-- dump date   	20140618_205019
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_003654177.1	COGs: COG0593 ATPase involved in DNA replication initiation; InterProIPR020591:IPR010921:IPR003593:IPR013159:IPR 013317:IPR001957; KEGG: abu:Abu_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: A8EQT0 Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_003654178.1	COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: abu:Abu_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: A8EQT1 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_003654179.1	COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR001241:IPR000565:IPR013760:IPR003594:IPR 020568:IPR018522:IPR013759:IPR013506:IPR006171:IPR002288:I PR011557; KEGG: abu:Abu_0003 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: A8EQT2 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_003654180.1	COGs: COG4679 Phage-related protein; InterPro IPR009241; KEGG: amr:AM1_6214 putative phage protein GP49; PFAM: protein of unknown function DUF891; SPTR: B0C629 Phage derived protein Gp49-like protein (DUF891); PFAM: Phage derived protein Gp49-like (DUF891)
YP_003654181.1	InterPro IPR010982:IPR001387; KEGG: amr:AM1_6215 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B0C630 Helix-turn-helix domain protein; PFAM: Helix-turn-helix
YP_003654182.1	COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: abu:Abu_0267 metal-dependent hydrolase; PFAM: protein of unknown function DUF45; SPTR: A8ERG8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF45
YP_003654183.1	KEGG: pfo:Pfl01_5227 hypothetical protein; SPTR: Q3K5J0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3010)
YP_003654184.1	COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: vsp:VS_II0405 TRAP dicarboxylate family transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: C9NTT3 Predicted gluconate TRAP family transporter DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7
YP_003654185.1	InterPro IPR007387; KEGG: pin:Ping_2934 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: C9PCZ1 Predicted gluconate TRAP family transporter DctQ subunit; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_003654186.1	COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: rsk:RSKD131_4254 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q0G5L5 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_003654187.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR016160:IPR016162:IPR015590; KEGG: cff:CFF8240_0070 aldehyde dehydrogenase A; PFAM: Aldehyde Dehydrogenase; PRIAM: Glycolaldehyde dehydrogenase; SPTR: A0RM47 Aldehyde dehydrogenase A; PFAM: Aldehyde dehydrogenase family
YP_003654188.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: bcm:Bcenmc03_6234 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: A5ZUR5 Putative uncharacterized protein; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_003654189.1	COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR020625:IPR013785; KEGG: gka:GK1961 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: A5ZUR8 Putative uncharacterized protein; PFAM: Dihydrodipicolinate synthetase family
YP_003654190.1	COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: amt:Amet_0500 transcriptional regulator IclR-like protein; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SPTR: A6TKK9 Transcriptional regulator IclR-like protein; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003654191.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: spl:Spea_0493 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: C6MPJ6 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator
YP_003654192.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR009057:IPR003313:IPR018062:IPR012287:IPR 018060:IPR000005; KEGG: vsa:VSAL_I1212 transcriptional regulator, AraC-family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; SPTR: A6DBM1 Transcriptional regulator, AraC family protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_003654193.1	COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: wsu:WS0748 immunogenic protein; SPTR: C1ZY21 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_003654194.1	InterPro IPR000620; KEGG: abu:Abu_0604 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8ESE5 Membrane protein, putative (DUF6 domain protein); PFAM: EamA-like transporter family
YP_003654195.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR000103:IPR001327; KEGG: nis:NIS_1734 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A6Q5T1 Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003654196.1	COGs: COG0780 Enzyme related to GTP cyclohydrolase I; InterPro IPR016856:IPR020602; KEGG: abu:Abu_0005 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: PreQ(1) synthase; SPTR: A8EQT4 7-cyano-7-deazaguanine reductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase
YP_003654197.1	KEGG: abu:Abu_0006 hypothetical protein; SPTR: A8EQT5 Putative uncharacterized protein
YP_003654198.1	COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR002114:IPR000620; KEGG: dvl:Dvul_0297 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C2A221 Predicted permease, DMT superfamily; PFAM: EamA-like transporter family
YP_003654199.1	COGs: COG1238 membrane protein; InterPro IPR020143:IPR015414; KEGG: abu:Abu_0007 putative integral membrane protein; PFAM: SNARE associated Golgi protein; SPTR: A8EQT6 Putative uncharacterized protein; PFAM: SNARE associated Golgi protein
YP_003654200.1	COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterProIPR008995:IPR011991:IPR016462:IPR000847:IPR 005116; KEGG: hya:HY04AAS1_0940 transcriptional regulator, ModE family; PFAM: TOBE domain protein; regulatory protein LysR; SPTR: B6BI33 Molybdenum-pterin-binding protein; PFAM: TOBE domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdenum-pterin binding domain
YP_003654201.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR009082:IPR001638:IPR 000014:IPR005467:IPR013767; KEGG: pin:Ping_0979 sensor histidine kinase; PFAM: extracellular solute-binding protein family 3; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAS domain containing protein; SPTR: A1STK4 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: PAS domain S-box
YP_003654202.1	InterPro IPR017900:IPR017896:IPR001450; KEGG: wsu:WS0032 hypothetical protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q7MSX0 Putative uncharacterized protein FDXA
YP_003654203.1	InterPro IPR016181:IPR000182; KEGG: tgr:Tgr7_1703 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B8GS82 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_003654204.1	COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR003593:IPR010603:IPR013093:IPR019489:IPR 004487; KEGG: wsu:WS1403 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: Q7M8U5 ATP-dependent Clp protease ATP-binding subunit clpX 2; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_003654205.1	KEGG: ttu:TERTU_1536 hypothetical protein; SPTR: C5BTA9 Putative uncharacterized protein
YP_003654206.1	InterPro IPR012335; KEGG: cha:CHAB381_1783 thiol peroxidase (scavengase P20); SPTR: B0NMN1 Putative uncharacterized protein
YP_003654207.1	COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterProIPR020441:IPR009057:IPR002078:IPR003018:IPR 003593:IPR002197; KEGG: wsu:WS1404 NifA family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase; SPTR: Q7M8U4 TRANSCRIPTIONAL REGULATOR (NIFA FAMILY); PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein
YP_003654208.1	InterPro IPR009727; KEGG: wsu:WS1400 hypothetical protein; PFAM: NifT/FixU family protein; SPTR: Q7MRF3 Putative uncharacterized protein; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT
YP_003654209.1	COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR015939:IPR003953:IPR004112; KEGG: wsu:WS1399 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: L-aspartate oxidase; SPTR: Q7M8U6 FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT; PFAM: domain; FAD binding domain
YP_003654210.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: wsu:WS1398 hypothetical protein; PFAM: aldo/keto reductase; SPTR: Q7MRF4 Putative uncharacterized protein; PFAM: Aldo/keto reductase family
YP_003654211.1	COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR013027:IPR007419:IPR006137; KEGG: sun:SUN_1652 Ni-Fe hydrogenase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: B6BMJ6 Quinone-reactive Ni/Fe-hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, 20 Kd subunit; BFD-like [2Fe-2S] binding domain; TIGRFAM: hydrogenase (NiFe) small subunit (hydA)
YP_003654212.1	COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: sun:SUN_1653 Ni-Fe hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: B6BMJ3 Quinone-reactive Ni/Fe-hydrogenase large chain; PFAM: Nickel-dependent hydrogenase
YP_003654213.1	COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638:IPR013785; KEGG: abu:Abu_0906 molybdenum transport system protein ModD, putative; PFAM: Quinolinate phosphoribosyl transferase; SPTR: A8ET92 Molybdenum transport system protein ModD, putative; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain
YP_003654214.1	InterPro IPR008995:IPR005116:IPR004606; KEGG: tdn:Suden_1548 molybdenum-pterin binding protein; PFAM: TOBE domain protein; SPTR: Q30QA6 Molybdenum-pterin binding protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain
YP_003654215.1	COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515:IPR011867; KEGG: cts:Ctha_1428 molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C6RH80 Molybdate ABC transporter, permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein
YP_003654216.1	COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950; KEGG: tau:Tola_1211 molybdenum ABC transporter, periplasmic molybdate-binding protein; SPTR: C4LE08 Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_003654217.1	COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: abu:Abu_0009 molybdenum ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B6BI30 Molybdenum transport ATP-binding protein; PFAM: ABC transporter
YP_003654218.1	COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515:IPR011867; KEGG: sun:SUN_2103 molybdenum ABC transporter, permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6QC35 Molybdenum ABC transporter, permease; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein
YP_003654219.1	InterPro IPR008995:IPR005116; KEGG: abu:Abu_0011 hypothetical protein; PFAM: TOBE domain protein; SPTR: A8EQU0 Putative uncharacterized protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain
YP_003654220.1	COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR006059:IPR005950; KEGG: abu:Abu_0012 molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: A8EQU1 Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_003654221.1	InterPro IPR008995:IPR005116:IPR004606; KEGG: abu:Abu_0013 molybdenum-binding protein; PFAM: TOBE domain protein; SPTR: A8EQU2 Molybdenum-binding protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain
YP_003654222.1	COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000318:IPR000510:IPR005976; KEGG: wsu:WS1391 nitrogenase beta subunit; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Q7M8U9 NITROGENASE BETA SUBUNIT; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: Domain of unknown function (DUF3364); Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain
YP_003654223.1	COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000318:IPR000510:IPR005972:IPR010143; KEGG: wsu:WS1392 hypothetical protein; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Q7MRF8 Nitrogenase protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain
YP_003654224.1	KEGG: wsu:WS1393 hypothetical protein; SPTR: Q7MRF7 Putative uncharacterized protein
YP_003654225.1	COGs: COG1348 Nitrogenase subunit NifH (ATPase); InterPro IPR000392:IPR005977; KEGG: wsu:WS1394 dinitrogenase reductase subunit; PFAM: NifH/frxC-family protein; PRIAM: Nitrogenase; SPTR: Q7M8U8 Nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein
YP_003654226.1	COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037; KEGG: abu:Abu_1288 trk system potassium uptake protein TrkA, putative; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: A8EUC1 TRK system potassium uptake protein TrkA, putative; PFAM: TrkA-N domain; TrkA-C domain
YP_003654227.1	COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445:IPR004772; KEGG: abu:Abu_1289 trk system potassium uptake protein TrkB, putative; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: A8EUC2 TRK system potassium uptake protein TrkB, putative; TIGRFAM: potassium uptake protein, TrkH family; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family
YP_003654228.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR016032:IPR001789:IPR001867; KEGG: abu:Abu_1290 two component system transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EUC3 Two component system transcriptional regulatory protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654229.1	COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR004358:IPR003594:IPR009082:IPR003661:IPR 005467; KEGG: abu:Abu_1291 two-component regulatory protein sensor kinase KdpD; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EUC4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003654230.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterProIPR004090:IPR001610:IPR004089:IPR000014:IPR 000700:IPR013655; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003654231.1	COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: wsu:WS2100 RNA polymerase factor sigma-54; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor; sigma-54 factor core-binding region; SPTR: Q7M7T2 RNA POLYMERASE SIGMA-54 FACTOR; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor
YP_003654232.1	InterPro IPR001041:IPR006058:IPR012675; KEGG: wsu:WS1382 hypothetical protein; PFAM: ferredoxin; SPTR: Q7MRG5 Putative uncharacterized protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_003654233.1	KEGG: rpt:Rpal_2139 ferredoxin; SPTR: C5ESK5 D-serine ammonia-lyase
YP_003654234.1	InterPro IPR007415; KEGG: wsu:WS1383 putative nitrogen fixation protein; PFAM: NifZ family protein; SPTR: Q7M8V0 PUTATIVE NITROGEN FIXATION PROTEIN; PFAM: NifZ domain
YP_003654235.1	InterPro IPR004893; KEGG: wsu:WS1384 hypothetical protein; PFAM: nitrogen fixation protein NifW; SPTR: Q7MRG4 Putative uncharacterized protein hydA; PFAM: Nitrogen fixation protein NifW
YP_003654236.1	COGs: COG0716 Flavodoxins; InterPro IPR008254; KEGG: avn:Avin_45950 flavodoxin I; PFAM: flavodoxin/nitric oxide synthase; SPTR: B4WRT9 Flavodoxin; PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain
YP_003654237.1	InterPro IPR004952; KEGG: msl:Msil_3626 nitrogen fixation protein; PFAM: protein of unknown function DUF269; SPTR: B8EJ19 Nitrogen fixation protein; TIGRFAM: nitrogen fixation protein; PFAM: Protein of unknown function, DUF269; TIGRFAM: probable nitrogen fixation protein
YP_003654238.1	InterPro IPR003731; KEGG: wsu:WS1387 hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Q7MRG1 NIFX; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX
YP_003654239.1	KEGG: xau:Xaut_2910 hypothetical protein; SPTR: A7IJF4 Putative uncharacterized protein
YP_003654240.1	InterPro IPR000415; KEGG: cyc:PCC7424_2100 hypothetical protein; SPTR: B7KG56 Putative uncharacterized protein; PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain
YP_003654241.1	InterPro IPR020683:IPR002110; KEGG: ava:Ava_3944 ankyrin; PFAM: Ankyrin; SMART: Ankyrin; SPTR: A0YVD4 Putative uncharacterized protein; PFAM: Ankyrin repeat
YP_003654242.1	InterPro IPR012336:IPR012335; KEGG: hya:HY04AAS1_0035 redoxin domain protein; SPTR: B4U657 Redoxin domain protein; PFAM: AhpC/TSA family
YP_003654243.1	KEGG: bhy:BHWA1_00717 hypothetical protein; SPTR: C1QB54 Putative uncharacterized protein
YP_003654244.1	COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000318:IPR000510:IPR005975; KEGG: pca:Pcar_0314 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Q3A7S0 Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN
YP_003654245.1	KEGG: abu:Abu_1394 hypothetical protein; SPTR: A8EUM5 Putative uncharacterized protein
YP_003654246.1	KEGG: mpe:MYPE7800 hypothetical protein; SPTR: Q8EUY8 Putative uncharacterized protein MYPE7800
YP_003654247.1	COGs: COG0628 permease; InterPro IPR002549; KEGG: abu:Abu_1751 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: A8EVM4 Conserved hypothetical transmembrane protein; PFAM: Domain of unknown function DUF20
YP_003654248.1	KEGG: conserved hypothetical protein; SPTR: Q8IEN8 Putative uncharacterized protein
YP_003654249.1	COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR020558:IPR000510; KEGG: pca:Pcar_0313 nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; SPTR: Q3A7S1 Nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE
YP_003654250.1	InterPro IPR003731; KEGG: sul:SYO3AOP1_1078 dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: C2A0P3 Uncharacterized conserved protein; PFAM: Dinitrogenase iron-molybdenum cofactor
YP_003654251.1	COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR011990:IPR006597:IPR001075; KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; nitrogen-fixing NifU domain protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: B3ESM2 Putative uncharacterized protein; PFAM: Sel1 repeat; NifU-like domain
YP_003654252.1	InterPro IPR003731; KEGG: cyc:PCC7424_2114 nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: B7KG70 Nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX
YP_003654253.1	COGs: COG0426 flavoprotein; InterPro IPR016440:IPR008254; KEGG: dar:Daro_1451 beta-lactamase-like:flavodoxin/nitric oxide synthase; PFAM: flavodoxin/nitric oxide synthase; SPTR: Q47G31 Beta-lactamase-like:Flavodoxin/nitric oxide synthase; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin
YP_003654254.1	KEGG: hwa:HQ2074A hypothetical protein; SPTR: Q18IH1 Putative uncharacterized protein
YP_003654255.1	InterPro IPR012336:IPR012335:IPR006660; KEGG: cyh:Cyan8802_1800 nitrogenase-associated protein; PFAM: arsenate reductase and related; SPTR: B7JWW9 Nitrogenase-associated protein; PFAM: ArsC family; TIGRFAM: nitrogenase-associated protein
YP_003654256.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR003731:IPR000385:IPR007197:IPR005980; KEGG: lch:Lcho_1404 nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM domain protein; Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: B1Y745 Nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB
YP_003654257.1	KEGG: hypothetical protein; SPTR: Q4YCC1 Putative uncharacterized protein (Fragment)
YP_003654258.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034:IPR013785:IPR000891:IPR013477; KEGG: wsu:WS1396 homocitrate sythase 1; PFAM: pyruvate carboxyltransferase; SPTR: Q7M8U7 HOMOCITRATE SYTHASE 1; TIGRFAM: homocitrate synthase; PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV
YP_003654259.1	KEGG: ech:ECH_0024 glycyl-tRNA synthetase, beta subunit; SPTR: Q2GI76 Glycyl-tRNA synthetase, beta subunit
YP_003654260.1	KEGG: cpc:Cpar_1595 hypothetical protein; SPTR: B3QPZ0 Putative uncharacterized protein
YP_003654261.1	KEGG: wsu:WS1395 hypothetical protein; SPTR: Q7MRF6 Putative uncharacterized protein
YP_003654262.1	COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR003591:IPR001611; KEGG: ter:Tery_3798 small GTP-binding protein; PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; SPTR: Q10Y31 Small GTP-binding protein; PFAM: Leucine Rich Repeat
YP_003654263.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR020103:IPR006224:IPR006145; KEGG: abu:Abu_0018 ribosomal large subunit pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: A8EQU7 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_003654264.1	COGs: COG0015 Adenylosuccinate lyase; InterProIPR000362:IPR003031:IPR008948:IPR020557:IPR 019468:IPR004769; KEGG: abu:Abu_0019 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: A8EQU8 Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase
YP_003654265.1	InterProIPR000788:IPR008926:IPR005144:IPR013509:IPR 013346; KEGG: abu:Abu_0020 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: A8EQU9 Ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit
YP_003654266.1	COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR009078:IPR012348:IPR000358; KEGG: abu:Abu_0021 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: A8EQR9 Ribonucleoside-diphosphate reductase, beta chain; PFAM: Ribonucleotide reductase, small chain
YP_003654267.1	KEGG: rce:RC1_2412 hypothetical protein; SPTR: A8T108 Putative uncharacterized protein
YP_003654268.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR011623; KEGG: tdn:Suden_1328 diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; SPTR: B6BNQ1 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: 7TM diverse intracellular signalling; GGDEF domain; 7TMR-DISM extracellular 2; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003654269.1	COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: abu:Abu_0023 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: A8EQS1 Putative uncharacterized protein; PFAM: Thioesterase superfamily
YP_003654270.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: son:SO_1716 amino acid transporter LysE; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q8EG90 Transporter, LysE family; PFAM: LysE type translocator
YP_003654271.1	InterPro IPR000620; KEGG: yen:YE3697 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: B9C9T6 Probable amino-acid metabolite efflux pump; PFAM: EamA-like transporter family
YP_003654272.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR020449:IPR011256:IPR009057:IPR012287:IPR 018060:IPR000005:IPR010499; KEGG: abu:Abu_0178 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8ER81 Transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003654273.1	InterPro IPR004360; KEGG: abu:Abu_2072 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: A8EWG6 Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003654274.1	InterPro IPR009056; KEGG: sun:SUN_0504 hypothetical protein; SPTR: A6Q7K5 Putative uncharacterized protein
YP_003654275.1	COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: abu:Abu_0025 hypothetical protein; PFAM: OmpA/MotB domain protein; SPTR: A8EQS3 Putative uncharacterized protein; PFAM: OmpA family
YP_003654276.1	COGs: COG3743 conserved hypothetical protein; KEGG: abu:Abu_0026 hypothetical protein; SPTR: A8EQS4 Putative uncharacterized protein
YP_003654277.1	COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR000106:IPR017867; KEGG: abu:Abu_0594 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: A8ESD7 Protein tyrosine phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_003654278.1	COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: abu:Abu_1765 putative nitrilase/cyanide hydratase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: A8EVN8 Putative uncharacterized protein; PFAM: Carbon-nitrogen hydrolase
YP_003654279.1	COGs: COG1109 Phosphomannomutase; InterProIPR005841:IPR016055:IPR016066:IPR001579:IPR 005844:IPR005845:IPR005846:IPR005843; KEGG: sun:SUN_1934 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; PRIAM: Phosphomannomutase; SPTR: C1ZZL7 Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_003654280.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: ppd:Ppro_1992 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A1AQI0 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator
YP_003654281.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: tdn:Suden_0616 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BL93 Two component transcriptional regulator, winged helix family, putative; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654282.1	COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR005467:IPR011623:IPR011495; KEGG: tcx:Tcr_1062 diguanylate cyclase; PFAM: Diverse 7TM receptor transmembrane region; histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SPTR: Q31GR6 Diguanylate cyclase (GGDEF domain); PFAM: Histidine kinase; 7TM diverse intracellular signalling; 7TMR-DISM extracellular 2
YP_003654283.1	COGs: COG0014 Gamma-glutamyl phosphate reductase; InterProIPR016161:IPR020593:IPR016162:IPR016163:IPR 012134:IPR000965; KEGG: abu:Abu_1757 gamma-glutamyl phosphate reductase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: A8EVN0 Gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_003654284.1	COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR003660; KEGG: mgm:Mmc1_1821 adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SPTR: A0L8N6 Adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain
YP_003654285.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR011032:IPR016040:IPR013154:IPR013149:IPR 014188; KEGG: pcr:Pcryo_1784 zinc-binding alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Q1Q9U2 Alcohol dehydrogenase, zinc-binding; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family
YP_003654286.1	KEGG: sfr:Sfri_3895 hypothetical protein; SPTR: Q07W94 Putative uncharacterized protein
YP_003654287.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abu:Abu_0028 hypothetical protein; PFAM: helix-turn-helix HxlR type; SPTR: A8EQS6 Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix
YP_003654288.1	COGs: COG0390 ABC-type uncharacterized transport system permease component; InterPro IPR005226; KEGG: kko:Kkor_0960 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: B6BLG4 ABC-type transport system, permease component; PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: conserved hypothetical protein TIGR00245
YP_003654289.1	COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterProIPR008927:IPR016040:IPR006168:IPR013328:IPR 011128:IPR006109; KEGG: abu:Abu_0029 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; PRIAM: Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); SPTR: A8EQS7 Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_003654290.1	InterPro IPR000835:IPR011991; KEGG: lwe:lwe2757 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A0AME3 Complete genome; PFAM: MarR family
YP_003654291.1	COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterProIPR003789:IPR017958:IPR006075:IPR006107:IPR 018027:IPR004413; KEGG: abu:Abu_0030 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; SPTR: A8EQS8 Glutamyl-tRNA(Gln) amidotransferase, subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
YP_003654292.1	InterPro IPR000215:IPR015391; KEGG: abu:Abu_0031 hypothetical protein; PFAM: SurA domain; SPTR: A8EQS9 Putative uncharacterized protein; PFAM: SurA N-terminal domain
YP_003654293.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR009051:IPR017900:IPR 016167:IPR012285:IPR017896:IPR006094:IPR004113:IPR001450; KEGG: abu:Abu_0032 oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein; PFAM: FAD linked oxidase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: A8EQR2 Oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_003654295.1	COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: pin:Ping_3148 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A1SZC1 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_003654296.1	COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: pin:Ping_3149 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: A1SZC2 Tripartite ATP-independent periplasmic transporter, DctQ component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_003654297.1	COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: pin:Ping_3150 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A1SZC3 TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7
YP_003654298.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR011006:IPR016032:IPR011991:IPR001789:IPR 001867; KEGG: abu:Abu_0034 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EQR4 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654299.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR000014:IPR005467:IPR 000700:IPR013656; KEGG: abu:Abu_0035 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: A8EQR5 Two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ABC transporter substrate binding protein; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box
YP_003654300.1	COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: abu:Abu_0036 hypothetical protein; PFAM: protein of unknown function DUF162; SPTR: A8EQR6 Putative uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556
YP_003654301.1	COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterProIPR009051:IPR017900:IPR012285:IPR017896:IPR 003741; KEGG: abu:Abu_0037 iron-sulfur cluster binding protein, putative; PFAM: protein of unknown function DUF162; SPTR: A8EQR7 Iron-sulfur cluster binding protein, putative; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: 2[4Fe-4S] protein, putative
YP_003654302.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: abu:Abu_0038 Fe-S oxidoreductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A8EQR8 Fe-S oxidoreductase; PFAM: Cysteine-rich domain
YP_003654303.1	KEGG: tdn:Suden_0164 hypothetical protein; SPTR: C2A059 Putative uncharacterized protein
YP_003654304.1	COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR016193:IPR016192:IPR016473:IPR002125; KEGG: tdn:Suden_0147 CMP/dCMP deaminase, zinc-binding; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Q30UA3 CMP/dCMP deaminase, zinc-binding; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003654305.1	COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249:IPR011053:IPR000089; KEGG: abu:Abu_0040 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: A8EQV1 Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_003654306.1	COGs: COG0439 Biotin carboxylase; InterProIPR011054:IPR016185:IPR005479:IPR013817:IPR 013816:IPR011761:IPR011764:IPR005481:IPR005482:IPR004549; KEGG: abu:Abu_0041 biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: A8EQV2 Acetyl CoA carboxylase, biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase
YP_003654307.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR000629:IPR014001:IPR001650:IPR014021:IPR 014014:IPR011545; KEGG: abu:Abu_0042 DEAD-box ATP dependent DNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8EQV3 ATP-dependent RNA helicase, DEAD box family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003654309.1	COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: abu:Abu_0043 phosphate permease, putative; PFAM: phosphate transporter; SPTR: A8EQV4 Phosphate permease, putative; PFAM: Phosphate transporter family
YP_003654310.1	COGs: COG0679 permease; InterPro IPR004776; KEGG: nis:NIS_1317 hypothetical protein; PFAM: Auxin Efflux Carrier; SPTR: A6Q4L6 Putative uncharacterized protein; PFAM: Membrane transport protein
YP_003654311.1	COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR014729:IPR017932:IPR000583:IPR001962:IPR 006426; KEGG: abu:Abu_0045 asparagine synthetase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: A8EQV6 Asparagine synthetase (Glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_003654312.1	KEGG: tdn:Suden_1937 hypothetical protein; SPTR: Q30P70 Putative uncharacterized protein
YP_003654313.1	KEGG: hypothetical protein; SPTR: Q231E8 Putative uncharacterized protein
YP_003654314.1	COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR009051:IPR001041:IPR006058:IPR017900:IPR 012675:IPR012285:IPR017896:IPR004489; KEGG: tdn:Suden_0038 succinate dehydrogenase/fumarate reductase iron-sulfur protein; PFAM: ferredoxin; SPTR: B6BH33 Fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_003654315.1	COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR013027:IPR015939:IPR003953:IPR004112; KEGG: tdn:Suden_0037 succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: Q30UL3 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: domain; FAD binding domain
YP_003654316.1	KEGG: abu:Abu_0046 hypothetical protein; SPTR: A8EQV7 Putative uncharacterized protein
YP_003654317.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006140:IPR006139; KEGG: abu:Abu_0274 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: A8ERH5 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_003654318.1	COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714; KEGG: abu:Abu_0047 PhoH family protein; PFAM: PhoH family protein; SPTR: A8EQV8 PhoH family protein; PFAM: PhoH-like protein
YP_003654319.1	COGs: COG1981 membrane protein; InterPro IPR005265:IPR014351; KEGG: abu:Abu_0048 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8EQV9 Conserved hypothetical integral membrane protein; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: conserved hypothetical integral membrane protein
YP_003654320.1	COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593:IPR003959; KEGG: abu:Abu_0049 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A8EQW0 ATPase, AAA family protein; PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus
YP_003654321.1	COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterProIPR020103:IPR018496:IPR002942:IPR006145:IPR 000748; KEGG: abu:Abu_0050 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; SPTR: A8EQW1 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase family
YP_003654322.1	COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR003016:IPR000644:IPR001347:IPR004800; KEGG: abu:Abu_0051 carbohydrate isomerase KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; PRIAM: Arabinose-5-phosphate isomerase; SMART: CBS domain containing protein; SPTR: A8EQW2 Carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein
YP_003654323.1	COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; InterPro IPR001587:IPR011108:IPR004613; KEGG: abu:Abu_0052 hypothetical protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: A8EQW3 Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein
YP_003654324.1	COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR020596:IPR020598:IPR001737:IPR011530; KEGG: abu:Abu_0053 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: A8EQW4 Dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_003654325.1	COGs: COG0107 Imidazoleglycerol-phosphate synthase; InterPro IPR011060:IPR013785:IPR006062:IPR004651; KEGG: abu:Abu_0054 imidazole glycerol phosphate synthase subunit HisF; PFAM: histidine biosynthesis protein; SPTR: A8EQW5 Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_003654326.1	KEGG: abu:Abu_0055 hypothetical protein; SPTR: A8EQW6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541)
YP_003654327.1	InterPro IPR000845; KEGG: abu:Abu_0056 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: A8EQW7 Putative uncharacterized protein; PFAM: Phosphorylase superfamily
YP_003654328.1	COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR006638:IPR004383:IPR007197; KEGG: abu:Abu_0057 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EQW8 Ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family
YP_003654329.1	COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR020060:IPR008925:IPR001412:IPR014729:IPR 020061:IPR020751:IPR020058:IPR004527; KEGG: abu:Abu_0058 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: A8EQW9 Glutamyl-tRNA synthetase 1; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_003654330.1	InterPro IPR006121; KEGG: tdn:Suden_0772 heavy metal transport/detoxification protein; SPTR: Q30SI0 Heavy metal transport/detoxification protein
YP_003654331.1	COGs: COG2217 Cation transport ATPase; InterProIPR001757:IPR001756:IPR006121:IPR018303:IPR 017969:IPR000150:IPR008250:IPR005834:IPR006403:IPR006416; KEGG: ccv:CCV52592_0531 copper-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: C6RIF9 Copper-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_003654332.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: abu:Abu_0060 two-component response regulator; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; SPTR: A8EQX1 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654333.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR003661:IPR005467; KEGG: abu:Abu_0061 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EQX2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003654334.1	KEGG: abu:Abu_0062 hypothetical protein; SPTR: A8EQX3 Putative uncharacterized protein
YP_003654335.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0063 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: A8EQX4 Putative uncharacterized protein; PFAM: Outer membrane efflux protein
YP_003654336.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: abu:Abu_0064 cation efflux system, membrane fusion protein; SPTR: A8EQX5 Cation efflux system, membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit
YP_003654337.1	COGs: COG3696 Putative silver efflux pump; InterPro IPR001036:IPR004763; KEGG: abu:Abu_0065 heavy metal efflux pump; PFAM: acriflavin resistance protein; SPTR: A8EQX6 Heavy metal efflux pump; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_003654338.1	KEGG: sfr:Sfri_2413 hypothetical protein; SPTR: Q080Q7 Putative uncharacterized protein; TIGRFAM: pentapeptide MXKDX repeat protein
YP_003654339.1	COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: gsu:GSU2653 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Q749T9 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_003654340.1	COGs: COG0460 Homoserine dehydrogenase; InterProIPR016040:IPR019811:IPR016204:IPR005106:IPR 001342:IPR002912; KEGG: abu:Abu_0158 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; PRIAM: Homoserine dehydrogenase; SPTR: A8ER68 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain
YP_003654341.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR015424:IPR015421:IPR004839; KEGG: abu:Abu_0157 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A8ER67 Aspartate aminotransferase, aminotransferase, classes I and II; PFAM: Aminotransferase class I and II
YP_003654342.1	KEGG: abu:Abu_0156 hypothetical protein; SPTR: A8ER66 Putative uncharacterized protein
YP_003654343.1	COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: abu:Abu_0155 TrmH family tRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: A8ER65 tRNA methyltransferase, TrmH family; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_003654344.1	COGs: COG0313 methyltransferase; InterPro IPR000878:IPR018063:IPR014777:IPR008189; KEGG: abu:Abu_0154 putative methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: A8ER64 Putative uncharacterized protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: conserved hypothetical protein TIGR00096
YP_003654345.1	COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: abu:Abu_0153 50S ribosomal protein L31; PFAM: ribosomal protein L31; SPTR: A8ER63 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_003654346.1	COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR002627:IPR018022; KEGG: abu:Abu_0152 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: A8ER62 tRNA Delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA)
YP_003654347.1	COGs: COG0388 amidohydrolase; InterPro IPR003010:IPR016181:IPR000463:IPR000182; KEGG: cts:Ctha_0190 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N-acetyltransferase; SPTR: B3QT18 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase
YP_003654348.1	COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR006371; KEGG: abu:Abu_0150 prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: A8ER60 4-hydroxybenzoate octaprenyltranferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase
YP_003654349.1	KEGG: abu:Abu_1709 hypothetical protein; SPTR: B6GDZ7 Putative uncharacterized protein
YP_003654350.1	InterPro IPR010056; KEGG: apr:Apre_1793 phage replisome organizer; PFAM: replisome organizer putative region; SPTR: C7RI59 Phage replisome organizer; TIGRFAM: phage replisome organizer; PFAM: N-terminal phage replisome organiser (Phage_rep_org_N); TIGRFAM: phage replisome organizer, putative, N-terminal region
YP_003654351.1	KEGG: DNAJ protein; SPTR: C5REK4 Lantibiotic dehydratase domain protein
YP_003654352.1	InterPro IPR007688; KEGG: wsu:WS1098 hypothetical protein; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; SPTR: Q7MRR5 Putative uncharacterized protein; PFAM: TrbL/VirB6 plasmid conjugal transfer protein
YP_003654353.1	KEGG: viral A-type inclusion protein; SPTR: A2F531 Viral A-type inclusion protein, putative
YP_003654354.1	KEGG: bcg:BCG9842_B0597 hypothetical protein; SPTR: Q817L2 Putative uncharacterized protein
YP_003654355.1	KEGG: hypothetical protein; SPTR: A0DR44 Chromosome undetermined scaffold_6, whole genome shotgun sequence
YP_003654356.1	KEGG: sbp:Sbal223_2179 hypothetical protein; SPTR: B8EES1 Putative uncharacterized protein
YP_003654357.1	InterPro IPR005182; KEGG: pin:Ping_2576 membrane-flanked domain-containing protein; PFAM: membrane-flanked domain; SPTR: A1SXT2 Membrane-flanked domain; PFAM: Bacterial membrane flanked domain
YP_003654358.1	KEGG: pmi:PMT9312_0461 apocytochrome f; SPTR: B5RPZ7 Heat shock protein
YP_003654359.1	KEGG: hypothetical protein; SPTR: Q54TM4 Putative uncharacterized protein
YP_003654361.1	KEGG: vha:VIBHAR_04938 hypothetical protein; SPTR: A6AK10 Putative uncharacterized protein
YP_003654362.1	KEGG: cbl:CLK_A0086 hypothetical protein; SPTR: B6SBW0 Putative uncharacterized protein
YP_003654363.1	COGs: COG2856 Zn peptidase; InterPro IPR010359; KEGG: rlt:Rleg2_3868 protein of unknown function DUF955; PFAM: protein of unknown function DUF955; SPTR: B5ZUD7 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF955)
YP_003654364.1	KEGG: lbl:LBL_0729 hypothetical protein; SPTR: Q054F3 Putative uncharacterized protein
YP_003654365.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR013762:IPR002104; KEGG: sun:SUN_2452 phage integrase family site specific recombinase; PFAM: integrase family protein; SPTR: A6QD27 Site-specific recombinase, phage integrase family; PFAM: Phage integrase family
YP_003654366.1	KEGG: lbf:LBF_1603 sensor histidine kinase of a two component response regulator; SPTR: A8UEY5 Possible sensor protein
YP_003654367.1	KEGG: hypothetical protein; SPTR: A2G0B3 Putative uncharacterized protein
YP_003654368.1	KEGG: reh:H16_A0885 hypothetical protein; SPTR: B0G6Z4 Putative uncharacterized protein; PFAM: Sulfolobus plasmid regulatory protein
YP_003654369.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR008271:IPR002290:IPR020635:IPR 000719:IPR017442; KEGG: drm:Dred_0786 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A4J2M1 Protein kinase; PFAM: Protein kinase domain
YP_003654370.1	KEGG: reh:H16_A0883 hypothetical protein; SPTR: B0G6Z6 Putative uncharacterized protein
YP_003654371.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: tpd:Teth39_1314 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: C6PE61 Protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C
YP_003654372.1	COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR017909:IPR018389:IPR006311; KEGG: tcx:Tcr_1416 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: Q31FR3 Tripartite ATP-independent periplasmic (TRAP-T) transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003654373.1	COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: tcx:Tcr_1415 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Q31FR4 Tripartite ATP-independent periplasmic (TRAP-T) transporter, DctQ subunit; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_003654374.1	COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: tcx:Tcr_1414 TRAP dicarboxylate transporter-DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q31FR5 Tripartite ATP-independent periplasmic (TRAP-T) transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_003654375.1	COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: tcx:Tcr_1413 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Q31FR6 Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_003654376.1	InterPro IPR002781; KEGG: tcx:Tcr_1412 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Q31FR7 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE
YP_003654377.1	KEGG: abu:Abu_1173 hypothetical protein; SPTR: A8EU09 Putative uncharacterized protein
YP_003654378.1	KEGG: tko:TK0357 hypothetical protein; SPTR: Q5JCW8 Hypothetical membrane protein, conserved
YP_003654379.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR009082:IPR000014:IPR 001610:IPR005467:IPR000700:IPR013767; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: A8EVB1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003654380.1	COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: vvu:VV2_0872 ABC-type sugar transport system, periplasmic component; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: A4U487 ABC-type sugar transport system, periplasmic component; PFAM: family
YP_003654381.1	COGs: COG3769 hydrolase (HAD superfamily); InterPro IPR013200:IPR006379:IPR006381; KEGG: pcr:Pcryo_2501 HAD family hydrolase YedP; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: Q1Q7R2 HAD-superfamily hydrolase YedP; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase-related protein; mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; mannosyl-3-phosphoglycerate phosphatase
YP_003654382.1	COGs: COG2379 Putative glycerate kinase; InterPro IPR007835; KEGG: pmx:PERMA_1579 putative hydroxypyruvate reductase; PFAM: MOFRL domain protein; PRIAM: Glycerate kinase; SPTR: C0QRQ0 Putative hydroxypyruvate reductase; PFAM: MOFRL family
YP_003654383.1	KEGG: pcr:Pcryo_2502 putative glycosyltransferase; SPTR: Q1Q7R1 Putative uncharacterized protein
YP_003654384.1	COGs: COG0366 Glycosidase; InterProIPR017853:IPR013781:IPR006589:IPR016377:IPR 006047; KEGG: lmc:Lm4b_02813 sucrose phosphorylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: A6DP96 Sucrose phosphorylase; PFAM: Alpha amylase, catalytic domain
YP_003654385.1	COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835:IPR005771; KEGG: abu:Abu_0839 UTP--glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: A8ET30 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase
YP_003654386.1	COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase; InterPro IPR001282:IPR016040; KEGG: mmw:Mmwyl1_1038 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; PRIAM: Glucose-6-phosphate dehydrogenase; SPTR: A6VU40 Glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_003654387.1	COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR005900; KEGG: saz:Sama_1811 6-phosphogluconolactonase; SPTR: A1S6L0 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase
YP_003654388.1	COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558:IPR000581:IPR004786; KEGG: cjd:JJD26997_1271 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Phosphogluconate dehydratase; SPTR: A7H495 Phosphogluconate dehydratase; TIGRFAM: 6-phosphogluconate dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; 6-phosphogluconate dehydratase
YP_003654389.1	COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887:IPR013785; KEGG: hpa:HPAG1_1037 2-keto-3-deoxy-6-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; PRIAM: 2-dehydro-3-deoxy-phosphogluconate aldolase; SPTR: Q1CSG8 2-keto-3-deoxy-6-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_003654390.1	COGs: COG0033 Phosphoglucomutase; InterProIPR016055:IPR016066:IPR005844:IPR005845:IPR 005846:IPR005843:IPR005852; KEGG: sun:SUN_1277 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: A6Q9S1 Phosphoglucomutase, alpha-D-glucose phosphate-specific; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific
YP_003654391.1	COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672; KEGG: tdn:Suden_1472 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: B6BKK2 Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase
YP_003654392.1	COGs: COG3272 conserved hypothetical protein; InterPro IPR017087:IPR007553:IPR013560; KEGG: abu:Abu_0835 hypothetical protein; PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; SPTR: A8ET26 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722)
YP_003654393.1	InterPro IPR007352; KEGG: tdn:Suden_1805 hypothetical protein; PFAM: protein of unknown function DUF420; SPTR: Q30PK2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF420)
YP_003654394.1	COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013991:IPR013987:IPR013988; KEGG: tcx:Tcr_1109 PhnA protein; PFAM: PhnA protein; SMART: PhnA protein; SPTR: Q31GL9 PhnA protein; PFAM: PhnA protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA
YP_003654395.1	COGs: COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase); InterProIPR016185:IPR011054:IPR013817:IPR013815:IPR 013816:IPR011761:IPR003135:IPR005862; KEGG: abu:Abu_0145 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; SPTR: A8ER56 Phosphoribosylglycinamide formyltransferase 2; TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-grasp domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2
YP_003654396.1	COGs: COG2992 Uncharacterized FlgJ-related protein; InterPro IPR013338:IPR002901; KEGG: nam:NAMH_0062 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; SPTR: A6DCY7 Putative periplasmic protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
YP_003654397.1	COGs: COG0253 Diaminopimelate epimerase; InterPro IPR018510:IPR001653; KEGG: abu:Abu_0144 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; PRIAM: Diaminopimelate epimerase; SPTR: A8ER55 Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_003654398.1	COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: abu:Abu_0143 dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: A8ER54 Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_003654399.1	COGs: COG0421 Spermidine synthase; InterPro IPR001045; KEGG: abu:Abu_0142 spermidine synthase; PFAM: Spermine synthase; SPTR: A8ER53 Spermidine synthase; PFAM: Spermine/spermidine synthase
YP_003654400.1	COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR016188:IPR010918:IPR000728:IPR004733; KEGG: abu:Abu_0141 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: A8ER52 Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_003654401.1	InterPro IPR006622:IPR018967:IPR010693; KEGG: mbu:Mbur_2272 hypothetical protein; PFAM: Iron sulphur domain-containing, CDGSH-type; protein of unknown function DUF1271; SMART: zinc finger CDGSH-type domain protein; SPTR: Q12TU4 Zinc finger domain-containing protein; PFAM: Iron-binding zinc finger CDGSH type; Protein of unknown function (DUF1271)
YP_003654402.1	COGs: COG3384 conserved hypothetical protein; InterPro IPR004183:IPR014436; KEGG: abu:Abu_0138 LigB family protein; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: A8ER49 Putative uncharacterized protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase
YP_003654403.1	COGs: COG1846 Transcriptional regulators; InterPro IPR011991:IPR000835; KEGG: abu:Abu_0136 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A8ER47 Transcriptional regulator, MarR family; PFAM: MarR family
YP_003654404.1	COGs: COG1741 Pirin-related protein; InterPro IPR011051:IPR012093:IPR003829; KEGG: abu:Abu_0139 pirin; PFAM: Pirin domain protein; SPTR: A8ER50 Pirin; PFAM: Pirin
YP_003654405.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: abu:Abu_1537 putative FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: A8EV13 Putative FMN reductase; PFAM: NADPH-dependent FMN reductase
YP_003654406.1	COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: tdn:Suden_2032 YceI; PFAM: YceI family protein; SPTR: Q30NX5 YceI; PFAM: YceI-like domain
YP_003654407.1	KEGG: sml:Smlt3655 putative histone protein; SPTR: A6G958 Putative uncharacterized protein
YP_003654408.1	COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR015424:IPR020578:IPR015421:IPR000192; KEGG: abu:Abu_0134 putative aminotransferase; PFAM: aminotransferase class V; SPTR: A8ER45 Putative aminotransferase; PFAM: Aminotransferase class-V
YP_003654409.1	COGs: COG0124 Histidyl-tRNA synthetase; InterPro IPR002314; KEGG: abu:Abu_0133 ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II (G H P and S); SPTR: A8ER44 Putative uncharacterized protein
YP_003654410.1	COGs: COG0104 Adenylosuccinate synthase; InterPro IPR018220:IPR001114; KEGG: abu:Abu_0132 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: A8ER43 Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_003654411.1	COGs: COG2952 conserved hypothetical protein; InterPro IPR007463; KEGG: abu:Abu_0131 hypothetical protein; PFAM: protein of unknown function DUF507; SPTR: A8ER42 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF507)
YP_003654412.1	COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR001317:IPR011702:IPR002474:IPR017926:IPR 000991:IPR006274; KEGG: abu:Abu_0130 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: A8ER41 Carbamoylphosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_003654413.1	InterPro IPR018490:IPR014710:IPR000595; KEGG: tye:THEYE_A0034 putative nucleotidyltransferase family; PFAM: cyclic nucleotide-binding; SPTR: C2CK26 Transcriptional regulator; PFAM: Cyclic nucleotide-binding domain
YP_003654414.1	COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: abu:Abu_0128 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A; SPTR: A8ER39 Phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A
YP_003654415.1	InterPro IPR011006:IPR001789; KEGG: abu:Abu_0127 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ER38 Two-component response regulator; PFAM: Response regulator receiver domain
YP_003654416.1	COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR003526:IPR002363:IPR020555:IPR001228; KEGG: abu:Abu_0126 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; PRIAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase., 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: A8ER37 Bifunctional enzyme ispD/ispF; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_003654417.1	COGs: COG1639 signal transduction protein; InterPro IPR013976; KEGG: abu:Abu_0734 hypothetical protein; PFAM: Metal-dependent hydrolase HDOD; SPTR: A8ESS5 Putative uncharacterized protein; PFAM: HDOD domain
YP_003654418.1	KEGG: hypothetical protein; SPTR: Q7RG16 Putative uncharacterized protein PY04535; PFAM: GGDEF domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003654419.1	COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: abu:Abu_0124 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: A8ER35 Thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_003654420.1	KEGG: sun:SUN_0227 hypothetical protein; SPTR: A6Q6S8 Putative uncharacterized protein
YP_003654421.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR002744:IPR019591; KEGG: abu:Abu_0123 ATP/GTP-binding protein; PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; SPTR: A8ER34 ATP/GTP-binding protein; PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
YP_003654422.1	COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterProIPR015424:IPR000209:IPR000277:IPR015421:IPR 015422; KEGG: abu:Abu_1723 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: Cystathionine gamma-lyase; SPTR: A8EVJ7 Cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_003654423.1	COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR015424:IPR015421:IPR000277; KEGG: abu:Abu_1724 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: A8EVJ8 Cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_003654424.1	InterPro IPR011394; KEGG: abu:Abu_1402 hypothetical protein; SPTR: A8EUN3 Putative uncharacterized protein; PFAM: MazG nucleotide pyrophosphohydrolase domain
YP_003654426.1	COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496:IPR008179; KEGG: abu:Abu_0121 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; SPTR: A8ER32 Bifunctional phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_003654427.1	KEGG: major antigen; SPTR: Q6XYT3 Chromosome segregation ATPase
YP_003654428.1	COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR000163:IPR001107; KEGG: abu:Abu_0119 band 7 family protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: A8ER30 Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family
YP_003654429.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544:IPR005785; KEGG: abu:Abu_0118 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; SPTR: A8ER29 Branched-chain amino-acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I
YP_003654430.1	InterPro IPR015985; KEGG: amr:AM1_5706 hypothetical protein; PFAM: Tellurite resistance methyltransferase, TehB, core; SPTR: C2A021 Putative uncharacterized protein; PFAM: Tellurite resistance protein TehB
YP_003654431.1	COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR003726:IPR011005:IPR004223:IPR006158:IPR 003759:IPR000489:IPR011822; KEGG: abu:Abu_0117 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; SPTR: A8ER28 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: methionine synthase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase
YP_003654432.1	InterPro IPR000620; KEGG: cff:CFF8240_0754 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A4BKK0 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_003654433.1	COGs: COG3647 membrane protein; InterPro IPR014509; KEGG: sun:SUN_1160 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q1YYD4 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2238)
YP_003654434.1	COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746; KEGG: rbi:RB2501_11032 glutamine synthetase II; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: A2TUQ0 Glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain
YP_003654435.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR009057:IPR018062:IPR012287:IPR018060:IPR 003313:IPR000005; KEGG: vfm:VFMJ11_1150 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; SPTR: A6DBM1 Transcriptional regulator, AraC family protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_003654436.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: cps:CPS_3087 amino acid transporter LysE; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q47ZI5 Transporter, LysE family; PFAM: LysE type translocator
YP_003654437.1	KEGG: abu:Abu_0115 hypothetical protein; SPTR: A8ER26 Putative uncharacterized protein
YP_003654438.1	COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: abu:Abu_0113 hypothetical protein; PFAM: protein of unknown function DUF752; SPTR: A8ER24 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF752)
YP_003654439.1	COGs: COG1854 LuxS protein involved in autoinducer AI2 synthesis; InterPro IPR003815:IPR011249; KEGG: abu:Abu_0111 S-ribosylhomocysteinase; PFAM: LuxS protein; PRIAM: S-ribosylhomocysteine lyase; SPTR: A8ER22 S-ribosylhomocysteine lyase; PFAM: S-Ribosylhomocysteinase (LuxS)
YP_003654440.1	KEGG: avn:Avin_48710 hypothetical protein; SPTR: C1DK66 Putative uncharacterized protein
YP_003654441.1	KEGG: hypothetical protein; SPTR: Q7RH94 Putative uncharacterized protein PY04095
YP_003654442.1	KEGG: hypothetical protein; SPTR: A7TQ63 Putative uncharacterized protein
YP_003654443.1	COGs: COG3864 conserved hypothetical protein; KEGG: sun:SUN_1504 hypothetical protein; SPTR: A6QAE6 Putative uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201)
YP_003654444.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: sun:SUN_1058 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_5; SPTR: A6Q956 Putative uncharacterized protein; PFAM: AAA domain (dynein-related subfamily)
YP_003654445.1	KEGG: cdf:CD1250 chromosome partition protein; SPTR: A6ESP5 Fructose-6-phosphate aldolase 2
YP_003654446.1	InterPro IPR012827:IPR016131; KEGG: avn:Avin_01310 hemerythrin-like, metal binding protein; SPTR: B6BLR2 Hemerythrin HHE cation binding domain subfamily, putative; TIGRFAM: hemerythrin-like metal-binding protein; TIGRFAM: hemerythrin-like metal-binding domain
YP_003654447.1	COGs: COG1489 DNA-binding protein stimulates sugar fermentation; InterPro IPR005224; KEGG: gur:Gura_1121 sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; SPTR: A5GAS3 Sugar fermentation stimulation protein homolog; TIGRFAM: sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein
YP_003654448.1	COGs: COG3180 Putative ammonia monooxygenase; InterPro IPR007820:IPR017516; KEGG: abu:Abu_0104 putative ammonia monooxygenase; PFAM: putative ammonia monooxygenase; SPTR: A8ER15 Putative uncharacterized protein; TIGRFAM: membrane protein AbrB duplication; PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication
YP_003654449.1	COGs: COG0288 Carbonic anhydrase; InterPro IPR001765:IPR015892; KEGG: abu:Abu_0103 carbonic anhydrase; PFAM: carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: A8ER14 Carbonic anhydrase; PFAM: Carbonic anhydrase
YP_003654450.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR004358:IPR003594:IPR005467:IPR000014; KEGG: abu:Abu_0102 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ER13 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; PAS domain S-box
YP_003654451.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: abu:Abu_0101 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ER12 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654452.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: abu:Abu_0100 putative tricarboxylic transport protein TctA; PFAM: protein of unknown function DUF112 transmembrane; SPTR: A8ER11 Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctA family
YP_003654453.1	KEGG: abu:Abu_0099 putative tricarboxylic transport protein TctB; SPTR: A8ER10 Putative uncharacterized protein
YP_003654454.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: abu:Abu_0098 putative tricarboxylic transport protein TctC; PFAM: conserved hypothetical protein; SPTR: A8ER09 Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter family receptor
YP_003654455.1	COGs: COG4271 nucleotide-binding protein containing TIR -like domain; InterPro IPR014571:IPR019302; KEGG: vvu:VV1_2473 nucleotide-binding protein; PFAM: Nucleotide-binding protein, predicted, TIR-like; SPTR: A4CFM1 Predicted nucleotide-binding protein; PFAM: Predicted nucleotide-binding protein containing TIR-like domain
YP_003654456.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: tdn:Suden_0099 pyruvate flavodoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: Q30UF1 Pyruvate:acceptor oxidoreductase beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003654457.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR009014:IPR015941:IPR002880; KEGG: sun:SUN_0200 pyruvate flavodoxin oxidoreductase subunit alpha; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: A6Q6Q1 Pyruvate:ferredoxin oxidoreductase, alpha subunit; PFAM: domain
YP_003654458.1	COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit; InterPro IPR017900:IPR017896:IPR001450:IPR011898; KEGG: nis:NIS_1604 pyruvate flavodoxin oxidoreductase subunit delta; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6Q5F1 Pyruvate:ferredoxin oxidoreductase, delta subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family
YP_003654459.1	COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR002869:IPR019752:IPR011894; KEGG: nis:NIS_1605 pyruvate flavodoxin oxidoreductase subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: A6Q5F2 Pyruvate:ferredoxin oxidoreductase, gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
YP_003654460.1	COGs: COG0546 phosphatase; InterPro IPR005834:IPR006439; KEGG: abu:Abu_0097 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8ER08 Putative uncharacterized protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_003654461.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: abu:Abu_0096 oligopeptide ABC transporter, periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: A8ER07 Oligopeptide ABC transporter, periplasmic substrate-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003654462.1	COGs: COG0103 Ribosomal protein S9; InterPro IPR020568:IPR020574:IPR014721:IPR000754; KEGG: abu:Abu_0095 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: A8ER06 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16
YP_003654463.1	COGs: COG0102 Ribosomal protein L13; InterPro IPR005822:IPR005823; KEGG: abu:Abu_0094 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: A8ER05 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_003654464.1	COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003594:IPR009082:IPR003661:IPR005467; KEGG: abu:Abu_0093 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: A8ER04 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003654465.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR011991:IPR001789:IPR001867; KEGG: abu:Abu_0092 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ER03 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654466.1	KEGG: abu:Abu_0091 hypothetical protein; SPTR: A8ER02 Putative uncharacterized protein
YP_003654467.1	COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: abu:Abu_0090 phosphate transport system regulatory protein PhoU, putative; PFAM: PhoU family protein; SPTR: A8ER01 Phosphate transport system regulatory protein PhoU, putative; PFAM: PhoU domain
YP_003654468.1	COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000160:IPR000644; KEGG: abu:Abu_0086 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A8EQZ7 EAL/GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003654469.1	COGs: COG0216 Protein chain release factor A; InterPro IPR000352:IPR005139:IPR004373; KEGG: abu:Abu_0083 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: A8EQZ4 Peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_003654470.1	InterPro IPR002583; KEGG: abu:Abu_0082 30S ribosomal protein S20; PFAM: ribosomal protein S20; SPTR: A8EQZ3 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_003654471.1	COGs: COG1109 Phosphomannomutase; InterProIPR005841:IPR016055:IPR016066:IPR005844:IPR 005845:IPR005846:IPR005843:IPR006352; KEGG: abu:Abu_0081 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: A8EQZ2 Phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase
YP_003654472.1	COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: abu:Abu_0080 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: A8EQZ1 Lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_003654473.1	COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterProIPR001030:IPR018136:IPR015931:IPR015932:IPR 011826:IPR006251; KEGG: abu:Abu_0079 3-isopropylmalate dehydratase large subunit; PFAM: aconitate hydratase domain protein; SPTR: A8EQZ0 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein
YP_003654474.1	COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: abu:Abu_0078 molybdopterin-guanine dinucleotide biosynthesis protein; SPTR: A8EQY9 Molybdopterin-guanine dinucleotide biosynthesis protein
YP_003654475.1	COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: abu:Abu_0074 50S ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: A8EQY5 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_003654476.1	InterPro IPR001706:IPR018265; KEGG: abu:Abu_0073 50S ribosomal protein L35; PFAM: ribosomal protein L35; SPTR: A8EQY4 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_003654477.1	COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR019813:IPR001288:IPR019815:IPR019814; KEGG: abu:Abu_0072 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; SPTR: A8EQY3 Translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_003654478.1	COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR006195:IPR002320:IPR018158:IPR018163:IPR 004154:IPR012947:IPR002314; KEGG: abu:Abu_0071 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; Anticodon-binding domain protein; SPTR: A8EQY2 Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase
YP_003654479.1	KEGG: abu:Abu_0070 hypothetical protein; SPTR: A8EQY1 Putative uncharacterized protein
YP_003654480.1	COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: abu:Abu_0067 fibronectin/fibrinogen-binding protein, putative; PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; SPTR: A8EQX8 Fibronectin/fibrinogen-binding protein, putative; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA)
YP_003654481.1	COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: abu:Abu_0160 CDP-diglyceride synthetase CdsA; PFAM: phosphatidate cytidylyltransferase; SPTR: A8ER70 Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family
YP_003654482.1	COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821:IPR016040:IPR013512:IPR013644; KEGG: abu:Abu_0161 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: A8ER71 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_003654483.1	KEGG: abu:Abu_0162 hypothetical protein; SPTR: A8ER72 Putative uncharacterized protein
YP_003654484.1	InterPro IPR011460; KEGG: cja:CJA_0343 rhs repeat family; PFAM: protein of unknown function DUF1566; SPTR: B6BMA3 Conserved domain protein; PFAM: Protein of unknown function (DUF1566); TIGRFAM: Fibrobacter succinogenes major paralogous domain
YP_003654485.1	COGs: COG3545 esterase of the alpha/beta hydrolase fold; InterPro IPR010662; KEGG: abu:Abu_0163 hypothetical protein; PFAM: protein of unknown function DUF1234; SPTR: A8ER73 Putative uncharacterized protein; PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234)
YP_003654486.1	COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR017860:IPR017861:IPR000905; KEGG: abu:Abu_0164 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: A8ER74 Probable O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: metalloendopeptidase, putative, glycoprotease family
YP_003654487.1	COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950:IPR017228; KEGG: abu:Abu_0165 hypothetical protein; PFAM: translation initiation factor SUI1; SPTR: A8ER75 Putative uncharacterized protein; PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic
YP_003654488.1	COGs: COG0063 sugar kinase; InterPro IPR000631:IPR004443:IPR017953; KEGG: abu:Abu_0166 putative carbohydrate kinase; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; SPTR: A8ER76 Putative uncharacterized protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related
YP_003654489.1	COGs: COG1324 conserved hypothetical protein involved in tolerance to divalent cations; InterPro IPR011322:IPR004323; KEGG: abu:Abu_0167 periplasmic protein; PFAM: CutA1 divalent ion tolerance protein; SPTR: A8ER77 Conserved hypothetical periplasmic protein; PFAM: CutA1 divalent ion tolerance protein
YP_003654490.1	COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; InterPro IPR008867:IPR013785; KEGG: abu:Abu_0168 thiazole synthase; PFAM: thiazole biosynthesis family protein; SPTR: A8ER78 Thiazole biosynthesis protein thiG; PFAM: Thiazole biosynthesis protein ThiG
YP_003654491.1	InterPro IPR008407; KEGG: dsa:Desal_2541 branched-chain amino acid transport; PFAM: branched-chain amino acid transport; SPTR: C6BY67 Branched-chain amino acid transport; PFAM: Branched-chain amino acid transport protein (AzlD)
YP_003654492.1	COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: dde:Dde_3176 branched-chain amino acid permease (azaleucine resistance)-like; PFAM: AzlC family protein; SPTR: Q9AME3 Probable branched-chain amino acid transport protein AzlC; PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_003654493.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR018062:IPR009057:IPR003313:IPR 000005:IPR012287; KEGG: pjd:Pjdr2_4187 transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A6DBM1 Transcriptional regulator, AraC family protein; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003654494.1	KEGG: abu:Abu_1867 hypothetical protein; SPTR: B6BII5 Putative uncharacterized protein
YP_003654495.1	InterPro IPR000620; KEGG: swp:swp_4628 membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C0GVI2 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_003654496.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: yen:YE0801 ABC transporter, solute-binding component; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C4SG74 ABC transporter, solute-binding component; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003654497.1	COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035:IPR000408:IPR005925:IPR005924; KEGG: bpy:Bphyt_6362 agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: A8TZY1 Agmatinase; TIGRFAM: agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase
YP_003654498.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: yen:YE0802 ABC transporter, inner-membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C4S0S8 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003654499.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: rlt:Rleg2_4635 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B5ZZV3 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003654500.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: bph:Bphy_5107 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B2JLW6 ABC transporter related; PFAM: ABC transporter
YP_003654501.1	COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: abu:Abu_1053 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1ZY52 Transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003654502.1	COGs: COG3920 Signal transduction histidine kinase; InterPro IPR005467:IPR003594:IPR011623:IPR011495; KEGG: tcx:Tcr_1062 diguanylate cyclase; PFAM: histidine kinase dimerisation/phosphoacceptor; Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; SPTR: Q31GR6 Diguanylate cyclase (GGDEF domain); PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2
YP_003654503.1	KEGG: cyp:PCC8801_0428 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; SPTR: B6BL93 Two component transcriptional regulator, winged helix family, putative
YP_003654504.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_0722 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BL93 Two component transcriptional regulator, winged helix family, putative; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654505.1	KEGG: abu:Abu_1720 hypothetical protein; SPTR: A8EVJ4 Putative uncharacterized protein
YP_003654506.1	COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterProIPR003439:IPR017871:IPR005892:IPR003593:IPR 000644; KEGG: pmr:PMI0412 glycine betaine/L-proline ABC transporter, ATP-binding protein; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; SPTR: B4EUZ3 Glycine betaine/L-proline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit
YP_003654507.1	COGs: COG4176 ABC-type proline/glycine betaine transport system permease component; InterPro IPR000515; KEGG: pmr:PMI0411 glycine betaine transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B4EUZ2 Glycine betaine/L-proline ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003654508.1	COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: vex:VEA_003611 L-proline glycine betaine binding ABC transporter protein ProX/osmotic adaptation; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SPTR: Q1VDW6 ABC superfamily (Glycine/betaine/proline transport protein); PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_003654509.1	COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757:IPR000425; KEGG: bbr:BB0415 transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; SPTR: Q7WQB8 Probable transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family
YP_003654510.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: bpt:Bpet3357 putative secreted protein; PFAM: conserved hypothetical protein; SPTR: A9HX25 Putative secreted protein; PFAM: Tripartite tricarboxylate transporter family receptor
YP_003654511.1	KEGG: fnu:FN2104 hypothetical protein; SPTR: A5TSC6 TTT family tricarboxylate transporter membrane protein
YP_003654512.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: mes:Meso_1067 hypothetical protein; PFAM: protein of unknown function DUF112 transmembrane; SPTR: Q0FTV9 TRAP-T family transporter, fused small and large inner membrane subunits; PFAM: Tripartite tricarboxylate transporter TctA family
YP_003654513.1	COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: bpt:Bpet4448 putative dimethylmenaquinone methyltransferase family protein; PFAM: Dimethylmenaquinone methyltransferase; SPTR: A9IDC7 Putative dimethylmenaquinone methyltransferase family protein; PFAM: Demethylmenaquinone methyltransferase
YP_003654514.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR015424:IPR000192:IPR015421; KEGG: vap:Vapar_3931 aminotransferase class V; PFAM: aminotransferase class V; SPTR: C5CVP2 Aminotransferase class V; PFAM: Aminotransferase class-V
YP_003654515.1	COGs: COG1254 Acylphosphatase; InterPro IPR001792; KEGG: nam:NAMH_0944 acylphosphatase; PFAM: acylphosphatase; SPTR: B6BNZ9 Acylphosphatase; PFAM: Acylphosphatase
YP_003654516.1	COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: maq:Maqu_2297 carbon-phosphorus lyase complex accessory protein; SPTR: C2A2U5 Metal-dependent hydrolase, beta-lactamase superfamily I; PFAM: Metallo-beta-lactamase superfamily
YP_003654517.1	COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: B0AA47 Putative uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_003654518.1	COGs: COG3709 Uncharacterized component of phosphonate metabolism; InterPro IPR008144:IPR008145; KEGG: ara:Arad_0272 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; SPTR: B9J6P7 Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; PFAM: Guanylate kinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
YP_003654519.1	COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR018357:IPR017694:IPR011004:IPR001451; KEGG: dba:Dbac_0821 phosphonate metabolim protein, transferase hexapeptide repeat family; SPTR: B9QUX9 Phosphonate metabolim protein, transferase hexapeptide repeat family; TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family
YP_003654520.1	COGs: COG3454 Metal-dependent hydrolase involved in phosphonate metabolism; InterPro IPR011059:IPR006680; KEGG: tcx:Tcr_2088 amidohydrolase-like; PFAM: amidohydrolase; SPTR: Q31DU6 Phosphonate metabolism protein; PFAM: Amidohydrolase family; TIGRFAM: phosphonate metabolism protein PhnM
YP_003654521.1	COGs: COG4778 ABC-type phosphonate transport system ATPase component; InterPro IPR003439:IPR017871:IPR012701:IPR003593; KEGG: pin:Ping_3687 ABC phosphonate transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6GN51 ABC transporter related protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL
YP_003654522.1	COGs: COG4107 ABC-type phosphonate transport system ATPase component; InterProIPR003439:IPR017871:IPR012700:IPR003593:IPR 013563; KEGG: cdl:CDR20291_3369 phosphonate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Q181D3 Phosphonate ABC transporter, ATP-binding protein; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK
YP_003654523.1	COGs: COG3627 Uncharacterized protein of phosphonate metabolism; InterPro IPR010306; KEGG: cdl:CDR20291_3370 putative phosphonate metabolism protein; PFAM: phosphonate metabolism PhnJ; SPTR: Q181D5 Putative phosphonate metabolism protein; PFAM: Phosphonate metabolism protein PhnJ
YP_003654524.1	COGs: COG3626 Uncharacterized protein of phosphonate metabolism; InterPro IPR008773; KEGG: tcx:Tcr_2084 phosphonate metabolism; PFAM: phosphonate metabolism; SPTR: Q31DV0 Phosphonate metabolism protein; PFAM: Bacterial phosphonate metabolism protein (PhnI)
YP_003654525.1	COGs: COG3625 Uncharacterized protein of phosphonate metabolism; KEGG: cdf:CD3537 putative phosphonate metabolism protein; SPTR: Q181D8 Putative phosphonate metabolism protein; PFAM: Bacterial phosphonate metabolism protein (PhnH); TIGRFAM: phosphonate C-P lyase system protein PhnH
YP_003654526.1	KEGG: cdl:CDR20291_3373 putative phosphonate metabolism protein; SPTR: Q181D7 Putative phosphonate metabolism protein; PFAM: Phosphonate metabolism protein PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG
YP_003654527.1	COGs: COG3639 ABC-type phosphate/phosphonate transport system permease component; InterPro IPR000515:IPR005769; KEGG: dde:Dde_3326 phosphonate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q30W26 Phosphonate uptake transporter; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE
YP_003654528.1	COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR006311:IPR005770:IPR017797; KEGG: dde:Dde_3325 phosphonate-binding periplasmic protein; SPTR: Q30W27 Phosphonate-binding periplasmic protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; PFAM: NMT1/THI5 like; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein; Tat (twin-arginine translocation) pathway signal sequence
YP_003654529.1	COGs: COG3638 ABC-type phosphate/phosphonate transport system ATPase component; InterPro IPR003439:IPR012693:IPR017871:IPR003593; KEGG: lba:Lebu_0264 phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7NDM2 Phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein
YP_003654530.1	COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: cpf:CPF_2963 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: B1RSY9 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003654531.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR001789:IPR000014:IPR000700:IPR 004358:IPR003594:IPR011006:IPR009082:IPR008207:IPR001610:I PR003661:IPR013767:IPR013656; KEGG: shl:Shal_0720 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; SPTR: B0TSX0 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003654532.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: abu:Abu_1118 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BKU8 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654533.1	COGs: COG3338 Carbonic anhydrase; InterPro IPR001148:IPR018338; KEGG: tdn:Suden_1236 carbonate dehydratase; PFAM: carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: B4W0E2 Eukaryotic-type carbonic anhydrase, putative; PFAM: Eukaryotic-type carbonic anhydrase
YP_003654534.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_0789 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESY0 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003654535.1	COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005771:IPR005835; KEGG: abu:Abu_0839 UTP--glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: A8ET30 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase
YP_003654536.1	COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672; KEGG: tdn:Suden_1472 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: B6BKK2 Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase
YP_003654537.1	COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014021:IPR001650:IPR014001:IPR006935; KEGG: abu:Abu_0181 DNA/RNA helicase; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ER84 DNA/RNA helicase (DEAD/DEAH BOX family); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427)
YP_003654538.1	COGs: COG1858 Cytochrome c peroxidase; InterPro IPR009056:IPR011031:IPR004852; KEGG: abu:Abu_1742 diheme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: A8EVL6 Diheme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase
YP_003654539.1	COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: abu:Abu_1743 sterol desaturase-related protein; PFAM: fatty acid hydroxylase; SPTR: A8EVL7 Sterol desaturase-related protein; PFAM: Fatty acid hydroxylase superfamily
YP_003654540.1	KEGG: abu:Abu_1744 hypothetical protein; SPTR: A8EVL8 Putative uncharacterized protein; PFAM: Imelysin
YP_003654541.1	COGs: COG3488 thiol oxidoreductase; InterPro IPR009056:IPR010538; KEGG: abu:Abu_1745 hypothetical protein; PFAM: protein of unknown function DUF1111; SPTR: A8EVL9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1111)
YP_003654542.1	COGs: COG3487 Uncharacterized iron-regulated protein; InterPro IPR018976; KEGG: abu:Abu_1746 hypothetical protein; PFAM: Peptidase M75, Imelysin; SPTR: A8EVM0 Putative uncharacterized protein; PFAM: Imelysin
YP_003654543.1	KEGG: si:dkey-274c14.3; SPTR: Q5EG54 Vitellogenin
YP_003654544.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0706 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: A8ESP7 Conserved hypothetical membrane protein; PFAM: Outer membrane efflux protein
YP_003654545.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: abu:Abu_0707 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: A8ESP8 HlyD family secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_003654546.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: abu:Abu_0708 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ESP9 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003654547.1	COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR000630:IPR003838; KEGG: abu:Abu_0709 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: A8ESQ0 ABC transporter, permease protein; PFAM: Predicted permease
YP_003654548.1	COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: abu:Abu_0730 sulfite reductase, flavoprotein component; PFAM: PepSY-associated TM helix domain protein; SPTR: A8ESS1 Sulfite reductase, flavoprotein component; PFAM: PepSY-associated TM helix
YP_003654549.1	COGs: COG0415 Deoxyribodipyrimidine photolyase; InterProIPR018394:IPR002081:IPR005101:IPR006050:IPR 014729; KEGG: abu:Abu_0834 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: A8ET25 Deoxyribodipyrimidine photolyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase
YP_003654550.1	COGs: COG1233 Phytoene dehydrogenase and related protein; KEGG: abu:Abu_0833 carotenoid isomerase, putative; SPTR: A8ET24 Carotenoid isomerase, putative; PFAM: Flavin containing amine oxidoreductase
YP_003654551.1	COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: abu:Abu_0832 two-component sensor histidine kinase; PFAM: histidine kinase internal region; SPTR: A8ET23 Two-component sensor histidine kinase; PFAM: Histidine kinase
YP_003654552.1	COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492:IPR011006; KEGG: abu:Abu_0831 two-component response regulator; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; SPTR: A8ET22 Two-component response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_003654553.1	COGs: COG0386 Glutathione peroxidase; InterPro IPR000889:IPR012336:IPR012335; KEGG: hch:HCH_02304 glutathione peroxidase; PFAM: glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: C2A1D5 Glutathione peroxidase; PFAM: Glutathione peroxidase
YP_003654554.1	COGs: COG4276 conserved hypothetical protein; KEGG: chu:CHU_1334 hypothetical protein; SPTR: B5JNV4 Putative uncharacterized protein
YP_003654555.1	COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: tdn:Suden_0918 ferrochelatase; PFAM: ferrochelatase; PRIAM: Ferrochelatase; SPTR: Q30S35 Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_003654556.1	COGs: COG0661 unusual protein kinase; InterPro IPR000719:IPR011009:IPR004147; KEGG: tdn:Suden_0932 hypothetical protein; PFAM: ABC-1 domain protein; SPTR: Q30S21 ABC-1; PFAM: ABC1 family
