, permease protein; PFAM: transport system permease protein; SPTR: A8ETU0 Putative iron compound ABC transporter, permease protein; PFAM: FecCD transport family; transport system permease complement(1845342..1846301) Arcobacter nitrofigilis DSM 7299 9172008 YP_003656008.1 CDS Arnit_1847 NC_014166.1 1846298 1846996 R COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: abu:Abu_1103 putative iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETT9 Putative iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(1846298..1846996) Arcobacter nitrofigilis DSM 7299 9172009 YP_003656009.1 CDS Arnit_1848 NC_014166.1 1846980 1847813 R COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: abu:Abu_1102 putative iron compound ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein; SPTR: A8ETT8 Putative iron compound ABC transporter, periplasmic substrate-binding protein; PFAM: Periplasmic binding protein; periplasmic binding protein complement(1846980..1847813) Arcobacter nitrofigilis DSM 7299 9172010 YP_003656010.1 CDS Arnit_1849 NC_014166.1 1847813 1849711 R COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: abu:Abu_1101 TonB-dependent receptor protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: A8ETT7 TonB-dependent receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor plug complement(1847813..1849711) Arcobacter nitrofigilis DSM 7299 9172011 YP_003656011.1 CDS Arnit_1850 NC_014166.1 1849729 1849917 R KEGG: abu:Abu_1100 hypothetical protein; SPTR: A8ETT6 Putative uncharacterized protein; hypothetical protein complement(1849729..1849917) Arcobacter nitrofigilis DSM 7299 9172012 YP_003656012.1 CDS Arnit_1851 NC_014166.1 1850035 1850454 D KEGG: sun:SUN_1591 hypothetical protein; SPTR: A6QAN2 Putative uncharacterized protein; hypothetical protein 1850035..1850454 Arcobacter nitrofigilis DSM 7299 9172013 YP_003656013.1 CDS Arnit_1852 NC_014166.1 1850607 1851230 D COGs: COG0546 phosphatase; InterPro IPR005834:IPR006402:IPR006439; KEGG: abu:Abu_1097 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8ETT3 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase 1850607..1851230 Arcobacter nitrofigilis DSM 7299 9172014 YP_003656014.1 CDS Arnit_1853 NC_014166.1 1851223 1851912 R COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterProIPR020103:IPR006145:IPR018496:IPR000748:IPR 002942; KEGG: abu:Abu_1096 ribosomal small subunit pseudouridine synthase A; PFAM: pseudouridine synthase; SPTR: A8ETT2 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase family; pseudouridine synthase complement(1851223..1851912) Arcobacter nitrofigilis DSM 7299 9172015 YP_003656015.1 CDS Arnit_1854 NC_014166.1 1851946 1852608 R InterPro IPR003538:IPR006260; KEGG: nis:NIS_1422 periplasmic protein TonB; PFAM: Gram-negative tonB protein; SPTR: A6Q4X0 Periplasmic protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB family protein complement(1851946..1852608) Arcobacter nitrofigilis DSM 7299 9172016 YP_003656016.1 CDS Arnit_1855 NC_014166.1 1852608 1852988 R COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: abu:Abu_0704 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ESP5 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2; biopolymer transport protein ExbD/TolR complement(1852608..1852988) Arcobacter nitrofigilis DSM 7299 9172017 YP_003656017.1 CDS Arnit_1856 NC_014166.1 1852969 1853397 R COGs: COG0811 Biopolymer transport protein; InterPro IPR002898:IPR014172; KEGG: abu:Abu_0705 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8ESP6 Biopolymer transport protein ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2; tonB-system energizer ExbB complement(1852969..1853397) Arcobacter nitrofigilis DSM 7299 9172018 YP_003656018.1 CDS Arnit_1857 NC_014166.1 1853474 1854322 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR005467; KEGG: abu:Abu_1084 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ETS0 Two-component sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(1853474..1854322) Arcobacter nitrofigilis DSM 7299 9172019 YP_003656019.1 CDS Arnit_1858 NC_014166.1 1854312 1854968 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1083 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ETR9 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(1854312..1854968) Arcobacter nitrofigilis DSM 7299 9172020 YP_003656020.1 CDS Arnit_1859 NC_014166.1 1855059 1856822 D COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841; KEGG: tdn:Suden_0962 Na+/Pi-cotransporter; PFAM: Na+/Picotransporter; SPTR: Q30RZ1 Na+/Pi-cotransporter; PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; Na+/Picotransporter 1855059..1856822 Arcobacter nitrofigilis DSM 7299 9172021 YP_003656021.1 CDS Arnit_1860 NC_014166.1 1856809 1857042 D KEGG: abu:Abu_1079 hypothetical protein; SPTR: A8ETR5 Putative uncharacterized protein; hypothetical protein 1856809..1857042 Arcobacter nitrofigilis DSM 7299 9172022 YP_003656022.1 CDS Arnit_1861 NC_014166.1 1857035 1857499 R COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537:IPR016914; KEGG: abu:Abu_1078 RNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: A8ETR4 RNA methylase, SpoU family; PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; tRNA/rRNA methyltransferase SpoU complement(1857035..1857499) Arcobacter nitrofigilis DSM 7299 9172023 YP_003656023.1 CDS Arnit_1862 NC_014166.1 1857499 1858332 R COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR004810:IPR002376; KEGG: abu:Abu_1077 formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; SPTR: A8ETR3 Formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase complement(1857499..1858332) Arcobacter nitrofigilis DSM 7299 9172024 YP_003656024.1 CDS Arnit_1863 NC_014166.1 1858391 1859650 R COGs: COG0281 Malic enzyme; InterPro IPR016040:IPR012301:IPR012302:IPR015884; KEGG: abu:Abu_1076 NAD-dependent malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating); SPTR: A8ETR2 NAD-dependent malic enzyme; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; malate dehydrogenase complement(1858391..1859650) Arcobacter nitrofigilis DSM 7299 9172025 YP_003656025.1 CDS Arnit_1864 NC_014166.1 1859800 1860471 R COGs: COG1496 conserved hypothetical protein; InterPro IPR011324:IPR003730; KEGG: abu:Abu_1075 hypothetical protein; PFAM: protein of unknown function DUF152; SPTR: A8ETR1 Putative uncharacterized protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726; hypothetical protein complement(1859800..1860471) Arcobacter nitrofigilis DSM 7299 9172026 YP_003656026.1 CDS Arnit_1865 NC_014166.1 1860571 1861380 D COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR016040:IPR013708:IPR006151:IPR011342; KEGG: abu:Abu_1073 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: A8ETQ9 Shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 1860571..1861380 Arcobacter nitrofigilis DSM 7299 9172027 YP_003656027.1 CDS Arnit_1866 NC_014166.1 1861399 1862292 R InterPro IPR000297; KEGG: nis:NIS_0561 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: A6Q2G6 Peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1861399..1862292) Arcobacter nitrofigilis DSM 7299 9172028 YP_003656028.1 CDS Arnit_1867 NC_014166.1 1862357 1863706 R InterPro IPR011031; KEGG: ccv:CCV52592_0434 hydroxylamine oxidase; SPTR: C8PH55 Hydroxylamine oxidase; PFAM: NapC/NirT cytochrome c family, N-terminal region; hydroxylamine oxidase complement(1862357..1863706) Arcobacter nitrofigilis DSM 7299 9172029 YP_003656029.1 CDS Arnit_1868 NC_014166.1 1863732 1864277 R COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR005126:IPR011031; KEGG: cff:CFF8240_0799 putative tetraheme cytochrome c; PFAM: NapC/NirT cytochrome c domain protein; SPTR: A0RP41 Putative tetraheme Cytochrome c; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit; NapC/NirT cytochrome c domain-containing protein complement(1863732..1864277) Arcobacter nitrofigilis DSM 7299 9172030 YP_003656030.1 CDS Arnit_1869 NC_014166.1 1864728 1865318 D InterPro IPR019758; KEGG: abu:Abu_1069 hypothetical protein; SPTR: A8ETQ5 Conserved hypothetical lipoprotein; hypothetical protein 1864728..1865318 Arcobacter nitrofigilis DSM 7299 9172031 YP_003656031.1 CDS Arnit_1870 NC_014166.1 1865371 1866549 D COGs: COG0754 Glutathionylspermidine synthase; InterPro IPR005494; KEGG: abu:Abu_1068 glutathionylspermidine synthase family protein; PFAM: glutathionylspermidine synthase; SPTR: A8ETQ4 Glutathionylspermidine synthase family protein; PFAM: Glutathionylspermidine synthase; glutathionylspermidine synthase 1865371..1866549 Arcobacter nitrofigilis DSM 7299 9172032 YP_003656032.1 CDS Arnit_1871 NC_014166.1 1866576 1868612 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003661:IPR003594:IPR009082:IPR 013163:IPR005467; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EV12 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(1866576..1868612) Arcobacter nitrofigilis DSM 7299 9172033 YP_003656033.1 CDS Arnit_1872 NC_014166.1 1868676 1869146 R KEGG: son:SO_4333 hypothetical protein; SPTR: Q8E9F1 Putative uncharacterized protein; hypothetical protein complement(1868676..1869146) Arcobacter nitrofigilis DSM 7299 9172034 YP_003656034.1 CDS Arnit_1873 NC_014166.1 1869143 1870102 R COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; InterPro IPR003758; KEGG: abu:Abu_1248 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: A8EU81 Tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase complement(1869143..1870102) Arcobacter nitrofigilis DSM 7299 9172035 YP_003656035.1 CDS Arnit_1874 NC_014166.1 1870106 1871242 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR000653:IPR015421:IPR015422; KEGG: abu:Abu_1249 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8EU82 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; DegT/DnrJ/EryC1/StrS aminotransferase complement(1870106..1871242) Arcobacter nitrofigilis DSM 7299 9172036 YP_003656036.1 CDS Arnit_1875 NC_014166.1 1871244 1872002 R COGs: COG0171 NAD synthase; InterPro IPR003694:IPR014729; KEGG: abu:Abu_1250 NH(3)-dependent NAD+ synthetase; PFAM: NAD synthase; PRIAM: NAD(+) synthase; SPTR: A8EU83 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; NAD+ synthetase complement(1871244..1872002) Arcobacter nitrofigilis DSM 7299 9172037 YP_003656037.1 CDS Arnit_1876 NC_014166.1 1872023 1872238 R KEGG: abu:Abu_1251 hypothetical protein; SPTR: A8EU84 Putative uncharacterized protein; hypothetical protein complement(1872023..1872238) Arcobacter nitrofigilis DSM 7299 9172038 YP_003656038.1 CDS Arnit_1877 NC_014166.1 1872238 1872471 R InterPro IPR007419; KEGG: abu:Abu_1252 hypothetical protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: A8EU85 Putative uncharacterized protein; PFAM: BFD-like [2Fe-2S] binding domain; BFD (2Fe-2S)-binding domain-containing protein complement(1872238..1872471) Arcobacter nitrofigilis DSM 7299 9172039 YP_003656039.1 CDS Arnit_1878 NC_014166.1 1872464 1872694 R InterPro IPR007419; KEGG: abu:Abu_1252 hypothetical protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: A8EU85 Putative uncharacterized protein; PFAM: BFD-like [2Fe-2S] binding domain; BFD (2Fe-2S)-binding domain-containing protein complement(1872464..1872694) Arcobacter nitrofigilis DSM 7299 9172040 YP_003656040.1 CDS Arnit_1879 NC_014166.1 1872695 1873450 R InterPro IPR001623; KEGG: abu:Abu_1253 DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8EU86 DnaJ domain protein; PFAM: DnaJ domain; Tellurite resistance protein TerB; heat shock protein DnaJ domain-containing protein complement(1872695..1873450) Arcobacter nitrofigilis DSM 7299 9172041 YP_003656041.1 CDS Arnit_1880 NC_014166.1 1873533 1873991 D InterPro IPR003998:IPR003369:IPR018448; KEGG: abu:Abu_1255 hypothetical protein; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: A8EU88 Conserved hypothetical membrane protein; TIGRFAM: twin-arginine translocation protein, TatB subunit; TIGRFAM: twin arginine-targeting protein translocase TatB; twin-arginine translocation protein TatB subunit 1873533..1873991 Arcobacter nitrofigilis DSM 7299 9172042 YP_003656042.1 CDS Arnit_1881 NC_014166.1 1873991 1874722 D COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR002033:IPR019820:IPR019822; KEGG: abu:Abu_1256 sec-independent protein secretion pathway component TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: A8EU89 Sec-independent protein secretion pathway component TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; Sec-independent protein translocase subunit TatC 1873991..1874722 Arcobacter nitrofigilis DSM 7299 9172043 YP_003656043.1 CDS Arnit_1882 NC_014166.1 1874709 1875746 D COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: abu:Abu_1257 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: A8EU90 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 1874709..1875746 Arcobacter nitrofigilis DSM 7299 9172044 YP_003656044.1 CDS Arnit_1883 NC_014166.1 1875763 1876521 D COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055:IPR012337:IPR013520; KEGG: abu:Abu_1258 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: A8EU91 DNA polymerase III, epsilon subunit; PFAM: Exonuclease; exonuclease RNase T and DNA polymerase III 1875763..1876521 Arcobacter nitrofigilis DSM 7299 9172045 YP_003656045.1 CDS Arnit_1884 NC_014166.1 1876508 1877188 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1762 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EVN5 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator receiver protein 1876508..1877188 Arcobacter nitrofigilis DSM 7299 9172046 YP_003656046.1 CDS Arnit_1885 NC_014166.1 1877181 1878497 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR004358:IPR003594:IPR005467; KEGG: abu:Abu_1761 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EVN4 Sensor protein; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 1877181..1878497 Arcobacter nitrofigilis DSM 7299 9172047 YP_003656047.1 CDS Arnit_1886 NC_014166.1 1878499 1879803 R COGs: COG0348 Polyferredoxin; InterPro IPR017900:IPR014116:IPR017896; KEGG: abu:Abu_1760 ferredoxin-like protein; SPTR: A8EVN3 Ferredoxin-like protein; TIGRFAM: cytochrome c oxidase accessory protein CcoG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; cytochrome c oxidase accessory protein CcoG complement(1878499..1879803) Arcobacter nitrofigilis DSM 7299 9172048 YP_003656048.1 CDS Arnit_1887 NC_014166.1 1880004 1881338 D COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: wsu:WS0746 transmembrane transport protein; PFAM: sodium:neurotransmitter symporter; SPTR: Q7M9R0 Transporter; PFAM: Sodium:neurotransmitter symporter family; sodium:neurotransmitter symporter 1880004..1881338 Arcobacter nitrofigilis DSM 7299 9172049 YP_003656049.1 CDS Arnit_1888 NC_014166.1 1881360 1882595 R InterPro IPR004477; KEGG: abu:Abu_1260 competence locus E; PFAM: ComEC/Rec2-related protein; SPTR: A8EU93 Competence locus E; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein complement(1881360..1882595) Arcobacter nitrofigilis DSM 7299 9172050 YP_003656050.1 CDS Arnit_1889 NC_014166.1 1882644 1884737 R COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR013217; KEGG: abu:Abu_1262 hypothetical protein; PFAM: protein of unknown function DUF323; Methyltransferase type 12; SPTR: A8EU95 Putative uncharacterized protein; PFAM: Methyltransferase domain; Formylglycine-generating sulfatase enzyme; hypothetical protein complement(1882644..1884737) Arcobacter nitrofigilis DSM 7299 9172051 YP_003656051.1 CDS Arnit_1890 NC_014166.1 1884825 1885895 R COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: tcx:Tcr_1009 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Q31GW9 ADP-ribosylglycohydrolase family protein; PFAM: ADP-ribosylglycohydrolase; ADP-ribosylation/crystallin J1 complement(1884825..1885895) Arcobacter nitrofigilis DSM 7299 9172052 YP_003656052.1 CDS Arnit_1891 NC_014166.1 1885967 1886446 R COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: abu:Abu_0364 S-adenosylmethionine:2-demethylmenaquinone methyltransferase; PFAM: Dimethylmenaquinone methyltransferase; SPTR: B6BJG0 Regulator of ribonuclease activity A; PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy; dimethylmenaquinone methyltransferase complement(1885967..1886446) Arcobacter nitrofigilis DSM 7299 9172053 YP_003656053.1 CDS Arnit_1892 NC_014166.1 1886459 1887481 R COGs: COG2008 Threonine aldolase; InterPro IPR015424:IPR001597:IPR015421:IPR015422; KEGG: dps:DP1003 low-specificity L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: Q6APJ2 Probable low-specificity L-threonine aldolase; PFAM: Beta-eliminating lyase; threonine aldolase complement(1886459..1887481) Arcobacter nitrofigilis DSM 7299 9172054 YP_003656054.1 CDS Arnit_1893 NC_014166.1 1887493 1888185 R COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: abu:Abu_0912 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: A8ET98 Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1887493..1888185) Arcobacter nitrofigilis DSM 7299 9172055 YP_003656055.1 CDS Arnit_1894 NC_014166.1 1888286 1888696 D COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding); InterPro IPR006158; KEGG: sun:SUN_1085 methylaspartate mutase subunit S; PFAM: cobalamin B12-binding domain protein; SPTR: B7RTT7 B12 binding domain, putative; PFAM: B12 binding domain; TIGRFAM: methylaspartate mutase, S subunit; cobalamin B12-binding domain-containing protein 1888286..1888696 Arcobacter nitrofigilis DSM 7299 9172056 YP_003656056.1 CDS Arnit_1895 NC_014166.1 1888693 1890057 D COGs: COG4865 Glutamate mutase epsilon subunit; InterPro IPR016176:IPR006396:IPR014348; KEGG: sun:SUN_1086 methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit; PRIAM: Methylaspartate mutase; SPTR: B7RTT8 Methylaspartate mutase E chain (MutE) superfamily protein; PFAM: Methylaspartate mutase E chain (MutE); TIGRFAM: methylaspartate mutase, E subunit; methylaspartate mutase 1888693..1890057 Arcobacter nitrofigilis DSM 7299 9172057 YP_003656057.1 CDS Arnit_1896 NC_014166.1 1890054 1891244 D KEGG: sun:SUN_1087 hypothetical protein; SPTR: B6BJF7 Putative uncharacterized protein; hypothetical protein 1890054..1891244 Arcobacter nitrofigilis DSM 7299 9172058 YP_003656058.1 CDS Arnit_1897 NC_014166.1 1891255 1892832 D COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: sun:SUN_1088 hypothetical protein; PFAM: AMP-dependent synthetase and ligase; SPTR: B6BJF6 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; AMP-dependent synthetase and ligase 1891255..1892832 Arcobacter nitrofigilis DSM 7299 9172059 YP_003656059.1 CDS Arnit_1898 NC_014166.1 1892966 1893241 D COGs: COG2863 Cytochrome c553; InterPro IPR009056; KEGG: abu:Abu_1316 putative cytochrome c; SPTR: A8EUE9 Putative uncharacterized protein; PFAM: Cytochrome c; putative cytochrome c 1892966..1893241 Arcobacter nitrofigilis DSM 7299 9172060 YP_003656060.1 CDS Arnit_1899 NC_014166.1 1893389 1893664 D InterPro IPR009056; KEGG: abu:Abu_1316 putative cytochrome c; SPTR: A8EUE9 Putative uncharacterized protein; PFAM: Cytochrome c; putative cytochrome c 1893389..1893664 Arcobacter nitrofigilis DSM 7299 9172061 YP_003656061.1 CDS Arnit_1900 NC_014166.1 1893739 1896033 D COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: abu:Abu_1273 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A8EUA6 EAL/GGDEF domain protein; PFAM: EAL domain; GGDEF domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; diguanylate cyclase/phosphodiesterase 1893739..1896033 Arcobacter nitrofigilis DSM 7299 9172062 YP_003656062.1 CDS Arnit_1901 NC_014166.1 1896019 1896861 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_1317 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A6C9P7 Probable response regulatory protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1896019..1896861) Arcobacter nitrofigilis DSM 7299 9172063 YP_003656063.1 CDS Arnit_1902 NC_014166.1 1896983 1898290 D InterPro IPR000064; KEGG: abu:Abu_1318 hypothetical protein; PFAM: NLP/P60 protein; SPTR: A8EUF1 Putative uncharacterized protein; PFAM: NlpC/P60 family; NLP/P60 protein 1896983..1898290 Arcobacter nitrofigilis DSM 7299 9172064 YP_003656064.1 CDS Arnit_1903 NC_014166.1 1898295 1901378 R COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: tdn:Suden_0799 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Q30SF3 Resistance-Nodulation-Cell Division Superfamily transporter; PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein complement(1898295..1901378) Arcobacter nitrofigilis DSM 7299 9172065 YP_003656065.1 CDS Arnit_1904 NC_014166.1 1901375 1901629 R KEGG: abu:Abu_1319 hypothetical protein; SPTR: A8EUF2 Putative uncharacterized protein; hypothetical protein complement(1901375..1901629) Arcobacter nitrofigilis DSM 7299 9172066 YP_003656066.1 CDS Arnit_1905 NC_014166.1 1901622 1902524 R COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: abu:Abu_1320 S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; SPTR: A8EUF3 S-adenosyl-L-methionine-dependent methyltransferase mraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(1901622..1902524) Arcobacter nitrofigilis DSM 7299 9172067 YP_003656067.1 CDS Arnit_1906 NC_014166.1 1902585 1903160 D InterPro IPR001303; KEGG: abu:Abu_1321 hypothetical protein; PFAM: class II aldolase/adducin family protein; SPTR: A8EUF4 Putative uncharacterized protein; PFAM: Class II Aldolase and Adducin N-terminal domain; class II aldolase/adducin family protein 1902585..1903160 Arcobacter nitrofigilis DSM 7299 9172068 YP_003656068.1 CDS Arnit_1907 NC_014166.1 1903288 1903563 D COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR010992:IPR018727:IPR017441; KEGG: abu:Abu_1322 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; Protein of unknown function DUF2267; SMART: histone family protein DNA-binding protein; SPTR: A8EUF5 DNA-binding protein HU; PFAM: Bacterial DNA-binding protein; histone family protein DNA-binding protein 1903288..1903563 Arcobacter nitrofigilis DSM 7299 9172069 YP_003656069.1 CDS Arnit_1908 NC_014166.1 1903624 1904181 R InterPro IPR008816; KEGG: abu:Abu_1111 hypothetical protein; PFAM: 17 kDa surface antigen; SPTR: A8ETU7 Putative uncharacterized protein; 17 kDa surface antigen complement(1903624..1904181) Arcobacter nitrofigilis DSM 7299 9172070 YP_003656070.1 CDS Arnit_1909 NC_014166.1 1904222 1904527 R COGs: COG2863 Cytochrome c553; InterPro IPR008168:IPR009056:IPR003088; KEGG: abu:Abu_1919 cytochrome c; PFAM: cytochrome c class I; SPTR: B6BHK9 Cytochrome c, class I; PFAM: Cytochrome c; cytochrome c class I complement(1904222..1904527) Arcobacter nitrofigilis DSM 7299 9172071 YP_003656071.1 CDS Arnit_1910 NC_014166.1 1904600 1904932 R KEGG: abu:Abu_1110 hypothetical protein; SPTR: A8ETU6 Putative uncharacterized protein; hypothetical protein complement(1904600..1904932) Arcobacter nitrofigilis DSM 7299 9172072 YP_003656072.1 CDS Arnit_1911 NC_014166.1 1904926 1906110 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR009082:IPR005467; KEGG: abu:Abu_1109 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ETU5 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(1904926..1906110) Arcobacter nitrofigilis DSM 7299 9172073 YP_003656073.1 CDS Arnit_1912 NC_014166.1 1906073 1906744 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1108 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BHK7 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(1906073..1906744) Arcobacter nitrofigilis DSM 7299 9172074 YP_003656074.1 CDS Arnit_1913 NC_014166.1 1906747 1906974 R KEGG: abu:Abu_1107 hypothetical protein; SPTR: A8ETU3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1104); hypothetical protein complement(1906747..1906974) Arcobacter nitrofigilis DSM 7299 9172075 YP_003656075.1 CDS Arnit_1914 NC_014166.1 1907171 1907944 D KEGG: cjd:JJD26997_0694 hypothetical protein; SPTR: C8PIL8 Putative uncharacterized protein; hypothetical protein 1907171..1907944 Arcobacter nitrofigilis DSM 7299 9172076 YP_003656076.1 CDS Arnit_1915 NC_014166.1 1907982 1908272 D KEGG: cak:Caul_1030 hypothetical protein; SPTR: C6X810 Putative uncharacterized protein; hypothetical protein 1907982..1908272 Arcobacter nitrofigilis DSM 7299 9172077 YP_003656077.1 CDS Arnit_1916 NC_014166.1 1908619 1909146 R COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR004564; KEGG: abu:Abu_1309 outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: A8EUE2 Outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(1908619..1909146) Arcobacter nitrofigilis DSM 7299 9172079 YP_003656078.1 CDS Arnit_1917 NC_014166.1 1909204 1911816 D COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR000185:IPR001650:IPR011116:IPR011130:IPR 011115:IPR004027:IPR014018; KEGG: abu:Abu_1310 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SEC-C motif domain protein; SMART: helicase domain protein; SPTR: A8EUE3 Protein translocase subunit secA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; Helicase conserved C-terminal domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; preprotein translocase subunit SecA 1909204..1911816 Arcobacter nitrofigilis DSM 7299 9172080 YP_003656079.1 CDS Arnit_1918 NC_014166.1 1911818 1913026 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: abu:Abu_1311 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: A8EUE4 Conserved hypothetical integral membrane protein; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; hypothetical protein 1911818..1913026 Arcobacter nitrofigilis DSM 7299 9172081 YP_003656080.1 CDS Arnit_1919 NC_014166.1 1913031 1915823 R KEGG: abu:Abu_1312 hypothetical protein; SPTR: A8EUE5 Putative uncharacterized protein; hypothetical protein complement(1913031..1915823) Arcobacter nitrofigilis DSM 7299 9172082 YP_003656081.1 CDS Arnit_1920 NC_014166.1 1915825 1916913 D COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: abu:Abu_1313 4-amino-4-deoxychorismate lyase PabC; PFAM: aminodeoxychorismate lyase; SPTR: A8EUE6 4-amino-4-deoxychorismate lyase PabC; PFAM: YceG-like family; aminodeoxychorismate lyase 1915825..1916913 Arcobacter nitrofigilis DSM 7299 9172083 YP_003656082.1 CDS Arnit_1921 NC_014166.1 1917034 1919226 D COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: abu:Abu_1314 isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: A8EUE7 Isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; isocitrate dehydrogenase 1917034..1919226 Arcobacter nitrofigilis DSM 7299 9172084 YP_003656083.1 CDS Arnit_1922 NC_014166.1 1919301 1920248 D COGs: COG0039 Malate/lactate dehydrogenase; InterProIPR001557:IPR015955:IPR016040:IPR001236:IPR 011275; KEGG: abu:Abu_1315 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; PRIAM: L-lactate dehydrogenase; SPTR: A8EUE8 Malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; malate dehydrogenase 1919301..1920248 Arcobacter nitrofigilis DSM 7299 9172085 YP_003656084.1 CDS Arnit_1923 NC_014166.1 1920349 1920729 D KEGG: spl:Spea_1548 hypothetical protein; SPTR: A8H2T6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3478); hypothetical protein 1920349..1920729 Arcobacter nitrofigilis DSM 7299 9172086 YP_003656085.1 CDS Arnit_1924 NC_014166.1 1920758 1921819 R COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: dat:HRM2_37860 DraG2; PFAM: ADP-ribosylation/Crystallin J1; SPTR: B6BJW2 ADP-ribosylglycohydrolase family protein, putative; PFAM: ADP-ribosylglycohydrolase; ADP-ribosylation/crystallin J1 complement(1920758..1921819) Arcobacter nitrofigilis DSM 7299 9172087 YP_003656086.1 CDS Arnit_1925 NC_014166.1 1921895 1922470 R COGs: COG0605 Superoxide dismutase; InterPro IPR001189:IPR019832:IPR019831:IPR019833; KEGG: abu:Abu_1576 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: A8EV51 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; Superoxide dismutase complement(1921895..1922470) Arcobacter nitrofigilis DSM 7299 9172088 YP_003656087.1 CDS Arnit_1926 NC_014166.1 1922615 1923205 R KEGG: abu:Abu_1355 hypothetical protein; SPTR: A8EUI7 Putative uncharacterized protein; hypothetical protein complement(1922615..1923205) Arcobacter nitrofigilis DSM 7299 9172089 YP_003656088.1 CDS Arnit_1927 NC_014166.1 1923273 1924430 R COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: abu:Abu_1356 D-amino acid oxidase domain-containing protein; PFAM: FAD dependent oxidoreductase; SPTR: A8EUI8 D-amino acid oxidase domain protein; PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(1923273..1924430) Arcobacter nitrofigilis DSM 7299 9172090 YP_003656089.1 CDS Arnit_1928 NC_014166.1 1924417 1924764 R KEGG: abu:Abu_1357 hypothetical protein; SPTR: A8EUI9 Putative uncharacterized protein; hypothetical protein complement(1924417..1924764) Arcobacter nitrofigilis DSM 7299 9172091 YP_003656090.1 CDS Arnit_1929 NC_014166.1 1924898 1925776 D COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR003095:IPR001623:IPR008971:IPR002939:IPR 018253; KEGG: abu:Abu_1361 curved DNA-binding protein CbpA; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8EUJ3 Curved DNA-binding protein CbpA; PFAM: DnaJ C terminal region; DnaJ domain; heat shock protein DnaJ domain-containing protein 1924898..1925776 Arcobacter nitrofigilis DSM 7299 9172092 YP_003656091.1 CDS Arnit_1930 NC_014166.1 1925788 1926168 D InterPro IPR000551:IPR009061; KEGG: abu:Abu_1362 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: A8EUJ4 Transcriptional regulator (MerR family), putative heat shock regulator HspR; PFAM: MerR family regulatory protein; MerR family transcriptional regulator 1925788..1926168 Arcobacter nitrofigilis DSM 7299 9172093 YP_003656092.1 CDS Arnit_1931 NC_014166.1 1926177 1927313 R COGs: COG0206 Cell division GTPase; InterProIPR000158:IPR019746:IPR008280:IPR003008:IPR 018316; KEGG: abu:Abu_1379 cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: A8EUL0 Cell division protein ftsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ complement(1926177..1927313) Arcobacter nitrofigilis DSM 7299 9172094 YP_003656093.1 CDS Arnit_1932 NC_014166.1 1927313 1928701 R COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494:IPR020823; KEGG: abu:Abu_1380 cell division protein FtsA; PFAM: cell division protein FtsA; SPTR: A8EUL1 Cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; cell division protein FtsA complement(1927313..1928701) Arcobacter nitrofigilis DSM 7299 9172095 YP_003656094.1 CDS Arnit_1933 NC_014166.1 1928705 1930171 R KEGG: abu:Abu_1381 hypothetical protein; SPTR: A8EUL2 Conserved hypothetical membrane protein; hypothetical protein complement(1928705..1930171) Arcobacter nitrofigilis DSM 7299 9172096 YP_003656095.1 CDS Arnit_1934 NC_014166.1 1930240 1932522 R COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003593:IPR010994; KEGG: abu:Abu_1382 exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase; SPTR: A8EUL3 Exodeoxyribonuclease V, alpha subunit; PFAM: Viral (Superfamily 1) RNA helicase; TIGRFAM: helicase, putative, RecD/TraA family; AAA ATPase complement(1930240..1932522) Arcobacter nitrofigilis DSM 7299 9172097 YP_003656096.1 CDS Arnit_1935 NC_014166.1 1932522 1932878 R KEGG: abu:Abu_1383 hypothetical protein; SPTR: A8EUL4 Putative uncharacterized protein; hypothetical protein complement(1932522..1932878) Arcobacter nitrofigilis DSM 7299 9172098 YP_003656097.1 CDS Arnit_1936 NC_014166.1 1932878 1933225 R COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR012336:IPR006660:IPR012335:IPR006659; KEGG: sun:SUN_1478 arsenate reductase; PFAM: arsenate reductase and related; SPTR: A6QAC0 Arsenate reductase; TIGRFAM: arsenate reductase; PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); arsenate reductase complement(1932878..1933225) Arcobacter nitrofigilis DSM 7299 9172099 YP_003656098.1 CDS Arnit_1937 NC_014166.1 1933304 1935388 D KEGG: abu:Abu_1388 hypothetical protein; SPTR: A8EUL9 Conserved hypothetical membrane protein; PFAM: Flagellar hook-length control protein FliK; hypothetical protein 1933304..1935388 Arcobacter nitrofigilis DSM 7299 9172100 YP_003656099.1 CDS Arnit_1938 NC_014166.1 1935390 1935665 D COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; InterPro IPR006135; KEGG: abu:Abu_1389 FlhB domain-containing protein; PFAM: type III secretion exporter; SPTR: A8EUM0 FlhB domain protein; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein; type III secretion exporter 1935390..1935665 Arcobacter nitrofigilis DSM 7299 9172101 YP_003656100.1 CDS Arnit_1939 NC_014166.1 1935731 1936171 D KEGG: abu:Abu_0997 hypothetical protein; SPTR: A8ETI3 Putative uncharacterized protein; hypothetical protein 1935731..1936171 Arcobacter nitrofigilis DSM 7299 9172102 YP_003656101.1 CDS Arnit_1940 NC_014166.1 1936168 1937952 D COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR001460:IPR017790; KEGG: abu:Abu_0996 penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: A8ETI2 Penicillin-binding protein; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; penicillin-binding protein 2 1936168..1937952 Arcobacter nitrofigilis DSM 7299 9172103 YP_003656102.1 CDS Arnit_1941 NC_014166.1 1937955 1939211 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090:IPR004089; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(1937955..1939211) Arcobacter nitrofigilis DSM 7299 9172104 YP_003656103.1 CDS Arnit_1942 NC_014166.1 1939225 1939608 R InterPro IPR013655:IPR000014; KEGG: tdn:Suden_1652 putative PAS/PAC sensor protein; PFAM: PAS fold-3 domain protein; SPTR: B6BJB5 Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; putative PAS/PAC sensor protein complement(1939225..1939608) Arcobacter nitrofigilis DSM 7299 9172105 YP_003656104.1 CDS Arnit_1943 NC_014166.1 1939761 1940510 R COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: nam:NAMH_0588 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: B9L8P6 Extracellular solute-binding protein, family 3; PFAM: Bacterial extracellular solute-binding proteins, family 3; family 3 extracellular solute-binding protein complement(1939761..1940510) Arcobacter nitrofigilis DSM 7299 9172106 YP_003656105.1 CDS Arnit_1944 NC_014166.1 1940651 1941379 D COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838:IPR005837; KEGG: abu:Abu_0995 flagellar biosynthesis protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: A8ETI1 Flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; flagellar biosynthetic protein FliP 1940651..1941379 Arcobacter nitrofigilis DSM 7299 9172107 YP_003656106.1 CDS Arnit_1945 NC_014166.1 1941561 1943468 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013163; KEGG: abu:Abu_1984 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EW83 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer 1941561..1943468 Arcobacter nitrofigilis DSM 7299 9172108 YP_003656107.1 CDS Arnit_1946 NC_014166.1 1943478 1943882 D InterPro IPR013655:IPR000014; KEGG: abu:Abu_0960 methyl-accepting chemotaxis protein; PFAM: PAS fold-3 domain protein; SPTR: A8ETE6 Methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; putative PAS/PAC sensor protein 1943478..1943882 Arcobacter nitrofigilis DSM 7299 9172109 YP_003656108.1 CDS Arnit_1947 NC_014166.1 1943996 1945345 D COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0993 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A8ETH9 Outer membrane efflux protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein 1943996..1945345 Arcobacter nitrofigilis DSM 7299 9172110 YP_003656109.1 CDS Arnit_1948 NC_014166.1 1945488 1946804 D InterPro IPR013105:IPR011990:IPR019734:IPR013026; KEGG: abu:Abu_0929 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: A8ETB5 Putative uncharacterized protein; hypothetical protein 1945488..1946804 Arcobacter nitrofigilis DSM 7299 9172111 YP_003656110.1 CDS Arnit_1949 NC_014166.1 1946814 1948259 D KEGG: abu:Abu_0930 hypothetical protein; SPTR: A8ETB6 Putative uncharacterized protein; PFAM: FecR protein; hypothetical protein 1946814..1948259 Arcobacter nitrofigilis DSM 7299 9172112 YP_003656111.1 CDS Arnit_1950 NC_014166.1 1948265 1948726 R COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR016181:IPR000182; KEGG: abu:Abu_0982 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: A8ETG8 Acetyltransferase, GNAT Family; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(1948265..1948726) Arcobacter nitrofigilis DSM 7299 9172113 YP_003656112.1 CDS Arnit_1951 NC_014166.1 1948716 1949324 R COGs: COG0218 GTPase; InterPro IPR002917:IPR019987; KEGG: abu:Abu_0981 putative ATP/GTP binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: A8ETG7 Probable GTP-binding protein engB; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; ribosome biogenesis GTP-binding protein YsxC complement(1948716..1949324) Arcobacter nitrofigilis DSM 7299 9172114 YP_003656113.1 CDS Arnit_1952 NC_014166.1 1949321 1949863 R COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: abu:Abu_0980 OstA family protein; PFAM: OstA family protein; SPTR: A8ETG6 OstA family protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; lipopolysaccharide transport periplasmic protein LptA complement(1949321..1949863) Arcobacter nitrofigilis DSM 7299 9172115 YP_003656114.1 CDS Arnit_1953 NC_014166.1 1949860 1950390 R InterPro IPR010664; KEGG: abu:Abu_0979 hypothetical protein; PFAM: protein of unknown function DUF1239; SPTR: A8ETG5 Putative uncharacterized protein; hypothetical protein complement(1949860..1950390) Arcobacter nitrofigilis DSM 7299 9172116 YP_003656115.1 CDS Arnit_1954 NC_014166.1 1950381 1950878 R COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR013200:IPR010023:IPR006549; KEGG: abu:Abu_0978 HAD-superfamily phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: A8ETG4 HAD-superfamily hydrolase subfamily IIIA:Phosphatase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(1950381..1950878) Arcobacter nitrofigilis DSM 7299 9172117 YP_003656116.1 CDS Arnit_1955 NC_014166.1 1950875 1951447 R COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR020568:IPR000807:IPR020565; KEGG: abu:Abu_0977 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: A8ETG3 Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase complement(1950875..1951447) Arcobacter nitrofigilis DSM 7299 9172118 YP_003656117.1 CDS Arnit_1956 NC_014166.1 1951459 1952268 R COGs: COG0797 Lipoprotein; InterPro IPR009009:IPR005132:IPR007730:IPR012997; KEGG: nis:NIS_0776 hypothetical protein; PFAM: Rare lipoprotein A; Sporulation domain protein; SPTR: A6Q329 Putative uncharacterized protein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; rare lipoprotein A complement(1951459..1952268) Arcobacter nitrofigilis DSM 7299 9172119 YP_003656118.1 CDS Arnit_1957 NC_014166.1 1952249 1953625 R InterPro IPR002482:IPR008258:IPR018392; KEGG: nam:NAMH_1200 regulatory protein DniR; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: B6BJH7 Lytic transglycosylase, catalytic; PFAM: Transglycosylase SLT domain; LysM domain; lytic transglycosylase catalytic subunit complement(1952249..1953625) Arcobacter nitrofigilis DSM 7299 9172120 YP_003656119.1 CDS Arnit_1958 NC_014166.1 1953663 1954451 R COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR012278:IPR018228:IPR015991; KEGG: abu:Abu_0974 TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: A8ETG0 TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase complement(1953663..1954451) Arcobacter nitrofigilis DSM 7299 9172121 YP_003656120.1 CDS Arnit_1959 NC_014166.1 1954448 1954750 R KEGG: abu:Abu_0973 hypothetical protein; SPTR: A8ETF9 Putative uncharacterized protein; hypothetical protein complement(1954448..1954750) Arcobacter nitrofigilis DSM 7299 9172122 YP_003656121.1 CDS Arnit_1960 NC_014166.1 1954806 1956134 R COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR003593:IPR013093:IPR004491; KEGG: abu:Abu_0972 ATP-dependent protease ATP-binding subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; SPTR: A8ETF8 Heat shock protein HslVU, ATP-dependent protease subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; heat shock protein HslVU ATPase HslU complement(1954806..1956134) Arcobacter nitrofigilis DSM 7299 9172123 YP_003656122.1 CDS Arnit_1961 NC_014166.1 1956140 1956676 R COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: abu:Abu_0971 ATP-dependent protease peptidase subunit; PFAM: 20S proteasome A and B subunits; SPTR: A8ETF7 ATP-dependent protease hslV; PFAM: Proteasome subunit; 20S proteasome subunits AB complement(1956140..1956676) Arcobacter nitrofigilis DSM 7299 9172124 YP_003656123.1 CDS Arnit_1962 NC_014166.1 1956680 1957126 R COGs: COG0359 Ribosomal protein L9; InterPro IPR020069:IPR009027:IPR020070:IPR020594; KEGG: abu:Abu_0970 50S ribosomal protein L9; PFAM: Ribosomal protein L9-like; SPTR: A8ETF6 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 complement(1956680..1957126) Arcobacter nitrofigilis DSM 7299 9172125 YP_003656124.1 CDS Arnit_1963 NC_014166.1 1957211 1957852 R COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119; KEGG: abu:Abu_0969 resolvase family site-specific recombinase; PFAM: Resolvase domain; SPTR: A8ETF5 Site-specific recombinase, resolvase family; PFAM: Resolvase, N terminal domain; resolvase domain-containing protein complement(1957211..1957852) Arcobacter nitrofigilis DSM 7299 9172126 YP_003656125.1 CDS Arnit_1964 NC_014166.1 1958088 1958648 D COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR003382:IPR004507; KEGG: abu:Abu_0968 phenylacrylic acid decarboxylase; PFAM: flavoprotein; SPTR: A8ETF4 Phenylacrylic acid decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1958088..1958648 Arcobacter nitrofigilis DSM 7299 9172127 YP_003656126.1 CDS Arnit_1965 NC_014166.1 1958641 1959135 D COGs: COG0669 Phosphopantetheine adenylyltransferase; InterPro IPR001980:IPR004820:IPR014729:IPR004821; KEGG: abu:Abu_0967 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: A8ETF3 Phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; pantetheine-phosphate adenylyltransferase 1958641..1959135 Arcobacter nitrofigilis DSM 7299 9172128 YP_003656127.1 CDS Arnit_1966 NC_014166.1 1959126 1959692 D COGs: COG0125 Thymidylate kinase; InterPro IPR000062:IPR018095:IPR018094; KEGG: abu:Abu_0966 thymidylate kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: A8ETF2 Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase 1959126..1959692 Arcobacter nitrofigilis DSM 7299 9172129 YP_003656128.1 CDS Arnit_1967 NC_014166.1 1959685 1960908 D COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR004154:IPR002314:IPR004516:IPR015807:IPR 006195; KEGG: abu:Abu_0965 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: A8ETF1 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase 1959685..1960908 Arcobacter nitrofigilis DSM 7299 9172130 YP_003656129.1 CDS Arnit_1968 NC_014166.1 1960911 1962716 D COGs: COG1166 Arginine decarboxylase (spermidine biosynthesis); InterPro IPR002985:IPR000183; KEGG: abu:Abu_0964 arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: A8ETF0 Arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic; arginine decarboxylase 1960911..1962716 Arcobacter nitrofigilis DSM 7299 9172131 YP_003656130.1 CDS Arnit_1969 NC_014166.1 1962709 1963473 D COGs: COG1045 Serine acetyltransferase; InterPro IPR011004:IPR001451:IPR018357:IPR005881; KEGG: abu:Abu_0963 serine acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM: Serine O-acetyltransferase; SPTR: A8ETE9 Serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase 1962709..1963473 Arcobacter nitrofigilis DSM 7299 9172132 YP_003656131.1 CDS Arnit_1970 NC_014166.1 1963473 1964207 D InterPro IPR002781; KEGG: ccv:CCV52592_1682 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: A7H071 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 1963473..1964207 Arcobacter nitrofigilis DSM 7299 9172133 YP_003656132.1 CDS Arnit_1971 NC_014166.1 1964200 1965438 R COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014001:IPR001650:IPR011545:IPR000629:IPR 014021:IPR014014; KEGG: tdn:Suden_1945 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: C1ZXL0 DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(1964200..1965438) Arcobacter nitrofigilis DSM 7299 9172134 YP_003656133.1 CDS Arnit_1972 NC_014166.1 1965476 1967968 R COGs: COG1048 Aconitase A; InterProIPR001030:IPR015928:IPR000573:IPR015931:IPR 015932; KEGG: ilo:IL1533 aconitate hydratase; PFAM: aconitate hydratase domain protein; SPTR: A3WK89 Aconitate hydratase; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1; aconitate hydratase domain-containing protein complement(1965476..1967968) Arcobacter nitrofigilis DSM 7299 9172135 YP_003656134.1 CDS Arnit_1973 NC_014166.1 1968070 1970070 D COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR010920:IPR011066:IPR011014:IPR006685; KEGG: wsu:WS0996 hypothetical protein; PFAM: MscS Mechanosensitive ion channel; SPTR: Q7MRW3 Putative uncharacterized protein; PFAM: Mechanosensitive ion channel; mechanosensitive ion channel MscS 1968070..1970070 Arcobacter nitrofigilis DSM 7299 9172136 YP_003656135.1 CDS Arnit_1974 NC_014166.1 1970251 1973064 D COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439:IPR017871:IPR004602; KEGG: abu:Abu_0958 excinuclease ABC subunit A; PFAM: ABC transporter related; SPTR: A8ETE4 Excinuclease ABC, subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 1970251..1973064 Arcobacter nitrofigilis DSM 7299 9172137 YP_003656136.1 CDS Arnit_1975 NC_014166.1 1973061 1973366 D KEGG: tdn:Suden_0048 hypothetical protein; SPTR: C1ZY85 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF309); hypothetical protein 1973061..1973366 Arcobacter nitrofigilis DSM 7299 9172138 YP_003656137.1 CDS Arnit_1976 NC_014166.1 1973359 1973715 R KEGG: abu:Abu_0957 hypothetical protein; SPTR: A8ETE3 Putative uncharacterized protein; hypothetical protein complement(1973359..1973715) Arcobacter nitrofigilis DSM 7299 9172139 YP_003656138.1 CDS Arnit_1977 NC_014166.1 1973906 1974967 D COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550; KEGG: cpb:Cphamn1_1595 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; SPTR: B3EK89 Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; hypothetical protein 1973906..1974967 Arcobacter nitrofigilis DSM 7299 9172140 YP_003656139.1 CDS Arnit_1978 NC_014166.1 1974964 1975695 R KEGG: abu:Abu_0910 hypothetical protein; SPTR: A8ET96 Putative uncharacterized protein; hypothetical protein complement(1974964..1975695) Arcobacter nitrofigilis DSM 7299 9172141 YP_003656140.1 CDS Arnit_1979 NC_014166.1 1975830 1976456 D COGs: COG3148 conserved hypothetical protein; InterPro IPR005636; KEGG: ote:Oter_3739 DTW domain-containing protein; PFAM: DTW domain containing protein; SPTR: Q26CH3 Putative uncharacterized protein; PFAM: DTW domain; DTW domain containing protein 1975830..1976456 Arcobacter nitrofigilis DSM 7299 9172142 YP_003656141.1 CDS Arnit_1980 NC_014166.1 1976458 1977612 R KEGG: abu:Abu_0952 hypothetical protein; SPTR: A8ETD8 Putative uncharacterized protein; hypothetical protein complement(1976458..1977612) Arcobacter nitrofigilis DSM 7299 9172143 YP_003656142.1 CDS Arnit_1981 NC_014166.1 1977666 1978904 R InterPro IPR016196:IPR011701; KEGG: abu:Abu_0933 major facilitator superfamily protein, putative oxalate:formate antiporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ETB9 Major facilitator superfamily protein, putative oxalate:formate antiporter; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(1977666..1978904) Arcobacter nitrofigilis DSM 7299 9172144 YP_003656143.1 CDS Arnit_1982 NC_014166.1 1978960 1979181 R KEGG: pin:Ping_1659 hypothetical protein; SPTR: A1SVD7 Putative uncharacterized protein; hypothetical protein complement(1978960..1979181) Arcobacter nitrofigilis DSM 7299 9172145 YP_003656144.1 CDS Arnit_1983 NC_014166.1 1979178 1980095 R COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR019614; KEGG: abu:Abu_0932 hypothetical protein; PFAM: S-adenosylmethionine-dependent methyltransferase; SPTR: A8ETB8 Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase; S-adenosylmethionine-dependentmethyltransferase complement(1979178..1980095) Arcobacter nitrofigilis DSM 7299 9172146 YP_003656145.1 CDS Arnit_1984 NC_014166.1 1980185 1980463 R COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504:IPR012677; KEGG: nis:NIS_0278 RNA-binding protein RNP-1; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: A6Q1N3 RNA-binding protein RNP-1; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); RNP-1 like RNA-binding protein complement(1980185..1980463) Arcobacter nitrofigilis DSM 7299 9172147 YP_003656146.1 CDS Arnit_1985 NC_014166.1 1980662 1981621 R KEGG: rbo:A1I_01290 hypothetical protein; SPTR: Q1RH85 Putative uncharacterized protein; hypothetical protein complement(1980662..1981621) Arcobacter nitrofigilis DSM 7299 9172148 YP_003656147.1 CDS Arnit_1986 NC_014166.1 1981686 1982039 R InterPro IPR011051; KEGG: pin:Ping_2923 hypothetical protein; SPTR: A6FGP6 Putative uncharacterized protein; hypothetical protein complement(1981686..1982039) Arcobacter nitrofigilis DSM 7299 9172149 YP_003656148.1 CDS Arnit_1987 NC_014166.1 1982135 1982983 D COGs: COG1284 conserved hypothetical protein; InterPro IPR003740:IPR019264; KEGG: abu:Abu_1411 hypothetical protein; PFAM: protein of unknown function DUF161; Protein of unknown function DUF2179; SPTR: C1ZYN8 Uncharacterized conserved protein; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein 1982135..1982983 Arcobacter nitrofigilis DSM 7299 9172150 YP_003656149.1 CDS Arnit_1988 NC_014166.1 1983089 1984324 D COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: aha:AHA_2140 proton/glutamate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: A0KK63 Proton/glutamate symporter; PFAM: Sodium:dicarboxylate symporter family; sodium:dicarboxylate symporter 1983089..1984324 Arcobacter nitrofigilis DSM 7299 9172151 YP_003656150.1 CDS Arnit_1989 NC_014166.1 1984336 1985226 R InterPro IPR000620; KEGG: lpf:lpl2401 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C9PGX7 Permease; PFAM: EamA-like transporter family; hypothetical protein complement(1984336..1985226) Arcobacter nitrofigilis DSM 7299 9172152 YP_003656151.1 CDS Arnit_1990 NC_014166.1 1985287 1986246 R COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006139:IPR006140; KEGG: pmj:P9211_12891 lactate dehydrogenase and related dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: A9BBK8 Lactate dehydrogenase and related dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(1985287..1986246) Arcobacter nitrofigilis DSM 7299 9172153 YP_003656152.1 CDS Arnit_1991 NC_014166.1 1986369 1986656 R InterPro IPR011051; KEGG: bpe:BP2299 hypothetical protein; SPTR: C5T0B1 Putative uncharacterized protein; PFAM: Cupin domain; hypothetical protein complement(1986369..1986656) Arcobacter nitrofigilis DSM 7299 9172154 YP_003656153.1 CDS Arnit_1992 NC_014166.1 1986677 1987975 R COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004841:IPR002293:IPR001901; KEGG: paa:Paes_1315 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: B4S8F3 Amino acid permease-associated region; PFAM: Amino acid permease; amino acid permease-associated protein complement(1986677..1987975) Arcobacter nitrofigilis DSM 7299 9172155 YP_003656154.1 CDS Arnit_1993 NC_014166.1 1988077 1988469 D KEGG: mcp:MCAP_0798 ABC transporter, permease protein, putative; SPTR: C7LLI3 ABC transporter, permease protein; ABC transporter permease 1988077..1988469 Arcobacter nitrofigilis DSM 7299 9172156 YP_003656155.1 CDS Arnit_1994 NC_014166.1 1988554 1989921 D COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR000815:IPR016156:IPR004099; KEGG: lbl:LBL_1389 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Q051W6 Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1988554..1989921 Arcobacter nitrofigilis DSM 7299 9172157 YP_003656156.1 CDS Arnit_1995 NC_014166.1 1989941 1990558 R COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: cps:CPS_1844 hypothetical protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: Q484E1 Putative uncharacterized protein; PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427; multiple antibiotic resistance (MarC)-like protein complement(1989941..1990558) Arcobacter nitrofigilis DSM 7299 9172158 YP_003656157.1 CDS Arnit_1996 NC_014166.1 1990703 1990993 R COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: bth:BT_1428 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q8A7U6 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(1990703..1990993) Arcobacter nitrofigilis DSM 7299 9172159 YP_003656158.1 CDS Arnit_1997 NC_014166.1 1991016 1991795 R COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterProIPR018060:IPR009057:IPR003313:IPR000005:IPR 012287; KEGG: cbe:Cbei_3413 AraC protein, arabinose-binding/dimerisation; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A6LYV9 AraC protein, arabinose-binding/dimerisation; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; AraC family transcriptional regulator complement(1991016..1991795) Arcobacter nitrofigilis DSM 7299 9172160 YP_003656159.1 CDS Arnit_1998 NC_014166.1 1991806 1992390 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: cbe:Cbei_3414 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A6LYW0 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; lysine exporter protein complement(1991806..1992390) Arcobacter nitrofigilis DSM 7299 9172161 YP_003656160.1 CDS Arnit_1999 NC_014166.1 1992495 1993079 R COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: dol:Dole_0446 Cro-like protein; PFAM: transglutaminase domain protein; SPTR: Q2BNL1 Lipoprotein, putative; PFAM: Transglutaminase-like superfamily; transglutaminase domain-containing protein complement(1992495..1993079) Arcobacter nitrofigilis DSM 7299 9172162 YP_003656161.1 CDS Arnit_2000 NC_014166.1 1993092 1993334 R InterPro IPR007341; KEGG: cpb:Cphamn1_0910 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: B3EPH7 Transglycosylase-associated protein; PFAM: Transglycosylase associated protein; transglycosylase-associated protein complement(1993092..1993334) Arcobacter nitrofigilis DSM 7299 9172163 YP_003656162.1 CDS Arnit_2001 NC_014166.1 1993488 1993805 R COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR006662:IPR012336:IPR013766:IPR017937:IPR 012335:IPR005746:IPR017936; KEGG: abu:Abu_1880 thioredoxin; PFAM: Thioredoxin domain; SPTR: A8EVZ0 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin complement(1993488..1993805) Arcobacter nitrofigilis DSM 7299 9172164 YP_003656163.1 CDS Arnit_2002 NC_014166.1 1993815 1994411 R COGs: COG0450 Peroxiredoxin; InterProIPR012336:IPR000866:IPR019479:IPR012335:IPR 017936; KEGG: abu:Abu_1879 alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; SPTR: A8ERJ0 Alkyl hydroperoxide reductase/ Thiol specific antioxidant; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(1993815..1994411) Arcobacter nitrofigilis DSM 7299 9172165 YP_003656164.1 CDS Arnit_2003 NC_014166.1 1994526 1995122 R InterPro IPR001646; KEGG: dps:DP2447 McbG protein; PFAM: pentapeptide repeat protein; SPTR: Q6AKE9 Related to McbG protein; PFAM: Pentapeptide repeats (8 copies); pentapeptide repeat-containing protein complement(1994526..1995122) Arcobacter nitrofigilis DSM 7299 9172166 YP_003656165.1 CDS Arnit_2004 NC_014166.1 1995219 1998245 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR009010:IPR006655:IPR006061:IPR006311:IPR 017909; KEGG: wsu:WS0938 TtrA; SPTR: Q7MRY4 TTRA; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TtrA protein complement(1995219..1998245) Arcobacter nitrofigilis DSM 7299 9172167 YP_003656166.1 CDS Arnit_2005 NC_014166.1 1998235 1999419 R COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: wsu:WS0937 hypothetical protein; PFAM: Polysulphide reductase NrfD; SPTR: Q7MRY5 Putative uncharacterized protein nuoM; PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD complement(1998235..1999419) Arcobacter nitrofigilis DSM 7299 9172168 YP_003656167.1 CDS Arnit_2006 NC_014166.1 1999412 2000218 R COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterProIPR001450:IPR017900:IPR006311:IPR017909:IPR 017896; KEGG: wsu:WS0936 hypothetical protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A1HNC7 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(1999412..2000218) Arcobacter nitrofigilis DSM 7299 9172169 YP_003656168.1 CDS Arnit_2007 NC_014166.1 2000299 2002029 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR005467; KEGG: wsu:WS0935 putative two-component sensor; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q7M9G7 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(2000299..2002029) Arcobacter nitrofigilis DSM 7299 9172170 YP_003656169.1 CDS Arnit_2008 NC_014166.1 2002019 2002708 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR011006:IPR016032:IPR001867:IPR 011991; KEGG: cco:CCC13826_1869 NAD(P)H-flavin oxidoreductase; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C6RJ62 Response regulator receiver domain protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(2002019..2002708) Arcobacter nitrofigilis DSM 7299 9172171 YP_003656170.1 CDS Arnit_2009 NC_014166.1 2003006 2003224 D COGs: COG1278 Cold shock protein; InterProIPR002059:IPR011129:IPR016027:IPR012156:IPR 019844:IPR012340; KEGG: tdn:Suden_1504 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B6BNR1 'Cold-shock' DNA-binding domain, putative; PFAM: 'Cold-shock' DNA-binding domain; cold-shock DNA-binding domain-containing protein 2003006..2003224 Arcobacter nitrofigilis DSM 7299 9172172 YP_003656171.1 CDS Arnit_2010 NC_014166.1 2003310 2004395 R COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR002052; KEGG: mxa:MXAN_4925 methyltransferase; SPTR: Q1VRC2 Putative uncharacterized protein; PFAM: Methyltransferase small domain; polypeptide chain release factor methylase complement(2003310..2004395) Arcobacter nitrofigilis DSM 7299 9172173 YP_003656172.1 CDS Arnit_2011 NC_014166.1 2004552 2005247 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR016040:IPR002198; KEGG: Pc21g08110; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: B6HLK5 Pc21g08110 protein; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2004552..2005247) Arcobacter nitrofigilis DSM 7299 9172174 YP_003656173.1 CDS Arnit_2012 NC_014166.1 2005411 2005914 D KEGG: dps:DP0703 hypothetical protein; SPTR: Q6AQE1 Putative uncharacterized protein; hypothetical protein 2005411..2005914 Arcobacter nitrofigilis DSM 7299 9172175 YP_003656174.1 CDS Arnit_2013 NC_014166.1 2005981 2006130 R KEGG: lch:Lcho_2520 hypothetical protein; SPTR: A0YEF7 Putative uncharacterized protein; hypothetical protein complement(2005981..2006130) Arcobacter nitrofigilis DSM 7299 9172176 YP_003656175.1 CDS Arnit_2014 NC_014166.1 2006347 2006949 D COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: rfr:Rfer_2293 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C6P5Y9 Metal dependent phosphohydrolase; PFAM: HD domain; metal dependent phosphohydrolase 2006347..2006949 Arcobacter nitrofigilis DSM 7299 9172177 YP_003656176.1 CDS Arnit_2015 NC_014166.1 2006946 2007413 R COGs: COG4087 Soluble P-type ATPase; KEGG: chy:CHY_2668 hypothetical protein; SPTR: A3YFU2 Putative uncharacterized protein; hypothetical protein complement(2006946..2007413) Arcobacter nitrofigilis DSM 7299 9172178 YP_003656177.1 CDS Arnit_2016 NC_014166.1 2007410 2008297 R InterPro IPR000620; KEGG: sun:SUN_1921 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A6QBK9 Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein complement(2007410..2008297) Arcobacter nitrofigilis DSM 7299 9172179 YP_003656178.1 CDS Arnit_2017 NC_014166.1 2008287 2009051 R InterPro IPR011009:IPR002573; KEGG: sun:SUN_0535 hypothetical protein; PFAM: Choline/ethanolamine kinase; SPTR: C2A304 Phosphotransferase family protein; PFAM: Choline/ethanolamine kinase; choline/ethanolamine kinase complement(2008287..2009051) Arcobacter nitrofigilis DSM 7299 9172180 YP_003656179.1 CDS Arnit_2018 NC_014166.1 2009023 2009619 R COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: pha:PSHAa2431 transporter protein; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: C2A305 Nicotinamide mononucleotide transporter PnuC; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC complement(2009023..2009619) Arcobacter nitrofigilis DSM 7299 9172181 YP_003656180.1 CDS Arnit_2019 NC_014166.1 2009830 2010654 D KEGG: dar:Daro_4085 ABC-type phosphate/phosphonate transport system periplasmic component-like protein; SPTR: Q478C0 ABC-type phosphate/phosphonate transport system periplasmic component-like protein; phosphate/phosphonate ABC transporter periplasmic protein PhnD family protein 2009830..2010654 Arcobacter nitrofigilis DSM 7299 9172182 YP_003656181.1 CDS Arnit_2020 NC_014166.1 2010651 2012147 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003660:IPR003594:IPR009082:IPR 005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SPTR: A8EVB1 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 2010651..2012147 Arcobacter nitrofigilis DSM 7299 9172183 YP_003656182.1 CDS Arnit_2021 NC_014166.1 2012159 2013532 R COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524:IPR015424:IPR011991:IPR015421; KEGG: sun:SUN_0922 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: A6Q8S1 Transcriptional regulator, GntR family; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; GntR family transcriptional regulator complement(2012159..2013532) Arcobacter nitrofigilis DSM 7299 9172184 YP_003656183.1 CDS Arnit_2022 NC_014166.1 2013641 2014063 D InterPro IPR001763; KEGG: cyc:PCC7424_1705 rhodanese domain protein; SPTR: C2RIT8 Putative uncharacterized protein; hypothetical protein 2013641..2014063 Arcobacter nitrofigilis DSM 7299 9172185 YP_003656184.1 CDS Arnit_2023 NC_014166.1 2014143 2014427 R KEGG: vex:VEA_001240 hypothetical protein; SPTR: A3WN52 YrhK; hypothetical protein complement(2014143..2014427) Arcobacter nitrofigilis DSM 7299 9172186 YP_003656185.1 CDS Arnit_2024 NC_014166.1 2014501 2015064 R COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR020103:IPR006145:IPR018496:IPR000748; KEGG: sun:SUN_0745 ribosomal small subunit pseudouridine synthase A; PFAM: pseudouridine synthase; SPTR: A6Q895 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase family; pseudouridine synthase complement(2014501..2015064) Arcobacter nitrofigilis DSM 7299 9172187 YP_003656186.1 CDS Arnit_2025 NC_014166.1 2015205 2015774 R KEGG: cps:CPS_2457 hypothetical protein; SPTR: Q1ZC20 Putative uncharacterized protein; hypothetical protein complement(2015205..2015774) Arcobacter nitrofigilis DSM 7299 9172188 YP_003656187.1 CDS Arnit_2026 NC_014166.1 2015790 2016284 R KEGG: sbp:Sbal223_3071 hypothetical protein; SPTR: Q2BGI9 Probable transmembrane protein; hypothetical protein complement(2015790..2016284) Arcobacter nitrofigilis DSM 7299 9172189 YP_003656188.1 CDS Arnit_2027 NC_014166.1 2016295 2017095 R COGs: COG0730 permease; InterPro IPR002781; KEGG: vex:VEA_001494 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Q1V998 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein complement(2016295..2017095) Arcobacter nitrofigilis DSM 7299 9172190 YP_003656189.1 CDS Arnit_2028 NC_014166.1 2017221 2018219 R KEGG: sun:SUN_0434 hypothetical protein; SPTR: B6BKS8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1566); hypothetical protein complement(2017221..2018219) Arcobacter nitrofigilis DSM 7299 9172191 YP_003656190.1 CDS Arnit_2029 NC_014166.1 2018402 2020927 D COGs: COG5309 Exo-beta-1 3-glucanase; InterPro IPR017853:IPR001173:IPR000490; KEGG: abu:Abu_1451 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: A8EUT2 Glycosyltransferase; PFAM: Glycosyl transferase family 2; Glycosyl hydrolases family 17; family 2 glycosyl transferase 2018402..2020927 Arcobacter nitrofigilis DSM 7299 9172192 YP_003656191.1 CDS Arnit_2030 NC_014166.1 2020972 2021817 R InterPro IPR000620; KEGG: dat:HRM2_46400 putative integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C0QGB7 Putative integral membrane protein; PFAM: EamA-like transporter family; hypothetical protein complement(2020972..2021817) Arcobacter nitrofigilis DSM 7299 9172193 YP_003656192.1 CDS Arnit_2031 NC_014166.1 2021892 2022239 R KEGG: abu:Abu_0914 hypothetical protein; SPTR: A8ETA0 Putative uncharacterized protein; hypothetical protein complement(2021892..2022239) Arcobacter nitrofigilis DSM 7299 9172194 YP_003656193.1 CDS Arnit_2032 NC_014166.1 2022242 2022589 R COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: vcj:VCD_000144 phage shock protein E; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C5V258 Rhodanese domain protein; PFAM: Rhodanese-like domain; rhodanese domain-containing protein complement(2022242..2022589) Arcobacter nitrofigilis DSM 7299 9172195 YP_003656194.1 CDS Arnit_2033 NC_014166.1 2022662 2023291 R COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR016181:IPR000182; KEGG: cbe:Cbei_1565 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: A6LTQ9 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(2022662..2023291) Arcobacter nitrofigilis DSM 7299 9172196 YP_003656195.1 CDS Arnit_2034 NC_014166.1 2023288 2023659 R InterPro IPR003718; KEGG: pjd:Pjdr2_4935 OsmC family protein; PFAM: OsmC family protein; SPTR: C6D0E7 OsmC family protein; PFAM: OsmC-like protein; OsmC family protein complement(2023288..2023659) Arcobacter nitrofigilis DSM 7299 9172197 YP_003656196.1 CDS Arnit_2035 NC_014166.1 2023696 2024508 R COGs: COG3782 conserved hypothetical protein; InterPro IPR015003; KEGG: gfo:GFO_1751 hypothetical protein; PFAM: Domain of unknown function DUF1853; SPTR: A0M276 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1853); hypothetical protein complement(2023696..2024508) Arcobacter nitrofigilis DSM 7299 9172198 YP_003656197.1 CDS Arnit_2036 NC_014166.1 2024766 2024930 D hypothetical protein 2024766..2024930 Arcobacter nitrofigilis DSM 7299 9172199 YP_003656198.1 CDS Arnit_2037 NC_014166.1 2024947 2025315 D KEGG: cac:CAC3393 hypothetical protein; SPTR: C9KLQ7 Putative uncharacterized protein; hypothetical protein 2024947..2025315 Arcobacter nitrofigilis DSM 7299 9172200 YP_003656199.1 CDS Arnit_2038 NC_014166.1 2025436 2026125 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: aoe:Clos_1202 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C7IBJ3 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 2025436..2026125 Arcobacter nitrofigilis DSM 7299 9172201 YP_003656200.1 CDS Arnit_2039 NC_014166.1 2026122 2027228 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003660:IPR003661:IPR003594:IPR 009082:IPR005467; KEGG: sak:SAK_0175 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C7IBJ2 Histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 2026122..2027228 Arcobacter nitrofigilis DSM 7299 9172202 YP_003656201.1 CDS Arnit_2040 NC_014166.1 2027372 2029636 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer complement(2027372..2029636) Arcobacter nitrofigilis DSM 7299 9172203 YP_003656202.1 CDS Arnit_2041 NC_014166.1 2030037 2030783 R COGs: COG3884 Acyl-ACP thioesterase; InterPro IPR002864; KEGG: mta:Moth_2204 acyl-ACP thioesterase; PFAM: acyl-ACP thioesterase; SPTR: Q2RGE6 Acyl-ACP thioesterase; PFAM: Acyl-ACP thioesterase; acyl-ACP thioesterase complement(2030037..2030783) Arcobacter nitrofigilis DSM 7299 9172204 YP_003656203.1 CDS Arnit_2042 NC_014166.1 2030945 2031949 R KEGG: mmw:Mmwyl1_2936 hypothetical protein; SPTR: A6VZG8 Putative uncharacterized protein; hypothetical protein complement(2030945..2031949) Arcobacter nitrofigilis DSM 7299 9172205 YP_003656204.1 CDS Arnit_2043 NC_014166.1 2032137 2032550 R KEGG: gdi:GDI_2752 hypothetical protein; SPTR: A9HQ89 Putative uncharacterized protein; hypothetical protein complement(2032137..2032550) Arcobacter nitrofigilis DSM 7299 9172206 YP_003656205.1 CDS Arnit_2044 NC_014166.1 2032636 2033433 R KEGG: shn:Shewana3_2240 hypothetical protein; SPTR: A0KXF0 Putative uncharacterized protein; hypothetical protein complement(2032636..2033433) Arcobacter nitrofigilis DSM 7299 9172207 YP_003656206.1 CDS Arnit_2045 NC_014166.1 2033528 2034073 R KEGG: bhy:BHWA1_02546 hypothetical protein; SPTR: C5F172 Putative uncharacterized protein; hypothetical protein complement(2033528..2034073) Arcobacter nitrofigilis DSM 7299 9172208 YP_003656207.1 CDS Arnit_2046 NC_014166.1 2034219 2034626 R InterPro IPR016181:IPR000182; KEGG: cyc:PCC7424_5258 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B4B725 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(2034219..2034626) Arcobacter nitrofigilis DSM 7299 9172209 YP_003656208.1 CDS Arnit_2047 NC_014166.1 2034710 2035801 R KEGG: mmo:MMOB0380 unspecified sugar ABC transport permease protein; SPTR: Q6KIQ2 Unspecified sugar ABC transport permease protein; hypothetical protein complement(2034710..2035801) Arcobacter nitrofigilis DSM 7299 9172210 YP_003656209.1 CDS Arnit_2048 NC_014166.1 2035860 2036384 R KEGG: fjo:Fjoh_3694 hypothetical protein; SPTR: A5FDL3 Putative uncharacterized protein; hypothetical protein complement(2035860..2036384) Arcobacter nitrofigilis DSM 7299 9172211 YP_003656210.1 CDS Arnit_2049 NC_014166.1 2036468 2037055 R InterPro IPR013026; KEGG: bhy:BHWA1_01820 TPR domain-containing protein; SPTR: C0R2E5 TPR domain-containing protein; hypothetical protein complement(2036468..2037055) Arcobacter nitrofigilis DSM 7299 9172212 YP_003656211.1 CDS Arnit_2050 NC_014166.1 2037145 2037597 R COGs: COG2128 conserved hypothetical protein; KEGG: bcb:BCB4264_A1415 hypothetical protein; SPTR: C2SHA7 Putative uncharacterized protein; hypothetical protein complement(2037145..2037597) Arcobacter nitrofigilis DSM 7299 9172213 YP_003656212.1 CDS Arnit_2051 NC_014166.1 2037701 2038021 R KEGG: hypothetical protein; SPTR: A8IXD3 Predicted protein; hypothetical protein complement(2037701..2038021) Arcobacter nitrofigilis DSM 7299 9172214 YP_003656213.1 CDS Arnit_2052 NC_014166.1 2038099 2039031 R InterPro IPR019504; KEGG: fjo:Fjoh_3032 phage exclusion protein Lit; PFAM: Peptidase U49, Lit peptidase; SPTR: A6GL96 Putative uncharacterized protein; PFAM: Peptidase U49; peptidase U49 complement(2038099..2039031) Arcobacter nitrofigilis DSM 7299 9172215 YP_003656214.1 CDS Arnit_2053 NC_014166.1 2039110 2039523 R KEGG: gdi:GDI_2752 hypothetical protein; SPTR: A9HQ89 Putative uncharacterized protein; hypothetical protein complement(2039110..2039523) Arcobacter nitrofigilis DSM 7299 9172216 YP_003656215.1 CDS Arnit_2054 NC_014166.1 2039668 2040075 R InterPro IPR016181:IPR000182; KEGG: cyc:PCC7424_5258 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B4B725 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(2039668..2040075) Arcobacter nitrofigilis DSM 7299 9172217 YP_003656216.1 CDS Arnit_2055 NC_014166.1 2040217 2040771 R KEGG: hypothetical protein; SPTR: A7BAB2 Putative uncharacterized protein; hypothetical protein complement(2040217..2040771) Arcobacter nitrofigilis DSM 7299 9172218 YP_003656217.1 CDS Arnit_2056 NC_014166.1 2040884 2041675 R KEGG: hch:HCH_00928 hypothetical protein; SPTR: Q2SNF6 Putative uncharacterized protein; hypothetical protein complement(2040884..2041675) Arcobacter nitrofigilis DSM 7299 9172219 YP_003656218.1 CDS Arnit_2057 NC_014166.1 2041755 2042558 R InterPro IPR012654; KEGG: shn:Shewana3_1247 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A0KUL3 Putative uncharacterized protein; PFAM: Protein of unknown function (Hypoth_ymh); TIGRFAM: conserved hypothetical protein TIGR02391; hypothetical protein complement(2041755..2042558) Arcobacter nitrofigilis DSM 7299 9172220 YP_003656219.1 CDS Arnit_2058 NC_014166.1 2042643 2042936 R COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: swd:Swoo_0549 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: A9HPV2 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(2042643..2042936) Arcobacter nitrofigilis DSM 7299 9172221 YP_003656220.1 CDS Arnit_2059 NC_014166.1 2043549 2044067 R KEGG: hypothetical protein; SPTR: Q5CVY9 Uncharacterized coiled coil protein; hypothetical protein complement(2043549..2044067) Arcobacter nitrofigilis DSM 7299 9172222 YP_003656221.1 CDS Arnit_2060 NC_014166.1 2044239 2045774 R COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR011702:IPR001317:IPR006220:IPR000991:IPR 018318:IPR001674:IPR014729:IPR004739:IPR017926; KEGG: abu:Abu_0921 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like; SPTR: A8ETA7 GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase large subunit complement(2044239..2045774) Arcobacter nitrofigilis DSM 7299 9172223 YP_003656222.1 CDS Arnit_2061 NC_014166.1 2045866 2046060 R KEGG: abu:Abu_0817 hypothetical protein; SPTR: A8ET08 Putative uncharacterized protein; hypothetical protein complement(2045866..2046060) Arcobacter nitrofigilis DSM 7299 9172224 YP_003656223.1 CDS Arnit_2062 NC_014166.1 2046142 2047533 R COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: tdn:Suden_0421 transporter, putative; PFAM: Citrate transporter; SPTR: Q30TH9 Transporter, putative; PFAM: Citrate transporter; citrate transporter complement(2046142..2047533) Arcobacter nitrofigilis DSM 7299 9172225 YP_003656224.1 CDS Arnit_2063 NC_014166.1 2047533 2048984 R COGs: COG0029 Aspartate oxidase; InterPro IPR015939:IPR003953:IPR005288; KEGG: abu:Abu_0922 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A8ETA8 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase complement(2047533..2048984) Arcobacter nitrofigilis DSM 7299 9172226 YP_003656225.1 CDS Arnit_2064 NC_014166.1 2049080 2049496 D KEGG: abu:Abu_0923 hypothetical protein; SPTR: A8ETA9 Putative uncharacterized protein; hypothetical protein 2049080..2049496 Arcobacter nitrofigilis DSM 7299 9172227 YP_003656226.1 CDS Arnit_2065 NC_014166.1 2049483 2050070 R COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: abu:Abu_0924 hypothetical protein; PFAM: protein of unknown function DUF45; SPTR: A8ETB0 Putative uncharacterized protein; PFAM: Protein of unknown function DUF45; hypothetical protein complement(2049483..2050070) Arcobacter nitrofigilis DSM 7299 9172228 YP_003656227.1 CDS Arnit_2066 NC_014166.1 2050150 2051322 D COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176:IPR015424:IPR004839:IPR015421; KEGG: abu:Abu_0925 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A8ETB1 Aspartate aminotransferase, aminotransferase, classes I and II; PFAM: Aminotransferase class I and II; class I and II aminotransferase 2050150..2051322 Arcobacter nitrofigilis DSM 7299 9172229 YP_003656228.1 CDS Arnit_2067 NC_014166.1 2051327 2052211 D COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: abu:Abu_0926 cation efflux protein; PFAM: cation efflux protein; SPTR: A8ETB2 Cation efflux protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2051327..2052211 Arcobacter nitrofigilis DSM 7299 9172230 YP_003656229.1 CDS Arnit_2068 NC_014166.1 2052201 2054375 D COGs: COG4252 transmembrane sensor domain; InterPro IPR001054:IPR007890; KEGG: abu:Abu_0928 adenylate/guanylate cyclase; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: A8ETB4 Adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain; Chase sensor domain-containing adenylate/guanylate cyclase 2052201..2054375 Arcobacter nitrofigilis DSM 7299 9172231 YP_003656230.1 CDS Arnit_2069 NC_014166.1 2054425 2054577 D KEGG: hypothetical protein ; K10658 E3 ubiquitin-protein ligase MARCH3; SPTR: C3ZXL6 Putative uncharacterized protein (Fragment); hypothetical protein 2054425..2054577 Arcobacter nitrofigilis DSM 7299 9172232 YP_003656231.1 CDS Arnit_2070 NC_014166.1 2054584 2055207 R COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: abu:Abu_0614 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: A8ESF5 Putative uncharacterized protein; PFAM: CBS domain; hypothetical protein complement(2054584..2055207) Arcobacter nitrofigilis DSM 7299 9172233 YP_003656232.1 CDS Arnit_2071 NC_014166.1 2055984 2057942 D COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439:IPR017871; KEGG: abu:Abu_0909 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ET95 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 2055984..2057942 Arcobacter nitrofigilis DSM 7299 9172234 YP_003656233.1 CDS Arnit_2072 NC_014166.1 2057988 2058431 D COGs: COG1610 conserved hypothetical protein; InterPro IPR003789:IPR019004; KEGG: abu:Abu_0908 GatB/YqeY family protein; PFAM: Protein of unknown function; SPTR: A8ET94 GatB/YqeY family protein; PFAM: Yqey-like protein; hypothetical protein 2057988..2058431 Arcobacter nitrofigilis DSM 7299 9172235 YP_003656234.1 CDS Arnit_2073 NC_014166.1 2058444 2059700 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_0907 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8ET93 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2058444..2059700 Arcobacter nitrofigilis DSM 7299 9172236 YP_003656235.1 CDS Arnit_2074 NC_014166.1 2059753 2061420 R COGs: COG2831 Hemolysin activation/secretion protein; InterPro IPR013686; KEGG: tdn:Suden_1007 hemolysin activation/secretion protein-like; PFAM: Polypeptide-transport-associated domain protein ShlB-type; SPTR: Q30RU6 Hemolysin activation/secretion protein-like protein; PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; polypeptide-transport-associated domain-containing protein complement(2059753..2061420) Arcobacter nitrofigilis DSM 7299 9172237 YP_003656236.1 CDS Arnit_2075 NC_014166.1 2061452 2064637 R InterPro IPR011050:IPR008638:IPR011493; KEGG: tdn:Suden_1008 GLUG; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; SPTR: Q30RU5 GLUG; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: The GLUG motif; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain; filamentous hemagglutinin family outer membrane protein complement(2061452..2064637) Arcobacter nitrofigilis DSM 7299 9172238 YP_003656237.1 CDS Arnit_2076 NC_014166.1 2064697 2066148 R InterProIPR019734:IPR013105:IPR001440:IPR011990:IPR 017481:IPR013026; KEGG: ter:Tery_3075 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Q4C9M1 TPR repeat:TPR repeat; PFAM: Tetratricopeptide repeat; TIGRFAM: conserved hypothetical protein TIGR03032; hypothetical protein complement(2064697..2066148) Arcobacter nitrofigilis DSM 7299 9172239 YP_003656238.1 CDS Arnit_2077 NC_014166.1 2066145 2066807 R COGs: COG0529 Adenylylsulfate kinase and related kinase; InterPro IPR002891; KEGG: gwc:GWCH70_0411 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; PRIAM: Adenylyl-sulfate kinase; SPTR: B6BKH4 Adenylyl-sulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); adenylylsulfate kinase complement(2066145..2066807) Arcobacter nitrofigilis DSM 7299 9172240 YP_003656239.1 CDS Arnit_2078 NC_014166.1 2066797 2067624 R KEGG: nam:NAMH_1565 putative lipoprotein; SPTR: B9L6G6 Putative lipoprotein; putative lipoprotein complement(2066797..2067624) Arcobacter nitrofigilis DSM 7299 9172241 YP_003656240.1 CDS Arnit_2079 NC_014166.1 2067649 2070036 R COGs: COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; InterPro IPR005546:IPR006315; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; SPTR: B9L6G7 Putative outer membrane autotransporter barrel domain protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain; outer membrane autotransporter barrel domain-containing protein complement(2067649..2070036) Arcobacter nitrofigilis DSM 7299 9172242 YP_003656241.1 CDS Arnit_2080 NC_014166.1 2070137 2073214 R InterPro IPR011050:IPR008638:IPR011493; KEGG: tdn:Suden_1008 GLUG; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; SPTR: Q30RU5 GLUG; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: The GLUG motif; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain; filamentous hemagglutinin family outer membrane protein complement(2070137..2073214) Arcobacter nitrofigilis DSM 7299 9172243 YP_003656242.1 CDS Arnit_2081 NC_014166.1 2073276 2074712 R COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR011623:IPR011495; KEGG: abu:Abu_1163 two-component sensor histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; SPTR: A8ETZ9 Two-component sensor histidine kinase; PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase complement(2073276..2074712) Arcobacter nitrofigilis DSM 7299 9172244 YP_003656243.1 CDS Arnit_2082 NC_014166.1 2074795 2075157 R KEGG: abu:Abu_1163 two-component sensor histidine kinase; SPTR: A8ETZ9 Two-component sensor histidine kinase; PFAM: 7TMR-DISM extracellular 2; two-component sensor histidine kinase complement(2074795..2075157) Arcobacter nitrofigilis DSM 7299 9172245 YP_003656244.1 CDS Arnit_2083 NC_014166.1 2075248 2075934 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: nis:NIS_0512 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A6Q2B7 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 2075248..2075934 Arcobacter nitrofigilis DSM 7299 9172246 YP_003656245.1 CDS Arnit_2084 NC_014166.1 2075965 2076762 R InterPro IPR014127; KEGG: abu:Abu_0900 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8ET86 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2400); TIGRFAM: conserved hypothetical protein TIGR02757; hypothetical protein complement(2075965..2076762) Arcobacter nitrofigilis DSM 7299 9172247 YP_003656246.1 CDS Arnit_2085 NC_014166.1 2076822 2077643 D COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002347:IPR002198:IPR016040; KEGG: abu:Abu_0899 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8ET85 Oxidoreductase, short-chain dehydrogenase/reductase family; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2076822..2077643 Arcobacter nitrofigilis DSM 7299 9172248 YP_003656247.1 CDS Arnit_2086 NC_014166.1 2077667 2079382 R COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: ctc:CTC00567 Na+/H+ antiporter; PFAM: Na+/H+ antiporter NhaC-like; SPTR: B9D5E6 Na+/H+ antiporter family; PFAM: Na+/H+ antiporter family; Na+/H+ antiporter NhaC complement(2077667..2079382) Arcobacter nitrofigilis DSM 7299 9172249 YP_003656248.1 CDS Arnit_2087 NC_014166.1 2079423 2079977 R COGs: COG1971 membrane protein; InterPro IPR003810; KEGG: abu:Abu_0335 hypothetical protein; PFAM: protein of unknown function DUF204; SPTR: B6BHJ1 Membrane protein; PFAM: Domain of unknown function DUF; hypothetical protein complement(2079423..2079977) Arcobacter nitrofigilis DSM 7299 9172250 YP_003656249.1 CDS Arnit_2088 NC_014166.1 2079978 2080778 R COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: abu:Abu_0894 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8ET80 ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(2079978..2080778) Arcobacter nitrofigilis DSM 7299 9172251 YP_003656250.1 CDS Arnit_2089 NC_014166.1 2080780 2081370 R COGs: COG0742 N6-adenine-specific methylase; InterPro IPR016065:IPR004398:IPR002052; KEGG: abu:Abu_0893 putative methyltransferase; PFAM: Protein of unknown function methylase putative; SPTR: A8ET79 Putative methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; methyltransferase complement(2080780..2081370) Arcobacter nitrofigilis DSM 7299 9172252 YP_003656251.1 CDS Arnit_2090 NC_014166.1 2081581 2082435 D KEGG: hypothetical protein; SPTR: Q8IIG7 Uncharacterized protein PF11_0207; hypothetical protein 2081581..2082435 Arcobacter nitrofigilis DSM 7299 9172253 YP_003656252.1 CDS Arnit_2091 NC_014166.1 2082487 2083299 D COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR020471:IPR001395; KEGG: mca:MCA0485 aldo/keto reductase family oxidoreductase; PFAM: aldo/keto reductase; SPTR: Q60BI7 Oxidoreductase, aldo/keto reductase family; PFAM: Aldo/keto reductase family; aldo/keto reductase 2082487..2083299 Arcobacter nitrofigilis DSM 7299 9172254 YP_003656253.1 CDS Arnit_2092 NC_014166.1 2083306 2084853 R COGs: COG1418 HD superfamily hydrolase; InterProIPR004087:IPR003607:IPR018111:IPR006674:IPR 017705:IPR006675:IPR004088; KEGG: abu:Abu_0892 phosphodiesterase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; PRIAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: A8ET78 2',3'-cyclic-nucleotide 2'-phosphodiesterase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; metal dependent phosphohydrolase complement(2083306..2084853) Arcobacter nitrofigilis DSM 7299 9172255 YP_003656254.1 CDS Arnit_2093 NC_014166.1 2084872 2085408 R COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: abu:Abu_0891 putative 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: A8ET77 Putative 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase complement(2084872..2085408) Arcobacter nitrofigilis DSM 7299 9172256 YP_003656255.1 CDS Arnit_2094 NC_014166.1 2085468 2086010 D InterProIPR012336:IPR013740:IPR017937:IPR012335:IPR 017936; KEGG: abu:Abu_0890 putative lipoprotein thiredoxin; PFAM: Redoxin domain protein; SPTR: A8ET76 Putative lipoprotein thiredoxin; PFAM: Redoxin; redoxin domain-containing protein 2085468..2086010 Arcobacter nitrofigilis DSM 7299 9172257 YP_003656256.1 CDS Arnit_2095 NC_014166.1 2086011 2086943 D COGs: COG0552 Signal recognition particle GTPase; InterPro IPR003593:IPR000897:IPR004390; KEGG: abu:Abu_0889 signal recognition particle-docking GTPase FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; SPTR: A8ET75 Signal recognition particle-docking GTPase FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY 2086011..2086943 Arcobacter nitrofigilis DSM 7299 9172258 YP_003656257.1 CDS Arnit_2096 NC_014166.1 2086965 2087849 D KEGG: wsu:WS0010 hypothetical protein; SPTR: Q7MSX8 Putative uncharacterized protein; hypothetical protein 2086965..2087849 Arcobacter nitrofigilis DSM 7299 9172259 YP_003656258.1 CDS Arnit_2097 NC_014166.1 2087846 2088508 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_0904 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ET90 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 2087846..2088508 Arcobacter nitrofigilis DSM 7299 9172260 YP_003656259.1 CDS Arnit_2098 NC_014166.1 2088495 2089646 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003661:IPR003594:IPR009082:IPR 005467; KEGG: abu:Abu_0905 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ET91 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 2088495..2089646 Arcobacter nitrofigilis DSM 7299 9172261 YP_003656260.1 CDS Arnit_2099 NC_014166.1 2089717 2090640 D COGs: COG3258 Cytochrome c; InterPro IPR009056:IPR003088; KEGG: tcx:Tcr_2105 cytochrome c, class I; PFAM: cytochrome c class I; SPTR: Q31DS9 Cytochrome c, class I; PFAM: Cytochrome c; cytochrome c class I 2089717..2090640 Arcobacter nitrofigilis DSM 7299 9172262 YP_003656261.1 CDS Arnit_2100 NC_014166.1 2090828 2091169 D InterPro IPR005149:IPR011991; KEGG: bsu:BSU11079 putative DNA/RNA binding protein; PFAM: transcriptional regulator PadR family protein; SPTR: C0H3Y4 Putative DNA-binding protein yizB; PFAM: Transcriptional regulator PadR-like family; PadR-like family transcriptional regulator 2090828..2091169 Arcobacter nitrofigilis DSM 7299 9172263 YP_003656262.1 CDS Arnit_2101 NC_014166.1 2091169 2091933 D KEGG: CCAAT-box DNA binding protein subunit B; SPTR: A8RCJ4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1700); hypothetical protein 2091169..2091933 Arcobacter nitrofigilis DSM 7299 9172264 YP_003656263.1 CDS Arnit_2102 NC_014166.1 2091989 2092618 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: bxe:Bxe_B2075 amino acid efflux pump, RhtB family protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q13PS7 Amino acid efflux pump, RhtB family, LysE superfamily; PFAM: LysE type translocator; lysine exporter protein complement(2091989..2092618) Arcobacter nitrofigilis DSM 7299 9172265 YP_003656264.1 CDS Arnit_2103 NC_014166.1 2092630 2093094 R InterPro IPR012337:IPR002156; KEGG: abu:Abu_1463 ribonuclease H-like protein; PFAM: ribonuclease H; SPTR: A8EUU4 Ribonuclease H-like protein; PFAM: RNase H; ribonuclease H complement(2092630..2093094) Arcobacter nitrofigilis DSM 7299 9172266 YP_003656265.1 CDS Arnit_2104 NC_014166.1 2093091 2093642 R COGs: COG3150 esterase; InterPro IPR008886; KEGG: abu:Abu_0885 hypothetical protein; PFAM: protein of unknown function UPF0227; SPTR: A8ET71 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0227); hypothetical protein complement(2093091..2093642) Arcobacter nitrofigilis DSM 7299 9172267 YP_003656266.1 CDS Arnit_2105 NC_014166.1 2093758 2095671 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013163; KEGG: abu:Abu_0324 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ERM5 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer complement(2093758..2095671) Arcobacter nitrofigilis DSM 7299 9172268 YP_003656267.1 CDS Arnit_2106 NC_014166.1 2095837 2096703 D COGs: COG2017 Galactose mutarotase; InterPro IPR011013:IPR008183:IPR014718; KEGG: abu:Abu_1477 aldose 1-epimerase family protein, LacX; PFAM: Aldose 1-epimerase; SPTR: A8EUV8 Aldose 1-epimerase family protein, LacX; PFAM: Aldose 1-epimerase; aldose 1-epimerase 2095837..2096703 Arcobacter nitrofigilis DSM 7299 9172269 YP_003656268.1 CDS Arnit_2107 NC_014166.1 2096705 2097142 R COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR016193:IPR002125; KEGG: wsu:WS1357 cytosine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; PRIAM: Cytosine deaminase; SPTR: B6BMF3 Cytosine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cytosine deaminase complement(2096705..2097142) Arcobacter nitrofigilis DSM 7299 9172270 YP_003656269.1 CDS Arnit_2108 NC_014166.1 2097154 2098074 R KEGG: rba:RB12630 signal peptide; SPTR: A6CAJ1 Putative uncharacterized protein; signal peptide complement(2097154..2098074) Arcobacter nitrofigilis DSM 7299 9172271 YP_003656270.1 CDS Arnit_2109 NC_014166.1 2098087 2098788 R InterPro IPR008985:IPR013320; KEGG: sde:Sde_3272 hypothetical protein; SPTR: P84143 Alginate lyase; PFAM: Alginate lyase; hypothetical protein complement(2098087..2098788) Arcobacter nitrofigilis DSM 7299 9172272 YP_003656271.1 CDS Arnit_2110 NC_014166.1 2098904 2099497 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: hch:HCH_06500 putative threonine efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q1JZ10 Putative threonine efflux protein; PFAM: LysE type translocator; lysine exporter protein complement(2098904..2099497) Arcobacter nitrofigilis DSM 7299 9172273 YP_003656272.1 CDS Arnit_2111 NC_014166.1 2099535 2099984 R InterPro IPR018637; KEGG: shl:Shal_2854 hypothetical protein; PFAM: Protein of unknown function DUF2059; SPTR: B0TMP5 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2059); hypothetical protein complement(2099535..2099984) Arcobacter nitrofigilis DSM 7299 9172274 YP_003656273.1 CDS Arnit_2112 NC_014166.1 2100174 2100797 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: ttu:TERTU_3762 translocator protein, LysE family; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A6EVE4 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; lysine exporter protein complement(2100174..2100797) Arcobacter nitrofigilis DSM 7299 9172275 YP_003656274.1 CDS Arnit_2113 NC_014166.1 2101423 2101734 R KEGG: cph:Cpha266_1616 hypothetical protein; SPTR: A1BGW0 Putative uncharacterized protein; hypothetical protein complement(2101423..2101734) Arcobacter nitrofigilis DSM 7299 9172276 YP_003656275.1 CDS Arnit_2114 NC_014166.1 2101885 2103234 D COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593:IPR020568; KEGG: abu:Abu_0884 DNA repair protein RadA; SMART: AAA ATPase; SPTR: A8ET70 DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 2101885..2103234 Arcobacter nitrofigilis DSM 7299 9172277 YP_003656276.1 CDS Arnit_2115 NC_014166.1 2103249 2103653 R COGs: COG5496 thioesterase; KEGG: abu:Abu_0882 hypothetical protein; SPTR: A8ET68 Putative uncharacterized protein; hypothetical protein complement(2103249..2103653) Arcobacter nitrofigilis DSM 7299 9172278 YP_003656277.1 CDS Arnit_2116 NC_014166.1 2103771 2104190 D COGs: COG0319 metal-dependent hydrolase; InterPro IPR002036:IPR020549; KEGG: abu:Abu_0881 putative metalloprotease; PFAM: protein of unknown function UPF0054; SPTR: A8ET67 Putative metalloprotease Abu_0881; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043; hypothetical protein 2103771..2104190 Arcobacter nitrofigilis DSM 7299 9172279 YP_003656278.1 CDS Arnit_2117 NC_014166.1 2104191 2105111 D COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481:IPR004837; KEGG: nis:NIS_0785 calcium/cation antiporter; PFAM: sodium/calcium exchanger membrane region; SPTR: A6Q338 Calcium:H+/Na+ antiporter, CaCA family; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger (cax); K+-dependent Na+/Ca+ exchanger related-protein; CaCA family Na+/Ca+ antiporter 2104191..2105111 Arcobacter nitrofigilis DSM 7299 9172280 YP_003656279.1 CDS Arnit_2118 NC_014166.1 2105113 2105517 R COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: abu:Abu_0880 peroxide stress regulator; PFAM: ferric-uptake regulator; SPTR: A8ET66 Peroxide stress regulator; PFAM: Ferric uptake regulator family; Fur family ferric uptake regulator complement(2105113..2105517) Arcobacter nitrofigilis DSM 7299 9172281 YP_003656280.1 CDS Arnit_2119 NC_014166.1 2105765 2106202 D COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR009078:IPR002177:IPR008331:IPR012347; KEGG: wsu:WS1589 neutrophil-activating protein (neutrophil activating protein NapA)(fragment); PFAM: Ferritin Dps family protein; SPTR: C2A0Z2 DNA-binding ferritin-like protein (Oxidative damage protectant); PFAM: Ferritin-like domain; rerritin Dps family protein 2105765..2106202 Arcobacter nitrofigilis DSM 7299 9172282 YP_003656281.1 CDS Arnit_2120 NC_014166.1 2106280 2106933 D COGs: COG1592 Rubrerythrin; InterProIPR004462:IPR009078:IPR003251:IPR009040:IPR 012347:IPR004039; KEGG: sun:SUN_1880 rubrerythrin; PFAM: Rubrerythrin; Desulfoferrodoxin Dfx domain protein; SPTR: A6QBG8 Rubrerythrin; PFAM: Rubrerythrin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; rubrerythrin 2106280..2106933 Arcobacter nitrofigilis DSM 7299 9172283 YP_003656282.1 CDS Arnit_2121 NC_014166.1 2107014 2108567 D InterPro IPR005135; KEGG: abu:Abu_0879 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: A8ET65 Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 2107014..2108567 Arcobacter nitrofigilis DSM 7299 9172284 YP_003656283.1 CDS Arnit_2122 NC_014166.1 2108557 2109858 D COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: abu:Abu_0878 virulence factor MviN protein; PFAM: virulence factor MVIN family protein; SPTR: A8ET64 Virulence factor MviN protein; TIGRFAM: integral membrane protein MviN; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein MviN 2108557..2109858 Arcobacter nitrofigilis DSM 7299 9172285 YP_003656284.1 CDS Arnit_2123 NC_014166.1 2109927 2111636 D COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003593:IPR011527:IPR001140:IPR003439:IPR 017940:IPR017871; KEGG: abu:Abu_0877 multidrug resistance protein MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A8ET63 Multidrug resistance protein MsbA; PFAM: ABC transporter; ABC transporter transmembrane region; ABC transporter-like protein 2109927..2111636 Arcobacter nitrofigilis DSM 7299 9172286 YP_003656285.1 CDS Arnit_2124 NC_014166.1 2111692 2112753 D COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR005719:IPR012135:IPR013785:IPR001295; KEGG: abu:Abu_0876 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; PRIAM: Dihydroorotate oxidase; SPTR: A8ET62 Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; dihydroorotate dehydrogenase 2111692..2112753 Arcobacter nitrofigilis DSM 7299 9172287 YP_003656286.1 CDS Arnit_2125 NC_014166.1 2112824 2114104 D COGs: COG0612 Zn-dependent peptidase; InterProIPR011249:IPR011765:IPR007863:IPR011237:IPR 001431; KEGG: abu:Abu_0875 putative zinc protease; PFAM: peptidase M16 domain protein; SPTR: A8ET61 Putative zinc protease; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase M16 domain-containing protein 2112824..2114104 Arcobacter nitrofigilis DSM 7299 9172288 YP_003656287.1 CDS Arnit_2126 NC_014166.1 2114085 2114549 D COGs: COG2346 Truncated hemoglobins; InterPro IPR009050:IPR001486:IPR012292; KEGG: tdn:Suden_0993 globin; PFAM: globin; SPTR: Q30RW0 Truncated hemoglobin; PFAM: Bacterial-like globin; globin 2114085..2114549 Arcobacter nitrofigilis DSM 7299 9172289 YP_003656288.1 CDS Arnit_2127 NC_014166.1 2114559 2115446 D COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterProIPR005263:IPR002220:IPR013785:IPR020624:IPR 020625; KEGG: abu:Abu_0874 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: A8ET60 Dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 2114559..2115446 Arcobacter nitrofigilis DSM 7299 9172290 YP_003656289.1 CDS Arnit_2128 NC_014166.1 2115446 2116225 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002347:IPR002198; KEGG: abu:Abu_0873 7-alpha-hydroxysteroid dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8ET59 Oxidoreductase, short chain dehydrogenase/reductase family; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2115446..2116225 Arcobacter nitrofigilis DSM 7299 9172291 YP_003656290.1 CDS Arnit_2129 NC_014166.1 2116225 2116767 D COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570:IPR000462; KEGG: abu:Abu_0872 CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: A8ET58 CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 2116225..2116767 Arcobacter nitrofigilis DSM 7299 9172292 YP_003656291.1 CDS Arnit_2130 NC_014166.1 2116777 2117829 D COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478:IPR004387:IPR008915; KEGG: abu:Abu_0871 membrane-associated zinc metalloprotease, putative; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8ET57 Membrane-associated zinc metalloprotease, putative; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; membrane-associated zinc metalloprotease 2116777..2117829 Arcobacter nitrofigilis DSM 7299 9172293 YP_003656292.1 CDS Arnit_2131 NC_014166.1 2117838 2118518 D COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: abu:Abu_0870 hypothetical protein; PFAM: alanine racemase domain protein; SPTR: A8ET56 Putative uncharacterized protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; alanine racemase domain-containing protein 2117838..2118518 Arcobacter nitrofigilis DSM 7299 9172294 YP_003656293.1 CDS Arnit_2132 NC_014166.1 2118531 2118920 R KEGG: pph:Ppha_1332 hypothetical protein; SPTR: B4SHD0 Putative uncharacterized protein; hypothetical protein complement(2118531..2118920) Arcobacter nitrofigilis DSM 7299 9172295 YP_003656294.1 CDS Arnit_2133 NC_014166.1 2118921 2119463 R KEGG: abu:Abu_1148 hypothetical protein; SPTR: A8ETY4 Putative uncharacterized protein; hypothetical protein complement(2118921..2119463) Arcobacter nitrofigilis DSM 7299 9172296 YP_003656295.1 CDS Arnit_2134 NC_014166.1 2119542 2120249 R KEGG: gfo:GFO_3308 ZIP family metal transporter; SPTR: A0M6K6 ZIP family metal transporter; PFAM: ZIP Zinc transporter; ZIP family metal transporter complement(2119542..2120249) Arcobacter nitrofigilis DSM 7299 9172297 YP_003656296.1 CDS Arnit_2135 NC_014166.1 2120251 2121042 R COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR011060:IPR013798:IPR013785:IPR001468; KEGG: nis:NIS_0989 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: C2A353 Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase complement(2120251..2121042) Arcobacter nitrofigilis DSM 7299 9172298 YP_003656297.1 CDS Arnit_2136 NC_014166.1 2121039 2122298 R InterPro IPR019734:IPR013026:IPR011990; KEGG: abu:Abu_0851 hypothetical protein; SPTR: A8ET37 Putative uncharacterized protein; hypothetical protein complement(2121039..2122298) Arcobacter nitrofigilis DSM 7299 9172299 YP_003656298.1 CDS Arnit_2137 NC_014166.1 2122274 2122657 R InterPro IPR005358; KEGG: abu:Abu_0852 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: A8ET38 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein complement(2122274..2122657) Arcobacter nitrofigilis DSM 7299 9172300 YP_003656299.1 CDS Arnit_2138 NC_014166.1 2122654 2123364 R COGs: COG4123 O-methyltransferase; InterPro IPR007848:IPR002052; KEGG: abu:Abu_0853 hypothetical protein; PFAM: methyltransferase small; SPTR: A8ET39 Putative uncharacterized protein; PFAM: Methyltransferase small domain; methyltransferase small complement(2122654..2123364) Arcobacter nitrofigilis DSM 7299 9172301 YP_003656300.1 CDS Arnit_2139 NC_014166.1 2123522 2123836 D InterPro IPR001450:IPR017896:IPR017900; KEGG: abu:Abu_0854 2-oxoglutarate-acceptor oxidoreductase subunit OorD; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ET40 OorD subunit of 2-oxoglutarate:acceptor oxidoreductase; 4Fe-4S ferredoxin 2123522..2123836 Arcobacter nitrofigilis DSM 7299 9172302 YP_003656301.1 CDS Arnit_2140 NC_014166.1 2123839 2124969 D COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR009014:IPR002880:IPR015941; KEGG: abu:Abu_0855 2-oxoglutarate-acceptor oxidoreductase subunit OorA; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: A8ET41 OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; PFAM: domain; Transketolase, C-terminal domain; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2123839..2124969 Arcobacter nitrofigilis DSM 7299 9172303 YP_003656302.1 CDS Arnit_2141 NC_014166.1 2124971 2125804 D COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: cco:CCC13826_1293 2-oxoglutarate-acceptor oxidoreductase subunit OorB; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: C2A2C6 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate domain-containing TPP-binding protein 2124971..2125804 Arcobacter nitrofigilis DSM 7299 9172304 YP_003656303.1 CDS Arnit_2142 NC_014166.1 2125814 2126371 D COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR002869:IPR019752; KEGG: abu:Abu_0857 2-oxoglutarate-acceptor oxidoreductase subunit OorC; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: A8ET43 OorC subunit of 2-oxoglutarate:acceptor oxidoreductase; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase 2125814..2126371 Arcobacter nitrofigilis DSM 7299 9172305 YP_003656304.1 CDS Arnit_2143 NC_014166.1 2126638 2127504 R COGs: COG4461 Uncharacterized protein putative lipoprotein; InterPro IPR009739; KEGG: rbo:A1I_04335 hypothetical protein; PFAM: protein of unknown function DUF1311; SPTR: Q1RIU1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1311); hypothetical protein complement(2126638..2127504) Arcobacter nitrofigilis DSM 7299 9172306 YP_003656305.1 CDS Arnit_2144 NC_014166.1 2127501 2127635 R KEGG: hypothetical protein; SPTR: A0DWJ2 Chromosome undetermined scaffold_67, whole genome shotgun sequence; hypothetical protein complement(2127501..2127635) Arcobacter nitrofigilis DSM 7299 9172307 YP_003656306.1 CDS Arnit_2145 NC_014166.1 2127632 2128165 R KEGG: conserved hypothetical protein; SPTR: Q8I2P4 Putative uncharacterized protein; hypothetical protein complement(2127632..2128165) Arcobacter nitrofigilis DSM 7299 9172308 YP_003656307.1 CDS Arnit_2146 NC_014166.1 2128182 2128331 R KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein; hypothetical protein complement(2128182..2128331) Arcobacter nitrofigilis DSM 7299 9172309 YP_003656308.1 CDS Arnit_2148 NC_014166.1 2128690 2128842 R hypothetical protein complement(2128690..2128842) Arcobacter nitrofigilis DSM 7299 9172311 YP_003656309.1 CDS Arnit_2149 NC_014166.1 2128864 2129532 R KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein; hypothetical protein complement(2128864..2129532) Arcobacter nitrofigilis DSM 7299 9172312 YP_003656310.1 CDS Arnit_2150 NC_014166.1 2129529 2129651 R hypothetical protein complement(2129529..2129651) Arcobacter nitrofigilis DSM 7299 9172313 YP_003656311.1 CDS Arnit_2151 NC_014166.1 2129692 2130615 R KEGG: wbr:WGLp017 hypothetical protein; SPTR: Q8D3I4 Imp protein; hypothetical protein complement(2129692..2130615) Arcobacter nitrofigilis DSM 7299 9172314 YP_003656312.1 CDS Arnit_2152 NC_014166.1 2130612 2130746 R hypothetical protein complement(2130612..2130746) Arcobacter nitrofigilis DSM 7299 9172315 YP_003656313.1 CDS Arnit_2153 NC_014166.1 2130743 2130889 R hypothetical protein complement(2130743..2130889) Arcobacter nitrofigilis DSM 7299 9172316 YP_003656314.1 CDS Arnit_2154 NC_014166.1 2130906 2131568 R KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein; hypothetical protein complement(2130906..2131568) Arcobacter nitrofigilis DSM 7299 9172317 YP_003656315.1 CDS Arnit_2156 NC_014166.1 2132051 2133040 R KEGG: wbr:WGLp156 hypothetical protein; SPTR: B4YAY4 Ribosomal protein S3 (Fragment); hypothetical protein complement(2132051..2133040) Arcobacter nitrofigilis DSM 7299 9172319 YP_003656316.1 CDS Arnit_2157 NC_014166.1 2133392 2133934 R COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR006674; KEGG: syp:SYNPCC7002_A0721 HD domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: A1ZHK7 Guanosine polyphosphate pyrophosphohydrolase/synthetase; metal dependent phosphohydrolase complement(2133392..2133934) Arcobacter nitrofigilis DSM 7299 9172320 YP_003656317.1 CDS Arnit_2158 NC_014166.1 2133934 2134773 R COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055:IPR006054:IPR012337:IPR013520; KEGG: abu:Abu_0858 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: A8ET44 DNA polymerase III; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III subunit epsilon complement(2133934..2134773) Arcobacter nitrofigilis DSM 7299 9172321 YP_003656318.1 CDS Arnit_2159 NC_014166.1 2134763 2135353 R COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR011060:IPR001240:IPR013785; KEGG: abu:Abu_0859 N-(5'phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: A8ET45 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase complement(2134763..2135353) Arcobacter nitrofigilis DSM 7299 9172322 YP_003656319.1 CDS Arnit_2160 NC_014166.1 2135355 2135996 R COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056:IPR011060:IPR013785; KEGG: abu:Abu_0860 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: A8ET46 Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(2135355..2135996) Arcobacter nitrofigilis DSM 7299 9172323 YP_003656320.1 CDS Arnit_2161 NC_014166.1 2136095 2137105 D COGs: COG2829 Outer membrane phospholipase A; InterPro IPR003187; KEGG: abu:Abu_0861 outer membrane phospholipase A; PFAM: phospholipase A1; PRIAM: Phospholipase A(2); SPTR: A8ET47 Outer membrane phospholipase A; PFAM: Phospholipase A1; phospholipase A(2) 2136095..2137105 Arcobacter nitrofigilis DSM 7299 9172324 YP_003656321.1 CDS Arnit_2162 NC_014166.1 2137168 2137404 D KEGG: bth:BT_1694 AcrB/AcrD/AcrF family transporter; SPTR: Q1VZP0 Sensor protein; hypothetical protein 2137168..2137404 Arcobacter nitrofigilis DSM 7299 9172325 YP_003656322.1 CDS Arnit_2163 NC_014166.1 2137452 2138486 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR009082:IPR003661:IPR005467; KEGG: sun:SUN_2242 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A6QCH3 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(2137452..2138486) Arcobacter nitrofigilis DSM 7299 9172326 YP_003656323.1 CDS Arnit_2164 NC_014166.1 2138473 2139117 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR016032; KEGG: sun:SUN_0781 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B6BHV9 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; response regulator receiver protein complement(2138473..2139117) Arcobacter nitrofigilis DSM 7299 9172327 YP_003656324.1 CDS Arnit_2165 NC_014166.1 2139114 2139371 R KEGG: chromosome assembly protein ; K06675 structural maintenance of chromosome 4; SPTR: D0DFA7 Acyltransferase; hypothetical protein complement(2139114..2139371) Arcobacter nitrofigilis DSM 7299 9172328 YP_003656325.1 CDS Arnit_2166 NC_014166.1 2139368 2139802 R KEGG: conserved hypothetical protein; SPTR: Q7RNC3 Putative uncharacterized protein PY01897 (Fragment); hypothetical protein complement(2139368..2139802) Arcobacter nitrofigilis DSM 7299 9172329 YP_003656326.1 CDS Arnit_2167 NC_014166.1 2140047 2140289 D KEGG: ajs:Ajs_0198 type III restriction system endonuclease, putative; SPTR: A1W2H8 Type III restriction system endonuclease, putative; type III restriction system endonuclease 2140047..2140289 Arcobacter nitrofigilis DSM 7299 9172330 YP_003656327.1 CDS Arnit_2168 NC_014166.1 2140589 2142145 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_1441 GGDEF/PAS domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: B6BML0 GGDEF domain/pas/pac sensor domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2140589..2142145 Arcobacter nitrofigilis DSM 7299 9172331 YP_003656328.1 CDS Arnit_2169 NC_014166.1 2142158 2142610 R KEGG: abu:Abu_1112 hypothetical protein; SPTR: A8ETU8 Putative uncharacterized protein; hypothetical protein complement(2142158..2142610) Arcobacter nitrofigilis DSM 7299 9172332 YP_003656329.1 CDS Arnit_2170 NC_014166.1 2142745 2143320 R InterPro IPR004385:IPR015797:IPR000086; KEGG: abu:Abu_0863 hypothetical protein; PFAM: NUDIX hydrolase; PRIAM: UDP-sugar diphosphatase; SPTR: A8ET49 Putative uncharacterized protein; PFAM: NUDIX domain; TIGRFAM: nudix hydrolase, YffH family; UDP-sugar diphosphatase complement(2142745..2143320) Arcobacter nitrofigilis DSM 7299 9172333 YP_003656330.1 CDS Arnit_2171 NC_014166.1 2143420 2144010 D KEGG: abu:Abu_1296 hypothetical protein; SPTR: A8EUC9 Putative uncharacterized protein; hypothetical protein 2143420..2144010 Arcobacter nitrofigilis DSM 7299 9172334 YP_003656331.1 CDS Arnit_2172 NC_014166.1 2144000 2145172 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR009082:IPR004358:IPR 005467; KEGG: abu:Abu_0061 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EQX2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(2144000..2145172) Arcobacter nitrofigilis DSM 7299 9172335 YP_003656332.1 CDS Arnit_2173 NC_014166.1 2145159 2145824 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: sun:SUN_0788 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A6Q8D7 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(2145159..2145824) Arcobacter nitrofigilis DSM 7299 9172336 YP_003656333.1 CDS Arnit_2174 NC_014166.1 2145840 2146340 R COGs: COG1666 conserved hypothetical protein; InterPro IPR007551; KEGG: abu:Abu_0864 hypothetical protein; PFAM: protein of unknown function DUF520; SPTR: A8ET50 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF520); hypothetical protein complement(2145840..2146340) Arcobacter nitrofigilis DSM 7299 9172337 YP_003656334.1 CDS Arnit_2175 NC_014166.1 2146423 2146824 R COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: abu:Abu_0866 hypothetical protein; PFAM: protein of unknown function DUF423; SPTR: A8ET52 Conserved hypothetical membrane protein (DUF423); PFAM: Protein of unknown function (DUF423); hypothetical protein complement(2146423..2146824) Arcobacter nitrofigilis DSM 7299 9172338 YP_003656335.1 CDS Arnit_2176 NC_014166.1 2146872 2147141 R KEGG: bcm:Bcenmc03_4031 hypothetical protein; SPTR: B6BHY1 Putative uncharacterized protein; hypothetical protein complement(2146872..2147141) Arcobacter nitrofigilis DSM 7299 9172339 YP_003656336.1 CDS Arnit_2177 NC_014166.1 2147206 2147655 R COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: abu:Abu_0867 putative nucleotide phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: A8ET53 Putative nucleotide phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; phosphoribosyltransferase complement(2147206..2147655) Arcobacter nitrofigilis DSM 7299 9172340 YP_003656337.1 CDS Arnit_2178 NC_014166.1 2147659 2148957 R COGs: COG2252 Permease; InterPro IPR006043; KEGG: tcx:Tcr_0399 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Q31IM8 Nucleobase:cation symporter-2 (NCS2) family transporter; PFAM: Permease family; xanthine/uracil/vitamin C permease complement(2147659..2148957) Arcobacter nitrofigilis DSM 7299 9172341 YP_003656338.1 CDS Arnit_2179 NC_014166.1 2149126 2149983 D COGs: COG1578 conserved hypothetical protein; InterPro IPR002791:IPR014444; KEGG: tdn:Suden_1861 hypothetical protein; PFAM: protein of unknown function DUF89; SPTR: B6BI22 Putative uncharacterized protein; PFAM: Protein of unknown function DUF89; hypothetical protein 2149126..2149983 Arcobacter nitrofigilis DSM 7299 9172342 YP_003656339.1 CDS Arnit_2180 NC_014166.1 2149984 2150343 R KEGG: abu:Abu_1459 hypothetical protein; SPTR: A8EUU0 Putative uncharacterized protein; hypothetical protein complement(2149984..2150343) Arcobacter nitrofigilis DSM 7299 9172343 YP_003656340.1 CDS Arnit_2181 NC_014166.1 2150419 2151096 D COGs: COG2360 Leu/Phe-tRNA-protein transferase; InterPro IPR004616; KEGG: abu:Abu_1095 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; PRIAM: Leucyltransferase; SPTR: A8ETT1 Leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 2150419..2151096 Arcobacter nitrofigilis DSM 7299 9172344 YP_003656341.1 CDS Arnit_2182 NC_014166.1 2151091 2152458 R COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterProIPR000524:IPR015424:IPR004839:IPR011991:IPR 015421; KEGG: sun:SUN_0922 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; SPTR: A6Q8S1 Transcriptional regulator, GntR family; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; GntR family transcriptional regulator complement(2151091..2152458) Arcobacter nitrofigilis DSM 7299 9172345 YP_003656342.1 CDS Arnit_2183 NC_014166.1 2152547 2154124 D COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006657; KEGG: tdn:Suden_1255 molybdopterin oxidoreductase; PFAM: molydopterin dinucleotide-binding region; SPTR: Q30R48 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; molybdopterin dinucleotide-binding region 2152547..2154124 Arcobacter nitrofigilis DSM 7299 9172346 YP_003656343.1 CDS Arnit_2184 NC_014166.1 2154136 2154717 D COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818; KEGG: amr:AM1_1046 DJ-1/PfpI family protein; PFAM: ThiJ/PfpI domain protein; SPTR: B0C1S0 DJ-1/PfpI family protein; PFAM: DJ-1/PfpI family; ThiJ/PfpI domain-containing protein 2154136..2154717 Arcobacter nitrofigilis DSM 7299 9172347 YP_003656344.1 CDS Arnit_2185 NC_014166.1 2154727 2155326 D COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR009002:IPR012349; KEGG: sun:SUN_0949 hypothetical protein; SPTR: A6Q8U8 Putative uncharacterized protein; PFAM: Pyridoxamine 5'-phosphate oxidase; hypothetical protein 2154727..2155326 Arcobacter nitrofigilis DSM 7299 9172348 YP_003656345.1 CDS Arnit_2186 NC_014166.1 2155358 2155930 D InterPro IPR013217; KEGG: sun:SUN_0643 tellurite resistance protein TehB; PFAM: Methyltransferase type 12; SPTR: B6BJV2 Tellurite resistance protein TehB; PFAM: Tellurite resistance protein TehB; type 12 methyltransferase 2155358..2155930 Arcobacter nitrofigilis DSM 7299 9172349 YP_003656346.1 CDS Arnit_2187 NC_014166.1 2155963 2156532 R COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: wsu:WS1166 NADP(H) oxidoreductase; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: Q7M966 NADP(H) OXIDOREDUCTASE; PFAM: Flavodoxin-like fold; NAD(P)H dehydrogenase complement(2155963..2156532) Arcobacter nitrofigilis DSM 7299 9172350 YP_003656347.1 CDS Arnit_2188 NC_014166.1 2156647 2157426 R COGs: COG1010 Precorrin-3B methylase; InterPro IPR000878:IPR014777; KEGG: ppd:Ppro_0871 cobyric acid synthase CobQ; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Precorrin-3B C(17)-methyltransferase; SPTR: C6MS21 Cobyric acid synthase CobQ; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase complement(2156647..2157426) Arcobacter nitrofigilis DSM 7299 9172351 YP_003656348.1 CDS Arnit_2189 NC_014166.1 2157426 2158442 R COGs: COG2073 Cobalamin biosynthesis protein CbiG; InterPro IPR002750; KEGG: gbm:Gbem_3540 cobalamin (vitamin B12) biosynthesis CbiG protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; SPTR: C3WNH0 Cobalamin biosynthesis protein CbiG; PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal; cobalamin (vitamin B12) biosynthesis protein CbiG complement(2157426..2158442) Arcobacter nitrofigilis DSM 7299 9172352 YP_003656349.1 CDS Arnit_2190 NC_014166.1 2158436 2159179 R COGs: COG2875 Precorrin-4 methylase; InterPro IPR000878:IPR014777:IPR014776:IPR003043; KEGG: tme:Tmel_0702 precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Precorrin-4 C(11)-methyltransferase; SPTR: A6LKW5 Precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase; precorrin-4 C(11)-methyltransferase complement(2158436..2159179) Arcobacter nitrofigilis DSM 7299 9172353 YP_003656350.1 CDS Arnit_2191 NC_014166.1 2159176 2160348 R COGs: COG2242 Precorrin-6B methylase 2; InterPro IPR000878; KEGG: dal:Dalk_0449 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; SPTR: B8FH68 Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit; PFAM: Conserved hypothetical protein 95; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6B methylase 2 complement(2159176..2160348) Arcobacter nitrofigilis DSM 7299 9172354 YP_003656351.1 CDS Arnit_2192 NC_014166.1 2160342 2161364 R COGs: COG1903 Cobalamin biosynthesis protein CbiD; InterPro IPR002748; KEGG: mmp:MMP1203 cobalt-precorrin-6A synthase; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; SPTR: P61988 Putative cobalt-precorrin-6A synthase [deacetylating]; PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD; cobalamin (vitamin B12) biosynthesis protein CbiD complement(2160342..2161364) Arcobacter nitrofigilis DSM 7299 9172355 YP_003656352.1 CDS Arnit_2193 NC_014166.1 2161364 2161813 R InterPro IPR012335; KEGG: vsp:VS_2665 cobalamin biosynthesis protein; SPTR: A3XXS7 Cobalamin biosynthesis protein; cobalamin biosynthesis protein complement(2161364..2161813) Arcobacter nitrofigilis DSM 7299 9172356 YP_003656353.1 CDS Arnit_2194 NC_014166.1 2161803 2162513 R COGs: COG2082 Precorrin isomerase; InterPro IPR003722; KEGG: taf:THA_1067 cobalt-precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH; SPTR: A5TUT1 Precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase; precorrin-8X methylmutase CbiC/CobH complement(2161803..2162513) Arcobacter nitrofigilis DSM 7299 9172357 YP_003656354.1 CDS Arnit_2195 NC_014166.1 2162513 2163205 R COGs: COG2243 Precorrin-2 methylase; InterPro IPR000878:IPR014777; KEGG: cac:CAC1379 cobalt-precorrin-2 C(20)-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: B1B8I3 Precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase complement(2162513..2163205) Arcobacter nitrofigilis DSM 7299 9172358 YP_003656355.1 CDS Arnit_2196 NC_014166.1 2163195 2164013 R COGs: COG4822 Cobalamin biosynthesis protein CbiK Co2+ chelatase; InterPro IPR010388; KEGG: vsp:VS_2666 putative cobalt chelatase; PFAM: anaerobic cobalt chelatase; SPTR: A3XXS8 Anaerobic cobalt chelatase cbiK; PFAM: Cobalt chelatase (CbiK); anaerobic cobalt chelatase complement(2163195..2164013) Arcobacter nitrofigilis DSM 7299 9172359 YP_003656356.1 CDS Arnit_2197 NC_014166.1 2164000 2164698 R KEGG: mmw:Mmwyl1_1388 hypothetical protein; SPTR: A6VV38 Putative uncharacterized protein; hypothetical protein complement(2164000..2164698) Arcobacter nitrofigilis DSM 7299 9172360 YP_003656357.1 CDS Arnit_2198 NC_014166.1 2165093 2165197 D KEGG: dfe:Dfer_0547 hypothetical protein; SPTR: C6W078 Putative uncharacterized protein; hypothetical protein 2165093..2165197 Arcobacter nitrofigilis DSM 7299 9172361 YP_003656358.1 CDS Arnit_2199 NC_014166.1 2165212 2166033 R COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: bac:BamMC406_1112 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: A6D2K7 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase complement(2165212..2166033) Arcobacter nitrofigilis DSM 7299 9172362 YP_003656359.1 CDS Arnit_2200 NC_014166.1 2166030 2167100 R COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterProIPR003593:IPR008995:IPR003439:IPR013611:IPR 017871; KEGG: bpy:Bphyt_2651 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: B1G958 ABC transporter related; PFAM: ABC transporter; TOBE domain; ABC transporter-like protein complement(2166030..2167100) Arcobacter nitrofigilis DSM 7299 9172363 YP_003656360.1 CDS Arnit_2201 NC_014166.1 2167100 2167924 R COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: rpc:RPC_1271 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6D2K5 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(2167100..2167924) Arcobacter nitrofigilis DSM 7299 9172364 YP_003656361.1 CDS Arnit_2202 NC_014166.1 2167929 2168750 R COGs: COG0555 ABC-type sulfate transport system permease component; InterPro IPR000515; KEGG: bra:BRADO5361 putative permease protein; putative membrane protein; putative exported protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A4YYR4 Putative permease protein; putative membrane protein; putative exported protein; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(2167929..2168750) Arcobacter nitrofigilis DSM 7299 9172365 YP_003656362.1 CDS Arnit_2203 NC_014166.1 2168859 2169881 R COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: bav:BAV3354 ABC transporter, substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Q2KTP6 ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein; family 1 extracellular solute-binding protein complement(2168859..2169881) Arcobacter nitrofigilis DSM 7299 9172366 YP_003656363.1 CDS Arnit_2204 NC_014166.1 2169996 2171006 R COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR010982:IPR001761:IPR001387; KEGG: bpr:GBP346_A1440 transcriptional repressor, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C4KUX3 Transcriptional repressor, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(2169996..2171006) Arcobacter nitrofigilis DSM 7299 9172367 YP_003656364.1 CDS Arnit_2205 NC_014166.1 2171101 2174475 R COGs: COG2199 FOG: GGDEF domain; InterProIPR001638:IPR001610:IPR000160:IPR000014:IPR 015168:IPR013655:IPR000700; KEGG: wsu:WS0850 sensory transduction histidine kinase; PFAM: GGDEF domain containing protein; NMT1/THI5 like domain protein; extracellular solute-binding protein family 3; PAS fold-3 domain protein; SMART: GGDEF domain containing protein; extracellular solute-binding protein family 3; PAC repeat-containing protein; SPTR: Q2BQ31 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; NMT1/THI5 like; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS/PAC sensor-containg diguanylate cyclase complement(2171101..2174475) Arcobacter nitrofigilis DSM 7299 9172368 YP_003656365.1 CDS Arnit_2206 NC_014166.1 2174571 2175401 R COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterProIPR018060:IPR014048:IPR009057:IPR000005:IPR 012287:IPR011991:IPR001497; KEGG: abu:Abu_1461 O6-methylguanine-DNA methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EUU2 O6-methylguanine-DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase; AraC family transcriptional regulator complement(2174571..2175401) Arcobacter nitrofigilis DSM 7299 9172369 YP_003656366.1 CDS Arnit_2207 NC_014166.1 2175453 2175947 R InterPro IPR012336:IPR000866:IPR017936:IPR012335; KEGG: tdn:Suden_0501 putative thioredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Q30TA0 Thioredoxin; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(2175453..2175947) Arcobacter nitrofigilis DSM 7299 9172370 YP_003656367.1 CDS Arnit_2208 NC_014166.1 2176130 2177116 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR009057:IPR020449:IPR000005:IPR 018062; KEGG: ccv:CCV52592_1805 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C2A120 DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 2176130..2177116 Arcobacter nitrofigilis DSM 7299 9172371 YP_003656368.1 CDS Arnit_2209 NC_014166.1 2177700 2179793 D COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR009081:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: B4VZJ3 AMP-binding enzyme domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; AMP-dependent synthetase and ligase 2177700..2179793 Arcobacter nitrofigilis DSM 7299 9172372 YP_003656369.1 CDS Arnit_2210 NC_014166.1 2179790 2187499 D COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR010071:IPR016039:IPR016035:IPR016040:IPR 009081:IPR016036:IPR014030:IPR014031:IPR013968:IPR006163:I PR014043:IPR001242:IPR013624:IPR000873:IPR016038:IPR001227 :IPR020845:IPR018201; KEGG: cce:Ccel_0979 amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase ; KR domain protein; phosphopantetheine-binding; Acyl transferase; condensation domain protein; Non-ribosomal peptide synthetase; SPTR: A3INX3 Non-ribosomal peptide synthase/polyketide synthase; TIGRFAM: amino acid adenylation domain protein; PFAM: Acyl transferase domain; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; TIGRFAM: amino acid adenylation domain; amino acid adenylation domain-containing protein 2179790..2187499 Arcobacter nitrofigilis DSM 7299 9172373 YP_003656370.1 CDS Arnit_2211 NC_014166.1 2187518 2192191 D COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR016039:IPR016035:IPR016040:IPR009081:IPR 014030:IPR014031:IPR014043:IPR013968:IPR006163:IPR016038:I PR001227; KEGG: npu:Npun_R3024 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase ; Acyl transferase; KR domain protein; phosphopantetheine-binding; SPTR: Q6E7J4 JamP; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase 2187518..2192191 Arcobacter nitrofigilis DSM 7299 9172374 YP_003656371.1 CDS Arnit_2212 NC_014166.1 2192205 2195603 D COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR020459:IPR001242:IPR 013624:IPR000873:IPR006163:IPR020845; KEGG: npu:Npun_CR074 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Non-ribosomal peptide synthetase; phosphopantetheine-binding; SPTR: Q8GAQ3 BarG; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain; amino acid adenylation domain-containing protein 2192205..2195603 Arcobacter nitrofigilis DSM 7299 9172375 YP_003656372.1 CDS Arnit_2213 NC_014166.1 2195593 2205309 D COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR010071:IPR016039:IPR016035:IPR016040:IPR 009081:IPR016036:IPR014030:IPR014031:IPR014043:IPR013217:I PR013968:IPR006163:IPR001242:IPR013624:IPR000873:IPR001031 :IPR016038:IPR001227:IPR006162:IPR020845:IPR018201; KEGG: pmr:PMI2600 non-ribosomal peptide synthase (siderophore synthase); PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase ; Acyl transferase; Methyltransferase type 12; KR domain protein; phosphopantetheine-binding; condensation domain protein; Non-ribosomal peptide synthetase; Thioesterase; SPTR: B4EXX8 Putative non-ribosomal peptide synthase (Putative siderophore synthase); TIGRFAM: amino acid adenylation domain protein; PFAM: Acyl transferase domain; Methyltransferase domain; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; Thioesterase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; TIGRFAM: amino acid adenylation domain; amino acid adenylation domain-containing protein 2195593..2205309 Arcobacter nitrofigilis DSM 7299 9172376 YP_003656373.1 CDS Arnit_2214 NC_014166.1 2205316 2206059 D COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: bbe:BBR47_28880 putative type II thioesterase; PFAM: Thioesterase; PRIAM: Oleoyl-[acyl-carrier-protein] hydrolase; SPTR: Q8G988 Microcystin synthetase associated thioesterase; PFAM: Thioesterase domain; oleoyl-(acyl-carrier-protein) hydrolase 2205316..2206059 Arcobacter nitrofigilis DSM 7299 9172377 YP_003656374.1 CDS Arnit_2215 NC_014166.1 2206087 2207448 D COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR010085:IPR011032:IPR016040:IPR013154:IPR 013149; KEGG: nca:Noca_1795 crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Q53865 Crotonyl CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: crotonyl-CoA reductase; crotonyl-CoA reductase 2206087..2207448 Arcobacter nitrofigilis DSM 7299 9172378 YP_003656375.1 CDS Arnit_2216 NC_014166.1 2207451 2208143 R COGs: COG2091 Phosphopantetheinyl transferase; InterPro IPR008278; KEGG: ter:Tery_4684 phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Q10VS6 Phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase superfamily; 4'-phosphopantetheinyl transferase complement(2207451..2208143) Arcobacter nitrofigilis DSM 7299 9172379 YP_003656376.1 CDS Arnit_2217 NC_014166.1 2208285 2210369 R COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010105:IPR012910:IPR000531; KEGG: abu:Abu_0340 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8ERP1 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(2208285..2210369) Arcobacter nitrofigilis DSM 7299 9172380 YP_003656377.1 CDS Arnit_2218 NC_014166.1 2210667 2211431 D KEGG: sun:SUN_0941 hypothetical protein; SPTR: A5L4N1 Hyopothetical protein; PFAM: Protein of unknown function (DUF1329); hypothetical protein 2210667..2211431 Arcobacter nitrofigilis DSM 7299 9172381 YP_003656378.1 CDS Arnit_2219 NC_014166.1 2211435 2212586 D KEGG: sun:SUN_0942 hypothetical protein; SPTR: A6Q8U1 Putative uncharacterized protein; hypothetical protein 2211435..2212586 Arcobacter nitrofigilis DSM 7299 9172382 YP_003656379.1 CDS Arnit_2220 NC_014166.1 2212608 2214905 D COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: sun:SUN_0943 RND efflux transporter; SPTR: A6Q8U2 Efflux transporter, RND superfamily; PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; RND efflux transporter 2212608..2214905 Arcobacter nitrofigilis DSM 7299 9172383 YP_003656380.1 CDS Arnit_2221 NC_014166.1 2215048 2217312 D COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR004514:IPR011035:IPR003789:IPR020060:IPR 020058:IPR020059:IPR018027:IPR020061:IPR020056:IPR001412; KEGG: sun:SUN_1139 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; Asn/Gln amidotransferase; SPTR: A6Q9D5 Glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; GatB domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 2215048..2217312 Arcobacter nitrofigilis DSM 7299 9172384 YP_003656381.1 CDS Arnit_2222 NC_014166.1 2217464 2217793 D KEGG: Os01g0356800; hypothetical protein; SPTR: B6BLG0 Putative uncharacterized protein; hypothetical protein 2217464..2217793 Arcobacter nitrofigilis DSM 7299 9172385 YP_003656382.1 CDS Arnit_2223 NC_014166.1 2217790 2218251 R KEGG: abu:Abu_0915 hypothetical protein; SPTR: A8ETA1 Putative uncharacterized protein; hypothetical protein complement(2217790..2218251) Arcobacter nitrofigilis DSM 7299 9172386 YP_003656383.1 CDS Arnit_2224 NC_014166.1 2218350 2218748 R KEGG: abu:Abu_0527 hypothetical protein; SPTR: A8ES70 Putative uncharacterized protein; hypothetical protein complement(2218350..2218748) Arcobacter nitrofigilis DSM 7299 9172387 YP_003656384.1 CDS Arnit_2225 NC_014166.1 2218936 2220624 D COGs: COG0397 conserved hypothetical protein; InterPro IPR003846; KEGG: abu:Abu_0916 hypothetical protein; PFAM: protein of unknown function UPF0061; SPTR: A8ETA2 Putative uncharacterized protein; PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein 2218936..2220624 Arcobacter nitrofigilis DSM 7299 9172388 YP_003656385.1 CDS Arnit_2226 NC_014166.1 2220708 2221187 D KEGG: hhe:HH1096 hypothetical protein; SPTR: Q7VH71 Putative uncharacterized protein; hypothetical protein 2220708..2221187 Arcobacter nitrofigilis DSM 7299 9172389 YP_003656386.1 CDS Arnit_2227 NC_014166.1 2221238 2221567 D KEGG: hypothetical protein ; K02324 DNA polymerase epsilon subunit 1; SPTR: C1I483 DNA/RNA helicase; hypothetical protein 2221238..2221567 Arcobacter nitrofigilis DSM 7299 9172390 YP_003656387.1 CDS Arnit_2228 NC_014166.1 2221719 2222525 R KEGG: vha:VIBHAR_02004 hypothetical protein; SPTR: A7MW77 Putative uncharacterized protein; hypothetical protein complement(2221719..2222525) Arcobacter nitrofigilis DSM 7299 9172391 YP_003656388.1 CDS Arnit_2229 NC_014166.1 2223023 2223931 R COGs: COG0731 Fe-S oxidoreductase; InterPro IPR007197; KEGG: abu:Abu_1785 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A8EVQ2 Radical SAM domain protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(2223023..2223931) Arcobacter nitrofigilis DSM 7299 9172394 YP_003656389.1 CDS Arnit_2230 NC_014166.1 2223931 2224962 R COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR006361:IPR000257; KEGG: abu:Abu_1786 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: A8EVQ3 Uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase complement(2223931..2224962) Arcobacter nitrofigilis DSM 7299 9172395 YP_003656390.1 CDS Arnit_2231 NC_014166.1 2224985 2225524 R COGs: COG2862 membrane protein; InterPro IPR005134; KEGG: abu:Abu_1787 putative integral membrane protein; PFAM: conserved hypothetical protein; SPTR: B6BJD3 Uncharacterized protein family, UPF0114; PFAM: Uncharacterized protein family, UPF0114; TIGRFAM: conserved hypothetical transmembrane protein; hypothetical protein complement(2224985..2225524) Arcobacter nitrofigilis DSM 7299 9172396 YP_003656391.1 CDS Arnit_2232 NC_014166.1 2225497 2226534 R COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterProIPR005986:IPR016040:IPR012080:IPR000534:IPR 012280:IPR000319; KEGG: abu:Abu_1788 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: A8EVQ5 Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); aspartate-semialdehyde dehydrogenase complement(2225497..2226534) Arcobacter nitrofigilis DSM 7299 9172397 YP_003656392.1 CDS Arnit_2233 NC_014166.1 2226537 2229107 R COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterProIPR002205:IPR005743:IPR013760:IPR006691:IPR 013758:IPR013757:IPR008162; KEGG: abu:Abu_1789 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: A1BPQ8 DNA gyrase subunit A (Fragment); TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A complement(2226537..2229107) Arcobacter nitrofigilis DSM 7299 9172398 YP_003656393.1 CDS Arnit_2234 NC_014166.1 2229222 2229443 R KEGG: abu:Abu_1790 hypothetical protein; SPTR: A8EVQ7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF465); hypothetical protein complement(2229222..2229443) Arcobacter nitrofigilis DSM 7299 9172399 YP_003656394.1 CDS Arnit_2235 NC_014166.1 2229623 2230804 R COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813:IPR016117; KEGG: abu:Abu_1791 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: A8EVQ8 Bifunctional ornithine acetyltransferase / N-acetylglutamate synthase; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; arginine biosynthesis bifunctional protein ArgJ complement(2229623..2230804) Arcobacter nitrofigilis DSM 7299 9172400 YP_003656395.1 CDS Arnit_2236 NC_014166.1 2230804 2231934 R COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR013099:IPR003148:IPR006037; KEGG: abu:Abu_1792 potassium channel protein, putative; PFAM: Ion transport 2 domain protein ; TrkA-N domain protein; TrkA-C domain protein; SPTR: A8EVQ9 Potassium channel protein, putative; PFAM: TrkA-N domain; Ion channel; TrkA-C domain; Ion transport 2 domain-containing protein complement(2230804..2231934) Arcobacter nitrofigilis DSM 7299 9172401 YP_003656396.1 CDS Arnit_2237 NC_014166.1 2231961 2232149 R COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: tdn:Suden_1602 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: B6BKX2 Ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 complement(2231961..2232149) Arcobacter nitrofigilis DSM 7299 9172402 YP_003656397.1 CDS Arnit_2238 NC_014166.1 2232210 2233082 R InterPro IPR001296; KEGG: abu:Abu_1794 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: A8EVR1 Putative uncharacterized protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2232210..2233082) Arcobacter nitrofigilis DSM 7299 9172403 YP_003656398.1 CDS Arnit_2239 NC_014166.1 2233075 2234001 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011910:IPR002201; KEGG: abu:Abu_1800 lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: A8EVR7 Lipopolysaccharide heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II complement(2233075..2234001) Arcobacter nitrofigilis DSM 7299 9172404 YP_003656399.1 CDS Arnit_2240 NC_014166.1 2233985 2235025 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nam:NAMH_1714 WabG; PFAM: glycosyl transferase group 1; SPTR: B9L6V6 WabG; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2233985..2235025) Arcobacter nitrofigilis DSM 7299 9172405 YP_003656400.1 CDS Arnit_2241 NC_014166.1 2234988 2236361 R InterPro IPR007016; KEGG: ent:Ent638_0111 hypothetical protein; PFAM: O-antigen polymerase; SPTR: A4W521 Putative uncharacterized protein; O-antigen polymerase complement(2234988..2236361) Arcobacter nitrofigilis DSM 7299 9172406 YP_003656401.1 CDS Arnit_2242 NC_014166.1 2236388 2237476 D COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: wsu:WS0253 hypothetical protein; PFAM: glycosyl transferase family 9; SPTR: Q7MSP3 Putative uncharacterized protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase); family 9 glycosyl transferase 2236388..2237476 Arcobacter nitrofigilis DSM 7299 9172407 YP_003656402.1 CDS Arnit_2244 NC_014166.1 2238553 2239044 R COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR011004:IPR001451; KEGG: mba:Mbar_B3758 hypothetical protein; SPTR: A5ZDF4 Putative uncharacterized protein; PFAM: Bacterial transferase hexapeptide (three repeats); isoleucine patch superfamily acetyltransferase complement(2238553..2239044) Arcobacter nitrofigilis DSM 7299 9172409 YP_003656403.1 CDS Arnit_2245 NC_014166.1 2239061 2240170 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: nam:NAMH_1718 glycosyl transferase, family 9; PFAM: glycosyl transferase family 9; SPTR: B9L6W0 Glycosyl transferase, family 9; PFAM: Glycosyltransferase family 9 (heptosyltransferase); family 9 glycosyl transferase complement(2239061..2240170) Arcobacter nitrofigilis DSM 7299 9172410 YP_003656404.1 CDS Arnit_2246 NC_014166.1 2240160 2241113 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: nam:NAMH_1719 putative heptosyliii transferase; PFAM: glycosyl transferase family 9; SPTR: B9L6W1 Putative heptosyliii transferase; PFAM: Glycosyltransferase family 9 (heptosyltransferase); family 9 glycosyl transferase complement(2240160..2241113) Arcobacter nitrofigilis DSM 7299 9172411 YP_003656405.1 CDS Arnit_2247 NC_014166.1 2241113 2241874 R COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: wsu:WS1905 xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase; SPTR: Q7M836 XYLANASE/CHITIN DEACETYLASE; PFAM: Polysaccharide deacetylase; polysaccharide deacetylase complement(2241113..2241874) Arcobacter nitrofigilis DSM 7299 9172412 YP_003656406.1 CDS Arnit_2248 NC_014166.1 2241871 2242935 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: wsu:WS0250 galactosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q7MAH3 PROBABLE GALACTOSYLTRANSFERASE; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2241871..2242935) Arcobacter nitrofigilis DSM 7299 9172413 YP_003656407.1 CDS Arnit_2249 NC_014166.1 2242928 2244034 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011916:IPR002201; KEGG: nam:NAMH_1721 putative lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9; SPTR: B9L6W3 Putative lipopolysaccharide heptosyltransferase III; TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; lipopolysaccharide heptosyltransferase III complement(2242928..2244034) Arcobacter nitrofigilis DSM 7299 9172414 YP_003656408.1 CDS Arnit_2250 NC_014166.1 2244031 2244744 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: nam:NAMH_1722 lipopolysaccharide core biosynthesis glycosyl transferase WaaE; PFAM: glycosyl transferase family 2; SPTR: B9L6W4 Lipopolysaccharide core biosynthesis glycosyl transferase WaaE; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(2244031..2244744) Arcobacter nitrofigilis DSM 7299 9172415 YP_003656409.1 CDS Arnit_2251 NC_014166.1 2244725 2245615 R COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: cff:CFF8240_1400 lipid A biosynthesis lauroyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: C1ZZK6 Lauroyl/myristoyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(2244725..2245615) Arcobacter nitrofigilis DSM 7299 9172416 YP_003656410.1 CDS Arnit_2252 NC_014166.1 2245608 2246618 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011908:IPR002201; KEGG: abu:Abu_1822 lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; SPTR: A8EVT9 Lipopolysaccharide heptosyltransferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I complement(2245608..2246618) Arcobacter nitrofigilis DSM 7299 9172417 YP_003656411.1 CDS Arnit_2253 NC_014166.1 2246622 2248091 R COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: abu:Abu_1823 guanosine pentaphosphate phosphohydrolase (GppA); PFAM: Ppx/GppA phosphatase; SPTR: A8EVU0 Guanosine pentaphosphate phosphohydrolase (GppA); PFAM: Ppx/GppA phosphatase family; Ppx/GppA phosphatase complement(2246622..2248091) Arcobacter nitrofigilis DSM 7299 9172418 YP_003656412.1 CDS Arnit_2254 NC_014166.1 2248095 2248349 R InterPro IPR001450:IPR017896:IPR017900; KEGG: abu:Abu_1824 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EVU1 Ferredoxin; 4Fe-4S ferredoxin complement(2248095..2248349) Arcobacter nitrofigilis DSM 7299 9172419 YP_003656413.1 CDS Arnit_2255 NC_014166.1 2248525 2249898 R COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR006006:IPR009051:IPR000759:IPR013027:IPR 012285; KEGG: abu:Abu_1826 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8EVU3 Glutamate synthase, small chain; TIGRFAM: glutamate synthase, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial; glutamate synthase small subunit complement(2248525..2249898) Arcobacter nitrofigilis DSM 7299 9172420 YP_003656414.1 CDS Arnit_2256 NC_014166.1 2249900 2254336 R COGs: COG0069 Glutamate synthase domain 2; InterProIPR002489:IPR000583:IPR006982:IPR002932:IPR 017932:IPR013785; KEGG: abu:Abu_1827 glutamate synthase, large chain; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: A8EVU4 Glutamate synthase, large chain; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase complement(2249900..2254336) Arcobacter nitrofigilis DSM 7299 9172421 YP_003656415.1 CDS Arnit_2257 NC_014166.1 2254602 2255627 D COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682:IPR018389; KEGG: nam:NAMH_1492 C4-dicarboxylate-binding periplasmic protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: B9L694 C4-dicarboxylate-binding periplasmic protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; TRAP dicarboxylate transporter subunit DctP 2254602..2255627 Arcobacter nitrofigilis DSM 7299 9172422 YP_003656416.1 CDS Arnit_2258 NC_014166.1 2255791 2256846 D COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682:IPR018389; KEGG: nam:NAMH_1492 C4-dicarboxylate-binding periplasmic protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: B9L694 C4-dicarboxylate-binding periplasmic protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; TRAP dicarboxylate transporter subunit DctP 2255791..2256846 Arcobacter nitrofigilis DSM 7299 9172423 YP_003656417.1 CDS Arnit_2259 NC_014166.1 2256858 2257484 D COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: nam:NAMH_1493 small integral C4-dicarboxylate membrane transport protein,putative; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: B9L695 Small integral c4-dicarboxylate membrane transport protein,putative; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ 2256858..2257484 Arcobacter nitrofigilis DSM 7299 9172424 YP_003656418.1 CDS Arnit_2260 NC_014166.1 2257481 2258764 D COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: nam:NAMH_1494 C4-dicarboxylate transport system permease, large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: B9L696 C4-dicarboxylate transport system permease, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 2257481..2258764 Arcobacter nitrofigilis DSM 7299 9172425 YP_003656419.1 CDS Arnit_2261 NC_014166.1 2258837 2260390 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR004358:IPR013163:IPR005467; KEGG: abu:Abu_0362 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERR3 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(2258837..2260390) Arcobacter nitrofigilis DSM 7299 9172426 YP_003656420.1 CDS Arnit_2262 NC_014166.1 2260448 2261131 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR011006:IPR016032:IPR001867:IPR 011991; KEGG: abu:Abu_0363 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ERR4 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 2260448..2261131 Arcobacter nitrofigilis DSM 7299 9172427 YP_003656421.1 CDS Arnit_2263 NC_014166.1 2261120 2261905 R KEGG: abu:Abu_1828 hypothetical protein; SPTR: A8EVU5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF540); hypothetical protein complement(2261120..2261905) Arcobacter nitrofigilis DSM 7299 9172428 YP_003656422.1 CDS Arnit_2264 NC_014166.1 2261915 2262790 R InterPro IPR007197; KEGG: abu:Abu_1829 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: A8EVU6 Putative uncharacterized protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(2261915..2262790) Arcobacter nitrofigilis DSM 7299 9172429 YP_003656423.1 CDS Arnit_2265 NC_014166.1 2262893 2264197 D COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014001:IPR001650:IPR011545:IPR014021:IPR 014014; KEGG: abu:Abu_1116 putative ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ETV2 Putative ATP-dependent RNA helicase RhlE; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase 2262893..2264197 Arcobacter nitrofigilis DSM 7299 9172430 YP_003656424.1 CDS Arnit_2266 NC_014166.1 2264201 2264530 D KEGG: hypothetical protein; SPTR: B1HQH6 Chromosome partition protein smc; hypothetical protein 2264201..2264530 Arcobacter nitrofigilis DSM 7299 9172431 YP_003656425.1 CDS Arnit_2267 NC_014166.1 2264538 2265059 R COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055:IPR012337:IPR013520; KEGG: abu:Abu_1113 hypothetical protein; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: A8ETU9 Putative uncharacterized protein; PFAM: Exonuclease; exonuclease RNase T and DNA polymerase III complement(2264538..2265059) Arcobacter nitrofigilis DSM 7299 9172432 YP_003656426.1 CDS Arnit_2268 NC_014166.1 2265056 2266981 R COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000160:IPR001633; KEGG: pmx:PERMA_0575 signal transduction response regulator; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; EAL domain protein; SPTR: C0QUK0 Signal transduction response regulator; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(2265056..2266981) Arcobacter nitrofigilis DSM 7299 9172433 YP_003656427.1 CDS Arnit_2269 NC_014166.1 2266971 2267438 R KEGG: pmx:PERMA_0577 hypothetical protein; SPTR: C1ZXR0 Putative uncharacterized protein; hypothetical protein complement(2266971..2267438) Arcobacter nitrofigilis DSM 7299 9172434 YP_003656428.1 CDS Arnit_2270 NC_014166.1 2267438 2269333 R InterPro IPR012910:IPR000531; KEGG: sul:SYO3AOP1_1604 hypothetical protein; PFAM: TonB-dependent receptor plug; SPTR: C1ZXQ9 TonB-dependent receptor family protein; PFAM: TonB-dependent Receptor Plug Domain; TonB-dependent receptor plug complement(2267438..2269333) Arcobacter nitrofigilis DSM 7299 9172435 YP_003656429.1 CDS Arnit_2271 NC_014166.1 2269518 2270081 D COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: abu:Abu_0577 peptidase, ThiJ/PfpI family protein; PFAM: ThiJ/PfpI domain protein; SPTR: A8ESC0 Peptidase, ThiJ/PfpI family protein; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; PfpI family intracellular protease 2269518..2270081 Arcobacter nitrofigilis DSM 7299 9172436 YP_003656430.1 CDS Arnit_2272 NC_014166.1 2270147 2270878 D COGs: COG1414 Transcriptional regulator; InterPro IPR000835:IPR014757; KEGG: mta:Moth_0417 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein MarR; SPTR: Q2RLE1 Transcriptional regulator, IclR family; PFAM: MarR family; Bacterial transcriptional regulator; IclR family transcriptional regulator 2270147..2270878 Arcobacter nitrofigilis DSM 7299 9172437 YP_003656431.1 CDS Arnit_2273 NC_014166.1 2271475 2271702 R SPTR: A9QGZ0 Elongation factor 1-alpha (Fragment); hypothetical protein complement(2271475..2271702) Arcobacter nitrofigilis DSM 7299 9172438 YP_003656432.1 CDS Arnit_2274 NC_014166.1 2271859 2272269 D COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR015797:IPR020476:IPR000086; KEGG: abu:Abu_0795 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; SPTR: A8ESY6 MutT/nudix family protein; PFAM: NUDIX domain; NUDIX hydrolase 2271859..2272269 Arcobacter nitrofigilis DSM 7299 9172439 YP_003656433.1 CDS Arnit_2275 NC_014166.1 2272309 2273241 D COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: ppr:PBPRA1007 putative cation efflux family protein; PFAM: cation efflux protein; SPTR: Q6LTF8 Putative cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2272309..2273241 Arcobacter nitrofigilis DSM 7299 9172440 YP_003656434.1 CDS Arnit_2276 NC_014166.1 2273391 2274356 D COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: tye:THEYE_A1534 HD domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B6BKA7 HD-GYP domain; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 2273391..2274356 Arcobacter nitrofigilis DSM 7299 9172441 YP_003656435.1 CDS Arnit_2277 NC_014166.1 2274376 2274711 R KEGG: dal:Dalk_5188 leucine rich repeat variant; SPTR: B8FE77 Leucine rich repeat variant; hypothetical protein complement(2274376..2274711) Arcobacter nitrofigilis DSM 7299 9172442 YP_003656436.1 CDS Arnit_2278 NC_014166.1 2274832 2276082 R COGs: COG2233 Xanthine/uracil permease; InterPro IPR006042:IPR006043; KEGG: wsu:WS0203 uracil permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: C2A016 Uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Permease family; TIGRFAM: uracil-xanthine permease; uracil-xanthine permease complement(2274832..2276082) Arcobacter nitrofigilis DSM 7299 9172443 YP_003656437.1 CDS Arnit_2279 NC_014166.1 2276216 2276839 D COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR005765:IPR000836; KEGG: pmx:PERMA_1366 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: B6BGG7 Uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 2276216..2276839 Arcobacter nitrofigilis DSM 7299 9172444 YP_003656438.1 CDS Arnit_2280 NC_014166.1 2276881 2277741 D COGs: COG2354 conserved hypothetical protein; InterPro IPR008526; KEGG: tdn:Suden_1370 hypothetical protein; PFAM: protein of unknown function DUF808; SPTR: Q30QT4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF808); hypothetical protein 2276881..2277741 Arcobacter nitrofigilis DSM 7299 9172445 YP_003656439.1 CDS Arnit_2281 NC_014166.1 2277765 2279315 R COGs: COG2814 Arabinose efflux permease; InterPro IPR004638:IPR016196:IPR001411:IPR011701; KEGG: rso:RSc1852 multidrug resistance transmembrane protein; PFAM: major facilitator superfamily MFS_1; SPTR: Q8XYB0 Probable multidrug resistance transmembrane protein; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein; EmrB/QacA subfamily drug resistance transporter complement(2277765..2279315) Arcobacter nitrofigilis DSM 7299 9172446 YP_003656440.1 CDS Arnit_2282 NC_014166.1 2279330 2280463 R COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR003997:IPR006143; KEGG: vcj:VCD_002936 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: A2P4R2 Multidrug resistance protein VceA; PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A); secretion protein HlyD family protein complement(2279330..2280463) Arcobacter nitrofigilis DSM 7299 9172447 YP_003656441.1 CDS Arnit_2283 NC_014166.1 2280453 2281940 R COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: rso:RSc1854 putative outer membrane multidrug resistance lipoprotein; PFAM: outer membrane efflux protein; SPTR: Q8XYA8 Putative outer membrane multidrug resistance lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein complement(2280453..2281940) Arcobacter nitrofigilis DSM 7299 9172448 YP_003656442.1 CDS Arnit_2284 NC_014166.1 2282048 2282656 D COGs: COG1309 Transcriptional regulator; InterPro IPR009057:IPR001647:IPR012287; KEGG: ctt:CtCNB1_0912 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: B5SCI4 Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 2282048..2282656 Arcobacter nitrofigilis DSM 7299 9172449 YP_003656443.1 CDS Arnit_2285 NC_014166.1 2282678 2283415 R InterPro IPR006620; KEGG: cps:CPS_1322 2OG-Fe(II) oxygenase family oxidoreductase; SMART: Prolyl 4-hydroxylase alpha subunit; SPTR: A6EZR8 Oxidoreductase, 2OG-Fe(II) oxygenase family protein; prolyl 4-hydroxylase subunit alpha complement(2282678..2283415) Arcobacter nitrofigilis DSM 7299 9172450 YP_003656444.1 CDS Arnit_2286 NC_014166.1 2284362 2285048 R COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterProIPR014732:IPR011060:IPR001754:IPR013785:IPR 018089; KEGG: abu:Abu_1848 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: A8EVW5 Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; orotidine 5'-phosphate decarboxylase complement(2284362..2285048) Arcobacter nitrofigilis DSM 7299 9172455 YP_003656445.1 CDS Arnit_2287 NC_014166.1 2285048 2285446 R COGs: COG0781 Transcription termination factor; InterPro IPR011605:IPR006027; KEGG: abu:Abu_1847 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44; SPTR: A8EVW4 N utilization substance protein B homolog; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; NusB antitermination factor complement(2285048..2285446) Arcobacter nitrofigilis DSM 7299 9172456 YP_003656446.1 CDS Arnit_2288 NC_014166.1 2285448 2285918 R COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: abu:Abu_1846 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; PRIAM: Riboflavin synthase; SPTR: A8EVW3 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(2285448..2285918) Arcobacter nitrofigilis DSM 7299 9172457 YP_003656447.1 CDS Arnit_2289 NC_014166.1 2285950 2286750 R COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006269:IPR006218:IPR013785; KEGG: abu:Abu_1845 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: A8EVW2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2285950..2286750) Arcobacter nitrofigilis DSM 7299 9172458 YP_003656448.1 CDS Arnit_2290 NC_014166.1 2286747 2288438 R COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037; KEGG: nis:NIS_1717 potassium uptake protein; PFAM: TrkA-N domain protein; SPTR: C1ZYR5 K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-N domain-containing protein complement(2286747..2288438) Arcobacter nitrofigilis DSM 7299 9172459 YP_003656449.1 CDS Arnit_2291 NC_014166.1 2288465 2288851 R KEGG: sun:SUN_1597 hypothetical protein; SPTR: C1ZYR4 Putative uncharacterized protein; hypothetical protein complement(2288465..2288851) Arcobacter nitrofigilis DSM 7299 9172460 YP_003656450.1 CDS Arnit_2292 NC_014166.1 2288829 2290571 R COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932:IPR013785; KEGG: sun:SUN_1986 hypothetical protein; PFAM: ferredoxin-dependent glutamate synthase; SPTR: A6QBS0 Putative uncharacterized protein; PFAM: Conserved region in glutamate synthase; ferredoxin-dependent glutamate synthase complement(2288829..2290571) Arcobacter nitrofigilis DSM 7299 9172461 YP_003656451.1 CDS Arnit_2293 NC_014166.1 2290581 2291462 R InterPro IPR000620; KEGG: abu:Abu_1844 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8EVW1 Conserved hypothetical membrane protein (DUF6); PFAM: EamA-like transporter family; hypothetical protein complement(2290581..2291462) Arcobacter nitrofigilis DSM 7299 9172462 YP_003656452.1 CDS Arnit_2294 NC_014166.1 2291585 2292850 D COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR005750:IPR013792:IPR001986; KEGG: abu:Abu_1843 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: A8EVW0 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine1- carboxyvinyltransferase 2291585..2292850 Arcobacter nitrofigilis DSM 7299 9172463 YP_003656453.1 CDS Arnit_2295 NC_014166.1 2292929 2294050 D KEGG: cju:C8J_1365 hypothetical protein; SPTR: A8FNC6 Putative uncharacterized protein; hypothetical protein 2292929..2294050 Arcobacter nitrofigilis DSM 7299 9172464 YP_003656454.1 CDS Arnit_2296 NC_014166.1 2294061 2294675 D InterPro IPR003615; KEGG: abu:Abu_1842 hypothetical protein; SMART: HNH nuclease; SPTR: A8EVV9 Putative uncharacterized protein; HNH nuclease 2294061..2294675 Arcobacter nitrofigilis DSM 7299 9172465 YP_003656455.1 CDS Arnit_2297 NC_014166.1 2294676 2295548 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR011256:IPR009057:IPR020449:IPR 000005:IPR010499:IPR012287:IPR018062; KEGG: abu:Abu_0178 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8ER81 Transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(2294676..2295548) Arcobacter nitrofigilis DSM 7299 9172466 YP_003656456.1 CDS Arnit_2298 NC_014166.1 2295671 2296354 D KEGG: abu:Abu_1727 hypothetical protein; SPTR: A8EVK1 Putative uncharacterized protein; hypothetical protein 2295671..2296354 Arcobacter nitrofigilis DSM 7299 9172467 YP_003656457.1 CDS Arnit_2299 NC_014166.1 2296357 2297763 R COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR001775:IPR001814:IPR004846; KEGG: abu:Abu_1833 general secretion pathway protein D; PFAM: type II and III secretion system protein; SPTR: A8EVV0 General secretion pathway protein D; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; type II and III secretion system protein complement(2296357..2297763) Arcobacter nitrofigilis DSM 7299 9172468 YP_003656458.1 CDS Arnit_2300 NC_014166.1 2297826 2298407 R COGs: COG1739 conserved hypothetical protein; InterPro IPR020568:IPR001498; KEGG: abu:Abu_1834 hypothetical protein; PFAM: protein of unknown function UPF0029; SPTR: A8EVV1 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: conserved hypothetical protein TIGR00257; hypothetical protein complement(2297826..2298407) Arcobacter nitrofigilis DSM 7299 9172469 YP_003656459.1 CDS Arnit_2301 NC_014166.1 2298422 2299144 D COGs: COG1189 rRNA methylase; InterPro IPR002942:IPR004538:IPR013216; KEGG: abu:Abu_1835 hemolysin A; PFAM: RNA-binding S4 domain protein; Methyltransferase type 11; SMART: RNA-binding S4 domain protein; SPTR: A8EVV2 Hemolysin A; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein; hemolysin A 2298422..2299144 Arcobacter nitrofigilis DSM 7299 9172470 YP_003656460.1 CDS Arnit_2302 NC_014166.1 2299141 2299968 D COGs: COG0196 FAD synthase; InterPro IPR002606:IPR015865:IPR015864:IPR014729; KEGG: abu:Abu_1836 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: Riboflavin kinase; FAD synthetase; SPTR: A8EVV3 Bifunctional riboflavin kinase/FAD synthase RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; riboflavin biosynthesis protein RibF 2299141..2299968 Arcobacter nitrofigilis DSM 7299 9172471 YP_003656461.1 CDS Arnit_2303 NC_014166.1 2300005 2300715 D InterPro IPR005271:IPR013216; KEGG: abu:Abu_1837 methyltransferase, putative; PFAM: Methyltransferase type 11; SPTR: A8EVV4 tRNA (cmo5U34)-methyltransferase; TIGRFAM: methyltransferase; PFAM: Methyltransferase domain; TIGRFAM: methyltransferase, putative; methyltransferase 2300005..2300715 Arcobacter nitrofigilis DSM 7299 9172472 YP_003656462.1 CDS Arnit_2304 NC_014166.1 2300727 2301233 D COGs: COG1225 Peroxiredoxin; InterPro IPR012336:IPR000866:IPR017936:IPR012335; KEGG: abu:Abu_1838 bacterioferritin comigratory protein, alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8EVV5 Bacterioferritin comigratory protein, alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 2300727..2301233 Arcobacter nitrofigilis DSM 7299 9172473 YP_003656463.1 CDS Arnit_2305 NC_014166.1 2301242 2302318 D KEGG: abu:Abu_1839 hypothetical protein; SPTR: A8EVV6 Putative uncharacterized protein; hypothetical protein 2301242..2302318 Arcobacter nitrofigilis DSM 7299 9172474 YP_003656464.1 CDS Arnit_2306 NC_014166.1 2302305 2303693 D COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR006094:IPR004113:IPR 016167:IPR016168; KEGG: abu:Abu_1840 glycolate oxidase; PFAM: FAD linked oxidase domain protein; SPTR: A8EVV7 Glycolate oxidase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; FAD linked oxidase domain-containing protein 2302305..2303693 Arcobacter nitrofigilis DSM 7299 9172475 YP_003656465.1 CDS Arnit_2307 NC_014166.1 2303703 2304494 D COGs: COG1295 membrane protein; InterPro IPR017039:IPR004664; KEGG: abu:Abu_1841 tRNA-processing ribonuclease BN; PFAM: ribonuclease BN; SPTR: A8EVV8 tRNA-processing ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease BN 2303703..2304494 Arcobacter nitrofigilis DSM 7299 9172476 YP_003656466.1 CDS Arnit_2308 NC_014166.1 2304584 2304979 D KEGG: dsa:Desal_0535 putative lipoprotein; SPTR: C6BXP4 Putative lipoprotein; putative lipoprotein 2304584..2304979 Arcobacter nitrofigilis DSM 7299 9172477 YP_003656467.1 CDS Arnit_2309 NC_014166.1 2305111 2306058 D KEGG: rfr:Rfer_3975 hypothetical protein; SPTR: C2A0F0 Putative uncharacterized protein; hypothetical protein 2305111..2306058 Arcobacter nitrofigilis DSM 7299 9172478 YP_003656468.1 CDS Arnit_2310 NC_014166.1 2306059 2307204 D COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR016039:IPR013747:IPR016038; KEGG: pay:PAU_02401 hypothetical protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; SPTR: C2A0F1 3-oxoacyl-(Acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain-containing protein 2306059..2307204 Arcobacter nitrofigilis DSM 7299 9172479 YP_003656469.1 CDS Arnit_2311 NC_014166.1 2307204 2307611 D KEGG: aap:NT05HA_1738 hypothetical protein; SPTR: C2A0F2 Putative uncharacterized protein; hypothetical protein 2307204..2307611 Arcobacter nitrofigilis DSM 7299 9172480 YP_003656470.1 CDS Arnit_2312 NC_014166.1 2307595 2308587 D KEGG: aap:NT05HA_1739 hypothetical protein; SPTR: C2A0F3 Putative uncharacterized protein; hypothetical protein 2307595..2308587 Arcobacter nitrofigilis DSM 7299 9172481 YP_003656471.1 CDS Arnit_2313 NC_014166.1 2308584 2309423 R KEGG: hba:Hbal_2899 hypothetical protein; SPTR: C2A0F8 Putative uncharacterized protein; hypothetical protein complement(2308584..2309423) Arcobacter nitrofigilis DSM 7299 9172482 YP_003656472.1 CDS Arnit_2314 NC_014166.1 2309424 2310572 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR016039:IPR014030:IPR014031:IPR016038; KEGG: hba:Hbal_2898 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; SPTR: C2A0F9 3-oxoacyl-(Acyl-carrier-protein) synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase complement(2309424..2310572) Arcobacter nitrofigilis DSM 7299 9172483 YP_003656473.1 CDS Arnit_2315 NC_014166.1 2310565 2310819 R InterPro IPR009081; KEGG: dar:Daro_2373 acyl carrier protein; SPTR: Q47DH2 Acyl carrier protein; acyl carrier protein complement(2310565..2310819) Arcobacter nitrofigilis DSM 7299 9172484 YP_003656474.1 CDS Arnit_2316 NC_014166.1 2310816 2311979 R COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR013525:IPR000412; KEGG: hba:Hbal_2896 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: C2A0G1 ABC-2 type transporter; PFAM: ABC-2 type transporter; ABC transporter complement(2310816..2311979) Arcobacter nitrofigilis DSM 7299 9172485 YP_003656475.1 CDS Arnit_2317 NC_014166.1 2311979 2312839 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cac:CAC2932 ABC-type MDR transporter, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C2A0G2 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; ABC transporter-like protein complement(2311979..2312839) Arcobacter nitrofigilis DSM 7299 9172486 YP_003656476.1 CDS Arnit_2318 NC_014166.1 2312888 2314105 R COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: fph:Fphi_1084 aconitate hydratase; PFAM: AMP-dependent synthetase and ligase; SPTR: C2A0G4 Acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme; AMP-dependent synthetase and ligase complement(2312888..2314105) Arcobacter nitrofigilis DSM 7299 9172487 YP_003656477.1 CDS Arnit_2319 NC_014166.1 2314095 2316218 R COGs: COG4258 exporter; InterPro IPR000731; KEGG: hhe:HH0539 hypothetical protein; SPTR: C2A0G5 Putative uncharacterized protein; exporter complement(2314095..2316218) Arcobacter nitrofigilis DSM 7299 9172488 YP_003656478.1 CDS Arnit_2320 NC_014166.1 2316202 2316681 R KEGG: conserved hypothetical protein; SPTR: C2A0G6 Putative uncharacterized protein; hypothetical protein complement(2316202..2316681) Arcobacter nitrofigilis DSM 7299 9172489 YP_003656479.1 CDS Arnit_2321 NC_014166.1 2316674 2317210 R KEGG: kko:Kkor_2576 hypothetical protein; SPTR: C2A0G7 Putative uncharacterized protein; hypothetical protein complement(2316674..2317210) Arcobacter nitrofigilis DSM 7299 9172490 YP_003656480.1 CDS Arnit_2322 NC_014166.1 2317216 2317920 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002347:IPR002198; KEGG: bpi:BPLAN_576 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: B6BHA9 3-oxoacyl-(Acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2317216..2317920) Arcobacter nitrofigilis DSM 7299 9172491 YP_003656481.1 CDS Arnit_2323 NC_014166.1 2317930 2319450 R COGs: COG2986 Histidine ammonia-lyase; InterPro IPR008948:IPR001106; KEGG: sbm:Shew185_0334 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: C2A0G9 Histidine ammonia-lyase; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; Histidine ammonia-lyase complement(2317930..2319450) Arcobacter nitrofigilis DSM 7299 9172492 YP_003656482.1 CDS Arnit_2324 NC_014166.1 2319447 2320307 R COGs: COG4261 acyltransferase; KEGG: bhy:BHWA1_00288 glycosyl transferase, family 2; lipid A biosynthesis acyltransferase family; SPTR: C2A0H0 Predicted acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; acyltransferase complement(2319447..2320307) Arcobacter nitrofigilis DSM 7299 9172493 YP_003656483.1 CDS Arnit_2325 NC_014166.1 2320308 2321012 R InterPro IPR001173; KEGG: fps:FP2257 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: C2A0H1 Glycosyl transferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(2320308..2321012) Arcobacter nitrofigilis DSM 7299 9172494 YP_003656484.1 CDS Arnit_2326 NC_014166.1 2321002 2321319 R KEGG: fps:FP2259 dehydratase; SPTR: C2A0H2 3-hydroxyacyl-(Acyl-carrier-protein) dehydratase; hypothetical protein complement(2321002..2321319) Arcobacter nitrofigilis DSM 7299 9172495 YP_003656485.1 CDS Arnit_2327 NC_014166.1 2321446 2321697 D InterPro IPR009081; KEGG: bvu:BVU_1019 acyl carrier protein; SPTR: C2A0E5 Putative uncharacterized protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 2321446..2321697 Arcobacter nitrofigilis DSM 7299 9172496 YP_003656486.1 CDS Arnit_2328 NC_014166.1 2321684 2322799 D COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR016039:IPR014030:IPR014031:IPR016038; KEGG: mca:MCA0924 3-oxoacyl-(acyl carrier protein) synthase I; PFAM: Beta-ketoacyl synthase; SPTR: C2A0E6 3-oxoacyl-(Acyl-carrier-protein) synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase 2321684..2322799 Arcobacter nitrofigilis DSM 7299 9172497 YP_003656487.1 CDS Arnit_2329 NC_014166.1 2322796 2323437 D KEGG: fph:Fphi_1089 hypothetical protein; SPTR: C2A0E7 Putative uncharacterized protein; hypothetical protein 2322796..2323437 Arcobacter nitrofigilis DSM 7299 9172498 YP_003656488.1 CDS Arnit_2330 NC_014166.1 2323437 2323787 D KEGG: dps:DP1846 acyl carrier protein dehydratase; SPTR: B6BHC6 Putative uncharacterized protein; hypothetical protein 2323437..2323787 Arcobacter nitrofigilis DSM 7299 9172499 YP_003656489.1 CDS Arnit_2331 NC_014166.1 2323802 2324866 D InterPro IPR013217; KEGG: slo:Shew_2384 O-methyltransferase family protein; PFAM: Methyltransferase type 12; SPTR: B3CGM4 Putative uncharacterized protein; PFAM: O-methyltransferase; type 12 methyltransferase 2323802..2324866 Arcobacter nitrofigilis DSM 7299 9172500 YP_003656490.1 CDS Arnit_2332 NC_014166.1 2330835 2331530 R COGs: COG0775 Nucleoside phosphorylase; InterPro IPR010049:IPR000845; KEGG: abu:Abu_1585 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1; PRIAM: Adenosylhomocysteine nucleosidase; SPTR: A8EV60 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; TIGRFAM: MTA/SAH nucleosidase; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; MTA/SAH nucleosidase complement(2330835..2331530) Arcobacter nitrofigilis DSM 7299 9172507 YP_003656491.1 CDS Arnit_2333 NC_014166.1 2331523 2332452 R COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterProIPR004410:IPR016035:IPR016036:IPR014043:IPR 001227; KEGG: abu:Abu_1586 malonyl coenzyme A-(acyl carrier protein) transacylase; PFAM: Acyl transferase; SPTR: A8EV61 Malonyl coenzyme A-(Acyl carrier protein) transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(2331523..2332452) Arcobacter nitrofigilis DSM 7299 9172508 YP_003656492.1 CDS Arnit_2334 NC_014166.1 2332587 2333162 R COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: abu:Abu_1587 peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: A8EV62 Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase complement(2332587..2333162) Arcobacter nitrofigilis DSM 7299 9172509 YP_003656493.1 CDS Arnit_2335 NC_014166.1 2333176 2334171 R InterPro IPR019734:IPR013105:IPR013026:IPR011990; KEGG: abu:Abu_1588 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: A8EV63 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat; hypothetical protein complement(2333176..2334171) Arcobacter nitrofigilis DSM 7299 9172510 YP_003656494.1 CDS Arnit_2336 NC_014166.1 2334175 2334717 R COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR006664; KEGG: abu:Abu_1589 OmpA/MotB precursor; PFAM: OmpA/MotB domain protein; SPTR: A8EV64 OmpA/MotB; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; OmpA/MotB domain-containing protein complement(2334175..2334717) Arcobacter nitrofigilis DSM 7299 9172511 YP_003656495.1 CDS Arnit_2337 NC_014166.1 2334788 2336056 R COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR007195:IPR011042:IPR000215; KEGG: abu:Abu_1590 translocation protein TolB; PFAM: TolB domain protein; SPTR: A8EV65 Colicin tolerance-like protein (TolB); PFAM: TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB; TolB domain-containing protein complement(2334788..2336056) Arcobacter nitrofigilis DSM 7299 9172512 YP_003656496.1 CDS Arnit_2338 NC_014166.1 2336062 2336802 R KEGG: abu:Abu_1591 hypothetical protein; SPTR: A8EV66 Putative uncharacterized protein; hypothetical protein complement(2336062..2336802) Arcobacter nitrofigilis DSM 7299 9172513 YP_003656497.1 CDS Arnit_2339 NC_014166.1 2336805 2337194 R COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: abu:Abu_1592 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8EV67 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(2336805..2337194) Arcobacter nitrofigilis DSM 7299 9172514 YP_003656498.1 CDS Arnit_2340 NC_014166.1 2337200 2337760 R COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: abu:Abu_1593 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8EV68 Biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(2337200..2337760) Arcobacter nitrofigilis DSM 7299 9172515 YP_003656499.1 CDS Arnit_2341 NC_014166.1 2337767 2338144 R COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR001469:IPR020546; KEGG: abu:Abu_1594 F0F1 ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: A8EV69 ATP synthase epsilon chain; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase F1 subunit epsilon complement(2337767..2338144) Arcobacter nitrofigilis DSM 7299 9172516 YP_003656500.1 CDS Arnit_2342 NC_014166.1 2338162 2339556 R COGs: COG0055 F0F1-type ATP synthase beta subunit; InterProIPR003593:IPR005722:IPR000793:IPR018118:IPR 004100:IPR000194:IPR020003; KEGG: abu:Abu_1595 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SMART: AAA ATPase; SPTR: A8EV70 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase F1 subunit beta complement(2338162..2339556) Arcobacter nitrofigilis DSM 7299 9172517 YP_003656501.1 CDS Arnit_2343 NC_014166.1 2339575 2340459 R COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: abu:Abu_1596 F0F1 ATP synthase subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: A8EV71 ATP synthase gamma chain; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase F1 subunit gamma complement(2339575..2340459) Arcobacter nitrofigilis DSM 7299 9172518 YP_003656502.1 CDS Arnit_2344 NC_014166.1 2340470 2341987 R COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterProIPR005294:IPR000793:IPR018118:IPR004100:IPR 000194:IPR020003; KEGG: abu:Abu_1597 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SPTR: A8EV72 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase F1 subunit alpha complement(2340470..2341987) Arcobacter nitrofigilis DSM 7299 9172519 YP_003656503.1 CDS Arnit_2345 NC_014166.1 2342009 2342539 R COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); InterPro IPR000711; KEGG: abu:Abu_1598 F0F1 ATP synthase subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: A8EV73 ATP synthase subunit delta; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; H+transporting two-sector ATPase delta complement(2342009..2342539) Arcobacter nitrofigilis DSM 7299 9172520 YP_003656504.1 CDS Arnit_2346 NC_014166.1 2342539 2343051 R InterPro IPR002146; KEGG: abu:Abu_1599 ATP synthase F0 sector, subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: A8EV74 ATP synthase subunit b; PFAM: ATP synthase B/B' CF(0); H+transporting two-sector ATPase B/B' complement(2342539..2343051) Arcobacter nitrofigilis DSM 7299 9172521 YP_003656505.1 CDS Arnit_2347 NC_014166.1 2343062 2343484 R InterPro IPR002146; KEGG: abu:Abu_1600 ATP synthase F0 sector, B' subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: A8EV75 ATP synthase F0 sector, B' subunit; PFAM: ATP synthase B/B' CF(0); H+transporting two-sector ATPase B/B' complement(2343062..2343484) Arcobacter nitrofigilis DSM 7299 9172522 YP_003656506.1 CDS Arnit_2348 NC_014166.1 2343588 2344469 R COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: abu:Abu_1601 transcriptional regulator involved in chromosome partitioning ParB; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: A8EV76 Transcriptional regulator involved in chromosome partitioning ParB; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; parB-like partition protein complement(2343588..2344469) Arcobacter nitrofigilis DSM 7299 9172523 YP_003656507.1 CDS Arnit_2349 NC_014166.1 2344473 2345252 R COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR000392:IPR002586; KEGG: abu:Abu_1602 ATPases involved in chromosome partitioning ParA; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A8EV77 ATPases involved in chromosome partitioning ParA; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Cobyrinic acid ac-diamide synthase complement(2344473..2345252) Arcobacter nitrofigilis DSM 7299 9172524 YP_003656508.1 CDS Arnit_2350 NC_014166.1 2345249 2345884 R COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408:IPR004143; KEGG: abu:Abu_1603 biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: A8EV78 Biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--acetyl-CoA-carboxylase ligase complement(2345249..2345884) Arcobacter nitrofigilis DSM 7299 9172525 YP_003656509.1 CDS Arnit_2351 NC_014166.1 2345967 2346860 D COGs: COG0679 permease; InterPro IPR004776; KEGG: abu:Abu_1605 auxin efflux carrier protein; PFAM: Auxin Efflux Carrier; SPTR: A8EV80 Auxin efflux carrier protein; PFAM: Membrane transport protein; auxin efflux carrier 2345967..2346860 Arcobacter nitrofigilis DSM 7299 9172526 YP_003656510.1 CDS Arnit_2352 NC_014166.1 2346845 2348230 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003661:IPR003594:IPR009082:IPR003018:IPR 005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EVB1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; GAF sensor signal transduction histidine kinase complement(2346845..2348230) Arcobacter nitrofigilis DSM 7299 9172527 YP_003656511.1 CDS Arnit_2353 NC_014166.1 2348274 2349194 R COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR011034:IPR005793; KEGG: abu:Abu_1606 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: A8EV81 