YP_003654557.1	KEGG: abu:Abu_0829 hypothetical protein; SPTR: A8ET20 Putative uncharacterized protein
YP_003654558.1	COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: abu:Abu_1756 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: A8EVM9 Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_003654559.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013163; KEGG: abu:Abu_1307 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EUE0 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003654560.1	COGs: COG2138 conserved hypothetical protein; InterPro IPR002762; KEGG: abu:Abu_1192 hypothetical protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; SPTR: C0N2C2 Sirohydrochlorin cobaltochelatase; PFAM: CbiX
YP_003654561.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: tdn:Suden_0968 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B6BNX1 Response regulator receiver protein; PFAM: Response regulator receiver domain
YP_003654562.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR000014:IPR000700:IPR004358:IPR 003594:IPR009082:IPR001610:IPR003661:IPR013655; KEGG: tdn:Suden_0966 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: B6BLE0 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); PAS fold; TIGRFAM: PAS domain S-box
YP_003654563.1	KEGG: sun:SUN_1324 hypothetical protein; SPTR: B6BN48 Putative uncharacterized protein; PFAM: Leucyl/phenylalanyl-tRNA protein transferase
YP_003654564.1	COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR001029; KEGG: abu:Abu_2254 flagellin; PFAM: flagellin domain protein; SPTR: A8BSL7 Flagellin A; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_003654565.1	COGs: COG0585 conserved hypothetical protein; InterPro IPR011760:IPR020119:IPR020103:IPR001656; KEGG: abu:Abu_2117 tRNA pseudouridine synthase; PFAM: tRNA pseudouridine synthase D TruD; SPTR: A8EWK8 tRNA pseudouridine synthase; PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: conserved hypothetical protein TIGR00094
YP_003654566.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR000014:IPR004358:IPR003594:IPR 009082:IPR003661; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EVB1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003654567.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: hba:Hbal_2780 nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C6XQF4 Nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit
YP_003654568.1	COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR006066:IPR012744:IPR013027:IPR017121:IPR 005117:IPR007419:IPR006067; KEGG: hna:Hneap_1114 nitrite reductase (NAD(P)H), large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; SPTR: C0N4M3 Nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit
YP_003654569.1	COGs: COG0631 Serine/threonine protein phosphatase; InterProIPR000719:IPR008266:IPR011009:IPR001932:IPR 020635:IPR002290:IPR014045:IPR017442; KEGG: dar:Daro_0820 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Protein phosphatase 2C-like; SMART: serine/threonine protein kinase; protein phosphatase 2C domain protein; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Q47HV5 Serine/threonine protein kinase; PFAM: Protein kinase domain; Protein phosphatase 2C
YP_003654570.1	COGs: COG1513 Cyanate lyase; InterPro IPR008076:IPR003712:IPR010982; KEGG: ttu:TERTU_4160 cyanase; PFAM: Cyanate lyase domain protein; PRIAM: Cyanase; SPTR: A4BAX9 Cyanate lyase; TIGRFAM: cyanate lyase; PFAM: Cyanate lyase C-terminal domain; TIGRFAM: cyanate hydratase
YP_003654571.1	COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: tdn:Suden_0716 formate/nitrite transporter; PFAM: formate/nitrite transporter; SPTR: Q30SN6 Formate/nitrite transporter; PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter
YP_003654572.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR005467:IPR004358:IPR003594; KEGG: abu:Abu_0362 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERR3 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Protein of unknown function (DUF3365)
YP_003654573.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: abu:Abu_0363 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1ZXM7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654574.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR009010:IPR006963:IPR006656:IPR006657; KEGG: dfe:Dfer_2062 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: A6DC81 Nitrate reductase narB; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_003654575.1	COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR015168; KEGG: aeh:Mlg_1703 nitrate transporter; PFAM: NMT1/THI5 like domain protein; SPTR: B6BK92 Nitrate transporter; PFAM: NMT1/THI5 like
YP_003654576.1	COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515:IPR005889; KEGG: aeh:Mlg_1704 nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B6BK94 Nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein
YP_003654577.1	COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR017871:IPR005890:IPR003593; KEGG: vha:VIBHAR_05590 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B6BK95 Nitrate transporter system, ATPase component; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D
YP_003654578.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_1984 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8EW83 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003654579.1	InterPro IPR011044; KEGG: abu:Abu_2118 hypothetical protein; SPTR: A8EWK9 Putative uncharacterized protein
YP_003654580.1	KEGG: abu:Abu_2119 hypothetical protein; SPTR: A8EWL0 Putative uncharacterized protein
YP_003654581.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR004447:IPR005151; KEGG: abu:Abu_2120 carboxyl-terminal protease family protein; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: A8EWL1 Carboxyl-terminal protease family protein; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_003654582.1	COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR001636:IPR013816; KEGG: abu:Abu_2121 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; SPTR: A8EWL2 Phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_003654583.1	COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component; InterPro IPR003850; KEGG: abu:Abu_2122 phosphoribosylformylglycinamidine synthetase; PFAM: phosphoribosylformylglycinamidine synthetase PurS; SPTR: A8EWL3 Phosphoribosylformylglycinamidine synthetase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein
YP_003654584.1	COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR017926:IPR010075:IPR011698; KEGG: abu:Abu_2123 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: A8EWL4 Phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I
YP_003654585.1	KEGG: abu:Abu_2124 hypothetical protein; SPTR: A8EWL5 Putative uncharacterized protein
YP_003654586.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: abu:Abu_2125 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: A8EWL6 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003654587.1	COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: abu:Abu_2126 camphor resistance CrcB protein; PFAM: Camphor resistance CrcB protein; SPTR: A8EWL7 Protein crcB homolog; PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_003654588.1	InterPro IPR006312:IPR003369; KEGG: abu:Abu_2128 twin arginine-targeting protein translocase; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: A8EWL9 Twin-arginine translocation protein, TatA/E family; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_003654589.1	COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR001412:IPR001278:IPR015945:IPR009080:IPR 005148:IPR008909:IPR014729; KEGG: abu:Abu_2129 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: A8EWM0 Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_003654591.1	COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: abu:Abu_2130 hypothetical protein; PFAM: Iojap-related protein; SPTR: A8EWM1 Putative uncharacterized protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein
YP_003654592.1	COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR004821:IPR005248:IPR004820:IPR014729; KEGG: abu:Abu_2131 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: A8EWM2 Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_003654593.1	COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020830:IPR006424:IPR020832:IPR020831:IPR 016040:IPR020828:IPR020829; KEGG: tdn:Suden_1754 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: B6BIF6 Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_003654594.1	COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576:IPR015824:IPR015901; KEGG: abu:Abu_2133 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: A8EWM4 Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_003654595.1	COGs: COG0149 Triosephosphate isomerase; InterPro IPR020861:IPR000652:IPR013785; KEGG: abu:Abu_2134 triosephosphate isomerase; PFAM: triosephosphate isomerase; SPTR: A8EWM5 Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_003654596.1	COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002347:IPR016040:IPR002198; KEGG: abu:Abu_2135 enoyl-(acyl carrier protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8EWM6 Enoyl-(Acyl carrier protein) reductase; PFAM: short chain dehydrogenase
YP_003654597.1	COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183:IPR002986:IPR009006; KEGG: abu:Abu_2136 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: A8EWM7 Diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_003654598.1	COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR006357; KEGG: nam:NAMH_1104 HAD-superfamily hydrolase, subfamily IIA; SPTR: C1ZYC3 Predicted sugar phosphatase of HAD superfamily; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA
YP_003654599.1	COGs: COG0077 Prephenate dehydratase; InterProIPR002701:IPR001086:IPR010957:IPR008242:IPR 020822:IPR002912; KEGG: abu:Abu_2137 bifunctional chorismate mutase/prephenate dehydratase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein; SPTR: A8EWM8 Bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; monofunctional chorismate mutase, gram positive-type, clade 2
YP_003654600.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR001917:IPR005861:IPR015424:IPR004839:IPR 015421; KEGG: abu:Abu_2138 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A8EWM9 Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_003654601.1	COGs: COG1154 Deoxyxylulose-5-phosphate synthase; InterProIPR005474:IPR020826:IPR005477:IPR009014:IPR 005475:IPR005476:IPR015941; KEGG: abu:Abu_2139 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; SPTR: A8EWN0 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Dehydrogenase E1 component; Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_003654602.1	SPTR: C1I4U2 Glycosyl transferase
YP_003654603.1	COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: abu:Abu_2141 Maf-like protein; PFAM: Maf family protein; SPTR: A8EWN2 Septum formation protein Maf homolog; PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_003654604.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR005829:IPR004812:IPR016196:IPR011701; KEGG: abu:Abu_2157 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1ZYY1 Drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein
YP_003654605.1	InterPro IPR000620; KEGG: ppd:Ppro_1999 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A1AQI7 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_003654606.1	KEGG: abu:Abu_2143 hypothetical protein; SPTR: A8EWN4 Putative uncharacterized protein
YP_003654607.1	COGs: COG0679 permease; InterPro IPR000215:IPR004776; KEGG: cps:CPS_0767 auxin efflux carrier family protein; PFAM: Auxin Efflux Carrier; SPTR: Q488J8 Auxin efflux carrier family protein; PFAM: Membrane transport protein
YP_003654608.1	COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: vsa:VSAL_I1387 putative lipoprotein; PFAM: NLP/P60 protein; SPTR: B6EKI6 Putative lipoprotein; PFAM: NlpC/P60 family
YP_003654609.1	KEGG: sun:SUN_0347 hypothetical protein; SPTR: A6Q748 Putative uncharacterized protein
YP_003654610.1	COGs: COG0013 Alanyl-tRNA synthetase; InterProIPR018165:IPR002318:IPR018164:IPR018162:IPR 018163:IPR012947:IPR003156; KEGG: abu:Abu_2092 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; PRIAM: Alanine--tRNA ligase; SPTR: A8EWI6 Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanyl-tRNA synthetase
YP_003654611.1	COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR017936:IPR017937:IPR005746:IPR006662:IPR 012336:IPR013766:IPR012335; KEGG: abu:Abu_2091 thioredoxin; PFAM: Thioredoxin domain; SPTR: A8EWI5 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_003654612.1	COGs: COG0492 Thioredoxin reductase; InterProIPR008255:IPR005982:IPR000103:IPR013027:IPR 016040; KEGG: abu:Abu_2090 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8EWI4 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_003654613.1	COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: dsa:Desal_0910 anion transporter; PFAM: sodium/sulphate symporter; SPTR: C6BZR8 Anion transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_003654614.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR000014:IPR004358:IPR003594:IPR 013767; KEGG: wsu:WS0658 two component sensor kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: Q7M9U6 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: ABC transporter substrate binding protein; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box
YP_003654615.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: wsu:WS0657 two component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C2A0S1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654616.1	COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646:IPR004647:IPR011167; KEGG: abu:Abu_1928 fumarate hydratase, class I; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: A8EW27 Fumarate hydratase, class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
YP_003654617.1	COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041:IPR017896:IPR006058:IPR017900:IPR 004489:IPR009051:IPR012675:IPR012285; KEGG: hhe:HH0687 fumarate reductase iron-sulfur subunit; PFAM: ferredoxin; SPTR: Q7VIC0 Fumarate reductase; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_003654618.1	COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR003952:IPR014006:IPR015939:IPR003953:IPR 004112; KEGG: cff:CFF8240_0415 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase; SPTR: A0RN34 Fumarate reductase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_003654619.1	InterPro IPR004224:IPR018956; KEGG: wsu:WS0832 fumarate reductase cytochrome b-556 subunit; PFAM: Fumarate reductase respiratory complex; SPTR: P17413 Fumarate reductase cytochrome b subunit; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit
YP_003654620.1	COGs: COG0492 Thioredoxin reductase; InterProIPR008255:IPR005982:IPR000103:IPR013027:IPR 016040; KEGG: abu:Abu_2090 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8EWI4 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_003654621.1	COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR000846:IPR011770:IPR016040; KEGG: abu:Abu_2089 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: A8EWI3 Dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_003654622.1	COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR017932:IPR005854:IPR000583:IPR000836; KEGG: abu:Abu_2088 amidophosphoribosyltransferase; PFAM: phosphoribosyltransferase; glutamine amidotransferase class-II; SPTR: A8EWI2 Amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_003654623.1	COGs: COG1242 Fe-S oxidoreductase; InterPro IPR005911:IPR006638:IPR007197; KEGG: abu:Abu_2087 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EWI1 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family
YP_003654624.1	COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: abu:Abu_2086 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A8EWI0 Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003654625.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: abu:Abu_2085 ATP-dependent DNA helicase UvrD; PFAM: UvrD/REP helicase; SPTR: A8EWH9 ATP-dependent DNA helicase, UvrD/PcrA family; PFAM: UvrD/REP helicase
YP_003654626.1	COGs: COG0130 Pseudouridine synthase; InterPro IPR000253:IPR014780:IPR020103:IPR002501; KEGG: abu:Abu_2084 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: A8EWH8 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_003654627.1	COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterPro IPR004424:IPR020568:IPR006204:IPR014721; KEGG: abu:Abu_2083 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; PRIAM: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; SPTR: A8EWH7 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_003654628.1	COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: abu:Abu_2082 tmRNA-binding protein SmpB; PFAM: SmpB protein; SPTR: A8EWH6 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_003654629.1	COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR004677; KEGG: abu:Abu_2081 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: A8EWH5 Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I
YP_003654630.1	COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR009056:IPR003468; KEGG: abu:Abu_2080 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: A8EWH4 Cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II
YP_003654631.1	InterPro IPR014107; KEGG: abu:Abu_2079 cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cytochrome c oxidase cbb3-type CcoQ; SPTR: A8EWH3 Cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cbb3-type cytochrome oxidase component FixQ; TIGRFAM: cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial
YP_003654632.1	InterPro IPR009056:IPR008168:IPR004678:IPR003088; KEGG: abu:Abu_2078 cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; SPTR: A8EWH2 Cytochrome c oxidase, cbb3-type, subunit III; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III
YP_003654633.1	KEGG: abu:Abu_2077 hypothetical protein; SPTR: A8EWH1 Putative uncharacterized protein
YP_003654634.1	KEGG: abu:Abu_2076 hypothetical protein; SPTR: A8EWH0 Putative uncharacterized protein
YP_003654635.1	KEGG: abu:Abu_2075 hypothetical protein; SPTR: A8EWG9 Putative uncharacterized protein
YP_003654636.1	KEGG: abu:Abu_2074 hypothetical protein; SPTR: A8EWG8 Putative uncharacterized protein; PFAM: FixH
YP_003654637.1	COGs: COG3893 Inactivated superfamily I helicase; InterPro IPR011604; KEGG: abu:Abu_2073 hypothetical protein; SPTR: A8EWG7 Putative uncharacterized protein
YP_003654638.1	COGs: COG1186 Protein chain release factor B; InterPro IPR000352:IPR004374:IPR005139; KEGG: abu:Abu_2071 peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: A8EWG5 Peptide chain release factor 2; TIGRFAM: peptide chain release factor 2; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2
YP_003654639.1	InterPro IPR009056; KEGG: abu:Abu_2070 hypothetical protein; SPTR: A8EWG4 Putative uncharacterized protein
YP_003654640.1	InterPro IPR008439:IPR005318; KEGG: abu:Abu_2032 major outer membrane protein; PFAM: major outer membrane protein; outer membrane porin; SPTR: A8EWC6 Major outer membrane protein; PFAM: Campylobacter major outer membrane protein
YP_003654641.1	COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157; KEGG: abu:Abu_2033 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; SPTR: A8EWC7 Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_003654642.1	COGs: COG0344 membrane protein; InterPro IPR020788:IPR003811; KEGG: abu:Abu_2034 putative glycerol-3-phosphate acyltransferase PlsY; PFAM: protein of unknown function DUF205; SPTR: A8EWC8 UPF0078 membrane protein Abu_2034; PFAM: Domain of unknown function (DUF205); TIGRFAM: conserved hypothetical integral membrane protein TIGR00023
YP_003654643.1	COGs: COG0379 Quinolinate synthase; InterPro IPR003473; KEGG: abu:Abu_2035 quinolinate synthetase; PFAM: Quinolinate synthetase A; SPTR: A8EWC9 Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_003654644.1	COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR004393:IPR002638:IPR013785; KEGG: abu:Abu_2036 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: A8EWD0 Nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_003654645.1	COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: abu:Abu_2037 exopolyphosphatase-related protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: A8EWD1 Exopolyphosphatase-related protein; PFAM: DHH family; DHHA1 domain
YP_003654646.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR016047; KEGG: abu:Abu_2038 M24/M37 family peptidase; PFAM: Peptidase M23; SPTR: A8EWD2 Peptidase, M23/M37 family; PFAM: Peptidase family M23
YP_003654647.1	COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; InterPro IPR004463:IPR020568:IPR015870:IPR011334; KEGG: abu:Abu_2039 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; SPTR: A8EWD3 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase
YP_003654648.1	KEGG: abu:Abu_2040 hypothetical protein; SPTR: A8EWD4 Putative uncharacterized protein
YP_003654649.1	COGs: COG0083 Homoserine kinase; InterProIPR006203:IPR000870:IPR020568:IPR006204:IPR 013750:IPR014721; KEGG: abu:Abu_2041 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: Homoserine kinase; SPTR: A8EWD5 Homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase
YP_003654650.1	InterPro IPR007393; KEGG: abu:Abu_2042 hypothetical protein; PFAM: protein of unknown function DUF448; SPTR: A8EWD6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF448)
YP_003654651.1	COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178:IPR005225:IPR009000:IPR009061:IPR 006847:IPR000795:IPR004161; KEGG: abu:Abu_2043 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; SPTR: A8EWD7 Translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_003654652.1	COGs: COG0858 Ribosome-binding factor A; InterPro IPR020053:IPR000238:IPR015946; KEGG: abu:Abu_2044 ribosome-binding factor A; SPTR: A8EWD8 Ribosome binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_003654653.1	InterPro IPR003728; KEGG: abu:Abu_2045 hypothetical protein; PFAM: protein of unknown function DUF150; SPTR: A8EWD9 Ribosome maturation factor rimP; PFAM: Uncharacterised BCR, YhbC family COG0779
YP_003654654.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: vsp:VS_II0834 putative threonine efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q2BLH5 Putative threonine efflux protein-like; PFAM: LysE type translocator
YP_003654655.1	COGs: COG0117 Pyrimidine deaminase; InterPro IPR004794:IPR016193:IPR002125:IPR002734; KEGG: abu:Abu_2046 bifunctional riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase; SPTR: A8EWE0 Bifunctional riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin biosynthesis protein RibD
YP_003654656.1	KEGG: hypothetical protein; SPTR: A0DH50 Chromosome undetermined scaffold_50, whole genome shotgun sequence
YP_003654657.1	COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR011768:IPR020599:IPR008991:IPR016027:IPR 013185:IPR001059:IPR015365:IPR014722:IPR012340; KEGG: abu:Abu_2047 elongation factor P; PFAM: Elongation factor KOW domain protein; Elongation factor P/YeiP protein; Elongation factor P; SPTR: A8EWE1 Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_003654658.1	COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterProIPR006140:IPR006236:IPR016040:IPR006139:IPR 002912; KEGG: abu:Abu_2048 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; SPTR: A8EWE2 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase
YP_003654659.1	COGs: COG0539 Ribosomal protein S1; InterPro IPR003029:IPR000110:IPR016027:IPR012340; KEGG: abu:Abu_2049 30S ribosomal protein S1; PFAM: RNA binding S1 domain protein; SPTR: A8EWE3 30S ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_003654660.1	COGs: COG0761 Penicillin tolerance protein; InterPro IPR003451; KEGG: abu:Abu_2050 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: A8EWE4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_003654661.1	COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR001986:IPR006264:IPR016228:IPR013792; KEGG: abu:Abu_2051 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: A8EWE5 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_003654662.1	COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR002547:IPR005121:IPR004532:IPR016027:IPR 009061:IPR005147:IPR012340; KEGG: abu:Abu_2052 phenylalanyl-tRNA synthetase subunit beta; PFAM: ferredoxin-fold anticodon-binding; t-RNA-binding domain protein; tRNA synthetase B5; SPTR: A8EWE6 Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_003654663.1	COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterProIPR006195:IPR004529:IPR010978:IPR004188:IPR 002319; KEGG: abu:Abu_2053 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; PRIAM: Phenylalanine--tRNA ligase; SPTR: A8EWE7 Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_003654664.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR019808:IPR011146:IPR011151; KEGG: abu:Abu_2054 HIT family protein; PFAM: histidine triad (HIT) protein; SPTR: A8EWE8 HIT family protein; PFAM: HIT domain
YP_003654665.1	COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; InterPro IPR011763:IPR001095:IPR020582; KEGG: abu:Abu_2055 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; PRIAM: Acetyl-CoA carboxylase; SPTR: A8EWE9 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
YP_003654666.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterProIPR017568:IPR016039:IPR014030:IPR014031:IPR 016038; KEGG: abu:Abu_2056 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase; SPTR: A8EWF0 Beta ketoacyl-(Acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2
YP_003654667.1	InterPro IPR009081:IPR006162:IPR003231:IPR006163; KEGG: abu:Abu_2057 acyl carrier protein, putative; PFAM: phosphopantetheine-binding; SPTR: A8EWF1 Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_003654668.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR011284:IPR002347:IPR016040; KEGG: abu:Abu_2058 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8EWF2 3-oxoacyl-(Acyl carrier protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_003654669.1	COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: abu:Abu_2059 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A8EWF3 Radical SAM domain protein; PFAM: Radical SAM superfamily
YP_003654670.1	KEGG: abu:Abu_2060 hypothetical protein; SPTR: C1ZZD3 Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase
YP_003654671.1	COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR004479:IPR018317; KEGG: abu:Abu_2061 ExsB family transcriptional regulator; PFAM: Queuosine synthesis-like; SPTR: A8EWF5 Queuosine biosynthesis protein queC; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein
YP_003654672.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: tdn:Suden_1912 molybdopterin binding domain-containing protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: B6BHS7 Molybdopterin binding domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_003654673.1	KEGG: abu:Abu_2062 hypothetical protein; SPTR: A8EWF6 Putative uncharacterized protein
YP_003654674.1	COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: abu:Abu_2063 16S ribosomal RNA methyltransferase RsmE; PFAM: protein of unknown function DUF558; SPTR: A8EWF7 Putative uncharacterized protein; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_003654675.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1736 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EVL0 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654676.1	KEGG: wsu:WS0750 hypothetical protein; SPTR: C1ZXD2 Putative uncharacterized protein
YP_003654677.1	InterPro IPR009056:IPR003088; KEGG: wsu:WS0749 hypothetical protein; PFAM: cytochrome c class I; SPTR: C1ZXD1 Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Cytochrome c
YP_003654678.1	COGs: COG2857 Cytochrome c1; InterPro IPR009056:IPR013838; KEGG: abu:Abu_2064 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; SPTR: A8EWF8 Ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; PFAM: Cytochrome c; Cytochrome C1 family
YP_003654679.1	COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797:IPR005798:IPR016174:IPR016175; KEGG: abu:Abu_2065 ubiquinol cytochrome c oxidoreductase, cytochrome b subunit; PFAM: Cytochrome b/b6 domain; SPTR: A8EWF9 Cytochrome b; PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD
YP_003654680.1	COGs: COG0723 Rieske Fe-S protein; InterProIPR017941:IPR017909:IPR006311:IPR006317:IPR 005805; KEGG: abu:Abu_2066 ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: A8EWG0 Ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; Tat (twin-arginine translocation) pathway signal sequence
YP_003654681.1	COGs: COG0498 Threonine synthase; InterPro IPR000634:IPR004450:IPR001926; KEGG: abu:Abu_2067 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: A8EWG1 Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_003654682.1	COGs: COG0548 Acetylglutamate kinase; InterPro IPR004662:IPR011148:IPR001048; KEGG: abu:Abu_2068 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: A8EWG2 Acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_003654683.1	COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212; KEGG: abu:Abu_2069 putative recombination protein RecB; PFAM: UvrD/REP helicase; SPTR: A8EWG3 ATP-dependent DNA helicase, UvrD/REP family; PFAM: UvrD/REP helicase
YP_003654684.1	COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733:IPR013785; KEGG: abu:Abu_2031 thiamine monophosphate synthase; PFAM: thiamine monophosphate synthase; SPTR: A8EWC5 Thiamine monophosphate synthase; PFAM: Thiamine monophosphate synthase/TENI
YP_003654685.1	COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: abu:Abu_2030 F0F1 ATP synthase subunit A; PFAM: H+transporting two-sector ATPase A subunit; SPTR: A8EWC4 ATP synthase subunit a; TIGRFAM: ATP synthase F0, A subunit; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_003654686.1	COGs: COG1171 Threonine dehydratase; InterPro IPR000634:IPR005789:IPR001926; KEGG: abu:Abu_2029 threonine deaminase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8EWC3 Threonine deaminase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form
YP_003654687.1	COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR006276:IPR013215:IPR002629; KEGG: tdn:Suden_0899 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; SPTR: Q30S54 Methionine synthase (B12-independent); TIGRFAM:5-methyltetrahydropteroyltriglutamate/homoc ysteineS-methyltransferase; PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_003654688.1	KEGG: abu:Abu_2027 hypothetical protein; SPTR: A8EWC1 Putative uncharacterized protein
YP_003654689.1	COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649:IPR016009; KEGG: abu:Abu_2026 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: A8EWC0 tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_003654690.1	COGs: COG0335 Ribosomal protein L19; InterPro IPR001857; KEGG: abu:Abu_2025 50S ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: A8EWB9 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_003654691.1	KEGG: cha:CHAB381_0073 hypothetical protein; SPTR: C2A0R0 Putative uncharacterized protein; PFAM: Phosphorylase superfamily
YP_003654692.1	COGs: COG1533 DNA repair photolyase; KEGG: cha:CHAB381_0074 hypothetical protein; SPTR: B6BLV9 Putative uncharacterized protein
YP_003654693.1	COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: pmx:PERMA_0980 patatin; PFAM: Patatin; SPTR: A3HRX0 Putative uncharacterized protein; PFAM: Patatin-like phospholipase
YP_003654694.1	COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: sun:SUN_1062 Mn2+/Zn2+ ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6Q960 Mn2+/Zn2+ ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003654695.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: sun:SUN_1061 Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC-3 protein; SPTR: A6Q959 Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC 3 transport family
YP_003654696.1	COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: abu:Abu_2024 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: A8EWB8 Conserved hypothetical integral membrane protein; PFAM: SNARE associated Golgi protein
YP_003654697.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002347:IPR002198:IPR016040; KEGG: cha:CHAB381_0075 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C2A0R5 Putative uncharacterized protein; PFAM: short chain dehydrogenase
YP_003654698.1	COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR000644:IPR006669:IPR006668:IPR006667; KEGG: sun:SUN_0711 magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SPTR: B6BJY9 Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE)
YP_003654699.1	COGs: COG3610 conserved hypothetical protein; InterPro IPR010619; KEGG: abu:Abu_0318 hypothetical protein; PFAM: protein of unknown function DUF1212; SPTR: A8ERL9 Conserved hypothetical membrane protein (DUF1212 domain protein); PFAM: Protein of unknown function (DUF1212)
YP_003654700.1	COGs: COG2966 conserved hypothetical protein; InterPro IPR010619; KEGG: abu:Abu_0319 hypothetical protein; PFAM: protein of unknown function DUF1212; SPTR: A8ERM0 Conserved hypothetical membrane protein (DUF1212 domain protein); PFAM: Protein of unknown function (DUF1212)
YP_003654701.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057:IPR000005; KEGG: abu:Abu_0341 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8ERP2 Transcriptional regulator, AraC family
YP_003654702.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010105:IPR012910:IPR000531; KEGG: abu:Abu_0340 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8ERP1 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_003654703.1	COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: abu:Abu_0344 cation efflux system, membrane protein; PFAM: cation efflux protein; SPTR: A8ERP5 Cation efflux system, membrane protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003654704.1	InterPro IPR003735; KEGG: abu:Abu_0343 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: A8ERP4 Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937
YP_003654705.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057:IPR000005; KEGG: abu:Abu_0341 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8ERP2 Transcriptional regulator, AraC family
YP_003654706.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: abu:Abu_0340 TonB-dependent receptor protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: A8ERP1 TonB-dependent receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_003654707.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR017871:IPR011527:IPR 003593:IPR001140; KEGG: abu:Abu_0339 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A8ERP0 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter transmembrane region; ABC transporter
YP_003654708.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR017871:IPR011527:IPR 003593:IPR001140; KEGG: wsu:WS1265 ABC transporter ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: C2A117 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter
YP_003654709.1	InterPro IPR016196:IPR011701; KEGG: wsu:WS1266 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Q7MRK1 Putative uncharacterized protein; PFAM: Major Facilitator Superfamily
YP_003654710.1	InterPro IPR001958:IPR016196:IPR011701; KEGG: abu:Abu_0336 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ERN7 Major facilitator superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003654711.1	COGs: COG1971 membrane protein; InterPro IPR018062:IPR003810; KEGG: abu:Abu_0335 hypothetical protein; PFAM: protein of unknown function DUF204; SPTR: A8ERN6 UPF0059 membrane protein Abu_0335; PFAM: Domain of unknown function DUF
YP_003654712.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638; KEGG: cpr:CPR_2062 glutamine-binding periplasmic protein of glutamine ABC transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Q8XIM2 Probable amino acid ABC transporter; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003654713.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: asa:ASA_4387 ABC-type polar amino acid transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A4STT0 ABC-type polar amino acid transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003654714.1	KEGG: abu:Abu_0320 hypothetical protein; SPTR: A8ERM1 Putative uncharacterized protein
YP_003654715.1	COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: abu:Abu_0321 pantothenate kinase; PFAM: Bvg accessory factor; PRIAM: Pantothenate kinase; SPTR: A8ERM2 Transcriptional activator, putative, Baf family; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_003654716.1	COGs: COG0040 ATP phosphoribosyltransferase; InterPro IPR018198:IPR013820; KEGG: abu:Abu_0322 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: A8ERM3 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase
YP_003654717.1	InterPro IPR013216; KEGG: abu:Abu_0323 putative methyltransferase; PFAM: Methyltransferase type 11; SPTR: A8ERM4 Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_003654718.1	KEGG: abu:Abu_0326 hypothetical protein; SPTR: A8ERM7 Putative uncharacterized protein
YP_003654719.1	COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR001412:IPR002306:IPR002305:IPR014729; KEGG: abu:Abu_0327 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: A8ERM8 Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_003654720.1	COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: dar:Daro_0549 TRAP transporter solute receptor TAXI family protein; SPTR: A7C0T5 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_003654721.1	KEGG: abu:Abu_2012 hypothetical protein; SPTR: A8EWA6 Putative uncharacterized protein
YP_003654722.1	InterPro IPR002355; KEGG: abu:Abu_2011 hypothetical protein; SPTR: A8EWA5 Putative uncharacterized protein
YP_003654723.1	KEGG: abu:Abu_2010 hypothetical protein; SPTR: A8EWA4 Putative uncharacterized protein
YP_003654724.1	COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR010105:IPR012910:IPR000531; KEGG: abu:Abu_2009 ferrichrome-iron receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8EWA3 Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_003654725.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR020449:IPR009057:IPR000005:IPR 012287; KEGG: wsu:WS0288 AraC-type DNA-binding proteins; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Q7MSM8 AraC-type DNA-binding proteins; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003654726.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: abu:Abu_1868 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EVY3 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654727.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR004358:IPR003594:IPR011623; KEGG: abu:Abu_1869 two-component sensor histidine kinase; PFAM: Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EVY4 Sensor protein; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003654728.1	KEGG: abu:Abu_1862 hypothetical protein; SPTR: A8EVX7 Putative uncharacterized protein
YP_003654729.1	KEGG: cha:CHAB381_0440 hypothetical protein; SPTR: C5VQ72 Putative uncharacterized protein
YP_003654730.1	InterPro IPR018208; KEGG: abu:Abu_1855 hypothetical protein; SPTR: A8EVX0 Putative uncharacterized protein
YP_003654731.1	COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225:IPR006073:IPR002917:IPR011619:IPR 011642:IPR011640; KEGG: abu:Abu_1854 ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; nucleoside recognition domain protein; Ferrous iron transport B domain protein; SPTR: C2A0Z8 Putative uncharacterized protein; TIGRFAM: small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain
YP_003654732.1	COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: dds:Ddes_0645 FeoA family protein; PFAM: FeoA family protein; SPTR: B8IYF8 FeoA family protein; PFAM: FeoA domain
YP_003654733.1	InterPro IPR019734:IPR013026; KEGG: vex:VEA_001861 tPR domain protein putative component of TonB system; SMART: Tetratricopeptide repeat; SPTR: A7K0Z5 Tetratricopeptide repeat domain protein
YP_003654734.1	COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260:IPR003538; KEGG: rce:RC1_0803 protein TonB; PFAM: Gram-negative tonB protein; SPTR: B6IRZ8 Protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_003654735.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: noc:Noc_0609 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Q1N4L4 TonB system transport protein ExbD2; PFAM: Biopolymer transport protein ExbD/TolR
YP_003654736.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: shn:Shewana3_2624 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q0HTN8 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family
YP_003654737.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR017270:IPR002898; KEGG: vex:VEA_001857 MotA/TolQ/ExbB proton channel family protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q1VAM3 Putative TolR; PFAM: MotA/TolQ/ExbB proton channel family
YP_003654738.1	InterPro IPR016866; KEGG: aha:AHA_3434 TonB system biopolymer transport component; SPTR: A0KNS2 TonB system biopolymer transport component; PFAM: Protein of unknown function (DUF3450)
YP_003654739.1	COGs: COG3182 Uncharacterized iron-regulated membrane protein; KEGG: abu:Abu_2313 hypothetical protein; SPTR: A8EX48 Putative uncharacterized protein
YP_003654740.1	KEGG: abu:Abu_2010 hypothetical protein; SPTR: A8EWA4 Putative uncharacterized protein
YP_003654741.1	COGs: COG4774 Outer membrane receptor for monomeric catechols; InterPro IPR010105:IPR012910:IPR000531; KEGG: pen:PSEEN3225 TonB-dependent siderophore receptor FpvA; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: C1DGE3 TonB-dependent siderophore receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_003654742.1	COGs: COG0172 Seryl-tRNA synthetase; InterProIPR006195:IPR002317:IPR018156:IPR010978:IPR 015866:IPR002314; KEGG: abu:Abu_0345 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: A8ERP6 Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase
YP_003654743.1	InterPro IPR001387:IPR011051:IPR013096:IPR014710; KEGG: ckr:CKR_1206 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B9E182 Putative uncharacterized protein; PFAM: Cupin domain; Helix-turn-helix
YP_003654744.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027:IPR000103; KEGG: tdn:Suden_1213 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q30R90 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003654745.1	COGs: COG0686 Alanine dehydrogenase; InterProIPR008141:IPR013027:IPR016040:IPR007886:IPR 007698; KEGG: hap:HAPS_1913 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: B0NKM9 Putative uncharacterized protein; TIGRFAM: alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase
YP_003654746.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: vpa:VPA1206 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q87GV9 Putative uncharacterized protein VPA1206; PFAM: LysE type translocator
YP_003654747.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_2291 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EX26 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003654748.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: sfr:Sfri_1305 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A6F7U5 Putative uncharacterized protein; PFAM: LysE type translocator
YP_003654749.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: pin:Ping_2821 ABC transporter for amino acids ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A1SYG2 ABC transporter for amino acids ATP-binding protein; PFAM: ABC transporter
YP_003654750.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: pin:Ping_2820 ABC polar amino acid transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6F8P9 Amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003654751.1	COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515; KEGG: pin:Ping_2823 ABC polar amino acid transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A1SYG0 ABC polar amino acid transporter inner membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003654752.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR005768:IPR001638; KEGG: hch:HCH_05807 amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Q1ZCK8 General L-amino acid-binding protein; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_003654753.1	InterPro IPR005623; KEGG: tdn:Suden_1521 periplasmic nitrate reductase NapD; PFAM: NapD family protein; SPTR: B6BKR2 Periplasmic nitrate reductase NapD; PFAM: NapD protein
YP_003654754.1	InterPro IPR011046:IPR015943; KEGG: abu:Abu_0353 putative periplasmic protein; SPTR: A8ERQ4 Putative periplasmic protein
YP_003654755.1	InterPro IPR017896:IPR017900:IPR001450; KEGG: abu:Abu_0354 ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ERQ5 Ferredoxin-type protein NapF; PFAM: 4Fe-4S binding domain; TIGRFAM: ferredoxin-type protein NapF
YP_003654756.1	COGs: COG3043 Nitrate reductase cytochrome c-type subunit; InterPro IPR005591; KEGG: abu:Abu_0355 periplasmic nitrate reductase, small subunit, cytochrome c-type protein NapB; PFAM: Nitrate reductase cytochrome c-type subunit (NapB); SPTR: A8ERQ6 Periplasmic nitrate reductase, small subunit, cytochrome c-type protein NapB; PFAM: Nitrate reductase cytochrome c-type subunit (NapB)
YP_003654757.1	COGs: COG0348 Polyferredoxin; InterPro IPR017896:IPR017900:IPR011886:IPR001450; KEGG: abu:Abu_0356 quinol dehydrogenase membrane component; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ERQ7 Methylamine utilization ferredoxin-type protein NapH; TIGRFAM: ferredoxin-type protein, NapH/MauN family; TIGRFAM: ferredoxin-type protein, NapH/MauN family
YP_003654758.1	InterPro IPR017896:IPR017900:IPR004494:IPR001450; KEGG: tdn:Suden_1515 quinol dehydrogenase periplasmic component; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B6BKQ8 MauM/NapG ferredoxin-type protein; TIGRFAM: MauM/NapG family ferredoxin-type protein; PFAM: 4Fe-4S binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; MauM/NapG family ferredoxin-type protein
YP_003654759.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR017909:IPR010051:IPR006311:IPR009010:IPR 019546:IPR006963:IPR006656:IPR006657; KEGG: abu:Abu_0358 nitrate reductase catalytic subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; SPTR: A8ERQ9 Periplasmic nitrate reductase, large subunit; TIGRFAM: periplasmic nitrate reductase, large subunit; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: periplasmic nitrate reductase, large subunit; Tat (twin-arginine translocation) pathway signal sequence
YP_003654760.1	COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR000312:IPR017459; KEGG: tdn:Suden_1980 glycosyl transferase family protein; SPTR: B6BHF8 Glycosyl transferase, family 3; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain
YP_003654761.1	COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367:IPR016040; KEGG: nis:NIS_1777 hypothetical protein; PRIAM: Precorrin-2 dehydrogenase; SPTR: A6Q5X3 Putative uncharacterized protein; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain
YP_003654762.1	COGs: COG0007 Uroporphyrinogen-III methylase; InterProIPR003043:IPR006366:IPR000878:IPR014777:IPR 014776; KEGG: abu:Abu_0365 uroporphyrin III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: A8ERR6 Uroporphyrin III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_003654763.1	KEGG: abu:Abu_0366 hypothetical protein; SPTR: A8ERR7 Putative uncharacterized protein
YP_003654764.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR018490:IPR001808:IPR014710; KEGG: abu:Abu_0367 putative transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding; SPTR: B6BKQ5 Cyclic nucleotide-binding domain protein; PFAM: Cyclic nucleotide-binding domain
YP_003654765.1	COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterProIPR000385:IPR013483:IPR006638:IPR007197:IPR 010505:IPR013785; KEGG: abu:Abu_0369 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ERS0 Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_003654766.1	KEGG: ckr:CKR_1031 hypothetical protein; SPTR: B9E0Q7 Putative uncharacterized protein
YP_003654767.1	COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003439:IPR003593; KEGG: abu:Abu_1039 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETM5 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003654768.1	COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589:IPR005290:IPR009068; KEGG: abu:Abu_0370 30S ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: A8ERS1 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_003654769.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: abu:Abu_0371 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: A8ERS2 Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator)
YP_003654770.1	COGs: COG2404 phosphohydrolase (DHH superfamily); InterPro IPR003156; KEGG: abu:Abu_0372 hypothetical protein; PFAM: phosphoesterase DHHA1; SPTR: A8ERS3 Putative uncharacterized protein
YP_003654771.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR000014:IPR000700:IPR011006:IPR 013655; KEGG: wsu:WS1304 diguanylate cyclase (fragment); PFAM: response regulator receiver; PAS fold-3 domain protein; SMART: response regulator receiver; PAS domain containing protein; SPTR: A8V332 DIGUANYLATE CYCLASE; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003654772.1	COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: wsu:WS1277 membrane-bound lytic murein transglycosylase C; PFAM: Lytic transglycosylase catalytic; SPTR: Q7M906 MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE C ,; PFAM: Transglycosylase SLT domain; Domain of unknown function (DUF3393)
YP_003654773.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013163; KEGG: abu:Abu_2291 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EX26 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003654774.1	InterPro IPR001845:IPR011991; KEGG: abu:Abu_1932 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A8EW31 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_003654775.1	COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR000802; KEGG: abu:Abu_1931 arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; SPTR: C2A0X0 Na+/H+ antiporter NhaD-like permease; PFAM: Arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein
YP_003654776.1	COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: abu:Abu_1935 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: A8EW34 Arsenate reductase; PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_003654777.1	COGs: COG0701 permease; InterPro IPR005524; KEGG: sun:SUN_1419 hypothetical protein; PFAM: permease; SPTR: C2A085 Predicted permease; PFAM: Predicted permease
YP_003654778.1	COGs: COG1832 CoA-binding protein; InterPro IPR003781:IPR016040; KEGG: abu:Abu_0373 CoA-binding domain-containing protein; PFAM: CoA-binding domain protein; SPTR: A8ERS4 CoA-binding domain protein
YP_003654779.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR003661:IPR003594:IPR 004358:IPR009082; KEGG: abu:Abu_0374 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ERS5 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003654780.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011991:IPR011006; KEGG: abu:Abu_0375 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ERS6 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654781.1	InterPro IPR000297; KEGG: abu:Abu_0376 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: A8ERS7 Peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain
YP_003654782.1	COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR006411:IPR000771:IPR013785; KEGG: abu:Abu_0377 fructose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; SPTR: A8ERS8 Fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
YP_003654783.1	InterPro IPR002104:IPR013762:IPR011010; KEGG: spl:Spea_1281 integrase family protein; PFAM: integrase family protein; SPTR: C2A3H3 Integrase; PFAM: Phage integrase family
YP_003654784.1	KEGG: bbz:BbuZS7_0563 hypothetical protein; SPTR: C0SXY9 Putative uncharacterized protein
YP_003654785.1	KEGG: sun:SUN_2414 hypothetical protein; SPTR: A6QCZ1 Phage-related protein
YP_003654786.1	KEGG: hypothetical protein; SPTR: A2G850 Putative uncharacterized protein
YP_003654787.1	KEGG: nucleolar protein NOP5; SPTR: B3L3M4 Nucleolar protein NOP5, putative
YP_003654788.1	KEGG: hypothetical protein; SPTR: Q8IIE1 Conserved Plasmodium protein
YP_003654789.1	KEGG: llc:LACR_0075 hypothetical protein; SPTR: Q033C0 Conserved protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family
YP_003654790.1	KEGG: smt:Smal_2121 hypothetical protein; SPTR: B8LAK4 Putative uncharacterized protein
YP_003654791.1	KEGG: hypothetical protein; SPTR: A2EE42 Putative uncharacterized protein
YP_003654792.1	KEGG: hypothetical protein; SPTR: A2G5Q5 Putative uncharacterized protein
YP_003654793.1	KEGG: mbt:JTY_0315 PPE family protein; SPTR: Q7U2B2 PPE FAMILY PROTEIN
YP_003654795.1	KEGG: pin:Ping_2581 hypothetical protein; SPTR: A1SXT7 Putative uncharacterized protein
YP_003654796.1	KEGG: hypothetical protein; SPTR: B4PR57 GE26342
YP_003654797.1	InterPro IPR001000; KEGG: bai:BAA_2636 transcriptional regulator, MerR family; SPTR: Q05352 Immuno-dominant variable surface antigen
YP_003654798.1	KEGG: abu:Abu_1755 hypothetical protein; SPTR: A8EVM8 Putative uncharacterized protein
YP_003654799.1	KEGG: IQ calmodulin-binding motif family protein; SPTR: C5QTE1 Proline dehydrogenase
YP_003654800.1	KEGG: sun:SUN_2420 hypothetical protein; SPTR: A6QCZ7 Putative uncharacterized protein
YP_003654802.1	KEGG: GF19101 gene product from transcript GF19101-RA; SPTR: B3MZM3 GF19101
YP_003654803.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abu:Abu_1046 hypothetical protein; PFAM: helix-turn-helix HxlR type; SPTR: A8ETN2 Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix
YP_003654804.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: wsu:WS0768 acriflavin resistance A precursor; PFAM: secretion protein HlyD family protein; SPTR: Q7M9Q0 ACRIFLAVIN RESISTANCE A; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_003654805.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: wsu:WS0770 multidrug resistance protein MexB; PFAM: acriflavin resistance protein; SPTR: C2A2V6 Hydrophobe/amphiphile efflux-1 (HAE1) family transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_003654806.1	COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: wsu:WS0771 putative outer membrane channel protein; PFAM: outer membrane efflux protein; SPTR: C2A2V7 Efflux transporter, outer membrane factor lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_003654807.1	KEGG: cyh:Cyan8802_2166 hypothetical protein; SPTR: Q4FRA5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3124)
YP_003654808.1	COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000160; KEGG: nis:NIS_1639 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A6Q5I6 Putative uncharacterized protein; PFAM: EAL domain; GGDEF domain
YP_003654809.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400:IPR000871; KEGG: abu:Abu_0380 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ERT1 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR
YP_003654810.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: abu:Abu_0381 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8ERT2 Biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family
YP_003654811.1	COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; InterPro IPR001926; KEGG: abu:Abu_0382 hypothetical protein; SPTR: A8ERT3 Putative uncharacterized protein
YP_003654812.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR015168:IPR001638:IPR 013767:IPR003661:IPR003594:IPR004358:IPR009082; KEGG: abu:Abu_1730 two-component sensor histidine kinase; PFAM: NMT1/THI5 like domain protein; extracellular solute-binding protein family 3; PAS fold domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: B6BKU9 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; NMT1/THI5 like; PAS fold; TIGRFAM: PAS domain S-box
YP_003654813.1	COGs: COG0703 Shikimate kinase; InterPro IPR000623; KEGG: abu:Abu_0383 shikimate kinase; PFAM: shikimate kinase; PRIAM: Shikimate kinase; SPTR: A8ERT4 Shikimate kinase; PFAM: Shikimate kinase
YP_003654814.1	COGs: COG0141 Histidinol dehydrogenase; InterPro IPR012131:IPR016161; KEGG: abu:Abu_0384 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: A8ERT5 Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_003654815.1	InterPro IPR018563; KEGG: abu:Abu_0385 hypothetical protein; PFAM: Domain of unknown function DUF2018; SPTR: A8ERT6 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2018)
YP_003654816.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: abu:Abu_0386 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: A8ERT7 Octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase
YP_003654817.1	COGs: COG0373 Glutamyl-tRNA reductase; InterProIPR000343:IPR015895:IPR006151:IPR015896:IPR 016040:IPR018214; KEGG: abu:Abu_0387 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; PRIAM: Glutamyl-tRNA reductase; SPTR: A8ERT8 Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase
YP_003654818.1	COGs: COG0442 Prolyl-tRNA synthetase; InterProIPR006195:IPR004500:IPR002314:IPR007214:IPR 004154:IPR002316; KEGG: abu:Abu_0388 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; PRIAM: Proline--tRNA ligase; SPTR: A8ERT9 Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II
YP_003654819.1	COGs: COG3264 Small-conductance mechanosensitive channel; InterProIPR006685:IPR011066:IPR010920:IPR011014:IPR 006162; KEGG: abu:Abu_0389 mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: B5JYK0 MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel; Conserved TM helix
YP_003654820.1	COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646; KEGG: sun:SUN_0962 polynucleotide adenylyltransferase/metal-dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; SPTR: A6Q8W0 Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase; PFAM: Poly A polymerase head domain
YP_003654821.1	COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR004563:IPR003010; KEGG: abu:Abu_0393 apolipoprotein N-acyltransferase; SPTR: A8ERU4 Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_003654822.1	COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: abu:Abu_0394 preprotein translocase subunit; PFAM: YajC family protein; SPTR: A8ERU5 Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_003654823.1	COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR005791:IPR003335:IPR001036; KEGG: abu:Abu_0395 protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: A8ERU6 Protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family
YP_003654824.1	COGs: COG0341 Preprotein translocase subunit SecF; InterPro IPR005665:IPR003335; KEGG: nis:NIS_1465 preprotein translocase subunit SecF; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: A6Q513 Preprotein translocase subunit F; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_003654825.1	KEGG: abu:Abu_1561 hypothetical protein; SPTR: A8EV36 Putative uncharacterized protein
YP_003654826.1	KEGG: abu:Abu_1561 hypothetical protein; SPTR: A8EV36 Putative uncharacterized protein
YP_003654827.1	KEGG: abu:Abu_0401 hypothetical protein; SPTR: A8ERV2 Putative uncharacterized protein
YP_003654828.1	COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR002302:IPR002300:IPR014729:IPR009008:IPR 009080:IPR001412; KEGG: abu:Abu_0402 leucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; SPTR: A8ERV3 Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_003654829.1	KEGG: abu:Abu_0403 hypothetical protein; SPTR: A8ERV4 Putative uncharacterized protein
YP_003654830.1	COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR001645:IPR013221:IPR004101; KEGG: abu:Abu_0404 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; PRIAM: Tetrahydrofolate synthase; SPTR: A8ERV5 Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_003654831.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: pmx:PERMA_1977 peptidase, M23/M37 family; PFAM: Peptidase M23; SPTR: C0QST4 Peptidase, M23/M37 family; PFAM: Peptidase family M23
YP_003654832.1	COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: hha:Hhal_1996 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: C5F1N9 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583
YP_003654833.1	COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014021:IPR001650:IPR006935:IPR014001; KEGG: abu:Abu_0405 helicase; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ERV6 Probable helicase; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_003654834.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR003148:IPR006153:IPR016040; KEGG: cff:CFF8240_0767 sodium/hydrogen exchanger family protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; SPTR: C2A1I1 Kef-type K+ transport system, membrane component; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family
YP_003654835.1	COGs: COG3176 Putative hemolysin; InterPro IPR002123:IPR016181; KEGG: abu:Abu_0406 phospholipid/glycerol acyltransferase, hemolysin; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: A8ERV7 Phospholipid/glycerol acyltransferase, possible hemolysin; PFAM: Acyltransferase
YP_003654836.1	KEGG: abu:Abu_0407 hypothetical protein; SPTR: A8ERV8 Putative uncharacterized protein
YP_003654837.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003654838.1	KEGG: abu:Abu_0409 hypothetical protein; SPTR: A8ERW0 Putative uncharacterized protein
YP_003654839.1	COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR014021:IPR001650:IPR004576:IPR003711:IPR 011545:IPR005118:IPR014001:IPR019793; KEGG: abu:Abu_0410 transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ERW1 Transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_003654840.1	COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000700:IPR000160:IPR013163:IPR 013655:IPR001610; KEGG: wsu:WS1205 sensory box/GGDEF family protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; Cache type 2 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Q7M947 SENSORY BOX/GGDEF FAMILY PROTEIN; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: Cache domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_003654841.1	KEGG: abu:Abu_1090 hypothetical protein; SPTR: A8ETS6 Putative uncharacterized protein
YP_003654842.1	COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: abu:Abu_1089 cytochrome bd oxidase, subunit I; PFAM: cytochrome bd ubiquinol oxidase subunit I; SPTR: A8ETS5 Cytochrome bd oxidase, subunit I; PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_003654843.1	COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: abu:Abu_1088 cytochrome bd oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; SPTR: A8ETS4 Cytochrome bd oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_003654844.1	InterPro IPR003731; KEGG: nis:NIS_0145 hypothetical protein; SPTR: A6Q1A1 Putative uncharacterized protein; PFAM: Dinitrogenase iron-molybdenum cofactor
YP_003654845.1	COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646:IPR004647:IPR011167; KEGG: abu:Abu_1928 fumarate hydratase, class I; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: A8EW27 Fumarate hydratase, class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
YP_003654846.1	KEGG: abu:Abu_0413 putative periplasmic protein; SPTR: A8ERW4 Hypothetical periplasmic protein
YP_003654847.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: abu:Abu_0414 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ERW5 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654848.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR003661:IPR003594:IPR 009082; KEGG: abu:Abu_0415 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERW6 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003654849.1	COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: abu:Abu_0416 hypothetical protein; PFAM: HI0933 family protein; SPTR: A8ERW7 Putative uncharacterized protein; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275
YP_003654850.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: tdn:Suden_2063 hypothetical protein; PFAM: ABC-3 protein; SPTR: Q30NU4 ABC-3; PFAM: ABC 3 transport family
YP_003654851.1	COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: tdn:Suden_2064 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q30NU3 ABC transporter-related protein; PFAM: ABC transporter
YP_003654852.1	COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127:IPR006129:IPR006128; KEGG: lin:lin0191 hypothetical protein; PFAM: periplasmic solute binding protein; SPTR: Q92FB5 Lin0191 protein; PFAM: Periplasmic solute binding protein family
YP_003654853.1	KEGG: lsp:Bsph_4691 methyl-accepting chemotaxis protein
YP_003654854.1	COGs: COG1692 conserved hypothetical protein; InterPro IPR005235:IPR004843:IPR002114; KEGG: abu:Abu_0421 hypothetical protein; PFAM: metallophosphoesterase; SPTR: A8ERX2 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR00282
YP_003654855.1	COGs: COG2231 Uncharacterized protein related to Endonuclease III; InterPro IPR003265:IPR011257; KEGG: nam:NAMH_0368 endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: B9L833 Endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein
YP_003654856.1	KEGG: abu:Abu_0422 hypothetical protein; SPTR: A8ERX3 Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003654857.1	KEGG: abu:Abu_0423 hypothetical protein; SPTR: A8ERX4 Putative uncharacterized protein
YP_003654858.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: abu:Abu_0424 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: A8ERX5 Bifunctional ubiquinone/menaquinone biosynthesis methlytransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_003654859.1	COGs: COG1570 Exonuclease VII large subunit; InterPro IPR003753:IPR004365:IPR020579; KEGG: abu:Abu_0425 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: Exodeoxyribonuclease VII; SPTR: A8ERX6 Exodeoxyribonuclease 7 large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_003654860.1	COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: abu:Abu_0426 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: A8ERX7 Chemotaxis protein CheW; PFAM: CheW-like domain
YP_003654861.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: abu:Abu_0545 EAL/GGDEF domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ES88 EAL/GGDEF domain protein; PFAM: Response regulator receiver domain
YP_003654862.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR000014:IPR000700:IPR013767:IPR 011006; KEGG: wsu:WS1304 diguanylate cyclase (fragment); PFAM: response regulator receiver; PAS fold domain protein; SMART: response regulator receiver; SPTR: A8V332 DIGUANYLATE CYCLASE; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003654863.1	COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR015891; KEGG: abu:Abu_0427 peptidyl-prolyl cis-trans isomerase-like protein; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; PRIAM: Peptidylprolyl isomerase; SPTR: A8ERX8 Peptidyl-prolyl cis-trans isomerase-like protein; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_003654864.1	COGs: COG3411 Ferredoxin; InterPro IPR012335:IPR012336; KEGG: nis:NIS_0254 2Fe-2S ferredoxin; SPTR: A6Q1K9 2Fe-2S ferredoxin; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_003654865.1	COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR003190:IPR009010; KEGG: abu:Abu_0428 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: A8ERX9 Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_003654866.1	COGs: COG0718 conserved hypothetical protein; InterPro IPR004401; KEGG: abu:Abu_0429 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8ERY0 UPF0133 protein Abu_0429; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: conserved hypothetical protein TIGR00103
YP_003654867.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: abu:Abu_0430 geranyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: A8ERY1 Geranyltranstransferase; PFAM: Polyprenyl synthetase
YP_003654868.1	COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR020818:IPR001476:IPR011032; KEGG: abu:Abu_0431 10 kDa chaperonin; PFAM: Chaperonin Cpn10; SPTR: A8ERY2 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit
YP_003654869.1	COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844:IPR002423:IPR018370; KEGG: abu:Abu_0432 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: A8ERY3 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_003654870.1	InterPro IPR005358; KEGG: abu:Abu_0442 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: A8ERZ3 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153)
YP_003654871.1	COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR017932:IPR005855:IPR000583:IPR001347; KEGG: abu:Abu_0444 glucosamine--fructose-6-phosphate aminotransferase; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); SPTR: A8ERZ5 Glucosamine-fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_003654872.1	COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: tdn:Suden_1476 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: Q30QH8 Methionine adenosyltransferase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase
YP_003654873.1	COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR011762:IPR000438:IPR000022; KEGG: abu:Abu_0446 acetyl-CoA carboxylase subunit beta; PFAM: carboxyl transferase; SPTR: A8ERZ7 Acetyl-CoA carboxylase, carboxyltransferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_003654874.1	COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733:IPR013785; KEGG: abu:Abu_0447 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; SPTR: A8ERZ8 Thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_003654875.1	COGs: COG1576 conserved hypothetical protein; InterPro IPR003742; KEGG: abu:Abu_0448 hypothetical protein; PFAM: protein of unknown function DUF163; SPTR: A8ERZ9 Ribosomal RNA large subunit methyltransferase H; PFAM: Predicted SPOUT methyltransferase; TIGRFAM: conserved hypothetical protein TIGR00246
YP_003654876.1	COGs: COG1734 DnaK suppressor protein; InterPro IPR000962:IPR020458; KEGG: abu:Abu_2116 DnaK suppressor protein DksA; PFAM: zinc finger DksA/TraR C4-type; SPTR: A8EWK7 DnaK suppressor protein DksA; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_003654877.1	KEGG: abu:Abu_0449 hypothetical protein; SPTR: A8ES00 Putative uncharacterized protein
YP_003654878.1	COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269:IPR013785:IPR018517; KEGG: abu:Abu_0450 tRNA-dihydrouridine synthase; PFAM: dihydrouridine synthase DuS; SPTR: A8ES01 Probable tRNA-dihydrouridine synthase; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family
YP_003654879.1	COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456; KEGG: abu:Abu_0451 ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; SPTR: A8ES02 Ribosomal protein L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase
YP_003654880.1	COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936:IPR011546:IPR003959:IPR000642:IPR 003593:IPR003960; KEGG: abu:Abu_0452 cell division protein FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 FtsH extracellular; peptidase M41; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: A8ES03 Cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_003654881.1	KEGG: tdn:Suden_1669 putative phosphatidylserine decarboxylase; SPTR: Q30PY5 Putative phosphatidylserine decarboxylase
YP_003654882.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterProIPR000891:IPR005671:IPR013709:IPR013785:IPR 002034; KEGG: abu:Abu_0456 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; SPTR: A8ES07 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type
YP_003654883.1	InterPro IPR002187:IPR011435:IPR011322; KEGG: sun:SUN_1865 hypothetical protein; PFAM: protein of unknown function DUF1538; SPTR: B6BH38 Permease, major facilitator superfamily; PFAM: Protein of unknown function (DUF1538)
YP_003654884.1	InterPro IPR012335:IPR012336; KEGG: abu:Abu_0457 hypothetical protein; SPTR: A8ES08 Putative uncharacterized protein; PFAM: Thioredoxin
YP_003654885.1	KEGG: abu:Abu_0458 hypothetical protein; SPTR: A8ES09 Putative uncharacterized protein
YP_003654886.1	COGs: COG0249 Mismatch repair ATPase (MutS family); InterProIPR007695:IPR007696:IPR000432:IPR016151:IPR 007860; KEGG: abu:Abu_0459 mismatch repair ATPase; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: A8ES10 Mismatch repair ATPase; PFAM: MutS domain V; Protein of unknown function (DUF968); MutS domain I; MutS domain III
YP_003654887.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: mlo:mll5179 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Q98CE8 Mll5179 protein; PFAM: alpha/beta hydrolase fold
YP_003654888.1	COGs: COG0833 Amino acid transporter; InterPro IPR004757:IPR004841:IPR002293; KEGG: mmw:Mmwyl1_0475 ethanolamine transproter; PFAM: amino acid permease-associated region; SPTR: A6VSI3 Ethanolamine transproter; TIGRFAM: ethanolamine transproter; PFAM: Amino acid permease; TIGRFAM: ethanolamine permease
YP_003654889.1	COGs: COG4302 Ethanolamine ammonia-lyase small subunit; InterPro IPR009246; KEGG: mmw:Mmwyl1_0476 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain; PRIAM: Ethanolamine ammonia-lyase; SPTR: A0Y3G4 Ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain (EutC)
YP_003654890.1	COGs: COG4303 Ethanolamine ammonia-lyase large subunit; InterPro IPR010628; KEGG: mmw:Mmwyl1_0477 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit; PRIAM: Ethanolamine ammonia-lyase; SPTR: A0Y3G3 Ethanolamine ammonia-lyase, large subunit, heavy chain; PFAM: Ethanolamine ammonia lyase large subunit (EutB)
YP_003654891.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR007087; KEGG: abu:Abu_0472 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8ES23 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003654892.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1967 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EW66 Chemotaxis protein CheY; PFAM: Response regulator receiver domain
YP_003654893.1	InterPro IPR011701:IPR016196; KEGG: aeh:Mlg_2061 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Q0A6Y4 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_003654894.1	COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR006063:IPR006062:IPR013785:IPR011060; KEGG: abu:Abu_0473 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; SPTR: A8ES24 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_003654895.1	COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR001509:IPR013549:IPR016040; KEGG: abu:Abu_0474 hypothetical protein; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: A8ES25 Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777
YP_003654896.1	COGs: COG0118 Glutamine amidotransferase; InterPro IPR017926:IPR010139:IPR000991:IPR016226; KEGG: abu:Abu_0475 glutamine amidotransferase HisH; PFAM: glutamine amidotransferase class-I; SPTR: A8ES26 Glutamine amidotransferase HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_003654897.1	COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: abu:Abu_0476 transformation system protein; PFAM: phosphoribosyltransferase; SPTR: A8ES27 Transformation system protein; PFAM: Phosphoribosyl transferase domain
YP_003654898.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_2291 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EX26 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003654899.1	COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cpb:Cphamn1_1655 multi antimicrobial extrusion protein MatE; PFAM: multi antimicrobial extrusion protein MatE; SPTR: C2A075 Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_003654900.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR012318:IPR014710:IPR011991:IPR018490; KEGG: ccv:CCV52592_1641 hypothetical protein; SPTR: A7GWN7 Putative uncharacterized protein
YP_003654901.1	COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterPro IPR017896:IPR001450:IPR017900; KEGG: cco:CCC13826_1915 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6DB54 HYDROGENASE-3 SMALL SUBUNIT; PFAM: 4Fe-4S binding domain
YP_003654902.1	COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003916; KEGG: cco:CCC13826_1914 L-alanyl-D-glutamate peptidase; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A6DB53 NADH dehydrogenase (Quinone); PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003654903.1	COGs: COG0650 Formate hydrogenlyase subunit 4; KEGG: cco:CCC13826_1913 hypothetical protein; SPTR: A7ZBL0 Hydrogenase-4 component C; PFAM: NADH dehydrogenase
YP_003654904.1	COGs: COG4237 Hydrogenase 4 membrane component (E); InterPro IPR001133; KEGG: ccv:CCV52592_1039 hydrogenase 4 membrane subunit; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: A7GWM9 Hydrogenase-4 component E; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_003654905.1	COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003916; KEGG: cco:CCC13826_1911 hypothetical protein; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A7ZBL2 Hydrogenase-4 component F; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003654906.1	COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001268:IPR001501:IPR001135; KEGG: cco:CCC13826_0711 DNA-3-methyladenine glycosylase I; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; SPTR: A7ZBL3 Hydrogenase-4 component G; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase
YP_003654907.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017896:IPR001450:IPR009051:IPR017900; KEGG: wsu:WS1837 formate hydrogenlyase complex iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1ZZE5 NADH:ubiquinone oxidoreductase chain I-like protein; PFAM: 4Fe-4S binding domain
YP_003654908.1	COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137:IPR006138; KEGG: cco:CCC13826_0713 hydrogenase-4 component I; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: A7ZBL5 Hydrogenase-4 component I; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_003654909.1	InterPro IPR010005; KEGG: cco:CCC13826_0714 hypothetical protein; SPTR: C8PJ86 Putative uncharacterized protein; PFAM: Formate hydrogenlyase maturation protein HycH
YP_003654910.1	InterPro IPR000671; KEGG: wsu:WS1834 hypothetical protein; PFAM: peptidase M52 hydrogen uptake protein; SPTR: C6RGQ3 Hydrogenase maturation protease family protein; TIGRFAM: hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease
YP_003654911.1	COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: cco:CCC13826_0716 formate/nitrite transporter; PFAM: formate/nitrite transporter; SPTR: A7ZBL8 Formate/nitrite transporter; PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter
YP_003654912.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006478:IPR006963:IPR006656:IPR006657:IPR 009010; KEGG: cco:CCC13826_2031 putative Myb2 protein; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: C8PJ76 Formate dehydrogenase H; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type
YP_003654913.1	KEGG: hypothetical protein; SPTR: A2TYZ8 Thioredoxin family protein
YP_003654914.1	KEGG: abu:Abu_0477 hypothetical protein; SPTR: A8ES28 Putative uncharacterized protein
YP_003654915.1	COGs: COG0481 Membrane GTPase LepA; InterProIPR005225:IPR006297:IPR000795:IPR004161:IPR 000640:IPR013842:IPR009022:IPR009000; KEGG: abu:Abu_0478 GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SPTR: A8ES29 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_003654916.1	COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR003367:IPR006664; KEGG: abu:Abu_0481 outer membrane fibronectin-binding protein; PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat; SPTR: A8ES32 Outer membrane fibronectin-binding protein; PFAM: OmpA family
YP_003654917.1	COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946:IPR000836; KEGG: abu:Abu_0482 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: A8ES33 Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_003654918.1	COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506:IPR018318:IPR014729; KEGG: abu:Abu_0484 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA methyl transferase-like; SPTR: A8ES35 tRNA-specific 2-thiouridylase mnmA 1; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_003654919.1	COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506:IPR018318:IPR014729; KEGG: abu:Abu_0485 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; SPTR: A8ES36 tRNA-specific 2-thiouridylase mnmA 2; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_003654920.1	COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550:IPR002052; KEGG: abu:Abu_0486 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; SPTR: A8ES37 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_003654921.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994:IPR001131; KEGG: abu:Abu_0487 prolidase (Xaa-Pro dipeptidase) (PepQ); PFAM: peptidase M24; SPTR: A8ES38 Prolidase (Xaa-Pro dipeptidase) (PepQ); PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_003654922.1	COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874:IPR018509; KEGG: abu:Abu_0488 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: A8ES39 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II
YP_003654923.1	COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: abu:Abu_0489 chlorohydrolase; PFAM: amidohydrolase; SPTR: A8ES40 Amidohydrolase family protein; PFAM: Amidohydrolase family
YP_003654924.1	COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004635:IPR002142; KEGG: abu:Abu_0490 protease IV (PspA); PFAM: peptidase S49; SPTR: A8ES41 Protease IV (PspA); TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_003654925.1	COGs: COG0282 Acetate kinase; InterPro IPR004372:IPR000890; KEGG: abu:Abu_0492 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: A8ES43 Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_003654926.1	COGs: COG0280 Phosphotransacetylase; InterPro IPR004614:IPR002505:IPR012147; KEGG: abu:Abu_0493 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; SPTR: A8ES44 Phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase
YP_003654927.1	KEGG: wsu:WS1017 hypothetical protein; SPTR: C1SLV6 Putative uncharacterized protein
YP_003654928.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057; KEGG: wsu:WS0114 putative transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: Q8RSF6 Putative transcriptional regulator protein
YP_003654929.1	COGs: COG0282 Acetate kinase; InterPro IPR004372:IPR000890; KEGG: abu:Abu_0494 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: A8ES45 Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_003654930.1	KEGG: abu:Abu_0503 DNA polymerase III, epsilon subunit; SPTR: A8ES54 DNA polymerase III, epsilon subunit; PFAM: Exonuclease
YP_003654931.1	COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterProIPR000595:IPR000644:IPR005105:IPR018821:IPR 014710:IPR018490; KEGG: abu:Abu_0504 cyclic nucleotide-binding domain-containing protein; PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; CBS domain containing protein; cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein; SPTR: A8ES55 Cyclic nucleotide-binding domain protein; PFAM: CBS domain; Putative nucleotidyltransferase substrate binding domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294
YP_003654932.1	COGs: COG4147 symporter; InterPro IPR001734:IPR019899:IPR018212; KEGG: paa:Paes_1651 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Q2BJ80 Sodium:solute symporter family protein; TIGRFAM: putative sodium symporter protein; PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily
YP_003654933.1	COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: abu:Abu_0506 hypothetical protein; SPTR: A8ES57 Putative uncharacterized protein; TIGRFAM: putative solute symporter protein; TIGRFAM: probable solute:sodium symporter small subunit
YP_003654934.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: abu:Abu_0507 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ES58 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003654935.1	COGs: COG4564 Signal transduction histidine kinase; InterProIPR005467:IPR013163:IPR003661:IPR003594:IPR 009082; KEGG: abu:Abu_0508 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Cache type 2 domain protein; SMART: histidine kinase A domain protein; SPTR: A8ES59 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003654936.1	COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR008136; KEGG: abu:Abu_0517 CinA-like protein; PFAM: CinA domain protein; SPTR: A8ES60 CinA-like protein; PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_003654937.1	COGs: COG0579 dehydrogenase; InterPro IPR006076; KEGG: abu:Abu_0518 malate:quinone oxidoreductase; PFAM: FAD dependent oxidoreductase; PRIAM: Malate dehydrogenase (acceptor); SPTR: A8ES61 Malate:quinone oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_003654938.1	COGs: COG0060 Isoleucyl-tRNA synthetase; InterProIPR002301:IPR002300:IPR013155:IPR010663:IPR 015905:IPR014729:IPR009080:IPR009008:IPR001412; KEGG: abu:Abu_0519 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; zinc finger Fpg domain protein; SPTR: A8ES62 Isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase
YP_003654939.1	SPTR: Q25657 Apical membrane antigen-1
YP_003654940.1	COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: abu:Abu_0520 NifU-like protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: A8ES63 Conserved hypothetical NifU-like protein; PFAM: NifU-like domain
YP_003654941.1	KEGG: abu:Abu_0521 hypothetical protein; SPTR: A8ES64 Putative uncharacterized protein
YP_003654942.1	COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR005761:IPR013221:IPR004101:IPR018109; KEGG: abu:Abu_0522 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8ES65 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases
YP_003654943.1	KEGG: cco:CCC13826_0148 hypothetical protein; SPTR: A7ZD70 Putative vesicular transport factor Uso1p
YP_003654944.1	InterPro IPR002035; KEGG: nis:NIS_0403 von Willebrand factor type A domain-containing protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: A6Q208 von Willebrand factor type A domain protein; PFAM: von Willebrand factor type A domain
YP_003654945.1	KEGG: sun:SUN_2004 hypothetical protein; SPTR: A6QBT7 Putative uncharacterized protein
YP_003654946.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: tdn:Suden_0654 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Q30SU8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_003654947.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR016366; KEGG: nis:NIS_0400 AAA family ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: A6Q205 ATPase, AAA family; PFAM: ATPase family associated with various cellular activities (AAA)
YP_003654948.1	InterPro IPR003782:IPR012335:IPR012336; KEGG: cco:CCC13826_0870 SCO1/SenC family protein; PFAM: electron transport protein SCO1/SenC; SPTR: B6BJP0 SCO1/SenC superfamily; PFAM: SCO1/SenC
YP_003654949.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004090; KEGG: abu:Abu_0789 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESY0 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003654950.1	COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865:IPR018130; KEGG: abu:Abu_0540 30S ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: A8ES83 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_003654951.1	COGs: COG0264 Translation elongation factor Ts; InterProIPR001816:IPR000449:IPR014039:IPR009060:IPR 018101; KEGG: abu:Abu_0541 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; SPTR: A8ES84 Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_003654952.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: abu:Abu_0542 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ES85 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003654953.1	KEGG: abu:Abu_0543 hypothetical protein; SPTR: A8ES86 Putative uncharacterized protein
YP_003654954.1	COGs: COG0194 Guanylate kinase; InterPro IPR008144:IPR017665:IPR008145:IPR020590; KEGG: abu:Abu_0544 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: A8ES87 Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_003654955.1	COGs: COG2200 FOG: EAL domain; InterPro IPR001789:IPR001633:IPR000160:IPR011006; KEGG: abu:Abu_0545 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; response regulator receiver; GGDEF domain containing protein; SMART: EAL domain protein; response regulator receiver; GGDEF domain containing protein; SPTR: A8ES88 EAL/GGDEF domain protein; PFAM: EAL domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003654956.1	COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR006403:IPR006416:IPR001757:IPR 008250:IPR005834:IPR001756:IPR001877:IPR018303; KEGG: abu:Abu_0546 cation-transporting ATPase, P-type; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: A8ES89 Cation-transporting ATPase, P-type; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_003654957.1	InterPro IPR004714; KEGG: abu:Abu_0547 hypothetical protein; PFAM: cytochrome oxidase maturation protein cbb3-type; SPTR: A8ES90 Putative uncharacterized protein; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type
YP_003654958.1	InterPro IPR009056; KEGG: sun:SUN_0302 periplasmic nitrate reductase, small subunit; SPTR: A6Q703 Periplasmic nitrate reductase, small subunit
YP_003654959.1	COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003593; KEGG: tdn:Suden_0485 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B6BMG0 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003654960.1	COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015:IPR019772; KEGG: abu:Abu_0550 ferrochelatase; PFAM: ferrochelatase; PRIAM: Ferrochelatase; SPTR: A8ES93 Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_003654961.1	COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: nam:NAMH_1747 hypothetical protein; PFAM: AMMECR1 domain protein; SPTR: B9L6Y4 Putative uncharacterized protein; PFAM: AMMECR1; TIGRFAM: conserved hypothetical protein TIGR00296
YP_003654962.1	COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: sun:SUN_0977 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: C1ZYW0 Predicted dioxygenase; PFAM: Memo-like protein
YP_003654963.1	COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: abu:Abu_0553 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: A8ES96 Putative uncharacterized protein; PFAM: DUF218 domain
YP_003654964.1	COGs: COG2996 conserved hypothetical protein; InterPro IPR016027:IPR014464; KEGG: abu:Abu_0556 hypothetical protein; SPTR: A8ES99 Putative uncharacterized protein; PFAM: S1 RNA binding domain
YP_003654965.1	COGs: COG2077 Peroxiredoxin; InterProIPR017936:IPR013740:IPR012335:IPR012336:IPR 018219; KEGG: abu:Abu_0557 thiol peroxidase; PFAM: Redoxin domain protein; SPTR: A8ESA0 Thiol peroxidase; PFAM: Redoxin
YP_003654966.1	COGs: COG3213 Uncharacterized protein involved in response to NO; KEGG: abu:Abu_0560 hypothetical protein; SPTR: A8ESA3 Putative uncharacterized protein; PFAM: NnrS protein
YP_003654967.1	COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: abu:Abu_0561 putative sulfite oxidase subunit YedY; PFAM: oxidoreductase molybdopterin binding; SPTR: A8ESA4 Oxidoreductase, molybdopterin binding; PFAM: Oxidoreductase molybdopterin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003654968.1	COGs: COG2717 membrane protein; InterPro IPR013130; KEGG: abu:Abu_0562 hypothetical protein; PFAM: Ferric reductase domain protein transmembrane component domain; SPTR: A8ESA5 Conserved hypothetical membrane protein; PFAM: Ferric reductase like transmembrane component
YP_003654969.1	COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953:IPR000172; KEGG: sun:SUN_2354 oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A6QCT1 Oxidoreductase; PFAM: GMC oxidoreductase
YP_003654970.1	KEGG: sun:SUN_2353 hypothetical protein; SPTR: Q1PWT4 Putative uncharacterized protein
YP_003654971.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: abu:Abu_0563 ATP-dependent DNA helicase UvrD; PFAM: UvrD/REP helicase; SPTR: A8ESA6 ATP-dependent DNA helicase, UvrD/Rep family; PFAM: UvrD/REP helicase
YP_003654972.1	COGs: COG2200 FOG: EAL domain; InterProIPR000014:IPR000700:IPR001633:IPR000160:IPR 004010:IPR013163:IPR013655; KEGG: pin:Ping_1204 sensor histidine kinase PAS domain-containing protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; Cache type 2 domain protein; Cache domain protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: C1SJV9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_003654973.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: pin:Ping_2702 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A1SY47 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003654974.1	COGs: COG0525 Valyl-tRNA synthetase; InterProIPR002303:IPR002300:IPR013155:IPR019499:IPR 019754:IPR014729:IPR009008:IPR009080:IPR010978:IPR001412; KEGG: abu:Abu_0581 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: A8ESC4 Valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: putative zinc finger domain, LRP1 type; valyl-tRNA synthetase
YP_003654975.1	KEGG: sun:SUN_0191 hypothetical protein; SPTR: A6Q6P2 Putative uncharacterized protein
YP_003654976.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: tdn:Suden_0619 sulfide-quinone reductase, putative; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q30SY3 Sulfide: quinone oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003654977.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: tdn:Suden_0878 secretion protein HlyD; PFAM: secretion protein HlyD family protein; SPTR: Q30S75 Secretion protein HlyD; PFAM: HlyD family secretion protein
YP_003654978.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: tdn:Suden_0877 AcrB/AcrD/AcrF family protein; PFAM: acriflavin resistance protein; SPTR: Q30S76 AcrB/AcrD/AcrF family protein; PFAM: AcrB/AcrD/AcrF family
YP_003654979.1	COGs: COG0841 Cation/multidrug efflux pump; KEGG: sun:SUN_0555 acriflavin resistance AcrB/AcrD/AcrF family protein; SPTR: B6BLH4 Cation efflux system; PFAM: AcrB/AcrD/AcrF family
YP_003654980.1	KEGG: sdn:Sden_0080 hypothetical protein; SPTR: Q12T49 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2846)
YP_003654981.1	InterPro IPR012577; KEGG: vap:Vapar_2502 NIPSNAP family containing protein; PFAM: NIPSNAP family containing protein; SPTR: Q2BJ33 Putative uncharacterized protein; PFAM: NIPSNAP
YP_003654982.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: abu:Abu_2225 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8EWW5 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003654983.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: abu:Abu_2224 HlyD family multidrug efflux protein; PFAM: secretion protein HlyD family protein; SPTR: A8EWW4 Multidrug efflux protein, HlyD family; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_003654984.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: abu:Abu_2223 Acr family multidrug efflux protein; PFAM: acriflavin resistance protein; SPTR: A8EWW3 Multidrug efflux protein, Acr family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_003654985.1	COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: abu:Abu_2222 outer membrane efflux lipoprotein; PFAM: outer membrane efflux protein; SPTR: A8EWW2 Outer membrane efflux lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_003654986.1	COGs: COG1897 Homoserine trans-succinylase; InterPro IPR005697; KEGG: cce:Ccel_3331 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; PRIAM: Homoserine O-succinyltransferase; SPTR: B8I164 Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase
YP_003654987.1	KEGG: pin:Ping_1556 putative lipoprotein; SPTR: C1ZZB8 Putative uncharacterized protein
YP_003654988.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: sun:SUN_0473 cation efflux transporter; PFAM: acriflavin resistance protein; SPTR: A6Q7H4 Cation/multidrug efflux transporter, RND superfamily; PFAM: AcrB/AcrD/AcrF family
YP_003654989.1	COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR003660:IPR000160; KEGG: tdn:Suden_1196 diguanylate phosphodiesterase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: C0N243 HAMP domain protein; PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003654990.1	COGs: COG3672 periplasmic protein; InterPro IPR010319; KEGG: dps:DP0518 hypothetical protein; PFAM: transglutaminase family protein cysteine peptidase BTLCP; SPTR: Q6AQX7 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF920)
YP_003654991.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: abu:Abu_0585 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ESC8 Major facilitator superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003654992.1	COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637; KEGG: abu:Abu_0586 HAM1-like protein; PFAM: Ham1 family protein; PRIAM: Nucleoside-triphosphatase; SPTR: A8ESC9 Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_003654993.1	KEGG: abu:Abu_0587 hypothetical protein; SPTR: A8ESD0 Putative uncharacterized protein
YP_003654994.1	InterPro IPR012902; KEGG: abu:Abu_0588 hypothetical protein; SPTR: A8ESD1 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_003654995.1	KEGG: abu:Abu_0589 hypothetical protein; SPTR: A8ESD2 Putative uncharacterized protein
YP_003654996.1	COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304:IPR004455:IPR016040; KEGG: abu:Abu_0590 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: A8ESD3 Pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_003654997.1	COGs: COG4105 DNA uptake lipoprotein; KEGG: abu:Abu_0591 hypothetical protein; SPTR: A8ESD4 Conserved hypothetical membrane protein
YP_003654998.1	COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815:IPR003111:IPR003959:IPR008269:IPR 001984:IPR020568:IPR003593:IPR008268; KEGG: abu:Abu_0592 ATP-dependent protease La; PFAM: AAA ATPase central domain protein; peptidase S16 lon domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: A8ESD5 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_003654999.1	KEGG: abu:Abu_1148 hypothetical protein; SPTR: A8ETY4 Putative uncharacterized protein
YP_003655000.1	InterPro IPR002610; KEGG: abu:Abu_0593 rhomboid-like protein; PFAM: Rhomboid family protein; SPTR: A8ESD6 Rhomboid-like protein; PFAM: Rhomboid family
YP_003655001.1	COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR017963:IPR001126; KEGG: abu:Abu_1492 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: A8EUX3 DNA polymerase IV; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif
YP_003655002.1	COGs: COG5485 ester cyclase; InterPro IPR009959; KEGG: abu:Abu_2016 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: A8EWB0 Putative uncharacterized protein; PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related
YP_003655003.1	COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: tdn:Suden_1691 Mg2+ transporter protein, CorA-like; PFAM: Mg2 transporter protein CorA family protein; SPTR: B6BJC4 CorA-like Mg2+ transporter protein; PFAM: CorA-like Mg2+ transporter protein
YP_003655004.1	InterPro IPR008007; KEGG: tdn:Suden_1689 peptidase M42; PFAM: peptidase M42 family protein; SPTR: B6BHI8 Peptidase M42; PFAM: M42 glutamyl aminopeptidase
YP_003655005.1	COGs: COG3608 deacylase; InterPro IPR007036; KEGG: tdn:Suden_1688 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Q30PW6 Succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family
YP_003655006.1	COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761:IPR004666:IPR013651:IPR013816; KEGG: abu:Abu_2188 ribosomal protein S6 modification protein; PFAM: RimK domain protein ATP-grasp; SPTR: B6BHI6 S6 modification enzyme RimK; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family
YP_003655007.1	COGs: COG4067 conserved hypothetical protein; InterPro IPR008503; KEGG: tdn:Suden_1686 hypothetical protein; PFAM: protein of unknown function DUF785; SPTR: Q30PW8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF785)
YP_003655008.1	COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: abu:Abu_2151 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: A8EWP2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477)
YP_003655009.1	COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: abu:Abu_2152 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: A8EWP3 Conserved hypothetical membrane protein (DUF477); PFAM: Domain of unknown function (DUF477)
YP_003655010.1	COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: abu:Abu_2150 LemA protein; PFAM: LemA family protein; SPTR: A8EWP1 LemA protein; PFAM: LemA family
YP_003655011.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_1749 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EVM3 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655012.1	COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: gur:Gura_1130 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A5GAR3 Transcriptional regulator, MarR family; PFAM: MarR family
YP_003655013.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198:IPR002347:IPR016040; KEGG: tdn:Suden_1856 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Q30PF1 Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_003655014.1	InterPro IPR005953:IPR002379:IPR000454:IPR020537; KEGG: abu:Abu_1748 F0F1 ATP synthase subunit C; PFAM: H+transporting two-sector ATPase C subunit; SPTR: A8EVM2 ATP synthase subunit c; TIGRFAM: ATP synthase F0, C subunit; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c
YP_003655015.1	COGs: COG2200 FOG: EAL domain; InterProIPR000014:IPR000700:IPR001633:IPR000160:IPR 013767:IPR001610; KEGG: wsu:WS0775 nitrogen fixation positive protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Q7M9P6 NITROGEN FIXATION POSITIVE PROTEIN; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_003655016.1	KEGG: hac:Hac_0445 putative outer membrane protein; SPTR: Q17YK0 Putative outer membrane protein; PFAM: Domain of Unknown Function (DUF748)
YP_003655017.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: abu:Abu_1725 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EVJ9 DNA-binding response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655018.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_1831 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8EVU8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655019.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR003661:IPR003594:IPR 004358:IPR009082; KEGG: abu:Abu_1730 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EVK4 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box
YP_003655020.1	KEGG: cac:CA_P0158 hypothetical protein; SPTR: Q97TE6 Putative uncharacterized protein
YP_003655021.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR001509:IPR002347:IPR002198:IPR016040; KEGG: tcx:Tcr_0945 short-chain dehydrogenase/reductase SDR; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q31H33 Short-chain alcohol dehydrogenase homolog; PFAM: short chain dehydrogenase
YP_003655022.1	InterPro IPR000620; KEGG: wsu:WS0127 putative integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1ZYV7 Integral membrane protein DUF6; PFAM: EamA-like transporter family
YP_003655023.1	COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterProIPR018060:IPR003313:IPR000005:IPR012287:IPR 009057:IPR018062; KEGG: nam:NAMH_1769 transcriptional regulator, AraC/XylS family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; SPTR: B9L6Z7 Transcriptional regulator, AraC/XylS family; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003655024.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR017936:IPR003782:IPR012335:IPR012336; KEGG: ccv:CCV52592_1941 SCO1/SenC family protein; PFAM: electron transport protein SCO1/SenC; SPTR: A7GZN3 SCO1/SenC family protein; PFAM: SCO1/SenC
YP_003655025.1	KEGG: dar:Daro_1576 hypothetical protein; SPTR: C1ZXW1 Putative uncharacterized protein
YP_003655026.1	COGs: COG2847 conserved hypothetical protein; InterPro IPR007410; KEGG: vsa:VSAL_II0797 hypothetical protein; PFAM: protein of unknown function DUF461; SPTR: Q2BJZ9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF461)
YP_003655027.1	COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: abu:Abu_1374 sodium:hydrogen antiporter; PFAM: Na+/H+ antiporter NhaA; SPTR: B6BJD0 Na+/H+ antiporter NhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA
YP_003655028.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: abu:Abu_1740 FUR family transcriptional regulator; PFAM: ferric-uptake regulator; SPTR: A8EVL4 Transcriptional regulator, Fur family; PFAM: Ferric uptake regulator family
YP_003655029.1	COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: abu:Abu_1739 putative cation ABC transporter, periplasmic-binding protein; PFAM: periplasmic solute binding protein; SPTR: A8EVL3 Putative cation ABC transporter, periplasmic-binding protein; PFAM: Periplasmic solute binding protein family
YP_003655030.1	COGs: COG2215 ABC-type uncharacterized transport system permease component; InterPro IPR011541; KEGG: abu:Abu_1738 putative nickel transporter; PFAM: high-affinity nickel-transporter; SPTR: A8EVL2 Putative nickel transporter; PFAM: High-affinity nickel-transport protein
YP_003655031.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004090; KEGG: abu:Abu_1831 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EVU8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655032.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660; KEGG: abu:Abu_0789 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ESY0 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655033.1	COGs: COG0397 conserved hypothetical protein; InterPro IPR003846; KEGG: sun:SUN_1621 hypothetical protein; PFAM: protein of unknown function UPF0061; SPTR: A6QAR2 Putative uncharacterized protein; PFAM: Uncharacterized ACR, YdiU/UPF0061 family
YP_003655034.1	InterPro IPR007372; KEGG: hps:HPSH_01580 hypothetical protein; PFAM: YceI family protein; SPTR: B2USD6 Putative uncharacterized protein; PFAM: YceI-like domain
YP_003655035.1	KEGG: ttu:TERTU_1535 hypothetical protein; SPTR: C5BTA8 Putative uncharacterized protein
YP_003655036.1	COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000700:IPR000160:IPR013767:IPR 001610; KEGG: tdn:Suden_1041 diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C1SKH4 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_003655037.1	InterPro IPR011637; KEGG: maq:Maqu_0059 DoxX family protein; PFAM: DoxX family protein; SPTR: B4WYL3 DoxX subfamily, putative; PFAM: DoxX
YP_003655038.1	KEGG: dze:Dd1591_1059 DEAD/DEAH box helicase domain protein; SPTR: C8QTF8 DEAD/DEAH box helicase domain protein
YP_003655039.1	KEGG: fjo:Fjoh_2384 putative inner membrane protein translocase component YidC; SPTR: B9CRQ2 Conserved domain protein
YP_003655040.1	COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744:IPR002052; KEGG: abu:Abu_0606 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: A8ESE7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF59
YP_003655041.1	COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: abu:Abu_0607 putative SUF regulatory protein; PFAM: Fe-S metabolism associated SufE; SPTR: A8ESE8 Putative suf regulatory protein; PFAM: Fe-S metabolism associated domain
YP_003655042.1	COGs: COG0520 Selenocysteine lyase; InterProIPR000192:IPR015421:IPR015424:IPR000276:IPR 020578; KEGG: abu:Abu_0608 selenocysteine lyase/cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: A8ESE9 Selenocysteine lyase/Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_003655043.1	COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: abu:Abu_0609 Fe-S assembly protein; PFAM: SufBD protein; SPTR: A8ESF0 Fe-S assembly protein; PFAM: Uncharacterized protein family (UPF0051)
YP_003655044.1	COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439:IPR010230:IPR003593:IPR017871; KEGG: abu:Abu_0610 Fe-S assembly ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ESF1 Fe-S assembly ABC transporter, ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_003655045.1	COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231:IPR000825; KEGG: abu:Abu_0611 Fe-S assembly ABC transporter, permease protein; PFAM: SufBD protein; SPTR: A8ESF2 Fe-S assembly ABC transporter, permease protein; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_003655046.1	COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterProIPR017773:IPR000192:IPR015421:IPR015424:IPR 000834:IPR016454; KEGG: abu:Abu_0612 cysteine desulfurase/aminotransferase (IscS/NifS); PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: A8ESF3 Cysteine desulfurase/aminotransferase (IscS/NifS); TIGRFAM: cysteine desulfurase, NifS family; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase, NifS family, epsilon proteobacteria type; cysteine desulfurase NifS
YP_003655047.1	COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871:IPR007419:IPR001075:IPR016217; KEGG: abu:Abu_0613 NifU-like protein; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; SPTR: A8ESF4 NifU-like protein; PFAM: NifU-like N terminal domain; BFD-like [2Fe-2S] binding domain; NifU-like domain; TIGRFAM: Fe-S cluster assembly protein NifU
YP_003655048.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016162:IPR016161; KEGG: rle:RL3613 putative aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Q1YQB8 Aldehyde dehydrogenase family protein; PFAM: Aldehyde dehydrogenase family
YP_003655049.1	COGs: COG0554 Glycerol kinase; InterPro IPR005999:IPR018484:IPR018485:IPR018483; KEGG: rde:RD1_2883 glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: B6B1Z4 Glycerol kinase; TIGRFAM: glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_003655050.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR014597; KEGG: rhi:NGR_c31000 putative periplasmic binding component of ABC transporter; SPTR: A0YAC2 Extracellular solute-binding protein, family 1
YP_003655051.1	COGs: COG5477 small integral membrane protein; InterPro IPR018678; KEGG: rsk:RSKD131_0979 hypothetical protein; PFAM: Protein of unknown function DUF2160, transmembrane; SPTR: A0YAC3 Putative uncharacterized protein; PFAM: Predicted small integral membrane protein (DUF2160)
YP_003655052.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pde:Pden_4389 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A0YAC4 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003655053.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rsk:RSKD131_0981 binding-protein-dependent transport systems inner membrane component precursor; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q3J313 ABC sugar (Glycerol) transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003655054.1	COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR008995:IPR003593; KEGG: jan:Jann_4103 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A0YAC6 ABC transporter related protein; PFAM: ABC transporter
YP_003655055.1	COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR013611:IPR008995; KEGG: jan:Jann_4104 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SPTR: B7RIL5 ABC sugar (Glycerol) transporter, ATPase subunit; PFAM: ABC transporter
YP_003655056.1	COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076:IPR000447:IPR000630; KEGG: bid:Bind_0378 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: B2IE07 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_003655057.1	COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: lmo:lmo1974 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Q8Y5T1 Lmo1974 protein; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003655058.1	COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: lmo:lmo1974 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Q8Y5T1 Lmo1974 protein; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003655059.1	COGs: COG0165 Argininosuccinate lyase; InterPro IPR009049:IPR000362:IPR003031:IPR008948; KEGG: abu:Abu_0616 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: A8ESF7 Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_003655060.1	COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR001789:IPR002545:IPR011006; KEGG: abu:Abu_0617 chemotaxis signal transduction protein CheV; PFAM: response regulator receiver; CheW domain protein; SMART: response regulator receiver; CheW domain protein; SPTR: A8ESF8 Chemotaxis signal transduction protein CheV; PFAM: CheW-like domain; Response regulator receiver domain
YP_003655061.1	COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1; InterPro IPR000594:IPR016040:IPR009036; KEGG: abu:Abu_0618 MoeB/ThiF family protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: A8ESF9 MoeB/ThiF family protein; PFAM: ThiF family
YP_003655062.1	COGs: COG0782 Transcription elongation factor; InterPro IPR006359:IPR001437; KEGG: abu:Abu_0619 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; SPTR: A8ESG0 Transcription elongation factor greA; TIGRFAM: transcription elongation factor GreA; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA
YP_003655063.1	COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: abu:Abu_0620 hypothetical protein; PFAM: metallophosphoesterase; SPTR: A8ESG1 Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase
YP_003655064.1	KEGG: cac:CAC0446 MutT/NUDIX family hydrolase; SPTR: Q97LV8 Uncharacterized Nudix hydrolase CA_C0446
YP_003655065.1	COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterProIPR001943:IPR014021:IPR001650:IPR004807:IPR 006935:IPR009055:IPR014001; KEGG: abu:Abu_0621 excinuclease ABC subunit B; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ESG2 UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_003655066.1	InterProIPR000223:IPR019759:IPR011056:IPR015927:IPR 019758; KEGG: abu:Abu_0636 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: A8ESH7 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_003655067.1	InterPro IPR007712; KEGG: sun:SUN_1367 plasmid stabilization system protein protein; PFAM: plasmid stabilization system; SPTR: Q8GNE5 Putative uncharacterized protein; PFAM: Plasmid stabilisation system protein
YP_003655068.1	InterPro IPR006442:IPR003756; KEGG: sun:SUN_1366 prevent-host-death protein; PFAM: protein of unknown function DUF172; SPTR: A6QA10 Prevent-host-death protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_003655069.1	COGs: COG0177 EndoIII-related endonuclease; InterPro IPR005759:IPR003265:IPR003651:IPR011257; KEGG: abu:Abu_0623 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; SPTR: A8ESG4 Endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: endonuclease III
YP_003655070.1	KEGG: abu:Abu_0624 hypothetical protein; SPTR: A8ESG5 Putative uncharacterized protein
YP_003655071.1	KEGG: Ras GTPase-activating protein; SPTR: C4LW12 Ras GTPase-activating protein, putative
YP_003655072.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: abu:Abu_0625 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8ESG6 TonB-dependent receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor
YP_003655073.1	COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR009081:IPR012910:IPR000531; KEGG: abu:Abu_0625 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8ESG6 TonB-dependent receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor
YP_003655074.1	COGs: COG1896 hydrolase of HD superfamily; KEGG: abu:Abu_0634 hypothetical protein; SPTR: A8ESH5 Putative uncharacterized protein
YP_003655076.1	COGs: COG4866 conserved hypothetical protein; InterPro IPR016732; KEGG: wsu:WS0069 hypothetical protein; PFAM: Uncharacterised conserved protein UCP018688; SPTR: Q7MSV6 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2156)
YP_003655077.1	InterPro IPR000182:IPR016181; KEGG: tdn:Suden_1201 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Q30RA2 SSU ribosomal protein S18P alanine acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_003655078.1	COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: abu:Abu_0635 ribose-5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: A8ESH6 Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_003655079.1	COGs: COG0681 Signal peptidase I; InterProIPR019759:IPR011056:IPR000223:IPR019758:IPR 015927; KEGG: abu:Abu_0636 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: A8ESH7 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_003655080.1	COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterProIPR020630:IPR020631:IPR016040:IPR000672:IPR 016160; KEGG: abu:Abu_0637 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: A8ESH8 Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_003655081.1	InterPro IPR009056; KEGG: abu:Abu_0862 hypothetical protein; SPTR: A8ET48 Putative uncharacterized protein
YP_003655082.1	COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); InterProIPR020055:IPR020056:IPR020057:IPR011035:IPR 001021; KEGG: abu:Abu_0638 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25-like; SPTR: A8ESH9 50S ribosomal protein L25; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_003655083.1	COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328:IPR018171; KEGG: abu:Abu_0639 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: A8ESI0 Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_003655084.1	COGs: COG0795 permease; InterPro IPR005495:IPR000102; KEGG: abu:Abu_0640 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: A8ESI1 Conserved hypothetical membrane protein; PFAM: Predicted permease YjgP/YjgQ family
YP_003655085.1	InterPro IPR000086:IPR020084:IPR015797; KEGG: abu:Abu_0641 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: A8ESI2 Putative uncharacterized protein; PFAM: NUDIX domain
YP_003655086.1	COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: abu:Abu_0642 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; PRIAM: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SPTR: A8ESI3 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase
YP_003655087.1	COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136:IPR013785; KEGG: abu:Abu_0643 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase NPD; SPTR: A8ESI4 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase
YP_003655088.1	COGs: COG0162 Tyrosyl-tRNA synthetase; InterProIPR002305:IPR002942:IPR014729:IPR002307:IPR 001412; KEGG: abu:Abu_0644 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; PRIAM: Tyrosine--tRNA ligase; SMART: RNA-binding S4 domain protein; SPTR: A8ESI5 Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_003655089.1	COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR006674:IPR007685:IPR004095:IPR003607:IPR 012676:IPR004811; KEGG: abu:Abu_0645 bifunctional ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: A8ESI6 Bifunctional ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_003655090.1	InterPro IPR006110:IPR003716; KEGG: abu:Abu_0646 DNA-directed RNA polymerase, omega chain; PFAM: RNA polymerase Rpb6; SPTR: A8ESI7 DNA-directed RNA polymerase, omega chain; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_003655091.1	COGs: COG0528 Uridylate kinase; InterPro IPR001048:IPR011817:IPR015963; KEGG: abu:Abu_0647 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: UMP kinase; SPTR: A8ESI8 Uridylate kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_003655092.1	KEGG: abu:Abu_0648 hypothetical protein; SPTR: A8ESI9 Putative uncharacterized protein
YP_003655093.1	COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: abu:Abu_0649 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: A8ESJ0 Pyridoxal phosphate biosynthetic protein A; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase
YP_003655094.1	COGs: COG0854 Pyridoxal phosphate biosynthesis protein; InterPro IPR004569:IPR013785; KEGG: abu:Abu_0650 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: A8ESJ1 Pyridoxine 5'-phosphate synthase; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase
YP_003655095.1	COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890:IPR005801:IPR019999; KEGG: abu:Abu_0651 anthranilate synthase, component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: A8ESJ2 Anthranilate synthase, component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme
YP_003655096.1	InterPro IPR007730; KEGG: abu:Abu_0652 hypothetical protein; PFAM: Sporulation domain protein; SPTR: A8ESJ3 Putative uncharacterized protein; PFAM: Sporulation related domain
YP_003655097.1	COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085:IPR015421:IPR019798:IPR015424; KEGG: abu:Abu_1460 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: A8EUU1 Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_003655098.1	COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR004365:IPR004364:IPR012340:IPR018149:IPR 016027:IPR002313:IPR006195; KEGG: abu:Abu_0654 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: A8ESJ5 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_003655099.1	COGs: COG1286 membrane protein required for colicin V production; InterPro IPR003825; KEGG: abu:Abu_0655 colicin V production protein; PFAM: Colicin V production protein; SPTR: A8ESJ6 Colicin V production protein; PFAM: Colicin V production protein
YP_003655100.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR018247:IPR005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B6BHU8 Diguanylate cyclase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003655101.1	COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR004588:IPR016425:IPR011005; KEGG: abu:Abu_0656 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein; PRIAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; SPTR: A8ESJ7 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_003655102.1	COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR002938:IPR003042:IPR011777; KEGG: sun:SUN_1446 geranylgeranyl hydrogenase; PFAM: monooxygenase FAD-binding; SPTR: A6QA88 Geranylgeranyl hydrogenase; TIGRFAM: geranylgeranyl reductase; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase; geranylgeranyl reductase family
YP_003655103.1	COGs: COG0305 Replicative DNA helicase; InterPro IPR007693:IPR007694:IPR016136:IPR007692; KEGG: abu:Abu_0658 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SPTR: A8ESJ9 Replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_003655104.1	COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760:IPR020583:IPR006240; KEGG: tdn:Suden_0646 3(2),5 -bisphosphate nucleotidase; PFAM: inositol monophosphatase; SPTR: Q4HEK4 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial
YP_003655105.1	KEGG: ATPase; SPTR: B6BIM1 Putative uncharacterized protein
YP_003655106.1	InterPro IPR012902:IPR000983; KEGG: abu:Abu_0697 hypothetical protein; SPTR: A8ESN8 Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_003655107.1	COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR013954:IPR004446:IPR006543:IPR006549; KEGG: tdn:Suden_0574 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; PFAM: Polynucleotide kinase 3 phosphatase central region; PRIAM: Histidinol-phosphatase; SPTR: Q30T28 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase
YP_003655108.1	COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310:IPR012340:IPR016059:IPR016027; KEGG: abu:Abu_0698 DNA ligase; PFAM: ATP dependent DNA ligase; PRIAM: DNA ligase (ATP); SPTR: A8ESN9 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase domain
YP_003655109.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040:IPR011912; KEGG: abu:Abu_1796 ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8EVR3 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase
YP_003655110.1	COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterProIPR011611:IPR004820:IPR014729:IPR011913:IPR 011914:IPR004821; KEGG: abu:Abu_1797 ADP-heptose synthase; PFAM: PfkB domain protein; cytidylyltransferase; SPTR: A8EVR4 Bifunctional protein hldE; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain
YP_003655111.1	COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347:IPR004515; KEGG: abu:Abu_1798 phosphoheptose isomerase; PFAM: sugar isomerase (SIS); SPTR: A8EVR5 Phosphoheptose isomerase; TIGRFAM: phosphoheptose isomerase; PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase
YP_003655112.1	COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836:IPR005764; KEGG: nis:NIS_0707 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Adenine phosphoribosyltransferase; SPTR: A6Q2W2 Adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_003655113.1	COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR001926:IPR006653:IPR006654; KEGG: abu:Abu_0700 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8ESP1 Tryptophan synthase, beta chain; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_003655114.1	COGs: COG0586 membrane-associated protein; KEGG: abu:Abu_0701 hypothetical protein; SPTR: A8ESP2 Conserved hypothetical membrane protein; PFAM: SNARE associated Golgi protein
YP_003655115.1	COGs: COG0260 Leucyl aminopeptidase; InterPro IPR008283:IPR000819; KEGG: abu:Abu_0702 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; PRIAM: Leucyl aminopeptidase; SPTR: A8ESP3 Aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_003655116.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013785; KEGG: abu:Abu_1489 HMGL family protein; PFAM: pyruvate carboxyltransferase; SPTR: A8EUX0 HMGL family protein; PFAM: HMGL-like
YP_003655117.1	KEGG: abu:Abu_1491 hypothetical protein; SPTR: A8EUX2 Putative uncharacterized protein; PFAM: DoxX
YP_003655118.1	COGs: COG0787 Alanine racemase; InterProIPR001608:IPR011079:IPR000821:IPR020622:IPR 009006; KEGG: aoe:Clos_2275 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: A8MJ26 Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_003655119.1	COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076:IPR000447; KEGG: hps:HPSH_04965 D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: B2UU91 D-Amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_003655120.1	COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175:IPR013813:IPR019897:IPR006056; KEGG: hpp:HPP12_0941 translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: B6JMG5 Translation initiation inhibitor; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_003655121.1	COGs: COG2964 conserved hypothetical protein; InterPro IPR013559; KEGG: ckr:CKR_0542 hypothetical protein; PFAM: YheO domain protein; SPTR: B9DZB8 Putative uncharacterized protein; PFAM: YheO-like PAS domain
YP_003655122.1	COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dde:Dde_1548 TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: Q311Q1 TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_003655123.1	COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: dde:Dde_1549 TRAP-type C4-dicarboxylate transport system small permease component-like; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Q311Q0 TRAP-type C4-dicarboxylate transport system small permease component-like; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_003655124.1	COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: dde:Dde_1550 TRAP dicarboxylate transporter-DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q311P9 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_003655125.1	COGs: COG2173 D-alanyl-D-alanine dipeptidase; InterPro IPR000755:IPR009045; KEGG: dde:Dde_1551 D-alanyl-D-alanine dipeptidase; PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; SPTR: Q311P8 D-alanyl-D-alanine dipeptidase; PFAM: D-ala-D-ala dipeptidase
YP_003655126.1	Contains Selenocysteine; InterPro IPR011893; KEGG: amt:Amet_3680 putative selenoprotein; SPTR: C5SY02 Conserved hypothetical selenoprotein; TIGRFAM: conserved hypothetical protein; PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain
YP_003655127.1	InterPro IPR011576:IPR009002; KEGG: hch:HCH_03205 signal transduction histidine kinase, nitrogen specific; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: A4TXG4 Pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase
YP_003655128.1	InterPro IPR013838:IPR013026; KEGG: pgn:PGN_1340 hypothetical protein; SPTR: B2RKG4 Putative uncharacterized protein; PFAM: Sir2 family
YP_003655129.1	InterPro IPR001440:IPR019734:IPR011990:IPR013026; KEGG: shm:Shewmr7_0048 tetratricopeptide domain-containing protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: C9LJQ0 Putative tetratricopeptide repeat-containing domain protein
YP_003655130.1	COGs: COG2258 conserved hypothetical protein; InterPro IPR005302:IPR011037; KEGG: azc:AZC_2787 MOSC domain-containing protein; PFAM: MOSC domain containing protein; SPTR: B9ZEJ3 MOSC domain containing protein; PFAM: MOSC domain
YP_003655131.1	COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR015422:IPR015424; KEGG: tdn:Suden_0816 cysteine sulfinate desulfinase/cysteine desulfurase; SPTR: Q30SD6 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes-like protein
YP_003655132.1	KEGG: nam:NAMH_1294 ModE repressor domain protein; SPTR: B6BLJ4 ModE repressor domain protein
YP_003655133.1	COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; InterPro IPR003786; KEGG: tdn:Suden_0817 formate dehydrogenase accessory protein; PFAM: formate dehydrogenase subunit FdhD; SPTR: Q30SD5 Formate dehydrogenase, subunit FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_003655134.1	InterPro IPR016174; KEGG: abu:Abu_1496 putative FdhC protein; SPTR: A8EUX7 Putative FdhC protein; PFAM: Prokaryotic cytochrome b561
YP_003655135.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR000813:IPR017900:IPR017896; KEGG: abu:Abu_1510 formate dehydrogenase, iron-sulfur subunit FdhB; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EUX8 Formate dehydrogenase, iron-sulfur subunit FdhB; PFAM: 4Fe-4S binding domain
YP_003655136.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR009010; KEGG: tdn:Suden_0820 formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: Q30SD2 Formate dehydrogenase alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain
YP_003655137.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006963:IPR006656:IPR006655:IPR006311:IPR 017909; KEGG: abu:Abu_1498 formate dehydrogenase, large subunit FdhA; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: A8EUX9 Formate dehydrogenase, large subunit FdhA; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain
YP_003655138.1	InterPro IPR002173:IPR006311:IPR017909; KEGG: abu:Abu_1512 formate dehydrogenase subunit E, putative; SPTR: A8EUZ3 Formate dehydrogenase subunit E, putative; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003655139.1	KEGG: abu:Abu_1500 hypothetical protein; SPTR: A8EUY1 Putative uncharacterized protein; PFAM: Nitrate reductase delta subunit
YP_003655140.1	InterPro IPR001450:IPR017900:IPR017896; KEGG: tdn:Suden_0824 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B6BLI6 4Fe-4S ferredoxin, iron-sulfur binding
YP_003655141.1	COGs: COG2864 Cytochrome b subunit of formate dehydrogenase; InterPro IPR016174:IPR006471; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit; SPTR: B6BLJ2 Formate dehydrogenase, gamma subunit; TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit
YP_003655142.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR017900:IPR017896; KEGG: dps:DP2987 formate dehydrogenase, iron-sulfur chain; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q6AIW4 Probable formate dehydrogenase, iron-sulfur chain; PFAM: 4Fe-4S binding domain
YP_003655143.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR009010; KEGG: dps:DP2986 formate dehydrogenase, chain A; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: Q6AIW5 Probable formate dehydrogenase, chain A; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain
YP_003655144.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006311:IPR017909; KEGG: dps:DP2986 formate dehydrogenase, chain A; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; SPTR: Q6AIW5 Probable formate dehydrogenase, chain A; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003655145.1	InterPro IPR017909; KEGG: dps:DP2985 hypothetical protein; SPTR: C2A0J6 Putative uncharacterized protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003655146.1	KEGG: dps:DP2984 hypothetical protein; SPTR: Q6AIW7 Putative uncharacterized protein; PFAM: Nitrate reductase delta subunit
YP_003655148.1	COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: abu:Abu_1502 leucine/isoleucine/valine-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: A8EUY3 Leucine/isoleucine/valine-binding protein; PFAM: Receptor family ligand binding region
YP_003655149.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR004358:IPR005467; KEGG: abu:Abu_1503 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EUY4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003655150.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1504 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EUY5 Two-component response regulator; PFAM: Response regulator receiver domain; Firmicute plasmid replication protein (RepL)
YP_003655151.1	InterPro IPR006121; KEGG: abu:Abu_1506 heavy-metal transporting ATPase; PFAM: Heavy metal transport/detoxification protein; SPTR: A8EUY7 Heavy-metal transporting ATPase; PFAM: Heavy-metal-associated domain
YP_003655152.1	KEGG: abu:Abu_1507 heavy-metal transport protein; SPTR: A8EUY8 Heavy-metal transport protein
YP_003655153.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931:IPR006311; KEGG: abu:Abu_1508 transglutaminase family protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: A8EUY9 Transglutaminase family protein; PFAM: Transglutaminase-like superfamily
YP_003655154.1	KEGG: nam:NAMH_1292 hypothetical protein; SPTR: B9L5P7 Putative uncharacterized protein; TIGRFAM: selenium metabolism protein YedF
YP_003655155.1	COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR002731:IPR008275; KEGG: wsu:WS0738 hydroxy-dehydratase activator; PFAM: ATPase BadF/BadG/BcrA/BcrD type; PRIAM: Benzoyl-CoA reductase; SPTR: C2A0Q0 CoA-substrate-specific enzyme activase, putative; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative
YP_003655156.1	COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: wsu:WS0739 hypothetical protein; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: C2A0P9 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_003655157.1	COGs: COG0709 Selenophosphate synthase; InterPro IPR000728:IPR010918:IPR004536:IPR016188; KEGG: tdn:Suden_0830 selenophosphate synthase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; SPTR: B6BLH9 Selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein
YP_003655158.1	COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR018319:IPR015424:IPR004534; KEGG: abu:Abu_1524 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase; PRIAM: L-seryl-tRNA(Sec) selenium transferase; SPTR: A8EV04 L-seryl-tRNA(Sec) selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase
YP_003655159.1	COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR000795:IPR004161:IPR011991:IPR009000:IPR 005225:IPR004535; KEGG: abu:Abu_1525 selenocysteine-specific elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; SPTR: A8EV05 Selenocysteine-specific elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU
YP_003655160.1	KEGG: lbf:LBF_2597 methyltransferase/methylase; SPTR: A3J7I4 N-terminal Zn-ribbon domain fused to SAM-dependent methyltransferase
YP_003655161.1	KEGG: hypothetical protein; SPTR: C3GW83 YfiN1
YP_003655162.1	KEGG: conserved hypothetical protein; SPTR: A8GP11 Large extracellular alpha-helical protein
YP_003655163.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104:IPR013762:IPR011010; KEGG: tdn:Suden_0938 phage integrase; PFAM: integrase family protein; SPTR: B6BNI8 Phage integrase; PFAM: Domain of unknown function (DUF3596); Phage integrase family
YP_003655164.1	KEGG: oih:OB3324 hypothetical protein; SPTR: B6BNI7 Putative uncharacterized protein
YP_003655165.1	KEGG: sun:SUN_1440 hypothetical protein; SPTR: B6BNI6 Putative uncharacterized protein; PFAM: Replication initiation factor
YP_003655166.1	KEGG: sun:SUN_1441 hypothetical protein; SPTR: B6BNI2 Putative uncharacterized protein
YP_003655167.1	KEGG: hypothetical protein; SPTR: Q7RA63 Arabidopsis thaliana At1g71270/F3I17_8
YP_003655168.1	COGs: COG4928 P-loop ATPase; InterPro IPR011646; KEGG: bcl:ABC4089 hypothetical protein; PFAM: KAP P-loop domain protein; SPTR: C3F5H6 Putative uncharacterized protein; PFAM: KAP family P-loop domain
YP_003655169.1	KEGG: bcl:ABC4088 hypothetical protein; SPTR: Q5WAJ1 Putative uncharacterized protein
YP_003655170.1	KEGG: bcl:ABC4087 hypothetical protein; SPTR: Q5WAJ2 Putative uncharacterized protein
YP_003655171.1	COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR012278:IPR018228; KEGG: lmo:lmo0313 hypothetical protein; PFAM: TatD-related deoxyribonuclease; SPTR: B7BEN7 Putative uncharacterized protein; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_003655172.1	KEGG: cla:Cla_0876 hypothetical protein; SPTR: B9KCB3 Putative uncharacterized protein
YP_003655173.1	KEGG: hypothetical protein; SPTR: Q55G63 Putative uncharacterized protein
YP_003655174.1	InterPro IPR011335; KEGG: cjd:JJD26997_0356 hypothetical protein; SPTR: A6DAN5 Putative uncharacterized protein; PFAM: Restriction endonuclease
YP_003655175.1	COGs: COG2958 conserved hypothetical protein; InterPro IPR007468; KEGG: sun:SUN_1161 hypothetical protein; PFAM: protein of unknown function DUF511; SPTR: A6Q9F7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF511)
YP_003655176.1	COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: mac:MA0102 nucleotidyltransferase; PFAM: DNA polymerase beta domain protein region; SPTR: Q8TUG5 Nucleotidyltransferase; PFAM: Nucleotidyltransferase domain
YP_003655177.1	COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: mac:MA0101 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: Q8TUG6 UPF0331 protein MA_0101; PFAM: Protein of unknown function DUF86
YP_003655178.1	InterPro IPR012577; KEGG: bbt:BBta_5103 hypothetical protein; PFAM: NIPSNAP family containing protein; SPTR: A5ELQ7 Putative uncharacterized protein; PFAM: NIPSNAP
YP_003655179.1	KEGG: hypothetical protein; SPTR: Q09F58 Heme maturase
YP_003655180.1	KEGG: hypothetical protein; SPTR: Q5CFB0 Putative uncharacterized protein
YP_003655181.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR010499:IPR018060:IPR012287:IPR 020449:IPR018062:IPR011256:IPR009057; KEGG: vsa:VSAL_II0077 HTH-type transcriptional regulator, AraC-family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C2A189 DNA gyrase inhibitor; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003655182.1	KEGG: hypothetical protein similar to tRNA-pseudouridine synthase I; SPTR: A9DS70 Protein containing StAR-related lipid-transfer (START) domain
YP_003655183.1	KEGG: ttu:TERTU_1117 hypothetical protein; SPTR: C1ZX43 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2721)
YP_003655184.1	COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR000559:IPR020628; KEGG: mca:MCA2219 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Q605Q9 Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase
YP_003655185.1	COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR006059:IPR005673; KEGG: nam:NAMH_0308 phosphate ABC transporter, phosphate-binding protein PstS; PFAM: extracellular solute-binding protein family 1; SPTR: B9L7X3 Phosphate ABC transporter, phosphate-binding protein PstS; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_003655186.1	COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR011864; KEGG: nam:NAMH_0309 phosphate ABC transporter, permease protein PstC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6DAS3 Phosphate ABC transporter, permease protein PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_003655187.1	COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: sun:SUN_2270 phosphate ABC transporter, permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6QCK1 Phosphate ABC transporter, permease; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_003655188.1	COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR003439:IPR003593:IPR017871:IPR018087:IPR 005670:IPR015850; KEGG: nam:NAMH_0311 phosphate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9L7X6 Phosphate ABC transporter, ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_003655189.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: abu:Abu_1537 putative FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: A8EV13 Putative FMN reductase; PFAM: NADPH-dependent FMN reductase
YP_003655190.1	COGs: COG0679 permease; InterPro IPR004776; KEGG: abu:Abu_1056 auxin efflux carrier protein; PFAM: Auxin Efflux Carrier; SPTR: A8ETP2 Auxin efflux carrier protein; PFAM: Membrane transport protein
YP_003655191.1	COGs: COG2071 glutamine amidotransferase; InterPro IPR011697:IPR017926; KEGG: nis:NIS_1377 glutamine amidotransferase, class I; PFAM: peptidase C26; SPTR: Q1N2L9 Predicted glutamine amidotransferase; PFAM: Peptidase C26
YP_003655192.1	KEGG: pin:Ping_2672 hypothetical protein; SPTR: A1SY20 Putative uncharacterized protein; PFAM: Putative amidoligase enzyme
YP_003655193.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013163:IPR003594:IPR004358:IPR009082:IPR 005467; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV12 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003655194.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: dze:Dd1591_0809 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; PRIAM: Glucarate dehydratase; SPTR: C8QLC1 Glucarate dehydratase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: glucarate dehydratase
YP_003655195.1	COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR013785; KEGG: bld:BLi03503 hypothetical protein; PFAM: dihydrodipicolinate synthetase; PRIAM: Dihydrodipicolinate synthase; SPTR: C9BB04 Dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_003655196.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterProIPR006115:IPR016040:IPR013328:IPR006183:IPR 002204:IPR008927:IPR006398; KEGG: dze:Dd1591_0811 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: C6CLQ3 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase
YP_003655197.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR016040; KEGG: bpe:BP3543 putative D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: Q7VTJ3 Putative D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_003655198.1	COGs: COG1929 Glycerate kinase; InterPro IPR004381:IPR018193; KEGG: pwa:Pecwa_3551 glycerate kinase; PFAM: glycerate kinase; PRIAM: Glycerate kinase; SPTR: C6NEC2 Glycerate kinase; TIGRFAM: glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase
YP_003655199.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR001638; KEGG: oih:OB2837 hypothetical protein; PFAM: extracellular solute-binding protein family 3; SPTR: C0WAH6 Predicted protein
YP_003655200.1	KEGG: msu:MS0071 hypothetical protein; SPTR: C0WAH5 Predicted protein
YP_003655201.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: oih:OB2838 hypothetical protein; PFAM: protein of unknown function DUF112 transmembrane; SPTR: C5EVR5 Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctA family
YP_003655202.1	COGs: COG2721 Altronate dehydratase; InterPro IPR013974:IPR007392:IPR017654; KEGG: rpf:Rpic12D_4582 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; PRIAM: Galactarate dehydratase; SPTR: B5SCJ9 D-galactarate dehydratase (D-galactarate dehydrogenase) protein; TIGRFAM: galactarate dehydratase; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase
YP_003655203.1	InterPro IPR006016:IPR014729:IPR006015; KEGG: cff:CFF8240_1256 hypothetical protein; PFAM: UspA domain protein; SPTR: A0RQC9 Putative uncharacterized protein; PFAM: Universal stress protein family
YP_003655204.1	COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: rlt:Rleg2_5406 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: B6A1V2 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003655205.1	COGs: COG0469 Pyruvate kinase; InterProIPR015793:IPR015794:IPR015813:IPR015795:IPR 011037:IPR001697; KEGG: abu:Abu_0258 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: A8ERF9 Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_003655206.1	KEGG: tdn:Suden_1830 hypothetical protein; SPTR: Q30PH7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541)
YP_003655207.1	InterPro IPR014955; KEGG: vsp:VS_1733 hypothetical protein; PFAM: Protein of unknown function DUF1826; SPTR: Q1YPX1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1826)
YP_003655208.1	KEGG: DNA double-strand break repair Rad50 ATPase); K10866 DNA repair protein RAD50; SPTR: B0E7F9 DNA double-strand break repair Rad50 ATPase, putative
YP_003655209.1	KEGG: abu:Abu_0122 hypothetical protein; SPTR: A8ER33 Putative uncharacterized protein; PFAM: Uncharacterized protein containing a Zn-ribbon (DUF2116)
YP_003655210.1	COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: abu:Abu_2116 DnaK suppressor protein DksA; PFAM: zinc finger DksA/TraR C4-type; SPTR: A8EWK7 DnaK suppressor protein DksA; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_003655211.1	COGs: COG0807 GTP cyclohydrolase II; InterPro IPR002496:IPR000926; KEGG: abu:Abu_1237 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase., GTP cyclohydrolase II; SPTR: A8EU70 GTP cyclohydrolase-2; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: GTP cyclohydrolase II
YP_003655212.1	COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893:IPR017508; KEGG: glo:Glov_3688 HipA N-terminal domain protein; PFAM: HipA domain protein; SPTR: B3EBV5 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain
YP_003655213.1	InterPro IPR001387:IPR010982; KEGG: gem:GM21_0820 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A3J9R8 Transcriptional regulator, XRE family protein; PFAM: Helix-turn-helix
YP_003655214.1	KEGG: sun:SUN_2452 phage integrase family site specific recombinase; SPTR: A6QD27 Site-specific recombinase, phage integrase family
YP_003655215.1	COGs: COG0012 GTPase probable translation factor; InterProIPR002917:IPR013029:IPR004396:IPR012675:IPR 006073:IPR012676; KEGG: abu:Abu_0733 GTP-binding protein, putative; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related; SPTR: A8ESS4 GTP-binding protein, putative; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_003655216.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013163:IPR003594:IPR004358:IPR009082:IPR 005467; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV12 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003655217.1	InterPro IPR002545:IPR019825; KEGG: abu:Abu_0777 CheW-like chemotaxis protein; SMART: CheW domain protein; SPTR: A8ESW8 CheW-like chemotaxis protein; PFAM: CheW-like domain
YP_003655218.1	KEGG: abu:Abu_0735 putative recombination protein RecO; SPTR: A8ESS6 Putative uncharacterized protein
YP_003655219.1	KEGG: abu:Abu_0736 hypothetical protein; SPTR: A8ESS7 Putative uncharacterized protein
YP_003655220.1	COGs: COG3123 conserved hypothetical protein; InterPro IPR009664; KEGG: abu:Abu_0737 hypothetical protein; PFAM: protein of unknown function DUF1255; SPTR: A8ESS8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1255)
YP_003655221.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: abu:Abu_0792 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ESY3 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655222.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterProIPR001789:IPR003661:IPR003594:IPR011006:IPR 005467; KEGG: abu:Abu_0793 two component system histidine kinase/response regulator fusion protein; PFAM: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: A8ESY4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_003655223.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003661:IPR003594:IPR001789:IPR 004358:IPR011006:IPR009082:IPR005467; KEGG: abu:Abu_0794 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: A8ESY5 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_003655224.1	COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR017777; KEGG: abu:Abu_0799 UreA/short-chain amide ABC transporter, periplasmic UreA/short-chain amide-binding protein; SPTR: A8ESZ0 Urea/short-chain amide ABC transporter, periplasmic urea/short-chain amide-binding protein; TIGRFAM: urea ABC transporter, urea binding protein; TIGRFAM: urea ABC transporter, urea binding protein
YP_003655225.1	COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851:IPR017779; KEGG: abu:Abu_0800 UreA/short-chain amide ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: A8ESZ1 Urea/short-chain amide ABC transporter, permease protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB
YP_003655226.1	COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851:IPR002355:IPR017778; KEGG: abu:Abu_0801 ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: A8ESZ2 ABC transporter, permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC
YP_003655227.1	COGs: COG4674 Uncharacterized ABC-type transport system ATPase component; InterPro IPR003439:IPR017781; KEGG: abu:Abu_0802 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SPTR: A8ESZ3 ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD
YP_003655228.1	COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017780; KEGG: abu:Abu_0803 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ESZ4 ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE
YP_003655229.1	COGs: COG0829 Urease accessory protein UreH; InterPro IPR002669; KEGG: abu:Abu_0805 urease accessory protein UreD; PFAM: Urease accessory protein UreD; SPTR: A8ESZ6 Urease accessory protein ureD; PFAM: UreD urease accessory protein
YP_003655230.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: chl:Chy400_1879 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: B9LEU2 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_003655231.1	COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: ctc:CTC02162 metal dependent hydrolase; SPTR: C6PQN4 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_003655232.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: pin:Ping_2429 ABC transporter for histidine/lysine/arginine/ornithine ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C9PHF4 Putative amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_003655233.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: tau:Tola_1983 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C4L7G6 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003655234.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: pin:Ping_2431 ABC polar amino acid transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C9PHF2 ABC polar amino acid transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003655235.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: mms:mma_0036 ABC transporter substrate binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: A6STV0 ABC transporter substrate binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003655236.1	COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: psa:PST_3088 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: A4VP25 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003655237.1	COGs: COG4266 Allantoicase; InterPro IPR015908:IPR005164:IPR008979; KEGG: pfo:Pfl01_1704 allantoicase; PFAM: Allantoicase region; PRIAM: Allantoicase; SPTR: C8PUG8 Allantoicase; TIGRFAM: allantoicase; PFAM: Allantoicase repeat; TIGRFAM: allantoicase
YP_003655238.1	COGs: COG3194 Ureidoglycolate hydrolase; InterPro IPR007247; KEGG: pap:PSPA7_3821 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; PRIAM: Ureidoglycolate hydrolase; SPTR: A6CZ51 Ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase
YP_003655239.1	COGs: COG0832 Urea amidohydrolase (urease) beta subunit; InterPro IPR002026:IPR002019:IPR008223; KEGG: abu:Abu_0806 fusion of urease beta and gamma subunits; PFAM: Urease gamma subunit region; Urease beta subunit; PRIAM: Urease; SPTR: A8ESZ7 Fusion of urease beta and gamma subunits; TIGRFAM: urease, gamma subunit; urease, beta subunit; PFAM: Urease beta subunit; Urease, gamma subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit
YP_003655240.1	COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; InterProIPR011612:IPR006680:IPR017952:IPR017950:IPR 011059:IPR005848:IPR017951; KEGG: abu:Abu_0807 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein; PRIAM: Urease; SPTR: A8ESZ8 Urease subunit beta; TIGRFAM: urease, alpha subunit; PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit
YP_003655241.1	COGs: COG2371 Urease accessory protein UreE; InterPro IPR007864; KEGG: abu:Abu_0808 urease accessory protein; PFAM: UreE urease accessory domain protein; SPTR: A8ESZ9 Urease accessory protein ureE; PFAM: UreE urease accessory protein, C-terminal domain
YP_003655242.1	COGs: COG0830 Urease accessory protein UreF; KEGG: abu:Abu_0809 urease complex component; SPTR: A8ET00 Urease complex component; PFAM: UreF
YP_003655243.1	COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR003495:IPR012202:IPR004400; KEGG: abu:Abu_0810 urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; SPTR: A8ET01 Urease accessory protein ureG; TIGRFAM: urease accessory protein UreG; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG
YP_003655244.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400:IPR000871; KEGG: abu:Abu_0380 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ERT1 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR
YP_003655245.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: abu:Abu_0381 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8ERT2 Biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family
YP_003655246.1	COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: abu:Abu_0703 TonB-dependent receptor protein; PFAM: Gram-negative tonB protein; SPTR: A8ESP4 TonB-dependent receptor protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_003655247.1	COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR000728:IPR016188; KEGG: abu:Abu_0740 thiamine monophosphate kinase; PFAM: AIR synthase related protein; SPTR: A8EST1 Thiamine monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase
YP_003655248.1	COGs: COG0585 conserved hypothetical protein; InterPro IPR001656:IPR020103:IPR011760; KEGG: abu:Abu_0741 tRNA pseudouridine synthase D; PFAM: tRNA pseudouridine synthase D TruD; SPTR: A8EST2 tRNA pseudouridine synthase D; PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: conserved hypothetical protein TIGR00094
YP_003655249.1	KEGG: abu:Abu_0742 hypothetical protein; SPTR: A8EST3 Putative uncharacterized protein
YP_003655250.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004090; KEGG: abu:Abu_0743 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EST4 Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Protein of unknown function (DUF3365)
YP_003655251.1	COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterProIPR013849:IPR011114:IPR003583:IPR012340:IPR 010994:IPR016027:IPR000085; KEGG: abu:Abu_0744 Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SPTR: A8EST5 Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_003655252.1	COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterProIPR011127:IPR011095:IPR013817:IPR013816:IPR 000291:IPR016185:IPR005905:IPR011761; KEGG: abu:Abu_0745 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: A8EST6 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_003655253.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: abu:Abu_0746 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: A8EST7 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; PFAM: alpha/beta hydrolase fold
YP_003655254.1	COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR013221:IPR004101; KEGG: abu:Abu_0747 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8EST8 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; PFAM: Mur ligase middle domain
YP_003655255.1	InterPro IPR012657; KEGG: coc:Coch_0989 hypothetical protein; SPTR: C3QEB2 Putative uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436
YP_003655256.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011151:IPR011146; KEGG: abu:Abu_0748 HIT family protein; PFAM: histidine triad (HIT) protein; SPTR: A8EST9 HIT family protein; PFAM: HIT domain
YP_003655257.1	KEGG: hypothetical protein similar to normocyte-binding protein 1; SPTR: Q8WRS5 Normocyte-binding protein 1
YP_003655258.1	COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175:IPR013813; KEGG: pzu:PHZ_c2373 translation initiation inhibitor, YjgF family; PFAM: Endoribonuclease L-PSP; SPTR: B4RFW9 Translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP
YP_003655259.1	COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: hpb:HELPY_0929 putative D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: C7BYZ0 Putative D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_003655260.1	COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR003607:IPR006261; KEGG: tdn:Suden_0745 deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PRIAM: dGTPase; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q30SK7 Deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_003655261.1	InterPro IPR001387:IPR010982; KEGG: cff:CFF8240_0305 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q4HG65 Helix-turn-helix domain protein; PFAM: Helix-turn-helix
YP_003655262.1	KEGG: tdn:Suden_0985 histidine kinase; SPTR: Q30RW8 Sensor protein
YP_003655263.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_0632 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESH3 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655264.1	InterPro IPR016181:IPR000182; KEGG: hypothetical protein; SPTR: Q1JYH4 Putative uncharacterized protein
YP_003655265.1	KEGG: abu:Abu_0736 hypothetical protein; SPTR: B6BJJ0 Putative uncharacterized protein
YP_003655266.1	KEGG: hypothetical protein; SPTR: Q8IDH7 Putative uncharacterized protein
YP_003655267.1	KEGG: son:SO_4391 hypothetical protein; SPTR: Q8E995 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2971)
YP_003655268.1	COGs: COG2932 transcriptional regulator protein; InterPro IPR019759:IPR011056:IPR015927; KEGG: abu:Abu_1647 hypothetical protein; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: A8EVC1 Putative uncharacterized protein; PFAM: Peptidase S24-like
YP_003655269.1	KEGG: shl:Shal_0526 hypothetical protein; SPTR: B0TRC9 Putative uncharacterized protein
YP_003655270.1	COGs: COG0051 Ribosomal protein S10; InterPro IPR001848:IPR018268:IPR005731; KEGG: abu:Abu_0751 30S ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: A8ESU2 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_003655271.1	COGs: COG0087 Ribosomal protein L3; InterPro IPR000597:IPR009000:IPR019927; KEGG: abu:Abu_0752 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: A8ESU3 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_003655272.1	COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: abu:Abu_0753 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: A8ESU4 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family
YP_003655273.1	COGs: COG0089 Ribosomal protein L23; InterPro IPR013025:IPR012677:IPR012678; KEGG: abu:Abu_0754 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: A8ESU5 50S ribosomal protein L23; PFAM: Ribosomal protein L23
YP_003655274.1	COGs: COG0090 Ribosomal protein L2; InterProIPR002171:IPR012340:IPR014722:IPR008991:IPR 016027:IPR005880; KEGG: abu:Abu_0755 50S ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: A8ESU6 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_003655275.1	COGs: COG0185 Ribosomal protein S19; InterPro IPR002222:IPR005732; KEGG: wsu:WS1712 30S ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: C3XK38 30s ribosomal subunit protein s19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_003655276.1	COGs: COG0091 Ribosomal protein L22; InterPro IPR001063:IPR018260:IPR005727; KEGG: abu:Abu_0757 50S ribosomal protein L22; PFAM: ribosomal protein L22/L17; SPTR: A8ESU8 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_003655277.1	COGs: COG0092 Ribosomal protein S3; InterProIPR008282:IPR004044:IPR001351:IPR004087:IPR 015946:IPR018280:IPR009019:IPR005704:IPR004088; KEGG: abu:Abu_0758 30S ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: A8ESU9 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_003655278.1	COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR016180:IPR000114:IPR020798; KEGG: abu:Abu_0759 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: A8ESV0 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_003655279.1	InterPro IPR001854:IPR018254; KEGG: abu:Abu_0760 50S ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: A8ESV1 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_003655280.1	COGs: COG0186 Ribosomal protein S17; InterProIPR000266:IPR012340:IPR019979:IPR016027:IPR 019984; KEGG: abu:Abu_0761 30S ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: A8ESV2 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_003655281.1	COGs: COG0093 Ribosomal protein L14; InterPro IPR000218:IPR019972:IPR005745; KEGG: abu:Abu_0762 50S ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; SPTR: A8ESV3 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_003655282.1	InterPro IPR005824:IPR005825:IPR008991:IPR003256; KEGG: abu:Abu_0763 50S ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; SPTR: A8ESV4 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_003655283.1	COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: abu:Abu_0764 50S ribosomal protein L5; PFAM: ribosomal protein L5; SPTR: A8ESV5 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_003655284.1	COGs: COG0199 Ribosomal protein S14; InterPro IPR001209:IPR018271; KEGG: abu:Abu_0765 30S ribosomal protein S14; PFAM: ribosomal protein S14; SPTR: A8ESV6 30S ribosomal protein S14 type Z; PFAM: Ribosomal protein S14p/S29e
YP_003655285.1	COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: abu:Abu_0766 30S ribosomal protein S8; PFAM: ribosomal protein S8; SPTR: A8ESV7 30S ribosomal protein S8; PFAM: Ribosomal protein S8
YP_003655286.1	COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040:IPR000702:IPR019906:IPR002358; KEGG: abu:Abu_0767 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: A8ESV8 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_003655287.1	COGs: COG0256 Ribosomal protein L18; InterPro IPR005484:IPR004389; KEGG: abu:Abu_0768 50S ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; SPTR: A8ESV9 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_003655288.1	COGs: COG0098 Ribosomal protein S5; InterProIPR013810:IPR005324:IPR014720:IPR014721:IPR 018192:IPR020568:IPR005712; KEGG: abu:Abu_0769 30S ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; SPTR: A8ESW0 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_003655289.1	COGs: COG0200 Ribosomal protein L15; InterPro IPR001196:IPR005749; KEGG: abu:Abu_0770 50S ribosomal protein L15; PFAM: ribosomal protein L15; SPTR: A8ESW1 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_003655290.1	COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: abu:Abu_0771 preprotein translocase subunit SecY; PFAM: SecY protein; SPTR: A8ESW2 Preprotein translocase secY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_003655291.1	COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994:IPR001714:IPR002467; KEGG: abu:Abu_0772 methionine aminopeptidase; PFAM: peptidase M24; PRIAM: Methionyl aminopeptidase; SPTR: A8ESW3 Methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_003655292.1	COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR006196:IPR012340:IPR016027:IPR004368; KEGG: abu:Abu_0773 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: A8ESW4 Translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_003655293.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_0615 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8ESF6 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655294.1	KEGG: cce:Ccel_1845 hypothetical protein; SPTR: B8I350 Putative uncharacterized protein
YP_003655295.1	COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: abu:Abu_0774 hypothetical protein; PFAM: Uracil-DNA glycosylase superfamily; SPTR: A8ESW5 Putative uncharacterized protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_003655296.1	KEGG: abu:Abu_0775 hypothetical protein; SPTR: A8ESW6 Putative uncharacterized protein
YP_003655297.1	COGs: COG0173 Aspartyl-tRNA synthetase; InterProIPR004365:IPR004364:IPR004115:IPR012340:IPR 002312:IPR016027:IPR004524:IPR006195; KEGG: abu:Abu_0776 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: A8ESW7 Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_003655298.1	COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: abu:Abu_1739 putative cation ABC transporter, periplasmic-binding protein; PFAM: periplasmic solute binding protein; SPTR: A8EVL3 Putative cation ABC transporter, periplasmic-binding protein; PFAM: Periplasmic solute binding protein family
YP_003655299.1	COGs: COG1032 Fe-S oxidoreductase; InterPro IPR013704:IPR007197:IPR006638; KEGG: abu:Abu_0778 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B6BK38 Fe-S oxidoreductase; PFAM: Radical SAM superfamily; Radical SAM N-terminal
YP_003655300.1	COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850:IPR007862:IPR006259; KEGG: abu:Abu_0779 adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; SPTR: A8ESX0 Adenylate kinase; TIGRFAM: adenylate kinase; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases
YP_003655301.1	COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850; KEGG: abu:Abu_0780 adenylate kinase; PFAM: adenylate kinase; SPTR: A8ESX1 Adenylate kinase; PFAM: Adenylate kinase
YP_003655302.1	COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453; KEGG: abu:Abu_0781 molybdopterin binding domain-containing protein; PFAM: molybdopterin binding domain; SPTR: A8ESX2 Molybdopterin binding domain protein; PFAM: Probable molybdopterin binding domain
YP_003655303.1	COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597:IPR011990:IPR018130; KEGG: aas:Aasi_0852 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: C4IKZ6 Sel1 repeat family protein; PFAM: Sel1 repeat
YP_003655304.1	COGs: COG0787 Alanine racemase; InterProIPR001608:IPR011079:IPR000821:IPR020622:IPR 009006; KEGG: abu:Abu_0786 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: A8ESX7 Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_003655305.1	COGs: COG0322 Nuclease subunit of the excinuclease complex; InterProIPR000305:IPR001943:IPR001162:IPR010994:IPR 009055:IPR004791; KEGG: abu:Abu_0787 excinuclease ABC subunit C; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: A8ESX8 UvrABC system protein C; TIGRFAM: excinuclease ABC, C subunit; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit
YP_003655306.1	InterPro IPR014347; KEGG: glo:Glov_3708 tautomerase; SPTR: C1SN26 Tautomerase enzyme
YP_003655307.1	InterPro IPR007138:IPR011008; KEGG: tdn:Suden_1481 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: C2AA30 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides; PFAM: Antibiotic biosynthesis monooxygenase
YP_003655308.1	InterPro IPR001623; KEGG: abu:Abu_1033 DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8ETL9 DnaJ domain protein; PFAM: DnaJ domain
YP_003655309.1	COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: wsu:WS0108 GGDEF family protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: Q7MAP6 GGDEF FAMILY PROTEIN; PFAM: EAL domain; Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655310.1	InterPro IPR001623:IPR003095; KEGG: abu:Abu_1034 DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8ETM0 DnaJ domain protein; PFAM: DnaJ domain
YP_003655311.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: dat:HRM2_37860 DraG2; PFAM: ADP-ribosylation/Crystallin J1; SPTR: B6BNN6 ADP-ribosylation/Crystallin J1, putative; PFAM: ADP-ribosylglycohydrolase
YP_003655312.1	COGs: COG3531 protein-disulfide isomerase; InterPro IPR012336; KEGG: tdn:Suden_1963 DsbA oxidoreductase; SPTR: Q30P44 DSBA oxidoreductase; PFAM: DSBA-like thioredoxin domain
YP_003655313.1	KEGG: abu:Abu_0091 hypothetical protein; SPTR: A8ER02 Putative uncharacterized protein; PFAM: Phosphate-starvation-inducible E
YP_003655314.1	COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: nmr:Nmar_0201 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q0EXF5 Fe-S oxidoreductase; PFAM: Radical SAM superfamily
YP_003655315.1	KEGG: hypothetical protein LOC100009749; SPTR: A6PV85 Chromosome segregation ATPases-like protein (Fragment)
YP_003655316.1	InterPro IPR018873; KEGG: cbs:COXBURSA331_A1986 hypothetical protein; PFAM: KilA-N, DNA-binding domain; SPTR: C0GPK4 Putative uncharacterized protein; PFAM: ORF6N domain
YP_003655317.1	KEGG: ftn:FTN_0863 hypothetical protein; SPTR: A0Q686 Hypothetical membrane protein
YP_003655318.1	COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: abu:Abu_0821 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: A8ET12 Exodeoxyribonuclease; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_003655319.1	COGs: COG1225 Peroxiredoxin; InterPro IPR000866:IPR012335:IPR012336:IPR017936; KEGG: dsa:Desal_2200 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: B4VKQ6 Redoxin superfamily; PFAM: AhpC/TSA family
YP_003655320.1	InterPro IPR002781; KEGG: abu:Abu_0823 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: A8ET14 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE
YP_003655321.1	KEGG: abu:Abu_0822 hypothetical protein; SPTR: A8ET13 Putative uncharacterized protein
YP_003655322.1	COGs: COG0679 permease; InterPro IPR004776; KEGG: abu:Abu_0836 auxin efflux carrier protein, putative; PFAM: Auxin Efflux Carrier; SPTR: A8ET27 Auxin efflux carrier protein, putative; PFAM: Membrane transport protein
YP_003655323.1	COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: abu:Abu_1584 sodium:alanine symporter; PFAM: sodium:alanine symporter; SPTR: A8EV59 Sodium:alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003655324.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR004358:IPR005467; KEGG: abu:Abu_1583 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV58 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003655325.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011991:IPR011006; KEGG: abu:Abu_1582 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EV57 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655326.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR000160:IPR011006; KEGG: cyt:cce_4578 two-component response regulator; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: response regulator receiver; GGDEF domain containing protein; SPTR: A3IRP4 Response regulator receiver domain protein (CheY-like); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655327.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004010:IPR003661:IPR003594:IPR001789:IPR 004358:IPR011006:IPR009082:IPR008207:IPR005467; KEGG: wsu:WS0850 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Cache domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: Q7M9K6 Sensor protein; PFAM: Cache domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003655328.1	COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR015421:IPR015424; KEGG: ctc:CTC01478 putative histidine decarboxylase; SPTR: Q894Q7 Putative histidine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase conserved domain
YP_003655329.1	KEGG: abu:Abu_0950 hypothetical protein; SPTR: A8ETD6 Putative uncharacterized protein
YP_003655330.1	COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: dde:Dde_1618 flavodoxin-like fold domain-containing protein; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: C8QMT1 NAD(P)H dehydrogenase (Quinone); PFAM: Flavodoxin-like fold
YP_003655331.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR009594:IPR000005:IPR018060:IPR012287:IPR 020449:IPR018062:IPR009057; KEGG: dsa:Desal_2270 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C6BWP6 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus
YP_003655332.1	COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR003779; KEGG: bph:Bphy_0944 carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; SPTR: C6NV25 Carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase family
YP_003655333.1	COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: bur:Bcep18194_A5379 isochorismatase hydrolase/endoribonuclease L-PSP; PFAM: isochorismatase hydrolase; SPTR: Q39EZ3 Isochorismatase hydrolase/Endoribonuclease L-PSP; PFAM: Isochorismatase family