10-formyltetrahydrofolate:L-methionyl-tRNA(FMet) N-formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(2348274..2349194) Arcobacter nitrofigilis DSM 7299 9172528 YP_003656512.1 CDS Arnit_2354 NC_014166.1 2349204 2349968 R COGs: COG0263 Glutamate 5-kinase; InterProIPR005715:IPR001048:IPR001057:IPR011529:IPR 019797; KEGG: abu:Abu_1607 gamma-glutamyl kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Glutamate 5-kinase; SPTR: A8EV82 Glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase complement(2349204..2349968) Arcobacter nitrofigilis DSM 7299 9172529 YP_003656513.1 CDS Arnit_2355 NC_014166.1 2349969 2351060 R COGs: COG0536 GTPase; InterProIPR014100:IPR006169:IPR006073:IPR002917:IPR 006074; KEGG: abu:Abu_1608 GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; SPTR: A8EV83 GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; GTP-binding protein Obg/CgtA complement(2349969..2351060) Arcobacter nitrofigilis DSM 7299 9172530 YP_003656514.1 CDS Arnit_2356 NC_014166.1 2351197 2351451 R COGs: COG0211 Ribosomal protein L27; InterPro IPR001684:IPR018261; KEGG: nam:NAMH_1402 ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: A6DD71 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 complement(2351197..2351451) Arcobacter nitrofigilis DSM 7299 9172531 YP_003656515.1 CDS Arnit_2357 NC_014166.1 2351463 2351780 R COGs: COG0261 Ribosomal protein L21; InterPro IPR001787:IPR018258; KEGG: abu:Abu_1610 50S ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: A8EV85 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 complement(2351463..2351780) Arcobacter nitrofigilis DSM 7299 9172532 YP_003656516.1 CDS Arnit_2358 NC_014166.1 2351880 2352269 R COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR013813:IPR006175:IPR019897; KEGG: wsu:WS0502 translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: C3XM82 Translation initiation inhibitor; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP complement(2351880..2352269) Arcobacter nitrofigilis DSM 7299 9172533 YP_003656517.1 CDS Arnit_2359 NC_014166.1 2352326 2353963 R COGs: COG0358 DNA primase; InterProIPR002694:IPR006154:IPR006295:IPR013264:IPR 006171; KEGG: abu:Abu_1611 DNA primase; PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; SPTR: A8EV86 DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; DNA primase complement(2352326..2353963) Arcobacter nitrofigilis DSM 7299 9172534 YP_003656518.1 CDS Arnit_2360 NC_014166.1 2354065 2355111 D InterPro IPR019734:IPR013026:IPR011990; KEGG: abu:Abu_1612 hypothetical protein; SPTR: A8EV87 Putative uncharacterized protein; hypothetical protein 2354065..2355111 Arcobacter nitrofigilis DSM 7299 9172535 YP_003656519.1 CDS Arnit_2361 NC_014166.1 2355086 2355532 D COGs: COG0328 Ribonuclease HI; InterPro IPR012337:IPR002156; KEGG: tdn:Suden_2025 ribonuclease H; PFAM: ribonuclease H; SPTR: Q30NY2 RNase HI; PFAM: RNase H; ribonuclease H 2355086..2355532 Arcobacter nitrofigilis DSM 7299 9172536 YP_003656520.1 CDS Arnit_2362 NC_014166.1 2355525 2356196 D COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR000999:IPR001159:IPR011907:IPR014720; KEGG: abu:Abu_1613 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: Ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: A8EV88 Ribonuclease 3; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; ribonuclease III 2355525..2356196 Arcobacter nitrofigilis DSM 7299 9172537 YP_003656521.1 CDS Arnit_2363 NC_014166.1 2356204 2357277 D COGs: COG0082 Chorismate synthase; InterPro IPR000453:IPR020541; KEGG: abu:Abu_1614 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: A8EV89 Chorismate synthase; TIGRFAM: chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase 2356204..2357277 Arcobacter nitrofigilis DSM 7299 9172538 YP_003656522.1 CDS Arnit_2364 NC_014166.1 2357693 2358283 D COGs: COG1342 DNA-binding protein; InterPro IPR002852; KEGG: nth:Nther_2417 protein of unknown function DUF134; PFAM: protein of unknown function DUF134; SPTR: C2A0P4 Predicted DNA-binding protein; PFAM: Protein of unknown function DUF134; hypothetical protein 2357693..2358283 Arcobacter nitrofigilis DSM 7299 9172539 YP_003656523.1 CDS Arnit_2365 NC_014166.1 2358287 2359141 R COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: abu:Abu_1616 M48 family peptidase; PFAM: peptidase M48 Ste24p; SPTR: A8EV91 Probable protease htpX homolog; PFAM: Peptidase family M48; peptidase M48 Ste24p complement(2358287..2359141) Arcobacter nitrofigilis DSM 7299 9172540 YP_003656524.1 CDS Arnit_2366 NC_014166.1 2359280 2359759 D COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: abu:Abu_1618 phosphoglycerate/bisphosphoglycerate mutase, putative; PFAM: Phosphoglycerate mutase; SPTR: A8EV93 Phosphoglycerate/bisphosphoglycerate mutase, putative; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA; putative phosphohistidine phosphatase SixA 2359280..2359759 Arcobacter nitrofigilis DSM 7299 9172541 YP_003656525.1 CDS Arnit_2367 NC_014166.1 2359761 2360999 R COGs: COG2081 flavoprotein; InterPro IPR013027:IPR004792; KEGG: sun:SUN_1167 hypothetical protein; PFAM: HI0933 family protein; SPTR: B6BNB7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275; hypothetical protein complement(2359761..2360999) Arcobacter nitrofigilis DSM 7299 9172542 YP_003656526.1 CDS Arnit_2368 NC_014166.1 2361162 2362505 R COGs: COG0486 GTPase; InterProIPR004520:IPR005225:IPR006073:IPR018948:IPR 002917; KEGG: abu:Abu_1620 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; SPTR: A8EV95 tRNA modification GTPase mnmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; tRNA modification GTPase TrmE complement(2361162..2362505) Arcobacter nitrofigilis DSM 7299 9172543 YP_003656527.1 CDS Arnit_2369 NC_014166.1 2362509 2363369 R KEGG: abu:Abu_1621 hypothetical protein; SPTR: A8EV96 Putative uncharacterized protein; hypothetical protein complement(2362509..2363369) Arcobacter nitrofigilis DSM 7299 9172544 YP_003656528.1 CDS Arnit_2370 NC_014166.1 2363379 2365025 R COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR019998:IPR020001:IPR001708:IPR013308; KEGG: abu:Abu_1622 putative inner membrane protein translocase component YidC; PFAM: 60 kDa inner membrane insertion protein; SPTR: A8EV97 Inner membrane protein, 60 kDa; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; membrane protein insertase complement(2363379..2365025) Arcobacter nitrofigilis DSM 7299 9172545 YP_003656529.1 CDS Arnit_2371 NC_014166.1 2365018 2365350 R COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: abu:Abu_1623 hypothetical protein; PFAM: protein of unknown function DUF37; SPTR: A8EV98 UPF0161 protein Abu_1623; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278; hypothetical protein complement(2365018..2365350) Arcobacter nitrofigilis DSM 7299 9172546 YP_003656530.1 CDS Arnit_2372 NC_014166.1 2365347 2365682 R COGs: COG0594 RNase P protein component; InterPro IPR000100:IPR020568:IPR014721:IPR020539; KEGG: sun:SUN_1572 ribonuclease P protein component; PFAM: ribonuclease P protein; SPTR: A6QAL3 Ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; ribonuclease P protein component complement(2365347..2365682) Arcobacter nitrofigilis DSM 7299 9172547 YP_003656531.1 CDS Arnit_2373 NC_014166.1 2365670 2365804 R InterPro IPR000271; KEGG: abu:Abu_1625 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: C5ZXI7 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 complement(2365670..2365804) Arcobacter nitrofigilis DSM 7299 9172548 YP_003656532.1 CDS Arnit_2374 NC_014166.1 2365899 2368472 R COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR001270:IPR004176:IPR003959:IPR 013093:IPR019489:IPR018368; KEGG: abu:Abu_1626 ATP-dependent Clp protease, ATP-binding subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8EVA0 ATP-dependent Clp protease, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATPase AAA-2 domain-containing protein complement(2365899..2368472) Arcobacter nitrofigilis DSM 7299 9172549 YP_003656533.1 CDS Arnit_2375 NC_014166.1 2368597 2369133 D COGs: COG0164 Ribonuclease HII; InterPro IPR012337:IPR001352; KEGG: abu:Abu_1627 ribonuclease HII; PFAM: ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: A8EVA1 Ribonuclease HII; PFAM: Ribonuclease HII; ribonuclease H 2368597..2369133 Arcobacter nitrofigilis DSM 7299 9172550 YP_003656534.1 CDS Arnit_2376 NC_014166.1 2369173 2369925 D InterPro IPR006620:IPR005123; KEGG: mlo:mlr4439 hypothetical protein; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; SPTR: A6D9X4 Putative uncharacterized protein; PFAM: 2OG-Fe(II) oxygenase superfamily; 2OG-Fe(II) oxygenase 2369173..2369925 Arcobacter nitrofigilis DSM 7299 9172551 YP_003656535.1 CDS Arnit_2377 NC_014166.1 2369922 2370167 R KEGG: mac:MA2224 transposase A; SPTR: Q8TNQ9 Transposase A; hypothetical protein complement(2369922..2370167) Arcobacter nitrofigilis DSM 7299 9172552 YP_003656536.1 CDS Arnit_2378 NC_014166.1 2370164 2370478 R COGs: COG0011 conserved hypothetical protein; InterPro IPR002767:IPR016198; KEGG: abu:Abu_1628 hypothetical protein; PFAM: protein of unknown function DUF77; SPTR: A8EVA2 Putative uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106; hypothetical protein complement(2370164..2370478) Arcobacter nitrofigilis DSM 7299 9172553 YP_003656537.1 CDS Arnit_2379 NC_014166.1 2370488 2371924 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: pin:Ping_1880 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: B6BGG5 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2370488..2371924) Arcobacter nitrofigilis DSM 7299 9172554 YP_003656538.1 CDS Arnit_2380 NC_014166.1 2371946 2374240 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003661:IPR003594:IPR009082:IPR004358:IPR 013163:IPR013655:IPR005467; KEGG: abu:Abu_0102 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ER13 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase complement(2371946..2374240) Arcobacter nitrofigilis DSM 7299 9172555 YP_003656539.1 CDS Arnit_2381 NC_014166.1 2374393 2374734 D KEGG: abu:Abu_1630 hypothetical protein; SPTR: A8EVA4 Putative uncharacterized protein; hypothetical protein 2374393..2374734 Arcobacter nitrofigilis DSM 7299 9172556 YP_003656540.1 CDS Arnit_2382 NC_014166.1 2374731 2375582 R COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569:IPR011057:IPR002579; KEGG: cli:Clim_1371 bifunctional methionine sulfoxide reductase B/A protein; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B; SPTR: Q0YRA3 Peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase complement(2374731..2375582) Arcobacter nitrofigilis DSM 7299 9172557 YP_003656541.1 CDS Arnit_2383 NC_014166.1 2375691 2376305 R COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR011234:IPR002529; KEGG: abu:Abu_1633 fumarylacetoacetate (FAA) hydrolase; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR: A8EVA7 Fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; fumarylacetoacetate (FAA) hydrolase complement(2375691..2376305) Arcobacter nitrofigilis DSM 7299 9172558 YP_003656542.1 CDS Arnit_2384 NC_014166.1 2376441 2376902 R InterPro IPR000835:IPR011991; KEGG: cpy:Cphy_2661 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A9KN11 Transcriptional regulator, MarR family; PFAM: MarR family; MarR family transcriptional regulator complement(2376441..2376902) Arcobacter nitrofigilis DSM 7299 9172559 YP_003656543.1 CDS Arnit_2385 NC_014166.1 2376971 2377516 R COGs: COG0386 Glutathione peroxidase; InterPro IPR012336:IPR000889:IPR012335; KEGG: cpy:Cphy_2662 glutathione peroxidase; PFAM: glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: A9KN12 Glutathione peroxidase; PFAM: Glutathione peroxidase; peroxiredoxin complement(2376971..2377516) Arcobacter nitrofigilis DSM 7299 9172560 YP_003656544.1 CDS Arnit_2386 NC_014166.1 2377753 2378184 R COGs: COG2259 membrane protein; InterPro IPR011637; KEGG: sun:SUN_2352 hypothetical protein; PFAM: DoxX family protein; SPTR: A6QCS9 Putative uncharacterized protein; PFAM: DoxX; DoxX family protein complement(2377753..2378184) Arcobacter nitrofigilis DSM 7299 9172561 YP_003656545.1 CDS Arnit_2387 NC_014166.1 2378292 2378636 D InterPro IPR009710; KEGG: abu:Abu_1634 hypothetical protein; PFAM: protein of unknown function DUF1291; SPTR: A8EVA8 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family; hypothetical protein 2378292..2378636 Arcobacter nitrofigilis DSM 7299 9172562 YP_003656546.1 CDS Arnit_2388 NC_014166.1 2378641 2379297 R InterPro IPR015797:IPR000086; KEGG: abu:Abu_1635 phosphohydrolase (MutT/NUDIX family protein); PFAM: NUDIX hydrolase; SPTR: A8EVA9 Phosphohydrolase (MUTT/NUDIX family protein); PFAM: NUDIX domain; NUDIX hydrolase complement(2378641..2379297) Arcobacter nitrofigilis DSM 7299 9172563 YP_003656547.1 CDS Arnit_2389 NC_014166.1 2379299 2380564 R COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005815:IPR015424:IPR005814:IPR015421; KEGG: abu:Abu_1636 7,8-diaminopelargonic acid synthetase; PFAM: aminotransferase class-III; SPTR: A8EVB0 7,8-diaminopelargonic acid synthetase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(2379299..2380564) Arcobacter nitrofigilis DSM 7299 9172564 YP_003656548.1 CDS Arnit_2390 NC_014166.1 2380611 2383202 R COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterProIPR001638:IPR003594:IPR009082:IPR004358:IPR 015168:IPR005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: NMT1/THI5 like domain protein; extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; SPTR: A8EVB1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Bacterial extracellular solute-binding proteins, family 3; NMT1/THI5 like; histidine kinase complement(2380611..2383202) Arcobacter nitrofigilis DSM 7299 9172565 YP_003656549.1 CDS Arnit_2391 NC_014166.1 2383264 2384520 R InterPro IPR016196:IPR011701:IPR005829; KEGG: wsu:WS1952 transmembrane transport protein-permease; PFAM: major facilitator superfamily MFS_1; SPTR: Q7M811 TRANSMEMBRANE TRANSPORT PROTEIN-PERMEASE; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(2383264..2384520) Arcobacter nitrofigilis DSM 7299 9172566 YP_003656550.1 CDS Arnit_2392 NC_014166.1 2384649 2386841 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: tdn:Suden_0269 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q30TY1 Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(2384649..2386841) Arcobacter nitrofigilis DSM 7299 9172567 YP_003656551.1 CDS Arnit_2393 NC_014166.1 2387129 2388310 D COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: sun:SUN_0073 sulfide-quinone reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B6BHD2 Sulfide-quinone reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2387129..2388310 Arcobacter nitrofigilis DSM 7299 9172568 YP_003656552.1 CDS Arnit_2394 NC_014166.1 2388373 2388891 D KEGG: sun:SUN_2071 hypothetical protein; SPTR: A6QC03 Putative uncharacterized protein; hypothetical protein 2388373..2388891 Arcobacter nitrofigilis DSM 7299 9172569 YP_003656553.1 CDS Arnit_2395 NC_014166.1 2388989 2390986 D COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: abu:Abu_1457 high-affinity choline transport; PFAM: BCCT transporter; SPTR: A8EUT8 High-affinity choline transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; choline/carnitine/betaine transporter 2388989..2390986 Arcobacter nitrofigilis DSM 7299 9172570 YP_003656554.1 CDS Arnit_2396 NC_014166.1 2391036 2391494 R COGs: COG2153 acyltransferase; InterPro IPR016181:IPR000182; KEGG: dat:HRM2_25850 putative acetyltransferase (GNAT family protein); PFAM: GCN5-related N-acetyltransferase; SPTR: A3Y5H8 Probable acetyltransferase YybD; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(2391036..2391494) Arcobacter nitrofigilis DSM 7299 9172571 YP_003656555.1 CDS Arnit_2397 NC_014166.1 2391806 2393146 R COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: swp:swp_3291 gluconate transporter; PFAM: Gluconate transporter; SPTR: C1ZXL1 H+/gluconate symporter family protein; PFAM: GntP family permease; TIGRFAM: gluconate transporter; gluconate transporter complement(2391806..2393146) Arcobacter nitrofigilis DSM 7299 9172572 YP_003656556.1 CDS Arnit_2398 NC_014166.1 2394010 2395038 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057:IPR000005; KEGG: wsu:WS0114 putative transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C2A3A6 DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(2394010..2395038) Arcobacter nitrofigilis DSM 7299 9172573 YP_003656557.1 CDS Arnit_2399 NC_014166.1 2395121 2395540 D COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: hpy:HP1484 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A4VHK7 Membrane protein; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 2395121..2395540 Arcobacter nitrofigilis DSM 7299 9172574 YP_003656558.1 CDS Arnit_2400 NC_014166.1 2395549 2395851 D KEGG: abu:Abu_1417 hypothetical protein; SPTR: A8EUP8 Putative uncharacterized protein; hypothetical protein 2395549..2395851 Arcobacter nitrofigilis DSM 7299 9172575 YP_003656559.1 CDS Arnit_2401 NC_014166.1 2395864 2396229 D InterPro IPR001763; KEGG: deb:DehaBAV1_1201 rhodanese domain-containing protein; SMART: Rhodanese domain protein; SPTR: C0YKU5 Rhodanese-like domain protein; PFAM: Rhodanese-like domain; rhodanese domain-containing protein 2395864..2396229 Arcobacter nitrofigilis DSM 7299 9172576 YP_003656560.1 CDS Arnit_2402 NC_014166.1 2396435 2397967 R COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR013982:IPR002695:IPR011607; KEGG: abu:Abu_1638 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: IMP cyclohydrolase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: A8EVB2 Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(2396435..2397967) Arcobacter nitrofigilis DSM 7299 9172577 YP_003656561.1 CDS Arnit_2403 NC_014166.1 2398126 2399943 D COGs: COG0004 Ammonia permease; InterPro IPR000160:IPR001905:IPR018047; KEGG: tcx:Tcr_2151 ammonium transporter; PFAM: ammonium transporter; GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q1K433 Ammonium transporter; TIGRFAM: ammonium transporter; diguanylate cyclase; PFAM: Ammonium Transporter Family; GGDEF domain; TIGRFAM: ammonium transporter; diguanylate cyclase (GGDEF) domain; ammonium transporter 2398126..2399943 Arcobacter nitrofigilis DSM 7299 9172578 YP_003656562.1 CDS Arnit_2404 NC_014166.1 2400127 2401119 D COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR011095:IPR011761:IPR013816; KEGG: tle:Tlet_0834 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; SPTR: B6BIH9 Putative uncharacterized protein; PFAM: D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 2400127..2401119 Arcobacter nitrofigilis DSM 7299 9172579 YP_003656563.1 CDS Arnit_2405 NC_014166.1 2401126 2401836 R COGs: COG2836 conserved hypothetical protein; KEGG: abu:Abu_1099 hypothetical protein; SPTR: A8ETT5 Putative uncharacterized protein; hypothetical protein complement(2401126..2401836) Arcobacter nitrofigilis DSM 7299 9172580 YP_003656564.1 CDS Arnit_2406 NC_014166.1 2401893 2404103 R COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR010074:IPR010918:IPR016188:IPR000728; KEGG: abu:Abu_1639 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: A8EVB3 Phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase II complement(2401893..2404103) Arcobacter nitrofigilis DSM 7299 9172581 YP_003656565.1 CDS Arnit_2407 NC_014166.1 2404165 2405127 R COGs: COG3034 conserved hypothetical protein; InterPro IPR005490; KEGG: abu:Abu_1640 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: A8EVB4 Putative uncharacterized protein; PFAM: L,D-transpeptidase catalytic domain; ErfK/YbiS/YcfS/YnhG family protein complement(2404165..2405127) Arcobacter nitrofigilis DSM 7299 9172582 YP_003656566.1 CDS Arnit_2408 NC_014166.1 2405204 2406373 D COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR016047; KEGG: abu:Abu_1641 M24/M37 family peptidase; PFAM: Peptidase M23; SPTR: A8EVB5 Peptidase, M23/M37 family; PFAM: Peptidase family M23; peptidase M23 2405204..2406373 Arcobacter nitrofigilis DSM 7299 9172583 YP_003656567.1 CDS Arnit_2409 NC_014166.1 2406376 2407731 D COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006669:IPR006668:IPR000644:IPR006667; KEGG: nis:NIS_0344 magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SPTR: A6Q1U9 Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE); magnesium transporter 2406376..2407731 Arcobacter nitrofigilis DSM 7299 9172584 YP_003656568.1 CDS Arnit_2410 NC_014166.1 2407717 2408040 R KEGG: hypothetical protein; SPTR: Q9N504 Putative uncharacterized protein C33E10.6; hypothetical protein complement(2407717..2408040) Arcobacter nitrofigilis DSM 7299 9172585 YP_003656569.1 CDS Arnit_2411 NC_014166.1 2408047 2408619 R COGs: COG0302 GTP cyclohydrolase I; InterPro IPR001474:IPR020602:IPR018234; KEGG: abu:Abu_1642 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: A8EVB6 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase I complement(2408047..2408619) Arcobacter nitrofigilis DSM 7299 9172586 YP_003656570.1 CDS Arnit_2412 NC_014166.1 2408629 2409825 R COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004:IPR018076; KEGG: abu:Abu_1644 transformation system protein CtsF; PFAM: Type II secretion system F domain; SPTR: A8EVB8 Transformation system protein CtsF; PFAM: Bacterial type II secretion system protein F domain; type II secretion system F domain-containing protein complement(2408629..2409825) Arcobacter nitrofigilis DSM 7299 9172587 YP_003656571.1 CDS Arnit_2413 NC_014166.1 2409822 2411174 R COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593:IPR001482; KEGG: abu:Abu_1645 transformation system protein CtsE; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: A8EVB9 Transformation system protein CtsE; PFAM: Type II/IV secretion system protein; type II secretion system protein E complement(2409822..2411174) Arcobacter nitrofigilis DSM 7299 9172588 YP_003656572.1 CDS Arnit_2414 NC_014166.1 2411158 2411853 R KEGG: hypothetical protein; SPTR: Q4Z6N1 Putative uncharacterized protein (Fragment); hypothetical protein complement(2411158..2411853) Arcobacter nitrofigilis DSM 7299 9172589 YP_003656573.1 CDS Arnit_2415 NC_014166.1 2411825 2412700 R KEGG: abu:Abu_1695 hypothetical protein; SPTR: A8EVG9 Putative uncharacterized protein; hypothetical protein complement(2411825..2412700) Arcobacter nitrofigilis DSM 7299 9172590 YP_003656574.1 CDS Arnit_2416 NC_014166.1 2412785 2413666 R COGs: COG1159 GTPase; InterProIPR005225:IPR005662:IPR009019:IPR002917:IPR 004044:IPR015946; KEGG: abu:Abu_1696 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; SPTR: A8EVH0 GTP-binding protein Era-like protein; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era complement(2412785..2413666) Arcobacter nitrofigilis DSM 7299 9172591 YP_003656575.1 CDS Arnit_2417 NC_014166.1 2413735 2415243 R COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482:IPR020568:IPR000523:IPR002078; KEGG: abu:Abu_1698 Mg chelatase-related protein; PFAM: magnesium chelatase ChlI subunit; SPTR: A8EVH2 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; sigma 54 interacting domain-containing protein complement(2413735..2415243) Arcobacter nitrofigilis DSM 7299 9172592 YP_003656576.1 CDS Arnit_2418 NC_014166.1 2415305 2415817 R COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: abu:Abu_1700 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: A8EVH4 Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase complement(2415305..2415817) Arcobacter nitrofigilis DSM 7299 9172593 YP_003656577.1 CDS Arnit_2419 NC_014166.1 2415826 2416410 R COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215:IPR001907; KEGG: abu:Abu_1701 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: A8EVH5 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit ClpP complement(2415826..2416410) Arcobacter nitrofigilis DSM 7299 9172594 YP_003656578.1 CDS Arnit_2420 NC_014166.1 2416432 2417733 R COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR001179:IPR005215:IPR008881:IPR008880; KEGG: abu:Abu_1702 trigger factor; PFAM: trigger factor domain; peptidylprolyl isomerase FKBP-type; trigger factor domain protein; SPTR: A8EVH6 Trigger factor; TIGRFAM: trigger factor; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; trigger factor complement(2416432..2417733) Arcobacter nitrofigilis DSM 7299 9172595 YP_003656579.1 CDS Arnit_2421 NC_014166.1 2417834 2419612 D InterProIPR019734:IPR002035:IPR013026:IPR011990:IPR 001440; KEGG: tdn:Suden_0657 von Willebrand factor, type A; PFAM: von Willebrand factor type A; TPR repeat-containing protein; SMART: von Willebrand factor type A; Tetratricopeptide repeat; SPTR: Q30SU5 von Willebrand factor, type A; PFAM: Tetratricopeptide repeat; von Willebrand factor type A 2417834..2419612 Arcobacter nitrofigilis DSM 7299 9172596 YP_003656580.1 CDS Arnit_2422 NC_014166.1 2419615 2420739 R COGs: COG2326 conserved hypothetical protein; InterPro IPR016898:IPR005660; KEGG: abu:Abu_1703 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: A8EVH7 Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); hypothetical protein complement(2419615..2420739) Arcobacter nitrofigilis DSM 7299 9172597 YP_003656581.1 CDS Arnit_2423 NC_014166.1 2420743 2421666 R COGs: COG2326 conserved hypothetical protein; InterPro IPR016898:IPR005660; KEGG: abu:Abu_1704 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: A8EVH8 Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); hypothetical protein complement(2420743..2421666) Arcobacter nitrofigilis DSM 7299 9172598 YP_003656582.1 CDS Arnit_2424 NC_014166.1 2421686 2422822 R COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR009006:IPR005730:IPR000183; KEGG: abu:Abu_1705 carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: A8EVH9 Carboxynorspermidine decarboxylase; TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase; carboxynorspermidine decarboxylase complement(2421686..2422822) Arcobacter nitrofigilis DSM 7299 9172599 YP_003656583.1 CDS Arnit_2425 NC_014166.1 2422815 2422979 R COGs: COG1773 Rubredoxin; InterPro IPR004039:IPR018527:IPR001052; KEGG: sun:SUN_1757 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: A6QB45 Rubredoxin; PFAM: Rubredoxin; rubredoxin-type Fe(Cys)4 protein complement(2422815..2422979) Arcobacter nitrofigilis DSM 7299 9172600 YP_003656584.1 CDS Arnit_2426 NC_014166.1 2423090 2424283 R COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR016040:IPR005097; KEGG: abu:Abu_1706 saccharopine dehydrogenase (L-lysine-forming); PFAM: Saccharopine dehydrogenase; SPTR: A8EVI0 Saccharopine dehydrogenase (L-lysine-forming); PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase complement(2423090..2424283) Arcobacter nitrofigilis DSM 7299 9172601 YP_003656585.1 CDS Arnit_2427 NC_014166.1 2424438 2425040 D COGs: COG0625 Glutathione S-transferase; InterProIPR004045:IPR017933:IPR012335:IPR010987:IPR 012336; KEGG: smt:Smal_4025 glutathione S-transferase domain; PFAM: Glutathione S-transferase domain; SPTR: B4SPE2 Glutathione S-transferase domain; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase domain-containing protein 2424438..2425040 Arcobacter nitrofigilis DSM 7299 9172602 YP_003656586.1 CDS Arnit_2428 NC_014166.1 2425110 2427044 R COGs: COG4564 Signal transduction histidine kinase; InterPro IPR004089:IPR010916:IPR013163; KEGG: abu:Abu_1307 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EUE0 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(2425110..2427044) Arcobacter nitrofigilis DSM 7299 9172603 YP_003656587.1 CDS Arnit_2430 NC_014166.1 2429267 2430202 D InterPro IPR002934; KEGG: mex:Mext_4883 DNA polymerase beta subunit; PFAM: DNA polymerase beta domain protein region; SPTR: A9W9L2 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; DNA polymerase beta domain-containing protein 2429267..2430202 Arcobacter nitrofigilis DSM 7299 9172605 YP_003656588.1 CDS Arnit_2431 NC_014166.1 2430203 2430715 D KEGG: eat:EAT1b_2759 phosphoesterase HXTX; SPTR: C4L588 Phosphoesterase HXTX; hypothetical protein 2430203..2430715 Arcobacter nitrofigilis DSM 7299 9172606 YP_003656589.1 CDS Arnit_2432 NC_014166.1 2430736 2431680 R COGs: COG3621 Patatin; InterPro IPR016035:IPR002641; KEGG: shn:Shewana3_4351 patatin; PFAM: Patatin; SPTR: A0L3D3 Patatin; PFAM: Patatin-like phospholipase; patatin complement(2430736..2431680) Arcobacter nitrofigilis DSM 7299 9172607 YP_003656590.1 CDS Arnit_2433 NC_014166.1 2431861 2432133 R KEGG: IBR domain containing protein; SPTR: Q9F554 Relaxosome component; PFAM: Ribbon-helix-helix protein, copG family; hypothetical protein complement(2431861..2432133) Arcobacter nitrofigilis DSM 7299 9172608 YP_003656591.1 CDS Arnit_2434 NC_014166.1 2432394 2432777 D KEGG: nam:NAMH_1184 bacteriophage replication gene A protein (GPA); SPTR: B9LAC0 Bacteriophage replication gene A protein (GPA); hypothetical protein 2432394..2432777 Arcobacter nitrofigilis DSM 7299 9172609 YP_003656592.1 CDS Arnit_2435 NC_014166.1 2432793 2432990 D KEGG: cef:CE0834 hypothetical protein; SPTR: D0DYR5 Holo-(Acyl-carrier-protein) synthase; hypothetical protein 2432793..2432990 Arcobacter nitrofigilis DSM 7299 9172610 YP_003656593.1 CDS Arnit_2436 NC_014166.1 2432992 2433174 D COGs: COG3311 transcriptional regulator protein; InterPro IPR009061:IPR010260; KEGG: asa:ASA_3675 hypothetical protein; PFAM: Prophage CP4-57 regulatory; SPTR: A4SRW4 Putative uncharacterized protein; PFAM: Prophage CP4-57 regulatory protein (AlpA); phage transcriptional regulator AlpA 2432992..2433174 Arcobacter nitrofigilis DSM 7299 9172611 YP_003656594.1 CDS Arnit_2437 NC_014166.1 2433191 2434480 R COGs: COG3550 conserved hypothetical protein; InterPro IPR017508:IPR012894:IPR012893; KEGG: sun:SUN_1606 hypothetical protein; PFAM: HipA domain protein; SPTR: A6QAP7 Putative uncharacterized protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain; HipA N-terminal domain-containing protein complement(2433191..2434480) Arcobacter nitrofigilis DSM 7299 9172612 YP_003656595.1 CDS Arnit_2438 NC_014166.1 2434484 2434726 R InterPro IPR001387:IPR010982; KEGG: sun:SUN_1605 Cro/CI family transcriptional regulator-related protein; SPTR: A6QAP6 Transcriptional regulator, Cro/CI/xre family; PFAM: Helix-turn-helix; XRE family transcriptional regulator complement(2434484..2434726) Arcobacter nitrofigilis DSM 7299 9172613 YP_003656596.1 CDS Arnit_2439 NC_014166.1 2435182 2437095 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR015168:IPR013656; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: NMT1/THI5 like domain protein; PAS fold-4 domain protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; PAS domain containing protein; SPTR: B6BNR7 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; PAS fold; NMT1/THI5 like; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS/PAC sensor-containg diguanylate cyclase complement(2435182..2437095) Arcobacter nitrofigilis DSM 7299 9172614 YP_003656597.1 CDS Arnit_2440 NC_014166.1 2437167 2438609 R COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021:IPR001650:IPR014014:IPR000629:IPR 011545:IPR014001; KEGG: abu:Abu_1479 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B6BHW1 Putative helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(2437167..2438609) Arcobacter nitrofigilis DSM 7299 9172615 YP_003656598.1 CDS Arnit_2441 NC_014166.1 2438733 2440451 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR000014:IPR000700:IPR003594:IPR 013655:IPR001610:IPR004358; KEGG: cff:CFF8240_0376 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; SPTR: A0RMZ5 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase complement(2438733..2440451) Arcobacter nitrofigilis DSM 7299 9172616 YP_003656599.1 CDS Arnit_2442 NC_014166.1 2440452 2440826 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: abu:Abu_0418 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ERW9 Two-component response regulator; PFAM: Response regulator receiver domain; response regulator receiver protein complement(2440452..2440826) Arcobacter nitrofigilis DSM 7299 9172617 YP_003656600.1 CDS Arnit_2443 NC_014166.1 2440830 2442242 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004090; KEGG: abu:Abu_0417 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ERW8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(2440830..2442242) Arcobacter nitrofigilis DSM 7299 9172618 YP_003656601.1 CDS Arnit_2444 NC_014166.1 2442439 2442735 D KEGG: cma:Cmaq_0189 hypothetical protein; SPTR: A8MAA6 Putative uncharacterized protein; hypothetical protein 2442439..2442735 Arcobacter nitrofigilis DSM 7299 9172619 YP_003656602.1 CDS Arnit_2445 NC_014166.1 2442736 2442951 D KEGG: hypothetical protein; SPTR: C4G4T7 Putative uncharacterized protein; hypothetical protein 2442736..2442951 Arcobacter nitrofigilis DSM 7299 9172620 YP_003656603.1 CDS Arnit_2446 NC_014166.1 2443076 2443417 D COGs: COG4378 conserved hypothetical protein; InterPro IPR016772; KEGG: abu:Abu_1767 hypothetical protein; PFAM: Uncharacterised conserved protein UCP020408; SPTR: A8EVP0 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2325); hypothetical protein 2443076..2443417 Arcobacter nitrofigilis DSM 7299 9172621 YP_003656604.1 CDS Arnit_2447 NC_014166.1 2443503 2443949 R COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: abu:Abu_1770 ferric uptake regulation protein; PFAM: ferric-uptake regulator; SPTR: A8EVP3 Ferric uptake regulation protein; PFAM: Ferric uptake regulator family; Fur family ferric uptake regulator complement(2443503..2443949) Arcobacter nitrofigilis DSM 7299 9172622 YP_003656605.1 CDS Arnit_2448 NC_014166.1 2444135 2444371 D COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: nam:NAMH_0401 hypothetical protein; PFAM: FeoA family protein; SPTR: B9L866 Conserved domain protein; PFAM: FeoA domain; FeoA family protein 2444135..2444371 Arcobacter nitrofigilis DSM 7299 9172623 YP_003656606.1 CDS Arnit_2449 NC_014166.1 2444359 2446479 D COGs: COG0370 Fe2+ transport system protein B; InterProIPR000629:IPR005225:IPR003373:IPR002917:IPR 011619:IPR011642:IPR011640; KEGG: abu:Abu_0551 ferrous iron transport protein B; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; SPTR: A8ES94 Ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transport protein B 2444359..2446479 Arcobacter nitrofigilis DSM 7299 9172624 YP_003656607.1 CDS Arnit_2450 NC_014166.1 2446488 2446826 R KEGG: abu:Abu_1771 hypothetical protein; SPTR: A8EVP4 Putative uncharacterized protein; hypothetical protein complement(2446488..2446826) Arcobacter nitrofigilis DSM 7299 9172625 YP_003656608.1 CDS Arnit_2451 NC_014166.1 2446863 2447600 R COGs: COG2935 Putative arginyl-tRNA:protein arginylyltransferase; InterPro IPR017138:IPR007471:IPR007472; KEGG: abu:Abu_1772 arginyl-tRNA-protein transferase; PFAM: Arginine-tRNA-protein transferase domain protein; PRIAM: Arginyltransferase; SPTR: A8EVP5 Putative arginyl-tRNA--protein transferase; PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus; arginyltransferase complement(2446863..2447600) Arcobacter nitrofigilis DSM 7299 9172626 YP_003656609.1 CDS Arnit_2452 NC_014166.1 2447603 2448343 R COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR013785:IPR011060:IPR018204:IPR002028; KEGG: abu:Abu_1773 tryptophan synthase, alpha chain; PFAM: tryptophan synthase alpha chain; SPTR: A8EVP6 Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha complement(2447603..2448343) Arcobacter nitrofigilis DSM 7299 9172627 YP_003656610.1 CDS Arnit_2453 NC_014166.1 2448486 2448845 R InterPro IPR011462; KEGG: tdn:Suden_1725 hypothetical protein; PFAM: protein of unknown function DUF1568; SPTR: Q30PT2 Putative uncharacterized protein; PFAM: Transposase IS200 like; hypothetical protein complement(2448486..2448845) Arcobacter nitrofigilis DSM 7299 9172628 YP_003656611.1 CDS Arnit_2454 NC_014166.1 2448991 2449185 R KEGG: hypothetical protein; SPTR: Q0Q0I3 TatC; hypothetical protein complement(2448991..2449185) Arcobacter nitrofigilis DSM 7299 9172629 YP_003656612.1 CDS Arnit_2455 NC_014166.1 2449178 2449654 R KEGG: mac:MA3805 hypothetical protein; SPTR: Q8TJH9 Putative uncharacterized protein; hypothetical protein complement(2449178..2449654) Arcobacter nitrofigilis DSM 7299 9172630 YP_003656613.1 CDS Arnit_2456 NC_014166.1 2449892 2450701 D COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700:IPR015813; KEGG: abu:Abu_1775 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: A8EVP8 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2449892..2450701 Arcobacter nitrofigilis DSM 7299 9172631 YP_003656614.1 CDS Arnit_2457 NC_014166.1 2450704 2451720 D COGs: COG2255 Holliday junction resolvasome helicase subunit; InterProIPR008823:IPR011991:IPR004605:IPR008824:IPR 003959:IPR003593; KEGG: abu:Abu_1776 Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; SPTR: A8EVP9 Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase RuvB 2450704..2451720 Arcobacter nitrofigilis DSM 7299 9172632 YP_003656615.1 CDS Arnit_2458 NC_014166.1 2451717 2452784 D COGs: COG0628 permease; InterPro IPR002549; KEGG: abu:Abu_1777 acid membrane antigen A; PFAM: protein of unknown function UPF0118; SPTR: A8EVQ0 Acid membrane antigen A; PFAM: Domain of unknown function DUF20; hypothetical protein 2451717..2452784 Arcobacter nitrofigilis DSM 7299 9172633 YP_003656616.1 CDS Arnit_2459 NC_014166.1 2452781 2453878 R COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR001611:IPR003591; KEGG: lil:LA3321 leucine-rich repeat-containing protein; PFAM: leucine-rich repeat protein; SPTR: Q8F118 Leucine-rich repeat containing protein; PFAM: Leucine Rich Repeat; hypothetical protein complement(2452781..2453878) Arcobacter nitrofigilis DSM 7299 9172634 YP_003656617.1 CDS Arnit_2460 NC_014166.1 2453890 2454828 R InterPro IPR001623; KEGG: sea:SeAg_B0612 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: C5S2U1 Putative uncharacterized protein; PFAM: DnaJ domain; heat shock protein DnaJ domain-containing protein complement(2453890..2454828) Arcobacter nitrofigilis DSM 7299 9172635 YP_003656618.1 CDS Arnit_2461 NC_014166.1 2455062 2455802 R COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763:IPR004209; KEGG: abu:Abu_1778 hypothetical protein; SMART: Rhodanese domain protein; SPTR: A8EVQ1 Putative uncharacterized protein; PFAM: Ferredoxin thioredoxin reductase catalytic beta chain; Rhodanese-like domain; rhodanese domain-containing protein complement(2455062..2455802) Arcobacter nitrofigilis DSM 7299 9172636 YP_003656619.1 CDS Arnit_2462 NC_014166.1 2455802 2456419 R InterPro IPR009056; KEGG: abu:Abu_1919 cytochrome c; SPTR: A8EW18 Cytochrome c; PFAM: Cytochrome c; cytochrome c complement(2455802..2456419) Arcobacter nitrofigilis DSM 7299 9172637 YP_003656620.1 CDS Arnit_2463 NC_014166.1 2456433 2458664 R COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR018368:IPR001270:IPR013461:IPR004176:IPR 003959:IPR013093:IPR019489:IPR003593; KEGG: abu:Abu_1920 ATP-dependent Clp protease, ATP-binding subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8EW19 ATP-dependent Clp protease, ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; ATP-dependent Clp protease ATP-binding subunit ClpA complement(2456433..2458664) Arcobacter nitrofigilis DSM 7299 9172638 YP_003656621.1 CDS Arnit_2464 NC_014166.1 2458668 2458967 R COGs: COG2127 conserved hypothetical protein; InterPro IPR014719:IPR003769; KEGG: abu:Abu_1921 ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS; SPTR: A8EW20 ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(2458668..2458967) Arcobacter nitrofigilis DSM 7299 9172639 YP_003656622.1 CDS Arnit_2465 NC_014166.1 2459023 2459658 D COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: abu:Abu_1922 dethiobiotin synthetase; PRIAM: Dethiobiotin synthase; SPTR: A8EW21 Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase 2459023..2459658 Arcobacter nitrofigilis DSM 7299 9172640 YP_003656623.1 CDS Arnit_2466 NC_014166.1 2459677 2461053 R COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR018042:IPR001341; KEGG: mcl:MCCL_0984 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Aspartate kinase; SPTR: A6C2D9 Aspartokinase; TIGRFAM: aspartate kinase; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; aspartate kinase complement(2459677..2461053) Arcobacter nitrofigilis DSM 7299 9172641 YP_003656624.1 CDS Arnit_2467 NC_014166.1 2461174 2461569 R InterPro IPR010462:IPR011051; KEGG: hna:Hneap_0196 ectoine synthase; PFAM: Ectoine synthase; PRIAM: Ectoine synthase; SPTR: C0H1E8 Ectoine synthase; PFAM: Ectoine synthase; ectoine synthase complement(2461174..2461569) Arcobacter nitrofigilis DSM 7299 9172642 YP_003656625.1 CDS Arnit_2468 NC_014166.1 2461574 2462854 R COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterProIPR015421:IPR015424:IPR005814:IPR004637:IPR 012773; KEGG: dol:Dole_0961 diaminobutyrate--2-oxoglutarate aminotransferase; PFAM: aminotransferase class-III; SPTR: A8ZWG3 Diaminobutyrate--2-oxoglutarate aminotransferase; TIGRFAM: diaminobutyrate/2-oxoglutarate aminotransferase; 2,4-diaminobutyrate 4-transaminase; PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; diaminobutyrate/2-oxoglutarate aminotransferase complement(2461574..2462854) Arcobacter nitrofigilis DSM 7299 9172643 YP_003656626.1 CDS Arnit_2469 NC_014166.1 2462854 2463354 R InterPro IPR000182:IPR016181:IPR012772; KEGG: hch:HCH_01510 histone acetyltransferase HPA2-like acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: Diaminobutyrate acetyltransferase; SPTR: B6BTZ3 L-2,4-diaminobutyric acid acetyltransferase; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; L-2,4-diaminobutyric acid acetyltransferase complement(2462854..2463354) Arcobacter nitrofigilis DSM 7299 9172644 YP_003656627.1 CDS Arnit_2470 NC_014166.1 2463535 2463873 D KEGG: wsu:WS0858 hypothetical protein; SPTR: B6BHG8 Putative uncharacterized protein; hypothetical protein 2463535..2463873 Arcobacter nitrofigilis DSM 7299 9172645 YP_003656628.1 CDS Arnit_2471 NC_014166.1 2463868 2465052 R InterPro IPR016196:IPR018181:IPR011701; KEGG: abu:Abu_1937 putative integral membrane protein; PFAM: major facilitator superfamily MFS_1; SPTR: A8EW36 Putative integral membrane protein; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(2463868..2465052) Arcobacter nitrofigilis DSM 7299 9172646 YP_003656629.1 CDS Arnit_2472 NC_014166.1 2465064 2465774 R KEGG: nis:NIS_1069 hypothetical protein; SPTR: A6Q3X0 Putative uncharacterized protein; hypothetical protein complement(2465064..2465774) Arcobacter nitrofigilis DSM 7299 9172647 YP_003656630.1 CDS Arnit_2473 NC_014166.1 2465785 2467260 R KEGG: nam:NAMH_0433 hypothetical protein; SPTR: B9L893 Putative uncharacterized protein; hypothetical protein complement(2465785..2467260) Arcobacter nitrofigilis DSM 7299 9172648 YP_003656631.1 CDS Arnit_2474 NC_014166.1 2467263 2469374 R COGs: COG1298 Flagellar biosynthesis pathway component FlhA; InterPro IPR006301:IPR001712; KEGG: abu:Abu_1938 flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; SPTR: A8EW37 Flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA complement(2467263..2469374) Arcobacter nitrofigilis DSM 7299 9172649 YP_003656632.1 CDS Arnit_2475 NC_014166.1 2469390 2470508 R COGs: COG1344 Flagellin and related hook-associated protein; KEGG: abu:Abu_1939 flagellar hook-associated protein FlgL; SPTR: A8EW38 Flagellar hook-associated protein FlgL; PFAM: Bacterial flagellin N-terminal helical region; flagellar hook-associated protein FlgL complement(2469390..2470508) Arcobacter nitrofigilis DSM 7299 9172650 YP_003656633.1 CDS Arnit_2476 NC_014166.1 2470505 2471812 R COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR005714:IPR018538:IPR000194:IPR003593; KEGG: abu:Abu_1940 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; HerA-ATP synthase, barrel domain; PRIAM: H(+)-transporting two-sector ATPase; SMART: AAA ATPase; SPTR: A8EW39 Flagellum-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; FliI/YscN family ATPase complement(2470505..2471812) Arcobacter nitrofigilis DSM 7299 9172651 YP_003656634.1 CDS Arnit_2477 NC_014166.1 2471814 2473808 R KEGG: abu:Abu_1941 TPR repeat-containing protein; SPTR: A8EW40 Tetratricopeptide repeat domain protein; hypothetical protein complement(2471814..2473808) Arcobacter nitrofigilis DSM 7299 9172652 YP_003656635.1 CDS Arnit_2478 NC_014166.1 2473812 2474864 R COGs: COG1377 Flagellar biosynthesis pathway component FlhB; InterPro IPR006136:IPR006135; KEGG: abu:Abu_1942 flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; SPTR: A8EW41 Flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB complement(2473812..2474864) Arcobacter nitrofigilis DSM 7299 9172653 YP_003656636.1 CDS Arnit_2479 NC_014166.1 2474877 2475626 R COGs: COG1684 Flagellar biosynthesis pathway component FliR; InterPro IPR002010; KEGG: abu:Abu_1943 flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; SPTR: A8EW42 Flagellar biosynthetic protein FliR; PFAM: Bacterial export proteins, family 1; type III secretion system inner membrane R protein complement(2474877..2475626) Arcobacter nitrofigilis DSM 7299 9172654 YP_003656637.1 CDS Arnit_2480 NC_014166.1 2475626 2478067 R KEGG: abu:Abu_1944 hypothetical protein; SPTR: A8EW43 Hypothetical membrane protein; hypothetical protein complement(2475626..2478067) Arcobacter nitrofigilis DSM 7299 9172655 YP_003656638.1 CDS Arnit_2481 NC_014166.1 2478087 2478548 R COGs: COG1558 Flagellar basal body rod protein; InterPro IPR006299:IPR001444:IPR010930; KEGG: abu:Abu_1945 flagellar basal body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: A8EW44 Flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC complement(2478087..2478548) Arcobacter nitrofigilis DSM 7299 9172656 YP_003656639.1 CDS Arnit_2482 NC_014166.1 2478564 2478866 R InterPro IPR001624; KEGG: abu:Abu_1946 flagellar hook-basal body protein FliE; PFAM: flagellar hook-basal body complex protein FliE; SPTR: A8EW45 Flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE complement(2478564..2478866) Arcobacter nitrofigilis DSM 7299 9172657 YP_003656640.1 CDS Arnit_2483 NC_014166.1 2478878 2479204 R KEGG: abu:Abu_1947 hypothetical protein; SPTR: A8EW46 Putative uncharacterized protein; hypothetical protein complement(2478878..2479204) Arcobacter nitrofigilis DSM 7299 9172658 YP_003656641.1 CDS Arnit_2484 NC_014166.1 2479219 2480043 R COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: abu:Abu_1948 ATP-binding protein; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A8EW47 ATP-binding protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Cobyrinic acid ac-diamide synthase complement(2479219..2480043) Arcobacter nitrofigilis DSM 7299 9172659 YP_003656642.1 CDS Arnit_2485 NC_014166.1 2480052 2481212 R COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR020006:IPR000897:IPR003593; KEGG: abu:Abu_1949 flagellar biosynthesis (GTP-binding) protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; SPTR: A8EW48 Flagellar biosynthesis (GTP-binding) protein FlhF; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; flagellar biosynthetic protein FlhF complement(2480052..2481212) Arcobacter nitrofigilis DSM 7299 9172660 YP_003656643.1 CDS Arnit_2486 NC_014166.1 2481209 2481610 R KEGG: abu:Abu_1950 hypothetical protein; SPTR: A8EW49 Putative uncharacterized protein; hypothetical protein complement(2481209..2481610) Arcobacter nitrofigilis DSM 7299 9172661 YP_003656644.1 CDS Arnit_2487 NC_014166.1 2481594 2481971 R KEGG: abu:Abu_1951 hypothetical protein; SPTR: A8EW50 Putative uncharacterized protein; hypothetical protein complement(2481594..2481971) Arcobacter nitrofigilis DSM 7299 9172662 YP_003656645.1 CDS Arnit_2488 NC_014166.1 2481985 2482278 R KEGG: abu:Abu_1952 hypothetical protein; SPTR: A8EW51 Putative uncharacterized protein; PFAM: Rod binding protein; hypothetical protein complement(2481985..2482278) Arcobacter nitrofigilis DSM 7299 9172663 YP_003656646.1 CDS Arnit_2489 NC_014166.1 2482275 2483045 R COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: nam:NAMH_1161 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: A6DAM6 OmpA/MotB; PFAM: OmpA family; OmpA/MotB domain-containing protein complement(2482275..2483045) Arcobacter nitrofigilis DSM 7299 9172664 YP_003656647.1 CDS Arnit_2490 NC_014166.1 2483058 2483813 R COGs: COG1291 Flagellar motor component; InterPro IPR002898; KEGG: cco:CCC13826_0691 permease; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A7ZCS9 Chemotaxis protein PomA; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(2483058..2483813) Arcobacter nitrofigilis DSM 7299 9172665 YP_003656648.1 CDS Arnit_2491 NC_014166.1 2483817 2484698 R COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR001543:IPR001172; KEGG: abu:Abu_1953 flagellar motor switch protein FliY; PFAM: surface presentation of antigens (SPOA) protein; SPTR: A8EW52 Flagellar motor switch protein FliY; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; surface presentation of antigens (SPOA) protein complement(2483817..2484698) Arcobacter nitrofigilis DSM 7299 9172666 YP_003656649.1 CDS Arnit_2492 NC_014166.1 2484712 2485029 R KEGG: abu:Abu_1954 polar flagellin; SPTR: A8EW53 Polar flagellin; polar flagellin complement(2484712..2485029) Arcobacter nitrofigilis DSM 7299 9172667 YP_003656650.1 CDS Arnit_2493 NC_014166.1 2485113 2486981 R InterPro IPR019734:IPR013026:IPR001440; KEGG: abu:Abu_1955 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: A8EW54 TPR repeat protein; PFAM: Tetratricopeptide repeat; hypothetical protein complement(2485113..2486981) Arcobacter nitrofigilis DSM 7299 9172668 YP_003656651.1 CDS Arnit_2494 NC_014166.1 2487144 2487473 R KEGG: abu:Abu_1956 hypothetical protein; SPTR: A8EW55 Putative uncharacterized protein; hypothetical protein complement(2487144..2487473) Arcobacter nitrofigilis DSM 7299 9172669 YP_003656652.1 CDS Arnit_2495 NC_014166.1 2487522 2489873 R COGs: COG4786 Flagellar basal body rod protein; InterPro IPR020013:IPR001444:IPR010930; KEGG: abu:Abu_1957 flagellar hook protein FlgE; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8EW56 Flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; fagellar hook-basal body protein complement(2487522..2489873) Arcobacter nitrofigilis DSM 7299 9172670 YP_003656653.1 CDS Arnit_2496 NC_014166.1 2489951 2491414 R COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR019776:IPR020013:IPR001444:IPR010930; KEGG: abu:Abu_1958 flagellar hook protein FlgE; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8EW57 Flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; fagellar hook-basal body protein complement(2489951..2491414) Arcobacter nitrofigilis DSM 7299 9172671 YP_003656654.1 CDS Arnit_2497 NC_014166.1 2491424 2491894 R InterPro IPR005648; KEGG: abu:Abu_1959 flagellar hook assembly protein FlgD; PFAM: flagellar hook capping protein; SPTR: A8EW58 Flagellar hook assembly protein FlgD; PFAM: Flagellar hook capping protein; flagellar hook capping protein complement(2491424..2491894) Arcobacter nitrofigilis DSM 7299 9172672 YP_003656655.1 CDS Arnit_2498 NC_014166.1 2491904 2492191 R COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR001543:IPR001172; KEGG: abu:Abu_1960 flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; SPTR: A8EW59 Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; surface presentation of antigens (SPOA) protein complement(2491904..2492191) Arcobacter nitrofigilis DSM 7299 9172673 YP_003656656.1 CDS Arnit_2499 NC_014166.1 2492328 2492999 R InterPro IPR018035; KEGG: abu:Abu_1961 flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; SPTR: A8EW60 Flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH; flagellar assembly protein FliH/type III secretion system HrpE complement(2492328..2492999) Arcobacter nitrofigilis DSM 7299 9172674 YP_003656657.1 CDS Arnit_2500 NC_014166.1 2493004 2494008 R COGs: COG1536 Flagellar motor switch protein; InterPro IPR011002:IPR000090:IPR006668; KEGG: abu:Abu_1962 flagellar motor switch protein G; PFAM: flagellar motor switch protein FliG; MgtE intracellular region; SPTR: A8EW61 Flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(2493004..2494008) Arcobacter nitrofigilis DSM 7299 9172675 YP_003656658.1 CDS Arnit_2501 NC_014166.1 2494009 2495751 R COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; InterPro IPR000067:IPR006182:IPR013556; KEGG: abu:Abu_1963 flagellar M-ring protein FliF; PFAM: Flagellar M-ring domain protein; secretory protein YscJ/FliF family protein; SPTR: A8EW62 Flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar M-ring protein FliF complement(2494009..2495751) Arcobacter nitrofigilis DSM 7299 9172676 YP_003656659.1 CDS Arnit_2502 NC_014166.1 2495768 2496175 R COGs: COG1815 Flagellar basal body protein; InterPro IPR019776:IPR006300:IPR001444; KEGG: abu:Abu_1964 flagellar basal body rod protein FlgB; PFAM: flagellar basal body rod protein; SPTR: A8EW63 Flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB complement(2495768..2496175) Arcobacter nitrofigilis DSM 7299 9172677 YP_003656660.1 CDS Arnit_2503 NC_014166.1 2496178 2496903 R COGs: COG4786 Flagellar basal body rod protein; InterPro IPR019776:IPR020013:IPR001444:IPR010930; KEGG: abu:Abu_1965 flagellar distal rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8EW64 Flagellar distal rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; fagellar hook-basal body protein complement(2496178..2496903) Arcobacter nitrofigilis DSM 7299 9172678 YP_003656661.1 CDS Arnit_2504 NC_014166.1 2496907 2498052 R InterPro IPR018247; KEGG: abu:Abu_1966 hypothetical protein; SPTR: A8EW65 Putative uncharacterized protein; PFAM: Chemotaxis phosphatase, CheZ; hypothetical protein complement(2496907..2498052) Arcobacter nitrofigilis DSM 7299 9172679 YP_003656662.1 CDS Arnit_2505 NC_014166.1 2498073 2498444 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1967 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EW66 Chemotaxis protein CheY; PFAM: Response regulator receiver domain; response regulator receiver protein complement(2498073..2498444) Arcobacter nitrofigilis DSM 7299 9172680 YP_003656663.1 CDS Arnit_2506 NC_014166.1 2498597 2499388 D COGs: COG4786 Flagellar basal body rod protein; InterProIPR019776:IPR020013:IPR012834:IPR001444:IPR 010930; KEGG: abu:Abu_1968 flagellar distal rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8EW67 Flagellar distal rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgG 2498597..2499388 Arcobacter nitrofigilis DSM 7299 9172681 YP_003656664.1 CDS Arnit_2507 NC_014166.1 2499402 2499839 D KEGG: abu:Abu_1969 hypothetical protein; SPTR: A8EW68 Putative uncharacterized protein; hypothetical protein 2499402..2499839 Arcobacter nitrofigilis DSM 7299 9172682 YP_003656665.1 CDS Arnit_2508 NC_014166.1 2499842 2501101 D KEGG: abu:Abu_1970 hypothetical protein; SPTR: A8EW69 Putative uncharacterized protein; hypothetical protein 2499842..2501101 Arcobacter nitrofigilis DSM 7299 9172683 YP_003656666.1 CDS Arnit_2509 NC_014166.1 2501098 2501625 R COGs: COG0806 RimM protein required for 16S rRNA processing; InterPro IPR011961:IPR002676:IPR007903; KEGG: abu:Abu_1971 16S rRNA processing protein; PFAM: RimM protein; PRC-barrel domain protein; SPTR: A8EW70 Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein RimM complement(2501098..2501625) Arcobacter nitrofigilis DSM 7299 9172684 YP_003656667.1 CDS Arnit_2510 NC_014166.1 2501632 2501871 R COGs: COG1837 RNA-binding protein (contains KH domain); KEGG: abu:Abu_1972 hypothetical protein; SPTR: A8EW71 Putative uncharacterized protein; PFAM: KH domain; hypothetical protein complement(2501632..2501871) Arcobacter nitrofigilis DSM 7299 9172685 YP_003656668.1 CDS Arnit_2511 NC_014166.1 2501880 2502110 R COGs: COG0228 Ribosomal protein S16; InterPro IPR000307:IPR020592; KEGG: abu:Abu_1973 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: A8EW72 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 complement(2501880..2502110) Arcobacter nitrofigilis DSM 7299 9172686 YP_003656669.1 CDS Arnit_2512 NC_014166.1 2502196 2503551 R COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822:IPR004125:IPR000897:IPR004780:IPR 003593; KEGG: abu:Abu_1974 signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: A8EW73 Signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; signal recognition particle protein complement(2502196..2503551) Arcobacter nitrofigilis DSM 7299 9172687 YP_003656670.1 CDS Arnit_2513 NC_014166.1 2503725 2504474 R COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942:IPR020103:IPR006224:IPR006145; KEGG: abu:Abu_1975 ribosomal large subunit pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: A8EW74 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; pseudouridine synthase complement(2503725..2504474) Arcobacter nitrofigilis DSM 7299 9172688 YP_003656671.1 CDS Arnit_2515 NC_014166.1 2505613 2506332 R COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: abu:Abu_1977 hypothetical protein; PFAM: protein of unknown function DUF164; SPTR: A8EW76 Putative uncharacterized protein; PFAM: Putative zinc ribbon domain; hypothetical protein complement(2505613..2506332) Arcobacter nitrofigilis DSM 7299 9172690 YP_003656672.1 CDS Arnit_2516 NC_014166.1 2506329 2507081 R COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: abu:Abu_1978 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: A8EW77 Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486; hypothetical protein complement(2506329..2507081) Arcobacter nitrofigilis DSM 7299 9172691 YP_003656673.1 CDS Arnit_2517 NC_014166.1 2507081 2507962 R COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR006194:IPR002310; KEGG: abu:Abu_1979 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: A8EW78 Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; glycyl-tRNA synthetase subunit alpha complement(2507081..2507962) Arcobacter nitrofigilis DSM 7299 9172692 YP_003656674.1 CDS Arnit_2518 NC_014166.1 2508053 2508547 R COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: abu:Abu_1981 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: A8EW80 Phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(2508053..2508547) Arcobacter nitrofigilis DSM 7299 9172693 YP_003656675.1 CDS Arnit_2519 NC_014166.1 2508616 2512149 R COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR016196:IPR011701:IPR002123:IPR000873; KEGG: abu:Abu_0193 2-acyl-glycerophospho-ethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; SPTR: A8ER96 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase; PFAM: Acyltransferase; AMP-binding enzyme; Major Facilitator Superfamily; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; AMP-dependent synthetase and ligase complement(2508616..2512149) Arcobacter nitrofigilis DSM 7299 9172694 YP_003656676.1 CDS Arnit_2520 NC_014166.1 2512266 2513153 R COGs: COG2962 permease; InterPro IPR004626:IPR000620; KEGG: vfm:VFMJ11_0067 RarD protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: B5FFA0 RarD protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: EamA-like transporter family; Eukaryotic protein of unknown function (DUF914); TIGRFAM: rarD protein; RarD protein, DMT superfamily transporter complement(2512266..2513153) Arcobacter nitrofigilis DSM 7299 9172695 YP_003656677.1 CDS Arnit_2521 NC_014166.1 2513225 2514637 R COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625:IPR005075; KEGG: sil:SPO0528 hypothetical protein; PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; SPTR: B9R113 PepSY-associated TM helix family; PFAM: PepSY-associated TM helix; propeptide PepSY amd peptidase M4 complement(2513225..2514637) Arcobacter nitrofigilis DSM 7299 9172696 YP_003656678.1 CDS Arnit_2522 NC_014166.1 2514713 2514940 R InterPro IPR012335:IPR012336:IPR005243; KEGG: nis:NIS_0028 redox-active disulfide protein 2; SPTR: C2A086 Small redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2; redox-active disulfide protein 2 complement(2514713..2514940) Arcobacter nitrofigilis DSM 7299 9172697 YP_003656679.1 CDS Arnit_2523 NC_014166.1 2514940 2515284 R COGs: COG2105 conserved hypothetical protein; InterPro IPR013024:IPR009288; KEGG: abu:Abu_0185 hypothetical protein; PFAM: AIG2 family protein; SPTR: A8ER88 Putative uncharacterized protein; PFAM: AIG2-like family; AIG2 family protein complement(2514940..2515284) Arcobacter nitrofigilis DSM 7299 9172698 YP_003656680.1 CDS Arnit_2524 NC_014166.1 2515344 2515949 R KEGG: dma:DMR_07820 hypothetical membrane protein; SPTR: C4XJR8 Hypothetical membrane protein; hypothetical protein complement(2515344..2515949) Arcobacter nitrofigilis DSM 7299 9172699 YP_003656681.1 CDS Arnit_2525 NC_014166.1 2515953 2518052 R COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR012910:IPR000531:IPR010916:IPR010105; KEGG: ppf:Pput_2559 TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A3VRU0 Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(2515953..2518052) Arcobacter nitrofigilis DSM 7299 9172700 YP_003656682.1 CDS Arnit_2526 NC_014166.1 2518231 2519085 R COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR016040:IPR013328:IPR008927:IPR006115; KEGG: tye:THEYE_A0982 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; PRIAM: 2-hydroxy-3-oxopropionate reductase; SPTR: B5YKP9 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 2-hydroxy-3-oxopropionate reductase complement(2518231..2519085) Arcobacter nitrofigilis DSM 7299 9172701 YP_003656683.1 CDS Arnit_2527 NC_014166.1 2519160 2521073 R COGs: COG0021 Transketolase; InterProIPR015941:IPR009014:IPR020826:IPR005478:IPR 005474:IPR005475:IPR005476; KEGG: abu:Abu_0182 transketolase; PFAM: Transketolase domain protein; Transketolase central region; PRIAM: Formaldehyde transketolase; SPTR: A8ER85 Transketolase; TIGRFAM: transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; transketolase complement(2519160..2521073) Arcobacter nitrofigilis DSM 7299 9172702 YP_003656684.1 CDS Arnit_2528 NC_014166.1 2521182 2529617 R InterProIPR002035:IPR002126:IPR011049:IPR015919:IPR 001343; KEGG: sfr:Sfri_0436 putative outer membrane adhesin like proteiin; PFAM: von Willebrand factor type A; Cadherin; Hemolysin-type calcium-binding region; SMART: von Willebrand factor type A; Cadherin; SPTR: Q088L7 Putative outer membrane adhesin like proteiin; von Willebrand factor type A complement(2521182..2529617) Arcobacter nitrofigilis DSM 7299 9172703 YP_003656685.1 CDS Arnit_2529 NC_014166.1 2529733 2530539 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR005467:IPR003594:IPR004358; KEGG: abu:Abu_0362 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERR3 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase complement(2529733..2530539) Arcobacter nitrofigilis DSM 7299 9172704 YP_003656686.1 CDS Arnit_2530 NC_014166.1 2530542 2531258 R InterPro IPR011647; KEGG: ate:Athe_0718 KWG Leptospira repeat protein; PFAM: KWG Leptospira repeat protein; SPTR: B9MQ41 KWG Leptospira repeat protein; KWG repeat-containing protein complement(2530542..2531258) Arcobacter nitrofigilis DSM 7299 9172705 YP_003656687.1 CDS Arnit_2531 NC_014166.1 2531271 2532707 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006144:IPR010129:IPR006143:IPR003997; KEGG: asa:ASA_1670 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: A4SLH9 Secretion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein complement(2531271..2532707) Arcobacter nitrofigilis DSM 7299 9172706 YP_003656688.1 CDS Arnit_2532 NC_014166.1 2532700 2534862 R COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003439:IPR017940:IPR005074:IPR011527:IPR 017750:IPR003593; KEGG: ccv:CCV52592_0163 toxin secretion ATP-binding protein; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; SPTR: C3X6Z4 Toxin ABC transporter ATPase and permease; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; TIGRFAM: type I secretion system ATPase, LssB family; type I secretion system ATPase complement(2532700..2534862) Arcobacter nitrofigilis DSM 7299 9172707 YP_003656689.1 CDS Arnit_2533 NC_014166.1 2534884 2536698 R COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR007730; KEGG: drt:Dret_0562 type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; Sporulation domain protein; SPTR: C8WYU3 Type I secretion outer membrane protein, TolC family; PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(2534884..2536698) Arcobacter nitrofigilis DSM 7299 9172708 YP_003656690.1 CDS Arnit_2534 NC_014166.1 2536778 2537512 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR011991:IPR011006:IPR016032:IPR 001867; KEGG: abu:Abu_1868 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1ZWY0 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 2536778..2537512 Arcobacter nitrofigilis DSM 7299 9172709 YP_003656691.1 CDS Arnit_2535 NC_014166.1 2537520 2538986 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: drt:Dret_0562 type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; SPTR: Q1ZUL1 Putative agglutination protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(2537520..2538986) Arcobacter nitrofigilis DSM 7299 9172710 YP_003656692.1 CDS Arnit_2536 NC_014166.1 2539212 2541662 R COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: abu:Abu_1445 hypothetical protein; SPTR: A8EUS6 Conserved hypothetical integral membrane protein; PFAM: MMPL family; hypothetical protein complement(2539212..2541662) Arcobacter nitrofigilis DSM 7299 9172711 YP_003656693.1 CDS Arnit_2537 NC_014166.1 2541662 2542252 R COGs: COG2854 ABC-type transport system involved in resistance to organic solvents auxiliary component; InterPro IPR008869; KEGG: abu:Abu_1444 putative periplasmic protein; PFAM: toluene tolerance family protein; SPTR: A8EUS5 Putative periplasmic protein; PFAM: Toluene tolerance, Ttg2; toluene tolerance family protein complement(2541662..2542252) Arcobacter nitrofigilis DSM 7299 9172712 YP_003656694.1 CDS Arnit_2538 NC_014166.1 2542257 2542994 R COGs: COG2853 Surface lipoprotein; InterPro IPR007428; KEGG: abu:Abu_1443 VacJ-like lipoprotein; PFAM: VacJ family lipoprotein; SPTR: A8EUS4 VacJ-like lipoprotein; PFAM: VacJ like lipoprotein; VacJ family lipoprotein complement(2542257..2542994) Arcobacter nitrofigilis DSM 7299 9172713 YP_003656695.1 CDS Arnit_2539 NC_014166.1 2543103 2544833 R COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR003869; KEGG: abu:Abu_0696 sugar epimerase/dehydratase; PFAM: polysaccharide biosynthesis protein CapD; SPTR: C1ZZP7 Predicted nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD complement(2543103..2544833) Arcobacter nitrofigilis DSM 7299 9172714 YP_003656696.1 CDS Arnit_2540 NC_014166.1 2544833 2545795 R COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: abu:Abu_0694 glycosyltransferase; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: A8ESN5 Glycosyltransferase; PFAM: Glycosyl transferase family 4; family 4 glycosyl transferase complement(2544833..2545795) Arcobacter nitrofigilis DSM 7299 9172715 YP_003656697.1 CDS Arnit_2541 NC_014166.1 2545792 2546652 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: fnu:FN1694 UDP-N-acetyl-D-quinovosamine 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1ZZP4 Nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(2545792..2546652) Arcobacter nitrofigilis DSM 7299 9172716 YP_003656698.1 CDS Arnit_2542 NC_014166.1 2546649 2547761 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pay:PAU_04339 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Q2C5V2 Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2546649..2547761) Arcobacter nitrofigilis DSM 7299 9172717 YP_003656699.1 CDS Arnit_2543 NC_014166.1 2547754 2549652 R COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR017932:IPR014729:IPR006426:IPR000583:IPR 001962; KEGG: abu:Abu_0678 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II; SPTR: A8ESL9 Asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase complement(2547754..2549652) Arcobacter nitrofigilis DSM 7299 9172718 YP_003656700.1 CDS Arnit_2544 NC_014166.1 2549640 2550002 R KEGG: par:Psyc_0669 hypothetical protein; SPTR: Q4FTY0 Putative uncharacterized protein; hypothetical protein complement(2549640..2550002) Arcobacter nitrofigilis DSM 7299 9172719 YP_003656701.1 CDS Arnit_2545 NC_014166.1 2549995 2551122 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abu:Abu_0677 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A8ESL8 Glycosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2549995..2551122) Arcobacter nitrofigilis DSM 7299 9172720 YP_003656702.1 CDS Arnit_2546 NC_014166.1 2551122 2552816 R COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003439:IPR017940:IPR011527:IPR017871:IPR 001140:IPR003593; KEGG: abu:Abu_0675 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A8ESL6 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter-like protein complement(2551122..2552816) Arcobacter nitrofigilis DSM 7299 9172721 YP_003656703.1 CDS Arnit_2547 NC_014166.1 2552831 2554639 R COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR017932:IPR014729:IPR006426:IPR000583:IPR 001962; KEGG: abu:Abu_0678 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: A6DEM6 Probable asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase complement(2552831..2554639) Arcobacter nitrofigilis DSM 7299 9172722 YP_003656704.1 CDS Arnit_2548 NC_014166.1 2554632 2555447 R InterPro IPR013217; KEGG: mgm:Mmc1_0495 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: A7BQK1 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase domain; type 12 methyltransferase complement(2554632..2555447) Arcobacter nitrofigilis DSM 7299 9172723 YP_003656705.1 CDS Arnit_2549 NC_014166.1 2555440 2556930 R KEGG: cbs:COXBURSA331_A1113 hypothetical protein; SPTR: C6MR21 Putative uncharacterized protein; hypothetical protein complement(2555440..2556930) Arcobacter nitrofigilis DSM 7299 9172724 YP_003656706.1 CDS Arnit_2550 NC_014166.1 2556923 2558113 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dth:DICTH_0815 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C6MR24 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2556923..2558113) Arcobacter nitrofigilis DSM 7299 9172725 YP_003656707.1 CDS Arnit_2551 NC_014166.1 2558110 2559174 R KEGG: cbh:CLC_2593 hypothetical protein; SPTR: Q0YTX7 Putative uncharacterized protein; hypothetical protein complement(2558110..2559174) Arcobacter nitrofigilis DSM 7299 9172726 YP_003656708.1 CDS Arnit_2552 NC_014166.1 2559167 2560102 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: mag:amb0056 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B6BKH8 Nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(2559167..2560102) Arcobacter nitrofigilis DSM 7299 9172727 YP_003656709.1 CDS Arnit_2553 NC_014166.1 2560104 2560463 R InterPro IPR011051:IPR008894; KEGG: phe:Phep_0251 WxcM domain protein domain protein; PFAM: WxcM domain protein domain protein; SPTR: A7AB17 Putative uncharacterized protein; PFAM: WxcM-like, C-terminal; WxcM domain-containing protein complement(2560104..2560463) Arcobacter nitrofigilis DSM 7299 9172728 YP_003656710.1 CDS Arnit_2554 NC_014166.1 2560480 2561379 R KEGG: saq:Sare_2944 hypothetical protein; SPTR: Q2PC39 Putative uncharacterized protein rubN7; hypothetical protein complement(2560480..2561379) Arcobacter nitrofigilis DSM 7299 9172729 YP_003656711.1 CDS Arnit_2555 NC_014166.1 2561381 2562364 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: cch:Cag_0671 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q0YTU0 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(2561381..2562364) Arcobacter nitrofigilis DSM 7299 9172730 YP_003656712.1 CDS Arnit_2556 NC_014166.1 2562361 2563113 R KEGG: mag:amb0050 hypothetical protein; SPTR: Q0YTT9 Putative uncharacterized protein; hypothetical protein complement(2562361..2563113) Arcobacter nitrofigilis DSM 7299 9172731 YP_003656713.1 CDS Arnit_2557 NC_014166.1 2563115 2564203 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015422:IPR015424; KEGG: tsi:TSIB_2051 predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Thermoanaerobacter; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: C6A0B7 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Thermoanaerobacter; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; glutamine--scyllo-inositol transaminase complement(2563115..2564203) Arcobacter nitrofigilis DSM 7299 9172732 YP_003656714.1 CDS Arnit_2558 NC_014166.1 2564203 2565426 R InterPro IPR013630:IPR013217:IPR013691; KEGG: mag:amb0051 SAM-dependent methyltransferase; PFAM: C-methyltransferase; Methyltransferase domain protein; Methyltransferase type 12; SPTR: B6BKG8 SAM-dependent methyltransferase; PFAM: C-methyltransferase; Methyltransferase domain; Hypothetical methyltransferase; C-methyltransferase complement(2564203..2565426) Arcobacter nitrofigilis DSM 7299 9172733 YP_003656715.1 CDS Arnit_2559 NC_014166.1 2565492 2566499 R COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR016040:IPR005888:IPR001509; KEGG: abu:Abu_1816 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1ZZN1 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(2565492..2566499) Arcobacter nitrofigilis DSM 7299 9172734 YP_003656716.1 CDS Arnit_2560 NC_014166.1 2566496 2567065 R COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888:IPR014710:IPR011051; KEGG: drm:Dred_3037 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: B6BKG6 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(2566496..2567065) Arcobacter nitrofigilis DSM 7299 9172735 YP_003656717.1 CDS Arnit_2561 NC_014166.1 2567062 2567943 R COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907:IPR005835; KEGG: cts:Ctha_2064 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: B3QV15 Glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase complement(2567062..2567943) Arcobacter nitrofigilis DSM 7299 9172736 YP_003656718.1 CDS Arnit_2562 NC_014166.1 2567940 2569016 R COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: cbc:CbuK_0704 radical SAM superfamily protein; PFAM: Radical SAM domain protein; SPTR: C6MR25 Radical SAM domain protein; radical SAM domain-containing protein complement(2567940..2569016) Arcobacter nitrofigilis DSM 7299 9172737 YP_003656719.1 CDS Arnit_2564 NC_014166.1 2569405 2570076 R COGs: COG1045 Serine acetyltransferase; InterPro IPR011004:IPR020019:IPR001451; KEGG: lip:LIB012 acetyltransferase; SPTR: Q1MNZ3 Acetyltransferases; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family complement(2569405..2570076) Arcobacter nitrofigilis DSM 7299 9172739 YP_003656720.1 CDS Arnit_2565 NC_014166.1 2570178 2572178 R COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR017932:IPR014729:IPR006426:IPR000583:IPR 001962; KEGG: abu:Abu_0668 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: A8ESK9 Asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; Glutamine amidotransferases class-II; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase complement(2570178..2572178) Arcobacter nitrofigilis DSM 7299 9172740 YP_003656721.1 CDS Arnit_2566 NC_014166.1 2572180 2573370 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015422:IPR015424; KEGG: abu:Abu_0667 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8ESK8 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; DegT/DnrJ/EryC1/StrS aminotransferase complement(2572180..2573370) Arcobacter nitrofigilis DSM 7299 9172741 YP_003656722.1 CDS Arnit_2567 NC_014166.1 2573375 2574358 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: abu:Abu_0666 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8ESK7 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(2573375..2574358) Arcobacter nitrofigilis DSM 7299 9172742 YP_003656723.1 CDS Arnit_2568 NC_014166.1 2574392 2575525 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015422:IPR015424; KEGG: abu:Abu_0664 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8ESK5 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; DegT/DnrJ/EryC1/StrS aminotransferase complement(2574392..2575525) Arcobacter nitrofigilis DSM 7299 9172743 YP_003656724.1 CDS Arnit_2569 NC_014166.1 2575528 2576106 R COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR011004:IPR018357:IPR001451; KEGG: abu:Abu_0663 hypothetical protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: A8ESK4 Putative uncharacterized protein; transferase hexapeptide repeat containing protein complement(2575528..2576106) Arcobacter nitrofigilis DSM 7299 9172744 YP_003656725.1 CDS Arnit_2570 NC_014166.1 2576110 2577078 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: abu:Abu_0662 hypothetical protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: A8ESK3 Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase domain-containing protein complement(2576110..2577078) Arcobacter nitrofigilis DSM 7299 9172745 YP_003656726.1 CDS Arnit_2571 NC_014166.1 2577081 2578328 R COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterProIPR016040:IPR014027:IPR008927:IPR017476:IPR 001732:IPR014026; KEGG: abu:Abu_0661 UDP-hexose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: A8ESK2 UDP-hexose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(2577081..2578328) Arcobacter nitrofigilis DSM 7299 9172746 YP_003656727.1 CDS Arnit_2572 NC_014166.1 2578328 2579449 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509:IPR008089; KEGG: abu:Abu_0660 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8ESK1 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(2578328..2579449) Arcobacter nitrofigilis DSM 7299 9172747 YP_003656728.1 CDS Arnit_2573 NC_014166.1 2579452 2579808 R InterPro IPR012657; KEGG: fph:Fphi_1248 hypothetical protein; SPTR: B0TXL5 Putative uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436; hypothetical protein complement(2579452..2579808) Arcobacter nitrofigilis DSM 7299 9172748 YP_003656729.1 CDS Arnit_2574 NC_014166.1 2579856 2581073 R COGs: COG1004 UDP-glucose 6-dehydrogenase; InterProIPR016040:IPR014027:IPR008927:IPR017476:IPR 001732:IPR014026; KEGG: tdn:Suden_1968 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: Q30P39 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(2579856..2581073) Arcobacter nitrofigilis DSM 7299 9172749 YP_003656730.1 CDS Arnit_2575 NC_014166.1 2581070 2581834 R InterPro IPR003856; KEGG: nam:NAMH_1653 chain length determinant protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: C1ZZP8 Chain length determinant protein; PFAM: Chain length determinant protein; lipopolysaccharide biosynthesis protein complement(2581070..2581834) Arcobacter nitrofigilis DSM 7299 9172750 YP_003656731.1 CDS Arnit_2576 NC_014166.1 2581821 2582840 R COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR016040:IPR005886:IPR001509; KEGG: saf:SULAZ_0910 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1DUU6 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-glucose 4-epimerase complement(2581821..2582840) Arcobacter nitrofigilis DSM 7299 9172751 YP_003656732.1 CDS Arnit_2577 NC_014166.1 2583489 2585177 D COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558:IPR004404:IPR000581; KEGG: abu:Abu_2100 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: A8EWJ4 Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 2583489..2585177 Arcobacter nitrofigilis DSM 7299 9172755 YP_003656733.1 CDS Arnit_2578 NC_014166.1 2585290 2586732 D COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterProIPR001478:IPR009003:IPR011782:IPR001254:IPR 001940; KEGG: abu:Abu_2099 periplasmic serine protease DO; heat shock protein HtrA; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8EWJ3 Periplasmic serine protease DO; heat shock protein HtrA; TIGRFAM: protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; protease Do 2585290..2586732 Arcobacter nitrofigilis DSM 7299 9172756 YP_003656734.1 CDS Arnit_2579 NC_014166.1 2586758 2587417 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_2098 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EWJ2 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 2586758..2587417 Arcobacter nitrofigilis DSM 7299 9172757 YP_003656735.1 CDS Arnit_2580 NC_014166.1 2587414 2588634 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR003594:IPR009082:IPR 003661; KEGG: abu:Abu_2097 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: A8EWJ1 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 2587414..2588634 Arcobacter nitrofigilis DSM 7299 9172758 YP_003656736.1 CDS Arnit_2581 NC_014166.1 2588640 2589917 R COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: abu:Abu_1983 U32 family peptidase; PFAM: peptidase U32; SPTR: A8EW82 Peptidase, U32 family; PFAM: Peptidase family U32; peptidase U32 complement(2588640..2589917) Arcobacter nitrofigilis DSM 7299 9172759 YP_003656737.1 CDS Arnit_2582 NC_014166.1 2590037 2591572 R COGs: COG0497 ATPase involved in DNA repair; InterPro IPR017871:IPR003395; KEGG: abu:Abu_1985 DNA repair protein RecN; PFAM: SMC domain protein; SPTR: A8EW84 DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; SMC domain-containing protein complement(2590037..2591572) Arcobacter nitrofigilis DSM 7299 9172760 YP_003656738.1 CDS Arnit_2583 NC_014166.1 2591579 2592445 R COGs: COG0061 sugar kinase; InterPro IPR017437:IPR016064:IPR002504; KEGG: abu:Abu_1986 NAD(+) kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: A8EW85 NAD(+) kinase; PFAM: ATP-NAD kinase; ATP-NAD/AcoX kinase complement(2591579..2592445) Arcobacter nitrofigilis DSM 7299 9172761 YP_003656739.1 CDS Arnit_2584 NC_014166.1 2592464 2593804 R InterPro IPR006144:IPR010129:IPR006143:IPR003997; KEGG: vex:VEA_001011 ABC-type protease exporter membrane fusion protein (MFP) family component PrtE/AprE; PFAM: secretion protein HlyD family protein; SPTR: A6CWJ0 Secretion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein complement(2592464..2593804) Arcobacter nitrofigilis DSM 7299 9172762 YP_003656740.1 CDS Arnit_2585 NC_014166.1 2593816 2595969 R COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003439:IPR017940:IPR005074:IPR011527:IPR 017750:IPR001140:IPR003593; KEGG: mmw:Mmwyl1_2824 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase; SPTR: A3Y7L5 Putative toxin secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ATPase, LssB family; type I secretion system ATPase complement(2593816..2595969) Arcobacter nitrofigilis DSM 7299 9172763 YP_003656741.1 CDS Arnit_2586 NC_014166.1 2595959 2598013 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ppr:PBPRB0583 putative agglutination protein; PFAM: outer membrane efflux protein; SPTR: Q1ZUL1 Putative agglutination protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(2595959..2598013) Arcobacter nitrofigilis DSM 7299 9172764 YP_003656742.1 CDS Arnit_2587 NC_014166.1 2598153 2600261 R COGs: COG0480 Translation elongation factors (GTPase); InterProIPR014721:IPR000640:IPR020568:IPR009000:IPR 009022:IPR000795:IPR004540:IPR005225:IPR004161:IPR005517; KEGG: abu:Abu_1987 translational elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; SPTR: A8EW86 Elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G complement(2598153..2600261) Arcobacter nitrofigilis DSM 7299 9172765 YP_003656743.1 CDS Arnit_2588 NC_014166.1 2600271 2600738 R COGs: COG0049 Ribosomal protein S7; InterPro IPR000235:IPR005717; KEGG: abu:Abu_1988 30S ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: A8EW87 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 complement(2600271..2600738) Arcobacter nitrofigilis DSM 7299 9172766 YP_003656744.1 CDS Arnit_2589 NC_014166.1 2600755 2601138 R COGs: COG0048 Ribosomal protein S12; InterPro IPR006032:IPR012340:IPR016027:IPR005679; KEGG: abu:Abu_1989 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: A8EW88 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 complement(2600755..2601138) Arcobacter nitrofigilis DSM 7299 9172767 YP_003656745.1 CDS Arnit_2590 NC_014166.1 2601391 2603514 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_1749 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EVM3 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer complement(2601391..2603514) Arcobacter nitrofigilis DSM 7299 9172768 YP_003656746.1 CDS Arnit_2591 NC_014166.1 2603661 2604821 D COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: abu:Abu_1991 putative transport protein AraJ; PFAM: major facilitator superfamily MFS_1; SPTR: A8EW90 Putative transport protein AraJ; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; major facilitator superfamily protein 2603661..2604821 Arcobacter nitrofigilis DSM 7299 9172769 YP_003656747.1 CDS Arnit_2592 NC_014166.1 2604818 2605588 D COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: abu:Abu_1990 alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: A8EW89 Alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2604818..2605588 Arcobacter nitrofigilis DSM 7299 9172770 YP_003656748.1 CDS Arnit_2593 NC_014166.1 2605574 2606194 R KEGG: rlt:Rleg2_5769 filamentous haemagglutinin family outer membrane protein; SPTR: B5JIN5 Putative uncharacterized protein; hypothetical protein complement(2605574..2606194) Arcobacter nitrofigilis DSM 7299 9172771 YP_003656749.1 CDS Arnit_2594 NC_014166.1 2606290 2606943 R InterPro IPR019410; KEGG: dat:HRM2_03590 putative 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase-16, putative; SPTR: Q0F3H3 Putative uncharacterized protein; PFAM: Putative methyltransferase; methyltransferase-16 complement(2606290..2606943) Arcobacter nitrofigilis DSM 7299 9172772 YP_003656750.1 CDS Arnit_2595 NC_014166.1 2606990 2607811 R InterPro IPR004256; KEGG: abu:Abu_1277 hypothetical protein; PFAM: DUF234 DEXX-box ATPase; SPTR: A8EUB0 Putative uncharacterized protein; PFAM: Archaea bacterial proteins of unknown function; hypothetical protein complement(2606990..2607811) Arcobacter nitrofigilis DSM 7299 9172773 YP_003656751.1 CDS Arnit_2596 NC_014166.1 2607935 2608912 D InterPro IPR005135; KEGG: abu:Abu_0412 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: A8ERW3 Putative uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 2607935..2608912 Arcobacter nitrofigilis DSM 7299 9172774 YP_003656752.1 CDS Arnit_2597 NC_014166.1 2608909 2609538 R COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: ctc:CTC02186 homoserine/homoserine lactone efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q892B9 Homoserine/homoserine lactone efflux protein; PFAM: LysE type translocator; lysine exporter protein complement(2608909..2609538) Arcobacter nitrofigilis DSM 7299 9172775 YP_003656753.1 CDS Arnit_2598 NC_014166.1 2609547 2609996 R COGs: COG1671 conserved hypothetical protein; InterPro IPR003791; KEGG: tdn:Suden_0449 hypothetical protein; PFAM: protein of unknown function DUF188; SPTR: B6BJ97 Putative uncharacterized protein; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein complement(2609547..2609996) Arcobacter nitrofigilis DSM 7299 9172776 YP_003656754.1 CDS Arnit_2599 NC_014166.1 2609996 2610190 R COGs: COG4895 conserved hypothetical protein; InterPro IPR019240; KEGG: abu:Abu_0583 hypothetical protein; PFAM: Protein of unknown function DUF2196; SPTR: A8ESC6 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2196); hypothetical protein complement(2609996..2610190) Arcobacter nitrofigilis DSM 7299 9172777 YP_003656755.1 CDS Arnit_2600 NC_014166.1 2610295 2611080 D KEGG: swp:swp_3852 hypothetical protein; SPTR: B8CQR3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3147); hypothetical protein 2610295..2611080 Arcobacter nitrofigilis DSM 7299 9172778 YP_003656756.1 CDS Arnit_2601 NC_014166.1 2611083 2612156 R InterPro IPR006342; KEGG: cko:CKO_01019 hypothetical protein; SPTR: B6BJX9 Probable methyltransferase, putative; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family; FkbM family methyltransferase complement(2611083..2612156) Arcobacter nitrofigilis DSM 7299 9172779 YP_003656757.1 CDS Arnit_2602 NC_014166.1 2612192 2613091 R COGs: COG0320 Lipoate synthase; InterPro IPR013785:IPR003698:IPR007197:IPR006638; KEGG: abu:Abu_1470 lipoyl synthase; PFAM: Radical SAM domain protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EUV1 Lipoic acid synthetase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; lipoic acid synthetase complement(2612192..2613091) Arcobacter nitrofigilis DSM 7299 9172780 YP_003656758.1 CDS Arnit_2603 NC_014166.1 2613093 2613857 R COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: abu:Abu_1471 biotin/lipoate A/B protein ligase family protein; PFAM: biotin/lipoate A/B protein ligase; SPTR: A8EUV2 Biotin/lipoate A/B protein ligase family protein; PFAM: Biotin/lipoate A/B protein ligase family; biotin/lipoate A/B protein ligase complement(2613093..2613857) Arcobacter nitrofigilis DSM 7299 9172781 YP_003656759.1 CDS Arnit_2604 NC_014166.1 2614185 2616869 D COGs: COG2609 Pyruvate dehydrogenase complex dehydrogenase (E1) component; InterPro IPR004660:IPR015941:IPR009014:IPR005474; KEGG: abu:Abu_1472 pyruvate dehydrogenase subunit E1; PFAM: Transketolase domain protein; SPTR: A8EUV3 Pyruvate dehydrogenase E1 component; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type; 2-oxo-acid dehydrogenase E1 subunit, homodimeric type 2614185..2616869 Arcobacter nitrofigilis DSM 7299 9172782 YP_003656760.1 CDS Arnit_2605 NC_014166.1 2616880 2618601 D COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterProIPR000089:IPR004167:IPR011053:IPR003016:IPR 006256:IPR001078; KEGG: abu:Abu_1473 dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; PRIAM: Dihydrolipoyllysine-residue acetyltransferase; SPTR: A8EUV4 Dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 2616880..2618601 Arcobacter nitrofigilis DSM 7299 9172783 YP_003656761.1 CDS Arnit_2606 NC_014166.1 2618611 2620377 D COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR000089:IPR004099:IPR016156:IPR011053:IPR 012999:IPR003016:IPR006258:IPR013027:IPR000815; KEGG: abu:Abu_1474 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; biotin/lipoyl attachment domain-containing protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: A8EUV5 Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 2618611..2620377 Arcobacter nitrofigilis DSM 7299 9172784 YP_003656762.1 CDS Arnit_2607 NC_014166.1 2620407 2620964 D KEGG: msy:MS53_0073 hypothetical protein; SPTR: C4XFE6 Putative uncharacterized protein; hypothetical protein 2620407..2620964 Arcobacter nitrofigilis DSM 7299 9172785 YP_003656763.1 CDS Arnit_2608 NC_014166.1 2620948 2621466 R InterPro IPR013831:IPR013830:IPR001087; KEGG: abu:Abu_2183 lipolytic protein; PFAM: lipolytic protein G-D-S-L family; SPTR: A8EWS4 Lipolytic enzyme, GDSL domain; PFAM: GDSL-like Lipase/Acylhydrolase; G-D-S-L family lipolytic protein complement(2620948..2621466) Arcobacter nitrofigilis DSM 7299 9172786 YP_003656764.1 CDS Arnit_2609 NC_014166.1 2621504 2622151 R COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: abu:Abu_0938 cobalt ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETC4 Cobalt ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter; ABC transporter-like protein complement(2621504..2622151) Arcobacter nitrofigilis DSM 7299 9172787 YP_003656765.1 CDS Arnit_2610 NC_014166.1 2622148 2622795 R InterPro IPR003339; KEGG: abu:Abu_0937 cobalt ABC transporter, permease protein, putative; PFAM: cobalt transport protein; SPTR: A8ETC3 Cobalt ABC transporter, permease protein, putative; PFAM: Cobalt transport protein; cobalt transport protein complement(2622148..2622795) Arcobacter nitrofigilis DSM 7299 9172788 YP_003656766.1 CDS Arnit_2611 NC_014166.1 2622792 2623205 R KEGG: abu:Abu_0936 hypothetical protein; SPTR: A8ETC2 Putative uncharacterized protein; hypothetical protein complement(2622792..2623205) Arcobacter nitrofigilis DSM 7299 9172789 YP_003656767.1 CDS Arnit_2612 NC_014166.1 2623202 2623801 R COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: abu:Abu_0935 cobalamin (vitamin B12) biosynthesis protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: A8ETC1 Cobalamin (Vitamin B12) biosynthesis protein; PFAM: Cobalt uptake substrate-specific transmembrane region; cobalamin (vitamin B12) biosynthesis protein CbiM complement(2623202..2623801) Arcobacter nitrofigilis DSM 7299 9172790 YP_003656768.1 CDS Arnit_2613 NC_014166.1 2623801 2624529 R COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: abu:Abu_0934 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: A8ETC0 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region; nickel transport complex subunit NikM complement(2623801..2624529) Arcobacter nitrofigilis DSM 7299 9172791 YP_003656769.1 CDS Arnit_2614 NC_014166.1 2624660 2624947 R COGs: COG2350 conserved hypothetical protein; InterPro IPR011008:IPR005545; KEGG: abu:Abu_1881 hypothetical protein; PFAM: YCII-related; SPTR: A8EVZ1 Putative uncharacterized protein; PFAM: YCII-related domain; hypothetical protein complement(2624660..2624947) Arcobacter nitrofigilis DSM 7299 9172792 YP_003656770.1 CDS Arnit_2615 NC_014166.1 2625009 2625404 R KEGG: abu:Abu_1882 hypothetical protein; SPTR: A8EVZ2 Putative uncharacterized protein; hypothetical protein complement(2625009..2625404) Arcobacter nitrofigilis DSM 7299 9172793 YP_003656771.1 CDS Arnit_2616 NC_014166.1 2625440 2629966 R COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterProIPR007080:IPR000722:IPR012754:IPR007066:IPR 007083:IPR007081:IPR006592; KEGG: abu:Abu_1883 DNA-directed RNA polymerase, beta' chain; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: A8EVZ3 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' complement(2625440..2629966) Arcobacter nitrofigilis DSM 7299 9172794 YP_003656772.1 CDS Arnit_2617 NC_014166.1 2629959 2634104 R COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR007121:IPR010243:IPR007644:IPR007642:IPR 007645:IPR019462:IPR007120:IPR007641; KEGG: abu:Abu_1884 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; PRIAM: DNA-directed RNA polymerase; SPTR: A8EVZ4 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta complement(2629959..2634104) Arcobacter nitrofigilis DSM 7299 9172795 YP_003656773.1 CDS Arnit_2618 NC_014166.1 2634279 2634650 R COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR013823:IPR014719:IPR008932:IPR000206; KEGG: abu:Abu_1885 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: A8EVZ5 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(2634279..2634650) Arcobacter nitrofigilis DSM 7299 9172796 YP_003656774.1 CDS Arnit_2619 NC_014166.1 2634704 2635192 R COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: abu:Abu_1886 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: A8EVZ6 50S ribosomal protein L10; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 complement(2634704..2635192) Arcobacter nitrofigilis DSM 7299 9172797 YP_003656775.1 CDS Arnit_2620 NC_014166.1 2635417 2636118 R COGs: COG0081 Ribosomal protein L1; InterPro IPR002143:IPR016094:IPR005878; KEGG: abu:Abu_1887 50S ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: A8EVZ7 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 complement(2635417..2636118) Arcobacter nitrofigilis DSM 7299 9172798 YP_003656776.1 CDS Arnit_2621 NC_014166.1 2636216 2636641 R COGs: COG0080 Ribosomal protein L11; InterProIPR020784:IPR020783:IPR020785:IPR006519:IPR 000911; KEGG: abu:Abu_1888 50S ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: A8EVZ8 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 complement(2636216..2636641) Arcobacter nitrofigilis DSM 7299 9172799 YP_003656777.1 CDS Arnit_2622 NC_014166.1 2636739 2637266 R COGs: COG0250 Transcription antiterminator; InterPro IPR006645:IPR008991:IPR015869:IPR001062; KEGG: abu:Abu_1889 transcription antitermination protein NusG; PFAM: NGN domain protein; SMART: NGN domain protein; SPTR: A8EVZ9 Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG; NusG antitermination factor complement(2636739..2637266) Arcobacter nitrofigilis DSM 7299 9172800 YP_003656778.1 CDS Arnit_2623 NC_014166.1 2637277 2637459 R InterPro IPR005807; KEGG: abu:Abu_1890 preprotein translocase subunit SecE; SPTR: A8EW00 Preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; preprotein translocase subunit SecE complement(2637277..2637459) Arcobacter nitrofigilis DSM 7299 9172801 YP_003656779.1 CDS Arnit_2624 NC_014166.1 2637648 2637815 R InterPro IPR018264:IPR001705; KEGG: abu:Abu_1892 50S ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: A8EW01 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 complement(2637648..2637815) Arcobacter nitrofigilis DSM 7299 9172803 YP_003656780.1 CDS Arnit_2625 NC_014166.1 2637824 2639032 R COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: abu:Abu_1893 elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: A8EW02 Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu complement(2637824..2639032) Arcobacter nitrofigilis DSM 7299 9172804 YP_003656781.1 CDS Arnit_2626 NC_014166.1 2639727 2640881 R COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013221:IPR004101:IPR018109:IPR005762; KEGG: abu:Abu_1898 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: A8EW03 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(2639727..2640881) Arcobacter nitrofigilis DSM 7299 9172809 YP_003656782.1 CDS Arnit_2627 NC_014166.1 2640889 2641950 R COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480:IPR003524:IPR018481; KEGG: abu:Abu_1899 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; PRIAM:Phospho-N-acetylmuramoyl-pentapeptide-transfe rase; SPTR: A8EW04 Phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-trans ferase; PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(2640889..2641950) Arcobacter nitrofigilis DSM 7299 9172810 YP_003656783.1 CDS Arnit_2628 NC_014166.1 2642018 2643493 D COGs: COG0696 Phosphoglyceromutase; InterProIPR005995:IPR017849:IPR011258:IPR017850:IPR 006124; KEGG: abu:Abu_1900 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; SPTR: A8EW05 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; phosphoglycerate mutase 2642018..2643493 Arcobacter nitrofigilis DSM 7299 9172811 YP_003656784.1 CDS Arnit_2629 NC_014166.1 2643503 2644201 D COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: abu:Abu_1901 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8EW06 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 2643503..2644201 Arcobacter nitrofigilis DSM 7299 9172812 YP_003656785.1 CDS Arnit_2630 NC_014166.1 2644201 2646285 D COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR011816:IPR001264:IPR001460; KEGG: abu:Abu_1902 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: A8EW07 Penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; penicillin-binding protein 2644201..2646285 Arcobacter nitrofigilis DSM 7299 9172813 YP_003656786.1 CDS Arnit_2631 NC_014166.1 2646346 2647773 R COGs: COG0174 Glutamine synthetase; InterPro IPR014746:IPR008147:IPR008146:IPR004809; KEGG: abu:Abu_1903 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: A8EW08 Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase complement(2646346..2647773) Arcobacter nitrofigilis DSM 7299 9172814 YP_003656787.1 CDS Arnit_2632 NC_014166.1 2647898 2648680 R COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR016195:IPR010140:IPR004013; KEGG: abu:Abu_1904 histidinol-phosphate phosphatase; PFAM: PHP domain protein; SPTR: A8EW09 Histidinol-phosphate phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; HisJ family histidinol phosphate phosphatase complement(2647898..2648680) Arcobacter nitrofigilis DSM 7299 9172815 YP_003656788.1 CDS Arnit_2633 NC_014166.1 2648677 2649129 R COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: abu:Abu_1905 molybdopterin converting factor, subunit 2; PFAM: molybdopterin biosynthesis MoaE protein; SPTR: A8EW10 Molybdopterin converting factor, subunit 2; PFAM: MoaE protein; molybdopterin biosynthesis MoaE protein complement(2648677..2649129) Arcobacter nitrofigilis DSM 7299 9172816 YP_003656789.1 CDS Arnit_2634 NC_014166.1 2649159 2649380 R InterPro IPR016155:IPR003749; KEGG: abu:Abu_1906 molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; SPTR: A8EW11 Molybdopterin converting factor, subunit 1; PFAM: ThiS family; sulfur transfer protein ThiS complement(2649159..2649380) Arcobacter nitrofigilis DSM 7299 9172817 YP_003656790.1 CDS Arnit_2635 NC_014166.1 2649444 2650100 D COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: abu:Abu_1907 hypothetical protein; PFAM: protein of unknown function DUF178; SPTR: A8EW12 Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178); hypothetical protein 2649444..2650100 Arcobacter nitrofigilis DSM 7299 9172818 YP_003656791.1 CDS Arnit_2636 NC_014166.1 2650110 2650877 D COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: abu:Abu_1908 undecaprenyl diphosphatase, putative; PFAM: Bacitracin resistance protein BacA; PRIAM: Undecaprenyl-diphosphatase; SPTR: B6BHN0 Undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenol kinase 2650110..2650877 Arcobacter nitrofigilis DSM 7299 9172819 YP_003656792.1 CDS Arnit_2637 NC_014166.1 2650857 2651891 R COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR004276:IPR007235; KEGG: abu:Abu_1909 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: A8EW14 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyl transferase complement(2650857..2651891) Arcobacter nitrofigilis DSM 7299 9172820 YP_003656793.1 CDS Arnit_2638 NC_014166.1 2651888 2653090 R COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR018365:IPR001182; KEGG: abu:Abu_1910 penicillin-binding protein; PFAM: cell cycle protein; SPTR: A8EW15 Penicillin-binding protein; PFAM: Cell cycle protein; cell cycle protein complement(2651888..2653090) Arcobacter nitrofigilis DSM 7299 9172821 YP_003656794.1 CDS Arnit_2639 NC_014166.1 2653137 2654996 D COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR001460; KEGG: abu:Abu_1911 cell division protein FtsW; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: A8EW16 Cell division protein FtsW; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; peptidoglycan glycosyltransferase 2653137..2654996 Arcobacter nitrofigilis DSM 7299 9172822 YP_003656795.1 CDS Arnit_2640 NC_014166.1 2655057 2655572 D COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR015891; KEGG: abu:Abu_1912 peptidyl-prolyl cis-trans isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; SPTR: A8EW17 Peptidyl-prolyl cis-trans isomerase; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; cyclophilin type peptidyl-prolyl cis-trans isomerase 2655057..2655572 Arcobacter nitrofigilis DSM 7299 9172823 YP_003656796.1 CDS Arnit_2641 NC_014166.1 2655562 2656023 D KEGG: tdn:Suden_0150 hypothetical protein; SPTR: Q30UA0 Putative uncharacterized protein; hypothetical protein 2655562..2656023 Arcobacter nitrofigilis DSM 7299 9172824 YP_003656797.1 CDS Arnit_2642 NC_014166.1 2656033 2656263 D KEGG: dze:Dd1591_3146 transcriptional antiterminator, Rof; SPTR: B6XDL6 Putative uncharacterized protein; transcriptional antiterminator Rof 2656033..2656263 Arcobacter nitrofigilis DSM 7299 9172825 YP_003656798.1 CDS Arnit_2643 NC_014166.1 2662144 2662782 R KEGG: abu:Abu_2002 hypothetical protein; SPTR: A8EW96 Putative uncharacterized protein; hypothetical protein complement(2662144..2662782) Arcobacter nitrofigilis DSM 7299 9172831 YP_003656799.1 CDS Arnit_2644 NC_014166.1 2662760 2663959 R KEGG: abu:Abu_2003 hypothetical protein; SPTR: A8EW97 Conserved hypothetical membrane protein; hypothetical protein complement(2662760..2663959) Arcobacter nitrofigilis DSM 7299 9172832 YP_003656800.1 CDS Arnit_2645 NC_014166.1 2663959 2664528 R COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterProIPR017926:IPR006221:IPR000991:IPR006220:IPR 011702:IPR001317; KEGG: abu:Abu_2004 anthranilate synthase component II; PFAM: glutamine amidotransferase class-I; SPTR: A8EW98 Anthranilate synthase, component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; glutamine amidotransferase of anthranilate synthase complement(2663959..2664528) Arcobacter nitrofigilis DSM 7299 9172833 YP_003656801.1 CDS Arnit_2646 NC_014166.1 2664773 2665780 D COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: drm:Dred_1529 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Q1VSK1 Ferric iron uptake ABC transporter (FeT) family, substrate binding protein; PFAM: Bacterial extracellular solute-binding protein; family 1 extracellular solute-binding protein 2664773..2665780 Arcobacter nitrofigilis DSM 7299 9172834 YP_003656802.1 CDS Arnit_2647 NC_014166.1 2665798 2667375 D COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: pat:Patl_1597 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0N6P3 ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component 2665798..2667375 Arcobacter nitrofigilis DSM 7299 9172835 YP_003656803.1 CDS Arnit_2648 NC_014166.1 2667387 2668376 D COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR017871:IPR003593; KEGG: mae:Maeo_0335 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6UTV1 ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein 2667387..2668376 Arcobacter nitrofigilis DSM 7299 9172836 YP_003656804.1 CDS Arnit_2649 NC_014166.1 2668425 2669315 R InterPro IPR014966; KEGG: ckr:CKR_0031 hypothetical protein; PFAM: FRG domain protein; SPTR: C9QK67 Putative uncharacterized protein; PFAM: FRG domain; FRG domain-containing protein complement(2668425..2669315) Arcobacter nitrofigilis DSM 7299 9172837 YP_003656805.1 CDS Arnit_2650 NC_014166.1 2669531 2671342 R COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: abu:Abu_0317 carboxylyase-related protein; PFAM: Carboxylyase-related protein; SPTR: A8ERL8 Carboxylyase-related protein; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; UbiD family decarboxylase complement(2669531..2671342) Arcobacter nitrofigilis DSM 7299 9172838 YP_003656806.1 CDS Arnit_2651 NC_014166.1 2671428 2672576 D COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; InterPro IPR015421:IPR015424:IPR004839; KEGG: abu:Abu_0316 aminotransferase/L-cysteine desulfhydrase; PFAM: aminotransferase class I and II; SPTR: A8ERL7 Aminotransferase/L-cysteine desulfhydrase; PFAM: Aminotransferase class I and II; class I and II aminotransferase 2671428..2672576 Arcobacter nitrofigilis DSM 7299 9172839 YP_003656807.1 CDS Arnit_2652 NC_014166.1 2672709 2673071 D COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: abu:Abu_0315 NADH-quinone oxidoreductase, A subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: A8ERL6 NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 2672709..2673071 Arcobacter nitrofigilis DSM 7299 9172840 YP_003656808.1 CDS Arnit_2653 NC_014166.1 2673062 2673577 D COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006138:IPR006137; KEGG: abu:Abu_0314 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERL5 NADH-quinone oxidoreductase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH-quinone oxidoreductase subunit B 2673062..2673577 Arcobacter nitrofigilis DSM 7299 9172841 YP_003656809.1 CDS Arnit_2654 NC_014166.1 2673570 2675204 D COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR001268:IPR001135; KEGG: abu:Abu_0313 NADH-quinone oxidoreductase, C/D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: A8ERL4 NADH-quinone oxidoreductase subunit C/D; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; NADH-ubiquinone oxidoreductase subunit 49kDa 2673570..2675204 Arcobacter nitrofigilis DSM 7299 9172842 YP_003656810.1 CDS Arnit_2655 NC_014166.1 2675204 2675680 D COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336; KEGG: abu:Abu_0312 NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERL3 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH-quinone oxidoreductase subunit E 2675204..2675680 Arcobacter nitrofigilis DSM 7299 9172843 YP_003656811.1 CDS Arnit_2656 NC_014166.1 2675680 2676951 D COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR001949:IPR011538:IPR019554:IPR019575; KEGG: abu:Abu_0311 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERL2 NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NADH dehydrogenase 2675680..2676951 Arcobacter nitrofigilis DSM 7299 9172844 YP_003656812.1 CDS Arnit_2657 NC_014166.1 2676961 2678247 D COGs: COG0372 Citrate synthase; InterProIPR016142:IPR016141:IPR019810:IPR010953:IPR 002020; KEGG: abu:Abu_0310 citrate synthase; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: A8ERL1 Citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); citrate synthase I 2676961..2678247 Arcobacter nitrofigilis DSM 7299 9172845 YP_003656813.1 CDS Arnit_2658 NC_014166.1 2678282 2679718 D COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR017896:IPR000283:IPR019574; KEGG: abu:Abu_0309 NADH-quinone oxidoreductase, G subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; SPTR: A8ERL0 NADH-quinone oxidoreductase, G subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; NADH:ubiquinone oxidoreductase subunit G 2678282..2679718 Arcobacter nitrofigilis DSM 7299 9172846 YP_003656814.1 CDS Arnit_2659 NC_014166.1 2679715 2680998 D COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086:IPR001694; KEGG: abu:Abu_0308 NADH-quinone oxidoreductase, H subunit; PFAM: respiratory-chain NADH dehydrogenase subunit 1; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERK9 NADH-quinone oxidoreductase, H subunit; PFAM: NADH dehydrogenase; NADH dehydrogenase 2679715..2680998 Arcobacter nitrofigilis DSM 7299 9172847 YP_003656815.1 CDS Arnit_2660 NC_014166.1 2681000 2681512 D COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017896:IPR009051:IPR017900:IPR001450; KEGG: abu:Abu_0307 NADH-quinone oxidoreductase, I subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ERK8 NADH-quinone oxidoreductase, I subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; 4Fe-4S ferredoxin 2681000..2681512 Arcobacter nitrofigilis DSM 7299 9172848 YP_003656816.1 CDS Arnit_2661 NC_014166.1 2681505 2682020 D COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: abu:Abu_0306 NADH-quinone oxidoreductase, J subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: A8ERK7 NADH-quinone oxidoreductase, J subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 2681505..2682020 Arcobacter nitrofigilis DSM 7299 9172849 YP_003656817.1 CDS Arnit_2662 NC_014166.1 2682017 2682328 D COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: abu:Abu_0305 NADH-quinone oxidoreductase, K subunit; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: A8ERK6 NADH-quinone oxidoreductase, K subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 2682017..2682328 Arcobacter nitrofigilis DSM 7299 9172850 YP_003656818.1 CDS Arnit_2663 NC_014166.1 2682328 2684217 D COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003945:IPR001516:IPR001750:IPR003916:IPR 018393; KEGG: abu:Abu_0304 NADH-quinone oxidoreductase, L subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: A8ERK5 NADH-quinone oxidoreductase, L subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; proton-translocating NADH-quinone oxidoreductase subunit L 2682328..2684217 Arcobacter nitrofigilis DSM 7299 9172851 YP_003656819.1 CDS Arnit_2664 NC_014166.1 2684219 2685700 D COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227:IPR001750:IPR003918; KEGG: abu:Abu_0303 NADH-quinone oxidoreductase, M subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A8ERK4 NADH-quinone oxidoreductase, M subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit M 2684219..2685700 Arcobacter nitrofigilis DSM 7299 9172852 YP_003656820.1 CDS Arnit_2665 NC_014166.1 2685700 2687202 D COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096:IPR001750; KEGG: abu:Abu_0302 NADH-quinone oxidoreductase, N subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A8ERK3 NADH-quinone oxidoreductase, N subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N 2685700..2687202 Arcobacter nitrofigilis DSM 7299 9172853 YP_003656821.1 CDS Arnit_2666 NC_014166.1 2687440 2688231 D InterPro IPR004224:IPR018956; KEGG: abu:Abu_0301 fumarate reductase cytochrome b-556 subunit; PFAM: Fumarate reductase respiratory complex; SPTR: A8ERK2 Fumarate reductase, cytochrome b subunit; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; fumarate reductase respiratory complex protein 2687440..2688231 Arcobacter nitrofigilis DSM 7299 9172854 YP_003656822.1 CDS Arnit_2667 NC_014166.1 2688231 2690216 D COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR015939:IPR003952:IPR014006:IPR003953:IPR 004112; KEGG: abu:Abu_0300 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase; SPTR: A8ERK1 Fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunit 2688231..2690216 Arcobacter nitrofigilis DSM 7299 9172855 YP_003656823.1 CDS Arnit_2668 NC_014166.1 2690216 2690947 D COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041:IPR017896:IPR012675:IPR012285:IPR 009051:IPR006058:IPR017900:IPR004489; KEGG: abu:Abu_0299 fumarate reductase iron-sulfur subunit; SPTR: A8ERK0 Fumarate reductase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 2690216..2690947 Arcobacter nitrofigilis DSM 7299 9172856 YP_003656824.1 CDS Arnit_2669 NC_014166.1 2691103 2693439 D InterPro IPR001401; KEGG: abu:Abu_0298 ATP/GTP-binding protein; PFAM: Dynamin family protein; SPTR: A8ERJ9 Putative uncharacterized protein; PFAM: Dynamin family; dynamin family protein 2691103..2693439 Arcobacter nitrofigilis DSM 7299 9172857 YP_003656825.1 CDS Arnit_2670 NC_014166.1 2693436 2695451 D InterPro IPR001401; KEGG: abu:Abu_0297 ATP/GTP-binding protein; PFAM: Dynamin family protein; SPTR: A8ERJ8 Putative uncharacterized protein; PFAM: Dynamin family; dynamin family protein 2693436..2695451 Arcobacter nitrofigilis DSM 7299 9172858 YP_003656826.1 CDS Arnit_2671 NC_014166.1 2696381 2696893 D KEGG: tdn:Suden_1949 hypothetical protein; SPTR: Q30P58 Putative uncharacterized protein; hypothetical protein 2696381..2696893 Arcobacter nitrofigilis DSM 7299 9172867 YP_003656827.1 CDS Arnit_2672 NC_014166.1 2696890 2697249 D InterPro IPR015927:IPR019759; KEGG: vfi:VF_B0018 DNA-binding protein RdgA; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: B6BNE8 Putative repressor; PFAM: Peptidase S24-like; putative phage repressor 2696890..2697249 Arcobacter nitrofigilis DSM 7299 9172868 YP_003656828.1 CDS Arnit_2673 NC_014166.1 2697260 2697649 R KEGG: abu:Abu_0718 hypothetical protein; SPTR: A8ESQ9 Putative uncharacterized protein; hypothetical protein complement(2697260..2697649) Arcobacter nitrofigilis DSM 7299 9172869 YP_003656829.1 CDS Arnit_2674 NC_014166.1 2697907 2698356 D COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: abu:Abu_0717 ferric uptake regulation protein; PFAM: ferric-uptake regulator; SPTR: A8ESQ8 Ferric uptake regulation protein; PFAM: Ferric uptake regulator family; Fur family ferric uptake regulator 2697907..2698356 Arcobacter nitrofigilis DSM 7299 9172870 YP_003656830.1 CDS Arnit_2675 NC_014166.1 2698443 2698757 D KEGG: abu:Abu_0716 hypothetical protein; SPTR: A8ESQ7 Putative uncharacterized protein; hypothetical protein 2698443..2698757 Arcobacter nitrofigilis DSM 7299 9172871 YP_003656831.1 CDS Arnit_2676 NC_014166.1 2698758 2699435 D InterPro IPR009078; KEGG: abu:Abu_0715 hypothetical protein; SPTR: A8ESQ6 Putative uncharacterized protein; PFAM: Uncharacterized protein domain (DUF2202); hypothetical protein 2698758..2699435 Arcobacter nitrofigilis DSM 7299 9172872 YP_003656832.1 CDS Arnit_2677 NC_014166.1 2699439 2699660 D KEGG: abu:Abu_0714 hypothetical protein; SPTR: A8ESQ5 Putative uncharacterized protein; hypothetical protein 2699439..2699660 Arcobacter nitrofigilis DSM 7299 9172873 YP_003656833.1 CDS Arnit_2678 NC_014166.1 2699657 2700019 D KEGG: abu:Abu_0713 hypothetical protein; SPTR: A8ESQ4 Putative uncharacterized protein; hypothetical protein 2699657..2700019 Arcobacter nitrofigilis DSM 7299 9172874 YP_003656834.1 CDS Arnit_2679 NC_014166.1 2700012 2700353 D KEGG: abu:Abu_0712 hypothetical protein; SPTR: A8ESQ3 Putative uncharacterized protein; hypothetical protein 2700012..2700353 Arcobacter nitrofigilis DSM 7299 9172875 YP_003656835.1 CDS Arnit_2680 NC_014166.1 2700346 2702460 D COGs: COG2217 Cation transport ATPase; InterProIPR018303:IPR000150:IPR006416:IPR001757:IPR 008250:IPR005834:IPR000695; KEGG: abu:Abu_0711 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: A8ESQ2 Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase 2700346..2702460 Arcobacter nitrofigilis DSM 7299 9172876 YP_003656836.1 CDS Arnit_2681 NC_014166.1 2702536 2702655 D hypothetical protein 2702536..2702655 Arcobacter nitrofigilis DSM 7299 9172877 YP_003656837.1 CDS Arnit_2682 NC_014166.1 2702636 2702872 D KEGG: wsu:WS1569 hypothetical protein; SPTR: Q7MR91 Putative uncharacterized protein; hypothetical protein 2702636..2702872 Arcobacter nitrofigilis DSM 7299 9172878 YP_003656838.1 CDS Arnit_2683 NC_014166.1 2702869 2702994 R KEGG: fjo:Fjoh_4011 PAS/PAC sensor signal transduction histidine kinase; SPTR: B6FZV5 Putative uncharacterized