YP_003655334.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR018060:IPR012287:IPR018062:IPR 009057; KEGG: abu:Abu_2328 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EX63 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003655335.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR018060:IPR012287:IPR020449:IPR 009057; KEGG: fjo:Fjoh_1839 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A5FIU8 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003655336.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: npu:Npun_F6405 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C4D8N4 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003655337.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: npu:Npun_F6405 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: B2IY78 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_003655338.1	KEGG: pha:PSHAa2193 hypothetical protein; SPTR: Q1JYH7 Putative uncharacterized protein
YP_003655339.1	COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: tcx:Tcr_1884 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q31EE9 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003655340.1	COGs: COG2350 conserved hypothetical protein; InterPro IPR005545:IPR011008; KEGG: dps:DP2485 hypothetical protein; PFAM: YCII-related; SPTR: Q6AKB2 Putative uncharacterized protein; PFAM: YCII-related domain
YP_003655341.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: cts:Ctha_2428 NmrA family protein; PFAM: NmrA family protein; SPTR: B3QX67 NmrA family protein; PFAM: NmrA-like family
YP_003655342.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: abu:Abu_1144 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: A8ETY0 Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold
YP_003655343.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: abu:Abu_1145 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8ETY1 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003655344.1	InterPro IPR016040; KEGG: pin:Ping_3626 dTDP-glucose 4,6-dehydratase; SPTR: A1T0P4 dTDP-glucose 4,6-dehydratase
YP_003655345.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR018060:IPR012287:IPR020449:IPR 018062:IPR009057; KEGG: abu:Abu_2328 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EX63 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003655346.1	COGs: COG1881 Phospholipid-binding protein; InterPro IPR008914:IPR005247; KEGG: abu:Abu_1052 hypothetical protein; PFAM: PEBP family protein; SPTR: A8ETN8 Putative uncharacterized protein; PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481
YP_003655347.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: abu:Abu_2327 methyltransferase; PFAM: Methyltransferase type 11; SPTR: A8EX62 Methyltransferase; PFAM: Methyltransferase domain
YP_003655348.1	InterPro IPR006597:IPR009739; KEGG: lpp:lpp2502 hypothetical protein; PFAM: protein of unknown function DUF1311; Sel1 domain protein repeat-containing protein; SPTR: C9NSH3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1311)
YP_003655349.1	COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; KEGG: hhe:HH1514 hypothetical protein; SPTR: B6BHF2 Putative uncharacterized protein; PFAM: NMT1/THI5 like
YP_003655350.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006090:IPR013786:IPR006091:IPR 013764:IPR009100:IPR009075; KEGG: cha:CHAB381_1168 putative acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: B6BHF3 Putative acyl-coa dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_003655351.1	KEGG: hhe:HH1512 hypothetical protein; SPTR: B6BHF4 Putative uncharacterized protein
YP_003655352.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR018771:IPR003018:IPR000160:IPR000014; KEGG: mmw:Mmwyl1_0187 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; Transcriptional regulator, histidine kinase sensor-like; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; SPTR: A6VRQ0 Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Predicted histidine kinase sensor domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_003655353.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: rhi:NGR_b12930 putative ABC-type sugar transport system, periplasmic component; PFAM: extracellular solute-binding protein family 1; SPTR: C3KRN6 Putative ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein
YP_003655354.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013656:IPR003661:IPR003594:IPR009082:IPR 000014:IPR005467:IPR000700; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EV12 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003655355.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086:IPR020476:IPR020084:IPR015797; KEGG: abu:Abu_2020 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; SPTR: A8EWB4 MutT/nudix family protein; PFAM: NUDIX domain
YP_003655356.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016162:IPR016160:IPR016161; KEGG: cff:CFF8240_0070 aldehyde dehydrogenase A; PFAM: Aldehyde Dehydrogenase; SPTR: A0RM47 Aldehyde dehydrogenase A; PFAM: Aldehyde dehydrogenase family
YP_003655357.1	COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; InterPro IPR000534:IPR016040:IPR010136; KEGG: abu:Abu_0986 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: A8ETH2 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_003655358.1	InterPro IPR014710:IPR018490; KEGG: fjo:Fjoh_4303 cyclic nucleotide-binding protein; SPTR: A5FBV6 Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain
YP_003655359.1	InterPro IPR002790; KEGG: dat:HRM2_48560 hypothetical protein; PFAM: protein of unknown function DUF88; SPTR: C0QIG0 Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_003655360.1	COGs: COG0686 Alanine dehydrogenase; InterPro IPR007698:IPR016040; KEGG: ppr:PBPRB1416 hypothetical protein; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: Q6LHE7 Putative uncharacterized protein; PFAM: Alanine dehydrogenase/PNT, C-terminal domain
YP_003655361.1	COGs: COG4843 conserved hypothetical protein; InterPro IPR019264; KEGG: sde:Sde_0566 hypothetical protein; PFAM: Protein of unknown function DUF2179; SPTR: Q21N99 UPF0316 protein Sde_0566; PFAM: Uncharacterized protein conserved in bacteria (DUF2179)
YP_003655362.1	COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR016040; KEGG: mmw:Mmwyl1_1580 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: A6VVM9 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_003655363.1	InterPro IPR000620; KEGG: abu:Abu_1045 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8ETN1 Conserved hypothetical membrane protein (DUF6 domain protein); PFAM: EamA-like transporter family
YP_003655364.1	COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: abu:Abu_1053 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A8ETN9 Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003655365.1	COGs: COG2855 membrane protein; InterPro IPR018383:IPR004630; KEGG: abu:Abu_1054 putative integral membrane protein; PFAM: Uncharacterised protein family UPF0324; SPTR: A6DCS5 Putative uncharacterized protein; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein
YP_003655366.1	COGs: COG1027 Aspartate ammonia-lyase; InterProIPR000362:IPR018951:IPR003031:IPR020557:IPR 008948:IPR004708; KEGG: abu:Abu_1581 aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; SPTR: A8EV56 Aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase
YP_003655367.1	COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034; KEGG: abu:Abu_1580 putative asparaginase; SPTR: A8EV55 Putative uncharacterized protein; PFAM: Asparaginase
YP_003655368.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR013655:IPR003661:IPR003594:IPR000014:IPR 001610:IPR004358:IPR009082:IPR005467:IPR000700; KEGG: abu:Abu_0455 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A8ES06 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003655369.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: cff:CFF8240_0377 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1ZZ91 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655370.1	KEGG: tmz:Tmz1t_2865 hypothetical protein; SPTR: A3WKQ8 Putative uncharacterized protein
YP_003655371.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: hch:HCH_02930 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A3Y5B8 Transcriptional Regulator, TetR family protein; PFAM: Bacterial regulatory proteins, tetR family
YP_003655372.1	KEGG: bbe:BBR47_45440 hypothetical protein; SPTR: A3YF82 Chaperonin GroEL
YP_003655373.1	KEGG: cts:Ctha_0969 hypothetical protein; SPTR: B3QXG0 Putative uncharacterized protein
YP_003655374.1	COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: dat:HRM2_16150 putative TRAP-type transporter, periplasmic component (TAXI family protein); SPTR: A6FA62 Immunogenic protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_003655375.1	COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656:IPR018062:IPR011853; KEGG: mmw:Mmwyl1_3010 TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q2BHG2 Putative uncharacterized protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein
YP_003655376.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_0790 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESY1 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655377.1	InterPro IPR009501; KEGG: abu:Abu_1579 hypothetical protein; PFAM: protein of unknown function DUF1121; SPTR: A8EV54 Putative uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556
YP_003655378.1	COGs: COG0579 dehydrogenase; InterPro IPR006076; KEGG: hmo:HM1_1164 fad dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: B6BKG7 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_003655379.1	KEGG: tga:TGAM_0411 hypothetical protein; SPTR: C5A3V1 Putative uncharacterized protein; PFAM: Bacterial inner membrane protein
YP_003655380.1	COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933:IPR011650:IPR017439:IPR010168; KEGG: hna:Hneap_2199 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: Hippurate hydrolase; SPTR: Q1MYK3 Peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_003655381.1	COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: maq:Maqu_2141 proline racemase; PFAM: proline racemase; PRIAM: Proline racemase; SPTR: A3JC62 Putative proline racemase protein; PFAM: Proline racemase
YP_003655382.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR002364:IPR013154:IPR013149:IPR011032:IPR 016040; KEGG: maq:Maqu_2142 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: A1U2K2 Alcohol dehydrogenase, zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003655383.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016:IPR014729:IPR006015; KEGG: maq:Maqu_0351 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A6FPU3 Universal stress protein family protein; PFAM: Universal stress protein family
YP_003655384.1	COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: sil:SPO1145 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A9DXM3 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_003655385.1	COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: maq:Maqu_0353 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Q8VPB2 Small transmembrane protein; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_003655386.1	COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: maq:Maqu_0354 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A9DXL9 TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7
YP_003655387.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: csa:Csal_2732 peptidase M24; PFAM: creatinase; peptidase M24; SPTR: A4BIJ0 Peptidase, M24 family protein; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; TIGRFAM: ectoine utilization protein EutD
YP_003655388.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR015590:IPR016162:IPR016161; KEGG: bfa:Bfae_15470 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C7MCR9 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_003655389.1	COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814:IPR015421:IPR015424; KEGG: hna:Hneap_2200 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III; SPTR: B5JS30 Diaminobutyrate--2-oxoglutarate transaminase; PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase
YP_003655391.1	InterPro IPR011701:IPR016196; KEGG: slo:Shew_0674 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: B6R092 Permease, major facilitator superfamily; PFAM: Major Facilitator Superfamily
YP_003655392.1	COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR000412; KEGG: abu:Abu_1366 ABC transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: A8EUJ8 ABC transporter, permease protein; PFAM: ABC-2 type transporter
YP_003655393.1	COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR000412; KEGG: abu:Abu_1365 ABC transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: A8EUJ7 ABC transporter, permease protein; PFAM: ABC-2 type transporter
YP_003655394.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: abu:Abu_1364 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8EUJ6 ABC transporter, ATP-binding protein; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003655395.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: abu:Abu_1363 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: A8EUJ5 HlyD-family secretion protein; PFAM: HlyD family secretion protein
YP_003655396.1	COGs: COG1528 Ferritin-like protein; InterPro IPR008331:IPR009040:IPR012347:IPR009078; KEGG: gbm:Gbem_2519 Ferritin Dps family protein; PFAM: Ferritin Dps family protein; PRIAM: Ferroxidase; SPTR: B7RZV2 Ferritin-like domain subfamily protein; PFAM: Ferritin-like domain
YP_003655397.1	COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR001667:IPR004097; KEGG: abu:Abu_1578 putative manganese-dependent inorganic pyrophosphatase; PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; PRIAM: Inorganic diphosphatase; SPTR: A8EV53 Inorganic pyrophosphatase, manganese-dependent; PFAM: DHH family; DHHA2 domain
YP_003655398.1	COGs: COG0730 permease; InterPro IPR002781; KEGG: vsa:VSAL_I1303 membrane protein; PFAM: protein of unknown function DUF81; SPTR: C5S2J5 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE
YP_003655399.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR018062:IPR000005:IPR012287:IPR 009057; KEGG: abu:Abu_1571 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EV46 Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003655400.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034:IPR000891:IPR013785; KEGG: abu:Abu_1570 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; SPTR: A8EV45 2-isopropylmalate synthase; PFAM: HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type
YP_003655401.1	KEGG: fjo:Fjoh_3633 hypothetical protein; SPTR: A5FDR4 Putative uncharacterized protein
YP_003655402.1	COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: pdi:BDI_1404 hypothetical protein; PFAM: DNA polymerase beta domain protein region; SPTR: Q1PZ56 Putative uncharacterized protein; PFAM: Nucleotidyltransferase domain
YP_003655403.1	COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: nis:NIS_0575 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: C2A3K3 Uncharacterized conserved protein; PFAM: Protein of unknown function DUF86
YP_003655404.1	COGs: COG4335 DNA alkylation repair protein; KEGG: abu:Abu_1559 putative DNA alkylation repair enzyme; SPTR: A8EV34 Putative DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme
YP_003655405.1	COGs: COG2606 conserved hypothetical protein; InterPro IPR007214:IPR004369; KEGG: abu:Abu_1557 hypothetical protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: A8EV32 Conserved hypothetical membrane protein (DUF6); TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein
YP_003655406.1	COGs: COG2902 NAD-specific glutamate dehydrogenase; InterPro IPR007780:IPR016040; KEGG: nam:NAMH_0845 NAD-glutamate dehydrogenase family protein; PFAM: NAD-glutamate dehydrogenase; SPTR: B6BK98 NAD-glutamate dehydrogenase; PFAM: Bacterial NAD-glutamate dehydrogenase
YP_003655407.1	KEGG: rhoptry protein; SPTR: C4IE83 DNA mismatch repair protein MutS domain protein
YP_003655408.1	InterPro IPR020051:IPR000415; KEGG: nis:NIS_0039 hypothetical protein; SPTR: A6Q0Z8 Putative uncharacterized protein; TIGRFAM: SagB-type dehydrogenase domain; PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain
YP_003655409.1	COGs: COG2346 Truncated hemoglobins; InterPro IPR001486:IPR012292:IPR009050; KEGG: abu:Abu_1553 hypothetical protein; PFAM: globin; SPTR: A8EV28 Protozoan/cyanobacterial globin-like protein; PFAM: Bacterial-like globin
YP_003655410.1	KEGG: dsh:Dshi_3592 Cna B domain-containing protein; SPTR: A6E355 Putative uncharacterized protein
YP_003655411.1	COGs: COG2200 FOG: EAL domain; InterProIPR001789:IPR001633:IPR013655:IPR000014:IPR 011006; KEGG: nam:NAMH_1510 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: EAL domain protein; response regulator receiver; SPTR: C2A3I3 PAS domain S-box protein; TIGRFAM: PAS sensor protein; PFAM: EAL domain; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003655412.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR016040; KEGG: dps:DP2578 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B6BKY2 Oxidoreductase; PFAM: Protein of unknown function (DUF2867); NmrA-like family
YP_003655413.1	COGs: COG2995 Uncharacterized paraquat-inducible protein A; InterPro IPR007498; KEGG: aci:ACIAD2737 paraquat-inducible protein A (part 1); PFAM: Paraquat-inducible protein A; SPTR: C8NBJ7 Paraquat-inducible protein A; PFAM: Paraquat-inducible protein A
YP_003655414.1	COGs: COG2995 Uncharacterized paraquat-inducible protein A; InterPro IPR007498; KEGG: csa:Csal_2007 hypothetical protein; PFAM: Paraquat-inducible protein A; SPTR: C1SM75 Uncharacterized paraquat-inducible protein A; PFAM: Paraquat-inducible protein A
YP_003655415.1	COGs: COG3008 Paraquat-inducible protein B; InterPro IPR003399; KEGG: abu:Abu_1551 paraquat-inducible protein B; PFAM: Mammalian cell entry related domain protein; SPTR: A8EV27 Paraquat-inducible protein B; PFAM: mce related protein
YP_003655416.1	COGs: COG0753 Catalase; InterProIPR002226:IPR018028:IPR010582:IPR011614:IPR 020835; KEGG: cff:CFF8240_1057 catalase; PFAM: Catalase related subgroup; Catalase domain protein; PRIAM: Catalase; SPTR: A0RPT7 Catalase; PFAM: Catalase; Catalase-related immune-responsive
YP_003655417.1	COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110:IPR020683; KEGG: abu:Abu_1550 ankyrin repeat-containing protein; PFAM: Ankyrin; SMART: Ankyrin; SPTR: A8EV26 Ankyrin repeat protein; PFAM: Ankyrin repeat
YP_003655418.1	KEGG: abu:Abu_1549 CiaB protein; SPTR: A8EV25 CiaB protein
YP_003655419.1	InterPro IPR008638:IPR011050; KEGG: tdn:Suden_0748 filamentous haemagglutinin-like; PFAM: filamentous haemagglutinin domain protein; SPTR: Q30SK4 Filamentous haemagglutinin-like protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain
YP_003655420.1	COGs: COG4254 conserved hypothetical protein; KEGG: smt:Smal_2915 peptidoglycan-binding LysM; SPTR: Q2BKT2 LysM motif protein; PFAM: FecR protein
YP_003655421.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR007890; KEGG: cyc:PCC7424_3092 diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE2 domain protein; SMART: GGDEF domain containing protein; SPTR: C6PRY3 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: CHASE2 domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655422.1	COGs: COG0326 Molecular chaperone HSP90 family; InterProIPR003594:IPR020576:IPR001404:IPR020575:IPR 020568; KEGG: abu:Abu_1547 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV23 Chaperone protein htpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein
YP_003655423.1	KEGG: conserved hypothetical protein; SPTR: Q8I5C3 Conserved Plasmodium protein
YP_003655424.1	COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: gur:Gura_0409 DNA polymerase beta subunit; PFAM: DNA polymerase beta domain protein region; SPTR: A5GD96 DNA polymerase, beta domain protein region; PFAM: Nucleotidyltransferase domain
YP_003655425.1	COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: cyc:PCC7424_5819 protein of unknown function DUF86; PFAM: protein of unknown function DUF86; SPTR: B7BGC8 Putative uncharacterized protein; PFAM: Protein of unknown function DUF86
YP_003655426.1	InterPro IPR002781; KEGG: abu:Abu_2186 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: A8EWS7 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE
YP_003655427.1	COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: abu:Abu_0849 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A8ET35 Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003655428.1	InterPro IPR000182:IPR016181; KEGG: pin:Ping_2677 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: A1SY24 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_003655429.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010917:IPR012910:IPR000531:IPR010105; KEGG: abu:Abu_1575 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8EV50 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor
YP_003655430.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005:IPR009057; KEGG: abu:Abu_1574 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EV49 Transcriptional regulator, AraC family
YP_003655431.1	InterPro IPR019613; KEGG: abu:Abu_2286 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: A8EX21 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region
YP_003655432.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: mmb:Mmol_1661 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: C6WXB6 Secretion protein HlyD family protein; PFAM: HlyD family secretion protein
YP_003655433.1	InterPro IPR012451; KEGG: rme:Rmet_4277 hypothetical protein; PFAM: protein of unknown function DUF1656; SPTR: Q1LFD3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1656)
YP_003655434.1	COGs: COG1289 membrane protein; InterPro IPR006726; KEGG: mmb:Mmol_1663 fusaric acid resistance protein conserved region; PFAM: Fusaric acid resistance protein conserved region; SPTR: C6WXB8 Fusaric acid resistance protein conserved region; PFAM: Fusaric acid resistance protein family
YP_003655435.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mei:Msip34_1079 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; SPTR: C6XCQ1 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_003655436.1	InterPro IPR000835:IPR011991; KEGG: dhd:Dhaf_1651 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: B8FPH2 Transcriptional regulator, MarR family; PFAM: MarR family
YP_003655437.1	COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR015168:IPR011852; KEGG: mmw:Mmwyl1_1880 TRAP transporter solute receptor TAXI family protein; PFAM: NMT1/THI5 like domain protein; SPTR: B6R392 Trap-type transporter, periplasmic component, putative; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_003655438.1	COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656:IPR011853; KEGG: mmw:Mmwyl1_1879 TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A6VWH4 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein
YP_003655439.1	KEGG: abu:Abu_1546 hypothetical protein; SPTR: A8EV22 Putative uncharacterized protein
YP_003655440.1	KEGG: abu:Abu_2095 hypothetical protein; SPTR: A8EWI9 Putative uncharacterized protein
YP_003655441.1	KEGG: pml:ATP_00081 DNA polymerase III alpha subunit; SPTR: B3R0A4 DNA polymerase III alpha subunit
YP_003655442.1	COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterProIPR001967:IPR012907:IPR018044:IPR012338:IPR 015956; KEGG: noc:Noc_2632 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; PRIAM: Beta-lactamase; SPTR: C0N758 Beta-lactamase, putative; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_003655443.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: tdn:Suden_0709 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q30SP3 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2
YP_003655444.1	COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: nam:NAMH_0122 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: C1ZZI7 Uncharacterized lactam utilization protein B-like protein; PFAM: LamB/YcsF family
YP_003655445.1	SPTR: C9LEN9 MarC family integral membrane protein
YP_003655446.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR013163:IPR005467:IPR004358; KEGG: abu:Abu_0362 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERR3 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003655447.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011991:IPR011006; KEGG: abu:Abu_1582 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EV57 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655448.1	COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: nam:NAMH_0119 putative secreted protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: B9L7E8 Putative secreted protein; PFAM: Bacterial extracellular solute-binding protein, family 7
YP_003655449.1	COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: nam:NAMH_0120 hypothetical protein; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: A6DD07 TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_003655450.1	COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: nam:NAMH_0121 trap dicarboxylate family transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A6DD06 DctM (C4-dicarboxylate permease, large subunit); TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_003655451.1	COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dsh:Dshi_3153 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A3JF20 TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7
YP_003655452.1	COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: swd:Swoo_1734 hypothetical protein; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: B1KNE2 Putative uncharacterized protein; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_003655453.1	COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: swd:Swoo_1735 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A3JF18 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_003655454.1	COGs: COG0388 amidohydrolase; InterPro IPR001110:IPR003010; KEGG: bbe:BBR47_08120 hypothetical protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Q1PXD4 Similar to N-carbamoyl-D-amino acid hydrolase; PFAM: Carbon-nitrogen hydrolase
YP_003655455.1	COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: gdj:Gdia_2262 dimethylmenaquinone methyltransferase; PFAM: Dimethylmenaquinone methyltransferase; SPTR: A9H2C7 Putative demethylmenaquinone methyltransferase protein; PFAM: Demethylmenaquinone methyltransferase
YP_003655456.1	COGs: COG4336 conserved hypothetical protein; InterPro IPR009906; KEGG: cbe:Cbei_2760 hypothetical protein; PFAM: protein of unknown function DUF1445; SPTR: C1ZXZ8 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF1445)
YP_003655457.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011991:IPR011006; KEGG: abu:Abu_1582 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EV57 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655458.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR002464:IPR013163:IPR005467:IPR 004358; KEGG: abu:Abu_1583 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EV58 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003655459.1	COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: nam:NAMH_0122 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: A6DD05 Putative uncharacterized protein; PFAM: LamB/YcsF family
YP_003655460.1	COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833:IPR010016; KEGG: swd:Swoo_1737 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: C1ZZI8 Putative uncharacterized protein; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370
YP_003655461.1	COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: cps:CPS_1985 allophanate hydrolase domain-containing protein; PFAM: Allophanate hydrolase subunit 2; PRIAM: Urea carboxylase; SMART: Allophanate hydrolase subunit 2; SPTR: C1ZZI9 Biotin-dependent carboxylase-like protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain
YP_003655462.1	COGs: COG0586 membrane-associated protein; KEGG: abu:Abu_1544 hypothetical protein; SPTR: A8EV20 Conserved hypothetical integral membrane protein; PFAM: SNARE associated Golgi protein
YP_003655463.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014001:IPR001650:IPR000629:IPR011545:IPR 005580:IPR014021:IPR014014; KEGG: abu:Abu_1543 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8EV19 ATP-dependent RNA helicase DbpA; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase
YP_003655464.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_1300 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8EUD3 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655465.1	COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: tgr:Tgr7_2543 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: B8GM32 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain
YP_003655466.1	InterPro IPR005821; KEGG: abu:Abu_1752 ion transport protein; PFAM: Ion transport protein; SPTR: A8EVM5 Ion transport protein; PFAM: Ion transport protein
YP_003655467.1	COGs: COG1078 HD superfamily phosphohydrolase; KEGG: abu:Abu_1539 hypothetical protein; SPTR: A8EV15 Putative uncharacterized protein; PFAM: HD domain
YP_003655468.1	KEGG: dsa:Desal_0777 hypothetical protein; SPTR: C2HFJ3 Putative uncharacterized protein
YP_003655469.1	COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714; KEGG: abu:Abu_1538 PhoH family protein; PFAM: PhoH family protein; SPTR: A8EV14 PhoH family protein; PFAM: PhoH-like protein
YP_003655470.1	COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: abu:Abu_0364 S-adenosylmethionine:2-demethylmenaquinone methyltransferase; PFAM: Dimethylmenaquinone methyltransferase; SPTR: A8ERR5 S-adenosylmethionine:2-demethylmenaquinone methyltransferase; PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy
YP_003655471.1	COGs: COG1278 Cold shock protein; InterProIPR011129:IPR019844:IPR002059:IPR012156:IPR 012340:IPR016027; KEGG: tdn:Suden_1504 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B6BNR1 'Cold-shock' DNA-binding domain, putative; PFAM: 'Cold-shock' DNA-binding domain
YP_003655473.1	InterPro IPR013216; KEGG: dba:Dbac_0907 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: C7LPH9 Methyltransferase type 11; PFAM: Methyltransferase domain
YP_003655474.1	COGs: COG1651 Protein-disulfide isomerase; InterPro IPR017936:IPR012335:IPR012336; KEGG: rfr:Rfer_0414 DsbA oxidoreductase; SPTR: Q221Y5 DSBA oxidoreductase
YP_003655475.1	COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: mba:Mbar_A0710 hypothetical protein; PFAM: pentapeptide repeat protein; SPTR: A0YKR1 Putative uncharacterized protein; PFAM: Pentapeptide repeats (8 copies)
YP_003655476.1	InterPro IPR012335:IPR012336; KEGG: sun:SUN_0692 hypothetical protein; SPTR: A6Q842 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255
YP_003655477.1	COGs: COG1359 conserved hypothetical protein; InterPro IPR007138:IPR011008; KEGG: tdn:Suden_1481 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q30QH3 Antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase
YP_003655478.1	COGs: COG3347 conserved hypothetical protein; InterPro IPR001303; KEGG: sun:SUN_0120 oxidoreductase; PFAM: class II aldolase/adducin family protein; SPTR: A6Q6H1 Oxidoreductase; PFAM: Class II Aldolase and Adducin N-terminal domain
YP_003655479.1	COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129:IPR017946; KEGG: tdn:Suden_1231 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: Q30R72 Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_003655480.1	COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: dsa:Desal_3306 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C6BRX3 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003655481.1	COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I; InterPro IPR000515; KEGG: dat:HRM2_45430 PotB1; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0QG20 PotB1; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003655482.1	KEGG: dat:HRM2_45440 PotA1; SPTR: C0QG21 PotA1
YP_003655483.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR017871:IPR003439; KEGG: dsa:Desal_3308 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6BRX5 ABC transporter related; PFAM: ABC transporter
YP_003655484.1	COGs: COG0687 Spermidine/putrescine-binding periplasmic protein; InterPro IPR006059:IPR001188; KEGG: dat:HRM2_45450 PotD; PFAM: extracellular solute-binding protein family 1; SPTR: C0QG22 PotD; PFAM: Bacterial extracellular solute-binding protein
YP_003655485.1	COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: tdn:Suden_1477 autoinducer-2 (AI-2) kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Q30QH7 Carbohydrate kinase, FGGY; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_003655486.1	InterPro IPR013096:IPR014710:IPR011051; KEGG: swd:Swoo_3746 cupin 2 domain-containing protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: B1KE03 Cupin 2 conserved barrel domain protein; PFAM: Cupin domain
YP_003655487.1	InterPro IPR005821:IPR003091; KEGG: det:DET0408 cation channel family protein; PFAM: Ion transport protein; SPTR: A8CTL0 Ion transport protein; PFAM: Ion transport protein
YP_003655488.1	KEGG: hypothetical protein; SPTR: B3L5T4 Putative uncharacterized protein
YP_003655489.1	COGs: COG0748 Putative heme iron utilization protein; InterPro IPR012349:IPR009002; KEGG: ava:Ava_2287 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; SPTR: B4WRR2 Pyridoxamine 5'-phosphate oxidase family protein; PFAM: Pyridoxamine 5'-phosphate oxidase
YP_003655490.1	KEGG: sun:SUN_1166 hypothetical protein; SPTR: A6Q9G2 Putative uncharacterized protein
YP_003655491.1	COGs: COG2951 Membrane-bound lytic murein transglycosylase B; KEGG: sun:SUN_0481 membrane-bound lytic murein transglycosylase; SPTR: A6Q7I2 Membrane-bound lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase B
YP_003655492.1	KEGG: sun:SUN_0843 hypothetical protein; SPTR: A6Q8J2 Putative uncharacterized protein
YP_003655493.1	InterProIPR017937:IPR013740:IPR017936:IPR012335:IPR 012336; KEGG: abu:Abu_1448 putative lipoprotein thiredoxin; PFAM: Redoxin domain protein; SPTR: A8EUS9 Putative lipoprotein thiredoxin; PFAM: Redoxin
YP_003655494.1	InterPro IPR003752:IPR012187; KEGG: abu:Abu_1450 DsbB family disulfide bond formation protein; PFAM: Disulphide bond formation protein DsbB; SPTR: A8EUT1 Disulfide bond formation protein, DsbB family; PFAM: Disulfide bond formation protein DsbB
YP_003655495.1	KEGG: efa:EF2616 SsrA-binding protein; SPTR: B6BKA5 Putative uncharacterized protein
YP_003655496.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003594:IPR003661:IPR005467:IPR000014:IPR 004358:IPR009082; KEGG: abu:Abu_0102 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ER13 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003655497.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003593:IPR017871:IPR001140:IPR003439:IPR 017940:IPR011527; KEGG: tdn:Suden_0069 ABC transporter-related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Q30UI1 ABC transporter-related protein; PFAM: ABC transporter transmembrane region; ABC transporter
YP_003655498.1	KEGG: maa:MAG_1370 valyl-tRNA synthetase; SPTR: A5IXS6 Valyl-tRNA synthetase (Valine-tRNA ligase)(VALRS)
YP_003655499.1	COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834:IPR006402; KEGG: abu:Abu_1447 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8EUS8 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_003655500.1	KEGG: pmx:PERMA_1654 hypothetical protein; SPTR: C0QRX4 Putative uncharacterized protein
YP_003655501.1	KEGG: abu:Abu_1531 hypothetical protein; SPTR: A8EV11 Putative uncharacterized protein
YP_003655502.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: tdn:Suden_0442 peptidase M23B; PFAM: Peptidase M23; SPTR: B6BMB6 Peptidase M23B; PFAM: Peptidase family M23
YP_003655503.1	KEGG: sus:Acid_0010 hypothetical protein; SPTR: A3XQQ2 Putative uncharacterized protein
YP_003655504.1	COGs: COG0217 conserved hypothetical protein; InterPro IPR002876:IPR017856; KEGG: abu:Abu_1442 hypothetical protein; PFAM: protein of unknown function DUF28; SPTR: A8EUS3 Putative uncharacterized protein; PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033
YP_003655505.1	COGs: COG1225 Peroxiredoxin; InterPro IPR000866:IPR017936:IPR012335:IPR012336; KEGG: bid:Bind_1843 redoxin domain-containing protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A0YKJ1 BcpB; PFAM: Redoxin
YP_003655506.1	COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: wsu:WS1322 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: C5ZX64 Putative uncharacterized protein; PFAM: Peptidase family M48
YP_003655507.1	KEGG: cha:CHAB381_1592 hypothetical protein; SPTR: A7I3M5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3108)
YP_003655508.1	COGs: COG2962 permease; InterPro IPR000620; KEGG: sme:SMc00706 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8TNP7 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_003655509.1	InterPro IPR012660; KEGG: abu:Abu_1440 thioesterase/acetyltransferase, putative; PFAM: Thioesterase putative; SPTR: A8EUS1 Thioesterase/acetyltransferase, putative; PFAM: Putative thioesterase (yiiD_Cterm); TIGRFAM: thioesterase domain, putative
YP_003655510.1	COGs: COG1647 Esterase/lipase; InterPro IPR002123:IPR003140; KEGG: dol:Dole_1932 esterase/lipase-like protein; PFAM: phospholipid/glycerol acyltransferase; phospholipase/Carboxylesterase; SPTR: B6BLQ2 Acyltransferase domain protein; PFAM: Acyltransferase; Prolyl oligopeptidase family; Phospholipase/Carboxylesterase
YP_003655511.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006089:IPR006092:IPR006091:IPR006090:IPR 015396:IPR013786:IPR013764:IPR009100:IPR009075; KEGG: rmr:Rmar_1705 protein of unknown function DUF1974; PFAM: Protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; SPTR: C1ZPX1 Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain
YP_003655512.1	COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR006180:IPR001753:IPR006176:IPR006108:IPR 016040:IPR013328:IPR008927; KEGG: pin:Ping_2604 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: B6BLQ4 Fatty acid oxidation complex alpha subunit; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_003655513.1	COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: pin:Ping_2605 acetyl-CoA acetyltransferases; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: B6BLQ5 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_003655514.1	COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: pin:Ping_2606 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A1SXW0 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme
YP_003655515.1	COGs: COG1049 Aconitase B; InterProIPR018136:IPR015929:IPR001030:IPR004406:IPR 015933:IPR015928:IPR015931:IPR015932; KEGG: abu:Abu_1439 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; PFAM: Aconitase B; aconitate hydratase domain protein; SPTR: A8EUS0 Aconitate hydratase 2; TIGRFAM: aconitate hydratase 2; PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2
YP_003655516.1	COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR005834:IPR006357; KEGG: fnu:FN1255 NagD protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Q8RE68 NagD protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA
YP_003655517.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sit:TM1040_3214 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q1GMC8 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003655518.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bpt:Bpet0073 glycerol-3-phosphat transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A9HVY4 Glycerol-3-phosphat transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003655519.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: rde:RD1_3571 glycerol-3-phosphate ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: B6AZA8 Glycerol-3-phosphate ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding protein
YP_003655520.1	COGs: COG3839 ABC-type sugar transport systems ATPase components; InterProIPR003593:IPR017871:IPR003439:IPR013611:IPR 008995; KEGG: dvm:DvMF_0655 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: B6R2E8 Sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter; TOBE domain
YP_003655521.1	COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: dat:HRM2_41360 GlpR1; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: A0NN46 Transcriptional regulator, DeoR family protein; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_003655522.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: abu:Abu_1438 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8EUR9 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003655523.1	COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137; KEGG: abu:Abu_1437 Ni/Fe-dependent hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: A8EUR8 Ni/Fe-dependent hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA)
YP_003655524.1	COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: abu:Abu_1436 Ni/Fe-dependent hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: A8EUR7 Ni/Fe-dependent hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase
YP_003655525.1	COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137:IPR001821:IPR017909:IPR006311; KEGG: abu:Abu_1435 Ni/Fe-hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: Hydrogen:quinone oxidoreductase; SPTR: A8EUR6 Ni/Fe-hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA)
YP_003655526.1	COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: abu:Abu_1434 Ni/Fe-hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: A8EUR5 Ni/Fe-hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase
YP_003655527.1	COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR011577:IPR000516:IPR016174; KEGG: abu:Abu_1433 Ni/Fe hydrogenase, cytochrome b subunit; PFAM: cytochrome B561; SPTR: A8EUR4 Ni/Fe hydrogenase, cytochrome b subunit; PFAM: Cytochrome b(N-terminal)/b6/petB
YP_003655528.1	COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: abu:Abu_1432 Ni/Fe hydrogenase, expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; SPTR: A8EUR3 Ni/Fe hydrogenase, expression/formation protein; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease
YP_003655529.1	KEGG: abu:Abu_1431 hypothetical protein; SPTR: A8EUR2 Putative uncharacterized protein
YP_003655530.1	COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterProIPR019546:IPR006137:IPR001821:IPR017909:IPR 006311; KEGG: abu:Abu_1428 Ni/Fe-hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Twin-arginine translocation pathway, signal sequence, subgroup; PRIAM: Hydrogen:quinone oxidoreductase; SPTR: A8EUQ9 Ni/Fe-hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); Tat (twin-arginine translocation) pathway signal sequence
YP_003655531.1	COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: abu:Abu_1427 Ni/Fe-hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: A8EUQ8 Ni/Fe-hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase
YP_003655532.1	COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR000516:IPR011577:IPR016174; KEGG: abu:Abu_1426 Ni/Fe hydrogenase, cytochrome b subunit; PFAM: cytochrome B561; SPTR: A8EUQ7 Ni/Fe hydrogenase, cytochrome b subunit; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit
YP_003655533.1	COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: abu:Abu_1425 Ni/Fe hydrogenase, expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; SPTR: A8EUQ6 Ni/Fe hydrogenase, expression/formation protein; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease
YP_003655534.1	KEGG: abu:Abu_1424 hypothetical protein; SPTR: A8EUQ5 Putative uncharacterized protein
YP_003655535.1	COGs: COG0068 Hydrogenase maturation factor; InterProIPR017968:IPR001792:IPR011125:IPR006070:IPR 004421:IPR017945; KEGG: abu:Abu_1423 transcriptional regulatory protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; SPTR: A8EUQ4 Transcriptional regulatory protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; Sua5/YciO/YrdC/YwlC family protein
YP_003655536.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_0789 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESY0 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655537.1	KEGG: pph:Ppha_1478 hypothetical protein; SPTR: C5S7R9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892)
YP_003655538.1	KEGG: abu:Abu_1417 hypothetical protein; SPTR: A8EUP8 Putative uncharacterized protein
YP_003655539.1	KEGG: abu:Abu_0750 hypothetical protein; SPTR: A8ESU1 Putative uncharacterized protein
YP_003655540.1	KEGG: abu:Abu_1409 hypothetical protein; SPTR: A8EUP0 Putative uncharacterized protein
YP_003655541.1	InterPro IPR009710; KEGG: dat:HRM2_17470 hypothetical protein; PFAM: protein of unknown function DUF1291; SPTR: C0QB52 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_003655542.1	InterPro IPR011701:IPR016196; KEGG: hhe:HH1109 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: A1ZUS3 MFS permease (Drug); PFAM: Major Facilitator Superfamily
YP_003655543.1	InterPro IPR003731; KEGG: wsu:WS0215 hypothetical protein; SPTR: C5F024 Putative uncharacterized protein; PFAM: Dinitrogenase iron-molybdenum cofactor
YP_003655544.1	COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR003495:IPR012202:IPR004392; KEGG: abu:Abu_1408 hydrogenase expression/formation protein HypB; PFAM: cobalamin synthesis protein P47K; SPTR: A8EUN9 Hydrogenase expression/formation protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB
YP_003655545.1	COGs: COG0298 Hydrogenase maturation factor; InterPro IPR000276:IPR001109; KEGG: abu:Abu_1407 hydrogenase expression/formation protein HypC; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); SPTR: A8EUN8 Hydrogenase expression/formation protein HypC; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF
YP_003655546.1	COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: tdn:Suden_1428 hydrogenase formation HypD protein; PFAM: hydrogenase formation HypD protein; SPTR: Q30QM6 Hydrogenase formation HypD protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD
YP_003655547.1	COGs: COG0518 GMP synthase - Glutamine amidotransferase domain; InterPro IPR000991:IPR017926; KEGG: cph:Cpha266_0839 glutamine amidotransferase; PFAM: glutamine amidotransferase class-I; SPTR: A1BER3 Glutamine amidotransferase class-I; PFAM: Glutamine amidotransferase class-I
YP_003655548.1	COGs: COG0309 Hydrogenase maturation factor; InterPro IPR000728:IPR010918:IPR011854:IPR016188; KEGG: abu:Abu_1401 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; SPTR: B6BMU9 Hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE
YP_003655549.1	COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); InterPro IPR020538:IPR000688; KEGG: abu:Abu_1400 hydrogenase expression/formation protein HypA; PFAM: hydrogenase expression/synthesis HypA; SPTR: A8EUN1 Hydrogenase expression/formation protein HypA; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA
YP_003655550.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR004010; KEGG: tdn:Suden_0965 cache sensor signal transduction histidine kinase; PFAM: GGDEF domain containing protein; Cache domain protein; SMART: GGDEF domain containing protein; SPTR: B6BIH5 Cache sensor signal transduction histidine kinase; TIGRFAM: diguanylate cyclase; PFAM: Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655551.1	COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828:IPR000709; KEGG: cla:Cla_1110 branched-chain amino-acid ABC transporter, periplasmic binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: C1ZXK0 ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region
YP_003655552.1	COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: cff:CFF8240_0400 hydrophobic amino acid ABC transporter permease/ATP-binding protein; PFAM: inner-membrane translocator; SPTR: C1ZXJ9 Branched-chain amino acid ABC-type transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component
YP_003655553.1	COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: cff:CFF8240_0401 ABC transport system permease protein; PFAM: inner-membrane translocator; SPTR: C1ZXJ8 ABC-type branched-chain amino acid transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component
YP_003655554.1	COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: cla:Cla_1114 branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1ZXJ7 ABC-type branched-chain amino acid transport system, ATPase component; PFAM: ABC transporter
YP_003655555.1	COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: wsu:WS1466 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q7M8R8 ABC TRANSPORT SYSTEM ATP-BINDING PROTEIN; PFAM: ABC transporter
YP_003655556.1	KEGG: abu:Abu_1399 hypothetical protein; SPTR: A8EUN0 Putative uncharacterized protein
YP_003655557.1	KEGG: ppr:PBPRB0253 hypothetical protein; SPTR: Q6LL93 Putative uncharacterized protein SCM1.35C
YP_003655558.1	KEGG: abu:Abu_1398 hypothetical protein; SPTR: A8EUM9 Putative uncharacterized protein
YP_003655559.1	KEGG: abu:Abu_1397 hypothetical protein; SPTR: A8EUM8 Putative uncharacterized protein
YP_003655560.1	InterPro IPR012902; KEGG: abu:Abu_1396 hypothetical protein; SPTR: A8EUM7 Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_003655561.1	COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterProIPR014001:IPR001650:IPR011545:IPR014021:IPR 005259; KEGG: abu:Abu_1395 primosome assembly protein PriA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8EUM6 Primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'
YP_003655562.1	COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451:IPR011004; KEGG: abu:Abu_1392 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD; SPTR: A8EUM3 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
YP_003655563.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: tdn:Suden_1484 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q30QH0 Diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655564.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: abu:Abu_0998 hypothetical protein; PFAM: Peptidase M23; SPTR: A8ETI4 Putative uncharacterized protein; PFAM: Peptidase family M23
YP_003655565.1	InterPro IPR017970; KEGG: abu:Abu_0999 cell division protein FtsX; SPTR: A8ETI5 Cell division protein FtsX
YP_003655566.1	COGs: COG2884 ATPase involved in cell division; InterPro IPR003593:IPR017871:IPR003439; KEGG: abu:Abu_1000 cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETI6 Cell division ATP-binding protein FtsE; PFAM: ABC transporter
YP_003655567.1	COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; InterPro IPR003358; KEGG: abu:Abu_1001 tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; PRIAM: tRNA (guanine-N(7)-)-methyltransferase; SPTR: A8ETI7 Putative uncharacterized protein; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase
YP_003655568.1	COGs: COG3401 Fibronectin type 3 domain-containing protein; InterPro IPR003961:IPR008957; KEGG: abu:Abu_1002 fibronectin type III domain-containing protein; PFAM: Fibronectin type III domain protein; SPTR: A8ETI8 Fibronectin type III domain protein; PFAM: Fibronectin type III domain
YP_003655569.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterProIPR002942:IPR006224:IPR006145:IPR006225:IPR 020103; KEGG: abu:Abu_1003 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: A8ETI9 Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_003655570.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: abu:Abu_1004 rod shape-determining protein RodA; PFAM: cell cycle protein; SPTR: A8ETJ0 Rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA
YP_003655571.1	COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR020855:IPR006035:IPR005925; KEGG: cpe:CPE0551 agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: B1BND6 Agmatinase; TIGRFAM: agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase
YP_003655572.1	KEGG: abu:Abu_1038 hypothetical protein; SPTR: A8ETM4 Putative uncharacterized protein; TIGRFAM: outer membrane insertion C-terminal signal
YP_003655573.1	KEGG: cth:Cthe_2304 hypothetical protein; SPTR: A3DHS7 Putative uncharacterized protein; PFAM: Methylenetetrahydrofolate reductase
YP_003655574.1	InterPro IPR006260; KEGG: abu:Abu_1005 hypothetical protein; SPTR: A8ETJ1 Conserved hypothetical membrane protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_003655575.1	COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR015421:IPR004639:IPR015424; KEGG: abu:Abu_1006 glutamate-1-semialdehyde aminotransferase; PFAM: aminotransferase class-III; SPTR: A8ETJ2 Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_003655576.1	COGs: COG3123 conserved hypothetical protein; InterPro IPR009664; KEGG: abu:Abu_1007 hypothetical protein; PFAM: protein of unknown function DUF1255; SPTR: A8ETJ3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1255)
YP_003655577.1	KEGG: abu:Abu_1008 hypothetical protein; SPTR: A8ETJ4 Putative uncharacterized protein
YP_003655578.1	KEGG: abu:Abu_1009 hypothetical protein; SPTR: A8ETJ5 Putative uncharacterized protein
YP_003655579.1	KEGG: abu:Abu_1010 hypothetical protein; SPTR: A8ETJ6 Putative uncharacterized protein
YP_003655580.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943:IPR009042:IPR007627:IPR007624:IPR 007630:IPR011991:IPR014284:IPR012760:IPR013325:IPR013324; KEGG: abu:Abu_1011 RNA polymerase sigma factor RpoD; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; SPTR: A8ETJ7 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_003655581.1	COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR000573:IPR015928:IPR011827; KEGG: abu:Abu_1012 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; SPTR: A8ETJ8 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_003655582.1	COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR019818:IPR001804:IPR004429; KEGG: abu:Abu_1013 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: A8ETJ9 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_003655583.1	COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR003156:IPR016877; KEGG: abu:Abu_1014 exopolyphosphatase-related protein; PFAM: phosphoesterase DHHA1; SPTR: A8ETK0 Exopolyphosphatase-related protein; PFAM: DHHA1 domain
YP_003655584.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: cbo:CBO1149 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6PUR8 ABC transporter related protein; PFAM: ABC transporter
YP_003655585.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: cbo:CBO1150 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A5I0Z1 ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003655586.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: cbo:CBO1151 ABC transporter, substrate-binding lipoprotein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C6PUR6 Extracellular solute-binding protein family 3; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003655587.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261:IPR002933:IPR010964:IPR011650; KEGG: hor:Hore_08190 Xaa-His dipeptidase; PFAM: peptidase M20; SPTR: B8CWA7 Xaa-His dipeptidase; TIGRFAM: dipeptidase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: dipeptidase, putative
YP_003655588.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011151:IPR011146; KEGG: abu:Abu_1015 HIT family protein; PFAM: histidine triad (HIT) protein; SPTR: A8ETK1 HIT family protein; PFAM: HIT domain
YP_003655589.1	COGs: COG2206 HD-GYP domain; InterPro IPR003018:IPR003607:IPR006674; KEGG: tdn:Suden_0930 metal dependent phosphohydrolase; PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region; SPTR: Q30S23 Metal dependent phosphohydrolase; PFAM: cAMP phosphodiesterases class-II; GAF domain
YP_003655590.1	COGs: COG0099 Ribosomal protein S13; InterPro IPR018269:IPR001892:IPR019980:IPR010979; KEGG: abu:Abu_1017 30S ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: A8ETK3 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13
YP_003655591.1	COGs: COG0100 Ribosomal protein S11; InterPro IPR018102:IPR001971:IPR019981; KEGG: abu:Abu_1018 30S ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: A8ETK4 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_003655592.1	COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR002942:IPR001912:IPR005709; KEGG: abu:Abu_1019 30S ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: A8ETK5 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_003655593.1	COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterProIPR011263:IPR011260:IPR011261:IPR011262:IPR 011773:IPR009025; KEGG: abu:Abu_1020 DNA-directed RNA polymerase subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: A8ETK6 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_003655594.1	COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: abu:Abu_1021 50S ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: A8ETK7 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_003655595.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR020556:IPR000120:IPR004412; KEGG: abu:Abu_1022 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; SPTR: A8ETK8 Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit
YP_003655596.1	COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR000644:IPR015875:IPR001093:IPR018529:IPR 013785:IPR005990; KEGG: abu:Abu_1023 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: A8ETK9 Inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_003655597.1	KEGG: tcx:Tcr_2182 hypothetical protein; SPTR: C1SHZ4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2975)
YP_003655598.1	COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: tcx:Tcr_2183 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein; SPTR: Q31DK2 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix
YP_003655599.1	InterPro IPR003756:IPR006442; KEGG: dal:Dalk_1773 prevent-host-death family protein; PFAM: protein of unknown function DUF172; SPTR: B8FFR5 Prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_003655600.1	COGs: COG4115 conserved hypothetical protein; InterPro IPR009614:IPR012753; KEGG: dol:Dole_2607 addiction module antitoxin; PFAM: Addiction module toxin Txe/YoeB; SPTR: A8SAR2 Putative uncharacterized protein; TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: addiction module toxin, RelE/StbE family; toxin-antitoxin system, toxin component, Txe/YoeB family
YP_003655601.1	KEGG: hypothetical protein; SPTR: A3I0E2 Putative uncharacterized protein
YP_003655602.1	COGs: COG2337 Growth inhibitor; InterPro IPR003477:IPR011067; KEGG: lil:LA1781 ppGpp-regulated growth inhibitor ChpA/MazF; PFAM: PemK family protein; SPTR: A7BW34 PemK-like protein; PFAM: PemK-like protein
YP_003655603.1	COGs: COG2336 Growth regulator; InterPro IPR007159; KEGG: ect:ECIAI39_3202 antitoxin MazE; PFAM: SpoVT/AbrB domain protein; SPTR: B7NV73 Antitoxin of the ChpA-ChpR toxin-antitoxin system; PFAM: SpoVT / AbrB like domain
YP_003655604.1	KEGG: paa:Paes_0464 cytochrome c, putative; SPTR: B4S522 Cytochrome c, putative
YP_003655605.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: dsa:Desal_3432 lysine exporter protein (LysE/YggA); PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: C6BSM4 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator
YP_003655606.1	InterPro IPR013096:IPR014710:IPR011051; KEGG: abu:Abu_1024 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: A8ETL0 Putative uncharacterized protein; PFAM: Cupin domain
YP_003655607.1	KEGG: rps3; small ribosomal protein 3; SPTR: A5J030 Small ribosomal protein 3
YP_003655608.1	COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: sun:SUN_1130 hypothetical protein; PFAM: Excinuclease ABC C subunit domain protein; SPTR: A6Q9C6 Putative uncharacterized protein; PFAM: GIY-YIG catalytic domain
YP_003655609.1	COGs: COG0716 Flavodoxins; InterPro IPR008254:IPR010086:IPR001094; KEGG: hhe:HH0712 flavodoxin FldA; PFAM: flavodoxin/nitric oxide synthase; SPTR: C5F298 Flavodoxin; TIGRFAM: flavodoxin; PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain
YP_003655610.1	COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: bfs:BF0426 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: B3C6Z4 Putative uncharacterized protein; PFAM: Domain of unknown function DUF59
YP_003655611.1	KEGG: scl:sce8527 hypothetical protein; SPTR: A9FZ05 Putative uncharacterized protein
YP_003655612.1	COGs: COG0586 membrane-associated protein; KEGG: nis:NIS_0705 hypothetical protein; SPTR: A6Q2W0 Putative uncharacterized protein; PFAM: SNARE associated Golgi protein
YP_003655613.1	InterPro IPR001818; KEGG: abb:ABBFA_003506 Matrixin family protein; PFAM: peptidase M10A and M12B matrixin and adamalysin; SPTR: B7IBK4 Matrixin superfamily; PFAM: Matrixin
YP_003655614.1	KEGG: hypothetical protein; SPTR: C5NVK8 Putative late embryogenesis abundant protein
YP_003655615.1	KEGG: ppf:Pput_3688 hypothetical protein; SPTR: B6BNH3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3144)
YP_003655616.1	COGs: COG2603 ATPase; InterPro IPR001763:IPR017582; KEGG: sun:SUN_1828 tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; SPTR: A6QBB6 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase
YP_003655617.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: abu:Abu_2220 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8EWW0 NADH dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003655618.1	InterPro IPR004843:IPR011152; KEGG: cps:CPS_3115 Ser/Thr protein phosphatase family protein; PFAM: metallophosphoesterase; SPTR: Q47ZF8 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase
YP_003655619.1	KEGG: hba:Hbal_0541 putative thiol-disulphide oxidoreductase DCC; SPTR: C6XN73 Putative thiol-disulphide oxidoreductase DCC
YP_003655620.1	InterPro IPR013096:IPR011051; KEGG: cts:Ctha_1275 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: B3QZ45 Cupin 2 conserved barrel domain protein; PFAM: Cupin domain
YP_003655621.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: maq:Maqu_2975 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A1U4Y0 Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 2
YP_003655622.1	COGs: COG1816 Adenosine deaminase; InterPro IPR001365:IPR006330; KEGG: pcr:Pcryo_0456 adenosine deaminase; PFAM: adenosine/AMP deaminase; PRIAM: Adenosine deaminase; SPTR: Q1QDL4 Adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_003655623.1	COGs: COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent); InterPro IPR003726; KEGG: bsu:BSU02410 homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; SPTR: C2A2N3 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent); PFAM: Homocysteine S-methyltransferase
YP_003655624.1	KEGG: merozoite surface protein 3 beta (MSP3b); SPTR: Q64JV1 Merozoite surface protein 3b (Fragment)
YP_003655625.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: hch:HCH_00127 putative threonine efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: C1SKU0 Putative threonine efflux protein; PFAM: LysE type translocator
YP_003655626.1	KEGG: abu:Abu_1025 hypothetical protein; SPTR: A8ETL1 Putative uncharacterized protein
YP_003655627.1	COGs: COG3124 conserved hypothetical protein; InterPro IPR007431; KEGG: cyc:PCC7424_1921 protein of unknown function DUF479; PFAM: protein of unknown function DUF479; SPTR: B4AZU8 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF479
YP_003655628.1	InterPro IPR007272; KEGG: mag:amb0857 transporter component; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: A4TYH9 YeeE/YedE; PFAM: YeeE/YedE family (DUF395)
YP_003655629.1	KEGG: abu:Abu_1378 hypothetical protein; SPTR: A8EUK9 Putative uncharacterized protein
YP_003655630.1	COGs: COG2731 Beta-galactosidase beta subunit; InterPro IPR004375; KEGG: abu:Abu_0837 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8ET28 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF386); TIGRFAM: conserved hypothetical protein
YP_003655631.1	COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: pin:Ping_3150 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A1SZC3 TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7
YP_003655632.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR017871:IPR003439; KEGG: tdn:Suden_0143 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B6BGN1 ATP-binding protein of an ABC transporter complex; PFAM: ABC transporter
YP_003655633.1	KEGG: amr:AM1_0690 hypothetical protein; SPTR: A4BD05 Putative uncharacterized protein; PFAM: Putative phosphatase (DUF442)
YP_003655634.1	COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: hch:HCH_02826 dienelactone hydrolase; PFAM: dienelactone hydrolase; SPTR: C1SI66 Dienelactone hydrolase-like enzyme; PFAM: Dienelactone hydrolase family
YP_003655635.1	COGs: COG2021 Homoserine acetyltransferase; InterPro IPR000073:IPR008220:IPR006296; KEGG: abu:Abu_1376 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; PRIAM: Homoserine O-acetyltransferase; SPTR: A8EUK7 Homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase
YP_003655636.1	InterPro IPR003761; KEGG: abu:Abu_1375 hypothetical protein; PFAM: Exonuclease VII small subunit; SPTR: A8EUK6 Putative uncharacterized protein; PFAM: Exonuclease VII small subunit
YP_003655637.1	COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: nis:NIS_1708 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: A6Q5Q5 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc
YP_003655638.1	KEGG: cjj:CJJ81176_pVir0047 hypothetical protein; SPTR: Q8GJA8 Putative uncharacterized protein Cjp47
YP_003655639.1	KEGG: cjj:CJJ81176_pVir0047 hypothetical protein; SPTR: Q8GJA8 Putative uncharacterized protein Cjp47; PFAM: PemK-like protein
YP_003655640.1	COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052:IPR003356:IPR002296; KEGG: cch:Cag_0807 DNA-methyltransferase, type I restriction-modification enzyme subunit M; PFAM: N-6 DNA methylase; SPTR: Q1VS78 DNA-methyltransferase, type I restriction-modification enzyme subunit M; PFAM: N-6 DNA Methylase; HsdM N-terminal domain
YP_003655641.1	COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: pin:Ping_0149 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: C0N6G4 Type I restriction modification DNA specificity domain protein; PFAM: Type I restriction modification DNA specificity domain
YP_003655642.1	COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR014001:IPR007409:IPR006935:IPR013670:IPR 014021:IPR001650; KEGG: cch:Cag_0810 DEAD/DEAH box helicase-like; PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: A4ALZ5 DEAD/DEAH box helicase-like protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; EcoEI R protein C-terminal
YP_003655643.1	KEGG: hypothetical protein; SPTR: C2A0Q6 Putative uncharacterized protein
YP_003655644.1	COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR016040:IPR009036; KEGG: nis:NIS_1273 ThiF/MoeB/HesA family protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: A6Q4H2 ThiF/MoeB/HesA family protein; PFAM: ThiF family
YP_003655645.1	COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR005479:IPR005481:IPR005480:IPR011607:IPR 011761:IPR013817:IPR013816:IPR006275:IPR005483:IPR016185; KEGG: abu:Abu_1372 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: A8EUK3 Carbamoylphosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_003655646.1	KEGG: abu:Abu_1371 hypothetical protein; SPTR: A8EUK2 Putative uncharacterized protein
YP_003655647.1	InterPro IPR011579:IPR004256; KEGG: cff:CFF8240_0485 ATPase; PFAM: ATPase; DUF234 DEXX-box ATPase; SPTR: A0RN97 ATPase; PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function
YP_003655648.1	InterPro IPR011659:IPR002126:IPR010221:IPR015919; KEGG: cja:CJA_1396 putative hemolysin; SPTR: C1SJC9 VCBS repeat-containing protein; TIGRFAM: outer membrane adhesin like proteiin; TIGRFAM: VCBS repeat
YP_003655649.1	InterPro IPR001343:IPR018512; KEGG: abu:Abu_2179 hypothetical protein; PFAM: Hemolysin-type calcium-binding region; SPTR: A8EWS0 Putative uncharacterized protein
YP_003655650.1	KEGG: abu:Abu_1560 putative DNA-binding protein; SPTR: A8EV35 Putative DNA-binding protein
YP_003655651.1	InterPro IPR007751; KEGG: etw:ECSP_2872 putative virulence factor; PFAM: Protein of unknown function DUF676 hydrolase domain protein; SPTR: D0FVW3 Conserved uncharacterized protein; PFAM: PGAP1-like protein
YP_003655652.1	KEGG: etw:ECSP_2871 hypothetical protein; SPTR: C6V1H2 Putative uncharacterized protein
YP_003655653.1	KEGG: ebr:ECB_02001 hypothetical protein; SPTR: C6UKP8 Putative uncharacterized protein
YP_003655654.1	KEGG: hypothetical protein; SPTR: Q9AVY2 TFIIB related factor hBRF
YP_003655655.1	KEGG: bcc:BCc_073 hypothetical protein; SPTR: Q057Z8 TRNA(Ile)-lysidine synthetase
YP_003655656.1	KEGG: hypothetical protein; SPTR: Q8I5K3 Conserved Plasmodium protein
YP_003655657.1	COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597:IPR011460:IPR011990; KEGG: wsu:WS0385 hypothetical protein; PFAM: protein of unknown function DUF1566; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: B9CY47 HcpE; PFAM: Protein of unknown function (DUF1566); Sel1 repeat
YP_003655658.1	COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterProIPR006162:IPR018247:IPR018511:IPR019775:IPR 001343:IPR018512:IPR011049; KEGG: mgm:Mmc1_0729 hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding region; SPTR: A0L5K7 Hemolysin-type calcium-binding region
YP_003655659.1	COGs: COG2994 ACP:hemolysin acyltransferase (hemolysin-activating protein); InterPro IPR003996; KEGG: bra:BRADO6927 RTX toxin-activating lysine-acyltransferase (type I secretion system); PFAM: RTX toxin-activating protein C; SPTR: A8TV76 RTX toxin activating acyltransferase; PFAM: RTX toxin acyltransferase family
YP_003655660.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: asa:ASA_0523 outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: A4SIG7 Outer membrane protein TolC; PFAM: Outer membrane efflux protein
YP_003655661.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR005074:IPR001140:IPR003439:IPR 017940:IPR010132:IPR011527; KEGG: hch:HCH_06117 bacteriocin/lantibiotic ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase; SPTR: Q2S9A9 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; TIGRFAM: type I secretion system ABC transporter, HlyB family
YP_003655662.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006144:IPR006143:IPR003997; KEGG: hch:HCH_06116 membrane-fusion protein; PFAM: secretion protein HlyD family protein; SPTR: Q2S9B0 Membrane-fusion protein; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family
YP_003655663.1	COGs: COG4974 Site-specific recombinase XerD; InterProIPR004107:IPR002104:IPR013762:IPR011010:IPR 010998; KEGG: dsa:Desal_3165 integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: C6C215 Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_003655664.1	InterPro IPR000182:IPR016181; KEGG: ttu:TERTU_3337 hypothetical protein; SPTR: C5BQK3 Putative uncharacterized protein
YP_003655665.1	InterPro IPR013216; KEGG: ttu:TERTU_3336 methyltransferase family protein; PFAM: Methyltransferase type 11; SPTR: C5BQK4 Methyltransferase family protein; PFAM: Methyltransferase domain
YP_003655666.1	KEGG: wsu:WS2030 putative integrase; SPTR: Q7MQT2 Putative uncharacterized protein
YP_003655667.1	KEGG: sun:SUN_0023 hypothetical protein; SPTR: A6Q659 Putative uncharacterized protein
YP_003655668.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR005467:IPR004358; KEGG: nam:NAMH_1300 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1ZXM6 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003655669.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_0630 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ESH1 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655670.1	InterPro IPR011871; KEGG: hypothetical protein; SPTR: Q8IE41 Putative uncharacterized protein; TIGRFAM: Fibrobacter succinogenes major paralogous domain
YP_003655671.1	KEGG: mmw:Mmwyl1_0783 glycosyl hydrolase BNR repeat-containing glycosyl hydrolase; SPTR: A6VTD8 Glycosyl hydrolase BNR repeat-containing protein
YP_003655672.1	InterProIPR018511:IPR011659:IPR001343:IPR019960:IPR 011049; KEGG: bam:Bamb_6371 hypothetical protein; PFAM: Hemolysin-type calcium-binding region; WD40 domain protein beta Propeller; SPTR: Q0B1Q8 Putative uncharacterized protein; TIGRFAM: type 1 secretion C-terminal target domain; TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass)
YP_003655673.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: rma:Rmag_0253 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A1AVS8 Outer membrane efflux protein; PFAM: Outer membrane efflux protein
YP_003655674.1	KEGG: u5 small nuclear ribonucleoprotein-specific helicase ; K12854 pre-mRNA-splicing helicase BRR2; SPTR: Q4UB40 U5 small nuclear ribonucleoprotein-specific helicase, putative
YP_003655675.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143:IPR003997; KEGG: cli:Clim_2276 type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; SPTR: B3EHD7 Type I secretion membrane fusion protein, HlyD family; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family
YP_003655676.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003593:IPR003439:IPR017940:IPR011527; KEGG: cli:Clim_2275 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B3EHD6 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter
YP_003655677.1	InterPro IPR016032:IPR011991; KEGG: cff:CFF8240_0140 two component transcriptional regulator; SPTR: A0RMB7 Two component transcriptional regulator, winged helix family; PFAM: Transcriptional regulatory protein, C terminal
YP_003655678.1	COGs: COG3920 Signal transduction histidine kinase; InterPro IPR005467:IPR003594:IPR011623:IPR011495; KEGG: abu:Abu_1163 two-component sensor histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; SPTR: A8ETZ9 Two-component sensor histidine kinase; PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2
YP_003655679.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR011991:IPR001867; KEGG: sun:SUN_2039 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BJ93 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655680.1	COGs: COG2831 Hemolysin activation/secretion protein; InterPro IPR013686:IPR005565; KEGG: wsu:WS0960 hemolysin activation protein HecB; PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; SPTR: Q7MRX6 HECB; PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type
YP_003655681.1	InterProIPR008638:IPR010069:IPR020557:IPR011050:IPR 012334:IPR008619:IPR006915; KEGG: abu:Abu_0940 adhesin/hemagglutinin; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF637 hemagglutinin putative; SPTR: A8ETC6 Adhesin/haemagglutinin, HecA family; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: haemagglutination activity domain; Possible hemagglutinin (DUF637); TIGRFAM: filamentous haemagglutinin family N-terminal domain
YP_003655682.1	KEGG: dhd:Dhaf_0213 membrane protein NosY; SPTR: B6AU87 Trap transporter, 4tm/12tm fusion protein
YP_003655683.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR011251:IPR016048; KEGG: spe:Spro_0498 hypothetical protein; PFAM: Luciferase-like, subgroup; SPTR: C9PGQ1 Putative uncharacterized protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1
YP_003655684.1	KEGG: lbf:LBF_1431 hypothetical protein; SPTR: B0SQD4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3365)
YP_003655685.1	COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: abu:Abu_0183 LrgA family protein; PFAM: LrgA family protein; SPTR: A8ER86 LrgA family protein; PFAM: LrgA family; LrgB-like family
YP_003655686.1	COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300; KEGG: abu:Abu_0184 LrgB-like protein; PFAM: LrgB family protein; SPTR: A8ER87 LrgB-like protein; PFAM: LrgB-like family; TIGRFAM: conserved hypothetical protein TIGR00659
YP_003655687.1	COGs: COG0420 DNA repair exonuclease; InterPro IPR004843; KEGG: sun:SUN_0725 DNA double-strand break repair protein; PFAM: metallophosphoesterase; SPTR: B6BJU0 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD
YP_003655688.1	COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: sun:SUN_0726 DNA double-strand break repair protein; PFAM: SMC domain protein; SPTR: C2A329 RecF/RecN/SMC N-terminal domain-containing protein; PFAM: RecF/RecN/SMC N terminal domain
YP_003655689.1	KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein
YP_003655690.1	KEGG: cac:CAC1143 exodeoxyribonuclease V, alpha subunit, RecD; SPTR: Q97JX9 Exodeoxyribonuclease V, Alpha subunit, RecD
YP_003655691.1	KEGG: pub:SAR11_0551 glycosyl transferase family protein; SPTR: Q4FN67 Glycosyl transferase family
YP_003655692.1	KEGG: sun:SUN_0733 hypothetical protein; SPTR: C2A326 Putative uncharacterized protein
YP_003655693.1	KEGG: nmu:Nmul_A1741 hypothetical protein; SPTR: Q2Y883 Putative uncharacterized protein
YP_003655694.1	KEGG: nmu:Nmul_A1742 hypothetical protein; SPTR: Q2Y882 Putative uncharacterized protein
YP_003655695.1	InterPro IPR009241; KEGG: pph:Ppha_0790 protein of unknown function DUF891; PFAM: protein of unknown function DUF891; SPTR: B4SEJ0 Putative uncharacterized protein; PFAM: Phage derived protein Gp49-like (DUF891)
YP_003655696.1	InterPro IPR001387:IPR010982; KEGG: cch:Cag_0381 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q3ATM1 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix
YP_003655697.1	InterPro IPR011067; KEGG: cjj:CJJ81176_pVir0047 hypothetical protein; SPTR: Q8GJA8 Putative uncharacterized protein Cjp47; PFAM: PemK-like protein
YP_003655698.1	KEGG: sun:SUN_0733 hypothetical protein; SPTR: A6Q883 Putative uncharacterized protein; PFAM: Domain of unknown function(DUF2779)
YP_003655699.1	COGs: COG3129 SAM-dependent methyltransferase; InterPro IPR016909:IPR010286; KEGG: ppr:PBPRB0892 putative SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890; PRIAM: rRNA (adenine-N(6)-)-methyltransferase; SPTR: Q1Z2S2 Hypothetical SAM-dependent methyltransferase; PFAM: Protein of unknown function (DUF890)
YP_003655700.1	COGs: COG2068 Uncharacterized MobA-related protein; KEGG: gfo:GFO_0449 MobA-like molybdenum cofactor biosynthesis protein; SPTR: A3XMJ1 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0007
YP_003655701.1	COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; KEGG: cyt:cce_3338 putative xanthine dehydrogenase accessory factor; SPTR: A3IX62 Putative uncharacterized protein; PFAM: XdhC and CoxI family
YP_003655702.1	COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274:IPR012368:IPR000674; KEGG: mmb:Mmol_1774 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; SPTR: C6WXM9 Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003655703.1	COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR006058:IPR001041:IPR002888; KEGG: dfe:Dfer_3446 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: C6VT11 (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_003655704.1	COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR009057:IPR012287; KEGG: dal:Dalk_2710 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: B8FKN0 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003655705.1	KEGG: bre:BRE_11 hypothetical protein; SPTR: B6BIL8 Putative uncharacterized protein
YP_003655706.1	InterPro IPR010920:IPR006685; KEGG: tdn:Suden_1690 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: B6BHI4 MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel
YP_003655707.1	KEGG: tdn:Suden_0494 hypothetical protein; SPTR: B6BMH0 Putative uncharacterized protein
YP_003655708.1	InterPro IPR001455; KEGG: gka:GK0755 hypothetical protein; SPTR: Q5L1Z0 Putative uncharacterized protein GK0755; PFAM: SirA-like protein
YP_003655709.1	InterPro IPR012312; KEGG: wsu:WS1190 hypothetical protein; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: Q7MRM9 Putative uncharacterized protein; PFAM: Hemerythrin HHE cation binding domain
YP_003655710.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterProIPR000595:IPR012318:IPR018490:IPR001808:IPR 014710; KEGG: abu:Abu_2145 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: A8EWN6 Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain
YP_003655711.1	KEGG: pmx:PERMA_1308 macrophage infection protein, MimD; SPTR: C0QQY3 Macrophage infection protein, MimD
YP_003655712.1	InterPro IPR001387:IPR010982:IPR010744; KEGG: btr:Btr_2646 hypothetical protein; PFAM: CI repressor; SMART: helix-turn-helix domain protein; SPTR: B0PET7 Putative uncharacterized protein; PFAM: Bacteriophage CI repressor helix-turn-helix domain
YP_003655713.1	COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR016037:IPR016303:IPR002658; KEGG: abu:Abu_1125 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: A8ETW1 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_003655714.1	COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR010920:IPR006685; KEGG: abu:Abu_1126 hypothetical protein; PFAM: MscS Mechanosensitive ion channel; SPTR: A8ETW2 Conserved hypothetical integral membrane protein; PFAM: Mechanosensitive ion channel
YP_003655715.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR006467:IPR000385:IPR013848:IPR 006638:IPR013785:IPR007197; KEGG: abu:Abu_1127 MiaB-like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ETW3 MiaB-like tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family
YP_003655716.1	COGs: COG0465 ATP-dependent Zn protease; InterProIPR003960:IPR003593:IPR011546:IPR003959:IPR 000642; KEGG: abu:Abu_1128 cell division protein FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 FtsH extracellular; peptidase M41; SMART: AAA ATPase; SPTR: A8ETW4 Cell division protein FtsH; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_003655717.1	KEGG: abu:Abu_1129 hypothetical protein; SPTR: A8ETW5 Putative uncharacterized protein
YP_003655718.1	COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817:IPR008284:IPR001453; KEGG: son:SO_0065 molybdenum cofactor biosynthesis protein; PFAM: molybdopterin binding domain; SPTR: Q8EKM7 Molybdenum cofactor biosynthesis protein Mog; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_003655719.1	COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: tcx:Tcr_0029 sodium/sulphate symporter; PFAM: sodium/sulphate symporter; SPTR: Q31JP7 Divalent anion: sodium symporter (DASS) family transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_003655720.1	InterPro IPR012336:IPR012335; KEGG: abu:Abu_1055 periplasmic protein; SPTR: A8ETP1 Conserved hypothetical periplasmic protein
YP_003655721.1	COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR002625:IPR005747:IPR007696:IPR000432; KEGG: abu:Abu_1146 recombination and DNA strand exchange inhibitor protein; PFAM: Smr protein/MutS2; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2; SPTR: A8ETY2 Mismatch repair ATPase; PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein
YP_003655722.1	COGs: COG3264 Small-conductance mechanosensitive channel; InterProIPR011066:IPR010920:IPR011014:IPR008910:IPR 006685; KEGG: pca:Pcar_0306 small-conductance mechanosensitive channel; PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; SPTR: Q3A7S8 Small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel; Conserved TM helix
YP_003655723.1	InterPro IPR008023; KEGG: abu:Abu_1149 hypothetical protein; PFAM: protein of unknown function DUF748; SPTR: A8ETY5 Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF748)
YP_003655724.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR005941:IPR001261:IPR011650:IPR002933; KEGG: abu:Abu_1150 succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: A8ETY6 Succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade
YP_003655725.1	InterPro IPR018873; KEGG: gfo:GFO_2160 hypothetical protein; PFAM: KilA-N, DNA-binding domain; SPTR: A0M3D0 Putative uncharacterized protein; PFAM: ORF6N domain
YP_003655726.1	KEGG: amr:AM1_D0075 hypothetical protein; SPTR: C5PTJ5 Putative uncharacterized protein
YP_003655727.1	KEGG: abu:Abu_1139 hypothetical protein; SPTR: A8ETX5 Putative uncharacterized protein; PFAM: Zeta toxin
YP_003655728.1	COGs: COG2859 conserved hypothetical protein; InterPro IPR016907:IPR007497; KEGG: dps:DP0874 hypothetical protein; PFAM: protein of unknown function DUF541; SPTR: Q6APX0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541)
YP_003655729.1	COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001557:IPR015955:IPR016040:IPR001236; KEGG: ckp:ckrop_1700 putative lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: C6PQN3 Lactate/malate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain
YP_003655730.1	COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: abu:Abu_1048 putative sodium:sulfate symporter; PFAM: sodium/sulphate symporter; SPTR: A8ETN4 Putative sodium:sulfate symporter; PFAM: Sodium:sulfate symporter transmembrane region
YP_003655731.1	KEGG: abu:Abu_1043 hypothetical protein; SPTR: A8ETM9 Putative uncharacterized protein
YP_003655732.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1868 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EVY3 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655733.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: wsu:WS1435 putative periplasmic binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Q7M8T0 PUTATIVE PERIPLASMIC BINDING PROTEIN; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003655734.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR005467:IPR003594:IPR009082; KEGG: wsu:WS1436 putative two-component sensor; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q7M8S9 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003655735.1	InterPro IPR009056; KEGG: abu:Abu_1142 cytochrome c-type protein TorC; SPTR: A8ETX8 Cytochrome c-type protein TorC
YP_003655736.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006658:IPR006655:IPR009010:IPR006656:IPR 006657; KEGG: abu:Abu_1143 biotin sulfoxide reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: A8ETX9 Biotin sulfoxide reductase; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases
YP_003655737.1	InterPro IPR011256:IPR010499; KEGG: abu:Abu_1141 hypothetical protein; PFAM: transcription activator effector binding; SPTR: A8ETX7 Putative uncharacterized protein; PFAM: Bacterial transcription activator, effector binding domain
YP_003655738.1	COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: tdn:Suden_0421 transporter, putative; PFAM: Citrate transporter; SPTR: Q30TH9 Transporter, putative; PFAM: Citrate transporter
YP_003655739.1	KEGG: dps:DP1377 hypothetical protein; SPTR: Q6ANG8 Putative uncharacterized protein
YP_003655740.1	COGs: COG1794 Aspartate racemase; InterPro IPR004380:IPR001920:IPR015942; KEGG: pin:Ping_2098 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: A1SWI1 Aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase
YP_003655741.1	COGs: COG2258 conserved hypothetical protein; InterPro IPR005302:IPR011037:IPR015808; KEGG: abu:Abu_1469 hypothetical protein; PFAM: MOSC domain containing protein; SPTR: A8EUV0 Putative uncharacterized protein; PFAM: MOSC domain
YP_003655742.1	KEGG: hypothetical protein; SPTR: A0D458 Chromosome undetermined scaffold_37, whole genome shotgun sequence
YP_003655743.1	KEGG: hau:Haur_0207 hypothetical protein; SPTR: A4CCV2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3095)
YP_003655744.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abu:Abu_1057 hypothetical protein; PFAM: helix-turn-helix HxlR type; SPTR: A8ETP3 Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix
YP_003655745.1	InterPro IPR000620; KEGG: abu:Abu_1061 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8ETP7 Conserved hypothetical integral membrane protein (DUF6 domain protein); PFAM: EamA-like transporter family
YP_003655746.1	COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: abu:Abu_1058 flavodoxin-like fold domain-containing protein; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: A8ETP4 Flavodoxin-like fold domain protein, putative NADPH-quinone reductase; PFAM: Flavodoxin-like fold
YP_003655747.1	COGs: COG0778 Nitroreductase; InterPro IPR000415:IPR016446; KEGG: lba:Lebu_0572 nitroreductase; PFAM: nitroreductase; SPTR: C2A2D6 Nitroreductase; PFAM: Nitroreductase family
YP_003655748.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR002364:IPR011032:IPR016040:IPR013154:IPR 013149; KEGG: cak:Caul_0434 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: B0T5L3 Alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003655749.1	COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: abu:Abu_1059 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: A8ETP5 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase
YP_003655750.1	InterPro IPR011008; KEGG: cbt:CLH_1473 antibiotic biosynthesis monooxygenase; SPTR: B2V0H3 Antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase
YP_003655751.1	COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR013785:IPR001155; KEGG: abu:Abu_1060 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: A8ETP6 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_003655752.1	InterPro IPR000620; KEGG: abu:Abu_1061 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8ETP7 Conserved hypothetical integral membrane protein (DUF6 domain protein); PFAM: EamA-like transporter family
YP_003655753.1	COGs: COG3545 esterase of the alpha/beta hydrolase fold; InterPro IPR010662; KEGG: bsu:BSU05260 alpha/beta hydrolase; PFAM: protein of unknown function DUF1234; SPTR: P96671 Putative hydrolase ydeN; PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234)
YP_003655754.1	COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family; InterPro IPR018211:IPR001670; KEGG: hch:HCH_03787 oxidoreductase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Q2SFQ5 Uncharacterized oxidoreductase, Fe-dependent alcohol dehydrogenase family; PFAM: Iron-containing alcohol dehydrogenase
YP_003655755.1	COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: abu:Abu_1062 NAD(P)H-flavin nitroreductase; PFAM: nitroreductase; SPTR: A8ETP8 NAD(P)H-flavin nitroreductase; PFAM: Nitroreductase family
YP_003655756.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013587; KEGG: abu:Abu_1930 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EW29 Methyl-accepting chemotaxis protein; PFAM: Nitrate and nitrite sensing; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003655757.1	KEGG: abu:Abu_0244 hypothetical protein; SPTR: A8ERE5 Putative uncharacterized protein
YP_003655758.1	COGs: COG0679 permease; InterPro IPR004776; KEGG: cps:CPS_0767 auxin efflux carrier family protein; PFAM: Auxin Efflux Carrier; SPTR: Q488J8 Auxin efflux carrier family protein; PFAM: Membrane transport protein
YP_003655759.1	COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; InterPro IPR003720:IPR001763:IPR004114:IPR020536; KEGG: abu:Abu_1419 thiamine biosynthesis protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain protein; SPTR: A8EUQ0 Thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein (ThiI); Rhodanese-like domain; THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI
YP_003655760.1	KEGG: abu:Abu_1063 hypothetical protein; SPTR: A8ETP9 Putative uncharacterized protein
YP_003655761.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: abu:Abu_1064 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETQ0 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003655762.1	COGs: COG3899 ATPase; InterProIPR000160:IPR000719:IPR011009:IPR002290:IPR 020635:IPR003018:IPR017442; KEGG: ana:all2282 serine/threonine kinase protein; PFAM: GGDEF domain containing protein; Serine/threonine-protein kinase-like domain; GAF domain protein; SMART: GGDEF domain containing protein; serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; GAF domain protein; SPTR: Q8YUQ3 Sensor protein; TIGRFAM: diguanylate cyclase; PFAM: Protein kinase domain; GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655763.1	KEGG: kko:Kkor_1969 hypothetical protein; SPTR: C7R6F1 Putative uncharacterized protein
YP_003655764.1	COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: abu:Abu_1065 acyl-CoA thioester hydrolase family protein; PFAM: thioesterase superfamily protein; SPTR: A8ETQ1 Acyl-CoA thioester hydrolase family protein; PFAM: Thioesterase superfamily
YP_003655765.1	COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterProIPR001679:IPR018239:IPR001357:IPR010994:IPR 016027:IPR013840:IPR003583:IPR012340:IPR013839:IPR004150; KEGG: abu:Abu_1067 NAD-dependent DNA ligase LigA; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; SPTR: A8ETQ3 DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; DNA ligase, NAD-dependent
YP_003655766.1	InterPro IPR013216; KEGG: avn:Avin_39860 methylase; PFAM: Methyltransferase type 11; SPTR: Q0EXI3 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; PFAM: Methyltransferase domain
YP_003655767.1	KEGG: conserved hypothetical protein; SPTR: Q8IKV4 Aminomethyltransferase, putative
YP_003655768.1	InterPro IPR014729:IPR006016; KEGG: cco:CCC13826_0487 ribosomal protein S1; PFAM: UspA domain protein; SPTR: B9D359 Universal stress protein family; PFAM: Universal stress protein family
YP_003655769.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: dtu:Dtur_0537 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B8DZ94 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655770.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR005467:IPR003594:IPR009082:IPR 013727:IPR003660:IPR003661; KEGG: bxe:Bxe_B1046 periplasmic sensor signal transduction histidine kinase, TctE; PFAM: ATP-binding region ATPase domain protein; Two-component sensor kinase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q13LY1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two-component sensor kinase N-terminal
YP_003655771.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: pol:Bpro_4422 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: D0DCC6 Twin-arginine translocation pathway signal; PFAM: Tripartite tricarboxylate transporter family receptor
YP_003655772.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: efe:EFER_0273 hypothetical protein; PFAM: protein of unknown function DUF112 transmembrane; SPTR: A3U0A7 Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctA family
YP_003655773.1	KEGG: dth:DICTH_0028 hypothetical protein; SPTR: A3U0A8 Putative uncharacterized protein
YP_003655774.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: mmw:Mmwyl1_3931 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: D0DCC6 Twin-arginine translocation pathway signal; PFAM: Tripartite tricarboxylate transporter family receptor
YP_003655775.1	COGs: COG3439 conserved hypothetical protein; InterPro IPR005180:IPR016796; KEGG: abu:Abu_1485 hypothetical protein; PFAM: protein of unknown function DUF302; SPTR: A8EUW6 Putative uncharacterized protein; PFAM: Domain of unknown function DUF302
YP_003655776.1	COGs: COG2195 Di- and tripeptidase; InterPro IPR001160; KEGG: abu:Abu_1305 aminoacyl-histidine dipeptidase PepD; PRIAM: Xaa-His dipeptidase; SPTR: A8EUD8 Aminoacyl-histidine dipeptidase PepD; PFAM: Peptidase family M20/M25/M40; TIGRFAM: aminoacyl-histidine dipeptidase
YP_003655777.1	COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR003660:IPR003607:IPR004010:IPR006674; KEGG: dsa:Desal_2677 cache sensor hybrid histidine kinase; PFAM: metal-dependent phosphohydrolase HD sub domain; Cache domain protein; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; SPTR: A6FBR1 Response regulator; PFAM: HD domain; HAMP domain; Cache domain
YP_003655778.1	COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: abu:Abu_1304 cytochrome c biogenesis protein; PFAM: cytochrome c assembly protein; SPTR: A8EUD7 Cytochrome c biogenesis protein; PFAM: Cytochrome C assembly protein; ResB-like family; TIGRFAM: cytochrome c-type biogenesis protein CcsB
YP_003655779.1	InterPro IPR010017; KEGG: abu:Abu_1302 hypothetical protein; PFAM: methyltransferase putative; SPTR: A8EUD5 tRNA (mo5U34)-methyltransferase; PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative
YP_003655780.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_1301 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8EUD4 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655781.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: abu:Abu_1299 beta-lactamase-like protein; SPTR: A8EUD2 Beta-lactamase-like protein; PFAM: Metallo-beta-lactamase superfamily
YP_003655782.1	COGs: COG2833 conserved hypothetical protein; InterPro IPR011197:IPR007402; KEGG: abu:Abu_1298 hypothetical protein; PFAM: protein of unknown function DUF455; SPTR: A8EUD1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF455)
YP_003655783.1	KEGG: hypothetical protein; SPTR: B7ADH7 Putative uncharacterized protein
YP_003655784.1	COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: abu:Abu_0830 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; SPTR: A8ET21 EAL domain protein; PFAM: EAL domain
YP_003655785.1	COGs: COG0259 Pyridoxamine-phosphate oxidase; InterProIPR000659:IPR019740:IPR009002:IPR012349:IPR 011576:IPR019576; KEGG: abu:Abu_1541 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: A8EV17 Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase
YP_003655786.1	KEGG: abu:Abu_1203 hypothetical protein; SPTR: A8EU39 Putative uncharacterized protein
YP_003655787.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: abu:Abu_1204 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: A8EU40 Cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_003655788.1	COGs: COG3496 conserved hypothetical protein; InterPro IPR010775; KEGG: abu:Abu_1205 hypothetical protein; PFAM: protein of unknown function DUF1365; SPTR: A8EU41 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1365)
YP_003655789.1	COGs: COG2907 NAD/FAD-binding protein; InterPro IPR006076; KEGG: abu:Abu_1206 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: A8EU42 Putative uncharacterized protein; PFAM: Flavin containing amine oxidoreductase
YP_003655790.1	COGs: COG3040 Bacterial lipocalin; InterPro IPR002446:IPR011038:IPR012674:IPR013208; KEGG: abu:Abu_1207 lipoprotein; PFAM: Lipocalin family protein; SPTR: A8EU43 Conserved hypothetical lipoprotein; PFAM: Lipocalin-like domain
YP_003655791.1	COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR016196:IPR011701; KEGG: abu:Abu_1208 sugar transporter, putative; PFAM: major facilitator superfamily MFS_1; SPTR: A8EU44 Sugar transporter, putative; PFAM: Major Facilitator Superfamily
YP_003655792.1	KEGG: ctt:CtCNB1_1919 hypothetical protein; SPTR: B6QZH3 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2358)
YP_003655793.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198:IPR002347:IPR016040; KEGG: abu:Abu_1209 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8EU45 Oxidoreductase, short chain dehydrogenase/reductase family; PFAM: short chain dehydrogenase
YP_003655794.1	COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR006654:IPR006653:IPR001926; KEGG: abu:Abu_1295 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8EUC8 Tryptophan synthase, beta chain; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_003655795.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR004358:IPR005467:IPR003594:IPR 009082:IPR001638; KEGG: abu:Abu_1360 two-component sensor histidine kinase; PFAM: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; SPTR: A8EUJ2 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003655796.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR012724:IPR018253:IPR003095:IPR001623:IPR 001305:IPR008971:IPR002939; KEGG: abu:Abu_1294 co-chaperone and heat shock protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8EUC7 Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_003655797.1	COGs: COG0353 Recombinational DNA repair protein (RecF pathway); InterPro IPR000093:IPR015967; KEGG: abu:Abu_1293 recombination protein RecR; PFAM: Zinc finger C4-type, RecR; SPTR: A8EUC6 Recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: RecR protein; TIGRFAM: recombination protein RecR
YP_003655798.1	KEGG: afl:Aflv_2769 uncharacterized protein contains CXXC motif; SPTR: B7GMM0 Uncharacterized protein contains CXXC motif
YP_003655799.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR005467:IPR003594:IPR009082:IPR 003661; KEGG: nam:NAMH_0746 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A6DBS2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003655800.1	InterPro IPR014871; KEGG: abu:Abu_1292 deoxyuridinetriphosphatase; PFAM: dUTPase; SPTR: A8EUC5 Deoxyuridinetriphosphatase; PFAM: dUTPase
YP_003655801.1	COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR003016:IPR011606; KEGG: pin:Ping_3724 AzlC family protein; PFAM: AzlC family protein; SPTR: C3RLA2 Putative uncharacterized protein; PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_003655802.1	COGs: COG1687 branched-chain amino acid permease (azaleucine resistance); InterPro IPR008407; KEGG: mba:Mbar_A2617 branched chain amino acid transport protein AzlD; PFAM: branched-chain amino acid transport; SPTR: Q469B6 Branched chain amino acid transport protein AzlD; PFAM: Branched-chain amino acid transport protein (AzlD)
YP_003655803.1	COGs: COG2848 conserved hypothetical protein; InterPro IPR007841; KEGG: ctt:CtCNB1_4537 hypothetical protein; PFAM: protein of unknown function DUF711; SPTR: A7JPS3 Putative uncharacterized protein; PFAM: Uncharacterized ACR (DUF711)
YP_003655804.1	InterPro IPR016181; KEGG: sun:SUN_0924 acetyltransferase; SPTR: A6Q8S3 Acetyltransferase, GNAT family
YP_003655805.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR018490:IPR014710:IPR000595; KEGG: hau:Haur_2655 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SPTR: A3YEP1 Catabolite gene activator protein; PFAM: Cyclic nucleotide-binding domain
YP_003655806.1	COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR011004:IPR001451; KEGG: abu:Abu_1285 hypothetical protein; SPTR: A8EUB8 Putative uncharacterized protein
YP_003655807.1	COGs: COG2866 carboxypeptidase; InterPro IPR000834:IPR003961:IPR008957; KEGG: nis:NIS_0893 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: B6BMD1 Peptidase M14, carboxypeptidase A; PFAM: Zinc carboxypeptidase
YP_003655808.1	COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR010994:IPR003583:IPR013651; KEGG: nis:NIS_0892 hypothetical protein; PFAM: RimK domain protein ATP-grasp; SPTR: A6Q3E5 Putative uncharacterized protein; PFAM: RimK-like ATP-grasp domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_003655809.1	COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761:IPR013816:IPR013651; KEGG: sun:SUN_1052 hypothetical protein; PFAM: RimK domain protein ATP-grasp; SPTR: A6Q950 Putative uncharacterized protein; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family
YP_003655810.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261:IPR011650:IPR017150:IPR002933; KEGG: sun:SUN_1051 carboxypeptidase G2; PFAM: peptidase dimerisation domain protein; peptidase M20; SPTR: B6BMC9 Peptidase dimerisation domain protein; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_003655811.1	COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518:IPR018223:IPR014729; KEGG: abu:Abu_1279 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: A8EUB2 Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_003655812.1	COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: abu:Abu_1278 S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: A8EUB1 S4 domain protein; PFAM: S4 domain
YP_003655813.1	COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR005940:IPR000312; KEGG: abu:Abu_1276 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: A8EUA9 Anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_003655814.1	COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: abu:Abu_1275 hypothetical protein; PFAM: protein of unknown function UPF0079; SPTR: A8EUA8 Putative uncharacterized protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein
YP_003655815.1	COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: abu:Abu_1274 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8EUA7 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003655816.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR000160:IPR001789:IPR011006; KEGG: afl:Aflv_1936 response regulator with a diguanylate cyclase output domain; PFAM: response regulator receiver; GGDEF domain containing protein; SMART: response regulator receiver; GGDEF domain containing protein; SPTR: B6BN46 Response regulator PleD; TIGRFAM: diguanylate cyclase; PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655817.1	COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR004528:IPR003329; KEGG: abu:Abu_1272 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: A8EUA5 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase
YP_003655818.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR004358:IPR005467:IPR000700:IPR 003594:IPR009082:IPR001610:IPR013767:IPR013655; KEGG: tdn:Suden_0986 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Q30RW7 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box
YP_003655819.1	COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR018320:IPR019760:IPR002298:IPR012337:IPR 020045:IPR002421:IPR008918:IPR002562:IPR001098:IPR020046:I PR020047; KEGG: abu:Abu_1270 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; PRIAM: DNA-directed DNA polymerase; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; SPTR: A8EUA3 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I
YP_003655820.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1269 two-component response regulator; PFAM: response regulator receiver; SPTR: A8EUA2 Two-component response regulator; PFAM: Response regulator receiver domain
YP_003655821.1	KEGG: abu:Abu_1268 hypothetical protein; SPTR: A8EUA1 Putative uncharacterized protein
YP_003655822.1	KEGG: abu:Abu_0122 hypothetical protein; SPTR: A8ER33 Putative uncharacterized protein; PFAM: Uncharacterized protein containing a Zn-ribbon (DUF2116)
YP_003655823.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR001789:IPR000700:IPR011006:IPR 001610:IPR013767; KEGG: tdn:Suden_0281 multi-sensor signal transduction histidine kinase; PFAM: response regulator receiver; PAS fold domain protein; SMART: response regulator receiver; PAC repeat-containing protein; SPTR: A8V332 DIGUANYLATE CYCLASE; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003655824.1	COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: abu:Abu_1267 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: A8EUA0 Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_003655825.1	COGs: COG0247 Fe-S oxidoreductase; InterProIPR017900:IPR017896:IPR009051:IPR012257:IPR 012285:IPR001450:IPR004017; KEGG: abu:Abu_1266 anaerobic glycerol-3-phosphate dehydrogenase, subunit C (GlpC); PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EU99 Anaerobic glycerol-3-phosphate dehydrogenase, subunit C (GlpC); PFAM: Cysteine-rich domain
YP_003655826.1	COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterProIPR004558:IPR006638:IPR013785:IPR007197:IPR 010723; KEGG: abu:Abu_1245 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EU78 Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase
YP_003655827.1	COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR002292:IPR006130:IPR006132:IPR006131; KEGG: abu:Abu_1244 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; SPTR: A8EU77 Ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_003655828.1	COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR012833:IPR005144; KEGG: abu:Abu_1243 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein; SPTR: A8EU76 Oxygen-sensitive ribonucleoside-triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase
YP_003655829.1	KEGG: abu:Abu_1242 hypothetical protein; SPTR: A8EU75 Putative uncharacterized protein
YP_003655830.1	COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012840:IPR007197; KEGG: abu:Abu_1241 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A8EU74 Radical SAM domain protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein
YP_003655831.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1240 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EU73 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003655832.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR004358:IPR005467:IPR003594; KEGG: tdn:Suden_1243 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B6BNA5 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003655833.1	InterPro IPR000014:IPR000700:IPR001610:IPR013655; KEGG: abu:Abu_1239 two-component sensor histidine kinase; PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein; SPTR: A8EU72 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box
YP_003655834.1	COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731:IPR013785; KEGG: abu:Abu_1238 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: A8EU71 Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase
YP_003655835.1	COGs: COG0807 GTP cyclohydrolase II; InterPro IPR000926; KEGG: cco:CCC13826_0883 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; PRIAM: GTP cyclohydrolase II; SPTR: A7ZCL6 GTP cyclohydrolase-2; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II
YP_003655836.1	COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682; KEGG: abu:Abu_1236 16S rRNA methyltransferase GidB; PFAM: glucose inhibited division protein; SPTR: A8EU69 Ribosomal RNA small subunit methyltransferase G; TIGRFAM: methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB
YP_003655837.1	KEGG: abu:Abu_1235 hypothetical protein; SPTR: A8EU68 Putative uncharacterized protein; PFAM: Prokaryotic metallothionein
YP_003655838.1	KEGG: abu:Abu_1234 hypothetical protein; SPTR: A8EU67 Putative uncharacterized protein
YP_003655839.1	KEGG: abu:Abu_1233 hypothetical protein; SPTR: A8EU66 Putative uncharacterized protein
YP_003655840.1	COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR015944:IPR002311:IPR006194; KEGG: abu:Abu_1232 glycyl-tRNA synthetase subunit beta; PFAM: glycyl-tRNA synthetase beta subunit; PRIAM: Glycine--tRNA ligase; SPTR: A8EU65 Glycyl-tRNA synthetase, beta chain; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit
YP_003655841.1	InterPro IPR012556; KEGG: abu:Abu_1722 hypothetical protein; PFAM: Entericidin EcnAB; SPTR: A8EVJ6 Putative uncharacterized protein; PFAM: Entericidin EcnA/B family
YP_003655842.1	KEGG: tdn:Suden_1228 uroporphyrinogen-III synthase; SPTR: Q30R75 Uroporphyrinogen-III synthase
YP_003655843.1	COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR004509:IPR003583:IPR000445; KEGG: tdn:Suden_0339 hypothetical protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: C8N8I2 Competence protein CelA; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_003655844.1	COGs: COG3613 Nucleoside 2-deoxyribosyltransferase; InterPro IPR007710; KEGG: bav:BAV3392 nucleoside 2-deoxyribosyltransferase; PFAM: nucleoside 2-deoxyribosyltransferase; SPTR: B6BP01 Nucleoside 2-deoxyribosyltransferase; PFAM: Nucleoside 2-deoxyribosyltransferase
YP_003655845.1	COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: tdn:Suden_1228 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Q30R75 Uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen-III synthase HemD
YP_003655846.1	KEGG: hypothetical protein; SPTR: Q245H8 Putative uncharacterized protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_003655847.1	KEGG: hypothetical protein; SPTR: A3HUF2 Putative uncharacterized protein
YP_003655848.1	InterPro IPR001387:IPR010982; KEGG: amt:Amet_4400 XRE family plasmid maintenance system antidote protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: A6TK93 Plasmid maintenance system antidote protein, XRE family; PFAM: Helix-turn-helix
YP_003655849.1	KEGG: conserved hypothetical protein; SPTR: O97278 ABC transporter, putative
YP_003655850.1	KEGG: nis:NIS_0461 hypothetical protein; SPTR: A6Q266 Phage-related protein
YP_003655851.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR013762:IPR002104; KEGG: nam:NAMH_1173 phage integrase; PFAM: integrase family protein; SPTR: B9LAB1 Phage integrase; PFAM: Phage integrase family
YP_003655852.1	KEGG: gfo:GFO_0393 hyalin domain-containing protein; SPTR: Q7UA22 Putative uncharacterized protein
YP_003655853.1	KEGG: sab:SAB2254c hypothetical protein; SPTR: Q2YZ10 Probable membrane protein
YP_003655854.1	KEGG: hya:HY04AAS1_0302 hypothetical protein; SPTR: B4U781 Putative uncharacterized protein
YP_003655855.1	COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR014729:IPR011063; KEGG: cbk:CLL_A2764 putative aminotransferase, class V; PFAM: PP-loop domain protein; SPTR: B2TNZ5 Putative aminotransferase, class V; PFAM: Phosphoadenosine phosphosulfate reductase family
YP_003655856.1	KEGG: cha:CHAB381_1569 hypothetical protein; SPTR: C2Q4Y4 Putative uncharacterized protein
YP_003655857.1	KEGG: mmy:MSC_0803 alkylphosphonate ABC transporter, ATP-binding component; SPTR: Q6MSH1 Alkylphosphonate ABC transporter, ATP-binding component
YP_003655858.1	InterPro IPR002196; KEGG: syf:Synpcc7942_0756 chain A, D20c mutant of T4 lysozyme; PFAM: glycoside hydrolase family 24; SPTR: B0VF72 Lysozyme; PFAM: Phage lysozyme
YP_003655859.1	KEGG: hypothetical protein ; K02555 M-phase inducer tyrosine phosphatase
YP_003655860.1	KEGG: hypothetical protein; SPTR: A0CJG7 Chromosome undetermined scaffold_2, whole genome shotgun sequence
YP_003655861.1	KEGG: mcl:MCCL_0364 hypothetical protein; SPTR: C6MGK9 Peptidase M23
YP_003655862.1	KEGG: DNA-directed RNA polymerase, omega subunit family protein; SPTR: Q23DH8 DNA-directed RNA polymerase, omega subunit family protein
YP_003655863.1	KEGG: pct:PC1_2526 methyl-accepting chemotaxis sensory transducer; SPTR: C9LTG5 Putative autotransporter beta-domain protein
YP_003655864.1	KEGG: hypothetical protein; SPTR: A2D959 Putative uncharacterized protein
YP_003655865.1	KEGG: mch:Mchl_0889 penicillin-binding protein, 1A family; SPTR: Q4PZI0 Reticulocyte binding protein 2
YP_003655866.1	KEGG: hypothetical protein ; K03124 transcription initiation factor TFIIB; SPTR: A8YBR7 Similar to tr|Q3M5L8|Q3M5L8_ANAVT Hypothetical protein
YP_003655867.1	KEGG: snm:SP70585_1587 G5 domain family; SPTR: C4FQK8 Putative uncharacterized protein
YP_003655868.1	KEGG: hypothetical protein; SPTR: Q58N19 Putative uncharacterized protein
YP_003655869.1	KEGG: hypothetical protein; SPTR: A8RA76 Putative uncharacterized protein
YP_003655870.1	COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterProIPR000422:IPR010916:IPR017945:IPR016299:IPR 000926; KEGG: abu:Abu_1228 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: A8EU64 Bifunctional GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_003655871.1	KEGG: cno:NT01CX_0851 sensor histidine kinase; SPTR: B1BTE1 Putative uncharacterized protein
YP_003655872.1	COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR001272:IPR015994:IPR008210:IPR013035; KEGG: abu:Abu_1227 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); PRIAM: Phosphoenolpyruvate carboxykinase (ATP); SPTR: A8EU63 Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP)
YP_003655873.1	COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: tdn:Suden_1258 pyruvate carboxylase/oxaloacetate decarboxylase biotin carboxyl carrier subunit alpha; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; PRIAM: Oxaloacetate decarboxylase; SPTR: Q30R45 Pyruvate carboxylase/oxaloacetate decarboxylase biotin carboxyl carrier (Alpha) subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit
YP_003655874.1	COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterProIPR001882:IPR000089:IPR000891:IPR011053:IPR 013785; KEGG: abu:Abu_1226 pyruvate/oxaloacetate carboxyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; PRIAM: Pyruvate carboxylase; SPTR: A8ER79 Pyruvate/oxaloacetate carboxyltransferase; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain
YP_003655875.1	InterPro IPR005899; KEGG: sun:SUN_1434 Na+-transporting oxaloacetate decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; SPTR: B6BN70 Oxaloacetate decarboxylase gamma chain; TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit
YP_003655877.1	COGs: COG2932 transcriptional regulator protein; InterPro IPR019756:IPR015927:IPR011056:IPR019759; KEGG: abu:Abu_1223 S24 family peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: A8EU59 Peptidase, S24 family; PFAM: Peptidase S24-like
YP_003655878.1	InterPro IPR000713; KEGG: abu:Abu_1222 hypothetical protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; SPTR: A8EU58 Putative uncharacterized protein
YP_003655879.1	COGs: COG0143 Methionyl-tRNA synthetase; InterProIPR002304:IPR004495:IPR014758:IPR002547:IPR 016027:IPR009080:IPR014729:IPR012340:IPR015413; KEGG: abu:Abu_1221 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; SPTR: A8EU57 Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase
YP_003655880.1	KEGG: abu:Abu_1220 hypothetical protein; SPTR: A8EU56 Putative uncharacterized protein
YP_003655881.1	COGs: COG0158 Fructose-1 6-bisphosphatase; InterPro IPR000146; KEGG: abu:Abu_1219 fructose-1,6-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase; PRIAM: Fructose-bisphosphatase; SPTR: A8EU55 Fructose-1,6-bisphosphatase class 1; PFAM: Fructose-1-6-bisphosphatase
YP_003655882.1	COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: abu:Abu_1218 molybdopterin-guanine dinucleotide biosynthesis protein; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; SPTR: A8EU54 Molybdopterin-guanine dinucleotide biosynthesis protein; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB
YP_003655883.1	KEGG: abu:Abu_1217 hypothetical protein; SPTR: A8EU53 Putative uncharacterized protein
YP_003655884.1	KEGG: abu:Abu_1216 soluble lytic murein transglycosylase (slt); SPTR: A8EU52 Soluble lytic murein transglycosylase (Slt); PFAM: Transglycosylase SLT domain
YP_003655885.1	InterPro IPR003425; KEGG: abu:Abu_1215 hypothetical protein; PFAM: protein of unknown function YGGT; SPTR: A8EU51 Conserved hypothetical membrane protein; PFAM: YGGT family
YP_003655886.1	COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR004527:IPR020060:IPR008925:IPR020061:IPR 020058; KEGG: abu:Abu_1214 glutamylglutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: A8EU50 Glutamyl-tRNA synthetase 2; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_003655887.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011249:IPR011237:IPR011765:IPR007863; KEGG: abu:Abu_1213 M16 family peptidase; PFAM: peptidase M16 domain protein; SPTR: A8EU49 Peptidase, M16 family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_003655888.1	COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050:IPR005244:IPR013785:IPR007197; KEGG: abu:Abu_1212 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: A8EU48 SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily
YP_003655889.1	COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR001412:IPR010827:IPR000184; KEGG: abu:Abu_1211 outer membrane surface antigen protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: A8EU47 Outer membrane surface antigen protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein
YP_003655890.1	COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099:IPR016040; KEGG: abu:Abu_1210 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: A8EU46 Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase
YP_003655891.1	COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390:IPR000489:IPR011005; KEGG: abu:Abu_1202 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: A8EU38 Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_003655892.1	KEGG: abu:Abu_1201 putative DNA polymerase III delta prime subunit HolB; SPTR: A8EU37 Putative DNA polymerase III delta prime subunit HolB
YP_003655893.1	KEGG: abu:Abu_1200 hypothetical protein; SPTR: A8EU36 Putative uncharacterized protein; PFAM: DNA replication regulator
YP_003655894.1	COGs: COG0527 Aspartokinase; InterProIPR005260:IPR001341:IPR018042:IPR001048:IPR 002912; KEGG: abu:Abu_1199 aspartokinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: A8EU35 Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_003655895.1	InterPro IPR020084:IPR020476:IPR015797:IPR000086; KEGG: abu:Abu_1198 dinucleoside polyphosphate hydrolase; PFAM: NUDIX hydrolase; SPTR: A8EU34 (Di)nucleoside polyphosphate hydrolase; PFAM: NUDIX domain
YP_003655896.1	COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterProIPR004559:IPR006638:IPR013785:IPR007197:IPR 010723; KEGG: abu:Abu_1197 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EU33 Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase
YP_003655897.1	COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR004556:IPR002052:IPR007848; KEGG: abu:Abu_1196 modification methylase; PFAM: methyltransferase small; SPTR: A8EU32 Modification methylase; TIGRFAM: modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_003655898.1	COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: abu:Abu_1195 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: A8EU31 Oligopeptidase A; PFAM: Peptidase family M3; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003655899.1	KEGG: abu:Abu_1194 hypothetical protein; SPTR: A8EU30 Putative uncharacterized protein
YP_003655900.1	KEGG: abu:Abu_1193 hypothetical protein; SPTR: A8EU29 Putative uncharacterized protein
YP_003655901.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR000215:IPR011010:IPR013762:IPR002104; KEGG: abu:Abu_1191 integrase/recombinase XerD; PFAM: integrase family protein; SPTR: A8EU27 Integrase/recombinase XerD; PFAM: Phage integrase family
YP_003655902.1	COGs: COG3515 conserved hypothetical protein; InterPro IPR010657; KEGG: vfm:VFMJ11_1088 type VI secretion-associated protein, family; PFAM: ImpA domain protein; SPTR: B5FD91 Type VI secretion-associated protein, family; PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, VC_A0119 family
YP_003655903.1	COGs: COG3516 conserved hypothetical protein; InterPro IPR008312; KEGG: vfm:VFMJ11_A0823 type VI secretion protein, family; PFAM: conserved hypothetical protein; SPTR: B5EUK4 Type VI secretion protein, family; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family
YP_003655904.1	COGs: COG3517 conserved hypothetical protein; InterPro IPR010269; KEGG: pst:PSPTO_5432 hypothetical protein; PFAM: protein of unknown function DUF877; SPTR: Q87U76 Putative uncharacterized protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family
YP_003655905.1	COGs: COG3518 conserved hypothetical protein; InterPro IPR017737:IPR007048; KEGG: pen:PSEEN0525 hypothetical protein; PFAM: GPW/gp25 family protein; SPTR: Q1IFT1 Putative uncharacterized protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein
YP_003655906.1	COGs: COG3519 conserved hypothetical protein; InterPro IPR010272; KEGG: pen:PSEEN0526 hypothetical protein; PFAM: protein of unknown function DUF879; SPTR: Q1IFT0 Putative uncharacterized protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family
YP_003655907.1	COGs: COG3520 conserved hypothetical protein; InterPro IPR010732; KEGG: tau:Tola_0198 type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; SPTR: C4L829 Type VI secretion protein, VC_A0111 family; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family
YP_003655908.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017729:IPR018368:IPR001270:IPR003593:IPR 003959:IPR013093:IPR019489; KEGG: vfi:VF_0999 ATP-dependent protease subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: Q5E652 ATP-dependent protease subunit; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family
YP_003655910.1	COGs: COG3456 conserved hypothetical protein contains FHA domain; InterPro IPR017735:IPR000253:IPR008984; KEGG: vfi:VF_0997 phospho-specific protein-protein interaction motif-containing protein; PFAM: Forkhead-associated protein; SPTR: Q5E654 Phospho-specific protein-protein interaction motif FHA; TIGRFAM: type VI secretion system FHA domain protein; PFAM: FHA domain; TIGRFAM: type VI secretion system FHA domain protein
YP_003655911.1	COGs: COG3521 conserved hypothetical protein; InterPro IPR017734; KEGG: vex:VEA_000013 type VI secretion lipoprotein/VasD; SPTR: Q1VBV4 Putative uncharacterized protein; TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; TIGRFAM: type VI secretion lipoprotein, VC_A0113 family
YP_003655912.1	COGs: COG3522 conserved hypothetical protein; InterPro IPR010263; KEGG: vfm:VFMJ11_1077 type VI secretion protein, family; PFAM: protein of unknown function DUF876; SPTR: Q5E656 Putative uncharacterized protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family
YP_003655913.1	COGs: COG3455 conserved hypothetical protein; InterPro IPR017732; KEGG: vsa:VSAL_I1114 putative type VI secretion protein VasF; PFAM: Type IV / VI secretion system, DotU; SPTR: B6EJ68 Putative type VI secretion protein VasF; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family
YP_003655914.1	COGs: COG3523 conserved hypothetical protein; InterPro IPR017731:IPR016160:IPR009612:IPR010623; KEGG: vfi:VF_0993 secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; SPTR: Q5E658 Secretion protein IcmF; TIGRFAM: type VI secretion protein IcmF; PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing; TIGRFAM: type VI secretion protein IcmF
YP_003655915.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932; KEGG: pen:PSEEN0536 serine/threonine phosphoprotein phosphatase Stp1; SMART: protein phosphatase 2C domain protein; SPTR: Q1IFS0 Serine/threonine phosphoprotein phosphatase Stp1; PFAM: Protein phosphatase 2C
YP_003655916.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719:IPR011009:IPR020635:IPR002290:IPR 017442; KEGG: ppr:PBPRA0657 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Q6LUE7 Hypothetical serine/threonine protein kinase; PFAM: Protein kinase domain
YP_003655917.1	COGs: COG3157 Hemolysin-coregulated protein (uncharacterized); InterPro IPR017728:IPR008514; KEGG: vfm:VFMJ11_A1070 hemolysin co-regulated protein; PFAM: protein of unknown function DUF796; SPTR: Q5DYX2 Hemolysin co-regulated protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_003655918.1	COGs: COG3501 conserved hypothetical protein; InterPro IPR017847:IPR006533; KEGG: vfi:VF_1229 VgrG protein; PFAM: Rhs element Vgr protein; SPTR: Q5E5H2 VgrG protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Phage-related baseplate assembly protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein
YP_003655919.1	COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterProIPR019734:IPR013026:IPR006597:IPR011990:IPR 001440; KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; TPR repeat-containing protein; SPTR: B3ESM2 Putative uncharacterized protein; PFAM: Sel1 repeat; Tetratricopeptide repeat
YP_003655920.1	InterPro IPR018712; KEGG: chu:CHU_0711 hypothetical protein; PFAM: Protein of unknown function DUF2235; SPTR: A3JFP8 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2235)
YP_003655921.1	COGs: COG3501 conserved hypothetical protein; InterPro IPR017847:IPR006533; KEGG: vfi:VF_1229 VgrG protein; PFAM: Rhs element Vgr protein; SPTR: Q5E5H2 VgrG protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Phage-related baseplate assembly protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein
YP_003655922.1	KEGG: ppr:PBPRB0091 hypothetical protein; SPTR: C4SID2 Putative uncharacterized protein
YP_003655923.1	KEGG: fph:Fphi_1917 hypothetical protein; SPTR: C3WJ13 COME operon protein 3
YP_003655924.1	KEGG: cac:CAC3279 ChW repeat-containing protein; SPTR: Q97E37 Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats; PFAM: Leucine Rich Repeat
YP_003655925.1	KEGG: cha:CHAB381_0153 Cpp12; SPTR: A7HZS1 Cpp12
YP_003655926.1	KEGG: conserved hypothetical protein; SPTR: C0H520 RNB-like protein, putative
YP_003655927.1	KEGG: cbe:Cbei_3742 hypothetical protein; SPTR: C3WCT0 Predicted protein
YP_003655928.1	COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR001789:IPR000673:IPR011006:IPR008248; KEGG: abu:Abu_1188 protein-glutamate methylesterase CheB; PFAM: CheB methylesterase; response regulator receiver; PRIAM: Protein-glutamate methylesterase; SMART: response regulator receiver; SPTR: A8EU24 Protein-glutamate methylesterase CheB; PFAM: CheB methylesterase; Response regulator receiver domain
YP_003655929.1	COGs: COG1871 Chemotaxis protein; stimulates methylation of MCP protein; InterPro IPR005659; KEGG: abu:Abu_1187 chemotaxis protein CheD; PFAM: CheD family protein; SPTR: A8EU23 Chemotaxis protein CheD; PFAM: CheD
YP_003655930.1	COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: abu:Abu_1186 chemotaxis protein methyltransferase; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: A8EU22 Chemotaxis protein methyltransferase; PFAM: CheR methyltransferase, SAM binding domain
YP_003655931.1	COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR004358:IPR005467:IPR002545:IPR008207:IPR 003594:IPR009082:IPR004105; KEGG: abu:Abu_1185 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; PRIAM: Histidine kinase; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; SPTR: A8EU21 Chemotaxis protein CheA; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_003655932.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1184 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EU20 Chemotaxis protein CheY; PFAM: Response regulator receiver domain
YP_003655933.1	COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterProIPR012162:IPR004088:IPR003029:IPR020568:IPR 015847:IPR016027:IPR015848:IPR004087:IPR012340:IPR001247:I PR018111; KEGG: abu:Abu_1183 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: A8EU19 Polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase
YP_003655934.1	COGs: COG1926 phosphoribosyltransferase; KEGG: abu:Abu_1182 hypothetical protein; SPTR: A8EU18 Putative uncharacterized protein; PFAM: Phosphoribosyl transferase domain
YP_003655935.1	COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR007543; KEGG: abu:Abu_1181 hypothetical protein; PFAM: Organic solvent tolerance protein; SPTR: A8EU17 Conserved hypothetical membrane protein; PFAM: Organic solvent tolerance protein
YP_003655936.1	InterPro IPR010432; KEGG: abu:Abu_1180 hypothetical protein; PFAM: RDD domain containing protein; SPTR: A8EU16 Putative uncharacterized protein; PFAM: RDD family
YP_003655937.1	COGs: COG0151 Phosphoribosylamine-glycine ligase; InterProIPR000115:IPR020559:IPR011761:IPR016185:IPR 011054:IPR013817:IPR013815:IPR013816:IPR020560:IPR020562:I PR020561; KEGG: abu:Abu_1179 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: A8EU15 Phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_003655938.1	COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: abu:Abu_1177 putative uroporphyrinogen III cosynthase HemD; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: A8EU13 Putative uroporphyrinogen III cosynthase HemD; PFAM: Uroporphyrinogen-III synthase HemD
YP_003655939.1	COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR002645:IPR011547; KEGG: abu:Abu_1176 sulfate permease family protein; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: A8EU12 Sulfate permease family protein; PFAM: Sulfate transporter family; STAS domain
YP_003655940.1	COGs: COG1160 GTPase; InterPro IPR005225:IPR016484:IPR006073:IPR002917; KEGG: abu:Abu_1175 GTP-binding protein EngA; PFAM: GTP-binding protein HSR1-related; SPTR: A8EU11 GTP-binding protein; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; GTP-binding protein Era; small GTP-binding protein domain
YP_003655941.1	COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: abu:Abu_1174 hypothetical protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; SPTR: A8EU10 Putative uncharacterized protein; TIGRFAM: ribosomal subunit interface protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_003655942.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR003593:IPR018541; KEGG: abu:Abu_1159 cell division protein FtsK; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: A8ETZ5 Cell division protein FtsK; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_003655943.1	COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterProIPR007691:IPR016160:IPR018294:IPR011004:IPR 020573:IPR001451; KEGG: abu:Abu_1158 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; SPTR: A8ETZ4 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_003655944.1	COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789:IPR002912:IPR019455; KEGG: abu:Abu_1157 acetolactate synthase 3 regulatory subunit; PFAM: amino acid-binding ACT domain protein; Acetolactate synthase, small subunit-like; SPTR: A8ETZ3 Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit
YP_003655945.1	COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterProIPR012846:IPR000399:IPR012001:IPR012000:IPR 011766; KEGG: abu:Abu_1156 acetolactate synthase 3 catalytic subunit; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A8ETZ2 Acetolactate synthase, large subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_003655946.1	KEGG: abu:Abu_1155 hypothetical protein; SPTR: A8ETZ1 Putative uncharacterized protein; PFAM: Bacterial flagellin N-terminal helical region
YP_003655947.1	COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: abu:Abu_1154 Ppx/GppA phosphatase family protein; PFAM: Ppx/GppA phosphatase; SPTR: A8ETZ0 Ppx/GppA phosphatase family protein; PFAM: Ppx/GppA phosphatase family
YP_003655948.1	COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462; KEGG: abu:Abu_1153 CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: A8ETY9 CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_003655949.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: tdn:Suden_1511 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q30QE3 Diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003655950.1	InterPro IPR010930; KEGG: abu:Abu_0538 hypothetical protein; PFAM: protein of unknown function DUF1078 domain protein; SPTR: A8ES81 Putative uncharacterized protein
YP_003655951.1	COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR005746:IPR017937:IPR006662:IPR017936:IPR 012336:IPR012335:IPR013766; KEGG: tdn:Suden_2099 thioredoxin; PFAM: Thioredoxin domain; SPTR: Q30NQ8 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_003655952.1	COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR012089:IPR014729:IPR011063; KEGG: abu:Abu_0536 hypothetical protein; PFAM: PP-loop domain protein; SPTR: A8ES79 Putative uncharacterized protein; PFAM: PP-loop family
YP_003655953.1	KEGG: abu:Abu_0535 hypothetical protein; SPTR: A8ES78 Putative uncharacterized protein
YP_003655954.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090:IPR004089; KEGG: abu:Abu_1066 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ETQ2 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655955.1	COGs: COG0069 Glutamate synthase domain 2; InterPro IPR013785:IPR002932; KEGG: sun:SUN_1986 hypothetical protein; PFAM: ferredoxin-dependent glutamate synthase; SPTR: A6QBS0 Putative uncharacterized protein; PFAM: Conserved region in glutamate synthase
YP_003655956.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR016160:IPR001412:IPR016161:IPR016162:IPR 002872:IPR015590; KEGG: dal:Dalk_3943 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; SPTR: B8FJG0 Aldehyde Dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family
YP_003655957.1	COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: dat:HRM2_04910 LivF2; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0QHP7 LivF2; PFAM: ABC transporter
YP_003655958.1	COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: dps:DP2487 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1SMM8 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_003655959.1	COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dat:HRM2_04930 LivM2; PFAM: inner-membrane translocator; SPTR: C1SMM7 ABC-type branched-chain amino acid transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component
YP_003655960.1	COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dps:DP2489 high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); PFAM: inner-membrane translocator; SPTR: Q6AKA8 Probable high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); PFAM: Branched-chain amino acid transport system / permease component
YP_003655961.1	COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: dat:HRM2_04950 LivJ2; PFAM: Extracellular ligand-binding receptor; SPTR: C1SMM5 Amino acid-binding protein; PFAM: Receptor family ligand binding region
YP_003655962.1	KEGG: dma:DMR_24750 hypothetical protein; SPTR: C4XTG9 Putative uncharacterized protein
YP_003655963.1	KEGG: hypothetical protein; SPTR: C6RM66 Putative uncharacterized protein
YP_003655964.1	InterPro IPR000630:IPR000620; KEGG: maq:Maqu_2825 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A3Y9B2 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_003655965.1	InterPro IPR014729:IPR006016; KEGG: cff:CFF8240_1256 hypothetical protein; PFAM: UspA domain protein; SPTR: B9D359 Universal stress protein family; PFAM: Universal stress protein family
YP_003655966.1	COGs: COG2206 HD-GYP domain; KEGG: abu:Abu_0579 hypothetical protein; SPTR: A8ESC2 Putative uncharacterized protein
YP_003655967.1	KEGG: abu:Abu_0576 hypothetical protein; SPTR: A8ESB9 Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold
YP_003655968.1	COGs: COG1416 conserved hypothetical protein; InterPro IPR014865; KEGG: abu:Abu_0575 hypothetical protein; PFAM: Domain of unknown function DUF1791; SPTR: A8ESB8 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_003655969.1	InterPro IPR005302:IPR011037; KEGG: abu:Abu_0574 hypothetical protein; SPTR: A8ESB7 Putative uncharacterized protein
YP_003655970.1	InterPro IPR017937:IPR017936:IPR012336:IPR012335; KEGG: abu:Abu_0573 hypothetical protein; SPTR: A8ESB6 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255
YP_003655971.1	COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006311:IPR006179:IPR008334; KEGG: abu:Abu_0572 sulfur oxidation protein, sulfate thiol esterase; PFAM: 5'-Nucleotidase domain protein; SPTR: A8ESB5 Sulfur oxidation protein, sulfate thiol esterase; PFAM: 5'-nucleotidase, C-terminal domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003655972.1	InterPro IPR001763; KEGG: tbd:Tbd_1650 rhodanese-like protein; SMART: Rhodanese domain protein; SPTR: Q2BMW9 Rhodanese-like protein; PFAM: Rhodanese-like domain
YP_003655973.1	KEGG: abu:Abu_0571 hypothetical protein; SPTR: A8ESB4 Putative uncharacterized protein
YP_003655974.1	InterPro IPR009056; KEGG: abu:Abu_0570 sulfur oxidation protein SoxXA, diheme cytochrome c subunit; SPTR: A8ESB3 Sulfur oxidation protein SoxXA, diheme cytochrome c subunit
YP_003655975.1	InterPro IPR014880; KEGG: abu:Abu_0569 sulfur oxidation protein SoxYZ, sulfur compound chelating protein; PFAM: Sulphur oxidation protein SoxZ; SPTR: A8ESB2 Sulfur oxidation protein SoxYZ, sulfur compound chelating protein; PFAM: Sulphur oxidation protein SoxZ
YP_003655976.1	COGs: COG5501 secreted protein; InterPro IPR017441:IPR016568; KEGG: abu:Abu_0568 sulfur oxidation protein SoxYZ, sulfur covalently binding protein; SPTR: A8ESB1 Sulfur oxidation protein SoxYZ, sulfur covalently binding protein
YP_003655977.1	InterPro IPR009056:IPR003088; KEGG: abu:Abu_0567 sulfur oxidation protein SoxXA, monoheme cytochrome c subunit; PFAM: cytochrome c class I; SPTR: A8ESB0 Sulfur oxidation protein SoxXA, monoheme cytochrome c subunit; PFAM: Cytochrome c; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003655978.1	COGs: COG3245 Cytochrome c5; InterPro IPR002323:IPR009056:IPR003088; KEGG: abu:Abu_0566 sulfur oxidation protein SoxCD, diheme cytochrome c subunit; PFAM: cytochrome c class I; SPTR: A8ESA9 Sulfur oxidation protein SoxCD, diheme cytochrome c subunit; PFAM: Cytochrome c
YP_003655979.1	COGs: COG2041 Sulfite oxidase; InterProIPR008335:IPR000572:IPR014756:IPR005066:IPR 006311:IPR017909; KEGG: abu:Abu_0565 sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; SPTR: A8ESA8 Sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain
YP_003655980.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR005110:IPR001453:IPR005111:IPR020817; KEGG: abu:Abu_0534 molybdenum cofactor biosynthesis protein A; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: A8ES77 Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); TIGRFAM: molybdenum cofactor synthesis domain
YP_003655981.1	KEGG: nam:NAMH_1238 hypothetical protein; SPTR: B9L5J2 Putative uncharacterized protein
YP_003655982.1	KEGG: sbn:Sbal195_4548 hypothetical protein; SPTR: A9L6C3 Putative uncharacterized protein
YP_003655983.1	COGs: COG0701 permease; InterPro IPR005524; KEGG: nis:NIS_0906 hypothetical protein; PFAM: permease; SPTR: A6Q3F8 Putative uncharacterized protein; PFAM: Predicted permease; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_003655984.1	COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: abu:Abu_0532 DNA recombination protein RmuC-like protein; PFAM: protein of unknown function DUF195; SPTR: A8ES75 DNA recombination protein RmuC-like protein; PFAM: RmuC family
YP_003655985.1	COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: abu:Abu_0531 M48 family peptidase; PFAM: peptidase M48 Ste24p; PRIAM: Ste24 endopeptidase; SPTR: A8ES74 Peptidase, M48 family; PFAM: Peptidase family M48
YP_003655986.1	COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: abu:Abu_0530 nuclease NucT; SPTR: A8ES73 Putative uncharacterized protein; PFAM: Archaeal transcriptional regulator TrmB
YP_003655987.1	COGs: COG0824 thioesterase; InterPro IPR006683:IPR008272:IPR006684; KEGG: abu:Abu_0529 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: A8ES72 Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051; tol-pal system-associated acyl-CoA thioesterase
YP_003655988.1	KEGG: gur:Gura_1470 hypothetical protein; SPTR: A5GE14 Putative uncharacterized protein
YP_003655990.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR016040:IPR006153:IPR003148; KEGG: app:CAP2UW1_2844 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; SPTR: Q0EYD2 Potassium efflux system protein; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: potassium efflux system protein
YP_003655991.1	COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family; InterPro IPR001670:IPR000623; KEGG: abu:Abu_0784 iron-containing NADP-dependent alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: A8ESX5 Iron-containing NADP-dependent alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase
YP_003655992.1	KEGG: hypothetical protein ; K10866 DNA repair protein RAD50; SPTR: Q6CUR2 KLLA0C02915p
YP_003655993.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: abu:Abu_0526 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: A8ES69 Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003655994.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR002345; KEGG: abu:Abu_0524 aldo/keto reductase family oxidoreductase TAS; PFAM: aldo/keto reductase; SPTR: A8ES67 Oxidoreductase Tas, aldo/keto reductase family; PFAM: Aldo/keto reductase family
YP_003655995.1	COGs: COG1275 Tellurite resistance protein and related permease; InterPro IPR004695; KEGG: abu:Abu_0523 C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; SPTR: A8ES66 C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein
YP_003655996.1	KEGG: tdn:Suden_0311 hypothetical protein; SPTR: Q30TT9 Putative uncharacterized protein
YP_003655997.1	COGs: COG0368 Cobalamin-5-phosphate synthase; InterPro IPR003805; KEGG: abu:Abu_2181 cobalamin (vitamin B12) synthase; PFAM: cobalamin-5-phosphate synthase CobS; SPTR: A8EWS2 Cobalamin (Vitamin B12) synthase; PFAM: Cobalamin-5-phosphate synthase
YP_003655998.1	COGs: COG1492 Cobyric acid synthase; InterPro IPR002586:IPR011698:IPR004459:IPR017929; KEGG: aci:ACIAD1071 cobyric acid synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; SPTR: Q43989 Cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ
YP_003655999.1	COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: abu:Abu_2182 bifunctional cobinamide kinase / cobinamide phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; SPTR: A8EWS3 Bifunctional cobinamide kinase / Cobinamide phosphate guanylyltransferase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase
YP_003656000.1	COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: ppd:Ppro_1334 multiple antibiotic resistance (MarC)-related proteins; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: C2A2E2 Putative uncharacterized protein; PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427
YP_003656001.1	COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR003200; KEGG: abu:Abu_2184 hypothetical protein; SPTR: A8EWS5 Putative uncharacterized protein; PFAM: Phosphoribosyltransferase; TIGRFAM: conserved hypothetical protein TIGR00303
YP_003656002.1	COGs: COG2334 Putative homoserine kinase type II (protein kinase fold); InterPro IPR011009:IPR002575; KEGG: emi:Emin_0858 homoserine kinase; PFAM: aminoglycoside phosphotransferase; SPTR: B6BH72 Phosphotransferase enzyme family, putative; PFAM: Phosphotransferase enzyme family
YP_003656003.1	COGs: COG0778 Nitroreductase; InterPro IPR000415:IPR012825; KEGG: shl:Shal_0741 cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; SPTR: B6BH73 Cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase
YP_003656004.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR015424:IPR004839:IPR015421:IPR015422; KEGG: fma:FMG_1150 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: B6BH71 L-threonine-O-3-phosphate decarboxylase, putative; PFAM: Aminotransferase class I and II
YP_003656005.1	COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB; InterPro IPR004485; KEGG: dfe:Dfer_5371 cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; SPTR: B6BH68 Cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD
YP_003656006.1	COGs: COG1797 Cobyrinic acid a c-diamide synthase; InterPro IPR011698:IPR017929; KEGG: lmf:LMOf2365_1200 cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; SPTR: Q4EKY5 Cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase
YP_003656007.1	COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: abu:Abu_1104 putative iron compound ABC transporter, permease protein; PFAM: transport system permease protein; SPTR: A8ETU0 Putative iron compound ABC transporter, permease protein; PFAM: FecCD transport family
YP_003656008.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: abu:Abu_1103 putative iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETT9 Putative iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003656009.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: abu:Abu_1102 putative iron compound ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein; SPTR: A8ETT8 Putative iron compound ABC transporter, periplasmic substrate-binding protein; PFAM: Periplasmic binding protein
YP_003656010.1	COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: abu:Abu_1101 TonB-dependent receptor protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: A8ETT7 TonB-dependent receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor
YP_003656011.1	KEGG: abu:Abu_1100 hypothetical protein; SPTR: A8ETT6 Putative uncharacterized protein
YP_003656012.1	KEGG: sun:SUN_1591 hypothetical protein; SPTR: A6QAN2 Putative uncharacterized protein
YP_003656013.1	COGs: COG0546 phosphatase; InterPro IPR005834:IPR006402:IPR006439; KEGG: abu:Abu_1097 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8ETT3 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_003656014.1	COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterProIPR020103:IPR006145:IPR018496:IPR000748:IPR 002942; KEGG: abu:Abu_1096 ribosomal small subunit pseudouridine synthase A; PFAM: pseudouridine synthase; SPTR: A8ETT2 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase family
YP_003656015.1	InterPro IPR003538:IPR006260; KEGG: nis:NIS_1422 periplasmic protein TonB; PFAM: Gram-negative tonB protein; SPTR: A6Q4X0 Periplasmic protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_003656016.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: abu:Abu_0704 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ESP5 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2
YP_003656017.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898:IPR014172; KEGG: abu:Abu_0705 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8ESP6 Biopolymer transport protein ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2
YP_003656018.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR005467; KEGG: abu:Abu_1084 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ETS0 Two-component sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003656019.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1083 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ETR9 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656020.1	COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841; KEGG: tdn:Suden_0962 Na+/Pi-cotransporter; PFAM: Na+/Picotransporter; SPTR: Q30RZ1 Na+/Pi-cotransporter; PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter
YP_003656021.1	KEGG: abu:Abu_1079 hypothetical protein; SPTR: A8ETR5 Putative uncharacterized protein
YP_003656022.1	COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537:IPR016914; KEGG: abu:Abu_1078 RNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: A8ETR4 RNA methylase, SpoU family; PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2
YP_003656023.1	COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR004810:IPR002376; KEGG: abu:Abu_1077 formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; SPTR: A8ETR3 Formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase
YP_003656024.1	COGs: COG0281 Malic enzyme; InterPro IPR016040:IPR012301:IPR012302:IPR015884; KEGG: abu:Abu_1076 NAD-dependent malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating); SPTR: A8ETR2 NAD-dependent malic enzyme; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_003656025.1	COGs: COG1496 conserved hypothetical protein; InterPro IPR011324:IPR003730; KEGG: abu:Abu_1075 hypothetical protein; PFAM: protein of unknown function DUF152; SPTR: A8ETR1 Putative uncharacterized protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726
YP_003656026.1	COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR016040:IPR013708:IPR006151:IPR011342; KEGG: abu:Abu_1073 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: A8ETQ9 Shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_003656027.1	InterPro IPR000297; KEGG: nis:NIS_0561 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: A6Q2G6 Peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain
YP_003656028.1	InterPro IPR011031; KEGG: ccv:CCV52592_0434 hydroxylamine oxidase; SPTR: C8PH55 Hydroxylamine oxidase; PFAM: NapC/NirT cytochrome c family, N-terminal region
YP_003656029.1	COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR005126:IPR011031; KEGG: cff:CFF8240_0799 putative tetraheme cytochrome c; PFAM: NapC/NirT cytochrome c domain protein; SPTR: A0RP41 Putative tetraheme Cytochrome c; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit
YP_003656030.1	InterPro IPR019758; KEGG: abu:Abu_1069 hypothetical protein; SPTR: A8ETQ5 Conserved hypothetical lipoprotein
YP_003656031.1	COGs: COG0754 Glutathionylspermidine synthase; InterPro IPR005494; KEGG: abu:Abu_1068 glutathionylspermidine synthase family protein; PFAM: glutathionylspermidine synthase; SPTR: A8ETQ4 Glutathionylspermidine synthase family protein; PFAM: Glutathionylspermidine synthase
YP_003656032.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003661:IPR003594:IPR009082:IPR 013163:IPR005467; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EV12 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003656033.1	KEGG: son:SO_4333 hypothetical protein; SPTR: Q8E9F1 Putative uncharacterized protein
YP_003656034.1	COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; InterPro IPR003758; KEGG: abu:Abu_1248 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: A8EU81 Tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase
YP_003656035.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR000653:IPR015421:IPR015422; KEGG: abu:Abu_1249 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8EU82 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003656036.1	COGs: COG0171 NAD synthase; InterPro IPR003694:IPR014729; KEGG: abu:Abu_1250 NH(3)-dependent NAD+ synthetase; PFAM: NAD synthase; PRIAM: NAD(+) synthase; SPTR: A8EU83 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase
YP_003656037.1	KEGG: abu:Abu_1251 hypothetical protein; SPTR: A8EU84 Putative uncharacterized protein
YP_003656038.1	InterPro IPR007419; KEGG: abu:Abu_1252 hypothetical protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: A8EU85 Putative uncharacterized protein; PFAM: BFD-like [2Fe-2S] binding domain
YP_003656039.1	InterPro IPR007419; KEGG: abu:Abu_1252 hypothetical protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: A8EU85 Putative uncharacterized protein; PFAM: BFD-like [2Fe-2S] binding domain
YP_003656040.1	InterPro IPR001623; KEGG: abu:Abu_1253 DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8EU86 DnaJ domain protein; PFAM: DnaJ domain; Tellurite resistance protein TerB
YP_003656041.1	InterPro IPR003998:IPR003369:IPR018448; KEGG: abu:Abu_1255 hypothetical protein; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: A8EU88 Conserved hypothetical membrane protein; TIGRFAM: twin-arginine translocation protein, TatB subunit; TIGRFAM: twin arginine-targeting protein translocase TatB
YP_003656042.1	COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR002033:IPR019820:IPR019822; KEGG: abu:Abu_1256 sec-independent protein secretion pathway component TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: A8EU89 Sec-independent protein secretion pathway component TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_003656043.1	COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: abu:Abu_1257 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: A8EU90 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_003656044.1	COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055:IPR012337:IPR013520; KEGG: abu:Abu_1258 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: A8EU91 DNA polymerase III, epsilon subunit; PFAM: Exonuclease
YP_003656045.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1762 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EVN5 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656046.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR004358:IPR003594:IPR005467; KEGG: abu:Abu_1761 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8EVN4 Sensor protein; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003656047.1	COGs: COG0348 Polyferredoxin; InterPro IPR017900:IPR014116:IPR017896; KEGG: abu:Abu_1760 ferredoxin-like protein; SPTR: A8EVN3 Ferredoxin-like protein; TIGRFAM: cytochrome c oxidase accessory protein CcoG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG
YP_003656048.1	COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: wsu:WS0746 transmembrane transport protein; PFAM: sodium:neurotransmitter symporter; SPTR: Q7M9R0 Transporter; PFAM: Sodium:neurotransmitter symporter family
YP_003656049.1	InterPro IPR004477; KEGG: abu:Abu_1260 competence locus E; PFAM: ComEC/Rec2-related protein; SPTR: A8EU93 Competence locus E; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein
YP_003656050.1	COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR013217; KEGG: abu:Abu_1262 hypothetical protein; PFAM: protein of unknown function DUF323; Methyltransferase type 12; SPTR: A8EU95 Putative uncharacterized protein; PFAM: Methyltransferase domain; Formylglycine-generating sulfatase enzyme
YP_003656051.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: tcx:Tcr_1009 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Q31GW9 ADP-ribosylglycohydrolase family protein; PFAM: ADP-ribosylglycohydrolase
YP_003656052.1	COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: abu:Abu_0364 S-adenosylmethionine:2-demethylmenaquinone methyltransferase; PFAM: Dimethylmenaquinone methyltransferase; SPTR: B6BJG0 Regulator of ribonuclease activity A; PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy
YP_003656053.1	COGs: COG2008 Threonine aldolase; InterPro IPR015424:IPR001597:IPR015421:IPR015422; KEGG: dps:DP1003 low-specificity L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: Q6APJ2 Probable low-specificity L-threonine aldolase; PFAM: Beta-eliminating lyase
YP_003656054.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: abu:Abu_0912 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: A8ET98 Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold
YP_003656055.1	COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding); InterPro IPR006158; KEGG: sun:SUN_1085 methylaspartate mutase subunit S; PFAM: cobalamin B12-binding domain protein; SPTR: B7RTT7 B12 binding domain, putative; PFAM: B12 binding domain; TIGRFAM: methylaspartate mutase, S subunit
YP_003656056.1	COGs: COG4865 Glutamate mutase epsilon subunit; InterPro IPR016176:IPR006396:IPR014348; KEGG: sun:SUN_1086 methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit; PRIAM: Methylaspartate mutase; SPTR: B7RTT8 Methylaspartate mutase E chain (MutE) superfamily protein; PFAM: Methylaspartate mutase E chain (MutE); TIGRFAM: methylaspartate mutase, E subunit
YP_003656057.1	KEGG: sun:SUN_1087 hypothetical protein; SPTR: B6BJF7 Putative uncharacterized protein
YP_003656058.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: sun:SUN_1088 hypothetical protein; PFAM: AMP-dependent synthetase and ligase; SPTR: B6BJF6 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme
YP_003656059.1	COGs: COG2863 Cytochrome c553; InterPro IPR009056; KEGG: abu:Abu_1316 putative cytochrome c; SPTR: A8EUE9 Putative uncharacterized protein; PFAM: Cytochrome c
YP_003656060.1	InterPro IPR009056; KEGG: abu:Abu_1316 putative cytochrome c; SPTR: A8EUE9 Putative uncharacterized protein; PFAM: Cytochrome c
YP_003656061.1	COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: abu:Abu_1273 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A8EUA6 EAL/GGDEF domain protein; PFAM: EAL domain; GGDEF domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003656062.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_1317 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A6C9P7 Probable response regulatory protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003656063.1	InterPro IPR000064; KEGG: abu:Abu_1318 hypothetical protein; PFAM: NLP/P60 protein; SPTR: A8EUF1 Putative uncharacterized protein; PFAM: NlpC/P60 family
YP_003656064.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: tdn:Suden_0799 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Q30SF3 Resistance-Nodulation-Cell Division Superfamily transporter; PFAM: AcrB/AcrD/AcrF family
YP_003656065.1	KEGG: abu:Abu_1319 hypothetical protein; SPTR: A8EUF2 Putative uncharacterized protein
YP_003656066.1	COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: abu:Abu_1320 S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; SPTR: A8EUF3 S-adenosyl-L-methionine-dependent methyltransferase mraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_003656067.1	InterPro IPR001303; KEGG: abu:Abu_1321 hypothetical protein; PFAM: class II aldolase/adducin family protein; SPTR: A8EUF4 Putative uncharacterized protein; PFAM: Class II Aldolase and Adducin N-terminal domain
YP_003656068.1	COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR010992:IPR018727:IPR017441; KEGG: abu:Abu_1322 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; Protein of unknown function DUF2267; SMART: histone family protein DNA-binding protein; SPTR: A8EUF5 DNA-binding protein HU; PFAM: Bacterial DNA-binding protein
YP_003656069.1	InterPro IPR008816; KEGG: abu:Abu_1111 hypothetical protein; PFAM: 17 kDa surface antigen; SPTR: A8ETU7 Putative uncharacterized protein
YP_003656070.1	COGs: COG2863 Cytochrome c553; InterPro IPR008168:IPR009056:IPR003088; KEGG: abu:Abu_1919 cytochrome c; PFAM: cytochrome c class I; SPTR: B6BHK9 Cytochrome c, class I; PFAM: Cytochrome c
YP_003656071.1	KEGG: abu:Abu_1110 hypothetical protein; SPTR: A8ETU6 Putative uncharacterized protein
YP_003656072.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR009082:IPR005467; KEGG: abu:Abu_1109 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ETU5 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003656073.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1108 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BHK7 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656074.1	KEGG: abu:Abu_1107 hypothetical protein; SPTR: A8ETU3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1104)
YP_003656075.1	KEGG: cjd:JJD26997_0694 hypothetical protein; SPTR: C8PIL8 Putative uncharacterized protein
YP_003656076.1	KEGG: cak:Caul_1030 hypothetical protein; SPTR: C6X810 Putative uncharacterized protein
YP_003656077.1	COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR004564; KEGG: abu:Abu_1309 outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: A8EUE2 Outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA
YP_003656078.1	COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR000185:IPR001650:IPR011116:IPR011130:IPR 011115:IPR004027:IPR014018; KEGG: abu:Abu_1310 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SEC-C motif domain protein; SMART: helicase domain protein; SPTR: A8EUE3 Protein translocase subunit secA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; Helicase conserved C-terminal domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_003656079.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: abu:Abu_1311 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: A8EUE4 Conserved hypothetical integral membrane protein; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family
YP_003656080.1	KEGG: abu:Abu_1312 hypothetical protein; SPTR: A8EUE5 Putative uncharacterized protein
YP_003656081.1	COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: abu:Abu_1313 4-amino-4-deoxychorismate lyase PabC; PFAM: aminodeoxychorismate lyase; SPTR: A8EUE6 4-amino-4-deoxychorismate lyase PabC; PFAM: YceG-like family
YP_003656082.1	COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: abu:Abu_1314 isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: A8EUE7 Isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type
YP_003656083.1	COGs: COG0039 Malate/lactate dehydrogenase; InterProIPR001557:IPR015955:IPR016040:IPR001236:IPR 011275; KEGG: abu:Abu_1315 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; PRIAM: L-lactate dehydrogenase; SPTR: A8EUE8 Malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent
YP_003656084.1	KEGG: spl:Spea_1548 hypothetical protein; SPTR: A8H2T6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3478)
YP_003656085.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: dat:HRM2_37860 DraG2; PFAM: ADP-ribosylation/Crystallin J1; SPTR: B6BJW2 ADP-ribosylglycohydrolase family protein, putative; PFAM: ADP-ribosylglycohydrolase
YP_003656086.1	COGs: COG0605 Superoxide dismutase; InterPro IPR001189:IPR019832:IPR019831:IPR019833; KEGG: abu:Abu_1576 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: A8EV51 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_003656087.1	KEGG: abu:Abu_1355 hypothetical protein; SPTR: A8EUI7 Putative uncharacterized protein
YP_003656088.1	COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: abu:Abu_1356 D-amino acid oxidase domain-containing protein; PFAM: FAD dependent oxidoreductase; SPTR: A8EUI8 D-amino acid oxidase domain protein; PFAM: FAD dependent oxidoreductase
YP_003656089.1	KEGG: abu:Abu_1357 hypothetical protein; SPTR: A8EUI9 Putative uncharacterized protein
YP_003656090.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR003095:IPR001623:IPR008971:IPR002939:IPR 018253; KEGG: abu:Abu_1361 curved DNA-binding protein CbpA; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: A8EUJ3 Curved DNA-binding protein CbpA; PFAM: DnaJ C terminal region; DnaJ domain
YP_003656091.1	InterPro IPR000551:IPR009061; KEGG: abu:Abu_1362 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: A8EUJ4 Transcriptional regulator (MerR family), putative heat shock regulator HspR; PFAM: MerR family regulatory protein
YP_003656092.1	COGs: COG0206 Cell division GTPase; InterProIPR000158:IPR019746:IPR008280:IPR003008:IPR 018316; KEGG: abu:Abu_1379 cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: A8EUL0 Cell division protein ftsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_003656093.1	COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494:IPR020823; KEGG: abu:Abu_1380 cell division protein FtsA; PFAM: cell division protein FtsA; SPTR: A8EUL1 Cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA
YP_003656094.1	KEGG: abu:Abu_1381 hypothetical protein; SPTR: A8EUL2 Conserved hypothetical membrane protein
YP_003656095.1	COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003593:IPR010994; KEGG: abu:Abu_1382 exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase; SPTR: A8EUL3 Exodeoxyribonuclease V, alpha subunit; PFAM: Viral (Superfamily 1) RNA helicase; TIGRFAM: helicase, putative, RecD/TraA family
YP_003656096.1	KEGG: abu:Abu_1383 hypothetical protein; SPTR: A8EUL4 Putative uncharacterized protein
YP_003656097.1	COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR012336:IPR006660:IPR012335:IPR006659; KEGG: sun:SUN_1478 arsenate reductase; PFAM: arsenate reductase and related; SPTR: A6QAC0 Arsenate reductase; TIGRFAM: arsenate reductase; PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin)
YP_003656098.1	KEGG: abu:Abu_1388 hypothetical protein; SPTR: A8EUL9 Conserved hypothetical membrane protein; PFAM: Flagellar hook-length control protein FliK
YP_003656099.1	COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; InterPro IPR006135; KEGG: abu:Abu_1389 FlhB domain-containing protein; PFAM: type III secretion exporter; SPTR: A8EUM0 FlhB domain protein; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein
YP_003656100.1	KEGG: abu:Abu_0997 hypothetical protein; SPTR: A8ETI3 Putative uncharacterized protein
YP_003656101.1	COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR001460:IPR017790; KEGG: abu:Abu_0996 penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: A8ETI2 Penicillin-binding protein; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_003656102.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090:IPR004089; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003656103.1	InterPro IPR013655:IPR000014; KEGG: tdn:Suden_1652 putative PAS/PAC sensor protein; PFAM: PAS fold-3 domain protein; SPTR: B6BJB5 Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box
YP_003656104.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: nam:NAMH_0588 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: B9L8P6 Extracellular solute-binding protein, family 3; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003656105.1	COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838:IPR005837; KEGG: abu:Abu_0995 flagellar biosynthesis protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: A8ETI1 Flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP
YP_003656106.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013163; KEGG: abu:Abu_1984 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EW83 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003656107.1	InterPro IPR013655:IPR000014; KEGG: abu:Abu_0960 methyl-accepting chemotaxis protein; PFAM: PAS fold-3 domain protein; SPTR: A8ETE6 Methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box
YP_003656108.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0993 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A8ETH9 Outer membrane efflux protein; PFAM: Outer membrane efflux protein
YP_003656109.1	InterPro IPR013105:IPR011990:IPR019734:IPR013026; KEGG: abu:Abu_0929 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: A8ETB5 Putative uncharacterized protein
YP_003656110.1	KEGG: abu:Abu_0930 hypothetical protein; SPTR: A8ETB6 Putative uncharacterized protein; PFAM: FecR protein
YP_003656111.1	COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR016181:IPR000182; KEGG: abu:Abu_0982 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: A8ETG8 Acetyltransferase, GNAT Family; PFAM: Acetyltransferase (GNAT) family
YP_003656112.1	COGs: COG0218 GTPase; InterPro IPR002917:IPR019987; KEGG: abu:Abu_0981 putative ATP/GTP binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: A8ETG7 Probable GTP-binding protein engB; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB
YP_003656113.1	COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: abu:Abu_0980 OstA family protein; PFAM: OstA family protein; SPTR: A8ETG6 OstA family protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA
YP_003656114.1	InterPro IPR010664; KEGG: abu:Abu_0979 hypothetical protein; PFAM: protein of unknown function DUF1239; SPTR: A8ETG5 Putative uncharacterized protein
YP_003656115.1	COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR013200:IPR010023:IPR006549; KEGG: abu:Abu_0978 HAD-superfamily phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: A8ETG4 HAD-superfamily hydrolase subfamily IIIA:Phosphatase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA
YP_003656116.1	COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR020568:IPR000807:IPR020565; KEGG: abu:Abu_0977 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: A8ETG3 Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase
YP_003656117.1	COGs: COG0797 Lipoprotein; InterPro IPR009009:IPR005132:IPR007730:IPR012997; KEGG: nis:NIS_0776 hypothetical protein; PFAM: Rare lipoprotein A; Sporulation domain protein; SPTR: A6Q329 Putative uncharacterized protein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A
YP_003656118.1	InterPro IPR002482:IPR008258:IPR018392; KEGG: nam:NAMH_1200 regulatory protein DniR; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: B6BJH7 Lytic transglycosylase, catalytic; PFAM: Transglycosylase SLT domain; LysM domain
YP_003656119.1	COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR012278:IPR018228:IPR015991; KEGG: abu:Abu_0974 TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: A8ETG0 TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_003656120.1	KEGG: abu:Abu_0973 hypothetical protein; SPTR: A8ETF9 Putative uncharacterized protein
YP_003656121.1	COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR003593:IPR013093:IPR004491; KEGG: abu:Abu_0972 ATP-dependent protease ATP-binding subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; SPTR: A8ETF8 Heat shock protein HslVU, ATP-dependent protease subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU
YP_003656122.1	COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: abu:Abu_0971 ATP-dependent protease peptidase subunit; PFAM: 20S proteasome A and B subunits; SPTR: A8ETF7 ATP-dependent protease hslV; PFAM: Proteasome subunit
YP_003656123.1	COGs: COG0359 Ribosomal protein L9; InterPro IPR020069:IPR009027:IPR020070:IPR020594; KEGG: abu:Abu_0970 50S ribosomal protein L9; PFAM: Ribosomal protein L9-like; SPTR: A8ETF6 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_003656124.1	COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119; KEGG: abu:Abu_0969 resolvase family site-specific recombinase; PFAM: Resolvase domain; SPTR: A8ETF5 Site-specific recombinase, resolvase family; PFAM: Resolvase, N terminal domain
YP_003656125.1	COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR003382:IPR004507; KEGG: abu:Abu_0968 phenylacrylic acid decarboxylase; PFAM: flavoprotein; SPTR: A8ETF4 Phenylacrylic acid decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases
YP_003656126.1	COGs: COG0669 Phosphopantetheine adenylyltransferase; InterPro IPR001980:IPR004820:IPR014729:IPR004821; KEGG: abu:Abu_0967 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: A8ETF3 Phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_003656127.1	COGs: COG0125 Thymidylate kinase; InterPro IPR000062:IPR018095:IPR018094; KEGG: abu:Abu_0966 thymidylate kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: A8ETF2 Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_003656128.1	COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR004154:IPR002314:IPR004516:IPR015807:IPR 006195; KEGG: abu:Abu_0965 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: A8ETF1 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_003656129.1	COGs: COG1166 Arginine decarboxylase (spermidine biosynthesis); InterPro IPR002985:IPR000183; KEGG: abu:Abu_0964 arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: A8ETF0 Arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic
YP_003656130.1	COGs: COG1045 Serine acetyltransferase; InterPro IPR011004:IPR001451:IPR018357:IPR005881; KEGG: abu:Abu_0963 serine acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM: Serine O-acetyltransferase; SPTR: A8ETE9 Serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase
YP_003656131.1	InterPro IPR002781; KEGG: ccv:CCV52592_1682 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: A7H071 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE
YP_003656132.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014001:IPR001650:IPR011545:IPR000629:IPR 014021:IPR014014; KEGG: tdn:Suden_1945 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: C1ZXL0 DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003656133.1	COGs: COG1048 Aconitase A; InterProIPR001030:IPR015928:IPR000573:IPR015931:IPR 015932; KEGG: ilo:IL1533 aconitate hydratase; PFAM: aconitate hydratase domain protein; SPTR: A3WK89 Aconitate hydratase; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_003656134.1	COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR010920:IPR011066:IPR011014:IPR006685; KEGG: wsu:WS0996 hypothetical protein; PFAM: MscS Mechanosensitive ion channel; SPTR: Q7MRW3 Putative uncharacterized protein; PFAM: Mechanosensitive ion channel
YP_003656135.1	COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439:IPR017871:IPR004602; KEGG: abu:Abu_0958 excinuclease ABC subunit A; PFAM: ABC transporter related; SPTR: A8ETE4 Excinuclease ABC, subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_003656136.1	KEGG: tdn:Suden_0048 hypothetical protein; SPTR: C1ZY85 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF309)
YP_003656137.1	KEGG: abu:Abu_0957 hypothetical protein; SPTR: A8ETE3 Putative uncharacterized protein
YP_003656138.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550; KEGG: cpb:Cphamn1_1595 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; SPTR: B3EK89 Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21
YP_003656139.1	KEGG: abu:Abu_0910 hypothetical protein; SPTR: A8ET96 Putative uncharacterized protein
YP_003656140.1	COGs: COG3148 conserved hypothetical protein; InterPro IPR005636; KEGG: ote:Oter_3739 DTW domain-containing protein; PFAM: DTW domain containing protein; SPTR: Q26CH3 Putative uncharacterized protein; PFAM: DTW domain
YP_003656141.1	KEGG: abu:Abu_0952 hypothetical protein; SPTR: A8ETD8 Putative uncharacterized protein
YP_003656142.1	InterPro IPR016196:IPR011701; KEGG: abu:Abu_0933 major facilitator superfamily protein, putative oxalate:formate antiporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8ETB9 Major facilitator superfamily protein, putative oxalate:formate antiporter; PFAM: Major Facilitator Superfamily
YP_003656143.1	KEGG: pin:Ping_1659 hypothetical protein; SPTR: A1SVD7 Putative uncharacterized protein
YP_003656144.1	COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR019614; KEGG: abu:Abu_0932 hypothetical protein; PFAM: S-adenosylmethionine-dependent methyltransferase; SPTR: A8ETB8 Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase
YP_003656145.1	COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504:IPR012677; KEGG: nis:NIS_0278 RNA-binding protein RNP-1; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: A6Q1N3 RNA-binding protein RNP-1; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
YP_003656146.1	KEGG: rbo:A1I_01290 hypothetical protein; SPTR: Q1RH85 Putative uncharacterized protein
YP_003656147.1	InterPro IPR011051; KEGG: pin:Ping_2923 hypothetical protein; SPTR: A6FGP6 Putative uncharacterized protein
YP_003656148.1	COGs: COG1284 conserved hypothetical protein; InterPro IPR003740:IPR019264; KEGG: abu:Abu_1411 hypothetical protein; PFAM: protein of unknown function DUF161; Protein of unknown function DUF2179; SPTR: C1ZYN8 Uncharacterized conserved protein; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179)
YP_003656149.1	COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: aha:AHA_2140 proton/glutamate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: A0KK63 Proton/glutamate symporter; PFAM: Sodium:dicarboxylate symporter family
YP_003656150.1	InterPro IPR000620; KEGG: lpf:lpl2401 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C9PGX7 Permease; PFAM: EamA-like transporter family
YP_003656151.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006139:IPR006140; KEGG: pmj:P9211_12891 lactate dehydrogenase and related dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: A9BBK8 Lactate dehydrogenase and related dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_003656152.1	InterPro IPR011051; KEGG: bpe:BP2299 hypothetical protein; SPTR: C5T0B1 Putative uncharacterized protein; PFAM: Cupin domain
YP_003656153.1	COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004841:IPR002293:IPR001901; KEGG: paa:Paes_1315 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: B4S8F3 Amino acid permease-associated region; PFAM: Amino acid permease
YP_003656154.1	KEGG: mcp:MCAP_0798 ABC transporter, permease protein, putative; SPTR: C7LLI3 ABC transporter, permease protein
YP_003656155.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR000815:IPR016156:IPR004099; KEGG: lbl:LBL_1389 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Q051W6 Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_003656156.1	COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: cps:CPS_1844 hypothetical protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: Q484E1 Putative uncharacterized protein; PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427
YP_003656157.1	COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: bth:BT_1428 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q8A7U6 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase
YP_003656158.1	COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterProIPR018060:IPR009057:IPR003313:IPR000005:IPR 012287; KEGG: cbe:Cbei_3413 AraC protein, arabinose-binding/dimerisation; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A6LYV9 AraC protein, arabinose-binding/dimerisation; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_003656159.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: cbe:Cbei_3414 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A6LYW0 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator
YP_003656160.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: dol:Dole_0446 Cro-like protein; PFAM: transglutaminase domain protein; SPTR: Q2BNL1 Lipoprotein, putative; PFAM: Transglutaminase-like superfamily
YP_003656161.1	InterPro IPR007341; KEGG: cpb:Cphamn1_0910 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: B3EPH7 Transglycosylase-associated protein; PFAM: Transglycosylase associated protein
YP_003656162.1	COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR006662:IPR012336:IPR013766:IPR017937:IPR 012335:IPR005746:IPR017936; KEGG: abu:Abu_1880 thioredoxin; PFAM: Thioredoxin domain; SPTR: A8EVZ0 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_003656163.1	COGs: COG0450 Peroxiredoxin; InterProIPR012336:IPR000866:IPR019479:IPR012335:IPR 017936; KEGG: abu:Abu_1879 alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; SPTR: A8ERJ0 Alkyl hydroperoxide reductase/ Thiol specific antioxidant; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family
YP_003656164.1	InterPro IPR001646; KEGG: dps:DP2447 McbG protein; PFAM: pentapeptide repeat protein; SPTR: Q6AKE9 Related to McbG protein; PFAM: Pentapeptide repeats (8 copies)
YP_003656165.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR009010:IPR006655:IPR006061:IPR006311:IPR 017909; KEGG: wsu:WS0938 TtrA; SPTR: Q7MRY4 TTRA; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain
YP_003656166.1	COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: wsu:WS0937 hypothetical protein; PFAM: Polysulphide reductase NrfD; SPTR: Q7MRY5 Putative uncharacterized protein nuoM; PFAM: Polysulphide reductase, NrfD
YP_003656167.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterProIPR001450:IPR017900:IPR006311:IPR017909:IPR 017896; KEGG: wsu:WS0936 hypothetical protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A1HNC7 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_003656168.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR005467; KEGG: wsu:WS0935 putative two-component sensor; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q7M9G7 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003656169.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR011006:IPR016032:IPR001867:IPR 011991; KEGG: cco:CCC13826_1869 NAD(P)H-flavin oxidoreductase; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C6RJ62 Response regulator receiver domain protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656170.1	COGs: COG1278 Cold shock protein; InterProIPR002059:IPR011129:IPR016027:IPR012156:IPR 019844:IPR012340; KEGG: tdn:Suden_1504 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B6BNR1 'Cold-shock' DNA-binding domain, putative; PFAM: 'Cold-shock' DNA-binding domain
YP_003656171.1	COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR002052; KEGG: mxa:MXAN_4925 methyltransferase; SPTR: Q1VRC2 Putative uncharacterized protein; PFAM: Methyltransferase small domain
YP_003656172.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR016040:IPR002198; KEGG: Pc21g08110; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: B6HLK5 Pc21g08110 protein; PFAM: short chain dehydrogenase
YP_003656173.1	KEGG: dps:DP0703 hypothetical protein; SPTR: Q6AQE1 Putative uncharacterized protein
YP_003656174.1	KEGG: lch:Lcho_2520 hypothetical protein; SPTR: A0YEF7 Putative uncharacterized protein
YP_003656175.1	COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: rfr:Rfer_2293 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C6P5Y9 Metal dependent phosphohydrolase; PFAM: HD domain
YP_003656176.1	COGs: COG4087 Soluble P-type ATPase; KEGG: chy:CHY_2668 hypothetical protein; SPTR: A3YFU2 Putative uncharacterized protein
YP_003656177.1	InterPro IPR000620; KEGG: sun:SUN_1921 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A6QBK9 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_003656178.1	InterPro IPR011009:IPR002573; KEGG: sun:SUN_0535 hypothetical protein; PFAM: Choline/ethanolamine kinase; SPTR: C2A304 Phosphotransferase family protein; PFAM: Choline/ethanolamine kinase
YP_003656179.1	COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: pha:PSHAa2431 transporter protein; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: C2A305 Nicotinamide mononucleotide transporter PnuC; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC
YP_003656180.1	KEGG: dar:Daro_4085 ABC-type phosphate/phosphonate transport system periplasmic component-like protein; SPTR: Q478C0 ABC-type phosphate/phosphonate transport system periplasmic component-like protein
YP_003656181.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003660:IPR003594:IPR009082:IPR 005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SPTR: A8EVB1 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003656182.1	COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524:IPR015424:IPR011991:IPR015421; KEGG: sun:SUN_0922 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: A6Q8S1 Transcriptional regulator, GntR family; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_003656183.1	InterPro IPR001763; KEGG: cyc:PCC7424_1705 rhodanese domain protein; SPTR: C2RIT8 Putative uncharacterized protein
YP_003656184.1	KEGG: vex:VEA_001240 hypothetical protein; SPTR: A3WN52 YrhK
YP_003656185.1	COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR020103:IPR006145:IPR018496:IPR000748; KEGG: sun:SUN_0745 ribosomal small subunit pseudouridine synthase A; PFAM: pseudouridine synthase; SPTR: A6Q895 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase family
YP_003656186.1	KEGG: cps:CPS_2457 hypothetical protein; SPTR: Q1ZC20 Putative uncharacterized protein
YP_003656187.1	KEGG: sbp:Sbal223_3071 hypothetical protein; SPTR: Q2BGI9 Probable transmembrane protein
YP_003656188.1	COGs: COG0730 permease; InterPro IPR002781; KEGG: vex:VEA_001494 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Q1V998 Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE
YP_003656189.1	KEGG: sun:SUN_0434 hypothetical protein; SPTR: B6BKS8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1566)
YP_003656190.1	COGs: COG5309 Exo-beta-1 3-glucanase; InterPro IPR017853:IPR001173:IPR000490; KEGG: abu:Abu_1451 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: A8EUT2 Glycosyltransferase; PFAM: Glycosyl transferase family 2; Glycosyl hydrolases family 17
YP_003656191.1	InterPro IPR000620; KEGG: dat:HRM2_46400 putative integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C0QGB7 Putative integral membrane protein; PFAM: EamA-like transporter family
YP_003656192.1	KEGG: abu:Abu_0914 hypothetical protein; SPTR: A8ETA0 Putative uncharacterized protein
YP_003656193.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: vcj:VCD_000144 phage shock protein E; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C5V258 Rhodanese domain protein; PFAM: Rhodanese-like domain
YP_003656194.1	COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR016181:IPR000182; KEGG: cbe:Cbei_1565 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: A6LTQ9 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_003656195.1	InterPro IPR003718; KEGG: pjd:Pjdr2_4935 OsmC family protein; PFAM: OsmC family protein; SPTR: C6D0E7 OsmC family protein; PFAM: OsmC-like protein
YP_003656196.1	COGs: COG3782 conserved hypothetical protein; InterPro IPR015003; KEGG: gfo:GFO_1751 hypothetical protein; PFAM: Domain of unknown function DUF1853; SPTR: A0M276 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1853)
YP_003656198.1	KEGG: cac:CAC3393 hypothetical protein; SPTR: C9KLQ7 Putative uncharacterized protein
YP_003656199.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: aoe:Clos_1202 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C7IBJ3 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656200.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003660:IPR003661:IPR003594:IPR 009082:IPR005467; KEGG: sak:SAK_0175 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C7IBJ2 Histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003656201.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003656202.1	COGs: COG3884 Acyl-ACP thioesterase; InterPro IPR002864; KEGG: mta:Moth_2204 acyl-ACP thioesterase; PFAM: acyl-ACP thioesterase; SPTR: Q2RGE6 Acyl-ACP thioesterase; PFAM: Acyl-ACP thioesterase
YP_003656203.1	KEGG: mmw:Mmwyl1_2936 hypothetical protein; SPTR: A6VZG8 Putative uncharacterized protein
YP_003656204.1	KEGG: gdi:GDI_2752 hypothetical protein; SPTR: A9HQ89 Putative uncharacterized protein
YP_003656205.1	KEGG: shn:Shewana3_2240 hypothetical protein; SPTR: A0KXF0 Putative uncharacterized protein
YP_003656206.1	KEGG: bhy:BHWA1_02546 hypothetical protein; SPTR: C5F172 Putative uncharacterized protein
YP_003656207.1	InterPro IPR016181:IPR000182; KEGG: cyc:PCC7424_5258 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B4B725 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_003656208.1	KEGG: mmo:MMOB0380 unspecified sugar ABC transport permease protein; SPTR: Q6KIQ2 Unspecified sugar ABC transport permease protein
YP_003656209.1	KEGG: fjo:Fjoh_3694 hypothetical protein; SPTR: A5FDL3 Putative uncharacterized protein
YP_003656210.1	InterPro IPR013026; KEGG: bhy:BHWA1_01820 TPR domain-containing protein; SPTR: C0R2E5 TPR domain-containing protein
YP_003656211.1	COGs: COG2128 conserved hypothetical protein; KEGG: bcb:BCB4264_A1415 hypothetical protein; SPTR: C2SHA7 Putative uncharacterized protein
YP_003656212.1	KEGG: hypothetical protein; SPTR: A8IXD3 Predicted protein
YP_003656213.1	InterPro IPR019504; KEGG: fjo:Fjoh_3032 phage exclusion protein Lit; PFAM: Peptidase U49, Lit peptidase; SPTR: A6GL96 Putative uncharacterized protein; PFAM: Peptidase U49
YP_003656214.1	KEGG: gdi:GDI_2752 hypothetical protein; SPTR: A9HQ89 Putative uncharacterized protein
YP_003656215.1	InterPro IPR016181:IPR000182; KEGG: cyc:PCC7424_5258 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B4B725 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_003656216.1	KEGG: hypothetical protein; SPTR: A7BAB2 Putative uncharacterized protein
YP_003656217.1	KEGG: hch:HCH_00928 hypothetical protein; SPTR: Q2SNF6 Putative uncharacterized protein
YP_003656218.1	InterPro IPR012654; KEGG: shn:Shewana3_1247 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A0KUL3 Putative uncharacterized protein; PFAM: Protein of unknown function (Hypoth_ymh); TIGRFAM: conserved hypothetical protein TIGR02391
YP_003656219.1	COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: swd:Swoo_0549 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: A9HPV2 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase
YP_003656220.1	KEGG: hypothetical protein; SPTR: Q5CVY9 Uncharacterized coiled coil protein
YP_003656221.1	COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR011702:IPR001317:IPR006220:IPR000991:IPR 018318:IPR001674:IPR014729:IPR004739:IPR017926; KEGG: abu:Abu_0921 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like; SPTR: A8ETA7 GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_003656222.1	KEGG: abu:Abu_0817 hypothetical protein; SPTR: A8ET08 Putative uncharacterized protein
YP_003656223.1	COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: tdn:Suden_0421 transporter, putative; PFAM: Citrate transporter; SPTR: Q30TH9 Transporter, putative; PFAM: Citrate transporter
YP_003656224.1	COGs: COG0029 Aspartate oxidase; InterPro IPR015939:IPR003953:IPR005288; KEGG: abu:Abu_0922 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A8ETA8 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: FAD binding domain; TIGRFAM: L-aspartate oxidase
YP_003656225.1	KEGG: abu:Abu_0923 hypothetical protein; SPTR: A8ETA9 Putative uncharacterized protein
YP_003656226.1	COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: abu:Abu_0924 hypothetical protein; PFAM: protein of unknown function DUF45; SPTR: A8ETB0 Putative uncharacterized protein; PFAM: Protein of unknown function DUF45
YP_003656227.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176:IPR015424:IPR004839:IPR015421; KEGG: abu:Abu_0925 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A8ETB1 Aspartate aminotransferase, aminotransferase, classes I and II; PFAM: Aminotransferase class I and II
YP_003656228.1	COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: abu:Abu_0926 cation efflux protein; PFAM: cation efflux protein; SPTR: A8ETB2 Cation efflux protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003656229.1	COGs: COG4252 transmembrane sensor domain; InterPro IPR001054:IPR007890; KEGG: abu:Abu_0928 adenylate/guanylate cyclase; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: A8ETB4 Adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain
YP_003656230.1	KEGG: hypothetical protein ; K10658 E3 ubiquitin-protein ligase MARCH3; SPTR: C3ZXL6 Putative uncharacterized protein (Fragment)
YP_003656231.1	COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: abu:Abu_0614 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: A8ESF5 Putative uncharacterized protein; PFAM: CBS domain
YP_003656232.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439:IPR017871; KEGG: abu:Abu_0909 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ET95 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003656233.1	COGs: COG1610 conserved hypothetical protein; InterPro IPR003789:IPR019004; KEGG: abu:Abu_0908 GatB/YqeY family protein; PFAM: Protein of unknown function; SPTR: A8ET94 GatB/YqeY family protein; PFAM: Yqey-like protein
YP_003656234.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_0907 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: A8ET93 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003656235.1	COGs: COG2831 Hemolysin activation/secretion protein; InterPro IPR013686; KEGG: tdn:Suden_1007 hemolysin activation/secretion protein-like; PFAM: Polypeptide-transport-associated domain protein ShlB-type; SPTR: Q30RU6 Hemolysin activation/secretion protein-like protein; PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type
YP_003656236.1	InterPro IPR011050:IPR008638:IPR011493; KEGG: tdn:Suden_1008 GLUG; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; SPTR: Q30RU5 GLUG; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: The GLUG motif; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain
YP_003656237.1	InterProIPR019734:IPR013105:IPR001440:IPR011990:IPR 017481:IPR013026; KEGG: ter:Tery_3075 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Q4C9M1 TPR repeat:TPR repeat; PFAM: Tetratricopeptide repeat; TIGRFAM: conserved hypothetical protein TIGR03032
YP_003656238.1	COGs: COG0529 Adenylylsulfate kinase and related kinase; InterPro IPR002891; KEGG: gwc:GWCH70_0411 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; PRIAM: Adenylyl-sulfate kinase; SPTR: B6BKH4 Adenylyl-sulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK)
YP_003656239.1	KEGG: nam:NAMH_1565 putative lipoprotein; SPTR: B9L6G6 Putative lipoprotein
YP_003656240.1	COGs: COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; InterPro IPR005546:IPR006315; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; SPTR: B9L6G7 Putative outer membrane autotransporter barrel domain protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain
YP_003656241.1	InterPro IPR011050:IPR008638:IPR011493; KEGG: tdn:Suden_1008 GLUG; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; SPTR: Q30RU5 GLUG; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: The GLUG motif; haemagglutination activity domain; TIGRFAM: filamentous haemagglutinin family N-terminal domain
YP_003656242.1	COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR011623:IPR011495; KEGG: abu:Abu_1163 two-component sensor histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; SPTR: A8ETZ9 Two-component sensor histidine kinase; PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003656243.1	KEGG: abu:Abu_1163 two-component sensor histidine kinase; SPTR: A8ETZ9 Two-component sensor histidine kinase; PFAM: 7TMR-DISM extracellular 2
YP_003656244.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: nis:NIS_0512 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A6Q2B7 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656245.1	InterPro IPR014127; KEGG: abu:Abu_0900 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A8ET86 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2400); TIGRFAM: conserved hypothetical protein TIGR02757
YP_003656246.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002347:IPR002198:IPR016040; KEGG: abu:Abu_0899 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8ET85 Oxidoreductase, short-chain dehydrogenase/reductase family; PFAM: short chain dehydrogenase
YP_003656247.1	COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: ctc:CTC00567 Na+/H+ antiporter; PFAM: Na+/H+ antiporter NhaC-like; SPTR: B9D5E6 Na+/H+ antiporter family; PFAM: Na+/H+ antiporter family
YP_003656248.1	COGs: COG1971 membrane protein; InterPro IPR003810; KEGG: abu:Abu_0335 hypothetical protein; PFAM: protein of unknown function DUF204; SPTR: B6BHJ1 Membrane protein; PFAM: Domain of unknown function DUF
YP_003656249.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: abu:Abu_0894 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8ET80 ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003656250.1	COGs: COG0742 N6-adenine-specific methylase; InterPro IPR016065:IPR004398:IPR002052; KEGG: abu:Abu_0893 putative methyltransferase; PFAM: Protein of unknown function methylase putative; SPTR: A8ET79 Putative methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_003656251.1	KEGG: hypothetical protein; SPTR: Q8IIG7 Uncharacterized protein PF11_0207
YP_003656252.1	COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR020471:IPR001395; KEGG: mca:MCA0485 aldo/keto reductase family oxidoreductase; PFAM: aldo/keto reductase; SPTR: Q60BI7 Oxidoreductase, aldo/keto reductase family; PFAM: Aldo/keto reductase family
YP_003656253.1	COGs: COG1418 HD superfamily hydrolase; InterProIPR004087:IPR003607:IPR018111:IPR006674:IPR 017705:IPR006675:IPR004088; KEGG: abu:Abu_0892 phosphodiesterase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; PRIAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: A8ET78 2',3'-cyclic-nucleotide 2'-phosphodiesterase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG
YP_003656254.1	COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: abu:Abu_0891 putative 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: A8ET77 Putative 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_003656255.1	InterProIPR012336:IPR013740:IPR017937:IPR012335:IPR 017936; KEGG: abu:Abu_0890 putative lipoprotein thiredoxin; PFAM: Redoxin domain protein; SPTR: A8ET76 Putative lipoprotein thiredoxin; PFAM: Redoxin
YP_003656256.1	COGs: COG0552 Signal recognition particle GTPase; InterPro IPR003593:IPR000897:IPR004390; KEGG: abu:Abu_0889 signal recognition particle-docking GTPase FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; SPTR: A8ET75 Signal recognition particle-docking GTPase FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_003656257.1	KEGG: wsu:WS0010 hypothetical protein; SPTR: Q7MSX8 Putative uncharacterized protein
YP_003656258.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_0904 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ET90 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656259.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003661:IPR003594:IPR009082:IPR 005467; KEGG: abu:Abu_0905 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ET91 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003656260.1	COGs: COG3258 Cytochrome c; InterPro IPR009056:IPR003088; KEGG: tcx:Tcr_2105 cytochrome c, class I; PFAM: cytochrome c class I; SPTR: Q31DS9 Cytochrome c, class I; PFAM: Cytochrome c
YP_003656261.1	InterPro IPR005149:IPR011991; KEGG: bsu:BSU11079 putative DNA/RNA binding protein; PFAM: transcriptional regulator PadR family protein; SPTR: C0H3Y4 Putative DNA-binding protein yizB; PFAM: Transcriptional regulator PadR-like family
YP_003656262.1	KEGG: CCAAT-box DNA binding protein subunit B; SPTR: A8RCJ4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1700)
YP_003656263.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: bxe:Bxe_B2075 amino acid efflux pump, RhtB family protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q13PS7 Amino acid efflux pump, RhtB family, LysE superfamily; PFAM: LysE type translocator
YP_003656264.1	InterPro IPR012337:IPR002156; KEGG: abu:Abu_1463 ribonuclease H-like protein; PFAM: ribonuclease H; SPTR: A8EUU4 Ribonuclease H-like protein; PFAM: RNase H
YP_003656265.1	COGs: COG3150 esterase; InterPro IPR008886; KEGG: abu:Abu_0885 hypothetical protein; PFAM: protein of unknown function UPF0227; SPTR: A8ET71 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0227)
YP_003656266.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013163; KEGG: abu:Abu_0324 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ERM5 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003656267.1	COGs: COG2017 Galactose mutarotase; InterPro IPR011013:IPR008183:IPR014718; KEGG: abu:Abu_1477 aldose 1-epimerase family protein, LacX; PFAM: Aldose 1-epimerase; SPTR: A8EUV8 Aldose 1-epimerase family protein, LacX; PFAM: Aldose 1-epimerase
YP_003656268.1	COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR016193:IPR002125; KEGG: wsu:WS1357 cytosine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; PRIAM: Cytosine deaminase; SPTR: B6BMF3 Cytosine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003656269.1	KEGG: rba:RB12630 signal peptide; SPTR: A6CAJ1 Putative uncharacterized protein
YP_003656270.1	InterPro IPR008985:IPR013320; KEGG: sde:Sde_3272 hypothetical protein; SPTR: P84143 Alginate lyase; PFAM: Alginate lyase
YP_003656271.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: hch:HCH_06500 putative threonine efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q1JZ10 Putative threonine efflux protein; PFAM: LysE type translocator
YP_003656272.1	InterPro IPR018637; KEGG: shl:Shal_2854 hypothetical protein; PFAM: Protein of unknown function DUF2059; SPTR: B0TMP5 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2059)
YP_003656273.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: ttu:TERTU_3762 translocator protein, LysE family; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A6EVE4 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator
YP_003656274.1	KEGG: cph:Cpha266_1616 hypothetical protein; SPTR: A1BGW0 Putative uncharacterized protein
YP_003656275.1	COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593:IPR020568; KEGG: abu:Abu_0884 DNA repair protein RadA; SMART: AAA ATPase; SPTR: A8ET70 DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA
YP_003656276.1	COGs: COG5496 thioesterase; KEGG: abu:Abu_0882 hypothetical protein; SPTR: A8ET68 Putative uncharacterized protein
YP_003656277.1	COGs: COG0319 metal-dependent hydrolase; InterPro IPR002036:IPR020549; KEGG: abu:Abu_0881 putative metalloprotease; PFAM: protein of unknown function UPF0054; SPTR: A8ET67 Putative metalloprotease Abu_0881; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043
YP_003656278.1	COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481:IPR004837; KEGG: nis:NIS_0785 calcium/cation antiporter; PFAM: sodium/calcium exchanger membrane region; SPTR: A6Q338 Calcium:H+/Na+ antiporter, CaCA family; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger (cax); K+-dependent Na+/Ca+ exchanger related-protein
YP_003656279.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: abu:Abu_0880 peroxide stress regulator; PFAM: ferric-uptake regulator; SPTR: A8ET66 Peroxide stress regulator; PFAM: Ferric uptake regulator family
YP_003656280.1	COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR009078:IPR002177:IPR008331:IPR012347; KEGG: wsu:WS1589 neutrophil-activating protein (neutrophil activating protein NapA)(fragment); PFAM: Ferritin Dps family protein; SPTR: C2A0Z2 DNA-binding ferritin-like protein (Oxidative damage protectant); PFAM: Ferritin-like domain
YP_003656281.1	COGs: COG1592 Rubrerythrin; InterProIPR004462:IPR009078:IPR003251:IPR009040:IPR 012347:IPR004039; KEGG: sun:SUN_1880 rubrerythrin; PFAM: Rubrerythrin; Desulfoferrodoxin Dfx domain protein; SPTR: A6QBG8 Rubrerythrin; PFAM: Rubrerythrin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain
YP_003656282.1	InterPro IPR005135; KEGG: abu:Abu_0879 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: A8ET65 Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_003656283.1	COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: abu:Abu_0878 virulence factor MviN protein; PFAM: virulence factor MVIN family protein; SPTR: A8ET64 Virulence factor MviN protein; TIGRFAM: integral membrane protein MviN; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_003656284.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003593:IPR011527:IPR001140:IPR003439:IPR 017940:IPR017871; KEGG: abu:Abu_0877 multidrug resistance protein MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A8ET63 Multidrug resistance protein MsbA; PFAM: ABC transporter; ABC transporter transmembrane region
YP_003656285.1	COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR005719:IPR012135:IPR013785:IPR001295; KEGG: abu:Abu_0876 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; PRIAM: Dihydroorotate oxidase; SPTR: A8ET62 Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2
YP_003656286.1	COGs: COG0612 Zn-dependent peptidase; InterProIPR011249:IPR011765:IPR007863:IPR011237:IPR 001431; KEGG: abu:Abu_0875 putative zinc protease; PFAM: peptidase M16 domain protein; SPTR: A8ET61 Putative zinc protease; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_003656287.1	COGs: COG2346 Truncated hemoglobins; InterPro IPR009050:IPR001486:IPR012292; KEGG: tdn:Suden_0993 globin; PFAM: globin; SPTR: Q30RW0 Truncated hemoglobin; PFAM: Bacterial-like globin
YP_003656288.1	COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterProIPR005263:IPR002220:IPR013785:IPR020624:IPR 020625; KEGG: abu:Abu_0874 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: A8ET60 Dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_003656289.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002347:IPR002198; KEGG: abu:Abu_0873 7-alpha-hydroxysteroid dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: A8ET59 Oxidoreductase, short chain dehydrogenase/reductase family; PFAM: short chain dehydrogenase
YP_003656290.1	COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570:IPR000462; KEGG: abu:Abu_0872 CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: A8ET58 CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_003656291.1	COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478:IPR004387:IPR008915; KEGG: abu:Abu_0871 membrane-associated zinc metalloprotease, putative; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8ET57 Membrane-associated zinc metalloprotease, putative; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP
YP_003656292.1	COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: abu:Abu_0870 hypothetical protein; PFAM: alanine racemase domain protein; SPTR: A8ET56 Putative uncharacterized protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_003656293.1	KEGG: pph:Ppha_1332 hypothetical protein; SPTR: B4SHD0 Putative uncharacterized protein
YP_003656294.1	KEGG: abu:Abu_1148 hypothetical protein; SPTR: A8ETY4 Putative uncharacterized protein
YP_003656295.1	KEGG: gfo:GFO_3308 ZIP family metal transporter; SPTR: A0M6K6 ZIP family metal transporter; PFAM: ZIP Zinc transporter
YP_003656296.1	COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR011060:IPR013798:IPR013785:IPR001468; KEGG: nis:NIS_0989 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: C2A353 Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_003656297.1	InterPro IPR019734:IPR013026:IPR011990; KEGG: abu:Abu_0851 hypothetical protein; SPTR: A8ET37 Putative uncharacterized protein
YP_003656298.1	InterPro IPR005358; KEGG: abu:Abu_0852 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: A8ET38 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153)
YP_003656299.1	COGs: COG4123 O-methyltransferase; InterPro IPR007848:IPR002052; KEGG: abu:Abu_0853 hypothetical protein; PFAM: methyltransferase small; SPTR: A8ET39 Putative uncharacterized protein; PFAM: Methyltransferase small domain
YP_003656300.1	InterPro IPR001450:IPR017896:IPR017900; KEGG: abu:Abu_0854 2-oxoglutarate-acceptor oxidoreductase subunit OorD; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ET40 OorD subunit of 2-oxoglutarate:acceptor oxidoreductase
YP_003656301.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR009014:IPR002880:IPR015941; KEGG: abu:Abu_0855 2-oxoglutarate-acceptor oxidoreductase subunit OorA; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: A8ET41 OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; PFAM: domain; Transketolase, C-terminal domain
YP_003656302.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: cco:CCC13826_1293 2-oxoglutarate-acceptor oxidoreductase subunit OorB; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: C2A2C6 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003656303.1	COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR002869:IPR019752; KEGG: abu:Abu_0857 2-oxoglutarate-acceptor oxidoreductase subunit OorC; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: A8ET43 OorC subunit of 2-oxoglutarate:acceptor oxidoreductase; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase
YP_003656304.1	COGs: COG4461 Uncharacterized protein putative lipoprotein; InterPro IPR009739; KEGG: rbo:A1I_04335 hypothetical protein; PFAM: protein of unknown function DUF1311; SPTR: Q1RIU1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1311)
YP_003656305.1	KEGG: hypothetical protein; SPTR: A0DWJ2 Chromosome undetermined scaffold_67, whole genome shotgun sequence
YP_003656306.1	KEGG: conserved hypothetical protein; SPTR: Q8I2P4 Putative uncharacterized protein
YP_003656307.1	KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein
YP_003656309.1	KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein
YP_003656311.1	KEGG: wbr:WGLp017 hypothetical protein; SPTR: Q8D3I4 Imp protein
YP_003656314.1	KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein
YP_003656315.1	KEGG: wbr:WGLp156 hypothetical protein; SPTR: B4YAY4 Ribosomal protein S3 (Fragment)
YP_003656316.1	COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR006674; KEGG: syp:SYNPCC7002_A0721 HD domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: A1ZHK7 Guanosine polyphosphate pyrophosphohydrolase/synthetase
YP_003656317.1	COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055:IPR006054:IPR012337:IPR013520; KEGG: abu:Abu_0858 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: A8ET44 DNA polymerase III; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family
YP_003656318.1	COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR011060:IPR001240:IPR013785; KEGG: abu:Abu_0859 N-(5'phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: A8ET45 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YP_003656319.1	COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056:IPR011060:IPR013785; KEGG: abu:Abu_0860 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: A8ET46 Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_003656320.1	COGs: COG2829 Outer membrane phospholipase A; InterPro IPR003187; KEGG: abu:Abu_0861 outer membrane phospholipase A; PFAM: phospholipase A1; PRIAM: Phospholipase A(2); SPTR: A8ET47 Outer membrane phospholipase A; PFAM: Phospholipase A1
YP_003656321.1	KEGG: bth:BT_1694 AcrB/AcrD/AcrF family transporter; SPTR: Q1VZP0 Sensor protein
YP_003656322.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR009082:IPR003661:IPR005467; KEGG: sun:SUN_2242 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A6QCH3 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003656323.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR016032; KEGG: sun:SUN_0781 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B6BHV9 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain
YP_003656324.1	KEGG: chromosome assembly protein ; K06675 structural maintenance of chromosome 4; SPTR: D0DFA7 Acyltransferase
YP_003656325.1	KEGG: conserved hypothetical protein; SPTR: Q7RNC3 Putative uncharacterized protein PY01897 (Fragment)
YP_003656326.1	KEGG: ajs:Ajs_0198 type III restriction system endonuclease, putative; SPTR: A1W2H8 Type III restriction system endonuclease, putative
YP_003656327.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: abu:Abu_1441 GGDEF/PAS domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: B6BML0 GGDEF domain/pas/pac sensor domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003656328.1	KEGG: abu:Abu_1112 hypothetical protein; SPTR: A8ETU8 Putative uncharacterized protein
YP_003656329.1	InterPro IPR004385:IPR015797:IPR000086; KEGG: abu:Abu_0863 hypothetical protein; PFAM: NUDIX hydrolase; PRIAM: UDP-sugar diphosphatase; SPTR: A8ET49 Putative uncharacterized protein; PFAM: NUDIX domain; TIGRFAM: nudix hydrolase, YffH family
YP_003656330.1	KEGG: abu:Abu_1296 hypothetical protein; SPTR: A8EUC9 Putative uncharacterized protein
YP_003656331.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR009082:IPR004358:IPR 005467; KEGG: abu:Abu_0061 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EQX2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003656332.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: sun:SUN_0788 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A6Q8D7 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656333.1	COGs: COG1666 conserved hypothetical protein; InterPro IPR007551; KEGG: abu:Abu_0864 hypothetical protein; PFAM: protein of unknown function DUF520; SPTR: A8ET50 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF520)
YP_003656334.1	COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: abu:Abu_0866 hypothetical protein; PFAM: protein of unknown function DUF423; SPTR: A8ET52 Conserved hypothetical membrane protein (DUF423); PFAM: Protein of unknown function (DUF423)
YP_003656335.1	KEGG: bcm:Bcenmc03_4031 hypothetical protein; SPTR: B6BHY1 Putative uncharacterized protein
YP_003656336.1	COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: abu:Abu_0867 putative nucleotide phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: A8ET53 Putative nucleotide phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain
YP_003656337.1	COGs: COG2252 Permease; InterPro IPR006043; KEGG: tcx:Tcr_0399 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Q31IM8 Nucleobase:cation symporter-2 (NCS2) family transporter; PFAM: Permease family
YP_003656338.1	COGs: COG1578 conserved hypothetical protein; InterPro IPR002791:IPR014444; KEGG: tdn:Suden_1861 hypothetical protein; PFAM: protein of unknown function DUF89; SPTR: B6BI22 Putative uncharacterized protein; PFAM: Protein of unknown function DUF89
YP_003656339.1	KEGG: abu:Abu_1459 hypothetical protein; SPTR: A8EUU0 Putative uncharacterized protein
YP_003656340.1	COGs: COG2360 Leu/Phe-tRNA-protein transferase; InterPro IPR004616; KEGG: abu:Abu_1095 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; PRIAM: Leucyltransferase; SPTR: A8ETT1 Leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_003656341.1	COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterProIPR000524:IPR015424:IPR004839:IPR011991:IPR 015421; KEGG: sun:SUN_0922 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; SPTR: A6Q8S1 Transcriptional regulator, GntR family; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_003656342.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006657; KEGG: tdn:Suden_1255 molybdopterin oxidoreductase; PFAM: molydopterin dinucleotide-binding region; SPTR: Q30R48 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase
YP_003656343.1	COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818; KEGG: amr:AM1_1046 DJ-1/PfpI family protein; PFAM: ThiJ/PfpI domain protein; SPTR: B0C1S0 DJ-1/PfpI family protein; PFAM: DJ-1/PfpI family
YP_003656344.1	COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR009002:IPR012349; KEGG: sun:SUN_0949 hypothetical protein; SPTR: A6Q8U8 Putative uncharacterized protein; PFAM: Pyridoxamine 5'-phosphate oxidase
YP_003656345.1	InterPro IPR013217; KEGG: sun:SUN_0643 tellurite resistance protein TehB; PFAM: Methyltransferase type 12; SPTR: B6BJV2 Tellurite resistance protein TehB; PFAM: Tellurite resistance protein TehB
YP_003656346.1	COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: wsu:WS1166 NADP(H) oxidoreductase; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: Q7M966 NADP(H) OXIDOREDUCTASE; PFAM: Flavodoxin-like fold
YP_003656347.1	COGs: COG1010 Precorrin-3B methylase; InterPro IPR000878:IPR014777; KEGG: ppd:Ppro_0871 cobyric acid synthase CobQ; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Precorrin-3B C(17)-methyltransferase; SPTR: C6MS21 Cobyric acid synthase CobQ; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase
YP_003656348.1	COGs: COG2073 Cobalamin biosynthesis protein CbiG; InterPro IPR002750; KEGG: gbm:Gbem_3540 cobalamin (vitamin B12) biosynthesis CbiG protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; SPTR: C3WNH0 Cobalamin biosynthesis protein CbiG; PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal
YP_003656349.1	COGs: COG2875 Precorrin-4 methylase; InterPro IPR000878:IPR014777:IPR014776:IPR003043; KEGG: tme:Tmel_0702 precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Precorrin-4 C(11)-methyltransferase; SPTR: A6LKW5 Precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase
YP_003656350.1	COGs: COG2242 Precorrin-6B methylase 2; InterPro IPR000878; KEGG: dal:Dalk_0449 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; SPTR: B8FH68 Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit; PFAM: Conserved hypothetical protein 95; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit
YP_003656351.1	COGs: COG1903 Cobalamin biosynthesis protein CbiD; InterPro IPR002748; KEGG: mmp:MMP1203 cobalt-precorrin-6A synthase; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; SPTR: P61988 Putative cobalt-precorrin-6A synthase [deacetylating]; PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD
YP_003656352.1	InterPro IPR012335; KEGG: vsp:VS_2665 cobalamin biosynthesis protein; SPTR: A3XXS7 Cobalamin biosynthesis protein
YP_003656353.1	COGs: COG2082 Precorrin isomerase; InterPro IPR003722; KEGG: taf:THA_1067 cobalt-precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH; SPTR: A5TUT1 Precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase
YP_003656354.1	COGs: COG2243 Precorrin-2 methylase; InterPro IPR000878:IPR014777; KEGG: cac:CAC1379 cobalt-precorrin-2 C(20)-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: B1B8I3 Precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases
YP_003656355.1	COGs: COG4822 Cobalamin biosynthesis protein CbiK Co2+ chelatase; InterPro IPR010388; KEGG: vsp:VS_2666 putative cobalt chelatase; PFAM: anaerobic cobalt chelatase; SPTR: A3XXS8 Anaerobic cobalt chelatase cbiK; PFAM: Cobalt chelatase (CbiK)
YP_003656356.1	KEGG: mmw:Mmwyl1_1388 hypothetical protein; SPTR: A6VV38 Putative uncharacterized protein
YP_003656357.1	KEGG: dfe:Dfer_0547 hypothetical protein; SPTR: C6W078 Putative uncharacterized protein
YP_003656358.1	COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: bac:BamMC406_1112 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: A6D2K7 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase
YP_003656359.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterProIPR003593:IPR008995:IPR003439:IPR013611:IPR 017871; KEGG: bpy:Bphyt_2651 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; SPTR: B1G958 ABC transporter related; PFAM: ABC transporter; TOBE domain
YP_003656360.1	COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: rpc:RPC_1271 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A6D2K5 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003656361.1	COGs: COG0555 ABC-type sulfate transport system permease component; InterPro IPR000515; KEGG: bra:BRADO5361 putative permease protein; putative membrane protein; putative exported protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A4YYR4 Putative permease protein; putative membrane protein; putative exported protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003656362.1	COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: bav:BAV3354 ABC transporter, substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Q2KTP6 ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein
YP_003656363.1	COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR010982:IPR001761:IPR001387; KEGG: bpr:GBP346_A1440 transcriptional repressor, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C4KUX3 Transcriptional repressor, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003656364.1	COGs: COG2199 FOG: GGDEF domain; InterProIPR001638:IPR001610:IPR000160:IPR000014:IPR 015168:IPR013655:IPR000700; KEGG: wsu:WS0850 sensory transduction histidine kinase; PFAM: GGDEF domain containing protein; NMT1/THI5 like domain protein; extracellular solute-binding protein family 3; PAS fold-3 domain protein; SMART: GGDEF domain containing protein; extracellular solute-binding protein family 3; PAC repeat-containing protein; SPTR: Q2BQ31 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; NMT1/THI5 like; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_003656365.1	COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterProIPR018060:IPR014048:IPR009057:IPR000005:IPR 012287:IPR011991:IPR001497; KEGG: abu:Abu_1461 O6-methylguanine-DNA methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EUU2 O6-methylguanine-DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_003656366.1	InterPro IPR012336:IPR000866:IPR017936:IPR012335; KEGG: tdn:Suden_0501 putative thioredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Q30TA0 Thioredoxin; PFAM: AhpC/TSA family
YP_003656367.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR009057:IPR020449:IPR000005:IPR 018062; KEGG: ccv:CCV52592_1805 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C2A120 DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003656368.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR009081:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: B4VZJ3 AMP-binding enzyme domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme
YP_003656369.1	COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR010071:IPR016039:IPR016035:IPR016040:IPR 009081:IPR016036:IPR014030:IPR014031:IPR013968:IPR006163:I PR014043:IPR001242:IPR013624:IPR000873:IPR016038:IPR001227 :IPR020845:IPR018201; KEGG: cce:Ccel_0979 amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase ; KR domain protein; phosphopantetheine-binding; Acyl transferase; condensation domain protein; Non-ribosomal peptide synthetase; SPTR: A3INX3 Non-ribosomal peptide synthase/polyketide synthase; TIGRFAM: amino acid adenylation domain protein; PFAM: Acyl transferase domain; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; TIGRFAM: amino acid adenylation domain
YP_003656370.1	COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR016039:IPR016035:IPR016040:IPR009081:IPR 014030:IPR014031:IPR014043:IPR013968:IPR006163:IPR016038:I PR001227; KEGG: npu:Npun_R3024 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase ; Acyl transferase; KR domain protein; phosphopantetheine-binding; SPTR: Q6E7J4 JamP; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_003656371.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR020459:IPR001242:IPR 013624:IPR000873:IPR006163:IPR020845; KEGG: npu:Npun_CR074 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Non-ribosomal peptide synthetase; phosphopantetheine-binding; SPTR: Q8GAQ3 BarG; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain
YP_003656372.1	COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR010071:IPR016039:IPR016035:IPR016040:IPR 009081:IPR016036:IPR014030:IPR014031:IPR014043:IPR013217:I PR013968:IPR006163:IPR001242:IPR013624:IPR000873:IPR001031 :IPR016038:IPR001227:IPR006162:IPR020845:IPR018201; KEGG: pmr:PMI2600 non-ribosomal peptide synthase (siderophore synthase); PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase ; Acyl transferase; Methyltransferase type 12; KR domain protein; phosphopantetheine-binding; condensation domain protein; Non-ribosomal peptide synthetase; Thioesterase; SPTR: B4EXX8 Putative non-ribosomal peptide synthase (Putative siderophore synthase); TIGRFAM: amino acid adenylation domain protein; PFAM: Acyl transferase domain; Methyltransferase domain; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; Thioesterase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; TIGRFAM: amino acid adenylation domain
YP_003656373.1	COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: bbe:BBR47_28880 putative type II thioesterase; PFAM: Thioesterase; PRIAM: Oleoyl-[acyl-carrier-protein] hydrolase; SPTR: Q8G988 Microcystin synthetase associated thioesterase; PFAM: Thioesterase domain
YP_003656374.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR010085:IPR011032:IPR016040:IPR013154:IPR 013149; KEGG: nca:Noca_1795 crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Q53865 Crotonyl CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: crotonyl-CoA reductase
YP_003656375.1	COGs: COG2091 Phosphopantetheinyl transferase; InterPro IPR008278; KEGG: ter:Tery_4684 phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Q10VS6 Phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_003656376.1	COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010105:IPR012910:IPR000531; KEGG: abu:Abu_0340 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A8ERP1 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_003656377.1	KEGG: sun:SUN_0941 hypothetical protein; SPTR: A5L4N1 Hyopothetical protein; PFAM: Protein of unknown function (DUF1329)
YP_003656378.1	KEGG: sun:SUN_0942 hypothetical protein; SPTR: A6Q8U1 Putative uncharacterized protein
YP_003656379.1	COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: sun:SUN_0943 RND efflux transporter; SPTR: A6Q8U2 Efflux transporter, RND superfamily; PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family
YP_003656380.1	COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR004514:IPR011035:IPR003789:IPR020060:IPR 020058:IPR020059:IPR018027:IPR020061:IPR020056:IPR001412; KEGG: sun:SUN_1139 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; Asn/Gln amidotransferase; SPTR: A6Q9D5 Glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; GatB domain; TIGRFAM: glutaminyl-tRNA synthetase
YP_003656381.1	KEGG: Os01g0356800; hypothetical protein; SPTR: B6BLG0 Putative uncharacterized protein
YP_003656382.1	KEGG: abu:Abu_0915 hypothetical protein; SPTR: A8ETA1 Putative uncharacterized protein
YP_003656383.1	KEGG: abu:Abu_0527 hypothetical protein; SPTR: A8ES70 Putative uncharacterized protein
YP_003656384.1	COGs: COG0397 conserved hypothetical protein; InterPro IPR003846; KEGG: abu:Abu_0916 hypothetical protein; PFAM: protein of unknown function UPF0061; SPTR: A8ETA2 Putative uncharacterized protein; PFAM: Uncharacterized ACR, YdiU/UPF0061 family
YP_003656385.1	KEGG: hhe:HH1096 hypothetical protein; SPTR: Q7VH71 Putative uncharacterized protein
YP_003656386.1	KEGG: hypothetical protein ; K02324 DNA polymerase epsilon subunit 1; SPTR: C1I483 DNA/RNA helicase
YP_003656387.1	KEGG: vha:VIBHAR_02004 hypothetical protein; SPTR: A7MW77 Putative uncharacterized protein
YP_003656388.1	COGs: COG0731 Fe-S oxidoreductase; InterPro IPR007197; KEGG: abu:Abu_1785 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A8EVQ2 Radical SAM domain protein; PFAM: Radical SAM superfamily
YP_003656389.1	COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR006361:IPR000257; KEGG: abu:Abu_1786 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: A8EVQ3 Uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_003656390.1	COGs: COG2862 membrane protein; InterPro IPR005134; KEGG: abu:Abu_1787 putative integral membrane protein; PFAM: conserved hypothetical protein; SPTR: B6BJD3 Uncharacterized protein family, UPF0114; PFAM: Uncharacterized protein family, UPF0114; TIGRFAM: conserved hypothetical transmembrane protein
YP_003656391.1	COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterProIPR005986:IPR016040:IPR012080:IPR000534:IPR 012280:IPR000319; KEGG: abu:Abu_1788 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: A8EVQ5 Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
YP_003656392.1	COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterProIPR002205:IPR005743:IPR013760:IPR006691:IPR 013758:IPR013757:IPR008162; KEGG: abu:Abu_1789 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: A1BPQ8 DNA gyrase subunit A (Fragment); TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit
YP_003656393.1	KEGG: abu:Abu_1790 hypothetical protein; SPTR: A8EVQ7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF465)
YP_003656394.1	COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813:IPR016117; KEGG: abu:Abu_1791 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: A8EVQ8 Bifunctional ornithine acetyltransferase / N-acetylglutamate synthase; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_003656395.1	COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR013099:IPR003148:IPR006037; KEGG: abu:Abu_1792 potassium channel protein, putative; PFAM: Ion transport 2 domain protein ; TrkA-N domain protein; TrkA-C domain protein; SPTR: A8EVQ9 Potassium channel protein, putative; PFAM: TrkA-N domain; Ion channel; TrkA-C domain
YP_003656396.1	COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: tdn:Suden_1602 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: B6BKX2 Ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_003656397.1	InterPro IPR001296; KEGG: abu:Abu_1794 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: A8EVR1 Putative uncharacterized protein; PFAM: Glycosyl transferases group 1
YP_003656398.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011910:IPR002201; KEGG: abu:Abu_1800 lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: A8EVR7 Lipopolysaccharide heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II
YP_003656399.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nam:NAMH_1714 WabG; PFAM: glycosyl transferase group 1; SPTR: B9L6V6 WabG; PFAM: Glycosyl transferases group 1
YP_003656400.1	InterPro IPR007016; KEGG: ent:Ent638_0111 hypothetical protein; PFAM: O-antigen polymerase; SPTR: A4W521 Putative uncharacterized protein
YP_003656401.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: wsu:WS0253 hypothetical protein; PFAM: glycosyl transferase family 9; SPTR: Q7MSP3 Putative uncharacterized protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_003656402.1	COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR011004:IPR001451; KEGG: mba:Mbar_B3758 hypothetical protein; SPTR: A5ZDF4 Putative uncharacterized protein; PFAM: Bacterial transferase hexapeptide (three repeats)
YP_003656403.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: nam:NAMH_1718 glycosyl transferase, family 9; PFAM: glycosyl transferase family 9; SPTR: B9L6W0 Glycosyl transferase, family 9; PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_003656404.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: nam:NAMH_1719 putative heptosyliii transferase; PFAM: glycosyl transferase family 9; SPTR: B9L6W1 Putative heptosyliii transferase; PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_003656405.1	COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: wsu:WS1905 xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase; SPTR: Q7M836 XYLANASE/CHITIN DEACETYLASE; PFAM: Polysaccharide deacetylase
YP_003656406.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: wsu:WS0250 galactosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q7MAH3 PROBABLE GALACTOSYLTRANSFERASE; PFAM: Glycosyl transferases group 1
YP_003656407.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011916:IPR002201; KEGG: nam:NAMH_1721 putative lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9; SPTR: B9L6W3 Putative lipopolysaccharide heptosyltransferase III; TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase III, putative
YP_003656408.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: nam:NAMH_1722 lipopolysaccharide core biosynthesis glycosyl transferase WaaE; PFAM: glycosyl transferase family 2; SPTR: B9L6W4 Lipopolysaccharide core biosynthesis glycosyl transferase WaaE; PFAM: Glycosyl transferase family 2
YP_003656409.1	COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: cff:CFF8240_1400 lipid A biosynthesis lauroyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: C1ZZK6 Lauroyl/myristoyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_003656410.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011908:IPR002201; KEGG: abu:Abu_1822 lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; SPTR: A8EVT9 Lipopolysaccharide heptosyltransferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I
YP_003656411.1	COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: abu:Abu_1823 guanosine pentaphosphate phosphohydrolase (GppA); PFAM: Ppx/GppA phosphatase; SPTR: A8EVU0 Guanosine pentaphosphate phosphohydrolase (GppA); PFAM: Ppx/GppA phosphatase family
YP_003656412.1	InterPro IPR001450:IPR017896:IPR017900; KEGG: abu:Abu_1824 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EVU1 Ferredoxin
YP_003656413.1	COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR006006:IPR009051:IPR000759:IPR013027:IPR 012285; KEGG: abu:Abu_1826 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A8EVU3 Glutamate synthase, small chain; TIGRFAM: glutamate synthase, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial
YP_003656414.1	COGs: COG0069 Glutamate synthase domain 2; InterProIPR002489:IPR000583:IPR006982:IPR002932:IPR 017932:IPR013785; KEGG: abu:Abu_1827 glutamate synthase, large chain; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: A8EVU4 Glutamate synthase, large chain; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II
YP_003656415.1	COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682:IPR018389; KEGG: nam:NAMH_1492 C4-dicarboxylate-binding periplasmic protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: B9L694 C4-dicarboxylate-binding periplasmic protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_003656416.1	COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682:IPR018389; KEGG: nam:NAMH_1492 C4-dicarboxylate-binding periplasmic protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: B9L694 C4-dicarboxylate-binding periplasmic protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_003656417.1	COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: nam:NAMH_1493 small integral C4-dicarboxylate membrane transport protein,putative; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: B9L695 Small integral c4-dicarboxylate membrane transport protein,putative; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_003656418.1	COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: nam:NAMH_1494 C4-dicarboxylate transport system permease, large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: B9L696 C4-dicarboxylate transport system permease, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_003656419.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR004358:IPR013163:IPR005467; KEGG: abu:Abu_0362 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERR3 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003656420.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR011006:IPR016032:IPR001867:IPR 011991; KEGG: abu:Abu_0363 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ERR4 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656421.1	KEGG: abu:Abu_1828 hypothetical protein; SPTR: A8EVU5 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF540)
YP_003656422.1	InterPro IPR007197; KEGG: abu:Abu_1829 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: A8EVU6 Putative uncharacterized protein; PFAM: Radical SAM superfamily
YP_003656423.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014001:IPR001650:IPR011545:IPR014021:IPR 014014; KEGG: abu:Abu_1116 putative ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A8ETV2 Putative ATP-dependent RNA helicase RhlE; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003656424.1	KEGG: hypothetical protein; SPTR: B1HQH6 Chromosome partition protein smc
YP_003656425.1	COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055:IPR012337:IPR013520; KEGG: abu:Abu_1113 hypothetical protein; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: A8ETU9 Putative uncharacterized protein; PFAM: Exonuclease
YP_003656426.1	COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000160:IPR001633; KEGG: pmx:PERMA_0575 signal transduction response regulator; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; EAL domain protein; SPTR: C0QUK0 Signal transduction response regulator; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003656427.1	KEGG: pmx:PERMA_0577 hypothetical protein; SPTR: C1ZXR0 Putative uncharacterized protein
YP_003656428.1	InterPro IPR012910:IPR000531; KEGG: sul:SYO3AOP1_1604 hypothetical protein; PFAM: TonB-dependent receptor plug; SPTR: C1ZXQ9 TonB-dependent receptor family protein; PFAM: TonB-dependent Receptor Plug Domain
YP_003656429.1	COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: abu:Abu_0577 peptidase, ThiJ/PfpI family protein; PFAM: ThiJ/PfpI domain protein; SPTR: A8ESC0 Peptidase, ThiJ/PfpI family protein; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_003656430.1	COGs: COG1414 Transcriptional regulator; InterPro IPR000835:IPR014757; KEGG: mta:Moth_0417 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein MarR; SPTR: Q2RLE1 Transcriptional regulator, IclR family; PFAM: MarR family; Bacterial transcriptional regulator
YP_003656431.1	SPTR: A9QGZ0 Elongation factor 1-alpha (Fragment)
YP_003656432.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR015797:IPR020476:IPR000086; KEGG: abu:Abu_0795 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; SPTR: A8ESY6 MutT/nudix family protein; PFAM: NUDIX domain
YP_003656433.1	COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: ppr:PBPRA1007 putative cation efflux family protein; PFAM: cation efflux protein; SPTR: Q6LTF8 Putative cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003656434.1	COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: tye:THEYE_A1534 HD domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B6BKA7 HD-GYP domain; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_003656435.1	KEGG: dal:Dalk_5188 leucine rich repeat variant; SPTR: B8FE77 Leucine rich repeat variant
YP_003656436.1	COGs: COG2233 Xanthine/uracil permease; InterPro IPR006042:IPR006043; KEGG: wsu:WS0203 uracil permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: C2A016 Uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_003656437.1	COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR005765:IPR000836; KEGG: pmx:PERMA_1366 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: B6BGG7 Uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_003656438.1	COGs: COG2354 conserved hypothetical protein; InterPro IPR008526; KEGG: tdn:Suden_1370 hypothetical protein; PFAM: protein of unknown function DUF808; SPTR: Q30QT4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF808)
YP_003656439.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR004638:IPR016196:IPR001411:IPR011701; KEGG: rso:RSc1852 multidrug resistance transmembrane protein; PFAM: major facilitator superfamily MFS_1; SPTR: Q8XYB0 Probable multidrug resistance transmembrane protein; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein
YP_003656440.1	COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR003997:IPR006143; KEGG: vcj:VCD_002936 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: A2P4R2 Multidrug resistance protein VceA; PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A)
YP_003656441.1	COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: rso:RSc1854 putative outer membrane multidrug resistance lipoprotein; PFAM: outer membrane efflux protein; SPTR: Q8XYA8 Putative outer membrane multidrug resistance lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_003656442.1	COGs: COG1309 Transcriptional regulator; InterPro IPR009057:IPR001647:IPR012287; KEGG: ctt:CtCNB1_0912 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: B5SCI4 Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family
YP_003656443.1	InterPro IPR006620; KEGG: cps:CPS_1322 2OG-Fe(II) oxygenase family oxidoreductase; SMART: Prolyl 4-hydroxylase alpha subunit; SPTR: A6EZR8 Oxidoreductase, 2OG-Fe(II) oxygenase family protein
YP_003656444.1	COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterProIPR014732:IPR011060:IPR001754:IPR013785:IPR 018089; KEGG: abu:Abu_1848 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: A8EVW5 Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1
YP_003656445.1	COGs: COG0781 Transcription termination factor; InterPro IPR011605:IPR006027; KEGG: abu:Abu_1847 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44; SPTR: A8EVW4 N utilization substance protein B homolog; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_003656446.1	COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: abu:Abu_1846 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; PRIAM: Riboflavin synthase; SPTR: A8EVW3 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_003656447.1	COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006269:IPR006218:IPR013785; KEGG: abu:Abu_1845 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: A8EVW2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase
YP_003656448.1	COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037; KEGG: nis:NIS_1717 potassium uptake protein; PFAM: TrkA-N domain protein; SPTR: C1ZYR5 K+ transport system, NAD-binding component; PFAM: TrkA-N domain
YP_003656449.1	KEGG: sun:SUN_1597 hypothetical protein; SPTR: C1ZYR4 Putative uncharacterized protein
YP_003656450.1	COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932:IPR013785; KEGG: sun:SUN_1986 hypothetical protein; PFAM: ferredoxin-dependent glutamate synthase; SPTR: A6QBS0 Putative uncharacterized protein; PFAM: Conserved region in glutamate synthase
YP_003656451.1	InterPro IPR000620; KEGG: abu:Abu_1844 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A8EVW1 Conserved hypothetical membrane protein (DUF6); PFAM: EamA-like transporter family
YP_003656452.1	COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR005750:IPR013792:IPR001986; KEGG: abu:Abu_1843 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: A8EVW0 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003656453.1	KEGG: cju:C8J_1365 hypothetical protein; SPTR: A8FNC6 Putative uncharacterized protein
YP_003656454.1	InterPro IPR003615; KEGG: abu:Abu_1842 hypothetical protein; SMART: HNH nuclease; SPTR: A8EVV9 Putative uncharacterized protein
YP_003656455.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR011256:IPR009057:IPR020449:IPR 000005:IPR010499:IPR012287:IPR018062; KEGG: abu:Abu_0178 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8ER81 Transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003656456.1	KEGG: abu:Abu_1727 hypothetical protein; SPTR: A8EVK1 Putative uncharacterized protein
YP_003656457.1	COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR001775:IPR001814:IPR004846; KEGG: abu:Abu_1833 general secretion pathway protein D; PFAM: type II and III secretion system protein; SPTR: A8EVV0 General secretion pathway protein D; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein
YP_003656458.1	COGs: COG1739 conserved hypothetical protein; InterPro IPR020568:IPR001498; KEGG: abu:Abu_1834 hypothetical protein; PFAM: protein of unknown function UPF0029; SPTR: A8EVV1 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: conserved hypothetical protein TIGR00257
YP_003656459.1	COGs: COG1189 rRNA methylase; InterPro IPR002942:IPR004538:IPR013216; KEGG: abu:Abu_1835 hemolysin A; PFAM: RNA-binding S4 domain protein; Methyltransferase type 11; SMART: RNA-binding S4 domain protein; SPTR: A8EVV2 Hemolysin A; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein
YP_003656460.1	COGs: COG0196 FAD synthase; InterPro IPR002606:IPR015865:IPR015864:IPR014729; KEGG: abu:Abu_1836 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: Riboflavin kinase; FAD synthetase; SPTR: A8EVV3 Bifunctional riboflavin kinase/FAD synthase RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase
YP_003656461.1	InterPro IPR005271:IPR013216; KEGG: abu:Abu_1837 methyltransferase, putative; PFAM: Methyltransferase type 11; SPTR: A8EVV4 tRNA (cmo5U34)-methyltransferase; TIGRFAM: methyltransferase; PFAM: Methyltransferase domain; TIGRFAM: methyltransferase, putative
YP_003656462.1	COGs: COG1225 Peroxiredoxin; InterPro IPR012336:IPR000866:IPR017936:IPR012335; KEGG: abu:Abu_1838 bacterioferritin comigratory protein, alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: A8EVV5 Bacterioferritin comigratory protein, alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: AhpC/TSA family
YP_003656463.1	KEGG: abu:Abu_1839 hypothetical protein; SPTR: A8EVV6 Putative uncharacterized protein
YP_003656464.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR006094:IPR004113:IPR 016167:IPR016168; KEGG: abu:Abu_1840 glycolate oxidase; PFAM: FAD linked oxidase domain protein; SPTR: A8EVV7 Glycolate oxidase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_003656465.1	COGs: COG1295 membrane protein; InterPro IPR017039:IPR004664; KEGG: abu:Abu_1841 tRNA-processing ribonuclease BN; PFAM: ribonuclease BN; SPTR: A8EVV8 tRNA-processing ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_003656466.1	KEGG: dsa:Desal_0535 putative lipoprotein; SPTR: C6BXP4 Putative lipoprotein
YP_003656467.1	KEGG: rfr:Rfer_3975 hypothetical protein; SPTR: C2A0F0 Putative uncharacterized protein
YP_003656468.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR016039:IPR013747:IPR016038; KEGG: pay:PAU_02401 hypothetical protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; SPTR: C2A0F1 3-oxoacyl-(Acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
YP_003656469.1	KEGG: aap:NT05HA_1738 hypothetical protein; SPTR: C2A0F2 Putative uncharacterized protein
YP_003656470.1	KEGG: aap:NT05HA_1739 hypothetical protein; SPTR: C2A0F3 Putative uncharacterized protein
YP_003656471.1	KEGG: hba:Hbal_2899 hypothetical protein; SPTR: C2A0F8 Putative uncharacterized protein
YP_003656472.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR016039:IPR014030:IPR014031:IPR016038; KEGG: hba:Hbal_2898 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; SPTR: C2A0F9 3-oxoacyl-(Acyl-carrier-protein) synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_003656473.1	InterPro IPR009081; KEGG: dar:Daro_2373 acyl carrier protein; SPTR: Q47DH2 Acyl carrier protein
YP_003656474.1	COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR013525:IPR000412; KEGG: hba:Hbal_2896 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: C2A0G1 ABC-2 type transporter; PFAM: ABC-2 type transporter
YP_003656475.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cac:CAC2932 ABC-type MDR transporter, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C2A0G2 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter
YP_003656476.1	COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: fph:Fphi_1084 aconitate hydratase; PFAM: AMP-dependent synthetase and ligase; SPTR: C2A0G4 Acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme
YP_003656477.1	COGs: COG4258 exporter; InterPro IPR000731; KEGG: hhe:HH0539 hypothetical protein; SPTR: C2A0G5 Putative uncharacterized protein
YP_003656478.1	KEGG: conserved hypothetical protein; SPTR: C2A0G6 Putative uncharacterized protein
YP_003656479.1	KEGG: kko:Kkor_2576 hypothetical protein; SPTR: C2A0G7 Putative uncharacterized protein
YP_003656480.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002347:IPR002198; KEGG: bpi:BPLAN_576 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: B6BHA9 3-oxoacyl-(Acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase
YP_003656481.1	COGs: COG2986 Histidine ammonia-lyase; InterPro IPR008948:IPR001106; KEGG: sbm:Shew185_0334 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: C2A0G9 Histidine ammonia-lyase; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase
YP_003656482.1	COGs: COG4261 acyltransferase; KEGG: bhy:BHWA1_00288 glycosyl transferase, family 2; lipid A biosynthesis acyltransferase family; SPTR: C2A0H0 Predicted acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_003656483.1	InterPro IPR001173; KEGG: fps:FP2257 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: C2A0H1 Glycosyl transferase; PFAM: Glycosyl transferase family 2
YP_003656484.1	KEGG: fps:FP2259 dehydratase; SPTR: C2A0H2 3-hydroxyacyl-(Acyl-carrier-protein) dehydratase
YP_003656485.1	InterPro IPR009081; KEGG: bvu:BVU_1019 acyl carrier protein; SPTR: C2A0E5 Putative uncharacterized protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_003656486.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR016039:IPR014030:IPR014031:IPR016038; KEGG: mca:MCA0924 3-oxoacyl-(acyl carrier protein) synthase I; PFAM: Beta-ketoacyl synthase; SPTR: C2A0E6 3-oxoacyl-(Acyl-carrier-protein) synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_003656487.1	KEGG: fph:Fphi_1089 hypothetical protein; SPTR: C2A0E7 Putative uncharacterized protein
YP_003656488.1	KEGG: dps:DP1846 acyl carrier protein dehydratase; SPTR: B6BHC6 Putative uncharacterized protein
YP_003656489.1	InterPro IPR013217; KEGG: slo:Shew_2384 O-methyltransferase family protein; PFAM: Methyltransferase type 12; SPTR: B3CGM4 Putative uncharacterized protein; PFAM: O-methyltransferase
YP_003656490.1	COGs: COG0775 Nucleoside phosphorylase; InterPro IPR010049:IPR000845; KEGG: abu:Abu_1585 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1; PRIAM: Adenosylhomocysteine nucleosidase; SPTR: A8EV60 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; TIGRFAM: MTA/SAH nucleosidase; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_003656491.1	COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterProIPR004410:IPR016035:IPR016036:IPR014043:IPR 001227; KEGG: abu:Abu_1586 malonyl coenzyme A-(acyl carrier protein) transacylase; PFAM: Acyl transferase; SPTR: A8EV61 Malonyl coenzyme A-(Acyl carrier protein) transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_003656492.1	COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: abu:Abu_1587 peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: A8EV62 Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_003656493.1	InterPro IPR019734:IPR013105:IPR013026:IPR011990; KEGG: abu:Abu_1588 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: A8EV63 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_003656494.1	COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR006664; KEGG: abu:Abu_1589 OmpA/MotB precursor; PFAM: OmpA/MotB domain protein; SPTR: A8EV64 OmpA/MotB; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein
YP_003656495.1	COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR007195:IPR011042:IPR000215; KEGG: abu:Abu_1590 translocation protein TolB; PFAM: TolB domain protein; SPTR: A8EV65 Colicin tolerance-like protein (TolB); PFAM: TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB
YP_003656496.1	KEGG: abu:Abu_1591 hypothetical protein; SPTR: A8EV66 Putative uncharacterized protein
YP_003656497.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: abu:Abu_1592 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8EV67 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR
YP_003656498.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: abu:Abu_1593 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8EV68 Biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family
YP_003656499.1	COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR001469:IPR020546; KEGG: abu:Abu_1594 F0F1 ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: A8EV69 ATP synthase epsilon chain; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_003656500.1	COGs: COG0055 F0F1-type ATP synthase beta subunit; InterProIPR003593:IPR005722:IPR000793:IPR018118:IPR 004100:IPR000194:IPR020003; KEGG: abu:Abu_1595 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SMART: AAA ATPase; SPTR: A8EV70 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit
YP_003656501.1	COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: abu:Abu_1596 F0F1 ATP synthase subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: A8EV71 ATP synthase gamma chain; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_003656502.1	COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterProIPR005294:IPR000793:IPR018118:IPR004100:IPR 000194:IPR020003; KEGG: abu:Abu_1597 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SPTR: A8EV72 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit
YP_003656503.1	COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); InterPro IPR000711; KEGG: abu:Abu_1598 F0F1 ATP synthase subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: A8EV73 ATP synthase subunit delta; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit
YP_003656504.1	InterPro IPR002146; KEGG: abu:Abu_1599 ATP synthase F0 sector, subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: A8EV74 ATP synthase subunit b; PFAM: ATP synthase B/B' CF(0)
YP_003656505.1	InterPro IPR002146; KEGG: abu:Abu_1600 ATP synthase F0 sector, B' subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: A8EV75 ATP synthase F0 sector, B' subunit; PFAM: ATP synthase B/B' CF(0)
YP_003656506.1	COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: abu:Abu_1601 transcriptional regulator involved in chromosome partitioning ParB; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: A8EV76 Transcriptional regulator involved in chromosome partitioning ParB; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_003656507.1	COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR000392:IPR002586; KEGG: abu:Abu_1602 ATPases involved in chromosome partitioning ParA; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A8EV77 ATPases involved in chromosome partitioning ParA; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003656508.1	COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408:IPR004143; KEGG: abu:Abu_1603 biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: A8EV78 Biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_003656509.1	COGs: COG0679 permease; InterPro IPR004776; KEGG: abu:Abu_1605 auxin efflux carrier protein; PFAM: Auxin Efflux Carrier; SPTR: A8EV80 Auxin efflux carrier protein; PFAM: Membrane transport protein
YP_003656510.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003661:IPR003594:IPR009082:IPR003018:IPR 005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EVB1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003656511.1	COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR011034:IPR005793; KEGG: abu:Abu_1606 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: A8EV81 10-formyltetrahydrofolate:L-methionyl-tRNA(FMet) N-formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_003656512.1	COGs: COG0263 Glutamate 5-kinase; InterProIPR005715:IPR001048:IPR001057:IPR011529:IPR 019797; KEGG: abu:Abu_1607 gamma-glutamyl kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Glutamate 5-kinase; SPTR: A8EV82 Glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: Amino acid kinase family; TIGRFAM: glutamate 5-kinase
YP_003656513.1	COGs: COG0536 GTPase; InterProIPR014100:IPR006169:IPR006073:IPR002917:IPR 006074; KEGG: abu:Abu_1608 GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; SPTR: A8EV83 GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA
YP_003656514.1	COGs: COG0211 Ribosomal protein L27; InterPro IPR001684:IPR018261; KEGG: nam:NAMH_1402 ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: A6DD71 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_003656515.1	COGs: COG0261 Ribosomal protein L21; InterPro IPR001787:IPR018258; KEGG: abu:Abu_1610 50S ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: A8EV85 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_003656516.1	COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR013813:IPR006175:IPR019897; KEGG: wsu:WS0502 translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: C3XM82 Translation initiation inhibitor; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_003656517.1	COGs: COG0358 DNA primase; InterProIPR002694:IPR006154:IPR006295:IPR013264:IPR 006171; KEGG: abu:Abu_1611 DNA primase; PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; SPTR: A8EV86 DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core
YP_003656518.1	InterPro IPR019734:IPR013026:IPR011990; KEGG: abu:Abu_1612 hypothetical protein; SPTR: A8EV87 Putative uncharacterized protein
YP_003656519.1	COGs: COG0328 Ribonuclease HI; InterPro IPR012337:IPR002156; KEGG: tdn:Suden_2025 ribonuclease H; PFAM: ribonuclease H; SPTR: Q30NY2 RNase HI; PFAM: RNase H
YP_003656520.1	COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR000999:IPR001159:IPR011907:IPR014720; KEGG: abu:Abu_1613 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: Ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: A8EV88 Ribonuclease 3; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial
YP_003656521.1	COGs: COG0082 Chorismate synthase; InterPro IPR000453:IPR020541; KEGG: abu:Abu_1614 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: A8EV89 Chorismate synthase; TIGRFAM: chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_003656522.1	COGs: COG1342 DNA-binding protein; InterPro IPR002852; KEGG: nth:Nther_2417 protein of unknown function DUF134; PFAM: protein of unknown function DUF134; SPTR: C2A0P4 Predicted DNA-binding protein; PFAM: Protein of unknown function DUF134
YP_003656523.1	COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: abu:Abu_1616 M48 family peptidase; PFAM: peptidase M48 Ste24p; SPTR: A8EV91 Probable protease htpX homolog; PFAM: Peptidase family M48
YP_003656524.1	COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: abu:Abu_1618 phosphoglycerate/bisphosphoglycerate mutase, putative; PFAM: Phosphoglycerate mutase; SPTR: A8EV93 Phosphoglycerate/bisphosphoglycerate mutase, putative; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA
YP_003656525.1	COGs: COG2081 flavoprotein; InterPro IPR013027:IPR004792; KEGG: sun:SUN_1167 hypothetical protein; PFAM: HI0933 family protein; SPTR: B6BNB7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275
YP_003656526.1	COGs: COG0486 GTPase; InterProIPR004520:IPR005225:IPR006073:IPR018948:IPR 002917; KEGG: abu:Abu_1620 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; SPTR: A8EV95 tRNA modification GTPase mnmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE
YP_003656527.1	KEGG: abu:Abu_1621 hypothetical protein; SPTR: A8EV96 Putative uncharacterized protein
YP_003656528.1	COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR019998:IPR020001:IPR001708:IPR013308; KEGG: abu:Abu_1622 putative inner membrane protein translocase component YidC; PFAM: 60 kDa inner membrane insertion protein; SPTR: A8EV97 Inner membrane protein, 60 kDa; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain
YP_003656529.1	COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: abu:Abu_1623 hypothetical protein; PFAM: protein of unknown function DUF37; SPTR: A8EV98 UPF0161 protein Abu_1623; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278
YP_003656530.1	COGs: COG0594 RNase P protein component; InterPro IPR000100:IPR020568:IPR014721:IPR020539; KEGG: sun:SUN_1572 ribonuclease P protein component; PFAM: ribonuclease P protein; SPTR: A6QAL3 Ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_003656531.1	InterPro IPR000271; KEGG: abu:Abu_1625 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: C5ZXI7 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type
YP_003656532.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR001270:IPR004176:IPR003959:IPR 013093:IPR019489:IPR018368; KEGG: abu:Abu_1626 ATP-dependent Clp protease, ATP-binding subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8EVA0 ATP-dependent Clp protease, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_003656533.1	COGs: COG0164 Ribonuclease HII; InterPro IPR012337:IPR001352; KEGG: abu:Abu_1627 ribonuclease HII; PFAM: ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: A8EVA1 Ribonuclease HII; PFAM: Ribonuclease HII
YP_003656534.1	InterPro IPR006620:IPR005123; KEGG: mlo:mlr4439 hypothetical protein; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; SPTR: A6D9X4 Putative uncharacterized protein; PFAM: 2OG-Fe(II) oxygenase superfamily