protein; hypothetical protein complement(2702869..2702994) Arcobacter nitrofigilis DSM 7299 9172879 YP_003656839.1 CDS Arnit_2684 NC_014166.1 2703003 2703503 R COGs: COG0716 Flavodoxins; InterPro IPR008254:IPR001226:IPR010086:IPR001094; KEGG: abu:Abu_1769 flavodoxin; PFAM: flavodoxin/nitric oxide synthase; SPTR: A8EVP2 Flavodoxin; TIGRFAM: flavodoxin; PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain; flavodoxin complement(2703003..2703503) Arcobacter nitrofigilis DSM 7299 9172880 YP_003656840.1 CDS Arnit_2685 NC_014166.1 2703475 2703918 R KEGG: cjd:JJD26997_0267 hypothetical protein; SPTR: Q4HHK3 Putative uncharacterized protein; hypothetical protein complement(2703475..2703918) Arcobacter nitrofigilis DSM 7299 9172881 YP_003656841.1 CDS Arnit_2686 NC_014166.1 2704125 2705297 D COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterProIPR013816:IPR016102:IPR017866:IPR005809:IPR 013650:IPR005811; KEGG: lpn:lpg0534 succinyl CoA synthetase beta chain; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Q5ZY39 Succinyl CoA synthetase beta chain; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta 2704125..2705297 Arcobacter nitrofigilis DSM 7299 9172882 YP_003656842.1 CDS Arnit_2687 NC_014166.1 2705297 2706169 D COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterProIPR005810:IPR016040:IPR016102:IPR017440:IPR 003781:IPR005811; KEGG: kko:Kkor_1538 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; SPTR: A4BDN2 Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 2705297..2706169 Arcobacter nitrofigilis DSM 7299 9172883 YP_003656843.1 CDS Arnit_2688 NC_014166.1 2706183 2706917 D COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: sun:SUN_0232 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: A6Q6T3 Phytanoyl-CoA dioxygenase, PhyH family; PFAM: Phytanoyl-CoA dioxygenase (PhyH); phytanoyl-CoA dioxygenase 2706183..2706917 Arcobacter nitrofigilis DSM 7299 9172884 YP_003656844.1 CDS Arnit_2689 NC_014166.1 2706910 2709018 D COGs: COG2183 Transcriptional accessory protein; InterProIPR003029:IPR012340:IPR016027:IPR018974:IPR 006641; KEGG: abu:Abu_2017 S1 RNA-binding domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: A8EWB1 S1 RNA binding domain protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; Tex-like protein 2706910..2709018 Arcobacter nitrofigilis DSM 7299 9172885 YP_003656845.1 CDS Arnit_2690 NC_014166.1 2709345 2710211 D COGs: COG3384 conserved hypothetical protein; InterPro IPR014436:IPR004183:IPR006311; KEGG: chu:CHU_3641 hypothetical protein; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: Q11NY9 Putative uncharacterized protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B 2709345..2710211 Arcobacter nitrofigilis DSM 7299 9172886 YP_003656846.1 CDS Arnit_2691 NC_014166.1 2710215 2710589 R COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: rbi:RB2501_15054 4-hydroxybenzoyl-CoA thioesterase domain protein; PFAM: thioesterase superfamily protein; SPTR: A4CLA8 4-hydroxybenzoyl-CoA thioesterase domain protein; PFAM: Thioesterase superfamily; thioesterase superfamily protein complement(2710215..2710589) Arcobacter nitrofigilis DSM 7299 9172887 YP_003656847.1 CDS Arnit_2692 NC_014166.1 2710726 2711838 D InterPro IPR001296; KEGG: dtu:Dtur_0584 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B6BN14 Putative uncharacterized protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 2710726..2711838 Arcobacter nitrofigilis DSM 7299 9172888 YP_003656848.1 CDS Arnit_2693 NC_014166.1 2711860 2712687 R COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR011991:IPR005119; KEGG: abu:Abu_0849 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A8ET35 Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; LysR family transcriptional regulator complement(2711860..2712687) Arcobacter nitrofigilis DSM 7299 9172889 YP_003656849.1 CDS Arnit_2694 NC_014166.1 2712777 2713961 D InterPro IPR016196:IPR011701; KEGG: abu:Abu_0016 putative MFS permease; PFAM: major facilitator superfamily MFS_1; SPTR: A8EQU5 Putative uncharacterized protein; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 2712777..2713961 Arcobacter nitrofigilis DSM 7299 9172890 YP_003656850.1 CDS Arnit_2695 NC_014166.1 2714043 2714258 D COGs: COG1942 Uncharacterized protein 4-oxalocrotonate tautomerase homolog; InterPro IPR018191:IPR004370; KEGG: abu:Abu_0848 tautomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: A8ET34 Probable tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase 2714043..2714258 Arcobacter nitrofigilis DSM 7299 9172891 YP_003656851.1 CDS Arnit_2696 NC_014166.1 2714327 2714890 D COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007065; KEGG: abu:Abu_0269 hypothetical protein; PFAM: HPP family protein; SPTR: A8ERH0 Conserved hypothetical membrane protein, HPP family; PFAM: HPP family; HPP family protein 2714327..2714890 Arcobacter nitrofigilis DSM 7299 9172892 YP_003656852.1 CDS Arnit_2697 NC_014166.1 2714891 2715394 R COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796:IPR012259; KEGG: phe:Phep_1421 dihydrofolate reductase; PFAM: dihydrofolate reductase region; SPTR: C4BVC8 Dihydrofolate reductase; PFAM: Dihydrofolate reductase; dihydrofolate reductase subunit complement(2714891..2715394) Arcobacter nitrofigilis DSM 7299 9172893 YP_003656853.1 CDS Arnit_2698 NC_014166.1 2715545 2716408 R COGs: COG0207 Thymidylate synthase; InterPro IPR000398; KEGG: psa:PST_0414 thymidylate synthase; PFAM: thymidylate synthase; PRIAM: Thymidylate synthase; SPTR: C6P461 Thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; thymidylate synthase complement(2715545..2716408) Arcobacter nitrofigilis DSM 7299 9172894 YP_003656854.1 CDS Arnit_2699 NC_014166.1 2716494 2717111 R COGs: COG1279 Lysine efflux permease; InterPro IPR001123; KEGG: asu:Asuc_0217 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: C9PP62 LysE family transporter; PFAM: LysE type translocator; lysine exporter protein complement(2716494..2717111) Arcobacter nitrofigilis DSM 7299 9172895 YP_003656855.1 CDS Arnit_2700 NC_014166.1 2717111 2717740 R COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: nam:NAMH_0417 hypothetical protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: C1ZYU9 Putative uncharacterized protein; PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427; multiple antibiotic resistance (MarC)-like protein complement(2717111..2717740) Arcobacter nitrofigilis DSM 7299 9172896 YP_003656856.1 CDS Arnit_2701 NC_014166.1 2717741 2718706 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: wsu:WS0280 ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1ZYL8 Amino acid ABC transporter membrane protein, PAAT family; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit complement(2717741..2718706) Arcobacter nitrofigilis DSM 7299 9172897 YP_003656857.1 CDS Arnit_2702 NC_014166.1 2718710 2719525 R COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638:IPR001320; KEGG: nam:NAMH_0584 binding component of abc transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: C1ZYL7 Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3; family 3 extracellular solute-binding protein complement(2718710..2719525) Arcobacter nitrofigilis DSM 7299 9172898 YP_003656858.1 CDS Arnit_2703 NC_014166.1 2719539 2720276 R COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: nam:NAMH_0585 amino acid permease ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9L8P3 Amino acid permease ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(2719539..2720276) Arcobacter nitrofigilis DSM 7299 9172899 YP_003656859.1 CDS Arnit_2704 NC_014166.1 2720421 2721293 D InterPro IPR000620; KEGG: wsu:WS0276 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Q7MSN2 Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 2720421..2721293 Arcobacter nitrofigilis DSM 7299 9172900 YP_003656860.1 CDS Arnit_2705 NC_014166.1 2721359 2723155 D COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120:IPR014085; KEGG: pin:Ping_2417 amidase; PFAM: Amidase; SPTR: A1SXD4 Amidase; TIGRFAM: allophanate hydrolase; PFAM: Amidase; TIGRFAM: allophanate hydrolase; allophanate hydrolase 2721359..2723155 Arcobacter nitrofigilis DSM 7299 9172901 YP_003656861.1 CDS Arnit_2706 NC_014166.1 2723171 2724787 D COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR006311:IPR000914; KEGG: pin:Ping_2418 ABC transporter extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: A1SXD5 ABC transporter extracellular solute-binding protein, family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; family 5 extracellular solute-binding protein 2723171..2724787 Arcobacter nitrofigilis DSM 7299 9172902 YP_003656862.1 CDS Arnit_2707 NC_014166.1 2724784 2725806 D COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: rpb:RPB_4050 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B7RGM5 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component 2724784..2725806 Arcobacter nitrofigilis DSM 7299 9172903 YP_003656863.1 CDS Arnit_2708 NC_014166.1 2725815 2726660 D COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: rpb:RPB_4051 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B4WGC7 ABC transporter, permease protein, putative; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component 2725815..2726660 Arcobacter nitrofigilis DSM 7299 9172904 YP_003656864.1 CDS Arnit_2709 NC_014166.1 2726673 2728382 D COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR017871:IPR013563:IPR003593; KEGG: azc:AZC_1514 ABC transporter related protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: A8HXL2 ABC transporter related protein; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; ABC transporter-like protein 2726673..2728382 Arcobacter nitrofigilis DSM 7299 9172905 YP_003656865.1 CDS Arnit_2710 NC_014166.1 2728416 2729096 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR009081:IPR001789:IPR011006; KEGG: abu:Abu_1762 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EVN5 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator receiver protein 2728416..2729096 Arcobacter nitrofigilis DSM 7299 9172906 YP_003656866.1 CDS Arnit_2711 NC_014166.1 2729093 2730796 D COGs: COG3614 periplasmic ligand-binding sensor domain; InterPro IPR005467:IPR006189:IPR003594:IPR004358; KEGG: swd:Swoo_0798 diguanylate cyclase; PFAM: ATP-binding region ATPase domain protein; CHASE domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A9D0K7 Sensory transduction system, regulatory protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CHASE domain; multi-sensor signal transduction histidine kinase 2729093..2730796 Arcobacter nitrofigilis DSM 7299 9172907 YP_003656867.1 CDS Arnit_2712 NC_014166.1 2730941 2733049 R COGs: COG0514 Superfamily II DNA helicase; InterProIPR002121:IPR014021:IPR001650:IPR010997:IPR 006293:IPR018329:IPR011545:IPR018982:IPR014001; KEGG: sun:SUN_2266 ATP-dependent DNA helicase RecQ; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; SPTR: B6BJR4 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ complement(2730941..2733049) Arcobacter nitrofigilis DSM 7299 9172908 YP_003656868.1 CDS Arnit_2713 NC_014166.1 2733159 2733752 D COGs: COG4106 Trans-aconitate methyltransferase; InterPro IPR013216; KEGG: mmw:Mmwyl1_2522 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: A6VYB2 Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase 2733159..2733752 Arcobacter nitrofigilis DSM 7299 9172909 YP_003656869.1 CDS Arnit_2714 NC_014166.1 2734366 2735412 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: lsp:Bsph_1996 response regulator receiver domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q2BIA8 Diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2734366..2735412) Arcobacter nitrofigilis DSM 7299 9172910 YP_003656870.1 CDS Arnit_2715 NC_014166.1 2735558 2736091 R COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: cpi:Cpin_4080 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: C7PE40 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(2735558..2736091) Arcobacter nitrofigilis DSM 7299 9172911 YP_003656871.1 CDS Arnit_2716 NC_014166.1 2736088 2736441 R COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abu:Abu_1057 hypothetical protein; PFAM: helix-turn-helix HxlR type; SPTR: A8ETP3 Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix; HxlR family transcriptional regulator complement(2736088..2736441) Arcobacter nitrofigilis DSM 7299 9172912 YP_003656872.1 CDS Arnit_2717 NC_014166.1 2736503 2737330 R COGs: COG3449 DNA gyrase inhibitor; InterProIPR018060:IPR012287:IPR011256:IPR009057:IPR 000005:IPR010499:IPR020449; KEGG: gur:Gura_3503 transcription activator, effector binding; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A5G790 Transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(2736503..2737330) Arcobacter nitrofigilis DSM 7299 9172913 YP_003656873.1 CDS Arnit_2718 NC_014166.1 2737523 2738443 R COGs: COG0385 Na+-dependent transporter; InterPro IPR004684:IPR002657; KEGG: wsu:WS0141 putative Na+-dependent transporter; PFAM: Bile acid:sodium symporter; SPTR: C2A1V5 Predicted Na+-dependent transporter; PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; bile acid:sodium symporter complement(2737523..2738443) Arcobacter nitrofigilis DSM 7299 9172914 YP_003656874.1 CDS Arnit_2719 NC_014166.1 2738530 2739441 R COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: wsu:WS0141 putative Na+-dependent transporter; PFAM: Bile acid:sodium symporter; SPTR: C2A1V5 Predicted Na+-dependent transporter; PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; bile acid:sodium symporter complement(2738530..2739441) Arcobacter nitrofigilis DSM 7299 9172915 YP_003656875.1 CDS Arnit_2720 NC_014166.1 2739487 2740119 R COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR017945:IPR000422; KEGG: abu:Abu_1131 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; SPTR: C1ZY53 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2739487..2740119) Arcobacter nitrofigilis DSM 7299 9172916 YP_003656876.1 CDS Arnit_2721 NC_014166.1 2740399 2740944 R COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868:IPR003006; KEGG: bcg:BCG9842_B0018 isochorismatase family protein; PFAM: isochorismatase hydrolase; SPTR: C2YYT7 Isochorismatase; PFAM: Isochorismatase family; isochorismatase hydrolase complement(2740399..2740944) Arcobacter nitrofigilis DSM 7299 9172917 YP_003656877.1 CDS Arnit_2722 NC_014166.1 2740955 2741884 R COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006139:IPR006140; KEGG: abu:Abu_0274 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: A8ERH5 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(2740955..2741884) Arcobacter nitrofigilis DSM 7299 9172918 YP_003656878.1 CDS Arnit_2723 NC_014166.1 2741881 2742756 R InterPro IPR000620; KEGG: cps:CPS_4003 membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Q47X10 Membrane protein; PFAM: EamA-like transporter family; hypothetical protein complement(2741881..2742756) Arcobacter nitrofigilis DSM 7299 9172919 YP_003656879.1 CDS Arnit_2724 NC_014166.1 2742759 2743652 R InterPro IPR000620; KEGG: cps:CPS_4003 membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Q47X10 Membrane protein; PFAM: EamA-like transporter family; hypothetical protein complement(2742759..2743652) Arcobacter nitrofigilis DSM 7299 9172920 YP_003656880.1 CDS Arnit_2725 NC_014166.1 2743725 2744291 R COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: abu:Abu_1145 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8ETY1 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator complement(2743725..2744291) Arcobacter nitrofigilis DSM 7299 9172921 YP_003656881.1 CDS Arnit_2726 NC_014166.1 2744293 2745270 R KEGG: abu:Abu_0275 hypothetical protein; SPTR: A8ERH6 Putative uncharacterized protein; hypothetical protein complement(2744293..2745270) Arcobacter nitrofigilis DSM 7299 9172922 YP_003656882.1 CDS Arnit_2727 NC_014166.1 2745447 2746331 D COGs: COG2513 PEP phosphonomutase; InterPro IPR018523:IPR012695:IPR015813:IPR000918; KEGG: abu:Abu_0276 2-methylisocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: A8ERH7 Carboxyphosphoenolpyruvate phosphomutase PrpB; TIGRFAM: methylisocitrate lyase; PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase; methylisocitrate lyase 2745447..2746331 Arcobacter nitrofigilis DSM 7299 9172923 YP_003656883.1 CDS Arnit_2728 NC_014166.1 2746380 2747528 D COGs: COG0372 Citrate synthase; InterProIPR019810:IPR011278:IPR002020:IPR016142:IPR 016141; KEGG: abu:Abu_0277 methylcitrate synthase; PFAM: Citrate synthase; PRIAM: 2-methylcitrate synthase; SPTR: A8ERH8 2-methylcitrate synthase/citrate synthase 2; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; 2-methylcitrate synthase/citrate synthase II 2746380..2747528 Arcobacter nitrofigilis DSM 7299 9172924 YP_003656884.1 CDS Arnit_2729 NC_014166.1 2747620 2750214 D COGs: COG1048 Aconitase A; InterProIPR012708:IPR001030:IPR015931:IPR015932:IPR 015928:IPR000573; KEGG: abu:Abu_0278 aconitate hydratase; PFAM: aconitate hydratase domain protein; SPTR: A8ERH9 Aconitate hydratase 1; TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; aconitate hydratase 1; 2-methylisocitrate dehydratase 2747620..2750214 Arcobacter nitrofigilis DSM 7299 9172925 YP_003656885.1 CDS Arnit_2730 NC_014166.1 2750320 2751498 D COGs: COG2828 conserved hypothetical protein; InterPro IPR012709:IPR007400; KEGG: abu:Abu_0279 hypothetical protein; PFAM: protein of unknown function DUF453; SPTR: A8ERI0 Putative uncharacterized protein; TIGRFAM: AcnD-accessory protein PrpF; PFAM: PrpF protein; TIGRFAM: probable AcnD-accessory protein PrpF; AcnD-accessory protein PrpF 2750320..2751498 Arcobacter nitrofigilis DSM 7299 9172926 YP_003656886.1 CDS Arnit_2731 NC_014166.1 2751601 2752251 D COGs: COG0692 Uracil DNA glycosylase; InterPro IPR018085:IPR002043:IPR005122; KEGG: abu:Abu_2147 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: A8EWN8 Uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; uracil-DNA glycosylase 2751601..2752251 Arcobacter nitrofigilis DSM 7299 9172927 YP_003656887.1 CDS Arnit_2732 NC_014166.1 2752272 2752814 R InterPro IPR000868; KEGG: abu:Abu_0281 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: A8ERI2 Isochorismatase hydrolase; PFAM: Isochorismatase family; isochorismatase hydrolase complement(2752272..2752814) Arcobacter nitrofigilis DSM 7299 9172928 YP_003656888.1 CDS Arnit_2733 NC_014166.1 2752892 2753830 R COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: abu:Abu_0283 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; PRIAM: Hydroxymethylbilane synthase; SPTR: A8ERI4 Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; porphobilinogen deaminase complement(2752892..2753830) Arcobacter nitrofigilis DSM 7299 9172929 YP_003656889.1 CDS Arnit_2734 NC_014166.1 2753830 2754672 R COGs: COG1651 Protein-disulfide isomerase; InterProIPR011767:IPR012335:IPR012336:IPR017936:IPR 001853; KEGG: abu:Abu_0284 putative DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: A8ERI5 Putative uncharacterized protein; PFAM: DSBA-like thioredoxin domain; DsbA oxidoreductase complement(2753830..2754672) Arcobacter nitrofigilis DSM 7299 9172930 YP_003656890.1 CDS Arnit_2735 NC_014166.1 2754688 2756511 R COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR012763:IPR003593:IPR003959; KEGG: abu:Abu_0285 DNA polymerase III, gamma and tau subunits; PFAM: AAA ATPase central domain protein; PRIAM: DNA-directed DNA polymerase; SMART: AAA ATPase; SPTR: A8ERI6 DNA polymerase III, gamma and tau subunits; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, subunits gamma and tau; DNA polymerase III subunits gamma and tau complement(2754688..2756511) Arcobacter nitrofigilis DSM 7299 9172931 YP_003656891.1 CDS Arnit_2736 NC_014166.1 2756504 2757304 R COGs: COG0796 Glutamate racemase; InterPro IPR018187:IPR004391:IPR001920:IPR015942; KEGG: abu:Abu_0286 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: A8ERI7 Glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; glutamate racemase complement(2756504..2757304) Arcobacter nitrofigilis DSM 7299 9172932 YP_003656892.1 CDS Arnit_2737 NC_014166.1 2757410 2759287 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR004358:IPR003594:IPR009082:IPR 005467:IPR003661:IPR013655; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: A8EV12 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase 2757410..2759287 Arcobacter nitrofigilis DSM 7299 9172933 YP_003656893.1 CDS Arnit_2738 NC_014166.1 2759326 2760132 R COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004872; KEGG: cby:CLM_1246 lipoprotein, NlpA family; PFAM: NLPA lipoprotein; SPTR: C1FK41 Lipoprotein, NLPA family; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; NLPA lipoprotein complement(2759326..2760132) Arcobacter nitrofigilis DSM 7299 9172934 YP_003656894.1 CDS Arnit_2739 NC_014166.1 2760152 2760790 R COGs: COG2011 ABC-type metal ion transport system permease component; InterPro IPR000515; KEGG: wsu:WS1944 ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q7M815 ABC TRANSPORTER PERMEASE COMPONENT; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(2760152..2760790) Arcobacter nitrofigilis DSM 7299 9172935 YP_003656895.1 CDS Arnit_2740 NC_014166.1 2760790 2761746 R COGs: COG1135 ABC-type metal ion transport system ATPase component; InterProIPR017871:IPR003439:IPR017908:IPR003593:IPR 018449; KEGG: cco:CCC13826_1250 methionine import ATP-binding protein MetN; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; SPTR: C6RFD9 Methionine import ATP-binding protein MetN; PFAM: ABC transporter; NIL domain; ABC transporter-like protein complement(2760790..2761746) Arcobacter nitrofigilis DSM 7299 9172936 YP_003656896.1 CDS Arnit_2741 NC_014166.1 2761870 2762526 D InterPro IPR005122; KEGG: gfo:GFO_2677 hypothetical protein; SPTR: A9E1L4 Putative uncharacterized protein; hypothetical protein 2761870..2762526 Arcobacter nitrofigilis DSM 7299 9172937 YP_003656897.1 CDS Arnit_2742 NC_014166.1 2762527 2763105 R KEGG: hor:Hore_09190 ATP-cone domain protein; SPTR: B8CWK6 Transcriptional repressor nrdR; hypothetical protein complement(2762527..2763105) Arcobacter nitrofigilis DSM 7299 9172938 YP_003656898.1 CDS Arnit_2743 NC_014166.1 2763430 2766564 R COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR018228:IPR014021:IPR001650:IPR014001:IPR 006935; KEGG: sbm:Shew185_0360 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A3HSL7 Helicase; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427); type III restriction protein res subunit complement(2763430..2766564) Arcobacter nitrofigilis DSM 7299 9172939 YP_003656899.1 CDS Arnit_2744 NC_014166.1 2766573 2766749 R KEGG: similar to AGAP005608-PA; hypothetical protein complement(2766573..2766749) Arcobacter nitrofigilis DSM 7299 9172940 YP_003656900.1 CDS Arnit_2745 NC_014166.1 2766963 2768306 R COGs: COG1158 Transcription termination factor; InterProIPR004665:IPR016027:IPR011112:IPR011129:IPR 003593:IPR011113:IPR000194; KEGG: abu:Abu_0288 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: Cold shock protein; AAA ATPase; SPTR: A8ERI9 Transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho complement(2766963..2768306) Arcobacter nitrofigilis DSM 7299 9172941 YP_003656901.1 CDS Arnit_2746 NC_014166.1 2768483 2769079 R COGs: COG0450 Peroxiredoxin; InterProIPR012335:IPR012336:IPR017936:IPR000866:IPR 019479; KEGG: abu:Abu_1879 alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; SPTR: A8ERJ0 Alkyl hydroperoxide reductase/ Thiol specific antioxidant; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(2768483..2769079) Arcobacter nitrofigilis DSM 7299 9172942 YP_003656902.1 CDS Arnit_2747 NC_014166.1 2769525 2769785 D InterPro IPR017900:IPR017896:IPR001450; KEGG: abu:Abu_0290 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ERJ1 Ferredoxin; 4Fe-4S ferredoxin 2769525..2769785 Arcobacter nitrofigilis DSM 7299 9172943 YP_003656903.1 CDS Arnit_2748 NC_014166.1 2769898 2770311 D COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: abu:Abu_0291 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: A8ERJ2 Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase; nucleoside-diphosphate kinase 2769898..2770311 Arcobacter nitrofigilis DSM 7299 9172944 YP_003656904.1 CDS Arnit_2749 NC_014166.1 2770321 2770701 D KEGG: abu:Abu_0292 hypothetical protein; SPTR: A8ERJ3 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399; hypothetical protein 2770321..2770701 Arcobacter nitrofigilis DSM 7299 9172945 YP_003656905.1 CDS Arnit_2750 NC_014166.1 2770714 2770866 D InterPro IPR002677; KEGG: abu:Abu_0293 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: A8ERJ4 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 2770714..2770866 Arcobacter nitrofigilis DSM 7299 9172946 YP_003656906.1 CDS Arnit_2751 NC_014166.1 2770866 2771867 D COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR012281:IPR003664; KEGG: abu:Abu_0294 putative glycerol-3-phosphate acyltransferase PlsX; PFAM: fatty acid synthesis plsX protein; SPTR: A8ERJ5 Fatty acid/phospholipid synthesis protein plsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX 2770866..2771867 Arcobacter nitrofigilis DSM 7299 9172947 YP_003656907.1 CDS Arnit_2752 NC_014166.1 2771877 2772875 D COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterProIPR004655:IPR016038:IPR016039:IPR013751:IPR 013747; KEGG: abu:Abu_0295 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: A8ERJ6 3-oxoacyl-[acyl-carrier-protein] synthase 3; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2771877..2772875 Arcobacter nitrofigilis DSM 7299 9172948 YP_003656908.1 CDS Arnit_2753 NC_014166.1 2772916 2773359 R KEGG: abu:Abu_0296 hypothetical protein; SPTR: A8ERJ7 Putative uncharacterized protein; hypothetical protein complement(2772916..2773359) Arcobacter nitrofigilis DSM 7299 9172949 YP_003656909.1 CDS Arnit_2754 NC_014166.1 2773403 2774041 D COGs: COG3672 periplasmic protein; InterPro IPR018120; KEGG: abu:Abu_2198 hypothetical protein; SPTR: A8EWT9 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF920); hypothetical protein 2773403..2774041 Arcobacter nitrofigilis DSM 7299 9172950 YP_003656910.1 CDS Arnit_2755 NC_014166.1 2774064 2775098 R KEGG: cju:C8J_0062 hypothetical protein; SPTR: A3IB47 Putative uncharacterized protein; PFAM: Prokaryotic glutathione synthetase, ATP-grasp domain; hypothetical protein complement(2774064..2775098) Arcobacter nitrofigilis DSM 7299 9172951 YP_003656911.1 CDS Arnit_2756 NC_014166.1 2775169 2775732 R InterPro IPR001544; KEGG: abu:Abu_0265 hypothetical protein; SPTR: A8ERG6 Putative uncharacterized protein; PFAM: Aminotransferase class IV; hypothetical protein complement(2775169..2775732) Arcobacter nitrofigilis DSM 7299 9172952 YP_003656912.1 CDS Arnit_2757 NC_014166.1 2775823 2777994 D COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterProIPR000014:IPR004358:IPR003594:IPR009082:IPR 005467:IPR000700:IPR013767; KEGG: abu:Abu_0035 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: C2A390 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor signal transduction histidine kinase 2775823..2777994 Arcobacter nitrofigilis DSM 7299 9172953 YP_003656913.1 CDS Arnit_2758 NC_014166.1 2777996 2778643 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011991:IPR011006:IPR001789:IPR001867; KEGG: wsu:WS0657 two component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C2A391 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 2777996..2778643 Arcobacter nitrofigilis DSM 7299 9172954 YP_003656914.1 CDS Arnit_2759 NC_014166.1 2778640 2779530 R COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999:IPR005801:IPR015890; KEGG: abu:Abu_0262 para-aminobenzoate synthase component I; PFAM: Chorismate binding-like; SPTR: A8ERG3 Para-aminobenzoate synthase, glutamine amidotransferase component I; PFAM: chorismate binding enzyme; chorismate binding protein complement(2778640..2779530) Arcobacter nitrofigilis DSM 7299 9172955 YP_003656915.1 CDS Arnit_2760 NC_014166.1 2779604 2780485 R COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006130:IPR002082:IPR006132:IPR006131; KEGG: abu:Abu_0261 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: A8ERG2 Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(2779604..2780485) Arcobacter nitrofigilis DSM 7299 9172956 YP_003656916.1 CDS Arnit_2761 NC_014166.1 2780574 2782901 D InterPro IPR010706; KEGG: abu:Abu_0260 fatty acid cis/trans isomerase; PFAM: fatty acid cistrans isomerase; SPTR: A8ERG1 Fatty acid cis/trans isomerase; PFAM: Fatty acid cis/trans isomerase (CTI); fatty acid cistrans isomerase 2780574..2782901 Arcobacter nitrofigilis DSM 7299 9172957 YP_003656917.1 CDS Arnit_2762 NC_014166.1 2782949 2784130 D COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814:IPR015421:IPR015424; KEGG: abu:Abu_0259 acetylornithine aminotransferase; PFAM: aminotransferase class-III; SPTR: A8ERG0 N-acetylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; class III aminotransferase 2782949..2784130 Arcobacter nitrofigilis DSM 7299 9172958 YP_003656918.1 CDS Arnit_2763 NC_014166.1 2784111 2785304 D KEGG: tdn:Suden_1253 hypothetical protein; SPTR: Q30R50 Putative uncharacterized protein; PFAM: Outer membrane efflux protein; hypothetical protein 2784111..2785304 Arcobacter nitrofigilis DSM 7299 9172959 YP_003656919.1 CDS Arnit_2764 NC_014166.1 2785417 2786112 R InterProIPR011990:IPR019734:IPR013026:IPR006597:IPR 001440; KEGG: aas:Aasi_0892 hypothetical protein; PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide repeat; SPTR: B3ESQ7 Putative uncharacterized protein; PFAM: Sel1 repeat; Tetratricopeptide repeat; hypothetical protein complement(2785417..2786112) Arcobacter nitrofigilis DSM 7299 9172960 YP_003656920.1 CDS Arnit_2765 NC_014166.1 2786105 2790067 R KEGG: hypothetical protein; SPTR: Q8I5Y2 Conserved Plasmodium protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; hypothetical protein complement(2786105..2790067) Arcobacter nitrofigilis DSM 7299 9172961 YP_003656921.1 CDS Arnit_2766 NC_014166.1 2790198 2791649 R COGs: COG0469 Pyruvate kinase; InterProIPR001697:IPR015793:IPR015813:IPR015794:IPR 015795:IPR011037; KEGG: abu:Abu_0258 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: A8ERF9 Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase complement(2790198..2791649) Arcobacter nitrofigilis DSM 7299 9172962 YP_003656922.1 CDS Arnit_2767 NC_014166.1 2791886 2793139 R KEGG: shm:Shewmr7_2228 hypothetical protein; SPTR: Q0HUI9 Putative uncharacterized protein; hypothetical protein complement(2791886..2793139) Arcobacter nitrofigilis DSM 7299 9172963 YP_003656923.1 CDS Arnit_2768 NC_014166.1 2793190 2793825 R COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR011031:IPR005126; KEGG: cco:CCC13826_1831 NapC/NirT cytochrome c family, N-region; PFAM: NapC/NirT cytochrome c domain protein; SPTR: C2A1Q1 Nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region; NapC/NirT cytochrome c domain-containing protein complement(2793190..2793825) Arcobacter nitrofigilis DSM 7299 9172964 YP_003656924.1 CDS Arnit_2769 NC_014166.1 2793822 2794283 R InterPro IPR012286:IPR011031; KEGG: cco:CCC13826_1830 flavocytochrome c heme subunit; SPTR: C2A1Q0 Putative uncharacterized protein; flavocytochrome c heme subunit complement(2793822..2794283) Arcobacter nitrofigilis DSM 7299 9172965 YP_003656925.1 CDS Arnit_2770 NC_014166.1 2794286 2795824 R COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR006311:IPR010960:IPR017909:IPR019546:IPR 003953; KEGG: cco:CCC13826_1803 FAD binding domain-containing protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Twin-arginine translocation pathway, signal sequence, subgroup; PRIAM: Succinate dehydrogenase; SPTR: C2A1P9 Flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: FAD binding domain; TIGRFAM: flavocytochrome c; flavocytochrome c complement(2794286..2795824) Arcobacter nitrofigilis DSM 7299 9172966 YP_003656926.1 CDS Arnit_2771 NC_014166.1 2795934 2796641 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR016032:IPR001789; KEGG: cff:CFF8240_0140 two component transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C2A1P8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator receiver protein complement(2795934..2796641) Arcobacter nitrofigilis DSM 7299 9172967 YP_003656927.1 CDS Arnit_2772 NC_014166.1 2796634 2798628 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR009082:IPR005467:IPR004010; KEGG: ccv:CCV52592_0849 putative two component sensor kinase; PFAM: ATP-binding region ATPase domain protein; Cache domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C2A1P7 PAS domain S-box protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; cache sensor signal transduction histidine kinase complement(2796634..2798628) Arcobacter nitrofigilis DSM 7299 9172968 YP_003656928.1 CDS Arnit_2773 NC_014166.1 2798814 2799581 D KEGG: ckr:CKR_0657 hypothetical protein; SPTR: B9DZN3 Putative uncharacterized protein; hypothetical protein 2798814..2799581 Arcobacter nitrofigilis DSM 7299 9172969 YP_003656929.1 CDS Arnit_2774 NC_014166.1 2799612 2800622 D COGs: COG1565 conserved hypothetical protein; InterPro IPR003788; KEGG: nis:NIS_1063 hypothetical protein; PFAM: protein of unknown function DUF185; SPTR: B6BN85 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1565; hypothetical protein 2799612..2800622 Arcobacter nitrofigilis DSM 7299 9172970 YP_003656930.1 CDS Arnit_2775 NC_014166.1 2800633 2801010 R COGs: COG3564 conserved hypothetical protein; InterPro IPR008497; KEGG: abu:Abu_0379 hypothetical protein; PFAM: protein of unknown function DUF779; SPTR: A8ERT0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF779); hypothetical protein complement(2800633..2801010) Arcobacter nitrofigilis DSM 7299 9172971 YP_003656931.1 CDS Arnit_2776 NC_014166.1 2801199 2802695 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR016162:IPR016161:IPR015590; KEGG: abu:Abu_0378 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; PRIAM: Aldehyde dehydrogenase (NAD(+)); SPTR: A8ERS9 Aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(2801199..2802695) Arcobacter nitrofigilis DSM 7299 9172972 YP_003656932.1 CDS Arnit_2777 NC_014166.1 2802918 2804807 D COGs: COG3287 conserved hypothetical protein; InterProIPR003594:IPR009082:IPR005467:IPR003661:IPR 013702:IPR019494; KEGG: wsu:WS0901 GGDEF family protein; PFAM: domain of unknown function DUF1745; FIST C domain; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C2A1T3 Sensor protein; PFAM: FIST C domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; FIST N domain; histidine kinase 2802918..2804807 Arcobacter nitrofigilis DSM 7299 9172973 YP_003656933.1 CDS Arnit_2778 NC_014166.1 2804804 2805463 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: wsu:WS0900 putative two-component regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: Q7M9I3 PUTATIVE TWO-COMPONENT REGULATOR; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 2804804..2805463 Arcobacter nitrofigilis DSM 7299 9172974 YP_003656934.1 CDS Arnit_2779 NC_014166.1 2805595 2807046 D COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR005479:IPR013817:IPR013816:IPR011054:IPR 016185:IPR011761:IPR011764:IPR005481:IPR005482; KEGG: abu:Abu_0605 acetyl CoA carboxylase, biotin carboxylase subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: A8ESE6 Acetyl CoA carboxylase, biotin carboxylase subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; carbamoyl-phosphate synthase L chain ATP-binding protein 2805595..2807046 Arcobacter nitrofigilis DSM 7299 9172975 YP_003656935.1 CDS Arnit_2780 NC_014166.1 2807061 2808167 R COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017200:IPR011843:IPR007197; KEGG: mca:MCA1449 pyrroloquinoline quinone biosynthesis protein PqqE; PFAM: Radical SAM domain protein; SPTR: Q608P0 Coenzyme PQQ synthesis protein E; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis protein E; coenzyme PQQ biosynthesis protein E complement(2807061..2808167) Arcobacter nitrofigilis DSM 7299 9172976 YP_003656936.1 CDS Arnit_2781 NC_014166.1 2808157 2808426 R InterPro IPR008792; KEGG: swd:Swoo_2250 pyrroloquinoline quinone biosynthesis protein PqqD; PFAM: coenzyme PQQ synthesis D; SPTR: B1KEF3 Coenzyme PQQ synthesis D; PFAM: Coenzyme PQQ synthesis protein D (PqqD); coenzyme PQQ synthesis D complement(2808157..2808426) Arcobacter nitrofigilis DSM 7299 9172977 YP_003656937.1 CDS Arnit_2782 NC_014166.1 2808395 2809150 R COGs: COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; InterPro IPR011845:IPR016084:IPR004305; KEGG: bgl:bglu_2g22320 coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4 domain protein; PRIAM: Pyrroloquinoline-quinone synthase; SPTR: C5AL13 Coenzyme PQQ biosynthesis protein C; TIGRFAM: coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C; coenzyme PQQ biosynthesis protein C complement(2808395..2809150) Arcobacter nitrofigilis DSM 7299 9172978 YP_003656938.1 CDS Arnit_2783 NC_014166.1 2809163 2809459 R COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: abu:Abu_1059 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: A8ETP5 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(2809163..2809459) Arcobacter nitrofigilis DSM 7299 9172979 YP_003656939.1 CDS Arnit_2784 NC_014166.1 2809486 2810400 R COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR011842; KEGG: psa:PST_2073 pyrroloquinoline quinone biosynthesis protein PqqB; SPTR: Q2BNP6 Coenzyme PQQ synthesis protein B; TIGRFAM: coenzyme PQQ biosynthesis protein B; TIGRFAM: coenzyme PQQ biosynthesis protein B; coenzyme PQQ biosynthesis protein B complement(2809486..2810400) Arcobacter nitrofigilis DSM 7299 9172980 YP_003656940.1 CDS Arnit_2785 NC_014166.1 2810609 2812402 R COGs: COG4993 Glucose dehydrogenase; InterProIPR001479:IPR017512:IPR011047:IPR018391:IPR 019551:IPR002372:IPR019556; KEGG: pat:Patl_1855 pyrrolo-quinoline quinone; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Q15UR3 Pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PQQ-dependent dehydrogenase complement(2810609..2812402) Arcobacter nitrofigilis DSM 7299 9172981 YP_003656941.1 CDS Arnit_2786 NC_014166.1 2812480 2813262 R InterPro IPR013526:IPR000412:IPR013525; KEGG: pmy:Pmen_1945 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: A4XTP0 ABC-2 type transporter; PFAM: ABC-2 type transporter; ABC transporter complement(2812480..2813262) Arcobacter nitrofigilis DSM 7299 9172982 YP_003656942.1 CDS Arnit_2787 NC_014166.1 2813266 2813988 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: swd:Swoo_2260 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2BNR3 ABC efflux transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(2813266..2813988) Arcobacter nitrofigilis DSM 7299 9172983 YP_003656943.1 CDS Arnit_2788 NC_014166.1 2813993 2814949 R COGs: COG3391 conserved hypothetical protein; InterPro IPR011964:IPR015943:IPR011048; KEGG: psa:PST_2283 outer membrane protein, putative; SPTR: Q2BNR4 YVTN beta-propeller repeat family protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat; 40-residue YVTN family beta-propeller repeat-containing protein complement(2813993..2814949) Arcobacter nitrofigilis DSM 7299 9172984 YP_003656944.1 CDS Arnit_2789 NC_014166.1 2815078 2816226 D KEGG: swd:Swoo_2258 hypothetical protein; SPTR: Q2BNR5 Putative uncharacterized protein; hypothetical protein 2815078..2816226 Arcobacter nitrofigilis DSM 7299 9172985 YP_003656945.1 CDS Arnit_2790 NC_014166.1 2816226 2816684 D InterPro IPR005180; KEGG: hypothetical protein; SPTR: B5ISA8 Conserved domain protein; hypothetical protein 2816226..2816684 Arcobacter nitrofigilis DSM 7299 9172986 YP_003656946.1 CDS Arnit_2791 NC_014166.1 2816783 2817520 D InterPro IPR010156:IPR002743; KEGG: cbb:CLD_2401 CRISPR-associated Cas family protein; PFAM: protein of unknown function DUF57; SPTR: B1IGS6 CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; CRISPR-associated protein Cas6 2816783..2817520 Arcobacter nitrofigilis DSM 7299 9172987 YP_003656947.1 CDS Arnit_2792 NC_014166.1 2817511 2819247 D KEGG: hypothetical protein; SPTR: C2A1U7 Putative uncharacterized protein; hypothetical protein 2817511..2819247 Arcobacter nitrofigilis DSM 7299 9172988 YP_003656948.1 CDS Arnit_2793 NC_014166.1 2819257 2820180 D COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010154:IPR013414; KEGG: cth:Cthe_2301 CRISPR-associated autoregulator DevR family protein protein; SPTR: C2A1U6 CRISPR-associated regulatory protein, DevR family; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; PFAM: CRISPR-associated negative autoregulator DevR/Csa2; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; DevR family CRISPR-associated autoregulator 2819257..2820180 Arcobacter nitrofigilis DSM 7299 9172989 YP_003656949.1 CDS Arnit_2794 NC_014166.1 2820180 2820899 D InterPro IPR013422:IPR007552; KEGG: dtu:Dtur_0622 CRISPR-associated protein Cas5, Hmari subtype; PFAM: protein of unknown function DUF522; SPTR: C2A1U5 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein Cas5 2820180..2820899 Arcobacter nitrofigilis DSM 7299 9172990 YP_003656950.1 CDS Arnit_2795 NC_014166.1 2820899 2823115 D COGs: COG1203 helicase; InterProIPR002464:IPR006483:IPR006474:IPR014021:IPR 001650:IPR014001:IPR011545; KEGG: mfe:Mefer_1440 CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; SPTR: C2A1U4 CRISPR-associated helicase Cas3/CRISPR-associated HD domain protein; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; CRISPR-associated helicase Cas3 2820899..2823115 Arcobacter nitrofigilis DSM 7299 9172991 YP_003656951.1 CDS Arnit_2796 NC_014166.1 2823127 2823939 D KEGG: fps:FP0483 hypothetical protein; SPTR: A6GWW6 Putative uncharacterized protein; hypothetical protein 2823127..2823939 Arcobacter nitrofigilis DSM 7299 9172992 YP_003656952.1 CDS Arnit_2797 NC_014166.1 2823936 2824430 D COGs: COG1468 RecB family exonuclease; InterPro IPR013343; KEGG: ckr:CKR_2446 hypothetical protein; PFAM: CRISPR-associated protein Cas4; SPTR: C2A1U3 CRISPR-associated exonuclease, Cas4 family; TIGRFAM: CRISPR-associated protein Cas4; PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated protein Cas4 2823936..2824430 Arcobacter nitrofigilis DSM 7299 9172993 YP_003656953.1 CDS Arnit_2798 NC_014166.1 2824443 2825447 D COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR019858:IPR002729; KEGG: ctc:CTC01463 hypothetical protein; PFAM: protein of unknown function DUF48; SPTR: C2A1U2 CRISPR-associated protein, Cas1 family; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 2824443..2825447 Arcobacter nitrofigilis DSM 7299 9172994 YP_003656954.1 CDS Arnit_2799 NC_014166.1 2825449 2825763 D COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: cha:CHAB381_0393 CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; SPTR: C2A1U1 CRISPR-associated protein, Cas2 family; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; CRISPR-associated protein Cas2 2825449..2825763 Arcobacter nitrofigilis DSM 7299 9172995 YP_003656955.1 CDS Arnit_2800 NC_014166.1 2827303 2828151 D COGs: COG4922 conserved hypothetical protein; InterPro IPR009959; KEGG: cps:CPS_4656 putative lipoprotein; PFAM: protein of unknown function DUF1486; SPTR: A3UNR4 Putative uncharacterized protein; hypothetical protein 2827303..2828151 Arcobacter nitrofigilis DSM 7299 9172996 YP_003656956.1 CDS Arnit_2801 NC_014166.1 2828227 2828664 D COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: drm:Dred_0308 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A4J1A3 Transcriptional regulator, MarR family; PFAM: MarR family; MarR family transcriptional regulator 2828227..2828664 Arcobacter nitrofigilis DSM 7299 9172997 YP_003656957.1 CDS Arnit_2802 NC_014166.1 2828661 2829059 R COGs: COG3019 metal-binding protein; InterPro IPR007332; KEGG: cco:CCC13826_1707 hypothetical protein; PFAM: protein of unknown function DUF411; SPTR: A7ZFU9 CopG protein; PFAM: Protein of unknown function, DUF; hypothetical protein complement(2828661..2829059) Arcobacter nitrofigilis DSM 7299 9172998 YP_003656958.1 CDS Arnit_2803 NC_014166.1 2829056 2829754 R COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: pat:Patl_1866 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q15UQ2 ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein complement(2829056..2829754) Arcobacter nitrofigilis DSM 7299 9172999 YP_003656959.1 CDS Arnit_2804 NC_014166.1 2829756 2830493 R COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: cps:CPS_1929 putative sulfonate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q483V7 Putative sulfonate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component complement(2829756..2830493) Arcobacter nitrofigilis DSM 7299 9173000 YP_003656960.1 CDS Arnit_2805 NC_014166.1 2830493 2831446 R COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: cps:CPS_1928 putative sulfonate ABC transporter, periplasmic sulfonate-binding protein; SPTR: Q483V8 Putative sulfonate ABC transporter, periplasmic sulfonate-binding protein; PFAM: NMT1/THI5 like; putative sulfonate ABC transporter periplasmic sulfonate-binding protein complement(2830493..2831446) Arcobacter nitrofigilis DSM 7299 9173001 YP_003656961.1 CDS Arnit_2806 NC_014166.1 2831594 2832007 D InterPro IPR009056; KEGG: mch:Mchl_1538 cytochrome c550; SPTR: C5AXV6 Putative cytochrome c550; PFAM: Cytochrome c; cytochrome c550 2831594..2832007 Arcobacter nitrofigilis DSM 7299 9173002 YP_003656962.1 CDS Arnit_2807 NC_014166.1 2832011 2832877 D COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638; KEGG: swd:Swoo_2256 hypothetical protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Q2BNS3 Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; family 3 extracellular solute-binding protein 2832011..2832877 Arcobacter nitrofigilis DSM 7299 9173003 YP_003656963.1 CDS Arnit_2808 NC_014166.1 2832888 2833628 D KEGG: pmy:Pmen_1960 hypothetical protein; SPTR: A4XTQ5 Putative uncharacterized protein; PFAM: Sulphur oxidation protein SoxZ; hypothetical protein 2832888..2833628 Arcobacter nitrofigilis DSM 7299 9173004 YP_003656964.1 CDS Arnit_2809 NC_014166.1 2833625 2834542 D COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dar:Daro_1026 beta-lactamase-like; SPTR: Q47H99 Beta-lactamase-like; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase 2833625..2834542 Arcobacter nitrofigilis DSM 7299 9173005 YP_003656965.1 CDS Arnit_2810 NC_014166.1 2834552 2835964 R COGs: COG0260 Leucyl aminopeptidase; InterPro IPR000819:IPR008283; KEGG: abu:Abu_0702 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; PRIAM: Leucyl aminopeptidase; SPTR: A8ESP3 Aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; leucyl aminopeptidase complement(2834552..2835964) Arcobacter nitrofigilis DSM 7299 9173006 YP_003656966.1 CDS Arnit_2811 NC_014166.1 2835961 2836806 R COGs: COG1284 conserved hypothetical protein; InterPro IPR003740:IPR019264; KEGG: abu:Abu_1411 hypothetical protein; PFAM: protein of unknown function DUF161; Protein of unknown function DUF2179; SPTR: A8EUP2 Conserved hypothetical membrane protein (DUF161); PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein complement(2835961..2836806) Arcobacter nitrofigilis DSM 7299 9173007 YP_003656967.1 CDS Arnit_2812 NC_014166.1 2836860 2837738 R COGs: COG3449 DNA gyrase inhibitor; InterProIPR018062:IPR020449:IPR012287:IPR011256:IPR 009057:IPR018060:IPR000005:IPR010499; KEGG: abu:Abu_2021 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EWB5 Transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(2836860..2837738) Arcobacter nitrofigilis DSM 7299 9173008 YP_003656968.1 CDS Arnit_2813 NC_014166.1 2837846 2838955 D COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR015421:IPR015422:IPR015424:IPR004839; KEGG: abu:Abu_2022 aminotransferase, classes I and II; PFAM: aminotransferase class I and II; SPTR: A8EWB6 Aminotransferase, classes I and II; PFAM: Aminotransferase class I and II; GntR family transcriptional regulator 2837846..2838955 Arcobacter nitrofigilis DSM 7299 9173009 YP_003656969.1 CDS Arnit_2814 NC_014166.1 2839032 2839232 D InterPro IPR010035:IPR012675:IPR016155:IPR003749; KEGG: abu:Abu_0256 hypothetical protein; PFAM: thiamineS protein; SPTR: B6BLP6 Thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2839032..2839232 Arcobacter nitrofigilis DSM 7299 9173010 YP_003656970.1 CDS Arnit_2815 NC_014166.1 2839232 2841316 D COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006655:IPR009010:IPR006963:IPR006656:IPR 006657; KEGG: sun:SUN_0228 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: A6Q6S9 Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; molybdopterin oxidoreductase 2839232..2841316 Arcobacter nitrofigilis DSM 7299 9173011 YP_003656971.1 CDS Arnit_2816 NC_014166.1 2841300 2841635 D COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR011335:IPR003509; KEGG: abu:Abu_0255 hypothetical protein; PFAM: protein of unknown function UPF0102; SPTR: A8ERF6 UPF0102 protein Abu_0255; PFAM: Uncharacterised protein family UPF0102; hypothetical protein 2841300..2841635 Arcobacter nitrofigilis DSM 7299 9173012 YP_003656972.1 CDS Arnit_2817 NC_014166.1 2841630 2843042 R COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR014743; KEGG: abu:Abu_1774 voltage-gated chloride channel family protein; PFAM: Cl- channel voltage-gated family protein; SPTR: A8EVP7 Voltage-gated chloride channel family protein; PFAM: Voltage gated chloride channel; Cl- channel voltage-gated family protein complement(2841630..2843042) Arcobacter nitrofigilis DSM 7299 9173013 YP_003656973.1 CDS Arnit_2818 NC_014166.1 2843136 2843813 R COGs: COG2928 conserved hypothetical protein; KEGG: sul:SYO3AOP1_0557 protein of unknown function DUF502; SPTR: C4C031 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF502); hypothetical protein complement(2843136..2843813) Arcobacter nitrofigilis DSM 7299 9173014 YP_003656974.1 CDS Arnit_2819 NC_014166.1 2843902 2845506 D COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR016040:IPR003148:IPR006153; KEGG: cps:CPS_1761 putative glutathione-regulated potassium-efflux system protein KefB; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; SPTR: Q484M3 Putative glutathione-regulated potassium-efflux system protein KefB; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; sodium/hydrogen exchanger 2843902..2845506 Arcobacter nitrofigilis DSM 7299 9173015 YP_003656975.1 CDS Arnit_2820 NC_014166.1 2845691 2846779 D COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR001917:IPR015421:IPR015424:IPR004839; KEGG: abu:Abu_0254 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: A8ERF5 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II; 8-amino-7-oxononanoate synthase 2845691..2846779 Arcobacter nitrofigilis DSM 7299 9173016 YP_003656976.1 CDS Arnit_2821 NC_014166.1 2846793 2847440 D COGs: COG0288 Carbonic anhydrase; InterPro IPR015892:IPR001765; KEGG: abu:Abu_0253 carbonic anhydrase; PFAM: carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: A8ERF4 Carbonic anhydrase; PFAM: Carbonic anhydrase; carbonate dehydratase 2846793..2847440 Arcobacter nitrofigilis DSM 7299 9173017 YP_003656977.1 CDS Arnit_2822 NC_014166.1 2847437 2847754 D KEGG: abu:Abu_0252 hypothetical protein; SPTR: A8ERF3 Putative uncharacterized protein; hypothetical protein 2847437..2847754 Arcobacter nitrofigilis DSM 7299 9173018 YP_003656978.1 CDS Arnit_2823 NC_014166.1 2847756 2848817 D COGs: COG1060 Thiamine biosynthesis protein ThiH; InterProIPR005244:IPR020050:IPR013785:IPR006638:IPR 007197; KEGG: abu:Abu_0251 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ERF2 Putative uncharacterized protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; radical SAM domain-containing protein 2847756..2848817 Arcobacter nitrofigilis DSM 7299 9173019 YP_003656979.1 CDS Arnit_2824 NC_014166.1 2848819 2850405 R KEGG: abu:Abu_0250 hypothetical protein; SPTR: A8ERF1 Putative uncharacterized protein; hypothetical protein complement(2848819..2850405) Arcobacter nitrofigilis DSM 7299 9173020 YP_003656980.1 CDS Arnit_2825 NC_014166.1 2850417 2851031 R COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: abu:Abu_0249 putative lipoprotein; PFAM: protein of unknown function DUF374; SPTR: A8ERF0 Putative lipoprotein; PFAM: Domain of unknown function (DUF374); hypothetical protein complement(2850417..2851031) Arcobacter nitrofigilis DSM 7299 9173021 YP_003656981.1 CDS Arnit_2826 NC_014166.1 2851028 2852347 R COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR006463:IPR002792:IPR013848:IPR 006638:IPR007197; KEGG: abu:Abu_0248 tRNA-methylthiotransferase; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB complement(2851028..2852347) Arcobacter nitrofigilis DSM 7299 9173022 YP_003656982.1 CDS Arnit_2827 NC_014166.1 2852366 2852608 R KEGG: abu:Abu_0247 hypothetical protein; SPTR: A8ERE8 Putative uncharacterized protein; hypothetical protein complement(2852366..2852608) Arcobacter nitrofigilis DSM 7299 9173023 YP_003656983.1 CDS Arnit_2828 NC_014166.1 2852757 2853932 D COGs: COG0195 Transcription elongation factor; InterProIPR010213:IPR013735:IPR012340:IPR015946:IPR 009019:IPR016027:IPR003029; KEGG: abu:Abu_0246 transcription elongation factor NusA; PFAM: NusA domain protein; SPTR: A8ERE7 Transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA 2852757..2853932 Arcobacter nitrofigilis DSM 7299 9173024 YP_003656984.1 CDS Arnit_2829 NC_014166.1 2853932 2855335 D COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR000209:IPR002308:IPR015803:IPR014729:IPR 009080:IPR015273; KEGG: abu:Abu_0245 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: A8ERE6 Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 2853932..2855335 Arcobacter nitrofigilis DSM 7299 9173025 YP_003656985.1 CDS Arnit_2830 NC_014166.1 2855343 2856302 R KEGG: ckr:CKR_1031 hypothetical protein; SPTR: B9E0Q7 Putative uncharacterized protein; hypothetical protein complement(2855343..2856302) Arcobacter nitrofigilis DSM 7299 9173026 YP_003656986.1 CDS Arnit_2831 NC_014166.1 2856450 2856707 R COGs: COG0238 Ribosomal protein S18; InterPro IPR018275:IPR001648; KEGG: abu:Abu_0243 30S ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: A8ERE4 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 complement(2856450..2856707) Arcobacter nitrofigilis DSM 7299 9173027 YP_003656987.1 CDS Arnit_2832 NC_014166.1 2856723 2857250 R COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR012340:IPR016027:IPR000424; KEGG: abu:Abu_0242 single-strand DNA binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: A8ERE3 Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single-strand binding protein complement(2856723..2857250) Arcobacter nitrofigilis DSM 7299 9173028 YP_003656988.1 CDS Arnit_2833 NC_014166.1 2857271 2857633 R COGs: COG0360 Ribosomal protein S6; InterPro IPR000529:IPR014717:IPR020814; KEGG: abu:Abu_0241 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; SPTR: A8ERE2 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 complement(2857271..2857633) Arcobacter nitrofigilis DSM 7299 9173029 YP_003656989.1 CDS Arnit_2834 NC_014166.1 2857702 2858685 R COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: abu:Abu_0240 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta; SPTR: A8ERE1 Putative uncharacterized protein; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III delta complement(2857702..2858685) Arcobacter nitrofigilis DSM 7299 9173030 YP_003656990.1 CDS Arnit_2835 NC_014166.1 2858678 2860534 R COGs: COG0557 Exoribonuclease R; InterPro IPR001900; KEGG: abu:Abu_0238 ribonuclease R; PFAM: ribonuclease II; PRIAM: Exoribonuclease II; SPTR: A8ERD9 Ribonuclease R; PFAM: RNB domain; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; exoribonuclease II complement(2858678..2860534) Arcobacter nitrofigilis DSM 7299 9173031 YP_003656991.1 CDS Arnit_2836 NC_014166.1 2860642 2861664 D COGs: COG0059 Ketol-acid reductoisomerase; InterProIPR013023:IPR016040:IPR008927:IPR013116:IPR 000506; KEGG: abu:Abu_0237 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: A8ERD8 Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase 2860642..2861664 Arcobacter nitrofigilis DSM 7299 9173032 YP_003656992.1 CDS Arnit_2837 NC_014166.1 2861708 2862874 D COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: abu:Abu_0236 hypothetical protein; PFAM: protein of unknown function DUF610 YibQ; SPTR: A8ERD7 Putative uncharacterized protein; PFAM: Divergent polysaccharide deacetylase; hypothetical protein 2861708..2862874 Arcobacter nitrofigilis DSM 7299 9173033 YP_003656993.1 CDS Arnit_2838 NC_014166.1 2862885 2863367 R KEGG: cco:CCC13826_0296 hypothetical protein; SPTR: A7ZG56 Putative lipoprotein; hypothetical protein complement(2862885..2863367) Arcobacter nitrofigilis DSM 7299 9173034 YP_003656994.1 CDS Arnit_2839 NC_014166.1 2863506 2865374 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090:IPR004089:IPR003660; KEGG: abu:Abu_0528 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ES71 Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(2863506..2865374) Arcobacter nitrofigilis DSM 7299 9173035 YP_003656995.1 CDS Arnit_2840 NC_014166.1 2865576 2866382 D COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001320:IPR001638; KEGG: cjr:CJE0906 amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: Q5HUX7 Amino acid-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; family 3 extracellular solute-binding protein 2865576..2866382 Arcobacter nitrofigilis DSM 7299 9173036 YP_003656996.1 CDS Arnit_2841 NC_014166.1 2866386 2867183 D COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: gsu:GSU2650 amino acid ABC transporter, permease protein, putative; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B9XMX9 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit 2866386..2867183 Arcobacter nitrofigilis DSM 7299 9173037 YP_003656997.1 CDS Arnit_2842 NC_014166.1 2867244 2868017 D COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: abu:Abu_0235 smf protein, DNA processing chain A; PFAM: SMF family protein; SPTR: A8ERD6 SMF protein, DNA processing chain A; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; SMF family protein 2867244..2868017 Arcobacter nitrofigilis DSM 7299 9173038 YP_003656998.1 CDS Arnit_2843 NC_014166.1 2868019 2869200 R COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: sun:SUN_0117 NhaA family Na(+)/H(+) antiporter; PFAM: Na+/H+ antiporter NhaA; SPTR: A6Q6G8 Na(+)/H(+) antiporter nhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA complement(2868019..2869200) Arcobacter nitrofigilis DSM 7299 9173039 YP_003656999.1 CDS Arnit_2844 NC_014166.1 2869216 2870526 R COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterProIPR018265:IPR005758:IPR016040:IPR013221:IPR 004101:IPR000713; KEGG: abu:Abu_0234 UDP-N-acetylmuramate--L-alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: A8ERD5 UDP-N-acetylmuramate--alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(2869216..2870526) Arcobacter nitrofigilis DSM 7299 9173040 YP_003657000.1 CDS Arnit_2845 NC_014166.1 2870528 2871106 R KEGG: abu:Abu_0233 hypothetical protein; SPTR: A8ERD4 Putative uncharacterized protein; hypothetical protein complement(2870528..2871106) Arcobacter nitrofigilis DSM 7299 9173041 YP_003657001.1 CDS Arnit_2846 NC_014166.1 2871099 2872229 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR015421:IPR015424:IPR004839; KEGG: abu:Abu_0232 hypothetical protein; PFAM: aminotransferase class I and II; SPTR: A8ERD3 Aspartate aminotransferase, aminotransferase, classes I and II; PFAM: Aminotransferase class I and II; class I and II aminotransferase complement(2871099..2872229) Arcobacter nitrofigilis DSM 7299 9173042 YP_003657002.1 CDS Arnit_2847 NC_014166.1 2872243 2873667 R COGs: COG3400 conserved hypothetical protein; InterPro IPR016040:IPR006037; KEGG: abu:Abu_0231 hypothetical protein; PFAM: TrkA-C domain protein; SPTR: A8ERD2 Putative uncharacterized protein; PFAM: TrkA-C domain; TrkA-C domain-containing protein complement(2872243..2873667) Arcobacter nitrofigilis DSM 7299 9173043 YP_003657003.1 CDS Arnit_2848 NC_014166.1 2873703 2874560 R KEGG: lba:Lebu_0382 single-stranded-DNA-specific exonuclease RecJ; SPTR: A1ANY5 Putative uncharacterized protein; hypothetical protein complement(2873703..2874560) Arcobacter nitrofigilis DSM 7299 9173044 YP_003657004.1 CDS Arnit_2849 NC_014166.1 2874553 2876067 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR009082:IPR005467:IPR 003660:IPR003661; KEGG: abu:Abu_0455 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: A8ES06 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(2874553..2876067) Arcobacter nitrofigilis DSM 7299 9173045 YP_003657005.1 CDS Arnit_2850 NC_014166.1 2876078 2877535 R COGs: COG1538 Outer membrane protein; KEGG: ppd:Ppro_1440 outer membrane efflux protein; SPTR: A1ANY6 Outer membrane efflux protein; PFAM: Outer membrane efflux protein; outer membrane protein complement(2876078..2877535) Arcobacter nitrofigilis DSM 7299 9173046 YP_003657006.1 CDS Arnit_2851 NC_014166.1 2877663 2878793 D COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: abu:Abu_0230 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: A8ERD1 Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; queuine tRNA-ribosyltransferase 2877663..2878793 Arcobacter nitrofigilis DSM 7299 9173047 YP_003657007.1 CDS Arnit_2852 NC_014166.1 2878897 2879187 D COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: abu:Abu_0229 aspartyl/glutamyl-tRNA amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: A8ERD0 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 2878897..2879187 Arcobacter nitrofigilis DSM 7299 9173048 YP_003657008.1 CDS Arnit_2853 NC_014166.1 2879197 2879538 D COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006504:IPR012335:IPR012336:IPR006660; KEGG: abu:Abu_0228 hypothetical protein; PFAM: arsenate reductase and related; SPTR: A8ERC9 Putative uncharacterized protein; PFAM: ArsC family; TIGRFAM: conserved hypothetical protein; arsenate reductase-like protein 2879197..2879538 Arcobacter nitrofigilis DSM 7299 9173049 YP_003657009.1 CDS Arnit_2854 NC_014166.1 2879552 2879884 R KEGG: cno:NT01CX_1883 hypothetical protein; SPTR: C5VPY4 Peptidase, M16 family; hypothetical protein complement(2879552..2879884) Arcobacter nitrofigilis DSM 7299 9173050 YP_003657010.1 CDS Arnit_2855 NC_014166.1 2879982 2881010 R KEGG: abu:Abu_1415 hypothetical protein; SPTR: A8EUP6 Putative uncharacterized protein; hypothetical protein complement(2879982..2881010) Arcobacter nitrofigilis DSM 7299 9173051 YP_003657011.1 CDS Arnit_2856 NC_014166.1 2881032 2882384 R COGs: COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR002480; KEGG: abu:Abu_0223 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase (DAHP synthetase class II); PFAM: DAHP synthetase class II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: A8ERC6 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase (DAHP synthetase class II); TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2881032..2882384) Arcobacter nitrofigilis DSM 7299 9173052 YP_003657012.1 CDS Arnit_2857 NC_014166.1 2882413 2883405 R COGs: COG0176 Transaldolase; InterPro IPR018225:IPR004732:IPR013785:IPR001585; KEGG: abu:Abu_0222 transaldolase; PFAM: Transaldolase; SPTR: A8ERC5 Transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: transaldolase, mycobacterial type; transaldolase complement(2882413..2883405) Arcobacter nitrofigilis DSM 7299 9173053 YP_003657013.1 CDS Arnit_2858 NC_014166.1 2883525 2884145 R COGs: COG0560 Phosphoserine phosphatase; InterPro IPR004469:IPR006383:IPR005834; KEGG: abu:Abu_0221 3-phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; PRIAM: Phosphoserine phosphatase; SPTR: A8ERC4 3-phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB; phosphoserine phosphatase SerB complement(2883525..2884145) Arcobacter nitrofigilis DSM 7299 9173054 YP_003657014.1 CDS Arnit_2859 NC_014166.1 2884256 2884636 D COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227:IPR012337:IPR006641; KEGG: abu:Abu_0219 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: A8ERC2 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250; Holliday junction resolvase YqgF 2884256..2884636 Arcobacter nitrofigilis DSM 7299 9173055 YP_003657015.1 CDS Arnit_2860 NC_014166.1 2884838 2885152 R KEGG: cbk:CLL_A2031 large conductance mechanosensitive channel protein; SPTR: B2TMA7 Large conductance mechanosensitive channel protein; hypothetical protein complement(2884838..2885152) Arcobacter nitrofigilis DSM 7299 9173056 YP_003657016.1 CDS Arnit_2861 NC_014166.1 2885184 2885795 R COGs: COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family); InterPro IPR014094; KEGG: plt:Plut_0084 hypothetical protein; SPTR: Q3B6Q7 Putative uncharacterized protein; TIGRFAM: membrane lipoprotein lipid attachment site; TIGRFAM: uncharacterized proteobacterial lipoprotein; membrane lipoprotein lipid attachment site complement(2885184..2885795) Arcobacter nitrofigilis DSM 7299 9173057 YP_003657017.1 CDS Arnit_2862 NC_014166.1 2885804 2886247 R KEGG: pvi:Cvib_0157 hypothetical protein; SPTR: A4SCH1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1425); hypothetical protein complement(2885804..2886247) Arcobacter nitrofigilis DSM 7299 9173058 YP_003657018.1 CDS Arnit_2863 NC_014166.1 2886257 2887591 R COGs: COG3014 conserved hypothetical protein; KEGG: cju:C8J_0082 putative lipoprotein; SPTR: A8FJP4 Putative lipoprotein; putative lipoprotein complement(2886257..2887591) Arcobacter nitrofigilis DSM 7299 9173059 YP_003657019.1 CDS Arnit_2864 NC_014166.1 2887594 2887944 R COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); InterPro IPR002582:IPR004568:IPR008278; KEGG: abu:Abu_0217 holo-(acyl-carrier-protein) synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: A8ERC0 Holo-[acyl-carrier-protein] synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase; holo-acyl-carrier-protein synthase complement(2887594..2887944) Arcobacter nitrofigilis DSM 7299 9173060 YP_003657020.1 CDS Arnit_2865 NC_014166.1 2888104 2889063 D COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: abu:Abu_0216 oligopeptide ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8ERB9 Oligopeptide ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transporter inner membrane component 2888104..2889063 Arcobacter nitrofigilis DSM 7299 9173061 YP_003657021.1 CDS Arnit_2866 NC_014166.1 2889132 2889956 D COGs: COG0414 Panthothenate synthetase; InterPro IPR003721:IPR014729; KEGG: abu:Abu_0215 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; PRIAM: Pantoate--beta-alanine ligase; SPTR: A8ERB8 Pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; pantoate/beta-alanine ligase 2889132..2889956 Arcobacter nitrofigilis DSM 7299 9173062 YP_003657022.1 CDS Arnit_2867 NC_014166.1 2889971 2890153 R KEGG: sun:SUN_0710 hypothetical protein; SPTR: A6Q860 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892); hypothetical protein complement(2889971..2890153) Arcobacter nitrofigilis DSM 7299 9173063 YP_003657023.1 CDS Arnit_2868 NC_014166.1 2890324 2891664 D COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR005840:IPR013848:IPR006638:IPR 007197; KEGG: abu:Abu_0214 MiaB-like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ERB7 Ribosomal protein S12 methylthiotransferase rimO; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family; MiaB-like tRNA modifying protein YliG 2890324..2891664 Arcobacter nitrofigilis DSM 7299 9173064 YP_003657024.1 CDS Arnit_2869 NC_014166.1 2891664 2892638 D COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR012795:IPR014729:IPR011063; KEGG: abu:Abu_0213 tRNA(Ile)-lysidine synthase; PFAM: PP-loop domain protein; SPTR: A8ERB6 tRNA(Ile)-lysidine synthase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthetase 2891664..2892638 Arcobacter nitrofigilis DSM 7299 9173065 YP_003657025.1 CDS Arnit_2870 NC_014166.1 2892627 2892896 R KEGG: abu:Abu_0212 hypothetical protein; SPTR: A8ERB5 Putative uncharacterized protein; hypothetical protein complement(2892627..2892896) Arcobacter nitrofigilis DSM 7299 9173066 YP_003657026.1 CDS Arnit_2871 NC_014166.1 2892872 2893228 R COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: abu:Abu_0211 flagellar protein FliS; PFAM: flagellar protein FliS; SPTR: A8ERB4 Flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar protein FliS complement(2892872..2893228) Arcobacter nitrofigilis DSM 7299 9173067 YP_003657027.1 CDS Arnit_2872 NC_014166.1 2893280 2894881 R COGs: COG1345 Flagellar capping protein; InterPro IPR003481:IPR010809; KEGG: abu:Abu_0210 flagellar hook-associated protein 2; PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; SPTR: A8ERB3 Flagellar hook-associated protein 2; PFAM: Flagellar hook-associated protein 2 C-terminus; flagellar hook-associated 2 domain-containing protein complement(2893280..2894881) Arcobacter nitrofigilis DSM 7299 9173068 YP_003657028.1 CDS Arnit_2873 NC_014166.1 2894892 2897633 R COGs: COG1256 Flagellar hook-associated protein; InterPro IPR000896:IPR002371:IPR001444:IPR010930; KEGG: abu:Abu_0209 flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8ERB2 Flagellar hook-associated protein FlgK; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK; hypothetical protein complement(2894892..2897633) Arcobacter nitrofigilis DSM 7299 9173069 YP_003657029.1 CDS Arnit_2874 NC_014166.1 2897697 2898410 R COGs: COG2063 Flagellar basal body L-ring protein; InterPro IPR000527; KEGG: abu:Abu_0208 flagellar basal body L-ring protein FlgH; PFAM: flagellar L-ring protein; SPTR: A8ERB1 Flagellar basal body L-ring protein FlgH; PFAM: Flagellar L-ring protein; flagellar L-ring protein complement(2897697..2898410) Arcobacter nitrofigilis DSM 7299 9173070 YP_003657030.1 CDS Arnit_2875 NC_014166.1 2898400 2898819 R KEGG: abu:Abu_0207 hypothetical protein; SPTR: A8ERB0 Putative uncharacterized protein; hypothetical protein complement(2898400..2898819) Arcobacter nitrofigilis DSM 7299 9173071 YP_003657031.1 CDS Arnit_2876 NC_014166.1 2898825 2899355 R COGs: COG1580 Flagellar basal body-associated protein; InterPro IPR005503; KEGG: abu:Abu_0206 flagellar basal body-associated protein; PFAM: flagellar basal body-associated protein FliL; SPTR: A8ERA9 Flagellar basal body-associated protein; PFAM: Flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL complement(2898825..2899355) Arcobacter nitrofigilis DSM 7299 9173072 YP_003657032.1 CDS Arnit_2877 NC_014166.1 2899355 2899849 R KEGG: abu:Abu_0205 hypothetical protein; SPTR: A8ERA8 Putative uncharacterized protein; hypothetical protein complement(2899355..2899849) Arcobacter nitrofigilis DSM 7299 9173073 YP_003657033.1 CDS Arnit_2878 NC_014166.1 2899862 2900266 R KEGG: abu:Abu_0204 hypothetical protein; SPTR: A8ERA7 Putative uncharacterized protein; hypothetical protein complement(2899862..2900266) Arcobacter nitrofigilis DSM 7299 9173074 YP_003657034.1 CDS Arnit_2879 NC_014166.1 2900263 2900535 R InterPro IPR002191; KEGG: abu:Abu_0203 flagellar basal body protein FliQ; PFAM: export protein FliQ family 3; SPTR: A8ERA6 Flagellar basal body protein FliQ; PFAM: Bacterial export proteins, family 3; export protein FliQ family 3 complement(2900263..2900535) Arcobacter nitrofigilis DSM 7299 9173075 YP_003657035.1 CDS Arnit_2880 NC_014166.1 2900532 2901356 R KEGG: abu:Abu_0202 hypothetical protein; SPTR: A8ERA5 Putative uncharacterized protein; hypothetical protein complement(2900532..2901356) Arcobacter nitrofigilis DSM 7299 9173076 YP_003657036.1 CDS Arnit_2881 NC_014166.1 2901447 2902496 D COGs: COG1706 Flagellar basal-body P-ring protein; InterPro IPR001782; KEGG: abu:Abu_0201 flagellar P-ring protein FlgI; PFAM: flagellar P-ring protein; SPTR: A8ERA4 Flagellar P-ring protein; PFAM: Flagellar P-ring protein; flagellar P-ring protein 2901447..2902496 Arcobacter nitrofigilis DSM 7299 9173077 YP_003657037.1 CDS Arnit_2882 NC_014166.1 2902500 2903594 D COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689:IPR001543; KEGG: abu:Abu_0200 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: A8ERA3 Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliM 2902500..2903594 Arcobacter nitrofigilis DSM 7299 9173078 YP_003657038.1 CDS Arnit_2883 NC_014166.1 2903600 2904613 R COGs: COG0418 Dihydroorotase; InterPro IPR002195:IPR004721:IPR006992; KEGG: abu:Abu_0199 dihydroorotase; PFAM: amidohydrolase 2; PRIAM: Dihydroorotase; SPTR: A8ERA2 Dihydroorotase; TIGRFAM: dihydroorotase, homodimeric type; PFAM: Amidohydrolase; TIGRFAM: dihydroorotase, homodimeric type; dihydroorotase complement(2903600..2904613) Arcobacter nitrofigilis DSM 7299 9173079 YP_003657039.1 CDS Arnit_2884 NC_014166.1 2904613 2904951 R COGs: COG0347 Nitrogen regulatory protein PII; InterProIPR002332:IPR017918:IPR002187:IPR015867:IPR 011322; KEGG: abu:Abu_0198 nitrogen regulatory protein PII; PFAM: nitrogen regulatory protein P-II; SPTR: A8ERA1 Nitrogen regulatory protein PII; PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2904613..2904951) Arcobacter nitrofigilis DSM 7299 9173080 YP_003657040.1 CDS Arnit_2885 NC_014166.1 2905049 2906233 R COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: tdn:Suden_0643 Rh-like protein/ammonium transporter; PFAM: ammonium transporter; SPTR: Q30SV9 Amt-family transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; ammonium transporter complement(2905049..2906233) Arcobacter nitrofigilis DSM 7299 9173081 YP_003657041.1 CDS Arnit_2886 NC_014166.1 2906453 2906791 R COGs: COG0347 Nitrogen regulatory protein PII; InterProIPR002332:IPR017918:IPR002187:IPR015867:IPR 011322; KEGG: abu:Abu_0198 nitrogen regulatory protein PII; PFAM: nitrogen regulatory protein P-II; SPTR: A8ERA1 Nitrogen regulatory protein PII; PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2906453..2906791) Arcobacter nitrofigilis DSM 7299 9173082 YP_003657042.1 CDS Arnit_2887 NC_014166.1 2906869 2908083 R COGs: COG0004 Ammonia permease; InterPro IPR018047:IPR019879:IPR001905; KEGG: sil:SPO3723 ammonium transporter; PFAM: ammonium transporter; SPTR: A8TXN7 Ammonium transporter; TIGRFAM: putative ammonium transporter, marine subtype; ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; putative ammonium transportertype complement(2906869..2908083) Arcobacter nitrofigilis DSM 7299 9173083 YP_003657043.1 CDS Arnit_2888 NC_014166.1 2908233 2909096 D KEGG: abu:Abu_0196 hypothetical protein; SPTR: A8ER99 Putative uncharacterized protein; hypothetical protein 2908233..2909096 Arcobacter nitrofigilis DSM 7299 9173084 YP_003657044.1 CDS Arnit_2889 NC_014166.1 2909132 2909881 D KEGG: abu:Abu_0195 hypothetical protein; SPTR: A8ER98 Putative uncharacterized protein; response regulator receiver protein 2909132..2909881 Arcobacter nitrofigilis DSM 7299 9173085 YP_003657045.1 CDS Arnit_2890 NC_014166.1 2909878 2912412 D COGs: COG2844 UTP:GlnB (protein PII) uridylyltransferase; InterPro IPR013546:IPR006674; KEGG: abu:Abu_0194 protein-P-II uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; PRIAM: [Protein-PII] uridylyltransferase; SPTR: A8ER97 Protein-P-II uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; HD domain; TIGRFAM: [Protein-PII] uridylyltransferase; metal dependent phosphohydrolase 2909878..2912412 Arcobacter nitrofigilis DSM 7299 9173086 YP_003657046.1 CDS Arnit_2891 NC_014166.1 2912424 2914166 R COGs: COG4232 Thiol:disulfide interchange protein; InterProIPR017937:IPR012335:IPR012336:IPR017936:IPR 003834:IPR013766; KEGG: abu:Abu_2187 thiol:disulfide interchange protein DsbD; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; SPTR: A8EWS8 Thiol:disulfide interchange protein DsbD; PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; cytochrome c biogenesis protein transmembrane region complement(2912424..2914166) Arcobacter nitrofigilis DSM 7299 9173087 YP_003657047.1 CDS Arnit_2892 NC_014166.1 2914178 2914543 R COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR017937:IPR006662:IPR012335:IPR012336:IPR 017936:IPR013766; KEGG: pgn:PGN_0033 thioredoxin; PFAM: Thioredoxin domain; SPTR: C6LDG3 Thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin domain-containing protein complement(2914178..2914543) Arcobacter nitrofigilis DSM 7299 9173088 YP_003657048.1 CDS Arnit_2893 NC_014166.1 2914669 2915025 D InterPro IPR001763; KEGG: nis:NIS_1608 rhodanese family protein; SPTR: A6Q5F5 Rhodanese family protein; PFAM: Rhodanese-like domain; rhodanese family protein 2914669..2915025 Arcobacter nitrofigilis DSM 7299 9173089 YP_003657049.1 CDS Arnit_2894 NC_014166.1 2915053 2915268 R KEGG: abu:Abu_2190 hypothetical protein; SPTR: A8EWT1 Putative uncharacterized protein; hypothetical protein complement(2915053..2915268) Arcobacter nitrofigilis DSM 7299 9173090 YP_003657050.1 CDS Arnit_2895 NC_014166.1 2915351 2916160 R COGs: COG0688 Phosphatidylserine decarboxylase; InterPro IPR005221:IPR003817; KEGG: abu:Abu_2192 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: A8EWT3 Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; phosphatidylserine decarboxylase complement(2915351..2916160) Arcobacter nitrofigilis DSM 7299 9173091 YP_003657051.1 CDS Arnit_2896 NC_014166.1 2916292 2916546 D KEGG: sun:SUN_0227 hypothetical protein; SPTR: B6BLV7 Putative uncharacterized protein; hypothetical protein 2916292..2916546 Arcobacter nitrofigilis DSM 7299 9173092 YP_003657052.1 CDS Arnit_2897 NC_014166.1 2916559 2917647 R COGs: COG2821 Membrane-bound lytic murein transglycosylase; InterPro IPR005300:IPR010611; KEGG: abu:Abu_2194 peptidoglycan N-acetylmuramoylhydrolase; PFAM: MltA domain protein; 3D domain protein; SPTR: A8EWT5 Peptidoglycan N-acetylmuramoylhydrolase; PFAM: MltA specific insert domain; 3D domain; MltA domain-containing protein complement(2916559..2917647) Arcobacter nitrofigilis DSM 7299 9173093 YP_003657053.1 CDS Arnit_2898 NC_014166.1 2917710 2917991 R KEGG: tpd:Teth39_1789 RecD/TraA family helicase; SPTR: B0KC72 Helicase, RecD/TraA family; hypothetical protein complement(2917710..2917991) Arcobacter nitrofigilis DSM 7299 9173094 YP_003657054.1 CDS Arnit_2899 NC_014166.1 2918003 2919886 R COGs: COG0443 Molecular chaperone; InterPro IPR018181:IPR012725:IPR001023:IPR013126; KEGG: abu:Abu_2195 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: A8EWT6 Chaperone protein dnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; chaperone protein DnaK complement(2918003..2919886) Arcobacter nitrofigilis DSM 7299 9173095 YP_003657055.1 CDS Arnit_2900 NC_014166.1 2920024 2920626 R COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740:IPR013805:IPR009012; KEGG: abu:Abu_2196 heat shock protein GrpE; PFAM: GrpE protein; SPTR: A8EWT7 Protein grpE; PFAM: GrpE; GrpE protein HSP-70 cofactor complement(2920024..2920626) Arcobacter nitrofigilis DSM 7299 9173096 YP_003657056.1 CDS Arnit_2901 NC_014166.1 2920637 2921428 R COGs: COG1420 Transcriptional regulator of heat shock gene; InterPro IPR011991; KEGG: abu:Abu_2197 putative heat shock regulator; SPTR: A8EWT8 Putative heat shock regulator; putative heat shock regulator complement(2920637..2921428) Arcobacter nitrofigilis DSM 7299 9173097 YP_003657057.1 CDS Arnit_2902 NC_014166.1 2922202 2923128 R KEGG: abu:Abu_0109 hypothetical protein; SPTR: B1QBV4 Putative uncharacterized protein; hypothetical protein complement(2922202..2923128) Arcobacter nitrofigilis DSM 7299 9173098 YP_003657058.1 CDS Arnit_2903 NC_014166.1 2923128 2923481 R InterPro IPR008201; KEGG: sun:SUN_0813 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: B6BKB1 Putative uncharacterized protein; PFAM: Protein of unknown function DUF86; hypothetical protein complement(2923128..2923481) Arcobacter nitrofigilis DSM 7299 9173099 YP_003657059.1 CDS Arnit_2904 NC_014166.1 2923474 2923791 R InterPro IPR002934; KEGG: abu:Abu_0798 hypothetical protein; PFAM: DNA polymerase beta domain protein region; SPTR: A8ESY9 Putative uncharacterized protein; PFAM: Nucleotidyltransferase domain; DNA polymerase beta domain-containing protein complement(2923474..2923791) Arcobacter nitrofigilis DSM 7299 9173100 YP_003657060.1 CDS Arnit_2905 NC_014166.1 2923793 2925112 R KEGG: abu:Abu_0110 hypothetical protein; SPTR: A8ER21 Putative uncharacterized protein; hypothetical protein complement(2923793..2925112) Arcobacter nitrofigilis DSM 7299 9173101 YP_003657061.1 CDS Arnit_2906 NC_014166.1 2925100 2925531 R KEGG: abu:Abu_0110 hypothetical protein; SPTR: A8ER21 Putative uncharacterized protein; hypothetical protein complement(2925100..2925531) Arcobacter nitrofigilis DSM 7299 9173102 YP_003657062.1 CDS Arnit_2907 NC_014166.1 2925709 2926527 R InterPro IPR017880:IPR018004; KEGG: pdi:BDI_2962 hypothetical protein; PFAM: KilA, N-terminal/APSES-type HTH DNA-binding domain; SPTR: A6LG56 Putative uncharacterized protein; PFAM: KilA-N domain; APSES-type HTH DNA-binding domain-containing protein complement(2925709..2926527) Arcobacter nitrofigilis DSM 7299 9173103 YP_003657063.1 CDS Arnit_2908 NC_014166.1 2926785 2927141 R KEGG: tdn:Suden_0322 hypothetical protein; SPTR: B6BLW1 Putative uncharacterized protein; hypothetical protein complement(2926785..2927141) Arcobacter nitrofigilis DSM 7299 9173104 YP_003657064.1 CDS Arnit_2909 NC_014166.1 2927138 2928286 R COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: abu:Abu_2094 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8EWI8 Major facilitator superfamily transporter; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(2927138..2928286) Arcobacter nitrofigilis DSM 7299 9173105 YP_003657065.1 CDS Arnit_2910 NC_014166.1 2928360 2929076 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011991:IPR011006:IPR001789:IPR001867; KEGG: cco:CCC13826_0722 response regulator receiver domain-containing protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A7ZBM3 DNA-binding response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(2928360..2929076) Arcobacter nitrofigilis DSM 7299 9173106 YP_003657066.1 CDS Arnit_2911 NC_014166.1 2929191 2929913 R COGs: COG0101 Pseudouridylate synthase; InterProIPR001406:IPR020094:IPR020095:IPR020103:IPR 020097; KEGG: abu:Abu_2199 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: A8EWU0 Pseudouridylate synthase; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase A complement(2929191..2929913) Arcobacter nitrofigilis DSM 7299 9173107 YP_003657067.1 CDS Arnit_2912 NC_014166.1 2929913 2930932 R COGs: COG0795 permease; InterPro IPR005495; KEGG: abu:Abu_2200 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: A8EWU1 Conserved hypothetical membrane protein; PFAM: Predicted permease YjgP/YjgQ family; YjgP/YjgQ family permease complement(2929913..2930932) Arcobacter nitrofigilis DSM 7299 9173108 YP_003657068.1 CDS Arnit_2913 NC_014166.1 2930929 2931699 R COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045; KEGG: nam:NAMH_1167 peptidase A24A, prepilin type IV; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; SPTR: B9LAA5 Peptidase A24A, prepilin type IV; PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; peptidase A24A domain-containing protein complement(2930929..2931699) Arcobacter nitrofigilis DSM 7299 9173109 YP_003657069.1 CDS Arnit_2914 NC_014166.1 2931686 2932366 R COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR018520:IPR001441; KEGG: abu:Abu_2202 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: A8EWU3 Undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl diphosphate synthase complement(2931686..2932366) Arcobacter nitrofigilis DSM 7299 9173110 YP_003657070.1 CDS Arnit_2915 NC_014166.1 2932359 2933621 R COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR005252:IPR003382:IPR007085; KEGG: abu:Abu_2203 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: A8EWU4 Bifunctional DNA /pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase complement(2932359..2933621) Arcobacter nitrofigilis DSM 7299 9173111 YP_003657071.1 CDS Arnit_2916 NC_014166.1 2933614 2934915 R COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterProIPR018357:IPR005882:IPR011004:IPR001228:IPR 001451; KEGG: abu:Abu_2204 bifunctional UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; PRIAM: Glucosamine-1-phosphate N-acetyltransferase; SPTR: A8EWU5 Bifunctional protein glmU; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; UDP-N-acetylglucosamine pyrophosphorylase complement(2933614..2934915) Arcobacter nitrofigilis DSM 7299 9173112 YP_003657072.1 CDS Arnit_2917 NC_014166.1 2934924 2936867 R InterPro IPR020683:IPR002110; KEGG: abu:Abu_2205 ankyrin repeat-containing protein; SPTR: A8EWU6 Ankyrin repeat protein; PFAM: Ankyrin repeat; ankyrin repeat-containing protein complement(2934924..2936867) Arcobacter nitrofigilis DSM 7299 9173113 YP_003657073.1 CDS Arnit_2918 NC_014166.1 2936919 2938457 R COGs: COG1202 Superfamily II helicase; InterPro IPR014021:IPR001650:IPR014001; KEGG: abu:Abu_2206 ATP-dependent RNA helicase; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: A8EWU7 Probable ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; Mitochondrial degradasome RNA helicase subunit C terminal; helicase domain-containing protein complement(2936919..2938457) Arcobacter nitrofigilis DSM 7299 9173114 YP_003657074.1 CDS Arnit_2919 NC_014166.1 2938541 2939662 D COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280:IPR011869; KEGG: abu:Abu_2207 tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; PRIAM: tRNA (uracil-5-)-methyltransferase; SPTR: A8EWU8 tRNA (uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; tRNA (uracil-5-)-methyltransferase 2938541..2939662 Arcobacter nitrofigilis DSM 7299 9173115 YP_003657075.1 CDS Arnit_2920 NC_014166.1 2939697 2941193 D COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR001029; KEGG: hpb:HELPY_0771 flagellin A; PFAM: flagellin domain protein; SPTR: A8BSM2 Flagellin A; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin domain-containing protein 2939697..2941193 Arcobacter nitrofigilis DSM 7299 9173116 YP_003657076.1 CDS Arnit_2921 NC_014166.1 2941411 2942898 D COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR001029; KEGG: nam:NAMH_1612 flagellin; PFAM: flagellin domain protein; SPTR: A8BSM5 Flagellin B; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin domain-containing protein 2941411..2942898 Arcobacter nitrofigilis DSM 7299 9173117 YP_003657077.1 CDS Arnit_2922 NC_014166.1 2943140 2946799 D COGs: COG2604 conserved hypothetical protein; InterPro IPR018253:IPR002826; KEGG: tdn:Suden_0174 hypothetical protein; PFAM: protein of unknown function DUF115; SPTR: B6BGE5 Putative uncharacterized protein; PFAM: Protein of unknown function DUF115; hypothetical protein 2943140..2946799 Arcobacter nitrofigilis DSM 7299 9173118 YP_003657078.1 CDS Arnit_2923 NC_014166.1 2946774 2947403 D COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347; KEGG: cjj:CJJ81176_1423 phosphoheptose isomerase; PFAM: sugar isomerase (SIS); SPTR: Q5HSZ5 Phosphoheptose isomerase; PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; sugar isomerase 2946774..2947403 Arcobacter nitrofigilis DSM 7299 9173119 YP_003657079.1 CDS Arnit_2924 NC_014166.1 2947403 2948089 D COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835; KEGG: cjr:CJE1608 capsular biosynthesis nucleotidyltransferase, putative; PFAM: Nucleotidyl transferase; SPTR: Q5HSZ6 Capsular biosynthesis nucleotidyltransferase, putative; PFAM: Nucleotidyl transferase; nucleotidyl transferase 2947403..2948089 Arcobacter nitrofigilis DSM 7299 9173120 YP_003657080.1 CDS Arnit_2925 NC_014166.1 2948086 2949087 D COGs: COG2605 kinase related to galactokinase and mevalonate kinase; InterProIPR014606:IPR001174:IPR014721:IPR020568:IPR 006204:IPR013750; KEGG: glo:Glov_0793 GHMP kinase; PFAM: GHMP kinase; GHMP kinase domain protein; SPTR: B3E4V4 GHMP kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; GHMP kinase 2948086..2949087 Arcobacter nitrofigilis DSM 7299 9173121 YP_003657081.1 CDS Arnit_2926 NC_014166.1 2949090 2950250 D COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015424; KEGG: mag:amb1072 pyridoxal phosphate-dependent enzyme; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Q2W8E9 Predicted pyridoxal phosphate-dependent enzyme; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; DegT/DnrJ/EryC1/StrS aminotransferase 2949090..2950250 Arcobacter nitrofigilis DSM 7299 9173122 YP_003657082.1 CDS Arnit_2927 NC_014166.1 2950265 2951203 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: cyt:cce_1234 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q4C3G4 Similar to Nucleoside-diphosphate-sugar epimerases; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 2950265..2951203 Arcobacter nitrofigilis DSM 7299 9173123 YP_003657083.1 CDS Arnit_2928 NC_014166.1 2951196 2952137 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: mma:MM_0658 GDP-fucose synthetase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q8PZ36 GDP-fucose synthetase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 2951196..2952137 Arcobacter nitrofigilis DSM 7299 9173124 YP_003657084.1 CDS Arnit_2929 NC_014166.1 2952130 2952957 D COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: glo:Glov_0795 transketolase domain protein; PFAM: Transketolase domain protein; SPTR: B6BTL3 Transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; transketolase domain-containing protein 2952130..2952957 Arcobacter nitrofigilis DSM 7299 9173125 YP_003657085.1 CDS Arnit_2930 NC_014166.1 2952947 2953861 D COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR015941:IPR009014:IPR005475:IPR005476; KEGG: glo:Glov_0796 transketolase central region; PFAM: Transketolase central region; Transketolase domain protein; SPTR: B6BTL4 1-deoxy-D-xylulose-5-phosphate synthase, putative; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase central region 2952947..2953861 Arcobacter nitrofigilis DSM 7299 9173126 YP_003657086.1 CDS Arnit_2931 NC_014166.1 2953861 2954583 D InterPro IPR002781; KEGG: mca:MCA1931 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Q606T4 Putative membrane protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 2953861..2954583 Arcobacter nitrofigilis DSM 7299 9173127 YP_003657087.1 CDS Arnit_2932 NC_014166.1 2954577 2955074 D COGs: COG0529 Adenylylsulfate kinase and related kinase; InterPro IPR002891; KEGG: cyh:Cyan8802_4040 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; SPTR: B3EYL3 Adenylyl-sulfate kinase; PFAM: Adenylylsulphate kinase; adenylylsulfate kinase 2954577..2955074 Arcobacter nitrofigilis DSM 7299 9173128 YP_003657088.1 CDS Arnit_2933 NC_014166.1 2955075 2956145 D COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); InterPro IPR014729:IPR015947:IPR002650; KEGG: hbu:Hbut_1499 sulfate adenylyltransferase; PFAM: ATP-sulfurylase; PRIAM: Sulfate adenylyltransferase; SPTR: Q5M6U8 Putative sulfate adenylyltransferase; PFAM: ATP-sulfurylase; TIGRFAM: ATP sulphurylase; sulfate adenylyltransferase 2955075..2956145 Arcobacter nitrofigilis DSM 7299 9173129 YP_003657089.1 CDS Arnit_2934 NC_014166.1 2956149 2957114 D COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015813:IPR011037; KEGG: tna:CTN_0477 pyruvate kinase; PFAM: Pyruvate kinase barrel; PRIAM: Pyruvate kinase; SPTR: Q5M6U9 Pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; pyruvate kinase 2956149..2957114 Arcobacter nitrofigilis DSM 7299 9173130 YP_003657090.1 CDS Arnit_2935 NC_014166.1 2957111 2957854 D COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR020583:IPR006240:IPR000760; KEGG: hhe:HH1440 hypothetical protein; PFAM: inositol monophosphatase; SPTR: C5F143 CysQ; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; 3'(2'),5'-bisphosphate nucleotidase 2957111..2957854 Arcobacter nitrofigilis DSM 7299 9173131 YP_003657091.1 CDS Arnit_2936 NC_014166.1 2957871 2959688 D InterPro IPR007554; KEGG: cff:CFF8240_1624 hypothetical protein; PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; SPTR: C3XKE6 Predicted protein; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 2957871..2959688 Arcobacter nitrofigilis DSM 7299 9173132 YP_003657092.1 CDS Arnit_2937 NC_014166.1 2959688 2960992 D COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: cbl:CLK_2103 putative molybdopterin cofactor synthesis protein A; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B1KYD4 Putative molybdopterin cofactor synthesis protein A; PFAM: Radical SAM superfamily; radical SAM domain-containing protein 2959688..2960992 Arcobacter nitrofigilis DSM 7299 9173133 YP_003657093.1 CDS Arnit_2938 NC_014166.1 2960989 2962449 D COGs: COG1032 Fe-S oxidoreductase; InterPro IPR013785:IPR006158:IPR006638:IPR007197; KEGG: glo:Glov_0797 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B3E4V8 Radical SAM domain protein; PFAM: Radical SAM superfamily; B12 binding domain; radical SAM domain-containing protein 2960989..2962449 Arcobacter nitrofigilis DSM 7299 9173134 YP_003657094.1 CDS Arnit_2939 NC_014166.1 2962456 2964045 R InterPro IPR003016; KEGG: cac:CAC2177 hypothetical protein; SPTR: Q97H36 Ucharacterized protein, CGEB homolog; hypothetical protein complement(2962456..2964045) Arcobacter nitrofigilis DSM 7299 9173135 YP_003657095.1 CDS Arnit_2940 NC_014166.1 2964048 2965253 R KEGG: cac:CAC2177 hypothetical protein; SPTR: Q97H36 Ucharacterized protein, CGEB homolog; hypothetical protein complement(2964048..2965253) Arcobacter nitrofigilis DSM 7299 9173136 YP_003657096.1 CDS Arnit_2941 NC_014166.1 2965257 2966354 R COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR018211:IPR001670; KEGG: cju:C8J_1329 hypothetical protein; PFAM: iron-containing alcohol dehydrogenase; SPTR: A8FN90 Putative uncharacterized protein; PFAM: Iron-containing alcohol dehydrogenase; TIGRFAM: phosphonate metabolism-associated iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(2965257..2966354) Arcobacter nitrofigilis DSM 7299 9173137 YP_003657097.1 CDS Arnit_2942 NC_014166.1 2966344 2967477 R COGs: COG4032 thiamine-pyrophosphate-binding protein; InterPro IPR017684:IPR011766; KEGG: cju:C8J_1330 hypothetical protein; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A8FN91 Putative uncharacterized protein; TIGRFAM: phosphonopyruvate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: phosphonopyruvate decarboxylase; phosphonopyruvate decarboxylase complement(2966344..2967477) Arcobacter nitrofigilis DSM 7299 9173138 YP_003657098.1 CDS Arnit_2943 NC_014166.1 2967477 2968763 R COGs: COG2513 PEP phosphonomutase; InterProIPR004821:IPR012698:IPR014729:IPR015813:IPR 004820; KEGG: dal:Dalk_1323 phosphoenolpyruvate phosphomutase; PFAM: cytidylyltransferase; SPTR: B8F9S8 Phosphoenolpyruvate phosphomutase; TIGRFAM: phosphoenolpyruvate phosphomutase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: phosphoenolpyruvate phosphomutase; cytidyltransferase-related domain; phosphoenolpyruvate phosphomutase complement(2967477..2968763) Arcobacter nitrofigilis DSM 7299 9173139 YP_003657099.1 CDS Arnit_2944 NC_014166.1 2968790 2969899 R COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: bhy:BHWA1_02682 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C0R2I6 Radical SAM domain protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(2968790..2969899) Arcobacter nitrofigilis DSM 7299 9173140 YP_003657100.1 CDS Arnit_2945 NC_014166.1 2969966 2970844 R InterPro IPR007074; KEGG: abu:Abu_2251 hypothetical protein; PFAM: LicD family protein; SPTR: A8EWZ1 Putative uncharacterized protein; PFAM: LICD Protein Family; LicD family protein complement(2969966..2970844) Arcobacter nitrofigilis DSM 7299 9173141 YP_003657101.1 CDS Arnit_2946 NC_014166.1 2970841 2971950 R COGs: COG0439 Biotin carboxylase; InterProIPR013817:IPR013815:IPR016185:IPR011761:IPR 003135; KEGG: abu:Abu_2250 ATP-grasp domain-containing protein; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; SPTR: A8EWZ0 ATP-grasp (A) domain protein; PFAM: ATP-grasp domain; ATP-dependent carboxylate-amine ligase domain-containing protein complement(2970841..2971950) Arcobacter nitrofigilis DSM 7299 9173142 YP_003657102.1 CDS Arnit_2947 NC_014166.1 2971950 2972612 R KEGG: abu:Abu_2249 flagellin modification protein FlmE; SPTR: A8EWY9 Flagellin modification protein FlmE; flagellin modification protein FlmE complement(2971950..2972612) Arcobacter nitrofigilis DSM 7299 9173143 YP_003657103.1 CDS Arnit_2948 NC_014166.1 2972602 2973579 R InterPro IPR015424; KEGG: abu:Abu_2248 hypothetical protein; SPTR: A8EWY8 Putative uncharacterized protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; hypothetical protein complement(2972602..2973579) Arcobacter nitrofigilis DSM 7299 9173144 YP_003657104.1 CDS Arnit_2949 NC_014166.1 2973566 2974588 R COGs: COG3980 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase; KEGG: abu:Abu_2247 glycosyltransferase; SPTR: A8EWY7 Glycosyltransferase; PFAM: Glycosyltransferase family 28 C-terminal domain; glycosyltransferase complement(2973566..2974588) Arcobacter nitrofigilis DSM 7299 9173145 YP_003657105.1 CDS Arnit_2950 NC_014166.1 2974585 2975610 R COGs: COG2089 Sialic acid synthase; InterProIPR020030:IPR013785:IPR006190:IPR013132:IPR 013974; KEGG: abu:Abu_2246 N-acetylneuraminic acid synthetase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acylneuraminate-9-phosphate synthase; SPTR: A8EWY6 N-acetylneuraminic acid synthetase; TIGRFAM: pseudaminic acid synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase; pseudaminic acid synthase complement(2974585..2975610) Arcobacter nitrofigilis DSM 7299 9173146 YP_003657106.1 CDS Arnit_2951 NC_014166.1 2975642 2976355 R COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR020039:IPR003329; KEGG: abu:Abu_2245 acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: A8EWY5 Acylneuraminate cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase; PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase; pseudaminic acid CMP-transferase complement(2975642..2976355) Arcobacter nitrofigilis DSM 7299 9173147 YP_003657107.1 CDS Arnit_2952 NC_014166.1 2976348 2977478 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterProIPR000653:IPR020026:IPR015421:IPR015422:IPR 015424; KEGG: abu:Abu_2244 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8EWY4 DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase complement(2976348..2977478) Arcobacter nitrofigilis DSM 7299 9173148 YP_003657108.1 CDS Arnit_2953 NC_014166.1 2977485 2978477 R COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR020025:IPR016040:IPR003869; KEGG: abu:Abu_2243 UDP GlcNAc dehydratase/reductase PseB, putative; PFAM: polysaccharide biosynthesis protein CapD; SPTR: A8EWY3 UDP GlcNAc dehydratase/reductase PseB, putative; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; UDP-N-acetylglucosamine 4,6-dehydratase complement(2977485..2978477) Arcobacter nitrofigilis DSM 7299 9173149 YP_003657109.1 CDS Arnit_2954 NC_014166.1 2978582 2978794 D KEGG: abu:Abu_2242 hypothetical protein; SPTR: A8EWY2 Putative uncharacterized protein; hypothetical protein 2978582..2978794 Arcobacter nitrofigilis DSM 7299 9173150 YP_003657110.1 CDS Arnit_2955 NC_014166.1 2978880 2979920 D COGs: COG0468 RecA/RadA recombinase; InterProIPR020584:IPR013765:IPR001553:IPR020588:IPR 020587:IPR003593; KEGG: abu:Abu_2241 recombinase A; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: A8EWY1 Protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; recombination protein RecA 2978880..2979920 Arcobacter nitrofigilis DSM 7299 9173151 YP_003657111.1 CDS Arnit_2956 NC_014166.1 2980072 2981346 D COGs: COG0148 Enolase; InterPro IPR020809:IPR000941:IPR020811:IPR020810; KEGG: abu:Abu_2240 phosphopyruvate hydratase; PFAM: Enolase-like; PRIAM: Phosphopyruvate hydratase; SPTR: A8EWY0 Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase 2980072..2981346 Arcobacter nitrofigilis DSM 7299 9173152 YP_003657112.1 CDS Arnit_2957 NC_014166.1 2981359 2981616 D InterPro IPR007060; KEGG: abu:Abu_2239 hypothetical protein; PFAM: Septum formation initiator; SPTR: A8EWX9 Putative uncharacterized protein; PFAM: Septum formation initiator; septum formation initiator 2981359..2981616 Arcobacter nitrofigilis DSM 7299 9173153 YP_003657113.1 CDS Arnit_2958 NC_014166.1 2981613 2982419 D KEGG: abu:Abu_2238 hypothetical protein; SPTR: A8EWX8 Putative uncharacterized protein; hypothetical protein 2981613..2982419 Arcobacter nitrofigilis DSM 7299 9173154 YP_003657114.1 CDS Arnit_2959 NC_014166.1 2982393 2983550 R COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: tdn:Suden_0168 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; SPTR: Q30U82 Sodium/hydrogen exchanger; PFAM: Sodium/hydrogen exchanger family; sodium/hydrogen exchanger complement(2982393..2983550) Arcobacter nitrofigilis DSM 7299 9173155 YP_003657115.1 CDS Arnit_2960 NC_014166.1 2983564 2984424 R COGs: COG0502 Biotin synthase; InterProIPR002684:IPR013785:IPR006638:IPR007197:IPR 010722; KEGG: abu:Abu_2237 biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EWX7 Biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; biotin synthase complement(2983564..2984424) Arcobacter nitrofigilis DSM 7299 9173156 YP_003657116.1 CDS Arnit_2961 NC_014166.1 2984411 2984926 R COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: abu:Abu_2236 hypothetical protein; PFAM: metallophosphoesterase; SPTR: A8EWX6 Putative uncharacterized protein; TIGRFAM: phosphodiesterase, MJ0936 family; TIGRFAM: phosphoesterase, MJ0936 family; phosphodiesterase complement(2984411..2984926) Arcobacter nitrofigilis DSM 7299 9173157 YP_003657117.1 CDS Arnit_2962 NC_014166.1 2984929 2987322 R COGs: COG0550 Topoisomerase IA; InterProIPR005733:IPR000380:IPR013824:IPR013826:IPR 006154:IPR003601:IPR003602:IPR006171:IPR013497; KEGG: abu:Abu_2235 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; SPTR: A8EWX5 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; DNA topoisomerase I complement(2984929..2987322) Arcobacter nitrofigilis DSM 7299 9173158 YP_003657118.1 CDS Arnit_2963 NC_014166.1 2987412 2988191 R COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterPro IPR003170:IPR016169:IPR011601:IPR016166; KEGG: abu:Abu_2234 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: A8EWX4 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(2987412..2988191) Arcobacter nitrofigilis DSM 7299 9173159 YP_003657119.1 CDS Arnit_2964 NC_014166.1 2988208 2989071 R COGs: COG2107 periplasmic solute-binding protein; InterPro IPR003794; KEGG: abu:Abu_2233 hypothetical protein; PFAM: protein of unknown function DUF191; SPTR: A8EWX3 Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178); hypothetical protein complement(2988208..2989071) Arcobacter nitrofigilis DSM 7299 9173160 YP_003657120.1 CDS Arnit_2965 NC_014166.1 2989219 2989623 D InterPro IPR018247:IPR018249; KEGG: cps:CPS_2228 hypothetical protein; SPTR: Q482R4 Putative uncharacterized protein; hypothetical protein 2989219..2989623 Arcobacter nitrofigilis DSM 7299 9173161 YP_003657121.1 CDS Arnit_2966 NC_014166.1 2989662 2991143 R COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096:IPR001750; KEGG: wsu:WS0488 NADH dehydrogenase subunit N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Q7MA37 NADH-UBIQUINONE OXIDOREDUCTASE, NQO14 SUBUNIT NQO14; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N complement(2989662..2991143) Arcobacter nitrofigilis DSM 7299 9173162 YP_003657122.1 CDS Arnit_2967 NC_014166.1 2991143 2992669 R COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227:IPR003918:IPR001750; KEGG: tdn:Suden_1816 NADH dehydrogenase subunit M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: B6BI66 Donor-ubiquinone reductase I; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit M complement(2991143..2992669) Arcobacter nitrofigilis DSM 7299 9173163 YP_003657123.1 CDS Arnit_2968 NC_014166.1 2992683 2994614 R COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003945:IPR003916:IPR018393:IPR001516:IPR 001750:IPR010934; KEGG: nis:NIS_0300 NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH dehydrogenase subunit 5 domain protein; SPTR: A6Q1Q5 NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH dehydrogenase subunit 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; proton-translocating NADH-quinone oxidoreductase subunit L complement(2992683..2994614) Arcobacter nitrofigilis DSM 7299 9173164 YP_003657124.1 CDS Arnit_2969 NC_014166.1 2994615 2994914 R COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: sun:SUN_2221 NADH dehydrogenase subunit K; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: A6QCF2 NADH-quinone oxidoreductase, chain K; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit 4L complement(2994615..2994914) Arcobacter nitrofigilis DSM 7299 9173165 YP_003657125.1 CDS Arnit_2970 NC_014166.1 2994911 2995483 R COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: tdn:Suden_1819 NADH dehydrogenase subunit J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: Q30PI8 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 complement(2994911..2995483) Arcobacter nitrofigilis DSM 7299 9173166 YP_003657126.1 CDS Arnit_2971 NC_014166.1 2995492 2996115 R COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterProIPR017900:IPR010226:IPR009051:IPR017896:IPR 001450; KEGG: sun:SUN_2223 NADH dehydrogenase subunit I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6QCF4 NADH-quinone oxidoreductase, chain I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-quinone oxidoreductase subunit I complement(2995492..2996115) Arcobacter nitrofigilis DSM 7299 9173167 YP_003657127.1 CDS Arnit_2972 NC_014166.1 2996112 2997119 R COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086:IPR001694; KEGG: nis:NIS_0296 NADH dehydrogenase subunit H; PFAM: respiratory-chain NADH dehydrogenase subunit 1; PRIAM: NADH dehydrogenase (quinone); SPTR: A6Q1Q1 NADH-quinone oxidoreductase subunit H; PFAM: NADH dehydrogenase; NADH dehydrogenase complement(2996112..2997119) Arcobacter nitrofigilis DSM 7299 9173168 YP_003657128.1 CDS Arnit_2973 NC_014166.1 2997121 2999595 R COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR017900:IPR001041:IPR017896:IPR019574:IPR 001450; KEGG: nis:NIS_0295 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6Q1Q0 NADH-quinone oxidoreductase, chain G; PFAM: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain; NADH:ubiquinone oxidoreductase subunit G complement(2997121..2999595) Arcobacter nitrofigilis DSM 7299 9173169 YP_003657129.1 CDS Arnit_2974 NC_014166.1 2999592 3000401 R KEGG: abu:Abu_2232 hypothetical protein; SPTR: A8EWX2 Putative uncharacterized protein; hypothetical protein complement(2999592..3000401) Arcobacter nitrofigilis DSM 7299 9173170 YP_003657130.1 CDS Arnit_2975 NC_014166.1 3000391 3000687 R KEGG: sun:SUN_2228 hypothetical protein; SPTR: A6QCF9 Putative uncharacterized protein; hypothetical protein complement(3000391..3000687) Arcobacter nitrofigilis DSM 7299 9173171 YP_003657131.1 CDS Arnit_2976 NC_014166.1 3000699 3001925 R COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR010219:IPR001135; KEGG: nis:NIS_0291 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: C1ZYJ9 NADH dehydrogenase subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH dehydrogenase I subunit D complement(3000699..3001925) Arcobacter nitrofigilis DSM 7299 9173172 YP_003657132.1 CDS Arnit_2977 NC_014166.1 3001929 3002750 R COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR020396:IPR010218:IPR001268; KEGG: tdn:Suden_1827 NADH dehydrogenase subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: Q30PI0 NADH-quinone oxidoreductase; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; NADH (or F420H2) dehydrogenase subunit C complement(3001929..3002750) Arcobacter nitrofigilis DSM 7299 9173173 YP_003657133.1 CDS Arnit_2978 NC_014166.1 3002750 3003259 R COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006138:IPR006137; KEGG: nis:NIS_0289 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: C1ZYK1 NADH dehydrogenase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH-quinone oxidoreductase subunit B complement(3002750..3003259) Arcobacter nitrofigilis DSM 7299 9173174 YP_003657134.1 CDS Arnit_2979 NC_014166.1 3003241 3003630 R COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: sun:SUN_2232 NADH dehydrogenase subunit A; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: A6QCG3 NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 complement(3003241..3003630) Arcobacter nitrofigilis DSM 7299 9173175 YP_003657135.1 CDS Arnit_2980 NC_014166.1 3004085 3005818 R COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: abu:Abu_2231 AAA ATPase family protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A8EWX1 AAA family ATPase; PFAM: ATPase family associated with various cellular activities (AAA); AAA ATPase complement(3004085..3005818) Arcobacter nitrofigilis DSM 7299 9173176 YP_003657136.1 CDS Arnit_2981 NC_014166.1 3005907 3006263 R KEGG: abu:Abu_2230 hypothetical protein; SPTR: A8EWX0 Putative uncharacterized protein; hypothetical protein complement(3005907..3006263) Arcobacter nitrofigilis DSM 7299 9173177 YP_003657137.1 CDS Arnit_2982 NC_014166.1 3006396 3006968 R KEGG: hpy:HP1520 hypothetical protein; SPTR: O26049 Putative uncharacterized protein; hypothetical protein complement(3006396..3006968) Arcobacter nitrofigilis DSM 7299 9173178 YP_003657138.1 CDS Arnit_2983 NC_014166.1 3007556 3008245 R KEGG: conserved hypothetical protein; SPTR: Q8IJP4 Conserved protein; hypothetical protein complement(3007556..3008245) Arcobacter nitrofigilis DSM 7299 9173179 YP_003657139.1 CDS Arnit_2984 NC_014166.1 3008242 3009120 R InterPro IPR007637; KEGG: mja:MJ0600 restriction enzyme, type II R/M system 2; PFAM: DpmII restriction endonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Q58017 Type-2 restriction enzyme MjaIII; PFAM: DpnII restriction endonuclease; type II site-specific deoxyribonuclease complement(3008242..3009120) Arcobacter nitrofigilis DSM 7299 9173180 YP_003657140.1 CDS Arnit_2985 NC_014166.1 3009122 3010792 R InterPro IPR004919:IPR011089; KEGG: amr:AM1_1270 hypothetical protein; PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; SPTR: C2TXK4 Putative uncharacterized protein; PFAM: Protein of unknown function DUF262; Protein of unknown function (DUF1524); hypothetical protein complement(3009122..3010792) Arcobacter nitrofigilis DSM 7299 9173181 YP_003657141.1 CDS Arnit_2986 NC_014166.1 3010879 3011739 R COGs: COG0338 Site-specific DNA methylase; InterPro IPR002052:IPR012326:IPR002294:IPR012327; KEGG: gtn:GTNG_2051 putative adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: C7LLT2 GATC--recognizing Type II restriction modification system (MmyCV) adenine DNA methyltransferase subunit; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); DNA adenine methylase complement(3010879..3011739) Arcobacter nitrofigilis DSM 7299 9173182 YP_003657142.1 CDS Arnit_2987 NC_014166.1 3011821 3012612 D COGs: COG0863 DNA modification methylase; InterPro IPR002052:IPR001091:IPR002941; KEGG: rsd:TGRD_745 DNA modification methylase; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: B1GYY5 DNA modification methylase; PFAM: DNA methylase; DNA methylase N-4/N-6 domain-containing protein 3011821..3012612 Arcobacter nitrofigilis DSM 7299 9173183 YP_003657143.1 CDS Arnit_2988 NC_014166.1 3012618 3013331 R KEGG: eel:EUBELI_01769 hypothetical protein; SPTR: C6QVD8 Putative uncharacterized protein; hypothetical protein complement(3012618..3013331) Arcobacter nitrofigilis DSM 7299 9173184 YP_003657144.1 CDS Arnit_2989 NC_014166.1 3013542 3014387 R COGs: COG0648 Endonuclease IV; InterPro IPR018246:IPR001719:IPR013022:IPR012307; KEGG: abu:Abu_2221 endonuclease IV; PFAM: Xylose isomerase domain protein TIM barrel; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: A8EWW1 Probable endonuclease 4; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1); apurinic endonuclease Apn1 complement(3013542..3014387) Arcobacter nitrofigilis DSM 7299 9173185 YP_003657145.1 CDS Arnit_2990 NC_014166.1 3014559 3016250 D COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: cps:CPS_4690 L-lactate permease; PFAM: L-lactate permease; SPTR: Q47V38 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; TIGRFAM: L-lactate transport; L-lactate transport 3014559..3016250 Arcobacter nitrofigilis DSM 7299 9173186 YP_003657146.1 CDS Arnit_2991 NC_014166.1 3016284 3016706 R KEGG: RabGAP/TBC domain-containing protein; SPTR: Q54YR7 RabGAP/TBC domain-containing protein; hypothetical protein complement(3016284..3016706) Arcobacter nitrofigilis DSM 7299 9173187 YP_003657147.1 CDS Arnit_2992 NC_014166.1 3016852 3019263 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Cache sensor domaining-containing methyl-accepting chemotaxis sensory transducer complement(3016852..3019263) Arcobacter nitrofigilis DSM 7299 9173188 YP_003657148.1 CDS Arnit_2993 NC_014166.1 3019484 3020047 D COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR012349:IPR009002; KEGG: abu:Abu_1936 hypothetical protein; SPTR: A8EW35 Putative uncharacterized protein; PFAM: Flavin reductase like domain; hypothetical protein 3019484..3020047 Arcobacter nitrofigilis DSM 7299 9173189 YP_003657149.1 CDS Arnit_2994 NC_014166.1 3020044 3021441 R COGs: COG0114 Fumarase; InterProIPR020557:IPR005677:IPR000362:IPR008948:IPR 018951; KEGG: abu:Abu_0719 fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like; SPTR: A8ESR0 Fumarate hydratase, class II; TIGRFAM: fumarate hydratase, class II; PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II; fumarate hydratase complement(3020044..3021441) Arcobacter nitrofigilis DSM 7299 9173190 YP_003657150.1 CDS Arnit_2995 NC_014166.1 3021502 3022344 R KEGG: abu:Abu_1929 hypothetical protein; SPTR: A8EW28 Putative uncharacterized protein; hypothetical protein complement(3021502..3022344) Arcobacter nitrofigilis DSM 7299 9173191 YP_003657151.1 CDS Arnit_2996 NC_014166.1 3022602 3023585 R COGs: COG2301 Citrate lyase beta subunit; InterPro IPR011206:IPR015813; KEGG: abu:Abu_1927 putative citrate lyase; SPTR: A8EW26 Putative citrate lyase; PFAM: HpcH/HpaI aldolase/citrate lyase family; putative citrate lyase complement(3022602..3023585) Arcobacter nitrofigilis DSM 7299 9173192 YP_003657152.1 CDS Arnit_2997 NC_014166.1 3023606 3024670 R COGs: COG2030 Acyl dehydratase; InterPro IPR016790:IPR002539; KEGG: abu:Abu_1926 MaoC family protein; PFAM: MaoC domain protein dehydratase; SPTR: A8EW25 MaoC family protein; PFAM: MaoC like domain; MaoC domain-containing protein dehydratase complement(3023606..3024670) Arcobacter nitrofigilis DSM 7299 9173193 YP_003657153.1 CDS Arnit_2998 NC_014166.1 3024680 3027199 R COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR020845:IPR015813:IPR000873:IPR005000; KEGG: abu:Abu_1925 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; HpcH/HpaI aldolase; SPTR: A8EW24 AMP-dependent synthetase and ligase; PFAM: HpcH/HpaI aldolase/citrate lyase family; AMP-binding enzyme; AMP-dependent synthetase and ligase complement(3024680..3027199) Arcobacter nitrofigilis DSM 7299 9173194 YP_003657154.1 CDS Arnit_2999 NC_014166.1 3027212 3028345 R COGs: COG2301 Citrate lyase beta subunit; InterPro IPR011206:IPR015813:IPR005000; KEGG: abu:Abu_1924 hypothetical protein; PFAM: HpcH/HpaI aldolase; SPTR: A8EW23 Putative uncharacterized protein; PFAM: HpcH/HpaI aldolase/citrate lyase family; HpcH/HpaI aldolase complement(3027212..3028345) Arcobacter nitrofigilis DSM 7299 9173195 YP_003657155.1 CDS Arnit_3000 NC_014166.1 3028696 3029421 D COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: gwc:GWCH70_1911 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SPTR: A4BYY8 Transcriptional regulator, IclR family protein; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; IclR family transcriptional regulator 3028696..3029421 Arcobacter nitrofigilis DSM 7299 9173196 YP_003657156.1 CDS Arnit_3001 NC_014166.1 3029418 3029804 R KEGG: abu:Abu_2219 hypothetical protein; SPTR: A8EWV9 Putative uncharacterized protein; hypothetical protein complement(3029418..3029804) Arcobacter nitrofigilis DSM 7299 9173197 YP_003657157.1 CDS Arnit_3002 NC_014166.1 3029979 3031022 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR009082:IPR005467:IPR 003661; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EV12 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 3029979..3031022 Arcobacter nitrofigilis DSM 7299 9173198 YP_003657158.1 CDS Arnit_3003 NC_014166.1 3031115 3032188 D COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: abu:Abu_2218 hypothetical protein; PFAM: protein of unknown function DUF208; SPTR: A8EWV8 Putative uncharacterized protein; PFAM: Uncharacterized BCR, COG1636; hypothetical protein 3031115..3032188 Arcobacter nitrofigilis DSM 7299 9173199 YP_003657159.1 CDS Arnit_3004 NC_014166.1 3032189 3033232 D COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: abu:Abu_2217 ipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: A8EWV7 Lipid A disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; lipid-A-disaccharide synthase 3032189..3033232 Arcobacter nitrofigilis DSM 7299 9173200 YP_003657160.1 CDS Arnit_3005 NC_014166.1 3033285 3033728 D COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR010084:IPR013114; KEGG: abu:Abu_2216 3-hydroxymyristoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: A8EWV6 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3033285..3033728 Arcobacter nitrofigilis DSM 7299 9173201 YP_003657161.1 CDS Arnit_3006 NC_014166.1 3033736 3034524 D COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR018357:IPR010137:IPR011004:IPR001451; KEGG: abu:Abu_2215 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR: A8EWV5 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 3033736..3034524 Arcobacter nitrofigilis DSM 7299 9173202 YP_003657162.1 CDS Arnit_3007 NC_014166.1 3034530 3035753 D COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR002078:IPR004487:IPR003593:IPR010603:IPR 013093:IPR019489; KEGG: abu:Abu_2214 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8EWV4 ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); sigma 54 interacting domain-containing protein 3034530..3035753 Arcobacter nitrofigilis DSM 7299 9173203 YP_003657163.1 CDS Arnit_3008 NC_014166.1 3035775 3036806 D COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: abu:Abu_2213 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: A8EWV3 Rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; MreB/Mrl family cell shape determining protein 3035775..3036806 Arcobacter nitrofigilis DSM 7299 9173204 YP_003657164.1 CDS Arnit_3009 NC_014166.1 3036835 3037569 D COGs: COG1792 Cell shape-determining protein; KEGG: abu:Abu_2212 rod shape-determining protein MreC; SPTR: A8EWV2 Rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC; rod shape-determining protein MreC 3036835..3037569 Arcobacter nitrofigilis DSM 7299 9173205 YP_003657165.1 CDS Arnit_3010 NC_014166.1 3037629 3039635 D COGs: COG2200 FOG: EAL domain; InterPro IPR011006:IPR001789:IPR001633:IPR000160; KEGG: wsu:WS0108 GGDEF family protein; PFAM: EAL domain protein; response regulator receiver; GGDEF domain containing protein; SMART: EAL domain protein; response regulator receiver; GGDEF domain containing protein; SPTR: Q7MAP6 GGDEF FAMILY PROTEIN; PFAM: EAL domain; GGDEF domain; Response regulator receiver domain; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 3037629..3039635 Arcobacter nitrofigilis DSM 7299 9173206 YP_003657166.1 CDS Arnit_3011 NC_014166.1 3039638 3041332 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR009082:IPR005467; KEGG: nam:NAMH_0558 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B6BGM8 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 3039638..3041332 Arcobacter nitrofigilis DSM 7299 9173207 YP_003657167.1 CDS Arnit_3012 NC_014166.1 3041324 3041941 R COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783:IPR017938; KEGG: abu:Abu_2211 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: A8EWV1 Riboflavin synthase, alpha subunit; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha complement(3041324..3041941) Arcobacter nitrofigilis DSM 7299 9173208 YP_003657168.1 CDS Arnit_3013 NC_014166.1 3042115 3044007 D COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR020595:IPR004416:IPR013027:IPR002218; KEGG: abu:Abu_2210 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: glucose-inhibited division protein A; SPTR: A8EWV0 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: glucose inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; glucose inhibited division protein A 3042115..3044007 Arcobacter nitrofigilis DSM 7299 9173209 YP_003657169.1 CDS Arnit_3014 NC_014166.1 3044055 3044486 R InterPro IPR013784; KEGG: saf:SULAZ_0740 hypothetical protein; SPTR: C1DUD8 Putative uncharacterized protein; hypothetical protein complement(3044055..3044486) Arcobacter nitrofigilis DSM 7299 9173210 YP_003657170.1 CDS Arnit_3015 NC_014166.1 3044488 3045180 R InterPro IPR019613; KEGG: cyt:cce_4827 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: B1X214 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region; nickel transport complex subunit NikM complement(3044488..3045180) Arcobacter nitrofigilis DSM 7299 9173211 YP_003657171.1 CDS Arnit_3016 NC_014166.1 3045330 3047852 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_1831 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8EVU8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(3045330..3047852) Arcobacter nitrofigilis DSM 7299 9173212 YP_003657172.1 CDS Arnit_3017 NC_014166.1 3048015 3049268 R KEGG: viral A-type inclusion protein ; K02331 DNA polymerase phi subunit; SPTR: A2FSZ8 Viral A-type inclusion protein, putative; hypothetical protein complement(3048015..3049268) Arcobacter nitrofigilis DSM 7299 9173213 YP_003657173.1 CDS Arnit_3018 NC_014166.1 3049556 3050275 D KEGG: conserved hypothetical protein; SPTR: Q8I3F7 Putative uncharacterized protein; hypothetical protein 3049556..3050275 Arcobacter nitrofigilis DSM 7299 9173214 YP_003657174.1 CDS Arnit_3019 NC_014166.1 3050345 3050617 R KEGG: mfa:Mfla_1690 hypothetical protein; SPTR: A6GTJ6 Putative uncharacterized protein; hypothetical protein complement(3050345..3050617) Arcobacter nitrofigilis DSM 7299 9173215 YP_003657175.1 CDS Arnit_3020 NC_014166.1 3050752 3052131 R KEGG: bpu:BPUM_3698 hypothetical protein; SPTR: C5RDX9 Putative uncharacterized protein; hypothetical protein complement(3050752..3052131) Arcobacter nitrofigilis DSM 7299 9173216 YP_003657176.1 CDS Arnit_3021 NC_014166.1 3052346 3053380 D COGs: COG1858 Cytochrome c peroxidase; InterPro IPR009056:IPR004852; KEGG: abu:Abu_2140 cytochrome c551 peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: A8EWN1 Cytochrome c551 peroxidase; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 3052346..3053380 Arcobacter nitrofigilis DSM 7299 9173217 YP_003657177.1 CDS Arnit_3022 NC_014166.1 3053427 3053903 R InterPro IPR000835:IPR011991; KEGG: abu:Abu_0816 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A8ET07 Putative transcriptional regulator (MarR family); PFAM: MarR family; MarR family transcriptional regulator complement(3053427..3053903) Arcobacter nitrofigilis DSM 7299 9173218 YP_003657178.1 CDS Arnit_3023 NC_014166.1 3054000 3055232 D COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0815 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A8ET06 Outer membrane efflux protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein 3054000..3055232 Arcobacter nitrofigilis DSM 7299 9173219 YP_003657179.1 CDS Arnit_3024 NC_014166.1 3055229 3056302 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR018120; KEGG: abu:Abu_0814 multidrug efflux RND membrane fusion protein; PFAM: secretion protein HlyD family protein; SPTR: A8ET05 Multidrug efflux RND membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter 3055229..3056302 Arcobacter nitrofigilis DSM 7299 9173220 YP_003657180.1 CDS Arnit_3025 NC_014166.1 3056304 3059432 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: tdn:Suden_0536 resistance-nodulation-cell division family transporter; PFAM: acriflavin resistance protein; SPTR: Q30T66 Resistance-Nodulation-Cell Division Superfamily transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux transporter 3056304..3059432 Arcobacter nitrofigilis DSM 7299 9173221 YP_003657181.1 CDS Arnit_3026 NC_014166.1 3059534 3060379 D KEGG: nis:NIS_1586 hypothetical protein; SPTR: A6Q5D4 Putative uncharacterized protein; hypothetical protein 3059534..3060379 Arcobacter nitrofigilis DSM 7299 9173222 YP_003657182.1 CDS Arnit_3027 NC_014166.1 3060481 3061890 D COGs: COG0348 Polyferredoxin; InterPro IPR014116:IPR017900:IPR017896; KEGG: abu:Abu_2256 4Fe-4S ferredoxin, iron-sulfur binding; SPTR: A8EWZ6 4Fe-4S ferredoxin, iron-sulfur binding; TIGRFAM: cytochrome c oxidase accessory protein CcoG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; cytochrome c oxidase accessory protein CcoG 3060481..3061890 Arcobacter nitrofigilis DSM 7299 9173223 YP_003657183.1 CDS Arnit_3028 NC_014166.1 3062020 3063636 D COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR004468:IPR017926:IPR017456:IPR000991; KEGG: abu:Abu_2257 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: A8EWZ7 CTP synthetase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 3062020..3063636 Arcobacter nitrofigilis DSM 7299 9173224 YP_003657184.1 CDS Arnit_3029 NC_014166.1 3063636 3065198 D COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610:IPR001667:IPR003156; KEGG: abu:Abu_2258 single-stranded DNA-specific exonuclease; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: A8EWZ8 Single-stranded DNA-specific exonuclease; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 3063636..3065198 Arcobacter nitrofigilis DSM 7299 9173225 YP_003657185.1 CDS Arnit_3030 NC_014166.1 3065193 3065750 R KEGG: abu:Abu_2259 hypothetical protein; SPTR: A8EWZ9 Putative uncharacterized protein; hypothetical protein complement(3065193..3065750) Arcobacter nitrofigilis DSM 7299 9173226 YP_003657186.1 CDS Arnit_3031 NC_014166.1 3065784 3066455 R KEGG: abu:Abu_2260 hypothetical protein; SPTR: A8EX00 Putative uncharacterized protein; hypothetical protein complement(3065784..3066455) Arcobacter nitrofigilis DSM 7299 9173227 YP_003657187.1 CDS Arnit_3032 NC_014166.1 3066641 3067192 D COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006287:IPR002818; KEGG: abu:Abu_2261 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein ThiJ; PFAM: ThiJ/PfpI domain protein; SPTR: A8EX01 4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein ThiJ; TIGRFAM: DJ-1 family protein; PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; DJ-1 family protein 3066641..3067192 Arcobacter nitrofigilis DSM 7299 9173228 YP_003657188.1 CDS Arnit_3033 NC_014166.1 3067200 3067775 R KEGG: mag:amb4390 hypothetical protein; SPTR: B6BI16 Putative uncharacterized protein; hypothetical protein complement(3067200..3067775) Arcobacter nitrofigilis DSM 7299 9173229 YP_003657189.1 CDS Arnit_3034 NC_014166.1 3067823 3069940 D COGs: COG4252 transmembrane sensor domain; InterPro IPR001054:IPR007890; KEGG: abu:Abu_0928 adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: A8ETB4 Adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain; Chase sensor domain-containing adenylate/guanylate cyclase 3067823..3069940 Arcobacter nitrofigilis DSM 7299 9173230 YP_003657190.1 CDS Arnit_3035 NC_014166.1 3069862 3071079 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: wsu:WS1723 alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol; PFAM: glycosyl transferase group 1; SPTR: Q7M8D1 ALPHA-D-MANNOSE-ALPHA(1-6)PHOSPHATIDYL MYO-INOSITO; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(3069862..3071079) Arcobacter nitrofigilis DSM 7299 9173231 YP_003657191.1 CDS Arnit_3036 NC_014166.1 3071162 3071890 D COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: wsu:WS1724 hypothetical protein; PFAM: metallophosphoesterase; SPTR: A6DDM1 Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 3071162..3071890 Arcobacter nitrofigilis DSM 7299 9173232 YP_003657192.1 CDS Arnit_3037 NC_014166.1 3071896 3072651 D COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: aae:aq_1386 hypothetical protein; PFAM: Patatin; SPTR: C1ZZD1 Predicted esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase; patatin 3071896..3072651 Arcobacter nitrofigilis DSM 7299 9173233 YP_003657193.1 CDS Arnit_3038 NC_014166.1 3072703 3076245 D COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805:IPR003141:IPR016195:IPR004013:IPR 011708:IPR004365; KEGG: abu:Abu_2262 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; SPTR: A8EX02 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha 3072703..3076245 Arcobacter nitrofigilis DSM 7299 9173234 YP_003657194.1 CDS Arnit_3039 NC_014166.1 3076245 3077033 D COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: abu:Abu_2263 stationary phase survival protein SurE; PFAM: Survival protein SurE; PRIAM: 5'-nucleotidase; SPTR: A8EX03 5'-nucleotidase surE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; stationary-phase survival protein SurE 3076245..3077033 Arcobacter nitrofigilis DSM 7299 9173235 YP_003657195.1 CDS Arnit_3040 NC_014166.1 3077039 3077299 D KEGG: abu:Abu_2264 hypothetical protein; SPTR: A8EX04 Putative uncharacterized protein; hypothetical protein 3077039..3077299 Arcobacter nitrofigilis DSM 7299 9173236 YP_003657196.1 CDS Arnit_3041 NC_014166.1 3077304 3078680 R KEGG: cff:CFF8240_0214 hypothetical protein; SPTR: B6BLV6 Putative uncharacterized protein; hypothetical protein complement(3077304..3078680) Arcobacter nitrofigilis DSM 7299 9173237 YP_003657197.1 CDS Arnit_3043 NC_014166.1 3079490 3079753 R InterPro IPR020281; KEGG: abu:Abu_2265 hypothetical protein; SPTR: A8EX05 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF493); hypothetical protein complement(3079490..3079753) Arcobacter nitrofigilis DSM 7299 9173239 YP_003657198.1 CDS Arnit_3044 NC_014166.1 3079750 3080220 R COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: tdn:Suden_2020 molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; SPTR: B6BGP7 Molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; molybdenum cofactor biosynthesis protein C complement(3079750..3080220) Arcobacter nitrofigilis DSM 7299 9173240 YP_003657199.1 CDS Arnit_3045 NC_014166.1 3080336 3080548 D InterPro IPR001911:IPR018278; KEGG: abu:Abu_2267 30S ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: A8EX07 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 3080336..3080548 Arcobacter nitrofigilis DSM 7299 9173241 YP_003657200.1 CDS Arnit_3046 NC_014166.1 3080775 3082241 D COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR000883; KEGG: abu:Abu_2081 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: A8EWH5 Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cbb3-type cytochrome c oxidase subunit I 3080775..3082241 Arcobacter nitrofigilis DSM 7299 9173242 YP_003657201.1 CDS Arnit_3047 NC_014166.1 3082257 3082940 D COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468:IPR009056; KEGG: abu:Abu_2080 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: A8EWH4 Cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cbb3-type cytochrome c oxidase subunit II 3082257..3082940 Arcobacter nitrofigilis DSM 7299 9173243 YP_003657202.1 CDS Arnit_3048 NC_014166.1 3082950 3083174 D InterPro IPR014107; KEGG: abu:Abu_2079 cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cytochrome c oxidase cbb3-type CcoQ; SPTR: A8EWH3 Cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cbb3-type cytochrome oxidase component FixQ; TIGRFAM: cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial; cbb3-type cytochrome c oxidase ccoQ 3082950..3083174 Arcobacter nitrofigilis DSM 7299 9173244 YP_003657203.1 CDS Arnit_3049 NC_014166.1 3086841 3086990 R hypothetical protein complement(3086841..3086990) Arcobacter nitrofigilis DSM 7299 9173248 YP_003657204.1 CDS Arnit_3050 NC_014166.1 3089337 3090032 D COGs: COG0670 Integral membrane protein interacts with FtsH; InterPro IPR006214; KEGG: abu:Abu_2273 hypothetical protein; PFAM: protein of unknown function UPF0005; SPTR: A8EX08 Conserved hypothetical integral membrane protein; PFAM: Uncharacterised protein family UPF0005; hypothetical protein 3089337..3090032 Arcobacter nitrofigilis DSM 7299 9173252 YP_003657205.1 CDS Arnit_3051 NC_014166.1 3090054 3090476 D KEGG: abu:Abu_2274 hypothetical protein; SPTR: A8EX09 Putative uncharacterized protein; hypothetical protein 3090054..3090476 Arcobacter nitrofigilis DSM 7299 9173254 YP_003657206.1 CDS Arnit_3052 NC_014166.1 3090428 3091120 R InterPro IPR013217; KEGG: abu:Abu_2275 putative methyltransferase; PFAM: Methyltransferase type 12; SPTR: A8EX10 Putative uncharacterized protein; PFAM: Methyltransferase domain; type 12 methyltransferase complement(3090428..3091120) Arcobacter nitrofigilis DSM 7299 9173255 YP_003657207.1 CDS Arnit_3053 NC_014166.1 3091191 3091577 D COGs: COG1314 Preprotein translocase subunit SecG; InterPro IPR004692; KEGG: abu:Abu_2276 protein-export membrane protein SecG; PFAM: Preprotein translocase SecG subunit; SPTR: A8EX11 Protein-export membrane protein SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; preprotein translocase subunit SecG 3091191..3091577 Arcobacter nitrofigilis DSM 7299 9173256 YP_003657208.1 CDS Arnit_3054 NC_014166.1 3091766 3092323 D COGs: COG0233 Ribosome recycling factor; InterPro IPR002661; KEGG: abu:Abu_2277 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: A8EX12 Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 3091766..3092323 Arcobacter nitrofigilis DSM 7299 9173257 YP_003657209.1 CDS Arnit_3055 NC_014166.1 3092326 3092934 D COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR006273:IPR000836; KEGG: abu:Abu_2278 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: A8EX13 Orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 3092326..3092934 Arcobacter nitrofigilis DSM 7299 9173258 YP_003657210.1 CDS Arnit_3056 NC_014166.1 3092941 3093426 D InterPro IPR010432; KEGG: abu:Abu_2279 hypothetical protein; PFAM: RDD domain containing protein; SPTR: A8EX14 Putative uncharacterized protein; PFAM: RDD family; RDD domain-containing protein 3092941..3093426 Arcobacter nitrofigilis DSM 7299 9173259 YP_003657211.1 CDS Arnit_3057 NC_014166.1 3093427 3094515 D InterPro IPR016196:IPR011701; KEGG: abu:Abu_2280 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8EX15 Putative major facilitator superfamily transporter; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 3093427..3094515 Arcobacter nitrofigilis DSM 7299 9173260 YP_003657212.1 CDS Arnit_3058 NC_014166.1 3094576 3097116 D COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: tdn:Suden_0909 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: Q30S44 Diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 3094576..3097116 Arcobacter nitrofigilis DSM 7299 9173261 YP_003657213.1 CDS Arnit_3059 NC_014166.1 3097127 3097864 R COGs: COG3022 conserved hypothetical protein; InterPro IPR005583; KEGG: abu:Abu_2282 hypothetical protein; PFAM: protein of unknown function DUF328; SPTR: A8EX17 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF328); hypothetical protein complement(3097127..3097864) Arcobacter nitrofigilis DSM 7299 9173262 YP_003657214.1 CDS Arnit_3060 NC_014166.1 3097872 3098288 R COGs: COG3012 conserved hypothetical protein; KEGG: abu:Abu_1170 hypothetical protein; SPTR: A8EU06 Putative uncharacterized protein; PFAM: SEC-C motif; hypothetical protein complement(3097872..3098288) Arcobacter nitrofigilis DSM 7299 9173263 YP_003657215.1 CDS Arnit_3061 NC_014166.1 3098307 3098672 R KEGG: abu:Abu_0959 hypothetical protein; SPTR: A8ETE5 Putative uncharacterized protein; hypothetical protein complement(3098307..3098672) Arcobacter nitrofigilis DSM 7299 9173264 YP_003657216.1 CDS Arnit_3062 NC_014166.1 3098784 3099176 D KEGG: pmo:Pmob_0456 hypothetical protein; SPTR: A9BFM2 Putative uncharacterized protein; hypothetical protein 3098784..3099176 Arcobacter nitrofigilis DSM 7299 9173265 YP_003657217.1 CDS Arnit_3063 NC_014166.1 3099173 3100345 D COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: dal:Dalk_4422 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C8QW83 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 3099173..3100345 Arcobacter nitrofigilis DSM 7299 9173266 YP_003657218.1 CDS Arnit_3064 NC_014166.1 3100413 3101807 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR016162:IPR015590; KEGG: abu:Abu_2148 aldehyde dehydrogenase family protein; PFAM: Aldehyde Dehydrogenase; SPTR: A8EWN9 Aldehyde dehydrogenase family protein; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(3100413..3101807) Arcobacter nitrofigilis DSM 7299 9173267 YP_003657219.1 CDS Arnit_3065 NC_014166.1 3101809 3103464 R COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766; KEGG: abu:Abu_2149 acetolactate synthase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; SPTR: A8EWP0 Acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate domain-containing TPP-binding protein complement(3101809..3103464) Arcobacter nitrofigilis DSM 7299 9173268 YP_003657220.1 CDS Arnit_3066 NC_014166.1 3103759 3104412 D COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834; KEGG: abu:Abu_2153 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8EWP4 Phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase 3103759..3104412 Arcobacter nitrofigilis DSM 7299 9173269 YP_003657221.1 CDS Arnit_3067 NC_014166.1 3104422 3105237 R KEGG: dal:Dalk_0467 hypothetical protein; SPTR: B6BH91 Putative uncharacterized protein; hypothetical protein complement(3104422..3105237) Arcobacter nitrofigilis DSM 7299 9173270 YP_003657222.1 CDS Arnit_3068 NC_014166.1 3105328 3105711 R KEGG: abu:Abu_2158 hypothetical protein; SPTR: A8EWP9 Putative uncharacterized protein; hypothetical protein complement(3105328..3105711) Arcobacter nitrofigilis DSM 7299 9173271 YP_003657223.1 CDS Arnit_3069 NC_014166.1 3105872 3108001 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR001638; KEGG: mmw:Mmwyl1_1889 diguanylate cyclase; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; extracellular solute-binding protein family 3; SPTR: A6VWI4 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain; extracellular sensor-containg diguanylate cyclase 3105872..3108001 Arcobacter nitrofigilis DSM 7299 9173272 YP_003657224.1 CDS Arnit_3070 NC_014166.1 3108014 3108358 D COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR011008:IPR007138; KEGG: dsa:Desal_0918 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q2BHQ5 Putative uncharacterized protein (Fragment); PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3108014..3108358 Arcobacter nitrofigilis DSM 7299 9173273 YP_003657225.1 CDS Arnit_3071 NC_014166.1 3108355 3108543 D KEGG: hypothetical protein; SPTR: Q8IL39 Putative uncharacterized protein; hypothetical protein 3108355..3108543 Arcobacter nitrofigilis DSM 7299 9173274 YP_003657226.1 CDS Arnit_3072 NC_014166.1 3108540 3109226 R COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR004552:IPR002123; KEGG: tdn:Suden_0310 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Q30TU0 Phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(3108540..3109226) Arcobacter nitrofigilis DSM 7299 9173275 YP_003657227.1 CDS Arnit_3073 NC_014166.1 3109374 3109739 R InterPro IPR008201; KEGG: nis:NIS_0575 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: C2A0W2 Uncharacterized conserved protein; PFAM: Protein of unknown function DUF86; hypothetical protein complement(3109374..3109739) Arcobacter nitrofigilis DSM 7299 9173276 YP_003657228.1 CDS Arnit_3074 NC_014166.1 3109732 3110022 R COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: dth:DICTH_1832 nucleotidyltransferase; PFAM: DNA polymerase beta domain protein region; SPTR: C2A0W1 Predicted nucleotidyltransferase; PFAM: Nucleotidyltransferase domain; DNA polymerase beta domain-containing protein complement(3109732..3110022) Arcobacter nitrofigilis DSM 7299 9173277 YP_003657229.1 CDS Arnit_3075 NC_014166.1 3110501 3111127 D KEGG: hypothetical protein; SPTR: A8UTP8 Putative uncharacterized protein; hypothetical protein 3110501..3111127 Arcobacter nitrofigilis DSM 7299 9173278 YP_003657230.1 CDS Arnit_3076 NC_014166.1 3111146 3111637 R KEGG: cdl:CDR20291_1475 putative membrane-associated ribonuclease; SPTR: Q186D2 Putative membrane-associated ribonuclease; hypothetical protein complement(3111146..3111637) Arcobacter nitrofigilis DSM 7299 9173279 YP_003657231.1 CDS Arnit_3077 NC_014166.1 3111639 3111908 R KEGG: fba:FIC_02416 molybdopterin oxidoreductase; SPTR: B9CR64 ABC transporter, permease protein; hypothetical protein complement(3111639..3111908) Arcobacter nitrofigilis DSM 7299 9173280 YP_003657232.1 CDS Arnit_3078 NC_014166.1 3112069 3113298 R COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: abu:Abu_2167 HI0933-like protein; PFAM: HI0933 family protein; SPTR: A8EWQ8 HI0933-like protein; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275; hypothetical protein complement(3112069..3113298) Arcobacter nitrofigilis DSM 7299 9173281 YP_003657233.1 CDS Arnit_3079 NC_014166.1 3113411 3114412 D COGs: COG0714 MoxR-like ATPase; InterPro IPR003593:IPR011704; KEGG: sun:SUN_1058 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: A6Q956 Putative uncharacterized protein; PFAM: AAA domain (dynein-related subfamily); ATPase 3113411..3114412 Arcobacter nitrofigilis DSM 7299 9173282 YP_003657234.1 CDS Arnit_3080 NC_014166.1 3114415 3115527 D COGs: COG3864 conserved hypothetical protein; InterPro IPR018698; KEGG: sun:SUN_1504 hypothetical protein; PFAM: Protein of unknown function DUF2201, metallopeptidase-related; SPTR: A6QAE6 Putative uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201); hypothetical protein 3114415..3115527 Arcobacter nitrofigilis DSM 7299 9173283 YP_003657235.1 CDS Arnit_3081 NC_014166.1 3115620 3116786 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: ypi:YpsIP31758_3586 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: C1ZZC5 RND family efflux transporter, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter 3115620..3116786 Arcobacter nitrofigilis DSM 7299 9173284 YP_003657236.1 CDS Arnit_3082 NC_014166.1 3116786 3119914 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: mmw:Mmwyl1_0997 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: acriflavin resistance protein; SPTR: A6VTZ9 Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux transporter 3116786..3119914 Arcobacter nitrofigilis DSM 7299 9173285 YP_003657237.1 CDS Arnit_3083 NC_014166.1 3119911 3121335 D COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: yen:YE0445 outer membrane efflux lipoprotein; PFAM: outer membrane efflux protein; SPTR: C1ZZC7 Efflux transporter, outer membrane factor lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 3119911..3121335 Arcobacter nitrofigilis DSM 7299 9173286 YP_003657238.1 CDS Arnit_3084 NC_014166.1 3121336 3121662 R InterPro IPR011051; KEGG: abu:Abu_2168 hypothetical protein; SPTR: A8EWQ9 Putative uncharacterized protein; PFAM: Cupin domain; hypothetical protein complement(3121336..3121662) Arcobacter nitrofigilis DSM 7299 9173287 YP_003657239.1 CDS Arnit_3085 NC_014166.1 3121877 3123145 D COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterProIPR006235:IPR000277:IPR015424:IPR015421:IPR 015422; KEGG: abu:Abu_2169 O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: O-acetylhomoserine aminocarboxypropyltransferase; SPTR: A8EWR0 O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; O-acetylhomoserine/O-acetylserine sulfhydrylase 3121877..3123145 Arcobacter nitrofigilis DSM 7299 9173288 YP_003657240.1 CDS Arnit_3086 NC_014166.1 3123156 3123569 D COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: abu:Abu_2170 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: A8EWR1 Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator); BadM/Rrf2 family transcriptional regulator 3123156..3123569 Arcobacter nitrofigilis DSM 7299 9173289 YP_003657241.1 CDS Arnit_3087 NC_014166.1 3123644 3124573 D COGs: COG0031 Cysteine synthase; InterPro IPR005856:IPR005859:IPR001216:IPR001926; KEGG: abu:Abu_2299 cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8EWR2 Cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase A 3123644..3124573 Arcobacter nitrofigilis DSM 7299 9173290 YP_003657242.1 CDS Arnit_3088 NC_014166.1 3124588 3124812 D InterPro IPR018638; KEGG: abu:Abu_2172 hypothetical protein; PFAM: Protein of unknown function DUF2061, membrane; SPTR: A8EWR3 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2061); hypothetical protein 3124588..3124812 Arcobacter nitrofigilis DSM 7299 9173291 YP_003657243.1 CDS Arnit_3089 NC_014166.1 3124821 3125522 D COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR004511:IPR011798:IPR014729:IPR002500; KEGG: abu:Abu_2173 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; PRIAM: Phosphoadenylyl-sulfate reductase (thioredoxin); SPTR: A8EWR4 Phosphoadenosine phosphosulfate reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); adenylylsulfate reductase 3124821..3125522 Arcobacter nitrofigilis DSM 7299 9173292 YP_003657244.1 CDS Arnit_3090 NC_014166.1 3125587 3126498 D COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR011784:IPR014729:IPR002500; KEGG: sun:SUN_1722 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: B6BKH1 Sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; sulfate adenylyltransferase 3125587..3126498 Arcobacter nitrofigilis DSM 7299 9173293 YP_003657245.1 CDS Arnit_3091 NC_014166.1 3126500 3127960 D COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterProIPR005225:IPR011779:IPR000795:IPR009001:IPR 009000; KEGG: sun:SUN_1721 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; PRIAM: Sulfate adenylyltransferase; SPTR: B6BKH2 Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase large subunit 3126500..3127960 Arcobacter nitrofigilis DSM 7299 9173294 YP_003657246.1 CDS Arnit_3092 NC_014166.1 3127986 3129575 D COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR006066:IPR005117:IPR006067; KEGG: tdn:Suden_0159 ferredoxin--nitrite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Sulfite reductase (ferredoxin); SPTR: B6BNF4 Sulfite reductase; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; sulfite reductase 3127986..3129575 Arcobacter nitrofigilis DSM 7299 9173295 YP_003657247.1 CDS Arnit_3093 NC_014166.1 3129544 3130848 D COGs: COG0520 Selenocysteine lyase; InterPro IPR015424:IPR015421:IPR000192; KEGG: abu:Abu_2178 aminotransferase, NifS-like protein; PFAM: aminotransferase class V; SPTR: A8EWR9 Aminotransferase, NifS-like protein; PFAM: Aminotransferase class-V; class V aminotransferase 3129544..3130848 Arcobacter nitrofigilis DSM 7299 9173296 YP_003657248.1 CDS Arnit_3094 NC_014166.1 3130938 3132752 D COGs: COG3211 phosphatase; InterPro IPR008557; KEGG: cha:CHAB381_0225 alkaline phosphatase; PFAM: protein of unknown function DUF839; SPTR: A7HZZ1 Alkaline phosphatase; PFAM: Bacterial protein of unknown function (DUF839); hypothetical protein 3130938..3132752 Arcobacter nitrofigilis DSM 7299 9173297 YP_003657249.1 CDS Arnit_3095 NC_014166.1 3132762 3133970 D COGs: COG4222 conserved hypothetical protein; KEGG: hna:Hneap_2391 hypothetical protein; SPTR: A7C1S5 Putative uncharacterized protein; hypothetical protein 3132762..3133970 Arcobacter nitrofigilis DSM 7299 9173298 YP_003657250.1 CDS Arnit_3096 NC_014166.1 3133970 3135643 D KEGG: cha:CHAB381_0226 hypothetical protein; SPTR: C2A1T8 Putative uncharacterized protein; hypothetical protein 3133970..3135643 Arcobacter nitrofigilis DSM 7299 9173299 YP_003657251.1 CDS Arnit_3097 NC_014166.1 3135697 3136812 D COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: abu:Abu_2285 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: B6BLF3 Integral membrane protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 3135697..3136812 Arcobacter nitrofigilis DSM 7299 9173300 YP_003657252.1 CDS Arnit_3098 NC_014166.1 3136983 3137369 D InterPro IPR000014:IPR013655; KEGG: abu:Abu_0847 methyl-accepting chemotaxis protein; PFAM: PAS fold-3 domain protein; SMART: PAS domain containing protein; SPTR: A8ET33 Methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; PAS sensor protein 3136983..3137369 Arcobacter nitrofigilis DSM 7299 9173301 YP_003657253.1 CDS Arnit_3099 NC_014166.1 3137380 3139611 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013587; KEGG: abu:Abu_1487 methyl-accepting chemotaxis protein; PFAM: Nitrate and nitrite sensing domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8EUW8 Methyl-accepting chemotaxis protein; PFAM: Nitrate and nitrite sensing; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 3137380..3139611 Arcobacter nitrofigilis DSM 7299 9173302 YP_003657254.1 CDS Arnit_3100 NC_014166.1 3139711 3143076 D COGs: COG4196 conserved hypothetical protein; InterPro IPR002931:IPR013589:IPR018667; KEGG: ftn:FTN_0034 hypothetical protein; PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: A7JPB3 Putative uncharacterized protein; PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily; Putative amidoligase enzyme (DUF2126); hypothetical protein 3139711..3143076 Arcobacter nitrofigilis DSM 7299 9173303 YP_003657255.1 CDS Arnit_3101 NC_014166.1 3143077 3145572 D COGs: COG2308 conserved hypothetical protein; InterPro IPR007297:IPR007302:IPR007296; KEGG: abu:Abu_2294 hypothetical protein; PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; SPTR: A8EX29 Putative uncharacterized protein; PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF404); Domain of unknown function (DUF407); hypothetical protein 3143077..3145572 Arcobacter nitrofigilis DSM 7299 9173304 YP_003657256.1 CDS Arnit_3102 NC_014166.1 3145575 3146468 D COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931:IPR013589; KEGG: abu:Abu_2295 hypothetical protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: A8EX30 Putative uncharacterized protein; PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily; transglutaminase domain-containing protein 3145575..3146468 Arcobacter nitrofigilis DSM 7299 9173305 YP_003657257.1 CDS Arnit_3103 NC_014166.1 3146481 3147146 R KEGG: abu:Abu_2306 hypothetical protein; SPTR: A8EX41 Putative uncharacterized protein; PFAM: Bacterial domain of unknown function (DUF403); hypothetical protein complement(3146481..3147146) Arcobacter nitrofigilis DSM 7299 9173306 YP_003657258.1 CDS Arnit_3104 NC_014166.1 3147148 3148512 R COGs: COG2308 conserved hypothetical protein; InterPro IPR016450:IPR007297:IPR007302; KEGG: abu:Abu_2307 hypothetical protein; PFAM: protein of unknown function DUF404; protein of unknown function DUF407; SPTR: A8EX42 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407); hypothetical protein complement(3147148..3148512) Arcobacter nitrofigilis DSM 7299 9173307 YP_003657259.1 CDS Arnit_3105 NC_014166.1 3148762 3148869 R hypothetical protein complement(3148762..3148869) Arcobacter nitrofigilis DSM 7299 9173308 YP_003657260.1 CDS Arnit_3106 NC_014166.1 3148878 3149291 R COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068:IPR008978; KEGG: abu:Abu_2289 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: A8EX24 Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; heat shock protein Hsp20 complement(3148878..3149291) Arcobacter nitrofigilis DSM 7299 9173309 YP_003657261.1 CDS Arnit_3107 NC_014166.1 3149484 3151532 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR005467:IPR003660:IPR003594:IPR 004358; KEGG: mag:amb1111 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SPTR: Q2W8B0 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase complement(3149484..3151532) Arcobacter nitrofigilis DSM 7299 9173310 YP_003657262.1 CDS Arnit_3108 NC_014166.1 3151529 3152497 R KEGG: dal:Dalk_5201 hypothetical protein; SPTR: B8FE90 Putative uncharacterized protein; PFAM: ABC transporter substrate binding protein; hypothetical protein complement(3151529..3152497) Arcobacter nitrofigilis DSM 7299 9173311 YP_003657263.1 CDS Arnit_3109 NC_014166.1 3152554 3152649 R hypothetical protein complement(3152554..3152649) Arcobacter nitrofigilis DSM 7299 9173312 YP_003657264.1 CDS Arnit_3110 NC_014166.1 3152821 3154635 R COGs: COG1217 membrane GTPase involved in stress response; InterProIPR005225:IPR006298:IPR013838:IPR000795:IPR 009022:IPR009000:IPR000640:IPR004161; KEGG: abu:Abu_2308 GTP-binding elongation factor family protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SPTR: A8EX43 GTP-binding elongation factor family protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA complement(3152821..3154635) Arcobacter nitrofigilis DSM 7299 9173313 YP_003657265.1 CDS Arnit_3112 NC_014166.1 3156117 3156356 D InterPro IPR001455; KEGG: abu:Abu_2310 hypothetical protein; PFAM: SirA family protein; SPTR: A8EX45 Putative uncharacterized protein; PFAM: SirA-like protein; SirA family protein 3156117..3156356 Arcobacter nitrofigilis DSM 7299 9173315 YP_003657266.1 CDS Arnit_3113 NC_014166.1 3156540 3157457 D COGs: COG2066 Glutaminase; InterPro IPR012338:IPR015868; KEGG: abu:Abu_2331 glutaminase A; PFAM: Glutaminase, core; PRIAM: Glutaminase; SPTR: A8EX66 Glutaminase; PFAM: Glutaminase; glutaminase 3156540..3157457 Arcobacter nitrofigilis DSM 7299 9173316 YP_003657267.1 CDS Arnit_3114 NC_014166.1 3157454 3159283 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR003594:IPR011623; KEGG: tdn:Suden_0750 histidine kinase; PFAM: ATP-binding region ATPase domain protein; Diverse 7TM receptor transmembrane region; SPTR: Q30SK2 Sensor protein; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; integral membrane sensor signal transduction histidine kinase complement(3157454..3159283) Arcobacter nitrofigilis DSM 7299 9173317 YP_003657268.1 CDS Arnit_3115 NC_014166.1 3159285 3159959 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR016032:IPR011991; KEGG: abu:Abu_1037 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ETM3 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator receiver protein complement(3159285..3159959) Arcobacter nitrofigilis DSM 7299 9173318 YP_003657269.1 CDS Arnit_3116 NC_014166.1 3160082 3162598 D InterPro IPR008638:IPR016160:IPR011050; KEGG: tdn:Suden_0748 filamentous haemagglutinin-like; PFAM: filamentous haemagglutinin domain protein; SPTR: Q30SK4 Filamentous haemagglutinin-like protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: haemagglutination activity domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; filamentous haemagglutinin family N-terminal domain; filamentous hemagglutinin family outer membrane protein 3160082..3162598 Arcobacter nitrofigilis DSM 7299 9173319 YP_003657270.1 CDS Arnit_3117 NC_014166.1 3162607 3164292 D COGs: COG2831 Hemolysin activation/secretion protein; InterPro IPR013686; KEGG: tdn:Suden_1007 hemolysin activation/secretion protein-like; PFAM: Polypeptide-transport-associated domain protein ShlB-type; SPTR: Q30RU6 Hemolysin activation/secretion protein-like protein; PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; polypeptide-transport-associated domain-containing protein 3162607..3164292 Arcobacter nitrofigilis DSM 7299 9173320 YP_003657271.1 CDS Arnit_3118 NC_014166.1 3164318 3166147 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR003594:IPR011623; KEGG: tdn:Suden_0750 histidine kinase; PFAM: ATP-binding region ATPase domain protein; Diverse 7TM receptor transmembrane region; SMART: ATP-binding region ATPase domain protein; SPTR: Q30SK2 Sensor protein; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; integral membrane sensor signal transduction histidine kinase complement(3164318..3166147) Arcobacter nitrofigilis DSM 7299 9173321 YP_003657272.1 CDS Arnit_3119 NC_014166.1 3166149 3166823 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1037 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q30SK3 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; response regulator receiver protein complement(3166149..3166823) Arcobacter nitrofigilis DSM 7299 9173322 YP_003657273.1 CDS Arnit_3120 NC_014166.1 3166963 3168279 D InterPro IPR019734:IPR013026:IPR011990:IPR013105; KEGG: abu:Abu_0929 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: A8ETB5 Putative uncharacterized protein; hypothetical protein 3166963..3168279 Arcobacter nitrofigilis DSM 7299 9173323 YP_003657274.1 CDS Arnit_3121 NC_014166.1 3168289 3169785 D KEGG: abu:Abu_0930 hypothetical protein; SPTR: A8ETB6 Putative uncharacterized protein; PFAM: FecR protein; hypothetical protein 3168289..3169785 Arcobacter nitrofigilis DSM 7299 9173324 YP_003657275.1 CDS Arnit_3123 NC_014166.1 3169992 3171074 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: abu:Abu_0441 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: A8ERZ2 ABC transporter, permease protein; PFAM: Predicted permease; hypothetical protein 3169992..3171074 Arcobacter nitrofigilis DSM 7299 9173326 YP_003657276.1 CDS Arnit_3124 NC_014166.1 3171071 3171697 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: abu:Abu_0440 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ERZ1 ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 3171071..3171697 Arcobacter nitrofigilis DSM 7299 9173327 YP_003657277.1 CDS Arnit_3125 NC_014166.1 3171690 3173252 D KEGG: abu:Abu_0439 hypothetical protein; SPTR: A8ERZ0 Putative uncharacterized protein; hypothetical protein 3171690..3173252 Arcobacter nitrofigilis DSM 7299 9173328 YP_003657278.1 CDS Arnit_3126 NC_014166.1 3173240 3174217 D KEGG: abu:Abu_0438 hypothetical protein; SPTR: A8ERY9 Putative uncharacterized protein; hypothetical protein 3173240..3174217 Arcobacter nitrofigilis DSM 7299 9173329 YP_003657279.1 CDS Arnit_3127 NC_014166.1 3174205 3174729 D InterPro IPR007372; KEGG: abu:Abu_0437 putative periplasmic protein; PFAM: YceI family protein; SPTR: A8ERY8 Hypothetical periplasmic protein; PFAM: YceI-like domain; hypothetical protein 3174205..3174729 Arcobacter nitrofigilis DSM 7299 9173330 YP_003657280.1 CDS Arnit_3128 NC_014166.1 3174730 3175182 D KEGG: abu:Abu_0436 hypothetical protein; SPTR: A8ERY7 Putative uncharacterized protein; hypothetical protein 3174730..3175182 Arcobacter nitrofigilis DSM 7299 9173331 YP_003657281.1 CDS Arnit_3129 NC_014166.1 3175179 3175910 D COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: abu:Abu_0435 Ser/Thr protein phosphatase family protein; PFAM: metallophosphoesterase; SPTR: A8ERY6 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 3175179..3175910 Arcobacter nitrofigilis DSM 7299 9173332 YP_003657282.1 CDS Arnit_3130 NC_014166.1 3175915 3176583 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR011991:IPR001867; KEGG: abu:Abu_0434 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ERY5 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 3175915..3176583 Arcobacter nitrofigilis DSM 7299 9173333 YP_003657283.1 CDS Arnit_3131 NC_014166.1 3176573 3177943 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003661:IPR003594:IPR009082:IPR 004358:IPR003660; KEGG: abu:Abu_0433 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ERY4 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 3176573..3177943 Arcobacter nitrofigilis DSM 7299 9173334 YP_003657284.1 CDS Arnit_3132 NC_014166.1 3178079 3179575 D COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR018045:IPR002645:IPR011547; KEGG: abu:Abu_1286 sulfate permease; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: A8EUB9 Sulfate permease; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; sulfate transporter 3178079..3179575 Arcobacter nitrofigilis DSM 7299 9173335 YP_003657285.1 CDS Arnit_3133 NC_014166.1 3179577 3180410 D COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR014729:IPR006015:IPR006016; KEGG: abu:Abu_1287 universal stress protein; PFAM: UspA domain protein; SPTR: A8EUC0 Universal stress protein; PFAM: Universal stress protein family; UspA domain-containing protein 3179577..3180410 Arcobacter nitrofigilis DSM 7299 9173336 YP_003657286.1 CDS Arnit_3134 NC_014166.1 3180502 3182100 D COGs: COG2194 membrane-associated metal-dependent hydrolase; InterPro IPR017850:IPR012549:IPR000917; KEGG: abu:Abu_2318 sulfatase; PFAM: sulfatase; protein of unknown function DUF1705; SPTR: A8EX53 Sulfatase; PFAM: Sulfatase; Domain of unknown function (DUF1705); sulfatase 3180502..3182100 Arcobacter nitrofigilis DSM 7299 9173337 YP_003657287.1 CDS Arnit_3135 NC_014166.1 3182087 3182782 D COGs: COG3907 PAP2 (acid phosphatase) superfamily protein; InterPro IPR000326; KEGG: abu:Abu_2319 PAP2 superfamily protein; PFAM: phosphoesterase PA-phosphatase related; SPTR: A8EX54 PAP2 superfamily protein; PFAM: PAP2 superfamily; phosphoesterase PA-phosphatase-like protein 3182087..3182782 Arcobacter nitrofigilis DSM 7299 9173338 YP_003657288.1 CDS Arnit_3136 NC_014166.1 3182760 3183119 D COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: tdn:Suden_0318 diacylglycerol kinase; PFAM: diacylglycerol kinase; SPTR: Q30TT2 Diacylglycerol kinase; PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase 3182760..3183119 Arcobacter nitrofigilis DSM 7299 9173339 YP_003657289.1 CDS Arnit_3137 NC_014166.1 3183199 3183606 D InterPro IPR009056:IPR015170; KEGG: abu:Abu_2320 cytochrome c-type protein, putative; PFAM: Domain of unknown function DUF1924; SPTR: A8EX55 Cytochrome c-type protein, putative; PFAM: Domain of unknown function (DUF1924); hypothetical protein 3183199..3183606 Arcobacter nitrofigilis DSM 7299 9173340 YP_003657290.1 CDS Arnit_3138 NC_014166.1 3183606 3184121 D InterPro IPR018588; KEGG: abu:Abu_2321 diheme cytochrome c precursor, putative; PFAM: Dihaem cytochrome c; SPTR: A8EX56 Diheme cytochrome c, putative; PFAM: Dihaem cytochrome c; diheme cytochrome c 3183606..3184121 Arcobacter nitrofigilis DSM 7299 9173341 YP_003657291.1 CDS Arnit_3139 NC_014166.1 3184130 3184906 D COGs: COG3658 Cytochrome b; InterPro IPR016174:IPR011577; KEGG: abu:Abu_2322 cytochrome b, putative; PFAM: cytochrome B561; SPTR: A8EX57 Cytochrome b, putative; PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 3184130..3184906 Arcobacter nitrofigilis DSM 7299 9173342 YP_003657292.1 CDS Arnit_3140 NC_014166.1 3184863 3185249 D InterPro IPR018588; KEGG: abu:Abu_2323 hypothetical protein; PFAM: Dihaem cytochrome c; SPTR: A8EX58 Putative uncharacterized protein; PFAM: Dihaem cytochrome c; diheme cytochrome c 3184863..3185249 Arcobacter nitrofigilis DSM 7299 9173343 YP_003657293.1 CDS Arnit_3141 NC_014166.1 3185215 3185628 D KEGG: abu:Abu_2324 hypothetical protein; SPTR: A8EX59 Putative uncharacterized protein; hypothetical protein 3185215..3185628 Arcobacter nitrofigilis DSM 7299 9173344 YP_003657294.1 CDS Arnit_3142 NC_014166.1 3185621 3186286 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_2325 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EX60 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 3185621..3186286 Arcobacter nitrofigilis DSM 7299 9173345 YP_003657295.1 CDS Arnit_3143 NC_014166.1 3186288 3187481 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR003660:IPR003594:IPR009082; KEGG: abu:Abu_2326 two-component sensor histidine kinase; PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; SPTR: A8EX61 Two-component sensor histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 3186288..3187481 Arcobacter nitrofigilis DSM 7299 9173346 YP_003657296.1 CDS Arnit_3144 NC_014166.1 3187530 3188135 D COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: abu:Abu_2332 hypothetical protein; PFAM: protein of unknown function UPF0126; SPTR: A8EX67 Conserved hypothetical membrane protein; PFAM: UPF0126 domain; hypothetical protein 3187530..3188135 Arcobacter nitrofigilis DSM 7299 9173347 YP_003657297.1 CDS Arnit_3145 NC_014166.1 3188130 3189056 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dps:DP1552 hypothetical protein; PFAM: GGDEF domain containing protein; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; SPTR: Q6AMZ3 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(3188130..3189056) Arcobacter nitrofigilis DSM 7299 9173348 YP_003657298.1 CDS Arnit_3146 NC_014166.1 3189057 3189674 R COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: abu:Abu_1359 inhibitor of MCP methylation, CheC; PFAM: CheC domain protein; SPTR: A8EUJ1 Inhibitor of MCP methylation, CheC; PFAM: CheC-like family; inhibitor of MCP methylation CheC complement(3189057..3189674) Arcobacter nitrofigilis DSM 7299 9173349 YP_003657299.1 CDS Arnit_3147 NC_014166.1 3189674 3190039 R COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1358 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EUJ0 Response regulator receiver domain protein, CheY-like; PFAM: Response regulator receiver domain; response regulator receiver protein complement(3189674..3190039) Arcobacter nitrofigilis DSM 7299 9173350 YP_003657300.1 CDS Arnit_3148 NC_014166.1 3190095 3190670 R COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR001555:IPR002376; KEGG: abu:Abu_2334 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: A8EX69 Phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; formyl transferase domain-containing protein complement(3190095..3190670) Arcobacter nitrofigilis DSM 7299 9173351 YP_003657301.1 CDS Arnit_3149 NC_014166.1 3190730 3191611 R InterPro IPR000620; KEGG: bch:Bcen2424_3207 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A3YF08 Putative integral membrane protein; PFAM: EamA-like transporter family; hypothetical protein complement(3190730..3191611) Arcobacter nitrofigilis DSM 7299 9173352 YP_003657302.1 CDS Arnit_3150 NC_014166.1 3191632 3192105 R COGs: COG0817 Holliday junction resolvasome endonuclease subunit; InterPro IPR002176:IPR020563:IPR012337; KEGG: abu:Abu_2335 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: A8EX70 Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC complement(3191632..3192105) Arcobacter nitrofigilis DSM 7299 9173353 Arnit_R0002 tRNA Arnit_R0002 NC_014166.1 168501 168577 D tRNA-Arg 168501..168577 Arcobacter nitrofigilis DSM 7299 9170309 Arnit_R0004 tRNA Arnit_R0004 NC_014166.1 239556 239632 D tRNA-Ile 239556..239632 Arcobacter nitrofigilis DSM 7299 9170388 Arnit_R0005 tRNA Arnit_R0005 NC_014166.1 239652 239727 D tRNA-Ala 239652..239727 Arcobacter nitrofigilis DSM 7299 9170389 Arnit_R0008 tRNA Arnit_R0008 NC_014166.1 303316 303393 D tRNA-Pro 303316..303393 Arcobacter nitrofigilis DSM 7299 9170461 Arnit_R0009 tRNA Arnit_R0009 NC_014166.1 303404 303480 D tRNA-His 303404..303480 Arcobacter nitrofigilis DSM 7299 9170462 Arnit_R0010 tRNA Arnit_R0010 NC_014166.1 303497 303573 D tRNA-Arg 303497..303573 Arcobacter nitrofigilis DSM 7299 9170463 Arnit_R0011 tRNA Arnit_R0011 NC_014166.1 303635 303719 D tRNA-Leu 303635..303719 Arcobacter nitrofigilis DSM 7299 9170464 Arnit_R0012 tRNA Arnit_R0012 NC_014166.1 303816 303892 D tRNA-Met 303816..303892 Arcobacter nitrofigilis DSM 7299 9170465 Arnit_R0013 tRNA Arnit_R0013 NC_014166.1 317454 317530 D tRNA-Met 317454..317530 Arcobacter nitrofigilis DSM 7299 9170481 Arnit_R0014 tRNA Arnit_R0014 NC_014166.1 375862 375937 R tRNA-Phe complement(375862..375937) Arcobacter nitrofigilis DSM 7299 9170537 Arnit_R0015 tRNA Arnit_R0015 NC_014166.1 375943 376027 R tRNA-Tyr complement(375943..376027) Arcobacter nitrofigilis DSM 7299 9170538 Arnit_R0016 tRNA Arnit_R0016 NC_014166.1 598534 598618 D tRNA-Leu 598534..598618 Arcobacter nitrofigilis DSM 7299 9170759 Arnit_R0017 tRNA Arnit_R0017 NC_014166.1 753064 753140 R tRNA-Asp complement(753064..753140) Arcobacter nitrofigilis DSM 7299 9170913 Arnit_R0018 tRNA Arnit_R0018 NC_014166.1 753157 753232 R tRNA-Val complement(753157..753232) Arcobacter nitrofigilis DSM 7299 9170914 Arnit_R0019 tRNA Arnit_R0019 NC_014166.1 753236 753310 R tRNA-Glu complement(753236..753310) Arcobacter nitrofigilis DSM 7299 9170915 Arnit_R0020 tRNA Arnit_R0020 NC_014166.1 753342 753417 R tRNA-Lys complement(753342..753417) Arcobacter nitrofigilis DSM 7299 9170916 Arnit_R0021 tRNA Arnit_R0021 NC_014166.1 753426 753502 R tRNA-Asp complement(753426..753502) Arcobacter nitrofigilis DSM 7299 9170917 Arnit_R0022 tRNA Arnit_R0022 NC_014166.1 753525 753600 R tRNA-Val complement(753525..753600) Arcobacter nitrofigilis DSM 7299 9170918 Arnit_R0023 tRNA Arnit_R0023 NC_014166.1 753604 753678 R tRNA-Glu complement(753604..753678) Arcobacter nitrofigilis DSM 7299 9170919 Arnit_R0024 tRNA Arnit_R0024 NC_014166.1 753721 753796 R tRNA-Lys complement(753721..753796) Arcobacter nitrofigilis DSM 7299 9170920 Arnit_R0025 tRNA Arnit_R0025 NC_014166.1 834121 834204 R tRNA-Leu complement(834121..834204) Arcobacter nitrofigilis DSM 7299 9170996 Arnit_R0026 tRNA Arnit_R0026 NC_014166.1 977631 977730 R tRNA-Sec complement(977631..977730) Arcobacter nitrofigilis DSM 7299 9171144 Arnit_R0027 tRNA Arnit_R0027 NC_014166.1 1449916 1449991 D tRNA-Glu 1449916..1449991 Arcobacter nitrofigilis DSM 7299 9171645 Arnit_R0028 tRNA Arnit_R0028 NC_014166.1 1615572 1615647 D tRNA-Val 1615572..1615647 Arcobacter nitrofigilis DSM 7299 9171766 Arnit_R0029 tRNA Arnit_R0029 NC_014166.1 1703837 1703913 R tRNA-Met complement(1703837..1703913) Arcobacter nitrofigilis DSM 7299 9171869 Arnit_R0030 tRNA Arnit_R0030 NC_014166.1 1703926 1704000 R tRNA-Gln complement(1703926..1704000) Arcobacter nitrofigilis DSM 7299 9171870 Arnit_R0032 tRNA Arnit_R0032 NC_014166.1 2222768 2222842 R tRNA-Asn complement(2222768..2222842) Arcobacter nitrofigilis DSM 7299 9172392 Arnit_R0033 tRNA Arnit_R0033 NC_014166.1 2222876 2222950 R tRNA-Asn complement(2222876..2222950) Arcobacter nitrofigilis DSM 7299 9172393 Arnit_R0034 tRNA Arnit_R0034 NC_014166.1 2283792 2283880 R tRNA-Ser complement(2283792..2283880) Arcobacter nitrofigilis DSM 7299 9172451 Arnit_R0035 tRNA Arnit_R0035 NC_014166.1 2283962 2284038 R tRNA-Gly complement(2283962..2284038) Arcobacter nitrofigilis DSM 7299 9172452 Arnit_R0036 tRNA Arnit_R0036 NC_014166.1 2284078 2284154 R tRNA-Met complement(2284078..2284154) Arcobacter nitrofigilis DSM 7299 9172453 Arnit_R0037 tRNA Arnit_R0037 NC_014166.1 2284170 2284259 R tRNA-Ser complement(2284170..2284259) Arcobacter nitrofigilis DSM 7299 9172454 Arnit_R0038 tRNA Arnit_R0038 NC_014166.1 2324879 2324954 R tRNA-Thr complement(2324879..2324954) Arcobacter nitrofigilis DSM 7299 9172501 Arnit_R0041 tRNA Arnit_R0041 NC_014166.1 2328657 2328732 R tRNA-Ala complement(2328657..2328732) Arcobacter nitrofigilis DSM 7299 9172504 Arnit_R0042 tRNA Arnit_R0042 NC_014166.1 2328752 2328828 R tRNA-Ile complement(2328752..2328828) Arcobacter nitrofigilis DSM 7299 9172505 Arnit_R0045 tRNA Arnit_R0045 NC_014166.1 2583033 2583108 R tRNA-Cys complement(2583033..2583108) Arcobacter nitrofigilis DSM 7299 9172752 Arnit_R0046 tRNA Arnit_R0046 NC_014166.1 2583154 2583242 R tRNA-Ser complement(2583154..2583242) Arcobacter nitrofigilis DSM 7299 9172753 Arnit_R0047 tRNA Arnit_R0047 NC_014166.1 2583259 2583345 R tRNA-Leu complement(2583259..2583345) Arcobacter nitrofigilis DSM 7299 9172754 Arnit_R0048 tRNA Arnit_R0048 NC_014166.1 2637541 2637616 R tRNA-Trp complement(2637541..2637616) Arcobacter nitrofigilis DSM 7299 9172802 Arnit_R0049 tRNA Arnit_R0049 NC_014166.1 2639273 2639349 R tRNA-Gly complement(2639273..2639349) Arcobacter nitrofigilis DSM 7299 9172805 Arnit_R0050 tRNA Arnit_R0050 NC_014166.1 2639358 2639442 R tRNA-Tyr complement(2639358..2639442) Arcobacter nitrofigilis DSM 7299 9172806 Arnit_R0051 tRNA Arnit_R0051 NC_014166.1 2639512 2639588 R tRNA-Thr complement(2639512..2639588) Arcobacter nitrofigilis DSM 7299 9172807 Arnit_R0052 tRNA Arnit_R0052 NC_014166.1 2639610 2639685 R tRNA-Phe complement(2639610..2639685) Arcobacter nitrofigilis DSM 7299 9172808 Arnit_R0055 tRNA Arnit_R0055 NC_014166.1 2660052 2660127 R tRNA-Ala complement(2660052..2660127) Arcobacter nitrofigilis DSM 7299 9172828 Arnit_R0056 tRNA Arnit_R0056 NC_014166.1 2660147 2660223 R tRNA-Ile complement(2660147..2660223) Arcobacter nitrofigilis DSM 7299 9172829 Arnit_R0058 tRNA Arnit_R0058 NC_014166.1 2695547 2695621 D tRNA-Gln 2695547..2695621 Arcobacter nitrofigilis DSM 7299 9172859 Arnit_R0059 tRNA Arnit_R0059 NC_014166.1 2695638 2695724 D tRNA-Leu 2695638..2695724 Arcobacter nitrofigilis DSM 7299 9172860 Arnit_R0060 tRNA Arnit_R0060 NC_014166.1 2695732 2695808 D tRNA-Gly 2695732..2695808 Arcobacter nitrofigilis DSM 7299 9172861 Arnit_R0061 tRNA Arnit_R0061 NC_014166.1 2695823 2695898 D tRNA-Lys 2695823..2695898 Arcobacter nitrofigilis DSM 7299 9172862 Arnit_R0062 tRNA Arnit_R0062 NC_014166.1 2695915 2695991 D tRNA-Met 2695915..2695991 Arcobacter nitrofigilis DSM 7299 9172863 Arnit_R0063 tRNA Arnit_R0063 NC_014166.1 2696006 2696082 D tRNA-Met 2696006..2696082 Arcobacter nitrofigilis DSM 7299 9172864 Arnit_R0064 tRNA Arnit_R0064 NC_014166.1 2696095 2696171 D tRNA-Thr 2696095..2696171 Arcobacter nitrofigilis DSM 7299 9172865 Arnit_R0065 tRNA Arnit_R0065 NC_014166.1 2696202 2696290 D tRNA-Ser 2696202..2696290 Arcobacter nitrofigilis DSM 7299 9172866 Arnit_R0066 tRNA Arnit_R0066 NC_014166.1 3083318 3083393 R tRNA-Thr complement(3083318..3083393) Arcobacter nitrofigilis DSM 7299 9173245 Arnit_R0069 tRNA Arnit_R0069 NC_014166.1 3087075 3087150 R tRNA-Ala complement(3087075..3087150) Arcobacter nitrofigilis DSM 7299 9173249 Arnit_R0070 tRNA Arnit_R0070 NC_014166.1 3087170 3087246 R tRNA-Ile complement(3087170..3087246) Arcobacter nitrofigilis DSM 7299 9173250 Arnit_R0003 rRNA Arnit_R0003 NC_014166.1 237935 239439 D 16S ribosomal RNA 237935..239439 Arcobacter nitrofigilis DSM 7299 9170387 Arnit_R0006 rRNA Arnit_R0006 NC_014166.1 240031 242945 D 23S ribosomal RNA 240031..242945 Arcobacter nitrofigilis DSM 7299 9170390 Arnit_R0007 rRNA Arnit_R0007 NC_014166.1 243150 243264 D 5S ribosomal RNA 243150..243264 Arcobacter nitrofigilis DSM 7299 9170391 Arnit_R0039 rRNA Arnit_R0039 NC_014166.1 2325121 2325235 R 5S ribosomal RNA complement(2325121..2325235) Arcobacter nitrofigilis DSM 7299 9172502 Arnit_R0040 rRNA Arnit_R0040 NC_014166.1 2325440 2328354 R 23S ribosomal RNA complement(2325440..2328354) Arcobacter nitrofigilis DSM 7299 9172503 Arnit_R0043 rRNA Arnit_R0043 NC_014166.1 2328945 2330449 R 16S ribosomal RNA complement(2328945..2330449) Arcobacter nitrofigilis DSM 7299 9172506 Arnit_R0053 rRNA Arnit_R0053 NC_014166.1 2656494 2656608 R 5S ribosomal RNA complement(2656494..2656608) Arcobacter nitrofigilis DSM 7299 9172826 Arnit_R0054 rRNA Arnit_R0054 NC_014166.1 2656834 2659748 R 23S ribosomal RNA complement(2656834..2659748) Arcobacter nitrofigilis DSM 7299 9172827 Arnit_R0057 rRNA Arnit_R0057 NC_014166.1 2660340 2661844 R 16S ribosomal RNA complement(2660340..2661844) Arcobacter nitrofigilis DSM 7299 9172830 Arnit_R0067 rRNA Arnit_R0067 NC_014166.1 3083566 3083680 R 5S ribosomal RNA complement(3083566..3083680) Arcobacter nitrofigilis DSM 7299 9173246 Arnit_R0068 rRNA Arnit_R0068 NC_014166.1 3083885 3086799 R 23S ribosomal RNA complement(3083885..3086799) Arcobacter nitrofigilis DSM 7299 9173247 Arnit_R0071 rRNA Arnit_R0071 NC_014166.1 3087363 3088867 R 16S ribosomal RNA complement(3087363..3088867) Arcobacter nitrofigilis DSM 7299 9173251