YP_003656535.1	KEGG: mac:MA2224 transposase A; SPTR: Q8TNQ9 Transposase A
YP_003656536.1	COGs: COG0011 conserved hypothetical protein; InterPro IPR002767:IPR016198; KEGG: abu:Abu_1628 hypothetical protein; PFAM: protein of unknown function DUF77; SPTR: A8EVA2 Putative uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106
YP_003656537.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: pin:Ping_1880 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: B6BGG5 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003656538.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR003661:IPR003594:IPR009082:IPR004358:IPR 013163:IPR013655:IPR005467; KEGG: abu:Abu_0102 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ER13 Sensor protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box
YP_003656539.1	KEGG: abu:Abu_1630 hypothetical protein; SPTR: A8EVA4 Putative uncharacterized protein
YP_003656540.1	COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569:IPR011057:IPR002579; KEGG: cli:Clim_1371 bifunctional methionine sulfoxide reductase B/A protein; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B; SPTR: Q0YRA3 Peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase
YP_003656541.1	COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR011234:IPR002529; KEGG: abu:Abu_1633 fumarylacetoacetate (FAA) hydrolase; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR: A8EVA7 Fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_003656542.1	InterPro IPR000835:IPR011991; KEGG: cpy:Cphy_2661 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A9KN11 Transcriptional regulator, MarR family; PFAM: MarR family
YP_003656543.1	COGs: COG0386 Glutathione peroxidase; InterPro IPR012336:IPR000889:IPR012335; KEGG: cpy:Cphy_2662 glutathione peroxidase; PFAM: glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: A9KN12 Glutathione peroxidase; PFAM: Glutathione peroxidase
YP_003656544.1	COGs: COG2259 membrane protein; InterPro IPR011637; KEGG: sun:SUN_2352 hypothetical protein; PFAM: DoxX family protein; SPTR: A6QCS9 Putative uncharacterized protein; PFAM: DoxX
YP_003656545.1	InterPro IPR009710; KEGG: abu:Abu_1634 hypothetical protein; PFAM: protein of unknown function DUF1291; SPTR: A8EVA8 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_003656546.1	InterPro IPR015797:IPR000086; KEGG: abu:Abu_1635 phosphohydrolase (MutT/NUDIX family protein); PFAM: NUDIX hydrolase; SPTR: A8EVA9 Phosphohydrolase (MUTT/NUDIX family protein); PFAM: NUDIX domain
YP_003656547.1	COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005815:IPR015424:IPR005814:IPR015421; KEGG: abu:Abu_1636 7,8-diaminopelargonic acid synthetase; PFAM: aminotransferase class-III; SPTR: A8EVB0 7,8-diaminopelargonic acid synthetase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_003656548.1	COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterProIPR001638:IPR003594:IPR009082:IPR004358:IPR 015168:IPR005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: NMT1/THI5 like domain protein; extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; SPTR: A8EVB1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Bacterial extracellular solute-binding proteins, family 3; NMT1/THI5 like
YP_003656549.1	InterPro IPR016196:IPR011701:IPR005829; KEGG: wsu:WS1952 transmembrane transport protein-permease; PFAM: major facilitator superfamily MFS_1; SPTR: Q7M811 TRANSMEMBRANE TRANSPORT PROTEIN-PERMEASE; PFAM: Major Facilitator Superfamily
YP_003656550.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: tdn:Suden_0269 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Q30TY1 Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003656551.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: sun:SUN_0073 sulfide-quinone reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B6BHD2 Sulfide-quinone reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003656552.1	KEGG: sun:SUN_2071 hypothetical protein; SPTR: A6QC03 Putative uncharacterized protein
YP_003656553.1	COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: abu:Abu_1457 high-affinity choline transport; PFAM: BCCT transporter; SPTR: A8EUT8 High-affinity choline transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003656554.1	COGs: COG2153 acyltransferase; InterPro IPR016181:IPR000182; KEGG: dat:HRM2_25850 putative acetyltransferase (GNAT family protein); PFAM: GCN5-related N-acetyltransferase; SPTR: A3Y5H8 Probable acetyltransferase YybD; PFAM: Acetyltransferase (GNAT) family
YP_003656555.1	COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: swp:swp_3291 gluconate transporter; PFAM: Gluconate transporter; SPTR: C1ZXL1 H+/gluconate symporter family protein; PFAM: GntP family permease; TIGRFAM: gluconate transporter
YP_003656556.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057:IPR000005; KEGG: wsu:WS0114 putative transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C2A3A6 DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003656557.1	COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: hpy:HP1484 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A4VHK7 Membrane protein; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: conserved hypothetical integral membrane protein
YP_003656558.1	KEGG: abu:Abu_1417 hypothetical protein; SPTR: A8EUP8 Putative uncharacterized protein
YP_003656559.1	InterPro IPR001763; KEGG: deb:DehaBAV1_1201 rhodanese domain-containing protein; SMART: Rhodanese domain protein; SPTR: C0YKU5 Rhodanese-like domain protein; PFAM: Rhodanese-like domain
YP_003656560.1	COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR013982:IPR002695:IPR011607; KEGG: abu:Abu_1638 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: IMP cyclohydrolase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: A8EVB2 Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_003656561.1	COGs: COG0004 Ammonia permease; InterPro IPR000160:IPR001905:IPR018047; KEGG: tcx:Tcr_2151 ammonium transporter; PFAM: ammonium transporter; GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q1K433 Ammonium transporter; TIGRFAM: ammonium transporter; diguanylate cyclase; PFAM: Ammonium Transporter Family; GGDEF domain; TIGRFAM: ammonium transporter; diguanylate cyclase (GGDEF) domain
YP_003656562.1	COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR011095:IPR011761:IPR013816; KEGG: tle:Tlet_0834 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; SPTR: B6BIH9 Putative uncharacterized protein; PFAM: D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_003656563.1	COGs: COG2836 conserved hypothetical protein; KEGG: abu:Abu_1099 hypothetical protein; SPTR: A8ETT5 Putative uncharacterized protein
YP_003656564.1	COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR010074:IPR010918:IPR016188:IPR000728; KEGG: abu:Abu_1639 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: A8EVB3 Phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II
YP_003656565.1	COGs: COG3034 conserved hypothetical protein; InterPro IPR005490; KEGG: abu:Abu_1640 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: A8EVB4 Putative uncharacterized protein; PFAM: L,D-transpeptidase catalytic domain
YP_003656566.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR016047; KEGG: abu:Abu_1641 M24/M37 family peptidase; PFAM: Peptidase M23; SPTR: A8EVB5 Peptidase, M23/M37 family; PFAM: Peptidase family M23
YP_003656567.1	COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006669:IPR006668:IPR000644:IPR006667; KEGG: nis:NIS_0344 magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SPTR: A6Q1U9 Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE)
YP_003656568.1	KEGG: hypothetical protein; SPTR: Q9N504 Putative uncharacterized protein C33E10.6
YP_003656569.1	COGs: COG0302 GTP cyclohydrolase I; InterPro IPR001474:IPR020602:IPR018234; KEGG: abu:Abu_1642 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: A8EVB6 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_003656570.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004:IPR018076; KEGG: abu:Abu_1644 transformation system protein CtsF; PFAM: Type II secretion system F domain; SPTR: A8EVB8 Transformation system protein CtsF; PFAM: Bacterial type II secretion system protein F domain
YP_003656571.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593:IPR001482; KEGG: abu:Abu_1645 transformation system protein CtsE; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: A8EVB9 Transformation system protein CtsE; PFAM: Type II/IV secretion system protein
YP_003656572.1	KEGG: hypothetical protein; SPTR: Q4Z6N1 Putative uncharacterized protein (Fragment)
YP_003656573.1	KEGG: abu:Abu_1695 hypothetical protein; SPTR: A8EVG9 Putative uncharacterized protein
YP_003656574.1	COGs: COG1159 GTPase; InterProIPR005225:IPR005662:IPR009019:IPR002917:IPR 004044:IPR015946; KEGG: abu:Abu_1696 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; SPTR: A8EVH0 GTP-binding protein Era-like protein; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_003656575.1	COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482:IPR020568:IPR000523:IPR002078; KEGG: abu:Abu_1698 Mg chelatase-related protein; PFAM: magnesium chelatase ChlI subunit; SPTR: A8EVH2 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_003656576.1	COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: abu:Abu_1700 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: A8EVH4 Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_003656577.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215:IPR001907; KEGG: abu:Abu_1701 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: A8EVH5 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_003656578.1	COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR001179:IPR005215:IPR008881:IPR008880; KEGG: abu:Abu_1702 trigger factor; PFAM: trigger factor domain; peptidylprolyl isomerase FKBP-type; trigger factor domain protein; SPTR: A8EVH6 Trigger factor; TIGRFAM: trigger factor; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_003656579.1	InterProIPR019734:IPR002035:IPR013026:IPR011990:IPR 001440; KEGG: tdn:Suden_0657 von Willebrand factor, type A; PFAM: von Willebrand factor type A; TPR repeat-containing protein; SMART: von Willebrand factor type A; Tetratricopeptide repeat; SPTR: Q30SU5 von Willebrand factor, type A; PFAM: Tetratricopeptide repeat
YP_003656580.1	COGs: COG2326 conserved hypothetical protein; InterPro IPR016898:IPR005660; KEGG: abu:Abu_1703 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: A8EVH7 Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2)
YP_003656581.1	COGs: COG2326 conserved hypothetical protein; InterPro IPR016898:IPR005660; KEGG: abu:Abu_1704 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: A8EVH8 Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2)
YP_003656582.1	COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR009006:IPR005730:IPR000183; KEGG: abu:Abu_1705 carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: A8EVH9 Carboxynorspermidine decarboxylase; TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase
YP_003656583.1	COGs: COG1773 Rubredoxin; InterPro IPR004039:IPR018527:IPR001052; KEGG: sun:SUN_1757 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: A6QB45 Rubredoxin; PFAM: Rubredoxin
YP_003656584.1	COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR016040:IPR005097; KEGG: abu:Abu_1706 saccharopine dehydrogenase (L-lysine-forming); PFAM: Saccharopine dehydrogenase; SPTR: A8EVI0 Saccharopine dehydrogenase (L-lysine-forming); PFAM: Saccharopine dehydrogenase
YP_003656585.1	COGs: COG0625 Glutathione S-transferase; InterProIPR004045:IPR017933:IPR012335:IPR010987:IPR 012336; KEGG: smt:Smal_4025 glutathione S-transferase domain; PFAM: Glutathione S-transferase domain; SPTR: B4SPE2 Glutathione S-transferase domain; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_003656586.1	COGs: COG4564 Signal transduction histidine kinase; InterPro IPR004089:IPR010916:IPR013163; KEGG: abu:Abu_1307 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EUE0 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003656587.1	InterPro IPR002934; KEGG: mex:Mext_4883 DNA polymerase beta subunit; PFAM: DNA polymerase beta domain protein region; SPTR: A9W9L2 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain
YP_003656588.1	KEGG: eat:EAT1b_2759 phosphoesterase HXTX; SPTR: C4L588 Phosphoesterase HXTX
YP_003656589.1	COGs: COG3621 Patatin; InterPro IPR016035:IPR002641; KEGG: shn:Shewana3_4351 patatin; PFAM: Patatin; SPTR: A0L3D3 Patatin; PFAM: Patatin-like phospholipase
YP_003656590.1	KEGG: IBR domain containing protein; SPTR: Q9F554 Relaxosome component; PFAM: Ribbon-helix-helix protein, copG family
YP_003656591.1	KEGG: nam:NAMH_1184 bacteriophage replication gene A protein (GPA); SPTR: B9LAC0 Bacteriophage replication gene A protein (GPA)
YP_003656592.1	KEGG: cef:CE0834 hypothetical protein; SPTR: D0DYR5 Holo-(Acyl-carrier-protein) synthase
YP_003656593.1	COGs: COG3311 transcriptional regulator protein; InterPro IPR009061:IPR010260; KEGG: asa:ASA_3675 hypothetical protein; PFAM: Prophage CP4-57 regulatory; SPTR: A4SRW4 Putative uncharacterized protein; PFAM: Prophage CP4-57 regulatory protein (AlpA)
YP_003656594.1	COGs: COG3550 conserved hypothetical protein; InterPro IPR017508:IPR012894:IPR012893; KEGG: sun:SUN_1606 hypothetical protein; PFAM: HipA domain protein; SPTR: A6QAP7 Putative uncharacterized protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain
YP_003656595.1	InterPro IPR001387:IPR010982; KEGG: sun:SUN_1605 Cro/CI family transcriptional regulator-related protein; SPTR: A6QAP6 Transcriptional regulator, Cro/CI/xre family; PFAM: Helix-turn-helix
YP_003656596.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014:IPR000160:IPR015168:IPR013656; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: NMT1/THI5 like domain protein; PAS fold-4 domain protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; PAS domain containing protein; SPTR: B6BNR7 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; PAS fold; NMT1/THI5 like; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_003656597.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021:IPR001650:IPR014014:IPR000629:IPR 011545:IPR014001; KEGG: abu:Abu_1479 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B6BHW1 Putative helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003656598.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR000014:IPR000700:IPR003594:IPR 013655:IPR001610:IPR004358; KEGG: cff:CFF8240_0376 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; SPTR: A0RMZ5 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box
YP_003656599.1	COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: abu:Abu_0418 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ERW9 Two-component response regulator; PFAM: Response regulator receiver domain
YP_003656600.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004090; KEGG: abu:Abu_0417 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8ERW8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003656601.1	KEGG: cma:Cmaq_0189 hypothetical protein; SPTR: A8MAA6 Putative uncharacterized protein
YP_003656602.1	KEGG: hypothetical protein; SPTR: C4G4T7 Putative uncharacterized protein
YP_003656603.1	COGs: COG4378 conserved hypothetical protein; InterPro IPR016772; KEGG: abu:Abu_1767 hypothetical protein; PFAM: Uncharacterised conserved protein UCP020408; SPTR: A8EVP0 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2325)
YP_003656604.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: abu:Abu_1770 ferric uptake regulation protein; PFAM: ferric-uptake regulator; SPTR: A8EVP3 Ferric uptake regulation protein; PFAM: Ferric uptake regulator family
YP_003656605.1	COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: nam:NAMH_0401 hypothetical protein; PFAM: FeoA family protein; SPTR: B9L866 Conserved domain protein; PFAM: FeoA domain
YP_003656606.1	COGs: COG0370 Fe2+ transport system protein B; InterProIPR000629:IPR005225:IPR003373:IPR002917:IPR 011619:IPR011642:IPR011640; KEGG: abu:Abu_0551 ferrous iron transport protein B; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; SPTR: A8ES94 Ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain
YP_003656607.1	KEGG: abu:Abu_1771 hypothetical protein; SPTR: A8EVP4 Putative uncharacterized protein
YP_003656608.1	COGs: COG2935 Putative arginyl-tRNA:protein arginylyltransferase; InterPro IPR017138:IPR007471:IPR007472; KEGG: abu:Abu_1772 arginyl-tRNA-protein transferase; PFAM: Arginine-tRNA-protein transferase domain protein; PRIAM: Arginyltransferase; SPTR: A8EVP5 Putative arginyl-tRNA--protein transferase; PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus
YP_003656609.1	COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR013785:IPR011060:IPR018204:IPR002028; KEGG: abu:Abu_1773 tryptophan synthase, alpha chain; PFAM: tryptophan synthase alpha chain; SPTR: A8EVP6 Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_003656610.1	InterPro IPR011462; KEGG: tdn:Suden_1725 hypothetical protein; PFAM: protein of unknown function DUF1568; SPTR: Q30PT2 Putative uncharacterized protein; PFAM: Transposase IS200 like
YP_003656611.1	KEGG: hypothetical protein; SPTR: Q0Q0I3 TatC
YP_003656612.1	KEGG: mac:MA3805 hypothetical protein; SPTR: Q8TJH9 Putative uncharacterized protein
YP_003656613.1	COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700:IPR015813; KEGG: abu:Abu_1775 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: A8EVP8 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_003656614.1	COGs: COG2255 Holliday junction resolvasome helicase subunit; InterProIPR008823:IPR011991:IPR004605:IPR008824:IPR 003959:IPR003593; KEGG: abu:Abu_1776 Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; SPTR: A8EVP9 Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_003656615.1	COGs: COG0628 permease; InterPro IPR002549; KEGG: abu:Abu_1777 acid membrane antigen A; PFAM: protein of unknown function UPF0118; SPTR: A8EVQ0 Acid membrane antigen A; PFAM: Domain of unknown function DUF20
YP_003656616.1	COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR001611:IPR003591; KEGG: lil:LA3321 leucine-rich repeat-containing protein; PFAM: leucine-rich repeat protein; SPTR: Q8F118 Leucine-rich repeat containing protein; PFAM: Leucine Rich Repeat
YP_003656617.1	InterPro IPR001623; KEGG: sea:SeAg_B0612 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: C5S2U1 Putative uncharacterized protein; PFAM: DnaJ domain
YP_003656618.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763:IPR004209; KEGG: abu:Abu_1778 hypothetical protein; SMART: Rhodanese domain protein; SPTR: A8EVQ1 Putative uncharacterized protein; PFAM: Ferredoxin thioredoxin reductase catalytic beta chain; Rhodanese-like domain
YP_003656619.1	InterPro IPR009056; KEGG: abu:Abu_1919 cytochrome c; SPTR: A8EW18 Cytochrome c; PFAM: Cytochrome c
YP_003656620.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR018368:IPR001270:IPR013461:IPR004176:IPR 003959:IPR013093:IPR019489:IPR003593; KEGG: abu:Abu_1920 ATP-dependent Clp protease, ATP-binding subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8EW19 ATP-dependent Clp protease, ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA
YP_003656621.1	COGs: COG2127 conserved hypothetical protein; InterPro IPR014719:IPR003769; KEGG: abu:Abu_1921 ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS; SPTR: A8EW20 ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS
YP_003656622.1	COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: abu:Abu_1922 dethiobiotin synthetase; PRIAM: Dethiobiotin synthase; SPTR: A8EW21 Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase
YP_003656623.1	COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR018042:IPR001341; KEGG: mcl:MCCL_0984 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Aspartate kinase; SPTR: A6C2D9 Aspartokinase; TIGRFAM: aspartate kinase; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase
YP_003656624.1	InterPro IPR010462:IPR011051; KEGG: hna:Hneap_0196 ectoine synthase; PFAM: Ectoine synthase; PRIAM: Ectoine synthase; SPTR: C0H1E8 Ectoine synthase; PFAM: Ectoine synthase
YP_003656625.1	COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterProIPR015421:IPR015424:IPR005814:IPR004637:IPR 012773; KEGG: dol:Dole_0961 diaminobutyrate--2-oxoglutarate aminotransferase; PFAM: aminotransferase class-III; SPTR: A8ZWG3 Diaminobutyrate--2-oxoglutarate aminotransferase; TIGRFAM: diaminobutyrate/2-oxoglutarate aminotransferase; 2,4-diaminobutyrate 4-transaminase; PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase
YP_003656626.1	InterPro IPR000182:IPR016181:IPR012772; KEGG: hch:HCH_01510 histone acetyltransferase HPA2-like acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: Diaminobutyrate acetyltransferase; SPTR: B6BTZ3 L-2,4-diaminobutyric acid acetyltransferase; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase
YP_003656627.1	KEGG: wsu:WS0858 hypothetical protein; SPTR: B6BHG8 Putative uncharacterized protein
YP_003656628.1	InterPro IPR016196:IPR018181:IPR011701; KEGG: abu:Abu_1937 putative integral membrane protein; PFAM: major facilitator superfamily MFS_1; SPTR: A8EW36 Putative integral membrane protein; PFAM: Major Facilitator Superfamily
YP_003656629.1	KEGG: nis:NIS_1069 hypothetical protein; SPTR: A6Q3X0 Putative uncharacterized protein
YP_003656630.1	KEGG: nam:NAMH_0433 hypothetical protein; SPTR: B9L893 Putative uncharacterized protein
YP_003656631.1	COGs: COG1298 Flagellar biosynthesis pathway component FlhA; InterPro IPR006301:IPR001712; KEGG: abu:Abu_1938 flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; SPTR: A8EW37 Flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA
YP_003656632.1	COGs: COG1344 Flagellin and related hook-associated protein; KEGG: abu:Abu_1939 flagellar hook-associated protein FlgL; SPTR: A8EW38 Flagellar hook-associated protein FlgL; PFAM: Bacterial flagellin N-terminal helical region
YP_003656633.1	COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR005714:IPR018538:IPR000194:IPR003593; KEGG: abu:Abu_1940 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; HerA-ATP synthase, barrel domain; PRIAM: H(+)-transporting two-sector ATPase; SMART: AAA ATPase; SPTR: A8EW39 Flagellum-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family
YP_003656634.1	KEGG: abu:Abu_1941 TPR repeat-containing protein; SPTR: A8EW40 Tetratricopeptide repeat domain protein
YP_003656635.1	COGs: COG1377 Flagellar biosynthesis pathway component FlhB; InterPro IPR006136:IPR006135; KEGG: abu:Abu_1942 flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; SPTR: A8EW41 Flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB
YP_003656636.1	COGs: COG1684 Flagellar biosynthesis pathway component FliR; InterPro IPR002010; KEGG: abu:Abu_1943 flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; SPTR: A8EW42 Flagellar biosynthetic protein FliR; PFAM: Bacterial export proteins, family 1
YP_003656637.1	KEGG: abu:Abu_1944 hypothetical protein; SPTR: A8EW43 Hypothetical membrane protein
YP_003656638.1	COGs: COG1558 Flagellar basal body rod protein; InterPro IPR006299:IPR001444:IPR010930; KEGG: abu:Abu_1945 flagellar basal body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: A8EW44 Flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC
YP_003656639.1	InterPro IPR001624; KEGG: abu:Abu_1946 flagellar hook-basal body protein FliE; PFAM: flagellar hook-basal body complex protein FliE; SPTR: A8EW45 Flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE
YP_003656640.1	KEGG: abu:Abu_1947 hypothetical protein; SPTR: A8EW46 Putative uncharacterized protein
YP_003656641.1	COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: abu:Abu_1948 ATP-binding protein; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A8EW47 ATP-binding protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003656642.1	COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR020006:IPR000897:IPR003593; KEGG: abu:Abu_1949 flagellar biosynthesis (GTP-binding) protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; SPTR: A8EW48 Flagellar biosynthesis (GTP-binding) protein FlhF; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF
YP_003656643.1	KEGG: abu:Abu_1950 hypothetical protein; SPTR: A8EW49 Putative uncharacterized protein
YP_003656644.1	KEGG: abu:Abu_1951 hypothetical protein; SPTR: A8EW50 Putative uncharacterized protein
YP_003656645.1	KEGG: abu:Abu_1952 hypothetical protein; SPTR: A8EW51 Putative uncharacterized protein; PFAM: Rod binding protein
YP_003656646.1	COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: nam:NAMH_1161 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: A6DAM6 OmpA/MotB; PFAM: OmpA family
YP_003656647.1	COGs: COG1291 Flagellar motor component; InterPro IPR002898; KEGG: cco:CCC13826_0691 permease; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A7ZCS9 Chemotaxis protein PomA; PFAM: MotA/TolQ/ExbB proton channel family
YP_003656648.1	COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR001543:IPR001172; KEGG: abu:Abu_1953 flagellar motor switch protein FliY; PFAM: surface presentation of antigens (SPOA) protein; SPTR: A8EW52 Flagellar motor switch protein FliY; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN
YP_003656649.1	KEGG: abu:Abu_1954 polar flagellin; SPTR: A8EW53 Polar flagellin
YP_003656650.1	InterPro IPR019734:IPR013026:IPR001440; KEGG: abu:Abu_1955 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: A8EW54 TPR repeat protein; PFAM: Tetratricopeptide repeat
YP_003656651.1	KEGG: abu:Abu_1956 hypothetical protein; SPTR: A8EW55 Putative uncharacterized protein
YP_003656652.1	COGs: COG4786 Flagellar basal body rod protein; InterPro IPR020013:IPR001444:IPR010930; KEGG: abu:Abu_1957 flagellar hook protein FlgE; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8EW56 Flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins
YP_003656653.1	COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR019776:IPR020013:IPR001444:IPR010930; KEGG: abu:Abu_1958 flagellar hook protein FlgE; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8EW57 Flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins
YP_003656654.1	InterPro IPR005648; KEGG: abu:Abu_1959 flagellar hook assembly protein FlgD; PFAM: flagellar hook capping protein; SPTR: A8EW58 Flagellar hook assembly protein FlgD; PFAM: Flagellar hook capping protein
YP_003656655.1	COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR001543:IPR001172; KEGG: abu:Abu_1960 flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; SPTR: A8EW59 Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN
YP_003656656.1	InterPro IPR018035; KEGG: abu:Abu_1961 flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; SPTR: A8EW60 Flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH
YP_003656657.1	COGs: COG1536 Flagellar motor switch protein; InterPro IPR011002:IPR000090:IPR006668; KEGG: abu:Abu_1962 flagellar motor switch protein G; PFAM: flagellar motor switch protein FliG; MgtE intracellular region; SPTR: A8EW61 Flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG
YP_003656658.1	COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; InterPro IPR000067:IPR006182:IPR013556; KEGG: abu:Abu_1963 flagellar M-ring protein FliF; PFAM: Flagellar M-ring domain protein; secretory protein YscJ/FliF family protein; SPTR: A8EW62 Flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
YP_003656659.1	COGs: COG1815 Flagellar basal body protein; InterPro IPR019776:IPR006300:IPR001444; KEGG: abu:Abu_1964 flagellar basal body rod protein FlgB; PFAM: flagellar basal body rod protein; SPTR: A8EW63 Flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB
YP_003656660.1	COGs: COG4786 Flagellar basal body rod protein; InterPro IPR019776:IPR020013:IPR001444:IPR010930; KEGG: abu:Abu_1965 flagellar distal rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8EW64 Flagellar distal rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins
YP_003656661.1	InterPro IPR018247; KEGG: abu:Abu_1966 hypothetical protein; SPTR: A8EW65 Putative uncharacterized protein; PFAM: Chemotaxis phosphatase, CheZ
YP_003656662.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1967 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EW66 Chemotaxis protein CheY; PFAM: Response regulator receiver domain
YP_003656663.1	COGs: COG4786 Flagellar basal body rod protein; InterProIPR019776:IPR020013:IPR012834:IPR001444:IPR 010930; KEGG: abu:Abu_1968 flagellar distal rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8EW67 Flagellar distal rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria
YP_003656664.1	KEGG: abu:Abu_1969 hypothetical protein; SPTR: A8EW68 Putative uncharacterized protein
YP_003656665.1	KEGG: abu:Abu_1970 hypothetical protein; SPTR: A8EW69 Putative uncharacterized protein
YP_003656666.1	COGs: COG0806 RimM protein required for 16S rRNA processing; InterPro IPR011961:IPR002676:IPR007903; KEGG: abu:Abu_1971 16S rRNA processing protein; PFAM: RimM protein; PRC-barrel domain protein; SPTR: A8EW70 Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_003656667.1	COGs: COG1837 RNA-binding protein (contains KH domain); KEGG: abu:Abu_1972 hypothetical protein; SPTR: A8EW71 Putative uncharacterized protein; PFAM: KH domain
YP_003656668.1	COGs: COG0228 Ribosomal protein S16; InterPro IPR000307:IPR020592; KEGG: abu:Abu_1973 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: A8EW72 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_003656669.1	COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822:IPR004125:IPR000897:IPR004780:IPR 003593; KEGG: abu:Abu_1974 signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: A8EW73 Signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_003656670.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942:IPR020103:IPR006224:IPR006145; KEGG: abu:Abu_1975 ribosomal large subunit pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: A8EW74 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_003656671.1	COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: abu:Abu_1977 hypothetical protein; PFAM: protein of unknown function DUF164; SPTR: A8EW76 Putative uncharacterized protein; PFAM: Putative zinc ribbon domain
YP_003656672.1	COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: abu:Abu_1978 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: A8EW77 Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486
YP_003656673.1	COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR006194:IPR002310; KEGG: abu:Abu_1979 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: A8EW78 Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit
YP_003656674.1	COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: abu:Abu_1981 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: A8EW80 Phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_003656675.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR016196:IPR011701:IPR002123:IPR000873; KEGG: abu:Abu_0193 2-acyl-glycerophospho-ethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; SPTR: A8ER96 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase; PFAM: Acyltransferase; AMP-binding enzyme; Major Facilitator Superfamily; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003656676.1	COGs: COG2962 permease; InterPro IPR004626:IPR000620; KEGG: vfm:VFMJ11_0067 RarD protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: B5FFA0 RarD protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: EamA-like transporter family; Eukaryotic protein of unknown function (DUF914); TIGRFAM: rarD protein
YP_003656677.1	COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625:IPR005075; KEGG: sil:SPO0528 hypothetical protein; PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; SPTR: B9R113 PepSY-associated TM helix family; PFAM: PepSY-associated TM helix
YP_003656678.1	InterPro IPR012335:IPR012336:IPR005243; KEGG: nis:NIS_0028 redox-active disulfide protein 2; SPTR: C2A086 Small redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2
YP_003656679.1	COGs: COG2105 conserved hypothetical protein; InterPro IPR013024:IPR009288; KEGG: abu:Abu_0185 hypothetical protein; PFAM: AIG2 family protein; SPTR: A8ER88 Putative uncharacterized protein; PFAM: AIG2-like family
YP_003656680.1	KEGG: dma:DMR_07820 hypothetical membrane protein; SPTR: C4XJR8 Hypothetical membrane protein
YP_003656681.1	COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR012910:IPR000531:IPR010916:IPR010105; KEGG: ppf:Pput_2559 TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: A3VRU0 Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor
YP_003656682.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR016040:IPR013328:IPR008927:IPR006115; KEGG: tye:THEYE_A0982 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; PRIAM: 2-hydroxy-3-oxopropionate reductase; SPTR: B5YKP9 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_003656683.1	COGs: COG0021 Transketolase; InterProIPR015941:IPR009014:IPR020826:IPR005478:IPR 005474:IPR005475:IPR005476; KEGG: abu:Abu_0182 transketolase; PFAM: Transketolase domain protein; Transketolase central region; PRIAM: Formaldehyde transketolase; SPTR: A8ER85 Transketolase; TIGRFAM: transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_003656684.1	InterProIPR002035:IPR002126:IPR011049:IPR015919:IPR 001343; KEGG: sfr:Sfri_0436 putative outer membrane adhesin like proteiin; PFAM: von Willebrand factor type A; Cadherin; Hemolysin-type calcium-binding region; SMART: von Willebrand factor type A; Cadherin; SPTR: Q088L7 Putative outer membrane adhesin like proteiin
YP_003656685.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR005467:IPR003594:IPR004358; KEGG: abu:Abu_0362 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A8ERR3 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003656686.1	InterPro IPR011647; KEGG: ate:Athe_0718 KWG Leptospira repeat protein; PFAM: KWG Leptospira repeat protein; SPTR: B9MQ41 KWG Leptospira repeat protein
YP_003656687.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006144:IPR010129:IPR006143:IPR003997; KEGG: asa:ASA_1670 HlyD family secretion protein; PFAM: secretion protein HlyD family protein; SPTR: A4SLH9 Secretion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family
YP_003656688.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003439:IPR017940:IPR005074:IPR011527:IPR 017750:IPR003593; KEGG: ccv:CCV52592_0163 toxin secretion ATP-binding protein; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; SPTR: C3X6Z4 Toxin ABC transporter ATPase and permease; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; TIGRFAM: type I secretion system ATPase, LssB family
YP_003656689.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR007730; KEGG: drt:Dret_0562 type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; Sporulation domain protein; SPTR: C8WYU3 Type I secretion outer membrane protein, TolC family; PFAM: Outer membrane efflux protein
YP_003656690.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR011991:IPR011006:IPR016032:IPR 001867; KEGG: abu:Abu_1868 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1ZWY0 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656691.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: drt:Dret_0562 type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; SPTR: Q1ZUL1 Putative agglutination protein; PFAM: Outer membrane efflux protein
YP_003656692.1	COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: abu:Abu_1445 hypothetical protein; SPTR: A8EUS6 Conserved hypothetical integral membrane protein; PFAM: MMPL family
YP_003656693.1	COGs: COG2854 ABC-type transport system involved in resistance to organic solvents auxiliary component; InterPro IPR008869; KEGG: abu:Abu_1444 putative periplasmic protein; PFAM: toluene tolerance family protein; SPTR: A8EUS5 Putative periplasmic protein; PFAM: Toluene tolerance, Ttg2
YP_003656694.1	COGs: COG2853 Surface lipoprotein; InterPro IPR007428; KEGG: abu:Abu_1443 VacJ-like lipoprotein; PFAM: VacJ family lipoprotein; SPTR: A8EUS4 VacJ-like lipoprotein; PFAM: VacJ like lipoprotein
YP_003656695.1	COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR003869; KEGG: abu:Abu_0696 sugar epimerase/dehydratase; PFAM: polysaccharide biosynthesis protein CapD; SPTR: C1ZZP7 Predicted nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein
YP_003656696.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: abu:Abu_0694 glycosyltransferase; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: A8ESN5 Glycosyltransferase; PFAM: Glycosyl transferase family 4
YP_003656697.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: fnu:FN1694 UDP-N-acetyl-D-quinovosamine 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1ZZP4 Nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003656698.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pay:PAU_04339 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Q2C5V2 Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1
YP_003656699.1	COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR017932:IPR014729:IPR006426:IPR000583:IPR 001962; KEGG: abu:Abu_0678 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II; SPTR: A8ESL9 Asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_003656700.1	KEGG: par:Psyc_0669 hypothetical protein; SPTR: Q4FTY0 Putative uncharacterized protein
YP_003656701.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abu:Abu_0677 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A8ESL8 Glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_003656702.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003439:IPR017940:IPR011527:IPR017871:IPR 001140:IPR003593; KEGG: abu:Abu_0675 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: A8ESL6 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter transmembrane region; ABC transporter
YP_003656703.1	COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR017932:IPR014729:IPR006426:IPR000583:IPR 001962; KEGG: abu:Abu_0678 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: A6DEM6 Probable asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_003656704.1	InterPro IPR013217; KEGG: mgm:Mmc1_0495 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: A7BQK1 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase domain
YP_003656705.1	KEGG: cbs:COXBURSA331_A1113 hypothetical protein; SPTR: C6MR21 Putative uncharacterized protein
YP_003656706.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dth:DICTH_0815 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C6MR24 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_003656707.1	KEGG: cbh:CLC_2593 hypothetical protein; SPTR: Q0YTX7 Putative uncharacterized protein
YP_003656708.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: mag:amb0056 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B6BKH8 Nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003656709.1	InterPro IPR011051:IPR008894; KEGG: phe:Phep_0251 WxcM domain protein domain protein; PFAM: WxcM domain protein domain protein; SPTR: A7AB17 Putative uncharacterized protein; PFAM: WxcM-like, C-terminal
YP_003656710.1	KEGG: saq:Sare_2944 hypothetical protein; SPTR: Q2PC39 Putative uncharacterized protein rubN7
YP_003656711.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: cch:Cag_0671 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q0YTU0 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003656712.1	KEGG: mag:amb0050 hypothetical protein; SPTR: Q0YTT9 Putative uncharacterized protein
YP_003656713.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015422:IPR015424; KEGG: tsi:TSIB_2051 predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Thermoanaerobacter; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: C6A0B7 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Thermoanaerobacter; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003656714.1	InterPro IPR013630:IPR013217:IPR013691; KEGG: mag:amb0051 SAM-dependent methyltransferase; PFAM: C-methyltransferase; Methyltransferase domain protein; Methyltransferase type 12; SPTR: B6BKG8 SAM-dependent methyltransferase; PFAM: C-methyltransferase; Methyltransferase domain; Hypothetical methyltransferase
YP_003656715.1	COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR016040:IPR005888:IPR001509; KEGG: abu:Abu_1816 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1ZZN1 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_003656716.1	COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888:IPR014710:IPR011051; KEGG: drm:Dred_3037 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: B6BKG6 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase
YP_003656717.1	COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907:IPR005835; KEGG: cts:Ctha_2064 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: B3QV15 Glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form
YP_003656718.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: cbc:CbuK_0704 radical SAM superfamily protein; PFAM: Radical SAM domain protein; SPTR: C6MR25 Radical SAM domain protein
YP_003656719.1	COGs: COG1045 Serine acetyltransferase; InterPro IPR011004:IPR020019:IPR001451; KEGG: lip:LIB012 acetyltransferase; SPTR: Q1MNZ3 Acetyltransferases; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
YP_003656720.1	COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR017932:IPR014729:IPR006426:IPR000583:IPR 001962; KEGG: abu:Abu_0668 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: A8ESK9 Asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; Glutamine amidotransferases class-II; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_003656721.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015422:IPR015424; KEGG: abu:Abu_0667 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8ESK8 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003656722.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: abu:Abu_0666 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8ESK7 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family
YP_003656723.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015422:IPR015424; KEGG: abu:Abu_0664 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8ESK5 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003656724.1	COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR011004:IPR018357:IPR001451; KEGG: abu:Abu_0663 hypothetical protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: A8ESK4 Putative uncharacterized protein
YP_003656725.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: abu:Abu_0662 hypothetical protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: A8ESK3 Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_003656726.1	COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterProIPR016040:IPR014027:IPR008927:IPR017476:IPR 001732:IPR014026; KEGG: abu:Abu_0661 UDP-hexose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: A8ESK2 UDP-hexose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_003656727.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509:IPR008089; KEGG: abu:Abu_0660 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: A8ESK1 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family
YP_003656728.1	InterPro IPR012657; KEGG: fph:Fphi_1248 hypothetical protein; SPTR: B0TXL5 Putative uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436
YP_003656729.1	COGs: COG1004 UDP-glucose 6-dehydrogenase; InterProIPR016040:IPR014027:IPR008927:IPR017476:IPR 001732:IPR014026; KEGG: tdn:Suden_1968 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: Q30P39 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_003656730.1	InterPro IPR003856; KEGG: nam:NAMH_1653 chain length determinant protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: C1ZZP8 Chain length determinant protein; PFAM: Chain length determinant protein
YP_003656731.1	COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR016040:IPR005886:IPR001509; KEGG: saf:SULAZ_0910 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1DUU6 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_003656732.1	COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558:IPR004404:IPR000581; KEGG: abu:Abu_2100 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: A8EWJ4 Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_003656733.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterProIPR001478:IPR009003:IPR011782:IPR001254:IPR 001940; KEGG: abu:Abu_2099 periplasmic serine protease DO; heat shock protein HtrA; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: A8EWJ3 Periplasmic serine protease DO; heat shock protein HtrA; TIGRFAM: protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_003656734.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_2098 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EWJ2 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656735.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR003594:IPR009082:IPR 003661; KEGG: abu:Abu_2097 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: A8EWJ1 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003656736.1	COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: abu:Abu_1983 U32 family peptidase; PFAM: peptidase U32; SPTR: A8EW82 Peptidase, U32 family; PFAM: Peptidase family U32
YP_003656737.1	COGs: COG0497 ATPase involved in DNA repair; InterPro IPR017871:IPR003395; KEGG: abu:Abu_1985 DNA repair protein RecN; PFAM: SMC domain protein; SPTR: A8EW84 DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_003656738.1	COGs: COG0061 sugar kinase; InterPro IPR017437:IPR016064:IPR002504; KEGG: abu:Abu_1986 NAD(+) kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: A8EW85 NAD(+) kinase; PFAM: ATP-NAD kinase
YP_003656739.1	InterPro IPR006144:IPR010129:IPR006143:IPR003997; KEGG: vex:VEA_001011 ABC-type protease exporter membrane fusion protein (MFP) family component PrtE/AprE; PFAM: secretion protein HlyD family protein; SPTR: A6CWJ0 Secretion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family
YP_003656740.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003439:IPR017940:IPR005074:IPR011527:IPR 017750:IPR001140:IPR003593; KEGG: mmw:Mmwyl1_2824 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase; SPTR: A3Y7L5 Putative toxin secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ATPase, LssB family
YP_003656741.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ppr:PBPRB0583 putative agglutination protein; PFAM: outer membrane efflux protein; SPTR: Q1ZUL1 Putative agglutination protein; PFAM: Outer membrane efflux protein
YP_003656742.1	COGs: COG0480 Translation elongation factors (GTPase); InterProIPR014721:IPR000640:IPR020568:IPR009000:IPR 009022:IPR000795:IPR004540:IPR005225:IPR004161:IPR005517; KEGG: abu:Abu_1987 translational elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; SPTR: A8EW86 Elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_003656743.1	COGs: COG0049 Ribosomal protein S7; InterPro IPR000235:IPR005717; KEGG: abu:Abu_1988 30S ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: A8EW87 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_003656744.1	COGs: COG0048 Ribosomal protein S12; InterPro IPR006032:IPR012340:IPR016027:IPR005679; KEGG: abu:Abu_1989 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: A8EW88 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_003656745.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR004010; KEGG: abu:Abu_1749 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8EVM3 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003656746.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: abu:Abu_1991 putative transport protein AraJ; PFAM: major facilitator superfamily MFS_1; SPTR: A8EW90 Putative transport protein AraJ; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein
YP_003656747.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: abu:Abu_1990 alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: A8EW89 Alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold
YP_003656748.1	KEGG: rlt:Rleg2_5769 filamentous haemagglutinin family outer membrane protein; SPTR: B5JIN5 Putative uncharacterized protein
YP_003656749.1	InterPro IPR019410; KEGG: dat:HRM2_03590 putative 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase-16, putative; SPTR: Q0F3H3 Putative uncharacterized protein; PFAM: Putative methyltransferase
YP_003656750.1	InterPro IPR004256; KEGG: abu:Abu_1277 hypothetical protein; PFAM: DUF234 DEXX-box ATPase; SPTR: A8EUB0 Putative uncharacterized protein; PFAM: Archaea bacterial proteins of unknown function
YP_003656751.1	InterPro IPR005135; KEGG: abu:Abu_0412 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: A8ERW3 Putative uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_003656752.1	COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: ctc:CTC02186 homoserine/homoserine lactone efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Q892B9 Homoserine/homoserine lactone efflux protein; PFAM: LysE type translocator
YP_003656753.1	COGs: COG1671 conserved hypothetical protein; InterPro IPR003791; KEGG: tdn:Suden_0449 hypothetical protein; PFAM: protein of unknown function DUF188; SPTR: B6BJ97 Putative uncharacterized protein; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671
YP_003656754.1	COGs: COG4895 conserved hypothetical protein; InterPro IPR019240; KEGG: abu:Abu_0583 hypothetical protein; PFAM: Protein of unknown function DUF2196; SPTR: A8ESC6 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2196)
YP_003656755.1	KEGG: swp:swp_3852 hypothetical protein; SPTR: B8CQR3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3147)
YP_003656756.1	InterPro IPR006342; KEGG: cko:CKO_01019 hypothetical protein; SPTR: B6BJX9 Probable methyltransferase, putative; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family
YP_003656757.1	COGs: COG0320 Lipoate synthase; InterPro IPR013785:IPR003698:IPR007197:IPR006638; KEGG: abu:Abu_1470 lipoyl synthase; PFAM: Radical SAM domain protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EUV1 Lipoic acid synthetase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_003656758.1	COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: abu:Abu_1471 biotin/lipoate A/B protein ligase family protein; PFAM: biotin/lipoate A/B protein ligase; SPTR: A8EUV2 Biotin/lipoate A/B protein ligase family protein; PFAM: Biotin/lipoate A/B protein ligase family
YP_003656759.1	COGs: COG2609 Pyruvate dehydrogenase complex dehydrogenase (E1) component; InterPro IPR004660:IPR015941:IPR009014:IPR005474; KEGG: abu:Abu_1472 pyruvate dehydrogenase subunit E1; PFAM: Transketolase domain protein; SPTR: A8EUV3 Pyruvate dehydrogenase E1 component; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type
YP_003656760.1	COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterProIPR000089:IPR004167:IPR011053:IPR003016:IPR 006256:IPR001078; KEGG: abu:Abu_1473 dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; PRIAM: Dihydrolipoyllysine-residue acetyltransferase; SPTR: A8EUV4 Dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
YP_003656761.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR000089:IPR004099:IPR016156:IPR011053:IPR 012999:IPR003016:IPR006258:IPR013027:IPR000815; KEGG: abu:Abu_1474 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; biotin/lipoyl attachment domain-containing protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: A8EUV5 Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase
YP_003656762.1	KEGG: msy:MS53_0073 hypothetical protein; SPTR: C4XFE6 Putative uncharacterized protein
YP_003656763.1	InterPro IPR013831:IPR013830:IPR001087; KEGG: abu:Abu_2183 lipolytic protein; PFAM: lipolytic protein G-D-S-L family; SPTR: A8EWS4 Lipolytic enzyme, GDSL domain; PFAM: GDSL-like Lipase/Acylhydrolase
YP_003656764.1	COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: abu:Abu_0938 cobalt ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ETC4 Cobalt ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter
YP_003656765.1	InterPro IPR003339; KEGG: abu:Abu_0937 cobalt ABC transporter, permease protein, putative; PFAM: cobalt transport protein; SPTR: A8ETC3 Cobalt ABC transporter, permease protein, putative; PFAM: Cobalt transport protein
YP_003656766.1	KEGG: abu:Abu_0936 hypothetical protein; SPTR: A8ETC2 Putative uncharacterized protein
YP_003656767.1	COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: abu:Abu_0935 cobalamin (vitamin B12) biosynthesis protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: A8ETC1 Cobalamin (Vitamin B12) biosynthesis protein; PFAM: Cobalt uptake substrate-specific transmembrane region
YP_003656768.1	COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: abu:Abu_0934 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: A8ETC0 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region
YP_003656769.1	COGs: COG2350 conserved hypothetical protein; InterPro IPR011008:IPR005545; KEGG: abu:Abu_1881 hypothetical protein; PFAM: YCII-related; SPTR: A8EVZ1 Putative uncharacterized protein; PFAM: YCII-related domain
YP_003656770.1	KEGG: abu:Abu_1882 hypothetical protein; SPTR: A8EVZ2 Putative uncharacterized protein
YP_003656771.1	COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterProIPR007080:IPR000722:IPR012754:IPR007066:IPR 007083:IPR007081:IPR006592; KEGG: abu:Abu_1883 DNA-directed RNA polymerase, beta' chain; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: A8EVZ3 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_003656772.1	COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR007121:IPR010243:IPR007644:IPR007642:IPR 007645:IPR019462:IPR007120:IPR007641; KEGG: abu:Abu_1884 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; PRIAM: DNA-directed RNA polymerase; SPTR: A8EVZ4 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_003656773.1	COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR013823:IPR014719:IPR008932:IPR000206; KEGG: abu:Abu_1885 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: A8EVZ5 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_003656774.1	COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: abu:Abu_1886 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: A8EVZ6 50S ribosomal protein L10; PFAM: Ribosomal protein L10
YP_003656775.1	COGs: COG0081 Ribosomal protein L1; InterPro IPR002143:IPR016094:IPR005878; KEGG: abu:Abu_1887 50S ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: A8EVZ7 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_003656776.1	COGs: COG0080 Ribosomal protein L11; InterProIPR020784:IPR020783:IPR020785:IPR006519:IPR 000911; KEGG: abu:Abu_1888 50S ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: A8EVZ8 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_003656777.1	COGs: COG0250 Transcription antiterminator; InterPro IPR006645:IPR008991:IPR015869:IPR001062; KEGG: abu:Abu_1889 transcription antitermination protein NusG; PFAM: NGN domain protein; SMART: NGN domain protein; SPTR: A8EVZ9 Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG
YP_003656778.1	InterPro IPR005807; KEGG: abu:Abu_1890 preprotein translocase subunit SecE; SPTR: A8EW00 Preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_003656779.1	InterPro IPR018264:IPR001705; KEGG: abu:Abu_1892 50S ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: A8EW01 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_003656780.1	COGs: COG0050 GTPase - translation elongation factors; InterProIPR009001:IPR009000:IPR000795:IPR004541:IPR 005225:IPR004161:IPR004160; KEGG: abu:Abu_1893 elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: A8EW02 Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_003656781.1	COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013221:IPR004101:IPR018109:IPR005762; KEGG: abu:Abu_1898 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: A8EW03 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_003656782.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480:IPR003524:IPR018481; KEGG: abu:Abu_1899 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; PRIAM:Phospho-N-acetylmuramoyl-pentapeptide-transfe rase; SPTR: A8EW04 Phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-trans ferase; PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_003656783.1	COGs: COG0696 Phosphoglyceromutase; InterProIPR005995:IPR017849:IPR011258:IPR017850:IPR 006124; KEGG: abu:Abu_1900 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; SPTR: A8EW05 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
YP_003656784.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: abu:Abu_1901 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8EW06 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003656785.1	COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR011816:IPR001264:IPR001460; KEGG: abu:Abu_1902 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: A8EW07 Penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family
YP_003656786.1	COGs: COG0174 Glutamine synthetase; InterPro IPR014746:IPR008147:IPR008146:IPR004809; KEGG: abu:Abu_1903 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: A8EW08 Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_003656787.1	COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR016195:IPR010140:IPR004013; KEGG: abu:Abu_1904 histidinol-phosphate phosphatase; PFAM: PHP domain protein; SPTR: A8EW09 Histidinol-phosphate phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family
YP_003656788.1	COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: abu:Abu_1905 molybdopterin converting factor, subunit 2; PFAM: molybdopterin biosynthesis MoaE protein; SPTR: A8EW10 Molybdopterin converting factor, subunit 2; PFAM: MoaE protein
YP_003656789.1	InterPro IPR016155:IPR003749; KEGG: abu:Abu_1906 molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; SPTR: A8EW11 Molybdopterin converting factor, subunit 1; PFAM: ThiS family
YP_003656790.1	COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: abu:Abu_1907 hypothetical protein; PFAM: protein of unknown function DUF178; SPTR: A8EW12 Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)
YP_003656791.1	COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: abu:Abu_1908 undecaprenyl diphosphatase, putative; PFAM: Bacitracin resistance protein BacA; PRIAM: Undecaprenyl-diphosphatase; SPTR: B6BHN0 Undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_003656792.1	COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR004276:IPR007235; KEGG: abu:Abu_1909 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: A8EW14 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_003656793.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR018365:IPR001182; KEGG: abu:Abu_1910 penicillin-binding protein; PFAM: cell cycle protein; SPTR: A8EW15 Penicillin-binding protein; PFAM: Cell cycle protein
YP_003656794.1	COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR001460; KEGG: abu:Abu_1911 cell division protein FtsW; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: A8EW16 Cell division protein FtsW; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_003656795.1	COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR015891; KEGG: abu:Abu_1912 peptidyl-prolyl cis-trans isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; SPTR: A8EW17 Peptidyl-prolyl cis-trans isomerase; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_003656796.1	KEGG: tdn:Suden_0150 hypothetical protein; SPTR: Q30UA0 Putative uncharacterized protein
YP_003656797.1	KEGG: dze:Dd1591_3146 transcriptional antiterminator, Rof; SPTR: B6XDL6 Putative uncharacterized protein
YP_003656798.1	KEGG: abu:Abu_2002 hypothetical protein; SPTR: A8EW96 Putative uncharacterized protein
YP_003656799.1	KEGG: abu:Abu_2003 hypothetical protein; SPTR: A8EW97 Conserved hypothetical membrane protein
YP_003656800.1	COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterProIPR017926:IPR006221:IPR000991:IPR006220:IPR 011702:IPR001317; KEGG: abu:Abu_2004 anthranilate synthase component II; PFAM: glutamine amidotransferase class-I; SPTR: A8EW98 Anthranilate synthase, component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_003656801.1	COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: drm:Dred_1529 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Q1VSK1 Ferric iron uptake ABC transporter (FeT) family, substrate binding protein; PFAM: Bacterial extracellular solute-binding protein
YP_003656802.1	COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: pat:Patl_1597 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0N6P3 ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003656803.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR017871:IPR003593; KEGG: mae:Maeo_0335 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6UTV1 ABC transporter related; PFAM: ABC transporter
YP_003656804.1	InterPro IPR014966; KEGG: ckr:CKR_0031 hypothetical protein; PFAM: FRG domain protein; SPTR: C9QK67 Putative uncharacterized protein; PFAM: FRG domain
YP_003656805.1	COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: abu:Abu_0317 carboxylyase-related protein; PFAM: Carboxylyase-related protein; SPTR: A8ERL8 Carboxylyase-related protein; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases
YP_003656806.1	COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; InterPro IPR015421:IPR015424:IPR004839; KEGG: abu:Abu_0316 aminotransferase/L-cysteine desulfhydrase; PFAM: aminotransferase class I and II; SPTR: A8ERL7 Aminotransferase/L-cysteine desulfhydrase; PFAM: Aminotransferase class I and II
YP_003656807.1	COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: abu:Abu_0315 NADH-quinone oxidoreductase, A subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: A8ERL6 NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_003656808.1	COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006138:IPR006137; KEGG: abu:Abu_0314 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERL5 NADH-quinone oxidoreductase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_003656809.1	COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR001268:IPR001135; KEGG: abu:Abu_0313 NADH-quinone oxidoreductase, C/D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: A8ERL4 NADH-quinone oxidoreductase subunit C/D; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit
YP_003656810.1	COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336; KEGG: abu:Abu_0312 NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERL3 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit
YP_003656811.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR001949:IPR011538:IPR019554:IPR019575; KEGG: abu:Abu_0311 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERL2 NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_003656812.1	COGs: COG0372 Citrate synthase; InterProIPR016142:IPR016141:IPR019810:IPR010953:IPR 002020; KEGG: abu:Abu_0310 citrate synthase; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: A8ERL1 Citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type)
YP_003656813.1	COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR017896:IPR000283:IPR019574; KEGG: abu:Abu_0309 NADH-quinone oxidoreductase, G subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; SPTR: A8ERL0 NADH-quinone oxidoreductase, G subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
YP_003656814.1	COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086:IPR001694; KEGG: abu:Abu_0308 NADH-quinone oxidoreductase, H subunit; PFAM: respiratory-chain NADH dehydrogenase subunit 1; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERK9 NADH-quinone oxidoreductase, H subunit; PFAM: NADH dehydrogenase
YP_003656815.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017896:IPR009051:IPR017900:IPR001450; KEGG: abu:Abu_0307 NADH-quinone oxidoreductase, I subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ERK8 NADH-quinone oxidoreductase, I subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_003656816.1	COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: abu:Abu_0306 NADH-quinone oxidoreductase, J subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: A8ERK7 NADH-quinone oxidoreductase, J subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_003656817.1	COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: abu:Abu_0305 NADH-quinone oxidoreductase, K subunit; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: A8ERK6 NADH-quinone oxidoreductase, K subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_003656818.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003945:IPR001516:IPR001750:IPR003916:IPR 018393; KEGG: abu:Abu_0304 NADH-quinone oxidoreductase, L subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: A8ERK5 NADH-quinone oxidoreductase, L subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_003656819.1	COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227:IPR001750:IPR003918; KEGG: abu:Abu_0303 NADH-quinone oxidoreductase, M subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A8ERK4 NADH-quinone oxidoreductase, M subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_003656820.1	COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096:IPR001750; KEGG: abu:Abu_0302 NADH-quinone oxidoreductase, N subunit; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: A8ERK3 NADH-quinone oxidoreductase, N subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_003656821.1	InterPro IPR004224:IPR018956; KEGG: abu:Abu_0301 fumarate reductase cytochrome b-556 subunit; PFAM: Fumarate reductase respiratory complex; SPTR: A8ERK2 Fumarate reductase, cytochrome b subunit; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit
YP_003656822.1	COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR015939:IPR003952:IPR014006:IPR003953:IPR 004112; KEGG: abu:Abu_0300 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase; SPTR: A8ERK1 Fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_003656823.1	COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041:IPR017896:IPR012675:IPR012285:IPR 009051:IPR006058:IPR017900:IPR004489; KEGG: abu:Abu_0299 fumarate reductase iron-sulfur subunit; SPTR: A8ERK0 Fumarate reductase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_003656824.1	InterPro IPR001401; KEGG: abu:Abu_0298 ATP/GTP-binding protein; PFAM: Dynamin family protein; SPTR: A8ERJ9 Putative uncharacterized protein; PFAM: Dynamin family
YP_003656825.1	InterPro IPR001401; KEGG: abu:Abu_0297 ATP/GTP-binding protein; PFAM: Dynamin family protein; SPTR: A8ERJ8 Putative uncharacterized protein; PFAM: Dynamin family
YP_003656826.1	KEGG: tdn:Suden_1949 hypothetical protein; SPTR: Q30P58 Putative uncharacterized protein
YP_003656827.1	InterPro IPR015927:IPR019759; KEGG: vfi:VF_B0018 DNA-binding protein RdgA; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: B6BNE8 Putative repressor; PFAM: Peptidase S24-like
YP_003656828.1	KEGG: abu:Abu_0718 hypothetical protein; SPTR: A8ESQ9 Putative uncharacterized protein
YP_003656829.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: abu:Abu_0717 ferric uptake regulation protein; PFAM: ferric-uptake regulator; SPTR: A8ESQ8 Ferric uptake regulation protein; PFAM: Ferric uptake regulator family
YP_003656830.1	KEGG: abu:Abu_0716 hypothetical protein; SPTR: A8ESQ7 Putative uncharacterized protein
YP_003656831.1	InterPro IPR009078; KEGG: abu:Abu_0715 hypothetical protein; SPTR: A8ESQ6 Putative uncharacterized protein; PFAM: Uncharacterized protein domain (DUF2202)
YP_003656832.1	KEGG: abu:Abu_0714 hypothetical protein; SPTR: A8ESQ5 Putative uncharacterized protein
YP_003656833.1	KEGG: abu:Abu_0713 hypothetical protein; SPTR: A8ESQ4 Putative uncharacterized protein
YP_003656834.1	KEGG: abu:Abu_0712 hypothetical protein; SPTR: A8ESQ3 Putative uncharacterized protein
YP_003656835.1	COGs: COG2217 Cation transport ATPase; InterProIPR018303:IPR000150:IPR006416:IPR001757:IPR 008250:IPR005834:IPR000695; KEGG: abu:Abu_0711 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: A8ESQ2 Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_003656837.1	KEGG: wsu:WS1569 hypothetical protein; SPTR: Q7MR91 Putative uncharacterized protein
YP_003656838.1	KEGG: fjo:Fjoh_4011 PAS/PAC sensor signal transduction histidine kinase; SPTR: B6FZV5 Putative uncharacterized protein
YP_003656839.1	COGs: COG0716 Flavodoxins; InterPro IPR008254:IPR001226:IPR010086:IPR001094; KEGG: abu:Abu_1769 flavodoxin; PFAM: flavodoxin/nitric oxide synthase; SPTR: A8EVP2 Flavodoxin; TIGRFAM: flavodoxin; PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain
YP_003656840.1	KEGG: cjd:JJD26997_0267 hypothetical protein; SPTR: Q4HHK3 Putative uncharacterized protein
YP_003656841.1	COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterProIPR013816:IPR016102:IPR017866:IPR005809:IPR 013650:IPR005811; KEGG: lpn:lpg0534 succinyl CoA synthetase beta chain; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Q5ZY39 Succinyl CoA synthetase beta chain; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_003656842.1	COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterProIPR005810:IPR016040:IPR016102:IPR017440:IPR 003781:IPR005811; KEGG: kko:Kkor_1538 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; SPTR: A4BDN2 Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_003656843.1	COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: sun:SUN_0232 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: A6Q6T3 Phytanoyl-CoA dioxygenase, PhyH family; PFAM: Phytanoyl-CoA dioxygenase (PhyH)
YP_003656844.1	COGs: COG2183 Transcriptional accessory protein; InterProIPR003029:IPR012340:IPR016027:IPR018974:IPR 006641; KEGG: abu:Abu_2017 S1 RNA-binding domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: A8EWB1 S1 RNA binding domain protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain
YP_003656845.1	COGs: COG3384 conserved hypothetical protein; InterPro IPR014436:IPR004183:IPR006311; KEGG: chu:CHU_3641 hypothetical protein; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: Q11NY9 Putative uncharacterized protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase
YP_003656846.1	COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: rbi:RB2501_15054 4-hydroxybenzoyl-CoA thioesterase domain protein; PFAM: thioesterase superfamily protein; SPTR: A4CLA8 4-hydroxybenzoyl-CoA thioesterase domain protein; PFAM: Thioesterase superfamily
YP_003656847.1	InterPro IPR001296; KEGG: dtu:Dtur_0584 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B6BN14 Putative uncharacterized protein; PFAM: Glycosyl transferases group 1
YP_003656848.1	COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR011991:IPR005119; KEGG: abu:Abu_0849 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A8ET35 Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003656849.1	InterPro IPR016196:IPR011701; KEGG: abu:Abu_0016 putative MFS permease; PFAM: major facilitator superfamily MFS_1; SPTR: A8EQU5 Putative uncharacterized protein; PFAM: Major Facilitator Superfamily
YP_003656850.1	COGs: COG1942 Uncharacterized protein 4-oxalocrotonate tautomerase homolog; InterPro IPR018191:IPR004370; KEGG: abu:Abu_0848 tautomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: A8ET34 Probable tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme
YP_003656851.1	COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007065; KEGG: abu:Abu_0269 hypothetical protein; PFAM: HPP family protein; SPTR: A8ERH0 Conserved hypothetical membrane protein, HPP family; PFAM: HPP family
YP_003656852.1	COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796:IPR012259; KEGG: phe:Phep_1421 dihydrofolate reductase; PFAM: dihydrofolate reductase region; SPTR: C4BVC8 Dihydrofolate reductase; PFAM: Dihydrofolate reductase
YP_003656853.1	COGs: COG0207 Thymidylate synthase; InterPro IPR000398; KEGG: psa:PST_0414 thymidylate synthase; PFAM: thymidylate synthase; PRIAM: Thymidylate synthase; SPTR: C6P461 Thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase
YP_003656854.1	COGs: COG1279 Lysine efflux permease; InterPro IPR001123; KEGG: asu:Asuc_0217 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: C9PP62 LysE family transporter; PFAM: LysE type translocator
YP_003656855.1	COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: nam:NAMH_0417 hypothetical protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: C1ZYU9 Putative uncharacterized protein; PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427
YP_003656856.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: wsu:WS0280 ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1ZYL8 Amino acid ABC transporter membrane protein, PAAT family; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003656857.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638:IPR001320; KEGG: nam:NAMH_0584 binding component of abc transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: C1ZYL7 Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003656858.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: nam:NAMH_0585 amino acid permease ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9L8P3 Amino acid permease ATP-binding protein; PFAM: ABC transporter
YP_003656859.1	InterPro IPR000620; KEGG: wsu:WS0276 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Q7MSN2 Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_003656860.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120:IPR014085; KEGG: pin:Ping_2417 amidase; PFAM: Amidase; SPTR: A1SXD4 Amidase; TIGRFAM: allophanate hydrolase; PFAM: Amidase; TIGRFAM: allophanate hydrolase
YP_003656861.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR006311:IPR000914; KEGG: pin:Ping_2418 ABC transporter extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: A1SXD5 ABC transporter extracellular solute-binding protein, family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003656862.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: rpb:RPB_4050 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B7RGM5 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003656863.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: rpb:RPB_4051 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B4WGC7 ABC transporter, permease protein, putative; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003656864.1	COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR017871:IPR013563:IPR003593; KEGG: azc:AZC_1514 ABC transporter related protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: A8HXL2 ABC transporter related protein; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK
YP_003656865.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR009081:IPR001789:IPR011006; KEGG: abu:Abu_1762 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EVN5 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656866.1	COGs: COG3614 periplasmic ligand-binding sensor domain; InterPro IPR005467:IPR006189:IPR003594:IPR004358; KEGG: swd:Swoo_0798 diguanylate cyclase; PFAM: ATP-binding region ATPase domain protein; CHASE domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A9D0K7 Sensory transduction system, regulatory protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CHASE domain
YP_003656867.1	COGs: COG0514 Superfamily II DNA helicase; InterProIPR002121:IPR014021:IPR001650:IPR010997:IPR 006293:IPR018329:IPR011545:IPR018982:IPR014001; KEGG: sun:SUN_2266 ATP-dependent DNA helicase RecQ; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; SPTR: B6BJR4 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family
YP_003656868.1	COGs: COG4106 Trans-aconitate methyltransferase; InterPro IPR013216; KEGG: mmw:Mmwyl1_2522 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: A6VYB2 Methyltransferase type 11; PFAM: Methyltransferase domain
YP_003656869.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: lsp:Bsph_1996 response regulator receiver domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Q2BIA8 Diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003656870.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: cpi:Cpin_4080 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: C7PE40 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase
YP_003656871.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abu:Abu_1057 hypothetical protein; PFAM: helix-turn-helix HxlR type; SPTR: A8ETP3 Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix
YP_003656872.1	COGs: COG3449 DNA gyrase inhibitor; InterProIPR018060:IPR012287:IPR011256:IPR009057:IPR 000005:IPR010499:IPR020449; KEGG: gur:Gura_3503 transcription activator, effector binding; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A5G790 Transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003656873.1	COGs: COG0385 Na+-dependent transporter; InterPro IPR004684:IPR002657; KEGG: wsu:WS0141 putative Na+-dependent transporter; PFAM: Bile acid:sodium symporter; SPTR: C2A1V5 Predicted Na+-dependent transporter; PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter
YP_003656874.1	COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: wsu:WS0141 putative Na+-dependent transporter; PFAM: Bile acid:sodium symporter; SPTR: C2A1V5 Predicted Na+-dependent transporter; PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter
YP_003656875.1	COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR017945:IPR000422; KEGG: abu:Abu_1131 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; SPTR: C1ZY53 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_003656876.1	COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868:IPR003006; KEGG: bcg:BCG9842_B0018 isochorismatase family protein; PFAM: isochorismatase hydrolase; SPTR: C2YYT7 Isochorismatase; PFAM: Isochorismatase family
YP_003656877.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006139:IPR006140; KEGG: abu:Abu_0274 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: A8ERH5 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_003656878.1	InterPro IPR000620; KEGG: cps:CPS_4003 membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Q47X10 Membrane protein; PFAM: EamA-like transporter family
YP_003656879.1	InterPro IPR000620; KEGG: cps:CPS_4003 membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Q47X10 Membrane protein; PFAM: EamA-like transporter family
YP_003656880.1	COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: abu:Abu_1145 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A8ETY1 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003656881.1	KEGG: abu:Abu_0275 hypothetical protein; SPTR: A8ERH6 Putative uncharacterized protein
YP_003656882.1	COGs: COG2513 PEP phosphonomutase; InterPro IPR018523:IPR012695:IPR015813:IPR000918; KEGG: abu:Abu_0276 2-methylisocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: A8ERH7 Carboxyphosphoenolpyruvate phosphomutase PrpB; TIGRFAM: methylisocitrate lyase; PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase
YP_003656883.1	COGs: COG0372 Citrate synthase; InterProIPR019810:IPR011278:IPR002020:IPR016142:IPR 016141; KEGG: abu:Abu_0277 methylcitrate synthase; PFAM: Citrate synthase; PRIAM: 2-methylcitrate synthase; SPTR: A8ERH8 2-methylcitrate synthase/citrate synthase 2; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II
YP_003656884.1	COGs: COG1048 Aconitase A; InterProIPR012708:IPR001030:IPR015931:IPR015932:IPR 015928:IPR000573; KEGG: abu:Abu_0278 aconitate hydratase; PFAM: aconitate hydratase domain protein; SPTR: A8ERH9 Aconitate hydratase 1; TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; aconitate hydratase 1
YP_003656885.1	COGs: COG2828 conserved hypothetical protein; InterPro IPR012709:IPR007400; KEGG: abu:Abu_0279 hypothetical protein; PFAM: protein of unknown function DUF453; SPTR: A8ERI0 Putative uncharacterized protein; TIGRFAM: AcnD-accessory protein PrpF; PFAM: PrpF protein; TIGRFAM: probable AcnD-accessory protein PrpF
YP_003656886.1	COGs: COG0692 Uracil DNA glycosylase; InterPro IPR018085:IPR002043:IPR005122; KEGG: abu:Abu_2147 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: A8EWN8 Uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase
YP_003656887.1	InterPro IPR000868; KEGG: abu:Abu_0281 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: A8ERI2 Isochorismatase hydrolase; PFAM: Isochorismatase family
YP_003656888.1	COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: abu:Abu_0283 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; PRIAM: Hydroxymethylbilane synthase; SPTR: A8ERI4 Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_003656889.1	COGs: COG1651 Protein-disulfide isomerase; InterProIPR011767:IPR012335:IPR012336:IPR017936:IPR 001853; KEGG: abu:Abu_0284 putative DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: A8ERI5 Putative uncharacterized protein; PFAM: DSBA-like thioredoxin domain
YP_003656890.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR012763:IPR003593:IPR003959; KEGG: abu:Abu_0285 DNA polymerase III, gamma and tau subunits; PFAM: AAA ATPase central domain protein; PRIAM: DNA-directed DNA polymerase; SMART: AAA ATPase; SPTR: A8ERI6 DNA polymerase III, gamma and tau subunits; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, subunits gamma and tau
YP_003656891.1	COGs: COG0796 Glutamate racemase; InterPro IPR018187:IPR004391:IPR001920:IPR015942; KEGG: abu:Abu_0286 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: A8ERI7 Glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_003656892.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR004358:IPR003594:IPR009082:IPR 005467:IPR003661:IPR013655; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: A8EV12 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003656893.1	COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004872; KEGG: cby:CLM_1246 lipoprotein, NlpA family; PFAM: NLPA lipoprotein; SPTR: C1FK41 Lipoprotein, NLPA family; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_003656894.1	COGs: COG2011 ABC-type metal ion transport system permease component; InterPro IPR000515; KEGG: wsu:WS1944 ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q7M815 ABC TRANSPORTER PERMEASE COMPONENT; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003656895.1	COGs: COG1135 ABC-type metal ion transport system ATPase component; InterProIPR017871:IPR003439:IPR017908:IPR003593:IPR 018449; KEGG: cco:CCC13826_1250 methionine import ATP-binding protein MetN; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; SPTR: C6RFD9 Methionine import ATP-binding protein MetN; PFAM: ABC transporter; NIL domain
YP_003656896.1	InterPro IPR005122; KEGG: gfo:GFO_2677 hypothetical protein; SPTR: A9E1L4 Putative uncharacterized protein
YP_003656897.1	KEGG: hor:Hore_09190 ATP-cone domain protein; SPTR: B8CWK6 Transcriptional repressor nrdR
YP_003656898.1	COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR018228:IPR014021:IPR001650:IPR014001:IPR 006935; KEGG: sbm:Shew185_0360 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A3HSL7 Helicase; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427)
YP_003656899.1	KEGG: similar to AGAP005608-PA
YP_003656900.1	COGs: COG1158 Transcription termination factor; InterProIPR004665:IPR016027:IPR011112:IPR011129:IPR 003593:IPR011113:IPR000194; KEGG: abu:Abu_0288 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: Cold shock protein; AAA ATPase; SPTR: A8ERI9 Transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_003656901.1	COGs: COG0450 Peroxiredoxin; InterProIPR012335:IPR012336:IPR017936:IPR000866:IPR 019479; KEGG: abu:Abu_1879 alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; SPTR: A8ERJ0 Alkyl hydroperoxide reductase/ Thiol specific antioxidant; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family
YP_003656902.1	InterPro IPR017900:IPR017896:IPR001450; KEGG: abu:Abu_0290 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ERJ1 Ferredoxin
YP_003656903.1	COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: abu:Abu_0291 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: A8ERJ2 Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase
YP_003656904.1	KEGG: abu:Abu_0292 hypothetical protein; SPTR: A8ERJ3 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399
YP_003656905.1	InterPro IPR002677; KEGG: abu:Abu_0293 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: A8ERJ4 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_003656906.1	COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR012281:IPR003664; KEGG: abu:Abu_0294 putative glycerol-3-phosphate acyltransferase PlsX; PFAM: fatty acid synthesis plsX protein; SPTR: A8ERJ5 Fatty acid/phospholipid synthesis protein plsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_003656907.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterProIPR004655:IPR016038:IPR016039:IPR013751:IPR 013747; KEGG: abu:Abu_0295 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: A8ERJ6 3-oxoacyl-[acyl-carrier-protein] synthase 3; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_003656908.1	KEGG: abu:Abu_0296 hypothetical protein; SPTR: A8ERJ7 Putative uncharacterized protein
YP_003656909.1	COGs: COG3672 periplasmic protein; InterPro IPR018120; KEGG: abu:Abu_2198 hypothetical protein; SPTR: A8EWT9 Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF920)
YP_003656910.1	KEGG: cju:C8J_0062 hypothetical protein; SPTR: A3IB47 Putative uncharacterized protein; PFAM: Prokaryotic glutathione synthetase, ATP-grasp domain
YP_003656911.1	InterPro IPR001544; KEGG: abu:Abu_0265 hypothetical protein; SPTR: A8ERG6 Putative uncharacterized protein; PFAM: Aminotransferase class IV
YP_003656912.1	COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterProIPR000014:IPR004358:IPR003594:IPR009082:IPR 005467:IPR000700:IPR013767; KEGG: abu:Abu_0035 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: C2A390 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box
YP_003656913.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011991:IPR011006:IPR001789:IPR001867; KEGG: wsu:WS0657 two component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C2A391 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656914.1	COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999:IPR005801:IPR015890; KEGG: abu:Abu_0262 para-aminobenzoate synthase component I; PFAM: Chorismate binding-like; SPTR: A8ERG3 Para-aminobenzoate synthase, glutamine amidotransferase component I; PFAM: chorismate binding enzyme
YP_003656915.1	COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006130:IPR002082:IPR006132:IPR006131; KEGG: abu:Abu_0261 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: A8ERG2 Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_003656916.1	InterPro IPR010706; KEGG: abu:Abu_0260 fatty acid cis/trans isomerase; PFAM: fatty acid cistrans isomerase; SPTR: A8ERG1 Fatty acid cis/trans isomerase; PFAM: Fatty acid cis/trans isomerase (CTI)
YP_003656917.1	COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814:IPR015421:IPR015424; KEGG: abu:Abu_0259 acetylornithine aminotransferase; PFAM: aminotransferase class-III; SPTR: A8ERG0 N-acetylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases
YP_003656918.1	KEGG: tdn:Suden_1253 hypothetical protein; SPTR: Q30R50 Putative uncharacterized protein; PFAM: Outer membrane efflux protein
YP_003656919.1	InterProIPR011990:IPR019734:IPR013026:IPR006597:IPR 001440; KEGG: aas:Aasi_0892 hypothetical protein; PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide repeat; SPTR: B3ESQ7 Putative uncharacterized protein; PFAM: Sel1 repeat; Tetratricopeptide repeat
YP_003656920.1	KEGG: hypothetical protein; SPTR: Q8I5Y2 Conserved Plasmodium protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003656921.1	COGs: COG0469 Pyruvate kinase; InterProIPR001697:IPR015793:IPR015813:IPR015794:IPR 015795:IPR011037; KEGG: abu:Abu_0258 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: A8ERF9 Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_003656922.1	KEGG: shm:Shewmr7_2228 hypothetical protein; SPTR: Q0HUI9 Putative uncharacterized protein
YP_003656923.1	COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR011031:IPR005126; KEGG: cco:CCC13826_1831 NapC/NirT cytochrome c family, N-region; PFAM: NapC/NirT cytochrome c domain protein; SPTR: C2A1Q1 Nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region
YP_003656924.1	InterPro IPR012286:IPR011031; KEGG: cco:CCC13826_1830 flavocytochrome c heme subunit; SPTR: C2A1Q0 Putative uncharacterized protein
YP_003656925.1	COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR006311:IPR010960:IPR017909:IPR019546:IPR 003953; KEGG: cco:CCC13826_1803 FAD binding domain-containing protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Twin-arginine translocation pathway, signal sequence, subgroup; PRIAM: Succinate dehydrogenase; SPTR: C2A1P9 Flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: FAD binding domain; TIGRFAM: flavocytochrome c
YP_003656926.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR016032:IPR001789; KEGG: cff:CFF8240_0140 two component transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C2A1P8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656927.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR009082:IPR005467:IPR004010; KEGG: ccv:CCV52592_0849 putative two component sensor kinase; PFAM: ATP-binding region ATPase domain protein; Cache domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C2A1P7 PAS domain S-box protein; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003656928.1	KEGG: ckr:CKR_0657 hypothetical protein; SPTR: B9DZN3 Putative uncharacterized protein
YP_003656929.1	COGs: COG1565 conserved hypothetical protein; InterPro IPR003788; KEGG: nis:NIS_1063 hypothetical protein; PFAM: protein of unknown function DUF185; SPTR: B6BN85 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1565
YP_003656930.1	COGs: COG3564 conserved hypothetical protein; InterPro IPR008497; KEGG: abu:Abu_0379 hypothetical protein; PFAM: protein of unknown function DUF779; SPTR: A8ERT0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF779)
YP_003656931.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR016162:IPR016161:IPR015590; KEGG: abu:Abu_0378 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; PRIAM: Aldehyde dehydrogenase (NAD(+)); SPTR: A8ERS9 Aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_003656932.1	COGs: COG3287 conserved hypothetical protein; InterProIPR003594:IPR009082:IPR005467:IPR003661:IPR 013702:IPR019494; KEGG: wsu:WS0901 GGDEF family protein; PFAM: domain of unknown function DUF1745; FIST C domain; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C2A1T3 Sensor protein; PFAM: FIST C domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; FIST N domain
YP_003656933.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: wsu:WS0900 putative two-component regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: Q7M9I3 PUTATIVE TWO-COMPONENT REGULATOR; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003656934.1	COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR005479:IPR013817:IPR013816:IPR011054:IPR 016185:IPR011761:IPR011764:IPR005481:IPR005482; KEGG: abu:Abu_0605 acetyl CoA carboxylase, biotin carboxylase subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: A8ESE6 Acetyl CoA carboxylase, biotin carboxylase subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase
YP_003656935.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017200:IPR011843:IPR007197; KEGG: mca:MCA1449 pyrroloquinoline quinone biosynthesis protein PqqE; PFAM: Radical SAM domain protein; SPTR: Q608P0 Coenzyme PQQ synthesis protein E; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis protein E
YP_003656936.1	InterPro IPR008792; KEGG: swd:Swoo_2250 pyrroloquinoline quinone biosynthesis protein PqqD; PFAM: coenzyme PQQ synthesis D; SPTR: B1KEF3 Coenzyme PQQ synthesis D; PFAM: Coenzyme PQQ synthesis protein D (PqqD)
YP_003656937.1	COGs: COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; InterPro IPR011845:IPR016084:IPR004305; KEGG: bgl:bglu_2g22320 coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4 domain protein; PRIAM: Pyrroloquinoline-quinone synthase; SPTR: C5AL13 Coenzyme PQQ biosynthesis protein C; TIGRFAM: coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C
YP_003656938.1	COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: abu:Abu_1059 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: A8ETP5 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase
YP_003656939.1	COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR011842; KEGG: psa:PST_2073 pyrroloquinoline quinone biosynthesis protein PqqB; SPTR: Q2BNP6 Coenzyme PQQ synthesis protein B; TIGRFAM: coenzyme PQQ biosynthesis protein B; TIGRFAM: coenzyme PQQ biosynthesis protein B
YP_003656940.1	COGs: COG4993 Glucose dehydrogenase; InterProIPR001479:IPR017512:IPR011047:IPR018391:IPR 019551:IPR002372:IPR019556; KEGG: pat:Patl_1855 pyrrolo-quinoline quinone; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Q15UR3 Pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family
YP_003656941.1	InterPro IPR013526:IPR000412:IPR013525; KEGG: pmy:Pmen_1945 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: A4XTP0 ABC-2 type transporter; PFAM: ABC-2 type transporter
YP_003656942.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: swd:Swoo_2260 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2BNR3 ABC efflux transporter, ATP-binding protein; PFAM: ABC transporter
YP_003656943.1	COGs: COG3391 conserved hypothetical protein; InterPro IPR011964:IPR015943:IPR011048; KEGG: psa:PST_2283 outer membrane protein, putative; SPTR: Q2BNR4 YVTN beta-propeller repeat family protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_003656944.1	KEGG: swd:Swoo_2258 hypothetical protein; SPTR: Q2BNR5 Putative uncharacterized protein
YP_003656945.1	InterPro IPR005180; KEGG: hypothetical protein; SPTR: B5ISA8 Conserved domain protein
YP_003656946.1	InterPro IPR010156:IPR002743; KEGG: cbb:CLD_2401 CRISPR-associated Cas family protein; PFAM: protein of unknown function DUF57; SPTR: B1IGS6 CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6
YP_003656947.1	KEGG: hypothetical protein; SPTR: C2A1U7 Putative uncharacterized protein
YP_003656948.1	COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010154:IPR013414; KEGG: cth:Cthe_2301 CRISPR-associated autoregulator DevR family protein protein; SPTR: C2A1U6 CRISPR-associated regulatory protein, DevR family; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; PFAM: CRISPR-associated negative autoregulator DevR/Csa2; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family
YP_003656949.1	InterPro IPR013422:IPR007552; KEGG: dtu:Dtur_0622 CRISPR-associated protein Cas5, Hmari subtype; PFAM: protein of unknown function DUF522; SPTR: C2A1U5 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain
YP_003656950.1	COGs: COG1203 helicase; InterProIPR002464:IPR006483:IPR006474:IPR014021:IPR 001650:IPR014001:IPR011545; KEGG: mfe:Mefer_1440 CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; SPTR: C2A1U4 CRISPR-associated helicase Cas3/CRISPR-associated HD domain protein; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3
YP_003656951.1	KEGG: fps:FP0483 hypothetical protein; SPTR: A6GWW6 Putative uncharacterized protein
YP_003656952.1	COGs: COG1468 RecB family exonuclease; InterPro IPR013343; KEGG: ckr:CKR_2446 hypothetical protein; PFAM: CRISPR-associated protein Cas4; SPTR: C2A1U3 CRISPR-associated exonuclease, Cas4 family; TIGRFAM: CRISPR-associated protein Cas4; PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4
YP_003656953.1	COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR019858:IPR002729; KEGG: ctc:CTC01463 hypothetical protein; PFAM: protein of unknown function DUF48; SPTR: C2A1U2 CRISPR-associated protein, Cas1 family; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; CRISPR-associated protein Cas1
YP_003656954.1	COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: cha:CHAB381_0393 CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; SPTR: C2A1U1 CRISPR-associated protein, Cas2 family; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2
YP_003656955.1	COGs: COG4922 conserved hypothetical protein; InterPro IPR009959; KEGG: cps:CPS_4656 putative lipoprotein; PFAM: protein of unknown function DUF1486; SPTR: A3UNR4 Putative uncharacterized protein
YP_003656956.1	COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: drm:Dred_0308 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A4J1A3 Transcriptional regulator, MarR family; PFAM: MarR family
YP_003656957.1	COGs: COG3019 metal-binding protein; InterPro IPR007332; KEGG: cco:CCC13826_1707 hypothetical protein; PFAM: protein of unknown function DUF411; SPTR: A7ZFU9 CopG protein; PFAM: Protein of unknown function, DUF
YP_003656958.1	COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: pat:Patl_1866 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q15UQ2 ABC transporter related; PFAM: ABC transporter
YP_003656959.1	COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: cps:CPS_1929 putative sulfonate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q483V7 Putative sulfonate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003656960.1	COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: cps:CPS_1928 putative sulfonate ABC transporter, periplasmic sulfonate-binding protein; SPTR: Q483V8 Putative sulfonate ABC transporter, periplasmic sulfonate-binding protein; PFAM: NMT1/THI5 like
YP_003656961.1	InterPro IPR009056; KEGG: mch:Mchl_1538 cytochrome c550; SPTR: C5AXV6 Putative cytochrome c550; PFAM: Cytochrome c
YP_003656962.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638; KEGG: swd:Swoo_2256 hypothetical protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Q2BNS3 Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003656963.1	KEGG: pmy:Pmen_1960 hypothetical protein; SPTR: A4XTQ5 Putative uncharacterized protein; PFAM: Sulphur oxidation protein SoxZ
YP_003656964.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dar:Daro_1026 beta-lactamase-like; SPTR: Q47H99 Beta-lactamase-like; PFAM: Metallo-beta-lactamase superfamily
YP_003656965.1	COGs: COG0260 Leucyl aminopeptidase; InterPro IPR000819:IPR008283; KEGG: abu:Abu_0702 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; PRIAM: Leucyl aminopeptidase; SPTR: A8ESP3 Aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_003656966.1	COGs: COG1284 conserved hypothetical protein; InterPro IPR003740:IPR019264; KEGG: abu:Abu_1411 hypothetical protein; PFAM: protein of unknown function DUF161; Protein of unknown function DUF2179; SPTR: A8EUP2 Conserved hypothetical membrane protein (DUF161); PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179)
YP_003656967.1	COGs: COG3449 DNA gyrase inhibitor; InterProIPR018062:IPR020449:IPR012287:IPR011256:IPR 009057:IPR018060:IPR000005:IPR010499; KEGG: abu:Abu_2021 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A8EWB5 Transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003656968.1	COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR015421:IPR015422:IPR015424:IPR004839; KEGG: abu:Abu_2022 aminotransferase, classes I and II; PFAM: aminotransferase class I and II; SPTR: A8EWB6 Aminotransferase, classes I and II; PFAM: Aminotransferase class I and II
YP_003656969.1	InterPro IPR010035:IPR012675:IPR016155:IPR003749; KEGG: abu:Abu_0256 hypothetical protein; PFAM: thiamineS protein; SPTR: B6BLP6 Thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS
YP_003656970.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006655:IPR009010:IPR006963:IPR006656:IPR 006657; KEGG: sun:SUN_0228 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: A6Q6S9 Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_003656971.1	COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR011335:IPR003509; KEGG: abu:Abu_0255 hypothetical protein; PFAM: protein of unknown function UPF0102; SPTR: A8ERF6 UPF0102 protein Abu_0255; PFAM: Uncharacterised protein family UPF0102
YP_003656972.1	COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR014743; KEGG: abu:Abu_1774 voltage-gated chloride channel family protein; PFAM: Cl- channel voltage-gated family protein; SPTR: A8EVP7 Voltage-gated chloride channel family protein; PFAM: Voltage gated chloride channel
YP_003656973.1	COGs: COG2928 conserved hypothetical protein; KEGG: sul:SYO3AOP1_0557 protein of unknown function DUF502; SPTR: C4C031 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF502)
YP_003656974.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR016040:IPR003148:IPR006153; KEGG: cps:CPS_1761 putative glutathione-regulated potassium-efflux system protein KefB; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; SPTR: Q484M3 Putative glutathione-regulated potassium-efflux system protein KefB; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family
YP_003656975.1	COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR001917:IPR015421:IPR015424:IPR004839; KEGG: abu:Abu_0254 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: A8ERF5 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II
YP_003656976.1	COGs: COG0288 Carbonic anhydrase; InterPro IPR015892:IPR001765; KEGG: abu:Abu_0253 carbonic anhydrase; PFAM: carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: A8ERF4 Carbonic anhydrase; PFAM: Carbonic anhydrase
YP_003656977.1	KEGG: abu:Abu_0252 hypothetical protein; SPTR: A8ERF3 Putative uncharacterized protein
YP_003656978.1	COGs: COG1060 Thiamine biosynthesis protein ThiH; InterProIPR005244:IPR020050:IPR013785:IPR006638:IPR 007197; KEGG: abu:Abu_0251 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ERF2 Putative uncharacterized protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily
YP_003656979.1	KEGG: abu:Abu_0250 hypothetical protein; SPTR: A8ERF1 Putative uncharacterized protein
YP_003656980.1	COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: abu:Abu_0249 putative lipoprotein; PFAM: protein of unknown function DUF374; SPTR: A8ERF0 Putative lipoprotein; PFAM: Domain of unknown function (DUF374)
YP_003656981.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR006463:IPR002792:IPR013848:IPR 006638:IPR007197; KEGG: abu:Abu_0248 tRNA-methylthiotransferase; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family
YP_003656982.1	KEGG: abu:Abu_0247 hypothetical protein; SPTR: A8ERE8 Putative uncharacterized protein
YP_003656983.1	COGs: COG0195 Transcription elongation factor; InterProIPR010213:IPR013735:IPR012340:IPR015946:IPR 009019:IPR016027:IPR003029; KEGG: abu:Abu_0246 transcription elongation factor NusA; PFAM: NusA domain protein; SPTR: A8ERE7 Transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA
YP_003656984.1	COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR000209:IPR002308:IPR015803:IPR014729:IPR 009080:IPR015273; KEGG: abu:Abu_0245 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: A8ERE6 Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_003656985.1	KEGG: ckr:CKR_1031 hypothetical protein; SPTR: B9E0Q7 Putative uncharacterized protein
YP_003656986.1	COGs: COG0238 Ribosomal protein S18; InterPro IPR018275:IPR001648; KEGG: abu:Abu_0243 30S ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: A8ERE4 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_003656987.1	COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR012340:IPR016027:IPR000424; KEGG: abu:Abu_0242 single-strand DNA binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: A8ERE3 Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_003656988.1	COGs: COG0360 Ribosomal protein S6; InterPro IPR000529:IPR014717:IPR020814; KEGG: abu:Abu_0241 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; SPTR: A8ERE2 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_003656989.1	COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: abu:Abu_0240 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta; SPTR: A8ERE1 Putative uncharacterized protein; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_003656990.1	COGs: COG0557 Exoribonuclease R; InterPro IPR001900; KEGG: abu:Abu_0238 ribonuclease R; PFAM: ribonuclease II; PRIAM: Exoribonuclease II; SPTR: A8ERD9 Ribonuclease R; PFAM: RNB domain; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases
YP_003656991.1	COGs: COG0059 Ketol-acid reductoisomerase; InterProIPR013023:IPR016040:IPR008927:IPR013116:IPR 000506; KEGG: abu:Abu_0237 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: A8ERD8 Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_003656992.1	COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: abu:Abu_0236 hypothetical protein; PFAM: protein of unknown function DUF610 YibQ; SPTR: A8ERD7 Putative uncharacterized protein; PFAM: Divergent polysaccharide deacetylase
YP_003656993.1	KEGG: cco:CCC13826_0296 hypothetical protein; SPTR: A7ZG56 Putative lipoprotein
YP_003656994.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090:IPR004089:IPR003660; KEGG: abu:Abu_0528 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ES71 Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003656995.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001320:IPR001638; KEGG: cjr:CJE0906 amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: Q5HUX7 Amino acid-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003656996.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: gsu:GSU2650 amino acid ABC transporter, permease protein, putative; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B9XMX9 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003656997.1	COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: abu:Abu_0235 smf protein, DNA processing chain A; PFAM: SMF family protein; SPTR: A8ERD6 SMF protein, DNA processing chain A; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_003656998.1	COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: sun:SUN_0117 NhaA family Na(+)/H(+) antiporter; PFAM: Na+/H+ antiporter NhaA; SPTR: A6Q6G8 Na(+)/H(+) antiporter nhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA
YP_003656999.1	COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterProIPR018265:IPR005758:IPR016040:IPR013221:IPR 004101:IPR000713; KEGG: abu:Abu_0234 UDP-N-acetylmuramate--L-alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: A8ERD5 UDP-N-acetylmuramate--alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_003657000.1	KEGG: abu:Abu_0233 hypothetical protein; SPTR: A8ERD4 Putative uncharacterized protein
YP_003657001.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR015421:IPR015424:IPR004839; KEGG: abu:Abu_0232 hypothetical protein; PFAM: aminotransferase class I and II; SPTR: A8ERD3 Aspartate aminotransferase, aminotransferase, classes I and II; PFAM: Aminotransferase class I and II
YP_003657002.1	COGs: COG3400 conserved hypothetical protein; InterPro IPR016040:IPR006037; KEGG: abu:Abu_0231 hypothetical protein; PFAM: TrkA-C domain protein; SPTR: A8ERD2 Putative uncharacterized protein; PFAM: TrkA-C domain
YP_003657003.1	KEGG: lba:Lebu_0382 single-stranded-DNA-specific exonuclease RecJ; SPTR: A1ANY5 Putative uncharacterized protein
YP_003657004.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR009082:IPR005467:IPR 003660:IPR003661; KEGG: abu:Abu_0455 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: A8ES06 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003657005.1	COGs: COG1538 Outer membrane protein; KEGG: ppd:Ppro_1440 outer membrane efflux protein; SPTR: A1ANY6 Outer membrane efflux protein; PFAM: Outer membrane efflux protein
YP_003657006.1	COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: abu:Abu_0230 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: A8ERD1 Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_003657007.1	COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: abu:Abu_0229 aspartyl/glutamyl-tRNA amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: A8ERD0 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit
YP_003657008.1	COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006504:IPR012335:IPR012336:IPR006660; KEGG: abu:Abu_0228 hypothetical protein; PFAM: arsenate reductase and related; SPTR: A8ERC9 Putative uncharacterized protein; PFAM: ArsC family; TIGRFAM: conserved hypothetical protein
YP_003657009.1	KEGG: cno:NT01CX_1883 hypothetical protein; SPTR: C5VPY4 Peptidase, M16 family
YP_003657010.1	KEGG: abu:Abu_1415 hypothetical protein; SPTR: A8EUP6 Putative uncharacterized protein
YP_003657011.1	COGs: COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR002480; KEGG: abu:Abu_0223 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase (DAHP synthetase class II); PFAM: DAHP synthetase class II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: A8ERC6 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase (DAHP synthetase class II); TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II
YP_003657012.1	COGs: COG0176 Transaldolase; InterPro IPR018225:IPR004732:IPR013785:IPR001585; KEGG: abu:Abu_0222 transaldolase; PFAM: Transaldolase; SPTR: A8ERC5 Transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: transaldolase, mycobacterial type
YP_003657013.1	COGs: COG0560 Phosphoserine phosphatase; InterPro IPR004469:IPR006383:IPR005834; KEGG: abu:Abu_0221 3-phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; PRIAM: Phosphoserine phosphatase; SPTR: A8ERC4 3-phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB
YP_003657014.1	COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227:IPR012337:IPR006641; KEGG: abu:Abu_0219 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: A8ERC2 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250
YP_003657015.1	KEGG: cbk:CLL_A2031 large conductance mechanosensitive channel protein; SPTR: B2TMA7 Large conductance mechanosensitive channel protein
YP_003657016.1	COGs: COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family); InterPro IPR014094; KEGG: plt:Plut_0084 hypothetical protein; SPTR: Q3B6Q7 Putative uncharacterized protein; TIGRFAM: membrane lipoprotein lipid attachment site; TIGRFAM: uncharacterized proteobacterial lipoprotein
YP_003657017.1	KEGG: pvi:Cvib_0157 hypothetical protein; SPTR: A4SCH1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1425)
YP_003657018.1	COGs: COG3014 conserved hypothetical protein; KEGG: cju:C8J_0082 putative lipoprotein; SPTR: A8FJP4 Putative lipoprotein
YP_003657019.1	COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); InterPro IPR002582:IPR004568:IPR008278; KEGG: abu:Abu_0217 holo-(acyl-carrier-protein) synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: A8ERC0 Holo-[acyl-carrier-protein] synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_003657020.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: abu:Abu_0216 oligopeptide ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8ERB9 Oligopeptide ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003657021.1	COGs: COG0414 Panthothenate synthetase; InterPro IPR003721:IPR014729; KEGG: abu:Abu_0215 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; PRIAM: Pantoate--beta-alanine ligase; SPTR: A8ERB8 Pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase
YP_003657022.1	KEGG: sun:SUN_0710 hypothetical protein; SPTR: A6Q860 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892)
YP_003657023.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR005840:IPR013848:IPR006638:IPR 007197; KEGG: abu:Abu_0214 MiaB-like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8ERB7 Ribosomal protein S12 methylthiotransferase rimO; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family
YP_003657024.1	COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR012795:IPR014729:IPR011063; KEGG: abu:Abu_0213 tRNA(Ile)-lysidine synthase; PFAM: PP-loop domain protein; SPTR: A8ERB6 tRNA(Ile)-lysidine synthase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_003657025.1	KEGG: abu:Abu_0212 hypothetical protein; SPTR: A8ERB5 Putative uncharacterized protein
YP_003657026.1	COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: abu:Abu_0211 flagellar protein FliS; PFAM: flagellar protein FliS; SPTR: A8ERB4 Flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS
YP_003657027.1	COGs: COG1345 Flagellar capping protein; InterPro IPR003481:IPR010809; KEGG: abu:Abu_0210 flagellar hook-associated protein 2; PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; SPTR: A8ERB3 Flagellar hook-associated protein 2; PFAM: Flagellar hook-associated protein 2 C-terminus
YP_003657028.1	COGs: COG1256 Flagellar hook-associated protein; InterPro IPR000896:IPR002371:IPR001444:IPR010930; KEGG: abu:Abu_0209 flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: A8ERB2 Flagellar hook-associated protein FlgK; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK
YP_003657029.1	COGs: COG2063 Flagellar basal body L-ring protein; InterPro IPR000527; KEGG: abu:Abu_0208 flagellar basal body L-ring protein FlgH; PFAM: flagellar L-ring protein; SPTR: A8ERB1 Flagellar basal body L-ring protein FlgH; PFAM: Flagellar L-ring protein
YP_003657030.1	KEGG: abu:Abu_0207 hypothetical protein; SPTR: A8ERB0 Putative uncharacterized protein
YP_003657031.1	COGs: COG1580 Flagellar basal body-associated protein; InterPro IPR005503; KEGG: abu:Abu_0206 flagellar basal body-associated protein; PFAM: flagellar basal body-associated protein FliL; SPTR: A8ERA9 Flagellar basal body-associated protein; PFAM: Flagellar basal body-associated protein FliL
YP_003657032.1	KEGG: abu:Abu_0205 hypothetical protein; SPTR: A8ERA8 Putative uncharacterized protein
YP_003657033.1	KEGG: abu:Abu_0204 hypothetical protein; SPTR: A8ERA7 Putative uncharacterized protein
YP_003657034.1	InterPro IPR002191; KEGG: abu:Abu_0203 flagellar basal body protein FliQ; PFAM: export protein FliQ family 3; SPTR: A8ERA6 Flagellar basal body protein FliQ; PFAM: Bacterial export proteins, family 3
YP_003657035.1	KEGG: abu:Abu_0202 hypothetical protein; SPTR: A8ERA5 Putative uncharacterized protein
YP_003657036.1	COGs: COG1706 Flagellar basal-body P-ring protein; InterPro IPR001782; KEGG: abu:Abu_0201 flagellar P-ring protein FlgI; PFAM: flagellar P-ring protein; SPTR: A8ERA4 Flagellar P-ring protein; PFAM: Flagellar P-ring protein
YP_003657037.1	COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689:IPR001543; KEGG: abu:Abu_0200 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: A8ERA3 Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM
YP_003657038.1	COGs: COG0418 Dihydroorotase; InterPro IPR002195:IPR004721:IPR006992; KEGG: abu:Abu_0199 dihydroorotase; PFAM: amidohydrolase 2; PRIAM: Dihydroorotase; SPTR: A8ERA2 Dihydroorotase; TIGRFAM: dihydroorotase, homodimeric type; PFAM: Amidohydrolase; TIGRFAM: dihydroorotase, homodimeric type
YP_003657039.1	COGs: COG0347 Nitrogen regulatory protein PII; InterProIPR002332:IPR017918:IPR002187:IPR015867:IPR 011322; KEGG: abu:Abu_0198 nitrogen regulatory protein PII; PFAM: nitrogen regulatory protein P-II; SPTR: A8ERA1 Nitrogen regulatory protein PII; PFAM: Nitrogen regulatory protein P-II
YP_003657040.1	COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: tdn:Suden_0643 Rh-like protein/ammonium transporter; PFAM: ammonium transporter; SPTR: Q30SV9 Amt-family transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_003657041.1	COGs: COG0347 Nitrogen regulatory protein PII; InterProIPR002332:IPR017918:IPR002187:IPR015867:IPR 011322; KEGG: abu:Abu_0198 nitrogen regulatory protein PII; PFAM: nitrogen regulatory protein P-II; SPTR: A8ERA1 Nitrogen regulatory protein PII; PFAM: Nitrogen regulatory protein P-II
YP_003657042.1	COGs: COG0004 Ammonia permease; InterPro IPR018047:IPR019879:IPR001905; KEGG: sil:SPO3723 ammonium transporter; PFAM: ammonium transporter; SPTR: A8TXN7 Ammonium transporter; TIGRFAM: putative ammonium transporter, marine subtype; ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter
YP_003657043.1	KEGG: abu:Abu_0196 hypothetical protein; SPTR: A8ER99 Putative uncharacterized protein
YP_003657044.1	KEGG: abu:Abu_0195 hypothetical protein; SPTR: A8ER98 Putative uncharacterized protein
YP_003657045.1	COGs: COG2844 UTP:GlnB (protein PII) uridylyltransferase; InterPro IPR013546:IPR006674; KEGG: abu:Abu_0194 protein-P-II uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; PRIAM: [Protein-PII] uridylyltransferase; SPTR: A8ER97 Protein-P-II uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; HD domain; TIGRFAM: [Protein-PII] uridylyltransferase
YP_003657046.1	COGs: COG4232 Thiol:disulfide interchange protein; InterProIPR017937:IPR012335:IPR012336:IPR017936:IPR 003834:IPR013766; KEGG: abu:Abu_2187 thiol:disulfide interchange protein DsbD; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; SPTR: A8EWS8 Thiol:disulfide interchange protein DsbD; PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region
YP_003657047.1	COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR017937:IPR006662:IPR012335:IPR012336:IPR 017936:IPR013766; KEGG: pgn:PGN_0033 thioredoxin; PFAM: Thioredoxin domain; SPTR: C6LDG3 Thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_003657048.1	InterPro IPR001763; KEGG: nis:NIS_1608 rhodanese family protein; SPTR: A6Q5F5 Rhodanese family protein; PFAM: Rhodanese-like domain
YP_003657049.1	KEGG: abu:Abu_2190 hypothetical protein; SPTR: A8EWT1 Putative uncharacterized protein
YP_003657050.1	COGs: COG0688 Phosphatidylserine decarboxylase; InterPro IPR005221:IPR003817; KEGG: abu:Abu_2192 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: A8EWT3 Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor
YP_003657051.1	KEGG: sun:SUN_0227 hypothetical protein; SPTR: B6BLV7 Putative uncharacterized protein
YP_003657052.1	COGs: COG2821 Membrane-bound lytic murein transglycosylase; InterPro IPR005300:IPR010611; KEGG: abu:Abu_2194 peptidoglycan N-acetylmuramoylhydrolase; PFAM: MltA domain protein; 3D domain protein; SPTR: A8EWT5 Peptidoglycan N-acetylmuramoylhydrolase; PFAM: MltA specific insert domain; 3D domain
YP_003657053.1	KEGG: tpd:Teth39_1789 RecD/TraA family helicase; SPTR: B0KC72 Helicase, RecD/TraA family
YP_003657054.1	COGs: COG0443 Molecular chaperone; InterPro IPR018181:IPR012725:IPR001023:IPR013126; KEGG: abu:Abu_2195 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: A8EWT6 Chaperone protein dnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_003657055.1	COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740:IPR013805:IPR009012; KEGG: abu:Abu_2196 heat shock protein GrpE; PFAM: GrpE protein; SPTR: A8EWT7 Protein grpE; PFAM: GrpE
YP_003657056.1	COGs: COG1420 Transcriptional regulator of heat shock gene; InterPro IPR011991; KEGG: abu:Abu_2197 putative heat shock regulator; SPTR: A8EWT8 Putative heat shock regulator
YP_003657057.1	KEGG: abu:Abu_0109 hypothetical protein; SPTR: B1QBV4 Putative uncharacterized protein
YP_003657058.1	InterPro IPR008201; KEGG: sun:SUN_0813 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: B6BKB1 Putative uncharacterized protein; PFAM: Protein of unknown function DUF86
YP_003657059.1	InterPro IPR002934; KEGG: abu:Abu_0798 hypothetical protein; PFAM: DNA polymerase beta domain protein region; SPTR: A8ESY9 Putative uncharacterized protein; PFAM: Nucleotidyltransferase domain
YP_003657060.1	KEGG: abu:Abu_0110 hypothetical protein; SPTR: A8ER21 Putative uncharacterized protein
YP_003657061.1	KEGG: abu:Abu_0110 hypothetical protein; SPTR: A8ER21 Putative uncharacterized protein
YP_003657062.1	InterPro IPR017880:IPR018004; KEGG: pdi:BDI_2962 hypothetical protein; PFAM: KilA, N-terminal/APSES-type HTH DNA-binding domain; SPTR: A6LG56 Putative uncharacterized protein; PFAM: KilA-N domain
YP_003657063.1	KEGG: tdn:Suden_0322 hypothetical protein; SPTR: B6BLW1 Putative uncharacterized protein
YP_003657064.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: abu:Abu_2094 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8EWI8 Major facilitator superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003657065.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011991:IPR011006:IPR001789:IPR001867; KEGG: cco:CCC13826_0722 response regulator receiver domain-containing protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A7ZBM3 DNA-binding response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003657066.1	COGs: COG0101 Pseudouridylate synthase; InterProIPR001406:IPR020094:IPR020095:IPR020103:IPR 020097; KEGG: abu:Abu_2199 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: A8EWU0 Pseudouridylate synthase; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_003657067.1	COGs: COG0795 permease; InterPro IPR005495; KEGG: abu:Abu_2200 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: A8EWU1 Conserved hypothetical membrane protein; PFAM: Predicted permease YjgP/YjgQ family
YP_003657068.1	COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045; KEGG: nam:NAMH_1167 peptidase A24A, prepilin type IV; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; SPTR: B9LAA5 Peptidase A24A, prepilin type IV; PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family
YP_003657069.1	COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR018520:IPR001441; KEGG: abu:Abu_2202 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: A8EWU3 Undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_003657070.1	COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR005252:IPR003382:IPR007085; KEGG: abu:Abu_2203 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: A8EWU4 Bifunctional DNA /pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_003657071.1	COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterProIPR018357:IPR005882:IPR011004:IPR001228:IPR 001451; KEGG: abu:Abu_2204 bifunctional UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; PRIAM: Glucosamine-1-phosphate N-acetyltransferase; SPTR: A8EWU5 Bifunctional protein glmU; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_003657072.1	InterPro IPR020683:IPR002110; KEGG: abu:Abu_2205 ankyrin repeat-containing protein; SPTR: A8EWU6 Ankyrin repeat protein; PFAM: Ankyrin repeat
YP_003657073.1	COGs: COG1202 Superfamily II helicase; InterPro IPR014021:IPR001650:IPR014001; KEGG: abu:Abu_2206 ATP-dependent RNA helicase; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: A8EWU7 Probable ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; Mitochondrial degradasome RNA helicase subunit C terminal
YP_003657074.1	COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280:IPR011869; KEGG: abu:Abu_2207 tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; PRIAM: tRNA (uracil-5-)-methyltransferase; SPTR: A8EWU8 tRNA (uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase
YP_003657075.1	COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR001029; KEGG: hpb:HELPY_0771 flagellin A; PFAM: flagellin domain protein; SPTR: A8BSM2 Flagellin A; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_003657076.1	COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR001029; KEGG: nam:NAMH_1612 flagellin; PFAM: flagellin domain protein; SPTR: A8BSM5 Flagellin B; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_003657077.1	COGs: COG2604 conserved hypothetical protein; InterPro IPR018253:IPR002826; KEGG: tdn:Suden_0174 hypothetical protein; PFAM: protein of unknown function DUF115; SPTR: B6BGE5 Putative uncharacterized protein; PFAM: Protein of unknown function DUF115
YP_003657078.1	COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347; KEGG: cjj:CJJ81176_1423 phosphoheptose isomerase; PFAM: sugar isomerase (SIS); SPTR: Q5HSZ5 Phosphoheptose isomerase; PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase
YP_003657079.1	COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835; KEGG: cjr:CJE1608 capsular biosynthesis nucleotidyltransferase, putative; PFAM: Nucleotidyl transferase; SPTR: Q5HSZ6 Capsular biosynthesis nucleotidyltransferase, putative; PFAM: Nucleotidyl transferase
YP_003657080.1	COGs: COG2605 kinase related to galactokinase and mevalonate kinase; InterProIPR014606:IPR001174:IPR014721:IPR020568:IPR 006204:IPR013750; KEGG: glo:Glov_0793 GHMP kinase; PFAM: GHMP kinase; GHMP kinase domain protein; SPTR: B3E4V4 GHMP kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain
YP_003657081.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015421:IPR015424; KEGG: mag:amb1072 pyridoxal phosphate-dependent enzyme; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Q2W8E9 Predicted pyridoxal phosphate-dependent enzyme; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003657082.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: cyt:cce_1234 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q4C3G4 Similar to Nucleoside-diphosphate-sugar epimerases; PFAM: NAD dependent epimerase/dehydratase family
YP_003657083.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: mma:MM_0658 GDP-fucose synthetase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Q8PZ36 GDP-fucose synthetase; PFAM: NAD dependent epimerase/dehydratase family
YP_003657084.1	COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: glo:Glov_0795 transketolase domain protein; PFAM: Transketolase domain protein; SPTR: B6BTL3 Transketolase; PFAM: Transketolase, thiamine diphosphate binding domain
YP_003657085.1	COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR015941:IPR009014:IPR005475:IPR005476; KEGG: glo:Glov_0796 transketolase central region; PFAM: Transketolase central region; Transketolase domain protein; SPTR: B6BTL4 1-deoxy-D-xylulose-5-phosphate synthase, putative; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_003657086.1	InterPro IPR002781; KEGG: mca:MCA1931 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Q606T4 Putative membrane protein; PFAM: Sulfite exporter TauE/SafE
YP_003657087.1	COGs: COG0529 Adenylylsulfate kinase and related kinase; InterPro IPR002891; KEGG: cyh:Cyan8802_4040 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; SPTR: B3EYL3 Adenylyl-sulfate kinase; PFAM: Adenylylsulphate kinase
YP_003657088.1	COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); InterPro IPR014729:IPR015947:IPR002650; KEGG: hbu:Hbut_1499 sulfate adenylyltransferase; PFAM: ATP-sulfurylase; PRIAM: Sulfate adenylyltransferase; SPTR: Q5M6U8 Putative sulfate adenylyltransferase; PFAM: ATP-sulfurylase; TIGRFAM: ATP sulphurylase
YP_003657089.1	COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015813:IPR011037; KEGG: tna:CTN_0477 pyruvate kinase; PFAM: Pyruvate kinase barrel; PRIAM: Pyruvate kinase; SPTR: Q5M6U9 Pyruvate kinase; PFAM: Pyruvate kinase, barrel domain
YP_003657090.1	COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR020583:IPR006240:IPR000760; KEGG: hhe:HH1440 hypothetical protein; PFAM: inositol monophosphatase; SPTR: C5F143 CysQ; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial
YP_003657091.1	InterPro IPR007554; KEGG: cff:CFF8240_1624 hypothetical protein; PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; SPTR: C3XKE6 Predicted protein
YP_003657092.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: cbl:CLK_2103 putative molybdopterin cofactor synthesis protein A; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B1KYD4 Putative molybdopterin cofactor synthesis protein A; PFAM: Radical SAM superfamily
YP_003657093.1	COGs: COG1032 Fe-S oxidoreductase; InterPro IPR013785:IPR006158:IPR006638:IPR007197; KEGG: glo:Glov_0797 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B3E4V8 Radical SAM domain protein; PFAM: Radical SAM superfamily; B12 binding domain
YP_003657094.1	InterPro IPR003016; KEGG: cac:CAC2177 hypothetical protein; SPTR: Q97H36 Ucharacterized protein, CGEB homolog
YP_003657095.1	KEGG: cac:CAC2177 hypothetical protein; SPTR: Q97H36 Ucharacterized protein, CGEB homolog
YP_003657096.1	COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR018211:IPR001670; KEGG: cju:C8J_1329 hypothetical protein; PFAM: iron-containing alcohol dehydrogenase; SPTR: A8FN90 Putative uncharacterized protein; PFAM: Iron-containing alcohol dehydrogenase; TIGRFAM: phosphonate metabolism-associated iron-containing alcohol dehydrogenase
YP_003657097.1	COGs: COG4032 thiamine-pyrophosphate-binding protein; InterPro IPR017684:IPR011766; KEGG: cju:C8J_1330 hypothetical protein; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A8FN91 Putative uncharacterized protein; TIGRFAM: phosphonopyruvate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: phosphonopyruvate decarboxylase
YP_003657098.1	COGs: COG2513 PEP phosphonomutase; InterProIPR004821:IPR012698:IPR014729:IPR015813:IPR 004820; KEGG: dal:Dalk_1323 phosphoenolpyruvate phosphomutase; PFAM: cytidylyltransferase; SPTR: B8F9S8 Phosphoenolpyruvate phosphomutase; TIGRFAM: phosphoenolpyruvate phosphomutase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: phosphoenolpyruvate phosphomutase; cytidyltransferase-related domain
YP_003657099.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: bhy:BHWA1_02682 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C0R2I6 Radical SAM domain protein; PFAM: Radical SAM superfamily
YP_003657100.1	InterPro IPR007074; KEGG: abu:Abu_2251 hypothetical protein; PFAM: LicD family protein; SPTR: A8EWZ1 Putative uncharacterized protein; PFAM: LICD Protein Family
YP_003657101.1	COGs: COG0439 Biotin carboxylase; InterProIPR013817:IPR013815:IPR016185:IPR011761:IPR 003135; KEGG: abu:Abu_2250 ATP-grasp domain-containing protein; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; SPTR: A8EWZ0 ATP-grasp (A) domain protein; PFAM: ATP-grasp domain
YP_003657102.1	KEGG: abu:Abu_2249 flagellin modification protein FlmE; SPTR: A8EWY9 Flagellin modification protein FlmE
YP_003657103.1	InterPro IPR015424; KEGG: abu:Abu_2248 hypothetical protein; SPTR: A8EWY8 Putative uncharacterized protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003657104.1	COGs: COG3980 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase; KEGG: abu:Abu_2247 glycosyltransferase; SPTR: A8EWY7 Glycosyltransferase; PFAM: Glycosyltransferase family 28 C-terminal domain
YP_003657105.1	COGs: COG2089 Sialic acid synthase; InterProIPR020030:IPR013785:IPR006190:IPR013132:IPR 013974; KEGG: abu:Abu_2246 N-acetylneuraminic acid synthetase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acylneuraminate-9-phosphate synthase; SPTR: A8EWY6 N-acetylneuraminic acid synthetase; TIGRFAM: pseudaminic acid synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase
YP_003657106.1	COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR020039:IPR003329; KEGG: abu:Abu_2245 acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: A8EWY5 Acylneuraminate cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase; PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase
YP_003657107.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterProIPR000653:IPR020026:IPR015421:IPR015422:IPR 015424; KEGG: abu:Abu_2244 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8EWY4 DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
YP_003657108.1	COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR020025:IPR016040:IPR003869; KEGG: abu:Abu_2243 UDP GlcNAc dehydratase/reductase PseB, putative; PFAM: polysaccharide biosynthesis protein CapD; SPTR: A8EWY3 UDP GlcNAc dehydratase/reductase PseB, putative; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase
YP_003657109.1	KEGG: abu:Abu_2242 hypothetical protein; SPTR: A8EWY2 Putative uncharacterized protein
YP_003657110.1	COGs: COG0468 RecA/RadA recombinase; InterProIPR020584:IPR013765:IPR001553:IPR020588:IPR 020587:IPR003593; KEGG: abu:Abu_2241 recombinase A; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: A8EWY1 Protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_003657111.1	COGs: COG0148 Enolase; InterPro IPR020809:IPR000941:IPR020811:IPR020810; KEGG: abu:Abu_2240 phosphopyruvate hydratase; PFAM: Enolase-like; PRIAM: Phosphopyruvate hydratase; SPTR: A8EWY0 Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_003657112.1	InterPro IPR007060; KEGG: abu:Abu_2239 hypothetical protein; PFAM: Septum formation initiator; SPTR: A8EWX9 Putative uncharacterized protein; PFAM: Septum formation initiator
YP_003657113.1	KEGG: abu:Abu_2238 hypothetical protein; SPTR: A8EWX8 Putative uncharacterized protein
YP_003657114.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: tdn:Suden_0168 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; SPTR: Q30U82 Sodium/hydrogen exchanger; PFAM: Sodium/hydrogen exchanger family
YP_003657115.1	COGs: COG0502 Biotin synthase; InterProIPR002684:IPR013785:IPR006638:IPR007197:IPR 010722; KEGG: abu:Abu_2237 biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A8EWX7 Biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase
YP_003657116.1	COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: abu:Abu_2236 hypothetical protein; PFAM: metallophosphoesterase; SPTR: A8EWX6 Putative uncharacterized protein; TIGRFAM: phosphodiesterase, MJ0936 family; TIGRFAM: phosphoesterase, MJ0936 family
YP_003657117.1	COGs: COG0550 Topoisomerase IA; InterProIPR005733:IPR000380:IPR013824:IPR013826:IPR 006154:IPR003601:IPR003602:IPR006171:IPR013497; KEGG: abu:Abu_2235 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; SPTR: A8EWX5 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003657118.1	COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterPro IPR003170:IPR016169:IPR011601:IPR016166; KEGG: abu:Abu_2234 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: A8EWX4 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_003657119.1	COGs: COG2107 periplasmic solute-binding protein; InterPro IPR003794; KEGG: abu:Abu_2233 hypothetical protein; PFAM: protein of unknown function DUF191; SPTR: A8EWX3 Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)
YP_003657120.1	InterPro IPR018247:IPR018249; KEGG: cps:CPS_2228 hypothetical protein; SPTR: Q482R4 Putative uncharacterized protein
YP_003657121.1	COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096:IPR001750; KEGG: wsu:WS0488 NADH dehydrogenase subunit N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Q7MA37 NADH-UBIQUINONE OXIDOREDUCTASE, NQO14 SUBUNIT NQO14; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_003657122.1	COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227:IPR003918:IPR001750; KEGG: tdn:Suden_1816 NADH dehydrogenase subunit M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: B6BI66 Donor-ubiquinone reductase I; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_003657123.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003945:IPR003916:IPR018393:IPR001516:IPR 001750:IPR010934; KEGG: nis:NIS_0300 NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH dehydrogenase subunit 5 domain protein; SPTR: A6Q1Q5 NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH dehydrogenase subunit 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_003657124.1	COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: sun:SUN_2221 NADH dehydrogenase subunit K; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: A6QCF2 NADH-quinone oxidoreductase, chain K; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_003657125.1	COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: tdn:Suden_1819 NADH dehydrogenase subunit J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: Q30PI8 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_003657126.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterProIPR017900:IPR010226:IPR009051:IPR017896:IPR 001450; KEGG: sun:SUN_2223 NADH dehydrogenase subunit I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6QCF4 NADH-quinone oxidoreductase, chain I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_003657127.1	COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086:IPR001694; KEGG: nis:NIS_0296 NADH dehydrogenase subunit H; PFAM: respiratory-chain NADH dehydrogenase subunit 1; PRIAM: NADH dehydrogenase (quinone); SPTR: A6Q1Q1 NADH-quinone oxidoreductase subunit H; PFAM: NADH dehydrogenase
YP_003657128.1	COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR017900:IPR001041:IPR017896:IPR019574:IPR 001450; KEGG: nis:NIS_0295 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6Q1Q0 NADH-quinone oxidoreductase, chain G; PFAM: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain
YP_003657129.1	KEGG: abu:Abu_2232 hypothetical protein; SPTR: A8EWX2 Putative uncharacterized protein
YP_003657130.1	KEGG: sun:SUN_2228 hypothetical protein; SPTR: A6QCF9 Putative uncharacterized protein
YP_003657131.1	COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR010219:IPR001135; KEGG: nis:NIS_0291 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: C1ZYJ9 NADH dehydrogenase subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit
YP_003657132.1	COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR020396:IPR010218:IPR001268; KEGG: tdn:Suden_1827 NADH dehydrogenase subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: Q30PI0 NADH-quinone oxidoreductase; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C
YP_003657133.1	COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006138:IPR006137; KEGG: nis:NIS_0289 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: C1ZYK1 NADH dehydrogenase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_003657134.1	COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: sun:SUN_2232 NADH dehydrogenase subunit A; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: A6QCG3 NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_003657135.1	COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: abu:Abu_2231 AAA ATPase family protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A8EWX1 AAA family ATPase; PFAM: ATPase family associated with various cellular activities (AAA)
YP_003657136.1	KEGG: abu:Abu_2230 hypothetical protein; SPTR: A8EWX0 Putative uncharacterized protein
YP_003657137.1	KEGG: hpy:HP1520 hypothetical protein; SPTR: O26049 Putative uncharacterized protein
YP_003657138.1	KEGG: conserved hypothetical protein; SPTR: Q8IJP4 Conserved protein
YP_003657139.1	InterPro IPR007637; KEGG: mja:MJ0600 restriction enzyme, type II R/M system 2; PFAM: DpmII restriction endonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Q58017 Type-2 restriction enzyme MjaIII; PFAM: DpnII restriction endonuclease
YP_003657140.1	InterPro IPR004919:IPR011089; KEGG: amr:AM1_1270 hypothetical protein; PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; SPTR: C2TXK4 Putative uncharacterized protein; PFAM: Protein of unknown function DUF262; Protein of unknown function (DUF1524)
YP_003657141.1	COGs: COG0338 Site-specific DNA methylase; InterPro IPR002052:IPR012326:IPR002294:IPR012327; KEGG: gtn:GTNG_2051 putative adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: C7LLT2 GATC--recognizing Type II restriction modification system (MmyCV) adenine DNA methyltransferase subunit; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam)
YP_003657142.1	COGs: COG0863 DNA modification methylase; InterPro IPR002052:IPR001091:IPR002941; KEGG: rsd:TGRD_745 DNA modification methylase; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: B1GYY5 DNA modification methylase; PFAM: DNA methylase
YP_003657143.1	KEGG: eel:EUBELI_01769 hypothetical protein; SPTR: C6QVD8 Putative uncharacterized protein
YP_003657144.1	COGs: COG0648 Endonuclease IV; InterPro IPR018246:IPR001719:IPR013022:IPR012307; KEGG: abu:Abu_2221 endonuclease IV; PFAM: Xylose isomerase domain protein TIM barrel; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: A8EWW1 Probable endonuclease 4; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_003657145.1	COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: cps:CPS_4690 L-lactate permease; PFAM: L-lactate permease; SPTR: Q47V38 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; TIGRFAM: L-lactate transport
YP_003657146.1	KEGG: RabGAP/TBC domain-containing protein; SPTR: Q54YR7 RabGAP/TBC domain-containing protein
YP_003657147.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010; KEGG: abu:Abu_0788 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; SPTR: A8ESX9 Methyl-accepting chemotaxis protein; PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003657148.1	COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR012349:IPR009002; KEGG: abu:Abu_1936 hypothetical protein; SPTR: A8EW35 Putative uncharacterized protein; PFAM: Flavin reductase like domain
YP_003657149.1	COGs: COG0114 Fumarase; InterProIPR020557:IPR005677:IPR000362:IPR008948:IPR 018951; KEGG: abu:Abu_0719 fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like; SPTR: A8ESR0 Fumarate hydratase, class II; TIGRFAM: fumarate hydratase, class II; PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II
YP_003657150.1	KEGG: abu:Abu_1929 hypothetical protein; SPTR: A8EW28 Putative uncharacterized protein
YP_003657151.1	COGs: COG2301 Citrate lyase beta subunit; InterPro IPR011206:IPR015813; KEGG: abu:Abu_1927 putative citrate lyase; SPTR: A8EW26 Putative citrate lyase; PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_003657152.1	COGs: COG2030 Acyl dehydratase; InterPro IPR016790:IPR002539; KEGG: abu:Abu_1926 MaoC family protein; PFAM: MaoC domain protein dehydratase; SPTR: A8EW25 MaoC family protein; PFAM: MaoC like domain
YP_003657153.1	COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR020845:IPR015813:IPR000873:IPR005000; KEGG: abu:Abu_1925 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; HpcH/HpaI aldolase; SPTR: A8EW24 AMP-dependent synthetase and ligase; PFAM: HpcH/HpaI aldolase/citrate lyase family; AMP-binding enzyme
YP_003657154.1	COGs: COG2301 Citrate lyase beta subunit; InterPro IPR011206:IPR015813:IPR005000; KEGG: abu:Abu_1924 hypothetical protein; PFAM: HpcH/HpaI aldolase; SPTR: A8EW23 Putative uncharacterized protein; PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_003657155.1	COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: gwc:GWCH70_1911 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SPTR: A4BYY8 Transcriptional regulator, IclR family protein; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003657156.1	KEGG: abu:Abu_2219 hypothetical protein; SPTR: A8EWV9 Putative uncharacterized protein
YP_003657157.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR009082:IPR005467:IPR 003661; KEGG: abu:Abu_1536 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EV12 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003657158.1	COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: abu:Abu_2218 hypothetical protein; PFAM: protein of unknown function DUF208; SPTR: A8EWV8 Putative uncharacterized protein; PFAM: Uncharacterized BCR, COG1636
YP_003657159.1	COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: abu:Abu_2217 ipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: A8EWV7 Lipid A disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase
YP_003657160.1	COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR010084:IPR013114; KEGG: abu:Abu_2216 3-hydroxymyristoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: A8EWV6 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_003657161.1	COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR018357:IPR010137:IPR011004:IPR001451; KEGG: abu:Abu_2215 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR: A8EWV5 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_003657162.1	COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR002078:IPR004487:IPR003593:IPR010603:IPR 013093:IPR019489; KEGG: abu:Abu_2214 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: A8EWV4 ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_003657163.1	COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: abu:Abu_2213 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: A8EWV3 Rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_003657164.1	COGs: COG1792 Cell shape-determining protein; KEGG: abu:Abu_2212 rod shape-determining protein MreC; SPTR: A8EWV2 Rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC
YP_003657165.1	COGs: COG2200 FOG: EAL domain; InterPro IPR011006:IPR001789:IPR001633:IPR000160; KEGG: wsu:WS0108 GGDEF family protein; PFAM: EAL domain protein; response regulator receiver; GGDEF domain containing protein; SMART: EAL domain protein; response regulator receiver; GGDEF domain containing protein; SPTR: Q7MAP6 GGDEF FAMILY PROTEIN; PFAM: EAL domain; GGDEF domain; Response regulator receiver domain
YP_003657166.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR009082:IPR005467; KEGG: nam:NAMH_0558 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B6BGM8 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003657167.1	COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783:IPR017938; KEGG: abu:Abu_2211 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: A8EWV1 Riboflavin synthase, alpha subunit; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_003657168.1	COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR020595:IPR004416:IPR013027:IPR002218; KEGG: abu:Abu_2210 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: glucose-inhibited division protein A; SPTR: A8EWV0 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: glucose inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A
YP_003657169.1	InterPro IPR013784; KEGG: saf:SULAZ_0740 hypothetical protein; SPTR: C1DUD8 Putative uncharacterized protein
YP_003657170.1	InterPro IPR019613; KEGG: cyt:cce_4827 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: B1X214 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region
YP_003657171.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089; KEGG: abu:Abu_1831 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8EVU8 Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003657172.1	KEGG: viral A-type inclusion protein ; K02331 DNA polymerase phi subunit; SPTR: A2FSZ8 Viral A-type inclusion protein, putative
YP_003657173.1	KEGG: conserved hypothetical protein; SPTR: Q8I3F7 Putative uncharacterized protein
YP_003657174.1	KEGG: mfa:Mfla_1690 hypothetical protein; SPTR: A6GTJ6 Putative uncharacterized protein
YP_003657175.1	KEGG: bpu:BPUM_3698 hypothetical protein; SPTR: C5RDX9 Putative uncharacterized protein
YP_003657176.1	COGs: COG1858 Cytochrome c peroxidase; InterPro IPR009056:IPR004852; KEGG: abu:Abu_2140 cytochrome c551 peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: A8EWN1 Cytochrome c551 peroxidase; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase
YP_003657177.1	InterPro IPR000835:IPR011991; KEGG: abu:Abu_0816 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: A8ET07 Putative transcriptional regulator (MarR family); PFAM: MarR family
YP_003657178.1	COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0815 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A8ET06 Outer membrane efflux protein; PFAM: Outer membrane efflux protein
YP_003657179.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR018120; KEGG: abu:Abu_0814 multidrug efflux RND membrane fusion protein; PFAM: secretion protein HlyD family protein; SPTR: A8ET05 Multidrug efflux RND membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_003657180.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: tdn:Suden_0536 resistance-nodulation-cell division family transporter; PFAM: acriflavin resistance protein; SPTR: Q30T66 Resistance-Nodulation-Cell Division Superfamily transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_003657181.1	KEGG: nis:NIS_1586 hypothetical protein; SPTR: A6Q5D4 Putative uncharacterized protein
YP_003657182.1	COGs: COG0348 Polyferredoxin; InterPro IPR014116:IPR017900:IPR017896; KEGG: abu:Abu_2256 4Fe-4S ferredoxin, iron-sulfur binding; SPTR: A8EWZ6 4Fe-4S ferredoxin, iron-sulfur binding; TIGRFAM: cytochrome c oxidase accessory protein CcoG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG
YP_003657183.1	COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR004468:IPR017926:IPR017456:IPR000991; KEGG: abu:Abu_2257 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: A8EWZ7 CTP synthetase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_003657184.1	COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610:IPR001667:IPR003156; KEGG: abu:Abu_2258 single-stranded DNA-specific exonuclease; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: A8EWZ8 Single-stranded DNA-specific exonuclease; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_003657185.1	KEGG: abu:Abu_2259 hypothetical protein; SPTR: A8EWZ9 Putative uncharacterized protein
YP_003657186.1	KEGG: abu:Abu_2260 hypothetical protein; SPTR: A8EX00 Putative uncharacterized protein
YP_003657187.1	COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006287:IPR002818; KEGG: abu:Abu_2261 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein ThiJ; PFAM: ThiJ/PfpI domain protein; SPTR: A8EX01 4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein ThiJ; TIGRFAM: DJ-1 family protein; PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein
YP_003657188.1	KEGG: mag:amb4390 hypothetical protein; SPTR: B6BI16 Putative uncharacterized protein
YP_003657189.1	COGs: COG4252 transmembrane sensor domain; InterPro IPR001054:IPR007890; KEGG: abu:Abu_0928 adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: A8ETB4 Adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain
YP_003657190.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: wsu:WS1723 alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol; PFAM: glycosyl transferase group 1; SPTR: Q7M8D1 ALPHA-D-MANNOSE-ALPHA(1-6)PHOSPHATIDYL MYO-INOSITO; PFAM: Glycosyl transferases group 1
YP_003657191.1	COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: wsu:WS1724 hypothetical protein; PFAM: metallophosphoesterase; SPTR: A6DDM1 Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase
YP_003657192.1	COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: aae:aq_1386 hypothetical protein; PFAM: Patatin; SPTR: C1ZZD1 Predicted esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase
YP_003657193.1	COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805:IPR003141:IPR016195:IPR004013:IPR 011708:IPR004365; KEGG: abu:Abu_2262 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; SPTR: A8EX02 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_003657194.1	COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: abu:Abu_2263 stationary phase survival protein SurE; PFAM: Survival protein SurE; PRIAM: 5'-nucleotidase; SPTR: A8EX03 5'-nucleotidase surE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE
YP_003657195.1	KEGG: abu:Abu_2264 hypothetical protein; SPTR: A8EX04 Putative uncharacterized protein
YP_003657196.1	KEGG: cff:CFF8240_0214 hypothetical protein; SPTR: B6BLV6 Putative uncharacterized protein
YP_003657197.1	InterPro IPR020281; KEGG: abu:Abu_2265 hypothetical protein; SPTR: A8EX05 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF493)
YP_003657198.1	COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: tdn:Suden_2020 molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; SPTR: B6BGP7 Molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_003657199.1	InterPro IPR001911:IPR018278; KEGG: abu:Abu_2267 30S ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: A8EX07 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21
YP_003657200.1	COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR000883; KEGG: abu:Abu_2081 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: A8EWH5 Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I
YP_003657201.1	COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468:IPR009056; KEGG: abu:Abu_2080 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: A8EWH4 Cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II
YP_003657202.1	InterPro IPR014107; KEGG: abu:Abu_2079 cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cytochrome c oxidase cbb3-type CcoQ; SPTR: A8EWH3 Cytochrome c oxidase, cbb3-type, subunit IV; PFAM: Cbb3-type cytochrome oxidase component FixQ; TIGRFAM: cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial
YP_003657204.1	COGs: COG0670 Integral membrane protein interacts with FtsH; InterPro IPR006214; KEGG: abu:Abu_2273 hypothetical protein; PFAM: protein of unknown function UPF0005; SPTR: A8EX08 Conserved hypothetical integral membrane protein; PFAM: Uncharacterised protein family UPF0005
YP_003657205.1	KEGG: abu:Abu_2274 hypothetical protein; SPTR: A8EX09 Putative uncharacterized protein
YP_003657206.1	InterPro IPR013217; KEGG: abu:Abu_2275 putative methyltransferase; PFAM: Methyltransferase type 12; SPTR: A8EX10 Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_003657207.1	COGs: COG1314 Preprotein translocase subunit SecG; InterPro IPR004692; KEGG: abu:Abu_2276 protein-export membrane protein SecG; PFAM: Preprotein translocase SecG subunit; SPTR: A8EX11 Protein-export membrane protein SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_003657208.1	COGs: COG0233 Ribosome recycling factor; InterPro IPR002661; KEGG: abu:Abu_2277 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: A8EX12 Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_003657209.1	COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR006273:IPR000836; KEGG: abu:Abu_2278 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: A8EX13 Orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; orotate phosphoribosyltransferase
YP_003657210.1	InterPro IPR010432; KEGG: abu:Abu_2279 hypothetical protein; PFAM: RDD domain containing protein; SPTR: A8EX14 Putative uncharacterized protein; PFAM: RDD family
YP_003657211.1	InterPro IPR016196:IPR011701; KEGG: abu:Abu_2280 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A8EX15 Putative major facilitator superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003657212.1	COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: tdn:Suden_0909 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: Q30S44 Diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003657213.1	COGs: COG3022 conserved hypothetical protein; InterPro IPR005583; KEGG: abu:Abu_2282 hypothetical protein; PFAM: protein of unknown function DUF328; SPTR: A8EX17 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF328)
YP_003657214.1	COGs: COG3012 conserved hypothetical protein; KEGG: abu:Abu_1170 hypothetical protein; SPTR: A8EU06 Putative uncharacterized protein; PFAM: SEC-C motif
YP_003657215.1	KEGG: abu:Abu_0959 hypothetical protein; SPTR: A8ETE5 Putative uncharacterized protein
YP_003657216.1	KEGG: pmo:Pmob_0456 hypothetical protein; SPTR: A9BFM2 Putative uncharacterized protein
YP_003657217.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: dal:Dalk_4422 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C8QW83 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_003657218.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR016162:IPR015590; KEGG: abu:Abu_2148 aldehyde dehydrogenase family protein; PFAM: Aldehyde Dehydrogenase; SPTR: A8EWN9 Aldehyde dehydrogenase family protein; PFAM: Aldehyde dehydrogenase family
YP_003657219.1	COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766; KEGG: abu:Abu_2149 acetolactate synthase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; SPTR: A8EWP0 Acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003657220.1	COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834; KEGG: abu:Abu_2153 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: A8EWP4 Phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_003657221.1	KEGG: dal:Dalk_0467 hypothetical protein; SPTR: B6BH91 Putative uncharacterized protein
YP_003657222.1	KEGG: abu:Abu_2158 hypothetical protein; SPTR: A8EWP9 Putative uncharacterized protein
YP_003657223.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR001638; KEGG: mmw:Mmwyl1_1889 diguanylate cyclase; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; extracellular solute-binding protein family 3; SPTR: A6VWI4 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003657224.1	COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR011008:IPR007138; KEGG: dsa:Desal_0918 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q2BHQ5 Putative uncharacterized protein (Fragment); PFAM: Antibiotic biosynthesis monooxygenase
YP_003657225.1	KEGG: hypothetical protein; SPTR: Q8IL39 Putative uncharacterized protein
YP_003657226.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR004552:IPR002123; KEGG: tdn:Suden_0310 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Q30TU0 Phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003657227.1	InterPro IPR008201; KEGG: nis:NIS_0575 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: C2A0W2 Uncharacterized conserved protein; PFAM: Protein of unknown function DUF86
YP_003657228.1	COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: dth:DICTH_1832 nucleotidyltransferase; PFAM: DNA polymerase beta domain protein region; SPTR: C2A0W1 Predicted nucleotidyltransferase; PFAM: Nucleotidyltransferase domain
YP_003657229.1	KEGG: hypothetical protein; SPTR: A8UTP8 Putative uncharacterized protein
YP_003657230.1	KEGG: cdl:CDR20291_1475 putative membrane-associated ribonuclease; SPTR: Q186D2 Putative membrane-associated ribonuclease
YP_003657231.1	KEGG: fba:FIC_02416 molybdopterin oxidoreductase; SPTR: B9CR64 ABC transporter, permease protein
YP_003657232.1	COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: abu:Abu_2167 HI0933-like protein; PFAM: HI0933 family protein; SPTR: A8EWQ8 HI0933-like protein; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275
YP_003657233.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR003593:IPR011704; KEGG: sun:SUN_1058 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: A6Q956 Putative uncharacterized protein; PFAM: AAA domain (dynein-related subfamily)
YP_003657234.1	COGs: COG3864 conserved hypothetical protein; InterPro IPR018698; KEGG: sun:SUN_1504 hypothetical protein; PFAM: Protein of unknown function DUF2201, metallopeptidase-related; SPTR: A6QAE6 Putative uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201)
YP_003657235.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: ypi:YpsIP31758_3586 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: C1ZZC5 RND family efflux transporter, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_003657236.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: mmw:Mmwyl1_0997 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: acriflavin resistance protein; SPTR: A6VTZ9 Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_003657237.1	COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: yen:YE0445 outer membrane efflux lipoprotein; PFAM: outer membrane efflux protein; SPTR: C1ZZC7 Efflux transporter, outer membrane factor lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_003657238.1	InterPro IPR011051; KEGG: abu:Abu_2168 hypothetical protein; SPTR: A8EWQ9 Putative uncharacterized protein; PFAM: Cupin domain
YP_003657239.1	COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterProIPR006235:IPR000277:IPR015424:IPR015421:IPR 015422; KEGG: abu:Abu_2169 O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: O-acetylhomoserine aminocarboxypropyltransferase; SPTR: A8EWR0 O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase
YP_003657240.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: abu:Abu_2170 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: A8EWR1 Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator)
YP_003657241.1	COGs: COG0031 Cysteine synthase; InterPro IPR005856:IPR005859:IPR001216:IPR001926; KEGG: abu:Abu_2299 cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A8EWR2 Cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_003657242.1	InterPro IPR018638; KEGG: abu:Abu_2172 hypothetical protein; PFAM: Protein of unknown function DUF2061, membrane; SPTR: A8EWR3 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2061)
YP_003657243.1	COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR004511:IPR011798:IPR014729:IPR002500; KEGG: abu:Abu_2173 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; PRIAM: Phosphoadenylyl-sulfate reductase (thioredoxin); SPTR: A8EWR4 Phosphoadenosine phosphosulfate reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin)
YP_003657244.1	COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR011784:IPR014729:IPR002500; KEGG: sun:SUN_1722 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: B6BKH1 Sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit
YP_003657245.1	COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterProIPR005225:IPR011779:IPR000795:IPR009001:IPR 009000; KEGG: sun:SUN_1721 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; PRIAM: Sulfate adenylyltransferase; SPTR: B6BKH2 Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain
YP_003657246.1	COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR006066:IPR005117:IPR006067; KEGG: tdn:Suden_0159 ferredoxin--nitrite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Sulfite reductase (ferredoxin); SPTR: B6BNF4 Sulfite reductase; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain
YP_003657247.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR015424:IPR015421:IPR000192; KEGG: abu:Abu_2178 aminotransferase, NifS-like protein; PFAM: aminotransferase class V; SPTR: A8EWR9 Aminotransferase, NifS-like protein; PFAM: Aminotransferase class-V
YP_003657248.1	COGs: COG3211 phosphatase; InterPro IPR008557; KEGG: cha:CHAB381_0225 alkaline phosphatase; PFAM: protein of unknown function DUF839; SPTR: A7HZZ1 Alkaline phosphatase; PFAM: Bacterial protein of unknown function (DUF839)
YP_003657249.1	COGs: COG4222 conserved hypothetical protein; KEGG: hna:Hneap_2391 hypothetical protein; SPTR: A7C1S5 Putative uncharacterized protein
YP_003657250.1	KEGG: cha:CHAB381_0226 hypothetical protein; SPTR: C2A1T8 Putative uncharacterized protein
YP_003657251.1	COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: abu:Abu_2285 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: B6BLF3 Integral membrane protein; PFAM: Calcineurin-like phosphoesterase
YP_003657252.1	InterPro IPR000014:IPR013655; KEGG: abu:Abu_0847 methyl-accepting chemotaxis protein; PFAM: PAS fold-3 domain protein; SMART: PAS domain containing protein; SPTR: A8ET33 Methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box
YP_003657253.1	COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089:IPR013587; KEGG: abu:Abu_1487 methyl-accepting chemotaxis protein; PFAM: Nitrate and nitrite sensing domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: A8EUW8 Methyl-accepting chemotaxis protein; PFAM: Nitrate and nitrite sensing; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_003657254.1	COGs: COG4196 conserved hypothetical protein; InterPro IPR002931:IPR013589:IPR018667; KEGG: ftn:FTN_0034 hypothetical protein; PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: A7JPB3 Putative uncharacterized protein; PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily; Putative amidoligase enzyme (DUF2126)
YP_003657255.1	COGs: COG2308 conserved hypothetical protein; InterPro IPR007297:IPR007302:IPR007296; KEGG: abu:Abu_2294 hypothetical protein; PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; SPTR: A8EX29 Putative uncharacterized protein; PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF404); Domain of unknown function (DUF407)
YP_003657256.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931:IPR013589; KEGG: abu:Abu_2295 hypothetical protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: A8EX30 Putative uncharacterized protein; PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily
YP_003657257.1	KEGG: abu:Abu_2306 hypothetical protein; SPTR: A8EX41 Putative uncharacterized protein; PFAM: Bacterial domain of unknown function (DUF403)
YP_003657258.1	COGs: COG2308 conserved hypothetical protein; InterPro IPR016450:IPR007297:IPR007302; KEGG: abu:Abu_2307 hypothetical protein; PFAM: protein of unknown function DUF404; protein of unknown function DUF407; SPTR: A8EX42 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407)
YP_003657260.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068:IPR008978; KEGG: abu:Abu_2289 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: A8EX24 Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family
YP_003657261.1	COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR005467:IPR003660:IPR003594:IPR 004358; KEGG: mag:amb1111 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SPTR: Q2W8B0 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box
YP_003657262.1	KEGG: dal:Dalk_5201 hypothetical protein; SPTR: B8FE90 Putative uncharacterized protein; PFAM: ABC transporter substrate binding protein
YP_003657264.1	COGs: COG1217 membrane GTPase involved in stress response; InterProIPR005225:IPR006298:IPR013838:IPR000795:IPR 009022:IPR009000:IPR000640:IPR004161; KEGG: abu:Abu_2308 GTP-binding elongation factor family protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SPTR: A8EX43 GTP-binding elongation factor family protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_003657265.1	InterPro IPR001455; KEGG: abu:Abu_2310 hypothetical protein; PFAM: SirA family protein; SPTR: A8EX45 Putative uncharacterized protein; PFAM: SirA-like protein
YP_003657266.1	COGs: COG2066 Glutaminase; InterPro IPR012338:IPR015868; KEGG: abu:Abu_2331 glutaminase A; PFAM: Glutaminase, core; PRIAM: Glutaminase; SPTR: A8EX66 Glutaminase; PFAM: Glutaminase
YP_003657267.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR003594:IPR011623; KEGG: tdn:Suden_0750 histidine kinase; PFAM: ATP-binding region ATPase domain protein; Diverse 7TM receptor transmembrane region; SPTR: Q30SK2 Sensor protein; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2
YP_003657268.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR016032:IPR011991; KEGG: abu:Abu_1037 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8ETM3 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003657269.1	InterPro IPR008638:IPR016160:IPR011050; KEGG: tdn:Suden_0748 filamentous haemagglutinin-like; PFAM: filamentous haemagglutinin domain protein; SPTR: Q30SK4 Filamentous haemagglutinin-like protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: haemagglutination activity domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; filamentous haemagglutinin family N-terminal domain
YP_003657270.1	COGs: COG2831 Hemolysin activation/secretion protein; InterPro IPR013686; KEGG: tdn:Suden_1007 hemolysin activation/secretion protein-like; PFAM: Polypeptide-transport-associated domain protein ShlB-type; SPTR: Q30RU6 Hemolysin activation/secretion protein-like protein; PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type
YP_003657271.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR003594:IPR011623; KEGG: tdn:Suden_0750 histidine kinase; PFAM: ATP-binding region ATPase domain protein; Diverse 7TM receptor transmembrane region; SMART: ATP-binding region ATPase domain protein; SPTR: Q30SK2 Sensor protein; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2
YP_003657272.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1037 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q30SK3 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain
YP_003657273.1	InterPro IPR019734:IPR013026:IPR011990:IPR013105; KEGG: abu:Abu_0929 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: A8ETB5 Putative uncharacterized protein
YP_003657274.1	KEGG: abu:Abu_0930 hypothetical protein; SPTR: A8ETB6 Putative uncharacterized protein; PFAM: FecR protein
YP_003657275.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: abu:Abu_0441 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: A8ERZ2 ABC transporter, permease protein; PFAM: Predicted permease
YP_003657276.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: abu:Abu_0440 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ERZ1 ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_003657277.1	KEGG: abu:Abu_0439 hypothetical protein; SPTR: A8ERZ0 Putative uncharacterized protein
YP_003657278.1	KEGG: abu:Abu_0438 hypothetical protein; SPTR: A8ERY9 Putative uncharacterized protein
YP_003657279.1	InterPro IPR007372; KEGG: abu:Abu_0437 putative periplasmic protein; PFAM: YceI family protein; SPTR: A8ERY8 Hypothetical periplasmic protein; PFAM: YceI-like domain
YP_003657280.1	KEGG: abu:Abu_0436 hypothetical protein; SPTR: A8ERY7 Putative uncharacterized protein
YP_003657281.1	COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: abu:Abu_0435 Ser/Thr protein phosphatase family protein; PFAM: metallophosphoesterase; SPTR: A8ERY6 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase
YP_003657282.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR011991:IPR001867; KEGG: abu:Abu_0434 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8ERY5 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003657283.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003661:IPR003594:IPR009082:IPR 004358:IPR003660; KEGG: abu:Abu_0433 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ERY4 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003657284.1	COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR018045:IPR002645:IPR011547; KEGG: abu:Abu_1286 sulfate permease; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: A8EUB9 Sulfate permease; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1
YP_003657285.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR014729:IPR006015:IPR006016; KEGG: abu:Abu_1287 universal stress protein; PFAM: UspA domain protein; SPTR: A8EUC0 Universal stress protein; PFAM: Universal stress protein family
YP_003657286.1	COGs: COG2194 membrane-associated metal-dependent hydrolase; InterPro IPR017850:IPR012549:IPR000917; KEGG: abu:Abu_2318 sulfatase; PFAM: sulfatase; protein of unknown function DUF1705; SPTR: A8EX53 Sulfatase; PFAM: Sulfatase; Domain of unknown function (DUF1705)
YP_003657287.1	COGs: COG3907 PAP2 (acid phosphatase) superfamily protein; InterPro IPR000326; KEGG: abu:Abu_2319 PAP2 superfamily protein; PFAM: phosphoesterase PA-phosphatase related; SPTR: A8EX54 PAP2 superfamily protein; PFAM: PAP2 superfamily
YP_003657288.1	COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: tdn:Suden_0318 diacylglycerol kinase; PFAM: diacylglycerol kinase; SPTR: Q30TT2 Diacylglycerol kinase; PFAM: Prokaryotic diacylglycerol kinase
YP_003657289.1	InterPro IPR009056:IPR015170; KEGG: abu:Abu_2320 cytochrome c-type protein, putative; PFAM: Domain of unknown function DUF1924; SPTR: A8EX55 Cytochrome c-type protein, putative; PFAM: Domain of unknown function (DUF1924)
YP_003657290.1	InterPro IPR018588; KEGG: abu:Abu_2321 diheme cytochrome c precursor, putative; PFAM: Dihaem cytochrome c; SPTR: A8EX56 Diheme cytochrome c, putative; PFAM: Dihaem cytochrome c
YP_003657291.1	COGs: COG3658 Cytochrome b; InterPro IPR016174:IPR011577; KEGG: abu:Abu_2322 cytochrome b, putative; PFAM: cytochrome B561; SPTR: A8EX57 Cytochrome b, putative; PFAM: Cytochrome b(N-terminal)/b6/petB
YP_003657292.1	InterPro IPR018588; KEGG: abu:Abu_2323 hypothetical protein; PFAM: Dihaem cytochrome c; SPTR: A8EX58 Putative uncharacterized protein; PFAM: Dihaem cytochrome c
YP_003657293.1	KEGG: abu:Abu_2324 hypothetical protein; SPTR: A8EX59 Putative uncharacterized protein
YP_003657294.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_2325 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A8EX60 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003657295.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR003660:IPR003594:IPR009082; KEGG: abu:Abu_2326 two-component sensor histidine kinase; PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; SPTR: A8EX61 Two-component sensor histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003657296.1	COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: abu:Abu_2332 hypothetical protein; PFAM: protein of unknown function UPF0126; SPTR: A8EX67 Conserved hypothetical membrane protein; PFAM: UPF0126 domain
YP_003657297.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dps:DP1552 hypothetical protein; PFAM: GGDEF domain containing protein; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; SPTR: Q6AMZ3 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003657298.1	COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: abu:Abu_1359 inhibitor of MCP methylation, CheC; PFAM: CheC domain protein; SPTR: A8EUJ1 Inhibitor of MCP methylation, CheC; PFAM: CheC-like family
YP_003657299.1	COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR001789:IPR011006; KEGG: abu:Abu_1358 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A8EUJ0 Response regulator receiver domain protein, CheY-like; PFAM: Response regulator receiver domain
YP_003657300.1	COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR001555:IPR002376; KEGG: abu:Abu_2334 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: A8EX69 Phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_003657301.1	InterPro IPR000620; KEGG: bch:Bcen2424_3207 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A3YF08 Putative integral membrane protein; PFAM: EamA-like transporter family
YP_003657302.1	COGs: COG0817 Holliday junction resolvasome endonuclease subunit; InterPro IPR002176:IPR020563:IPR012337; KEGG: abu:Abu_2335 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: A8EX70 Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC