-- dump date 20140618_204000 -- class Genbank::CDS -- table cds_note -- id note YP_001377205.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: ade:Adeh_0001 chromosomal replication initiator protein DnaA YP_001377206.1 TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; KEGG: ade:Adeh_0002 DNA polymerase III, beta subunit YP_001377207.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: ade:Adeh_0003 DNA replication and repair protein RecF YP_001377208.1 KEGG: ade:Adeh_0004 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_001377209.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: ade:Adeh_0005 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001377210.1 PFAM: peptidase zinc-dependent; KEGG: ade:Adeh_0006 Zn-dependent protease YP_001377211.1 KEGG: ade:Adeh_0007 hypothetical protein YP_001377212.1 PFAM: alpha/beta hydrolase fold; KEGG: jan:Jann_2625 alpha/beta hydrolase YP_001377213.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ade:Adeh_0008 hypothetical protein YP_001377214.1 KEGG: ade:Adeh_0009 hypothetical protein YP_001377215.1 PFAM: DSBA oxidoreductase; KEGG: ade:Adeh_0010 DsbA oxidoreductase YP_001377216.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: ade:Adeh_0011 S6 modification enzyme RimK YP_001377217.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: ade:Adeh_0012 isoleucyl-tRNA synthetase YP_001377218.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_001377219.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: ade:Adeh_0014 prolipoprotein diacylglyceryl transferase YP_001377220.1 KEGG: ade:Adeh_0015 hypothetical protein YP_001377221.1 KEGG: ade:Adeh_0016 hypothetical protein YP_001377223.1 PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: ade:Adeh_3747 outer membrane protein, OmpA/MotB family YP_001377224.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mlo:mll6700 hypothetical protein YP_001377226.1 KEGG: lil:LA0092 sensory transduction histidine kinase YP_001377227.1 KEGG: sme:SMb20452 hypothetical protein YP_001377228.1 PFAM: helix-turn-helix domain protein; KEGG: ade:Adeh_2436 transcriptional regulator, XRE family YP_001377229.1 KEGG: ade:Adeh_2435 putative transcriptional regulator, fis family YP_001377230.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: chu:CHU_2794 hypothetical protein YP_001377231.1 KEGG: ade:Adeh_3529 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001377232.1 PFAM: aldo/keto reductase; KEGG: pol:Bpro_2819 aldo/keto reductase YP_001377233.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_0532 putative transporter YP_001377234.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_0336 sensory box histidine kinase/response regulator YP_001377235.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_0292 drug resistance transporter, EmrB/QacA family YP_001377236.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_0031 short-chain dehydrogenase/reductase SDR YP_001377237.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: ade:Adeh_0032 membrane protein YP_001377238.1 KEGG: ade:Adeh_0033 hypothetical protein YP_001377239.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: azo:azo0467 probable long-chain fatty acid transport protein YP_001377240.1 PFAM: Na+ symporter; KEGG: ade:Adeh_0034 Na+/solute symporter YP_001377241.1 KEGG: ade:Adeh_0035 hypothetical protein YP_001377243.1 KEGG: ade:Adeh_0036 phenylacetate--CoA ligase YP_001377244.1 PFAM: amino acid-binding ACT domain protein; KEGG: ade:Adeh_0037 amino acid-binding ACT YP_001377245.1 KEGG: ade:Adeh_0038 phenylacetate--CoA ligase YP_001377246.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: ade:Adeh_0039 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001377247.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: ade:Adeh_0040 indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_001377248.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: ade:Adeh_0041 phosphate butyryltransferase YP_001377249.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_001377250.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: ade:Adeh_0027 NAD-dependent epimerase/dehydratase YP_001377251.1 KEGG: ade:Adeh_0046 hypothetical protein YP_001377252.1 KEGG: ade:Adeh_0047 hypothetical protein YP_001377253.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ade:Adeh_0048 electron transfer flavoprotein beta-subunit YP_001377254.1 KEGG: ade:Adeh_0049 electron transfer flavoprotein alpha and beta subunits YP_001377255.1 PFAM: beta-lactamase domain protein; KEGG: ade:Adeh_0050 beta-lactamase-like YP_001377256.1 PFAM: Integral membrane protein TerC; KEGG: ade:Adeh_0051 integral membrane protein TerC YP_001377257.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_0052 protein of unknown function DUF6, transmembrane YP_001377258.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_4095 glycosyl transferase, group 1 YP_001377259.1 PFAM: MltA domain protein; 3D domain protein; KEGG: ade:Adeh_0053 membrane-bound lytic murein transglycosylase YP_001377260.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ade:Adeh_0054 uracil-xanthine permease YP_001377261.1 KEGG: ade:Adeh_0055 putative mRNA 3'-end processing factor YP_001377262.1 PFAM: O-methyltransferase family 3; KEGG: ade:Adeh_3725 O-methyltransferase, family 3 YP_001377263.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ade:Adeh_0056 pseudouridine synthase, RluD YP_001377264.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: ade:Adeh_0057 penicillin-binding protein 1A YP_001377265.1 PFAM: protein of unknown function DUF55; KEGG: ade:Adeh_0059 protein of unknown function DUF589 YP_001377266.1 PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ade:Adeh_0060 sec-independent translocation protein MttA/Hcf106 YP_001377267.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: ade:Adeh_0061 sec-independent protein translocase TatC YP_001377268.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_001377269.1 KEGG: ade:Adeh_0063 hypothetical protein YP_001377270.1 PFAM: Rhomboid family protein; KEGG: ade:Adeh_0064 rhomboid-like protein YP_001377271.1 KEGG: ade:Adeh_0065 hypothetical protein YP_001377272.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_0066 radical SAM YP_001377273.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ade:Adeh_0068 lipolytic enzyme, G-D-S-L YP_001377274.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: ade:Adeh_0069 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001377275.1 TIGRFAM: dethiobiotin synthase; KEGG: ade:Adeh_0070 dethiobiotin synthase YP_001377276.1 KEGG: ade:Adeh_0072 hypothetical protein YP_001377277.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ade:Adeh_0073 peptidase S1 and S6, chymotrypsin/Hap YP_001377278.1 KEGG: ade:Adeh_0074 hypothetical protein YP_001377279.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate YP_001377280.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: ade:Adeh_0076 peptidase C26 YP_001377281.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: ade:Adeh_0077 phosphomethylpyrimidine kinase YP_001377282.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: ade:Adeh_0079 replicative DNA helicase YP_001377283.1 SMART: Water Stress and Hypersensitive response domain protein; KEGG: ade:Adeh_0080 hypothetical protein YP_001377284.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; KEGG: ade:Adeh_3944 magnesium transporter YP_001377285.1 PFAM: peptidase M16 domain protein; KEGG: mxa:MXAN_1623 peptidase, M16 (pitrilysin) family YP_001377286.1 PFAM: peptidase M16 domain protein; KEGG: mxa:MXAN_1624 peptidase, M16 (pitrilysin) family YP_001377287.1 KEGG: mxa:MXAN_0716 hypothetical protein YP_001377288.1 KEGG: mxa:MXAN_0717 hypothetical protein YP_001377289.1 KEGG: mxa:MXAN_0718 hypothetical protein YP_001377290.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: ade:Adeh_3091 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001377291.1 TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG: ade:Adeh_0085 5-methyltetrahydrofolate--homocysteine methyltransferase YP_001377292.1 PFAM: Radical SAM domain protein; KEGG: ade:Adeh_0086 radical SAM YP_001377293.1 KEGG: ade:Adeh_0087 hypothetical protein YP_001377294.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: ade:Adeh_0088 outer membrane lipoprotein carrier protein LolA YP_001377295.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: ade:Adeh_0089 protein of unknown function DUF853, NPT hydrolase putative YP_001377296.1 PFAM: glycosyl transferase family 2; KEGG: mxa:MXAN_5335 glycosyl transferase, group 2 family protein YP_001377297.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bch:Bcen2424_1485 hypothetical protein YP_001377298.1 KEGG: ade:Adeh_0093 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_001377299.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_001377300.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: ade:Adeh_0095 beta-lactamase-like protein YP_001377301.1 KEGG: ade:Adeh_0096 hypothetical protein YP_001377302.1 PFAM: UvrD/REP helicase; KEGG: ade:Adeh_0097 UvrD/REP helicase YP_001377303.1 PFAM: Spore coat protein CotH; KEGG: ade:Adeh_3317 spore coat assembly protein-like YP_001377304.1 TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; KEGG: ade:Adeh_0098 adenosine deaminase YP_001377305.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_001377306.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0101 response regulator receiver domain protein (CheY-like) YP_001377307.1 KEGG: ade:Adeh_0994 hypothetical protein YP_001377308.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1782 PAS/PAC sensor signal transduction histidine kinase YP_001377309.1 KEGG: ade:Adeh_0104 hypothetical protein YP_001377310.1 PFAM: Antibiotic biosynthesis monooxygenase; Stress responsive alpha-beta barrel domain protein; KEGG: cte:CT1263 hypothetical protein YP_001377311.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_0105 GCN5-related N-acetyltransferase YP_001377312.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0106 two component, sigma54 specific, transcriptional regulator, fis family YP_001377313.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0107 periplasmic sensor signal transduction histidine kinase YP_001377314.1 KEGG: ade:Adeh_0108 hypothetical protein YP_001377315.1 KEGG: ade:Adeh_0109 hypothetical protein YP_001377316.1 KEGG: ade:Adeh_0110 hypothetical protein YP_001377317.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: ade:Adeh_0111 peptidase M14, carboxypeptidase A YP_001377318.1 KEGG: pin:Ping_0445 membrane protein involved in colicin uptake-like protein YP_001377319.1 functions in MreBCD complex in some organisms YP_001377320.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; KEGG: ade:Adeh_0114 peptidase S9, prolyl oligopeptidase YP_001377321.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_0115 serine/threonine protein kinase YP_001377322.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_001377323.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_001377324.1 PFAM: ribosomal protein S6; KEGG: ade:Adeh_0118 ribosomal protein S6 YP_001377325.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_001377326.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_001377327.1 TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: ade:Adeh_0121 ribose-phosphate pyrophosphokinase YP_001377328.1 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus YP_001377329.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: ade:Adeh_0123 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_001377330.1 KEGG: ade:Adeh_0124 hypothetical protein YP_001377331.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mxa:MXAN_5988 thermostable carboxypeptidase 1 YP_001377332.1 KEGG: ade:Adeh_0126 hypothetical protein YP_001377333.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: ade:Adeh_0127 hypoxanthine phosphoribosyltransferase YP_001377334.1 KEGG: ade:Adeh_0128 hypothetical protein YP_001377335.1 PFAM: Methyltransferase type 11; KEGG: ade:Adeh_0129 methyltransferase type 11 YP_001377336.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_0130 hypothetical protein YP_001377337.1 PFAM: glycoside hydrolase family 57; KEGG: ade:Adeh_0131 glycoside hydrolase, family 57 YP_001377338.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; KEGG: ade:Adeh_0132 diguanylate cyclase (GGDEF domain) YP_001377339.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_0133 major facilitator superfamily MFS_1 transporter YP_001377340.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: ade:Adeh_0134 galactose-1-phosphate uridylyltransferase YP_001377341.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: ade:Adeh_0135 glycogen/starch synthase, ADP-glucose type YP_001377342.1 KEGG: ade:Adeh_0136 hypothetical protein YP_001377343.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0137 hypothetical protein YP_001377344.1 KEGG: ade:Adeh_0138 hypothetical protein YP_001377345.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: ade:Adeh_0139 glycine oxidase ThiO YP_001377346.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_0140 transcriptional regulator, TetR family YP_001377347.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: ade:Adeh_0141 DNA-directed DNA polymerase YP_001377348.1 KEGG: ade:Adeh_1681 PE-PGRS family protein YP_001377349.1 KEGG: ade:Adeh_0142 hypothetical protein YP_001377350.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_0143 metallophosphoesterase YP_001377351.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0144 response regulator receiver domain protein (CheY-like) YP_001377352.1 PFAM: phosphoesterase DHHA1; KEGG: ade:Adeh_0145 phosphoesterase, DHHA1 YP_001377353.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_001377354.1 PFAM: uncharacterised P-loop ATPase protein UPF0042; KEGG: ade:Adeh_0147 uncharacterised P-loop ATPase protein UPF0042 YP_001377355.1 PFAM: PTS system fructose subfamily IIA component; KEGG: ade:Adeh_0148 phosphotransferase system, fructose subfamily IIA component YP_001377356.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: ade:Adeh_0149 phosphotransferase system, sorbose subfamily IIB component YP_001377357.1 KEGG: ade:Adeh_0150 hypothetical protein YP_001377358.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: ade:Adeh_0151 phosphotransferase system, mannose/fructose/sorbose family IID component YP_001377359.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: ade:Adeh_0152 HPrNtr YP_001377360.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: ade:Adeh_0153 phosphoenolpyruvate-protein phosphotransferase YP_001377361.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_001377362.1 PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0155 transcriptional regulator, ArsR family YP_001377363.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_001377364.1 KEGG: ade:Adeh_3781 LigA YP_001377365.1 TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; KEGG: ade:Adeh_0157 undecaprenol kinase YP_001377366.1 PFAM: NUDIX hydrolase; KEGG: ade:Adeh_0158 NUDIX hydrolase YP_001377367.1 PFAM: Nucleotidyl transferase; KEGG: ade:Adeh_0159 mannose-1-phosphate guanylyltransferase (GDP) YP_001377368.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: ade:Adeh_0160 phosphomannomutase YP_001377369.1 PFAM: ROK family protein; KEGG: ade:Adeh_0161 ROK YP_001377370.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mxa:MXAN_6485 ferric siderophore transporter, periplasmic energy transduction protein TonB YP_001377371.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mxa:MXAN_6484 transport energizing protein, ExbD/TolR family YP_001377372.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mxa:MXAN_0818 MotA/TolQ/ExbB proton channel family protein YP_001377373.1 PFAM: protein of unknown function DUF814; KEGG: ade:Adeh_0162 hypothetical protein YP_001377374.1 KEGG: ade:Adeh_0163 hypothetical protein YP_001377375.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ade:Adeh_0164 surface antigen variable number YP_001377376.1 PFAM: protein of unknown function DUF490; KEGG: ade:Adeh_0165 protein of unknown function DUF490 YP_001377377.1 KEGG: ade:Adeh_0166 integral membrane protein-like YP_001377378.1 PFAM: SNARE associated Golgi protein; KEGG: ade:Adeh_0167 DedA YP_001377379.1 KEGG: ade:Adeh_0168 transglutaminase-like YP_001377380.1 KEGG: mxa:MXAN_2741 hypothetical protein YP_001377381.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ade:Adeh_0170 glutamate carboxypeptidase YP_001377382.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: ade:Adeh_0171 N-acetyl-gamma-glutamyl-phosphate reductase YP_001377383.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: ade:Adeh_0172 acetylglutamate kinase YP_001377384.1 PFAM: Radical SAM domain protein; KEGG: sus:Acid_4473 radical SAM domain protein YP_001377385.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sus:Acid_5929 radical SAM domain protein YP_001377386.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: sat:SYN_00884 outer membrane lipoprotein carrier protein YP_001377387.1 PFAM: SNARE associated Golgi protein YP_001377388.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rxy:Rxyl_0848 ABC transporter related YP_001377389.1 PFAM: protein of unknown function DUF214; KEGG: aba:Acid345_0559 ABC efflux pump, inner membrane subunit YP_001377391.1 TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: ade:Adeh_3814 CoA enzyme activase YP_001377392.1 KEGG: ade:Adeh_3425 mucin-associated surface protein (MASP), putative YP_001377393.1 PFAM: GTP-binding protein HSR1-related; TGS domain protein; KEGG: ade:Adeh_2114 GTP-binding protein, HSR1-related YP_001377394.1 PFAM: sulfatase; KEGG: ade:Adeh_0174 sulfatase YP_001377395.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro00217 hypothetical protein YP_001377396.1 KEGG: ade:Adeh_0177 hypothetical protein YP_001377397.1 PFAM: arginine N-succinyltransferase beta subunit; KEGG: ade:Adeh_0178 arginine N-succinyltransferase YP_001377398.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_001377399.1 PFAM: histidine triad (HIT) protein; KEGG: ade:Adeh_0180 histidine triad (HIT) protein YP_001377400.1 KEGG: pin:Ping_0445 membrane protein involved in colicin uptake-like protein YP_001377401.1 PFAM: HpcH/HpaI aldolase; KEGG: ade:Adeh_0181 citryl-CoA lyase YP_001377403.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: ade:Adeh_0182 chorismate mutase YP_001377404.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: tte:TTE1013 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001377405.1 PFAM: Prephenate dehydrogenase; KEGG: ade:Adeh_0183 prephenate dehydrogenase YP_001377406.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_001377407.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: ade:Adeh_0185 shikimate 5-dehydrogenase YP_001377408.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001377409.1 PFAM: shikimate kinase; KEGG: ade:Adeh_0187 shikimate kinase YP_001377410.1 PFAM: 3-dehydroquinate synthase; KEGG: ade:Adeh_0188 3-dehydroquinate synthase YP_001377411.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001377412.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_0190 glycosyl transferase, family 2 YP_001377413.1 KEGG: ade:Adeh_0193 hypothetical protein YP_001377414.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ade:Adeh_0195 pseudouridine synthase, RluD YP_001377415.1 TIGRFAM: putative regulatory protein, FmdB family; KEGG: ade:Adeh_0196 hypothetical protein YP_001377416.1 KEGG: ade:Adeh_0197 hypothetical protein YP_001377417.1 KEGG: ade:Adeh_0198 hypothetical protein YP_001377418.1 PFAM: CoA-binding domain protein; KEGG: ade:Adeh_0199 CoA-binding protein YP_001377419.1 KEGG: ade:Adeh_0202 hypothetical protein YP_001377420.1 PFAM: GTP-binding protein HSR1-related; KEGG: ade:Adeh_0203 GTP-binding protein, HSR1-related YP_001377421.1 KEGG: ade:Adeh_2659 hypothetical protein YP_001377422.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nha:Nham_3915 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001377423.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ade:Adeh_0206 major facilitator superfamily transporter YP_001377424.1 KEGG: ade:Adeh_0207 hypothetical protein YP_001377425.1 KEGG: sus:Acid_1246 hypothetical protein YP_001377426.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ade:Adeh_0208 lysine exporter protein (LysE/YggA) YP_001377427.1 KEGG: ade:Adeh_0067 hypothetical protein YP_001377428.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: ade:Adeh_0211 glutamate 5-kinase YP_001377429.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_001377430.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: ade:Adeh_0213 iojap-related protein YP_001377431.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_0215 multihaem cytochrome YP_001377432.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_0216 protein of unknown function DUF6, transmembrane YP_001377433.1 KEGG: ade:Adeh_0201 hypothetical protein YP_001377435.1 PFAM: protein of unknown function DUF86; KEGG: cya:CYA_0899 hypothetical protein YP_001377436.1 KEGG: ade:Adeh_3906 hypothetical protein YP_001377437.1 PFAM: protein kinase; tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: ade:Adeh_0217 serine/threonine protein kinase YP_001377438.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: ade:Adeh_0218 pyruvate-ferredoxin (flavodoxin) oxidoreductase YP_001377439.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ade:Adeh_0225 secretion protein HlyD YP_001377440.1 PFAM: acriflavin resistance protein; KEGG: ade:Adeh_0226 acriflavin resistance protein YP_001377441.1 PFAM: FAD dependent oxidoreductase; KEGG: ade:Adeh_0229 FAD dependent oxidoreductase YP_001377442.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_2406 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001377443.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: ade:Adeh_2405 Rieske Fe-S protein YP_001377444.1 PFAM: Cytochrome b/b6 domain; KEGG: ade:Adeh_2404 cytochrome b/b6-like YP_001377445.1 KEGG: ade:Adeh_2403 hypothetical protein YP_001377446.1 PFAM: cytochrome c oxidase subunit II; KEGG: ade:Adeh_2402 nitrous-oxide reductase YP_001377447.1 KEGG: ade:Adeh_2401 hypothetical protein YP_001377448.1 SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: ade:Adeh_2400 periplasmic copper-binding, NosD YP_001377449.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2399 ABC transporter, ATPase subunit YP_001377450.1 KEGG: ade:Adeh_2398 hypothetical protein YP_001377451.1 KEGG: ade:Adeh_2397 hypothetical protein YP_001377452.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001377453.1 KEGG: ade:Adeh_0231 Fe-S oxidoreductase YP_001377454.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dde:Dde_2418 MATE efflux family protein YP_001377455.1 KEGG: ade:Adeh_0232 teichoic acid biosynthesis related protein YP_001377456.1 PFAM: protein of unknown function DUF163; KEGG: ade:Adeh_0233 protein of unknown function DUF163 YP_001377458.1 KEGG: mva:Mvan_1717 PilT protein domain protein YP_001377459.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_001377460.1 KEGG: ade:Adeh_0236 phosphoribosyltransferase YP_001377461.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0237 tetratricopeptide protein YP_001377462.1 KEGG: ade:Adeh_0238 hypothetical protein YP_001377463.1 KEGG: ade:Adeh_0239 hypothetical protein YP_001377464.1 PFAM: TfoX domain protein; KEGG: ade:Adeh_0240 TfoX-like YP_001377465.1 KEGG: ade:Adeh_0241 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001377466.1 TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: ade:Adeh_0243 oligopeptide transporter OPT YP_001377467.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: ade:Adeh_2901 cupin domain protein YP_001377468.1 PFAM: response regulator receiver; KEGG: ade:Adeh_2705 response regulator receiver YP_001377469.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; KEGG: ade:Adeh_0246 ribosomal protein L11 methyltransferase YP_001377470.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_001377471.1 PFAM: RDD domain containing protein; KEGG: ade:Adeh_0248 RDD YP_001377472.1 PFAM: General secretory system II protein E domain protein; KEGG: ade:Adeh_0249 PBS lyase heat-like repeat protein YP_001377473.1 PFAM: carboxyl transferase; KEGG: ade:Adeh_0250 carboxyl transferase YP_001377474.1 KEGG: ade:Adeh_0251 hypothetical protein YP_001377475.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ade:Adeh_0252 cold-shock DNA-binding domain protein YP_001377476.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ade:Adeh_0253 2-nitropropane dioxygenase, NPD YP_001377477.1 KEGG: ade:Adeh_0254 hypothetical protein YP_001377478.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_0255 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001377480.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0256 histidine kinase YP_001377481.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ade:Adeh_0257 carbamoyl-phosphate synthase L chain, ATP-binding protein YP_001377482.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ade:Adeh_0258 biotin/lipoyl attachment protein YP_001377483.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; KEGG: ade:Adeh_0259 methylmalonyl-CoA mutase YP_001377484.1 PFAM: heat shock protein DnaJ domain protein; KEGG: ade:Adeh_0260 DnaJ like heat shock protein with tetratricopeptide repeats YP_001377485.1 PFAM: protein of unknown function UPF0044; KEGG: ade:Adeh_0261 protein of unknown function UPF0044 YP_001377486.1 KEGG: ade:Adeh_0262 hypothetical protein YP_001377487.1 KEGG: ade:Adeh_0263 hypothetical protein YP_001377488.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: ade:Adeh_0265 pseudouridine synthase, RluD YP_001377489.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ade:Adeh_0266 biopolymer transport protein ExbD/TolR YP_001377490.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ade:Adeh_0267 biopolymer transport protein ExbD/TolR YP_001377491.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ade:Adeh_0268 MotA/TolQ/ExbB proton channel YP_001377492.1 KEGG: ade:Adeh_0269 hypothetical protein YP_001377493.1 KEGG: ade:Adeh_0270 hypothetical protein YP_001377494.1 KEGG: ade:Adeh_0271 hypothetical protein YP_001377495.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_001377496.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_001377497.1 KEGG: ade:Adeh_0274 hypothetical protein YP_001377498.1 PFAM: Fmu (Sun) domain protein; KEGG: ade:Adeh_0276 methyltransferase YP_001377499.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycolase; zinc finger Fpg domain protein; KEGG: ade:Adeh_0277 DNA-formamidopyrimidine glycosylase YP_001377501.1 KEGG: ade:Adeh_3990 hypothetical protein YP_001377502.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_001377503.1 TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: ade:Adeh_0279 hypothetical protein YP_001377504.1 Catalyzes the phosphorylation of UMP to UDP YP_001377505.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_001377506.1 KEGG: ade:Adeh_0282 hypothetical protein YP_001377507.1 PFAM: protein of unknown function DUF1458; KEGG: bja:bll5352 hypothetical protein YP_001377508.1 KEGG: ade:Adeh_0283 hypothetical protein YP_001377509.1 PFAM: protein of unknown function DUF344; KEGG: mxa:MXAN_2651 hypothetical protein YP_001377510.1 KEGG: ade:Adeh_0512 hypothetical protein YP_001377511.1 TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; KEGG: ade:Adeh_0285 NAD+ synthetase YP_001377512.1 KEGG: ade:Adeh_0287 ABC-type Fe3+ transporter, periplasmic ligand binding protein YP_001377513.1 KEGG: pai:PAE2795 serine protease YP_001377514.1 PFAM: regulatory protein LuxR; KEGG: ade:Adeh_0288 transcriptional regulator, LuxR family YP_001377515.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: ade:Adeh_0289 transketolase YP_001377516.1 PFAM: Phosphoglycerate mutase; KEGG: ade:Adeh_0292 putative phosphohistidine phosphatase, SixA YP_001377517.1 TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ade:Adeh_0293 malto-oligosyltrehalose synthase YP_001377518.1 amylomaltase; acts to release glucose from maltodextrins YP_001377519.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: ade:Adeh_0295 glutamate--tRNA ligase YP_001377520.1 KEGG: ade:Adeh_2953 hypothetical protein YP_001377521.1 PFAM: tRNA--hydroxylase; KEGG: ade:Adeh_0296 tRNA-(MS(2)IO(6)A)-hydroxylase-like YP_001377522.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nha:Nham_1928 alcohol dehydrogenase, zinc-binding YP_001377523.1 PFAM: aminotransferase class I and II; KEGG: ade:Adeh_4103 aminotransferase, class I and II YP_001377524.1 KEGG: ade:Adeh_4102 hypothetical protein YP_001377525.1 PFAM: protein of unknown function DUF606; KEGG: reu:Reut_A0176 protein of unknown function DUF606 YP_001377526.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ade:Adeh_4101 arginase/agmatinase/formiminoglutamase YP_001377527.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: ade:Adeh_4097 leucyl aminopeptidase YP_001377528.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; PBS lyase HEAT domain protein repeat-containing protein; KEGG: ade:Adeh_4096 serine/threonine protein kinase YP_001377529.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_4095 glycosyl transferase, group 1 YP_001377530.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_001377531.1 TIGRFAM: oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: ade:Adeh_4092 oligopeptide transporter, OPT superfamily YP_001377532.1 KEGG: ade:Adeh_4091 hypothetical protein YP_001377533.1 PFAM: polysaccharide biosynthesis protein; KEGG: ade:Adeh_4090 membrane protein YP_001377534.1 KEGG: hne:HNE_2580 putative lipoprotein YP_001377535.1 TIGRFAM: Quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ade:Adeh_4084 zinc-binding alcohol dehydrogenase YP_001377536.1 KEGG: ade:Adeh_4083 hypothetical protein YP_001377537.1 KEGG: fra:Francci3_0984 hypothetical protein YP_001377538.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_4082 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001377539.1 KEGG: ade:Adeh_4081 heat shock protein DnaJ-like YP_001377540.1 PFAM: protein of unknown function DUF938; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_4080 protein of unknown function DUF938 YP_001377541.1 KEGG: sfu:Sfum_3866 hypothetical protein YP_001377542.1 PFAM: acyl-ACP thioesterase; KEGG: ade:Adeh_4078 acyl-ACP thioesterase YP_001377543.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001377544.1 KEGG: pfa:PFD0740w Plasmodium falciparum protein kinase, putative YP_001377545.1 PFAM: nucleoside recognition domain protein; KEGG: ade:Adeh_4077 nucleoside recognition YP_001377546.1 PFAM: nucleoside recognition domain protein; KEGG: ade:Adeh_4076 nucleoside recognition YP_001377547.1 PFAM: transglutaminase domain protein; KEGG: ade:Adeh_4075 transglutaminase-like YP_001377548.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ade:Adeh_4074 glyoxalase/bleomycin resistance protein/dioxygenase YP_001377549.1 KEGG: ade:Adeh_4073 hypothetical protein YP_001377550.1 PFAM: OsmC family protein; KEGG: ade:Adeh_4072 hypothetical protein YP_001377551.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_001377552.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: ade:Adeh_4070 diaminopimelate decarboxylase YP_001377553.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_001377554.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_001377555.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ade:Adeh_4067 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001377556.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: ade:Adeh_4066 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_001377557.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: mxa:MXAN_5924 TPR domain protein YP_001377558.1 PFAM: Glutathione S-transferase domain; KEGG: ade:Adeh_3380 glutathione S-transferase-like YP_001377559.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: cte:CT1717 tungsten formylmethanofuran dehydrogenase, subunit E, putative YP_001377560.1 KEGG: ade:Adeh_3999 hypothetical protein YP_001377561.1 PFAM: class II aldolase/adducin family protein; KEGG: ade:Adeh_4065 class II aldolase/adducin-like YP_001377562.1 TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: ade:Adeh_4064 KpsF/GutQ family protein YP_001377563.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_001377564.1 KEGG: ade:Adeh_4061 hypothetical protein YP_001377565.1 PFAM: PGAP1 family protein; KEGG: ade:Adeh_4060 alpha/beta hydrolase fold acetyltransferase YP_001377566.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: ade:Adeh_4059 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001377567.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: ade:Adeh_4059 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001377568.1 KEGG: mxa:MXAN_0809 hypothetical protein YP_001377569.1 TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; KEGG: ade:Adeh_4058 tryptophan synthase, alpha subunit YP_001377570.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001377571.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: ade:Adeh_4056 phosphoribosylanthranilate isomerase YP_001377572.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: ade:Adeh_4055 indole-3-glycerol-phosphate synthase YP_001377573.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001377574.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: ade:Adeh_4053 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase YP_001377575.1 TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: ade:Adeh_4052 anthranilate synthase YP_001377576.1 TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; KEGG: ade:Adeh_4051 aspartate 1-decarboxylase YP_001377577.1 PFAM: glycosyl transferase family 25; KEGG: ade:Adeh_4050 glycosyl transferase, family 25 YP_001377578.1 PFAM: glycosyl transferase group 1; KEGG: pha:PSHAa2452 glycosyl transferase YP_001377579.1 PFAM: DSBA oxidoreductase; KEGG: ade:Adeh_4049 DsbA oxidoreductase YP_001377580.1 KEGG: ade:Adeh_4048 hypothetical protein YP_001377581.1 KEGG: ade:Adeh_4047 hypothetical protein YP_001377582.1 PFAM: SirA family protein; KEGG: ade:Adeh_4046 SirA-like YP_001377583.1 PFAM: thiamine biosynthesis protein; KEGG: ade:Adeh_4045 thiamine biosynthesis protein YP_001377584.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001377585.1 PFAM: penicillin-binding protein transpeptidase; KEGG: ade:Adeh_4043 penicillin-binding protein, transpeptidase YP_001377586.1 KEGG: ade:Adeh_4041 hypothetical protein YP_001377587.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ade:Adeh_4040 electron transport protein SCO1/SenC like YP_001377588.1 KEGG: ade:Adeh_4039 dihydrodipicolinate reductase YP_001377589.1 KEGG: ade:Adeh_4038 MaoC-like dehydratase YP_001377590.1 PFAM: MaoC domain protein dehydratase; KEGG: ade:Adeh_4037 MaoC-like dehydratase YP_001377591.1 KEGG: ade:Adeh_4036 hypothetical protein YP_001377592.1 KEGG: ade:Adeh_4035 hypothetical protein YP_001377593.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ade:Adeh_4034 MotA/TolQ/ExbB proton channel YP_001377594.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ade:Adeh_4033 biopolymer transport protein ExbD/TolR YP_001377595.1 protein associated with Co2+ and Mg2+ efflux YP_001377596.1 PFAM: Silent information regulator protein Sir2; KEGG: ade:Adeh_4029 silent information regulator protein Sir2 YP_001377597.1 KEGG: ade:Adeh_4027 hypothetical protein YP_001377598.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_4026 metallophosphoesterase YP_001377599.1 KEGG: ade:Adeh_4025 hypothetical protein YP_001377600.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: ade:Adeh_4024 transcriptional coactivator/pterin dehydratase YP_001377601.1 PFAM: protein of unknown function DUF423; KEGG: ade:Adeh_4023 protein of unknown function DUF423 YP_001377602.1 PFAM: Rhodanese domain protein; KEGG: ade:Adeh_4022 rhodanese-like YP_001377603.1 PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: ade:Adeh_4021 amino acid/peptide transporter YP_001377604.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: ade:Adeh_4020 amino acid/peptide transporter YP_001377605.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: xac:XAC2450 ATP-dependent DNA helicase YP_001377606.1 KEGG: ade:Adeh_4019 hypothetical protein YP_001377607.1 KEGG: ade:Adeh_4015 hypothetical protein YP_001377608.1 PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_4014 hypothetical protein YP_001377609.1 KEGG: ade:Adeh_4013 hypothetical protein YP_001377610.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_0859 HNH nuclease YP_001377611.1 PFAM: putative RNA methylase; THUMP domain protein; KEGG: ade:Adeh_4012 putative RNA methylase YP_001377612.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ade:Adeh_4011 diguanylate cyclase (GGDEF domain) YP_001377613.1 KEGG: ade:Adeh_4010 outer membrane protein, OmpA/MotB family YP_001377614.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ade:Adeh_4009 two component transcriptional regulator, winged helix family YP_001377615.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ade:Adeh_4008 histidine kinase YP_001377616.1 PFAM: phosphate-selective porin O and P; KEGG: ade:Adeh_4007 hypothetical protein YP_001377617.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ade:Adeh_4006 ABC transporter, periplasmic phosphate binding protein YP_001377618.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4005 phosphate ABC transporter, inner membrane subunit PstC YP_001377619.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4004 ABC phosphate transporter, inner membrane subunit YP_001377620.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_001377621.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: ade:Adeh_4002 phosphate uptake regulator, PhoU YP_001377622.1 PFAM: Phosphoglycerate mutase; KEGG: bba:Bd1011 phosphohistidine phosphatase YP_001377623.1 KEGG: bte:BTH_II0398 lipoprotein, putative YP_001377624.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: ade:Adeh_4001 phosphoesterase, PA-phosphatase related YP_001377625.1 KEGG: ade:Adeh_4000 hypothetical protein YP_001377626.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: mxa:MXAN_0035 ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_001377627.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_3998 ABC transporter, inner membrane subunit YP_001377628.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3997 ABC transporter, ATPase subunit YP_001377629.1 PFAM: putative RNA methylase; KEGG: ade:Adeh_3996 putative RNA methylase YP_001377630.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_3994 glycosyl transferase, family 2 YP_001377631.1 KEGG: ade:Adeh_3989 major facilitator superfamily transporter YP_001377632.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3988 ABC transporter, ATPase subunit YP_001377633.1 KEGG: cph:Cpha266_1734 hypothetical protein YP_001377634.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ade:Adeh_3985 glycerophosphoryl diester phosphodiesterase YP_001377635.1 KEGG: ade:Adeh_3984 hypothetical protein YP_001377636.1 KEGG: ade:Adeh_3982 hypothetical protein YP_001377637.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ade:Adeh_3981 TRAP dicarboxylate transporter-DctM subunit YP_001377638.1 KEGG: ade:Adeh_3980 hypothetical protein YP_001377639.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ade:Adeh_3979 TRAP dicarboxylate transporter-DctP subunit YP_001377640.1 KEGG: ade:Adeh_3978 hypothetical protein YP_001377641.1 PFAM: response regulator receiver; KEGG: ade:Adeh_3975 response regulator receiver domain protein (CheY-like) YP_001377642.1 KEGG: ade:Adeh_3974 hypothetical protein YP_001377643.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: ade:Adeh_3973 uracil-DNA glycosylase superfamily YP_001377644.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: ade:Adeh_3972 rare lipoprotein A YP_001377645.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sth:STH2088 two-component hybrid sensor and regulator YP_001377646.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ade:Adeh_3971 ribulose-phosphate 3-epimerase YP_001377647.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein YP_001377648.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: ade:Adeh_3969 methionyl-tRNA formyltransferase YP_001377649.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_4042 HNH endonuclease YP_001377650.1 KEGG: ade:Adeh_4018 HNH endonuclease YP_001377651.1 PFAM: MOFRL domain protein; KEGG: ade:Adeh_3968 MOFRL YP_001377652.1 PFAM: histidine kinase HAMP region domain protein; KEGG: ade:Adeh_3967 HAMP domain protein YP_001377653.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ade:Adeh_3966 LigA YP_001377654.1 KEGG: ade:Adeh_3965 hypothetical protein YP_001377655.1 KEGG: ade:Adeh_3964 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_001377656.1 PFAM: protein of unknown function DUF179; KEGG: ade:Adeh_3962 protein of unknown function DUF179 YP_001377657.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ade:Adeh_1457 DNA-binding cold-shock protein YP_001377658.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; KEGG: tbd:Tbd_1446 DNA polymerase X YP_001377659.1 KEGG: ade:Adeh_1548 hypothetical protein YP_001377660.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: ade:Adeh_3960 2',5' RNA ligase YP_001377661.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: ade:Adeh_3959 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_001377662.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: ade:Adeh_3958 UDP-N-acetylglucosamine diphosphorylase YP_001377663.1 TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: ade:Adeh_3957 gamma-glutamyltransferase YP_001377664.1 PFAM: CheW domain protein; KEGG: ade:Adeh_3955 CheW protein YP_001377665.1 PFAM: MCP methyltransferase CheR-type; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 12; KEGG: mxa:MXAN_2682 chemotaxis protein methyltransferase CheR YP_001377666.1 PFAM: response regulator receiver; KEGG: mxa:MXAN_2684 response regulator CheY4 YP_001377667.1 PFAM: CheW domain protein; KEGG: mxa:MXAN_2685 chemotaxis protein CheW YP_001377668.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mxa:MXAN_2686 sensor histidine kinase/response regulator CheA4 YP_001377669.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: ade:Adeh_0614 response regulator receiver (CheY-like) modulated CheB methylesterase YP_001377670.1 PFAM: TatD-related deoxyribonuclease; KEGG: ade:Adeh_3953 TatD-related deoxyribonuclease YP_001377671.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: ade:Adeh_3952 hypothetical protein YP_001377672.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_3951 thioredoxin reductase YP_001377673.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: ava:Ava_4335 trans-aconitate 2-methyltransferase YP_001377674.1 PFAM: DSBA oxidoreductase; KEGG: ade:Adeh_3950 DsbA oxidoreductase YP_001377675.1 TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; KEGG: ade:Adeh_3949 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_001377676.1 KEGG: ade:Adeh_3948 hypothetical protein YP_001377677.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: ade:Adeh_3947 prolyl-tRNA synthetase YP_001377678.1 KEGG: ade:Adeh_3946 hypothetical protein YP_001377679.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: ade:Adeh_3945 orotidine 5'-phosphate decarboxylase YP_001377680.1 PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_0202 alpha/beta hydrolase fold YP_001377681.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bja:blr5308 anti-oxidant protein YP_001377682.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rso:RS04693 hypothetical protein YP_001377683.1 PFAM: regulatory protein ArsR; KEGG: mpa:MAP1641c hypothetical protein YP_001377684.1 PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl transferase family 28; KEGG: rpe:RPE_2215 glycosyl transferase, family 28 YP_001377685.1 PFAM: Lytic transglycosylase catalytic; KEGG: mxa:MXAN_0210 transglycosylase SLT domain protein YP_001377686.1 KEGG: ade:Adeh_3039 hypothetical protein YP_001377687.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_2240 oxidoreductase, zinc-binding dehydrogenase family YP_001377688.1 member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001377689.1 KEGG: nca:Noca_1954 putative lipoprotein YP_001377690.1 KEGG: ade:Adeh_0885 hypothetical protein YP_001377691.1 PFAM: Smr protein/MutS2; KEGG: ade:Adeh_3940 Smr protein/MutS2-like YP_001377692.1 KEGG: mxa:MXAN_1091 hypothetical protein YP_001377693.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3939 ABC transporter, ATPase subunit YP_001377694.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_3938 protein of unknown function DUF214 YP_001377695.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_3937 protein of unknown function DUF214 YP_001377696.1 KEGG: ade:Adeh_3936 hypothetical protein YP_001377697.1 KEGG: ade:Adeh_3935 hypothetical protein YP_001377698.1 PFAM: protein of unknown function DUF302; KEGG: ade:Adeh_3932 protein of unknown function DUF302 YP_001377699.1 PFAM: multicopper oxidase type 2; KEGG: tbd:Tbd_1072 conserved hypothetical protein containing twin-arginine translocation pathway signal YP_001377700.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_001377701.1 KEGG: ade:Adeh_4085 hypothetical protein YP_001377703.1 PFAM: Formamidopyrimidine-DNA glycolase; KEGG: ade:Adeh_3929 DNA-formamidopyrimidine glycosylase YP_001377704.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: ade:Adeh_3091 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001377705.1 PFAM: Amidase; KEGG: ade:Adeh_3928 amidase YP_001377706.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_3927 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001377707.1 KEGG: ade:Adeh_0469 hypothetical protein YP_001377708.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_3914 bifunctional deaminase-reductase-like YP_001377709.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rha:RHA1_ro08706 hypothetical protein YP_001377710.1 PFAM: regulatory protein ArsR; KEGG: rha:RHA1_ro08705 probable transcriptional regulator, ArsR family YP_001377711.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: ade:Adeh_0471 hydrogenase accessory protein HypB YP_001377712.1 PFAM: hydrogenase expression/synthesis HypA; KEGG: ade:Adeh_0472 hydrogenase expression/synthesis, HypA YP_001377713.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: ade:Adeh_0473 hydrogenase expression/formation protein HypE YP_001377714.1 PFAM: hydrogenase formation HypD protein; KEGG: ade:Adeh_0474 hydrogenase formation HypD protein YP_001377715.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: ade:Adeh_0475 hydrogenase assembly chaperone HypC/HupF YP_001377716.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: ade:Adeh_0476 (NiFe) hydrogenase maturation protein HypF YP_001377717.1 PFAM: zinc finger HypF domain protein; KEGG: ade:Adeh_0476 (NiFe) hydrogenase maturation protein HypF YP_001377719.1 PFAM: glycosyl transferase family 39; KEGG: chu:CHU_3773 4-amino-4-deoxy-L-arabinose transferase (lipid A modification) YP_001377720.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: ade:Adeh_0477 peptidase M52, hydrogen uptake protein YP_001377721.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: ade:Adeh_0478 nickel-dependent hydrogenase, large subunit YP_001377722.1 HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits YP_001377723.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2 YP_001377724.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; KEGG: ade:Adeh_0481 hydrogenase (NiFe) small subunit (HydA) YP_001377725.1 PFAM: protein of unknown function DUF195; KEGG: sus:Acid_7416 protein of unknown function DUF195 YP_001377726.1 KEGG: ade:Adeh_0483 MutT/NUDIX family protein YP_001377727.1 KEGG: ade:Adeh_3529 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001377728.1 PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_0486 hypothetical protein YP_001377729.1 PFAM: MgtC/SapB transporter; KEGG: ade:Adeh_0487 MgtC/SapB transporter YP_001377730.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_2367 acetyltransferase, GNAT family YP_001377731.1 PFAM: protein of unknown function UPF0016; KEGG: ade:Adeh_0488 protein of unknown function UPF0016 YP_001377732.1 KEGG: ade:Adeh_0490 hypothetical protein YP_001377733.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: ade:Adeh_3599 fimbrial biogenesis outer membrane usher protein YP_001377734.1 KEGG: ade:Adeh_3600 P pilus assembly protein chaperone PapD-like YP_001377735.1 PFAM: Spore coat U domain protein; KEGG: ade:Adeh_3601 spore coat U YP_001377736.1 PFAM: Spore coat U domain protein; KEGG: ade:Adeh_3602 spore coat U YP_001377737.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2956 periplasmic sensor hybrid histidine kinase YP_001377738.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_0712 sensor histidine kinase/response regulator YP_001377739.1 PFAM: MCP methyltransferase CheR-type; KEGG: ava:Ava_4781 MCP methyltransferase, CheR-type YP_001377740.1 KEGG: ade:Adeh_4087 hypothetical protein YP_001377741.1 KEGG: ade:Adeh_4088 hypothetical protein YP_001377742.1 KEGG: ade:Adeh_4089 hypothetical protein YP_001377743.1 PFAM: cytochrome oxidase assembly; KEGG: ade:Adeh_0200 cytochrome oxidase assembly protein YP_001377744.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: ade:Adeh_4193 outer membrane protein, OmpA/MotB family YP_001377745.1 KEGG: rfr:Rfer_3496 hypothetical protein YP_001377746.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: ade:Adeh_0492 hemerythrin-like, metal-binding protein YP_001377747.1 KEGG: saz:Sama_0488 hypothetical protein YP_001377748.1 PFAM: aldo/keto reductase; KEGG: ade:Adeh_2076 aldo/keto reductase YP_001377749.1 PFAM: S1/P1 nuclease; KEGG: xcb:XC_0908 endonuclease YP_001377750.1 PFAM: Uncharacterized protein UPF0065; KEGG: ade:Adeh_2249 uncharacterized protein UPF0065 YP_001377751.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: ade:Adeh_2248 protein of unknown function DUF112, transmembrane YP_001377752.1 PFAM: protein of unknown function DUF1468; KEGG: ade:Adeh_2247 hypothetical protein YP_001377754.1 PFAM: peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; KEGG: dar:Daro_0246 peptidase M48, Ste24p YP_001377756.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_4017 major facilitator superfamily MFS_1 transporter YP_001377757.1 PFAM: DoxX family protein; KEGG: mxa:MXAN_0012 DoxD-like family protein YP_001377758.1 KEGG: ade:Adeh_2162 methyltransferase YP_001377759.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sus:Acid_4926 alcohol dehydrogenase GroES domain protein YP_001377760.1 KEGG: nha:Nham_0721 cupin 2, conserved barrel YP_001377761.1 PFAM: beta-lactamase domain protein; KEGG: mxa:MXAN_5359 metallo-beta-lactamase family protein YP_001377762.1 PFAM: protein of unknown function DUF323; KEGG: ade:Adeh_2207 protein of unknown function DUF323 YP_001377763.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_2208 glycosyl transferase, group 1 YP_001377764.1 PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU2744 major facilitator family transporter YP_001377765.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ade:Adeh_0516 RND efflux system, outer membrane lipoprotein, NodT YP_001377766.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: ade:Adeh_0517 hydrophobe/amphiphile efflux-1 HAE1 YP_001377767.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ade:Adeh_0518 secretion protein HlyD YP_001377768.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_0519 transcriptional regulator, TetR family YP_001377769.1 PFAM: CHAD domain containing protein; KEGG: mxa:MXAN_0861 CHAD domain protein YP_001377770.1 PFAM: Inorganic pyrophosphatase; KEGG: ade:Adeh_4099 inorganic diphosphatase YP_001377771.1 PFAM: Polyphosphate kinase; KEGG: sus:Acid_3657 polyphosphate kinase YP_001377772.1 PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; KEGG: mxa:MXAN_6322 phosphatase, Ppx/GppA family YP_001377773.1 KEGG: ade:Adeh_3781 LigA YP_001377774.1 PFAM: DoxX family protein; KEGG: gme:Gmet_0230 DoxX YP_001377775.1 PFAM: regulatory protein ArsR; KEGG: ade:Adeh_3094 transcriptional regulator, ArsR family YP_001377776.1 KEGG: ade:Adeh_3093 hypothetical protein YP_001377777.1 KEGG: ade:Adeh_3126 hypothetical protein YP_001377778.1 PFAM: DGPFAETKE family protein; KEGG: bxe:Bxe_B0232 hypothetical protein YP_001377779.1 PFAM: CHRD domain containing protein; KEGG: ade:Adeh_3145 CHRD YP_001377780.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: ade:Adeh_3146 Rieske Fe-S protein YP_001377781.1 KEGG: ade:Adeh_3147 hypothetical protein YP_001377782.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ade:Adeh_3148 sigma-24 (FecI-like) YP_001377783.1 KEGG: ade:Adeh_3149 hypothetical protein YP_001377784.1 KEGG: ade:Adeh_3150 hypothetical protein YP_001377785.1 KEGG: tcx:Tcr_1610 hypothetical protein YP_001377786.1 PFAM: chemotaxis sensory transducer; KEGG: mxa:MXAN_2683 methyl accepting chemotaxis protein YP_001377787.1 KEGG: mmr:Mmar10_2885 putative transcriptional regulator YP_001377788.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: ttj:TTHB098 NADH-ubiquinone oxidoreductase 39 kDa subunit related protein YP_001377789.1 PFAM: YhhN family protein; KEGG: mxa:MXAN_1645 hypothetical protein YP_001377790.1 KEGG: ade:Adeh_0551 putative oxidoreductase YP_001377792.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_2203 protein of unknown function DUF6, transmembrane YP_001377793.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: tfu:Tfu_2114 carbohydrate kinase, thermoresistant glucokinase YP_001377794.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_001377795.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001377796.1 PFAM: Phosphoglycerate mutase; KEGG: sus:Acid_7225 phosphoglycerate mutase YP_001377797.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: ade:Adeh_1440 6-phosphogluconolactonase YP_001377798.1 PFAM: alpha/beta hydrolase fold; transcriptional activator domain; KEGG: reh:H16_A1422 transcriptional regulator, LuxR-family containing alpha/beta hydrolase domain YP_001377799.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_2253 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001377800.1 PFAM: regulatory protein ArsR; KEGG: bur:Bcep18194_B2009 transcriptional regulator, ArsR family YP_001377801.1 KEGG: nfa:nfa4230 hypothetical protein YP_001377802.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: lic:LIC10661 hypothetical protein YP_001377803.1 PFAM: transposase IS4 family protein; KEGG: vei:Veis_4881 transposase, IS4 family protein YP_001377804.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: cdi:DIP2317 conserved hypothetical DNA-binding protein YP_001377805.1 KEGG: ade:Adeh_3259 hypothetical protein YP_001377807.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: ade:Adeh_0567 RNA polymerase associated protein RapA YP_001377808.1 TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ade:Adeh_0568 acetylornithine deacetylase (ArgE) YP_001377809.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate YP_001377810.1 PFAM: diaminopimelate epimerase; KEGG: ade:Adeh_0570 diaminopimelate epimerase YP_001377811.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; GAF domain protein; KEGG: ade:Adeh_0571 putative GAF sensor protein YP_001377812.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0572 response regulator receiver domain protein (CheY-like) YP_001377813.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: ade:Adeh_0573 phenazine biosynthesis PhzC/PhzF protein YP_001377814.1 KEGG: ade:Adeh_0574 hypothetical protein YP_001377815.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_0575 hemerythrin-like, metal-binding protein YP_001377816.1 PFAM: peptidase M16 domain protein; KEGG: ade:Adeh_0576 peptidase M16-like YP_001377817.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0577 periplasmic sensor signal transduction histidine kinase YP_001377818.1 KEGG: ade:Adeh_0578 hypothetical protein YP_001377819.1 KEGG: ade:Adeh_0579 hypothetical protein YP_001377820.1 KEGG: ade:Adeh_0580 putative DeoR-family transcriptional regulator YP_001377821.1 KEGG: ade:Adeh_0581 transcriptional regulator-like YP_001377822.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0582 response regulator receiver domain protein (CheY-like) YP_001377825.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ade:Adeh_0583 NAD-binding 6-phosphogluconate dehydrogenase YP_001377826.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: ade:Adeh_0584 FAD dependent oxidoreductase YP_001377827.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: mxa:MXAN_4832 ATP-dependent Clp protease, ATP-binding subunit ClpC YP_001377828.1 PFAM: arginine repressor; KEGG: ade:Adeh_0586 transcriptional regulator, ArgR YP_001377829.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; arginine biosynthesis protein ArgJ; KEGG: ade:Adeh_0587 arginine biosynthesis bifunctional protein ArgJ/acetylglutamate kinase YP_001377830.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: ade:Adeh_0588 N-acetyl-gamma-glutamyl-phosphate reductase YP_001377831.1 KEGG: ade:Adeh_0589 hypothetical protein YP_001377832.1 KEGG: ade:Adeh_2592 hypothetical protein YP_001377833.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: ade:Adeh_0591 cytochrome c biogenesis protein, transmembrane region/thioredoxin-related YP_001377834.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis YP_001377835.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: ade:Adeh_0593 FeS cluster assembly scaffold IscU YP_001377836.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: ade:Adeh_0594 HesB/YadR/YfhF YP_001377837.1 TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSCB oligomerisation domain protein; KEGG: ade:Adeh_0595 co-chaperone Hsc20 YP_001377838.1 involved in the maturation of iron-sulfur cluster-containing proteins YP_001377839.1 PFAM: ferredoxin; KEGG: ade:Adeh_0598 ferredoxin YP_001377840.1 PFAM: protein of unknown function DUF528; KEGG: ade:Adeh_0599 protein of unknown function DUF528 YP_001377841.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: ade:Adeh_0600 response regulator receiver (CheY-like) modulated CheB methylesterase YP_001377842.1 PFAM: MCP methyltransferase CheR-type; KEGG: ade:Adeh_0601 MCP methyltransferase, CheR-type YP_001377843.1 PFAM: CheW domain protein; KEGG: ade:Adeh_0602 CheW protein YP_001377844.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: ade:Adeh_0603 CheA signal transduction histidine kinase YP_001377845.1 stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: ade:Adeh_0604 CheD, stimulates methylation of MCP proteins YP_001377846.1 KEGG: ade:Adeh_0605 GAF domain protein YP_001377847.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0606 response regulator receiver domain protein (CheY-like) YP_001377848.1 KEGG: ade:Adeh_0607 hypothetical protein YP_001377849.1 KEGG: ade:Adeh_0608 hypothetical protein YP_001377850.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0609 response regulator receiver domain protein (CheY-like) YP_001377851.1 PFAM: CheW domain protein; KEGG: ade:Adeh_0610 CheW protein YP_001377852.1 PFAM: CheW domain protein; KEGG: ade:Adeh_0611 hypothetical protein YP_001377853.1 PFAM: chemotaxis sensory transducer; KEGG: ade:Adeh_0612 methyl-accepting chemotaxis sensory transducer YP_001377854.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: ade:Adeh_0613 CheA signal transduction histidine kinase YP_001377855.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: ade:Adeh_0614 response regulator receiver (CheY-like) modulated CheB methylesterase YP_001377856.1 PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0615 chemotaxis protein methyltransferase CheR YP_001377857.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0616 response regulator receiver domain protein (CheY-like) YP_001377858.1 PFAM: protein of unknown function DUF28; KEGG: mxa:MXAN_4974 conserved hypothetical protein TIGR01033 YP_001377859.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; KEGG: ade:Adeh_0617 glycosyl transferase, family 3 YP_001377860.1 TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine phosphorylase family 2; KEGG: ade:Adeh_0618 inosine, guanosine, xanthosine phosphorylase YP_001377861.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_0619 hypothetical protein YP_001377862.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ade:Adeh_0620 cytidine deaminase, homotetrameric YP_001377863.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: ade:Adeh_0621 riboflavin biosynthesis protein RibF YP_001377864.1 TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: ade:Adeh_0622 type II secretion system protein E YP_001377865.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ade:Adeh_0623 twitching motility protein YP_001377866.1 PFAM: type II secretion system protein; KEGG: ade:Adeh_0624 type II secretion system protein YP_001377867.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_0625 multi-sensor signal transduction histidine kinase YP_001377868.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: ade:Adeh_0626 two component, sigma54 specific, transcriptional regulator, fis family YP_001377869.1 KEGG: ade:Adeh_0627 Tfp pilus assembly protein tip-associated adhesin PilY1-like YP_001377870.1 KEGG: ade:Adeh_0628 hypothetical protein YP_001377871.1 KEGG: ade:Adeh_0629 hypothetical protein YP_001377872.1 KEGG: ade:Adeh_0630 hypothetical protein YP_001377873.1 KEGG: ade:Adeh_0631 hypothetical protein YP_001377874.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0632 tetratricopeptide protein) YP_001377875.1 KEGG: ade:Adeh_0633 hypothetical protein YP_001377876.1 KEGG: ade:Adeh_0634 hypothetical protein YP_001377877.1 KEGG: ade:Adeh_0635 fimbrial protein pilin YP_001377878.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_0636 ABC transporter, ATPase subunit YP_001377879.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: ade:Adeh_0637 prepilin peptidase YP_001377880.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0638 periplasmic sensor signal transduction histidine kinase YP_001377881.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0639 two component, sigma54 specific, transcriptional regulator, fis family YP_001377882.1 PFAM: helix-turn-helix domain protein; KEGG: ade:Adeh_0640 transcriptional regulator, XRE family YP_001377883.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: ade:Adeh_0641 type IV pilus assembly protein PilM YP_001377884.1 PFAM: Fimbrial assembly family protein; KEGG: ade:Adeh_0642 fimbrial assembly YP_001377885.1 KEGG: ade:Adeh_0643 type IV pilus biogenesis protein PilO YP_001377886.1 KEGG: ade:Adeh_0644 hypothetical protein YP_001377887.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: ade:Adeh_0645 type II and III secretion system protein, secretin YP_001377888.1 KEGG: ade:Adeh_0646 hypothetical protein YP_001377889.1 KEGG: ade:Adeh_0647 hypothetical protein YP_001377890.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P/YeiP protein; Elongation factor KOW domain protein; Elongation factor P; KEGG: ade:Adeh_0648 translation elongation factor P YP_001377891.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ade:Adeh_0649 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001377892.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: ade:Adeh_0650 acetyl-CoA carboxylase, biotin carboxylase YP_001377893.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0651 tetratricopeptide repeat protein YP_001377894.1 KEGG: ade:Adeh_0652 general secretion pathway protein-related protein YP_001377895.1 PFAM: protein of unknown function DUF490; KEGG: ade:Adeh_0653 protein of unknown function DUF490 YP_001377896.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: ade:Adeh_0654 surface antigen (D15) YP_001377897.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: ade:Adeh_0655 HAD-superfamily hydrolase subfamily IB, PSPase-like YP_001377898.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0657 methyltransferase type 11 YP_001377899.1 PFAM: Ppx/GppA phosphatase; KEGG: ade:Adeh_0658 Ppx/GppA phosphatase YP_001377900.1 PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: ade:Adeh_0659 TolB-like protein YP_001377901.1 TIGRFAM: TonB family protein; KEGG: ade:Adeh_0660 TonB-like protein YP_001377902.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ade:Adeh_0661 biopolymer transport protein ExbD/TolR YP_001377903.1 TIGRFAM: Tol-Pal system TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ade:Adeh_0662 MotA/TolQ/ExbB proton channel YP_001377904.1 KEGG: ade:Adeh_0244 LigA YP_001377905.1 TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; KEGG: ade:Adeh_0664 glutamate racemase YP_001377906.1 KEGG: ade:Adeh_0665 hypothetical protein YP_001377907.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_0666 ABC transporter, ATPase subunit YP_001377908.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_0667 protein of unknown function DUF214 YP_001377909.1 PFAM: peptidase M23B; KEGG: ade:Adeh_0668 peptidase M23B YP_001377910.1 TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: ade:Adeh_0669 carboxyl-terminal protease YP_001377911.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_0670 glycosyl transferase, family 2 YP_001377912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_0671 GCN5-related N-acetyltransferase YP_001377913.1 PFAM: glycosyl transferase family 2; KEGG: bbr:BB4029 putative glycosyl transferase YP_001377914.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ade:Adeh_0672 haloacid dehalogenase-like hydrolase YP_001377915.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: ade:Adeh_0673 signal recognition particle-docking protein FtsY YP_001377916.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: ade:Adeh_0674 chromosome segregation protein SMC YP_001377917.1 KEGG: ade:Adeh_0676 hypothetical protein YP_001377918.1 KEGG: ade:Adeh_0677 hypothetical protein YP_001377919.1 PFAM: Fimbrial assembly family protein; KEGG: ade:Adeh_0678 fimbrial assembly protein YP_001377920.1 KEGG: ade:Adeh_0679 hypothetical protein YP_001377921.1 KEGG: ade:Adeh_0680 hypothetical protein YP_001377922.1 KEGG: ade:Adeh_0681 hypothetical protein YP_001377923.1 KEGG: ade:Adeh_0682 hypothetical protein YP_001377924.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: ade:Adeh_0683 general secretion pathway protein G YP_001377925.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: ade:Adeh_0684 general secretion pathway protein F YP_001377926.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_0685 type II secretion system protein E YP_001377927.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: ade:Adeh_0686 type II and III secretion system protein YP_001377928.1 KEGG: ade:Adeh_0687 hypothetical protein YP_001377929.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0688 two component, sigma54 specific, transcriptional regulator, fis family YP_001377930.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_001377931.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001377932.1 KEGG: ade:Adeh_0693 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase YP_001377933.1 catalyzes the hydrolysis of acylphosphate YP_001377934.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_0695 radical SAM YP_001377935.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: ade:Adeh_0696 ribonuclease, Rne/Rng family YP_001377936.1 TIGRFAM: putative ribonuclease BN; PFAM: protein of unknown function UPF0074; ribonuclease BN; KEGG: ade:Adeh_0697 ribonuclease BN, putative YP_001377937.1 PFAM: histone family protein DNA-binding protein; KEGG: ade:Adeh_0698 histone-like DNA-binding protein YP_001377938.1 PFAM: type III secretion FHIPEP protein; KEGG: ade:Adeh_0699 type III secretion FHIPEP YP_001377939.1 PFAM: type III secretion exporter; KEGG: ade:Adeh_0700 type III secretion exporter YP_001377940.1 PFAM: type III secretion system inner membrane R protein; KEGG: ade:Adeh_0701 type III secretion system inner membrane R protein YP_001377941.1 PFAM: export protein FliQ family 3; KEGG: ade:Adeh_0702 type III secretion protein HrpO YP_001377942.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response YP_001377943.1 KEGG: ade:Adeh_0704 hypothetical protein YP_001377944.1 TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: ade:Adeh_0705 surface presentation of antigens (SpoA) protein YP_001377945.1 PFAM: secretory protein YscJ/FliF family protein; KEGG: ade:Adeh_0706 secretory protein YscJ/FliF YP_001377946.1 KEGG: ade:Adeh_0707 hypothetical protein YP_001377947.1 KEGG: mxa:MXAN_5654 hypothetical protein YP_001377948.1 PFAM: protein of unknown function DUF1704; KEGG: ade:Adeh_0709 hypothetical protein YP_001377949.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: ade:Adeh_0710 protein of unknown function DUF125, transmembrane YP_001377950.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_001377951.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_001377952.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_001377953.1 PFAM: histidine biosynthesis protein; KEGG: ade:Adeh_0715 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_001377954.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: ade:Adeh_0716 imidazoleglycerol phosphate synthase, cyclase subunit YP_001377955.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001377956.1 PFAM: GatB/Yqey domain protein; KEGG: ade:Adeh_0719 GatB/YqeY YP_001377957.1 TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; KEGG: ade:Adeh_0720 DNA primase YP_001377958.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: ade:Adeh_0721 sigma 70 (RpoD) YP_001377959.1 PFAM: protein of unknown function DUF164; KEGG: ade:Adeh_0722 protein of unknown function DUF164 YP_001377960.1 PFAM: ribonuclease H; KEGG: ade:Adeh_0723 ribonuclease H YP_001377961.1 PFAM: protein of unknown function DUF81; KEGG: rxy:Rxyl_1829 protein of unknown function DUF81 YP_001377962.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sco:SCO6039 putative flavoprotein oxidoreductase YP_001377964.1 TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: ade:Adeh_0725 peptide deformylase YP_001377965.1 PFAM: heat shock protein DnaJ domain protein; KEGG: ade:Adeh_0726 hypothetical protein YP_001377966.1 TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_0727 primosomal protein N' YP_001377967.1 KEGG: ade:Adeh_0728 hypothetical protein YP_001377968.1 KEGG: chy:CHY_0233 putative cytochrome c YP_001377969.1 PFAM: protein of unknown function UPF0227; KEGG: ade:Adeh_0729 protein of unknown function UPF0227 YP_001377970.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0730 AAA ATPase YP_001377971.1 PFAM: ATP-NAD/AcoX kinase; KEGG: ade:Adeh_0731 NAD(+) kinase YP_001377972.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: ade:Adeh_0732 DNA repair protein RecN YP_001377973.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: ade:Adeh_0733 serine/threonine phosphatase YP_001377974.1 PFAM: peptidase M23B; KEGG: ade:Adeh_0734 peptidase M23B YP_001377975.1 KEGG: ade:Adeh_0735 hypothetical protein YP_001377976.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: helicase domain protein; SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: ade:Adeh_0736 preprotein translocase, SecA subunit YP_001377977.1 KEGG: ade:Adeh_0737 hypothetical protein YP_001377978.1 PFAM: CBS domain containing protein; KEGG: dar:Daro_2870 CBS YP_001377979.1 SMART: HhH-GPD family protein; KEGG: ade:Adeh_0738 HhH-GPD YP_001377980.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: ade:Adeh_0739 putative transcriptional regulator, AsnC family YP_001377981.1 PFAM: protein of unknown function UPF0118; KEGG: ade:Adeh_0747 protein of unknown function UPF0118 YP_001377982.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ade:Adeh_0748 FAD/NAD(P)-binding oxidoreductase YP_001377983.1 PFAM: beta-lactamase domain protein; KEGG: ade:Adeh_0750 beta-lactamase-like YP_001377984.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_001377985.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: ade:Adeh_0752 peptidoglycan-binding peptidase M23B YP_001377986.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_001377987.1 PFAM: regulatory protein MarR; KEGG: ade:Adeh_0754 transcriptional regulator, MarR family YP_001377988.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0755 GAF sensor signal transduction histidine kinase YP_001377989.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_3677 major facilitator family transporter YP_001377990.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ade:Adeh_0757 YbaK/prolyl-tRNA synthetase associated region YP_001377991.1 KEGG: ade:Adeh_1460 methyltransferase type 11 YP_001377992.1 PFAM: Radical SAM domain protein; KEGG: gme:Gmet_1246 radical SAM YP_001377993.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_0759 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001377994.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2416 anti-sigma-factor antagonist YP_001377995.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bxe:Bxe_B2487 anti-sigma-factor antagonist (STAS) domain protein YP_001377996.1 PFAM: ATP-binding region ATPase domain protein; KEGG: aba:Acid345_2414 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_001377997.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sus:Acid_0530 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_001377998.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sus:Acid_0531 histidine kinase YP_001377999.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_6953 sensory box histidine kinase YP_001378000.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_0760 hypothetical protein YP_001378001.1 PFAM: UspA domain protein; KEGG: ade:Adeh_0761 universal stress protein UspA YP_001378002.1 PFAM: cyclase/dehydrase; KEGG: sus:Acid_5474 cyclase/dehydrase YP_001378003.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001378004.1 PFAM: diacylglycerol kinase; KEGG: ade:Adeh_0763 diacylglycerol kinase YP_001378005.1 KEGG: ade:Adeh_0764 hypothetical protein YP_001378006.1 PFAM: Rubrerythrin; KEGG: ade:Adeh_0765 rubrerythrin YP_001378007.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ade:Adeh_0766 hypothetical protein YP_001378008.1 KEGG: ade:Adeh_0767 hypothetical protein YP_001378009.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: ade:Adeh_0768 exonuclease YP_001378010.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: ade:Adeh_3041 peptidase C56, PfpI YP_001378011.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001378012.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: ade:Adeh_0770 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001378013.1 KEGG: ade:Adeh_2953 hypothetical protein YP_001378014.1 PFAM: adenylylsulfate kinase; KEGG: ade:Adeh_0771 adenylylsulfate kinase YP_001378015.1 KEGG: ade:Adeh_0772 hypothetical protein YP_001378016.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: ade:Adeh_0773 prolipoprotein diacylglyceryl transferase YP_001378017.1 KEGG: ade:Adeh_0774 heat shock protein DnaJ-like YP_001378018.1 KEGG: ade:Adeh_0775 hypothetical protein YP_001378019.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0776 response regulator receiver domain protein (CheY-like) YP_001378020.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: ade:Adeh_0777 NAD-dependent epimerase/dehydratase YP_001378021.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ade:Adeh_0778 hypothetical protein YP_001378022.1 KEGG: ade:Adeh_0779 hypothetical protein YP_001378023.1 PFAM: putative RNA methylase; methyltransferase small; KEGG: ade:Adeh_0780 methyltransferase YP_001378024.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_001378025.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ade:Adeh_0782 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase YP_001378026.1 PFAM: protein of unknown function DUF72; KEGG: ade:Adeh_0783 protein of unknown function DUF72 YP_001378027.1 TIGRFAM: DNA ligase D; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: ade:Adeh_0784 ATP dependent DNA ligase YP_001378028.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_0787 ATP-dependent helicase HrpB YP_001378029.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gsu:GSU1298 methyl-accepting chemotaxis protein YP_001378030.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_0789 AAA ATPase YP_001378031.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: ade:Adeh_0790 ATP-dependent Clp protease adaptor protein ClpS YP_001378032.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys YP_001378033.1 KEGG: ade:Adeh_0793 hypothetical protein YP_001378034.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ade:Adeh_0794 sigma-24 (FecI-like) YP_001378035.1 KEGG: ade:Adeh_0795 hypothetical protein YP_001378036.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_0796 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001378037.1 PFAM: Polysulphide reductase NrfD; KEGG: ade:Adeh_0797 polysulphide reductase, NrfD YP_001378038.1 KEGG: ade:Adeh_0798 conserved hypothetical protein-transmembrane prediction YP_001378039.1 KEGG: ade:Adeh_0799 hypothetical protein YP_001378040.1 KEGG: ade:Adeh_0800 hypothetical protein YP_001378041.1 KEGG: ade:Adeh_0801 hypothetical protein YP_001378042.1 KEGG: ade:Adeh_0802 SCO1/SenC family protein YP_001378043.1 TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: ade:Adeh_0803 cytochrome c oxidase, subunit II YP_001378044.1 TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: ade:Adeh_0804 cytochrome-c oxidase YP_001378045.1 PFAM: cytochrome c oxidase subunit III; KEGG: ade:Adeh_0805 cytochrome c oxidase, subunit III YP_001378046.1 TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: ade:Adeh_0806 Caa(3)-type oxidase, subunit IV YP_001378047.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: ade:Adeh_0812 two component, sigma54 specific, transcriptional regulator, fis family YP_001378048.1 KEGG: ade:Adeh_0815 hypothetical protein YP_001378049.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ade:Adeh_0817 glutamate synthase (ferredoxin) YP_001378050.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_0818 glutamate synthase, NADH/NADPH, small subunit YP_001378051.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_2262 protein of unknown function DUF6, transmembrane YP_001378052.1 PFAM: protein of unknown function DUF748; KEGG: ade:Adeh_3490 protein of unknown function DUF748 YP_001378053.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_0820 major facilitator superfamily MFS_1 transporter YP_001378054.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_0821 molybdenum cofactor biosynthesis protein A YP_001378055.1 PFAM: Polysulphide reductase NrfD; KEGG: ade:Adeh_0822 polysulphide reductase, NrfD YP_001378056.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_0823 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001378057.1 PFAM: molydopterin dinucleotide-binding region; KEGG: ade:Adeh_0824 formate dehydrogenase YP_001378058.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: ade:Adeh_0825 molybdopterin oxidoreductase Fe4s4 region YP_001378059.1 KEGG: ade:Adeh_0827 superfamily I DNA and RNA helicase-like YP_001378060.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ade:Adeh_0828 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001378061.1 PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: ade:Adeh_1459 hypothetical protein YP_001378062.1 KEGG: mxa:MXAN_0857 putative lipoprotein YP_001378063.1 TIGRFAM: TonB family protein; PFAM: TonB-dependent receptor; Gram-negative tonB protein; KEGG: mxa:MXAN_0856 TonB family protein YP_001378064.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mxa:MXAN_0820 ferric siderophore transporter, periplasmic energy transduction protein TonB YP_001378065.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mxa:MXAN_6484 transport energizing protein, ExbD/TolR family YP_001378066.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mxa:MXAN_0818 MotA/TolQ/ExbB proton channel family protein YP_001378067.1 KEGG: mxa:MXAN_0823 ICE-like protease (caspase) p20 domain protein YP_001378068.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: mxa:MXAN_0233 RNA polymerase sigma-70 factor, group 3 YP_001378069.1 KEGG: mxa:MXAN_4885 hypothetical protein YP_001378070.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mxa:MXAN_0823 ICE-like protease (caspase) p20 domain protein YP_001378071.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_0830 ABC transporter, duplicated ATPase subunits YP_001378072.1 KEGG: ade:Adeh_2913 hypothetical protein YP_001378073.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ade:Adeh_2914 two component transcriptional regulator, winged helix family YP_001378074.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2915 periplasmic sensor signal transduction histidine kinase YP_001378076.1 PFAM: protein of unknown function DUF1470; KEGG: ade:Adeh_3376 protein of unknown function DUF1470 YP_001378077.1 PFAM: regulatory protein TetR; KEGG: nfa:nfa24030 putative transcriptional regulator YP_001378078.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mkm:Mkms_0776 short-chain dehydrogenase/reductase SDR YP_001378080.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: ade:Adeh_0831 delta-1-pyrroline-5-carboxylate dehydrogenase YP_001378081.1 KEGG: ade:Adeh_0832 hypothetical protein YP_001378082.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0833 two component, sigma54 specific, transcriptional regulator, fis family YP_001378083.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0834 periplasmic sensor signal transduction histidine kinase YP_001378084.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_3110 outer membrane efflux protein YP_001378085.1 PFAM: secretion protein HlyD family protein; KEGG: ade:Adeh_3111 secretion protein HlyD YP_001378086.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3112 ABC transporter, ATPase subunit YP_001378087.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3113 ABC transporter, ATPase subunit YP_001378088.1 PFAM: ABC-2 type transporter; KEGG: ade:Adeh_3114 ABC transporter, inner membrane subunit YP_001378089.1 PFAM: ABC-2 type transporter; KEGG: ade:Adeh_3115 ABC transporter, inner membrane subunit YP_001378090.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_0835 ABC transporter, ATPase subunit YP_001378091.1 PFAM: ABC-2 type transporter; KEGG: ade:Adeh_0836 ABC transporter, inner membrane subunit YP_001378092.1 KEGG: ade:Adeh_0837 hypothetical protein YP_001378093.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_0838 ATP-dependent DNA helicase, RecQ family YP_001378094.1 KEGG: ade:Adeh_0841 hypothetical protein YP_001378095.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; FeS assembly SUF system regulator Rtf2 type; PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: ade:Adeh_0842 transcriptional regulator, BadM/Rrf2 family YP_001378096.1 with SufCD activates cysteine desulfurase SufS YP_001378097.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_0844 FeS assembly ATPase SufC YP_001378098.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: ade:Adeh_0845 FeS assembly protein SufD YP_001378099.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ade:Adeh_0846 cysteine desulfurase, SufS subfamily YP_001378100.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: ade:Adeh_0847 SUF system FeS assembly protein YP_001378101.1 PFAM: protein of unknown function DUF59; KEGG: ade:Adeh_0848 protein of unknown function DUF59 YP_001378102.1 PFAM: Forkhead-associated protein; KEGG: ade:Adeh_0849 FHA domain containing protein YP_001378103.1 KEGG: ade:Adeh_0851 hypothetical protein YP_001378104.1 PFAM: PDZ/DHR/GLGF domain protein; KEGG: ade:Adeh_0852 hypothetical protein YP_001378105.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ade:Adeh_0855 peptidase S1 and S6, chymotrypsin/Hap YP_001378106.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: ade:Adeh_0856 PDZ/DHR/GLGF YP_001378107.1 KEGG: cme:CMI070C similar to syntaxin binding protein Pfam: Toxin_5 EGF_2 DAP10 Sec1 Glycos_transf_2 Herpes_BLRF2 PROSITE: EGF_1 EGF_2 ARG_RICH PRO_RICH SER_RICH THR_RICH YP_001378108.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ade:Adeh_0857 two component transcriptional regulator, LuxR family YP_001378109.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ade:Adeh_0858 FMN-binding pyridoxamine 5'-phosphate oxidase-related protein protein YP_001378110.1 PFAM: translation initiation factor SUI1; KEGG: ade:Adeh_0860 translation initiation factor SUI1 YP_001378111.1 PFAM: TfuA domain protein core; KEGG: ade:Adeh_0861 TfuA-like protein YP_001378112.1 PFAM: protein of unknown function DUF181; KEGG: ade:Adeh_0862 protein of unknown function DUF181 YP_001378113.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ade:Adeh_0863 peptidase M20 YP_001378114.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; KEGG: ade:Adeh_0864 glycogen/starch/alpha-glucan phosphorylase YP_001378115.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: ade:Adeh_0865 methylated-DNA-(protein)-cysteine S-methyltransferase YP_001378116.1 KEGG: ade:Adeh_0866 hypothetical protein YP_001378117.1 PFAM: LemA family protein; KEGG: ade:Adeh_0867 LemA YP_001378118.1 PFAM: protein of unknown function DUF477; KEGG: ade:Adeh_0868 protein of unknown function DUF477 YP_001378119.1 PFAM: protein of unknown function DUF477; KEGG: ade:Adeh_0869 protein of unknown function DUF477 YP_001378120.1 PFAM: TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: ade:Adeh_0870 sodium/hydrogen exchanger YP_001378121.1 PFAM: Radical SAM domain protein; KEGG: ade:Adeh_0871 radical SAM YP_001378122.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: ade:Adeh_0872 transcriptional regulator, XRE family with cupin sensor domain YP_001378123.1 PFAM: response regulator receiver; General secretory system II protein E domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0873 response regulator receiver domain protein (CheY-like) YP_001378125.1 KEGG: ade:Adeh_0874 hypothetical protein YP_001378126.1 PFAM: OmpA/MotB domain protein; KEGG: ade:Adeh_0879 outer membrane protein, OmpA/MotB family YP_001378127.1 PFAM: protein of unknown function DUF107; KEGG: ade:Adeh_0880 protein of unknown function DUF107 YP_001378128.1 PFAM: band 7 protein; KEGG: ade:Adeh_0881 membrane protease YP_001378129.1 KEGG: ade:Adeh_0882 hypothetical protein YP_001378130.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0883 TPR repeat protein YP_001378131.1 TIGRFAM: Ku family containing protein; PFAM: Ku domain protein; KEGG: reu:Reut_B4423 Ku YP_001378132.1 TIGRFAM: DNA ligase D; DNA ligase D 3'-phosphoesterase domain; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: pcu:pc1833 hypothetical protein YP_001378133.1 KEGG: ade:Adeh_0885 hypothetical protein YP_001378134.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ade:Adeh_0887 MscS mechanosensitive ion channel YP_001378135.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0888 tetratricopeptide repeat protein YP_001378137.1 PFAM: protein of unknown function DUF420; KEGG: ade:Adeh_0898 protein of unknown function DUF420 YP_001378138.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: ade:Adeh_0900 ABC transporter, ATPase subunit YP_001378139.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: ade:Adeh_0901 protoheme IX farnesyltransferase YP_001378140.1 KEGG: mxa:MXAN_5315 putative lipoprotein YP_001378141.1 KEGG: ade:Adeh_0902 hypothetical protein YP_001378142.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs YP_001378143.1 TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ade:Adeh_0904 deoxyribose-phosphate aldolase YP_001378144.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose YP_001378145.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: xcv:XCV0270 putative aminopeptidase precursor YP_001378146.1 KEGG: gme:Gmet_0142 hypothetical protein YP_001378147.1 KEGG: ade:Adeh_0907 hypothetical protein YP_001378148.1 PFAM: cytochrome c552; KEGG: ade:Adeh_0910 nitrite reductase (cytochrome; ammonia-forming) YP_001378149.1 KEGG: ade:Adeh_0911 cytochrome c-type protein YP_001378150.1 KEGG: ade:Adeh_0915 hypothetical protein YP_001378151.1 KEGG: ade:Adeh_0916 putative anti-sigma regulatory factor (serine/threonine protein kinase) YP_001378152.1 PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ade:Adeh_0917 serine phosphatase YP_001378153.1 KEGG: ade:Adeh_0918 hypothetical protein YP_001378154.1 KEGG: ade:Adeh_0919 hypothetical protein YP_001378155.1 KEGG: ade:Adeh_0920 hypothetical protein YP_001378156.1 KEGG: gme:Gmet_0910 hypothetical protein YP_001378157.1 PFAM: cytochrome c552; KEGG: ade:Adeh_0910 nitrite reductase (cytochrome; ammonia-forming) YP_001378158.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0922 two component, sigma54 specific, transcriptional regulator, fis family YP_001378159.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ade:Adeh_0923 multi-sensor signal transduction histidine kinase YP_001378160.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ade:Adeh_0924 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001378161.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_0925 AMP-dependent synthetase and ligase YP_001378162.1 KEGG: ade:Adeh_0926 hypothetical protein YP_001378163.1 PFAM: protein of unknown function UPF0047; KEGG: ade:Adeh_0927 protein of unknown function UPF0047 YP_001378164.1 KEGG: ade:Adeh_0928 adventurous gliding motility protein R YP_001378165.1 KEGG: ade:Adeh_0929 chromosome partitioning-like ATPase YP_001378166.1 KEGG: mxa:MXAN_5816 hypothetical protein YP_001378167.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ade:Adeh_0930 cobyrinic acid a,c-diamide synthase YP_001378168.1 PFAM: PHA accumulation regulator DNA-binding protein; KEGG: ade:Adeh_0934 PHA accumulation regulator DNA-binding-like YP_001378169.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: ade:Adeh_0935 zinc finger/thioredoxin putative YP_001378170.1 KEGG: ade:Adeh_0936 hypothetical protein YP_001378171.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ade:Adeh_0937 glycerophosphoryl diester phosphodiesterase YP_001378172.1 KEGG: mxa:MXAN_5809 hypothetical protein YP_001378173.1 KEGG: ade:Adeh_0938 hypothetical protein YP_001378174.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: ade:Adeh_0939 cytochrome bd ubiquinol oxidase, subunit I YP_001378175.1 PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: ade:Adeh_0940 cytochrome bd ubiquinol oxidase, subunit II YP_001378176.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ade:Adeh_0942 threonine aldolase YP_001378177.1 PFAM: protein of unknown function DUF255; KEGG: ade:Adeh_0943 protein of unknown function DUF255 YP_001378178.1 KEGG: ade:Adeh_0945 hypothetical protein YP_001378179.1 PFAM: protein of unknown function UPF0027; KEGG: ade:Adeh_0946 protein of unknown function UPF0027 YP_001378180.1 PFAM: protein of unknown function DUF101; KEGG: ade:Adeh_0947 hypothetical protein YP_001378181.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ade:Adeh_0948 MATE efflux family protein YP_001378182.1 PFAM: K potassium transporter; KEGG: ade:Adeh_0949 K+ potassium transporter YP_001378183.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: ade:Adeh_0950 hypothetical protein YP_001378184.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2797 drug resistance transporter EmrB/QacA subfamily YP_001378185.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; KEGG: ade:Adeh_0951 crossover junction endodeoxyribonuclease RuvC YP_001378186.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: ade:Adeh_0952 Holliday junction DNA helicase RuvA YP_001378187.1 SMART: HNH nuclease; KEGG: ade:Adeh_2806 HNH endonuclease YP_001378188.1 KEGG: ade:Adeh_0244 LigA YP_001378189.1 KEGG: ade:Adeh_2481 hypothetical protein YP_001378190.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_001378191.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_0859 HNH nuclease YP_001378193.1 PFAM: Rhomboid family protein; KEGG: ade:Adeh_0954 rhomboid-like protein YP_001378194.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001378195.1 KEGG: mxa:MXAN_6917 hypothetical protein YP_001378196.1 PFAM: cyclase/dehydrase; KEGG: ade:Adeh_0957 cyclase/dehydrase YP_001378197.1 KEGG: ade:Adeh_0959 hypothetical protein YP_001378198.1 KEGG: ade:Adeh_0960 hypothetical protein YP_001378199.1 PFAM: protein of unknown function DUF1469; KEGG: ade:Adeh_0961 protein of unknown function DUF1469 YP_001378200.1 TIGRFAM: DNA polymerase LigD polymerase domain; PFAM: DNA primase small subunit; KEGG: ade:Adeh_0962 hypothetical protein YP_001378201.1 TIGRFAM: Ku family containing protein; PFAM: Ku domain protein; KEGG: ade:Adeh_0963 Ku YP_001378202.1 KEGG: ade:Adeh_2659 hypothetical protein YP_001378203.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: ade:Adeh_0965 acetyl-CoA hydrolase/transferase YP_001378204.1 PFAM: protein of unknown function DUF81; KEGG: ade:Adeh_0966 protein of unknown function DUF81 YP_001378205.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0967 response regulator receiver domain protein (CheY-like) YP_001378206.1 PFAM: protein of unknown function DUF541; KEGG: ade:Adeh_2073 protein of unknown function DUF541 YP_001378207.1 PFAM: phosphoribosyltransferase; KEGG: fra:Francci3_3987 phosphoribosyltransferase YP_001378208.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: tcx:Tcr_0943 copper-translocating P-type ATPase YP_001378209.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2240 periplasmic sensor signal transduction histidine kinase YP_001378210.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_2239 two component, sigma54 specific, transcriptional regulator, fis family YP_001378211.1 KEGG: ade:Adeh_2235 hypothetical protein YP_001378212.1 KEGG: ade:Adeh_3100 hypothetical protein YP_001378213.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_3099 transcriptional regulator, TetR family YP_001378214.1 KEGG: mxa:MXAN_2623 hypothetical protein YP_001378215.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_2238 outer membrane efflux protein YP_001378216.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ade:Adeh_2237 secretion protein HlyD YP_001378217.1 PFAM: acriflavin resistance protein; KEGG: ade:Adeh_2236 acriflavin resistance protein YP_001378218.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: ade:Adeh_0043 transcriptional regulator, GntR family YP_001378220.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2240 periplasmic sensor signal transduction histidine kinase YP_001378221.1 PFAM: sulfatase; KEGG: bcl:ABC3293 phosphoglycerol transferase YP_001378222.1 PFAM: UspA domain protein; KEGG: sru:SRU_1736 universal stress protein YP_001378223.1 PFAM: glucose sorbosone dehydrogenase; KEGG: mxa:MXAN_2188 putative lipoprotein YP_001378224.1 KEGG: ade:Adeh_2269 hypothetical protein YP_001378225.1 PFAM: Spermine synthase; KEGG: mxa:MXAN_5122 spermine/spermidine synthase family protein YP_001378226.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; KEGG: mxa:MXAN_6955 sensory box histidine kinase TodK YP_001378227.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sye:Syncc9902_1114 hypothetical protein YP_001378228.1 KEGG: ade:Adeh_3804 hypothetical protein YP_001378229.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: mca:MCA0235 nitrogenase molybdenum-iron protein NifX YP_001378230.1 KEGG: ade:Adeh_0986 zinc finger, UBP-type YP_001378231.1 KEGG: mxa:MXAN_6257 hypothetical protein YP_001378232.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A4300 transcriptional regulator, TetR family YP_001378233.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ade:Adeh_3183 signal transduction histidine kinase YP_001378234.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: lip:LI0774 K+ transport systems, NAD-binding component YP_001378235.1 PFAM: cation transporter; KEGG: hma:rrnAC0755 TRK potassium uptake system protein YP_001378236.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tbd:Tbd_1359 ABC transporter ATPase YP_001378237.1 PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1242 protein of unknown function DUF214 YP_001378238.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA6248 hypothetical protein YP_001378239.1 PFAM: regulatory protein TetR; KEGG: eba:ebA6247 transcriptional regulator, TetR family YP_001378240.1 KEGG: sfu:Sfum_0282 hypothetical protein YP_001378241.1 KEGG: gme:Gmet_1723 hypothetical protein YP_001378242.1 KEGG: rha:RHA1_ro00637 hypothetical protein YP_001378243.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sus:Acid_4265 alcohol dehydrogenase, zinc-binding domain protein YP_001378244.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: ade:Adeh_2153 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001378246.1 KEGG: msm:MSMEG_4410 hypothetical protein YP_001378247.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: aba:Acid345_3726 oxidoreductase FAD-binding region YP_001378248.1 PFAM: oxidoreductase molybdopterin binding; KEGG: fal:FRAAL4914 conserved hypothetical protein; putative sulfite dehydrogenase YP_001378249.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH02689 putative glyoxalase protein YP_001378250.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: rle:RL2911 putative hydrolase YP_001378251.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMb20216 putative epoxide hydrolase protein YP_001378253.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase; KEGG: sus:Acid_2052 transcriptional regulator, NifA subfamily, fis family YP_001378254.1 PFAM: Domain of unknown function DUF1801; KEGG: reh:H16_B0885 hypothetical protein YP_001378255.1 KEGG: sus:Acid_3038 hypothetical protein YP_001378256.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ade:Adeh_1211 hypothetical protein YP_001378257.1 PFAM: regulatory protein ArsR; KEGG: ade:Adeh_1210 transcriptional regulator, ArsR family YP_001378258.1 KEGG: mxa:MXAN_6147 hypothetical protein YP_001378259.1 KEGG: bcl:ABC3474 hypothetical protein YP_001378260.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: ade:Adeh_3222 hypothetical protein YP_001378262.1 PFAM: Domain of unknown function DUF1814; KEGG: ade:Adeh_3282 hypothetical protein YP_001378263.1 KEGG: ade:Adeh_3281 hypothetical protein YP_001378264.1 KEGG: sma:SAV7222 hypothetical protein YP_001378265.1 KEGG: sma:SAV7223 hypothetical protein YP_001378266.1 KEGG: sma:SAV7224 hypothetical protein YP_001378267.1 KEGG: nfa:nfa44350 hypothetical protein YP_001378268.1 PFAM: transposase mutator type; KEGG: bja:bll2163 putative transposase YP_001378269.1 KEGG: pin:Ping_0338 hypothetical protein YP_001378272.1 PFAM: phage integrase family protein; KEGG: ajs:Ajs_0927 phage integrase family protein YP_001378273.1 PFAM: Prophage CP4-57 regulatory; KEGG: aeh:Mlg_0638 phage transcriptional regulator, AlpA YP_001378274.1 KEGG: cya:CYA_2262 protein kinase YP_001378276.1 PFAM: restriction endonuclease; KEGG: ade:Adeh_3544 restriction endonuclease YP_001378277.1 KEGG: xcb:XC_2401 hypothetical protein YP_001378280.1 PFAM: isochorismatase hydrolase; KEGG: ade:Adeh_1040 isochorismatase hydrolase YP_001378281.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sfu:Sfum_0296 thiamine pyrophosphate enzyme TPP binding domain protein YP_001378282.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_1041 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001378283.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_1042 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001378285.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ade:Adeh_1043 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001378286.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; KEGG: mxa:MXAN_2976 tyrosyl-tRNA synthetase YP_001378287.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_1045 metallophosphoesterase YP_001378288.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ade:Adeh_1046 5-formyltetrahydrofolate cyclo-ligase YP_001378289.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_1047 serine/threonine protein kinase YP_001378290.1 PFAM: aminotransferase class V; KEGG: ade:Adeh_1048 aminotransferase, class V YP_001378291.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: ade:Adeh_1049 phosphoesterase, RecJ-like YP_001378292.1 KEGG: ade:Adeh_1050 apurinic endonuclease (APN1); TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2 YP_001378293.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: ade:Adeh_1051 filamentation induced by cAMP protein Fic YP_001378294.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: ade:Adeh_1052 branched-chain amino acid aminotransferase YP_001378295.1 PFAM: Patatin; KEGG: ade:Adeh_1053 patatin YP_001378296.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: ade:Adeh_1054 glutamate-ammonia-ligase adenylyltransferase YP_001378297.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: ade:Adeh_1055 two component, sigma54 specific, transcriptional regulator, fis family YP_001378298.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ade:Adeh_1056 glycogen debranching enzyme GlgX YP_001378299.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_1064 glycosyl transferase, group 1 YP_001378300.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: ade:Adeh_1069 heat shock sigma factor YP_001378301.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: ade:Adeh_1070 short-chain dehydrogenase/reductase SDR YP_001378302.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1071 periplasmic sensor signal transduction histidine kinase YP_001378303.1 KEGG: ade:Adeh_1072 hypothetical protein YP_001378304.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ade:Adeh_1073 surface antigen (D15) YP_001378305.1 PFAM: protein kinase; heat shock protein DnaJ domain protein; type IV pilus assembly PilZ; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_1074 serine/threonine protein kinase YP_001378306.1 KEGG: ade:Adeh_1075 hypothetical protein YP_001378307.1 PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: ade:Adeh_1076 glycoside hydrolase, family 57 YP_001378308.1 KEGG: rno:687525 hypothetical protein LOC687525 YP_001378309.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: ade:Adeh_1078 lysyl-tRNA synthetase YP_001378310.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_1079 protein of unknown function DUF214 YP_001378311.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_4729 lipoprotein releasing system, ATP-binding protein LolD YP_001378312.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ade:Adeh_1081 surface antigen (D15) YP_001378313.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: ade:Adeh_1082 outer membrane chaperone Skp (OmpH) YP_001378314.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: ade:Adeh_1083 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_001378315.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_001378316.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_001378317.1 PFAM: protein of unknown function DUF1009; KEGG: ade:Adeh_1086 protein of unknown function DUF1009 YP_001378318.1 PFAM: protein of unknown function DUF167; KEGG: ade:Adeh_1087 protein of unknown function DUF167 YP_001378320.1 TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: ade:Adeh_1088 uroporphyrinogen decarboxylase YP_001378321.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001378322.1 PFAM: ferrochelatase; KEGG: ade:Adeh_1090 ferrochelatase YP_001378323.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; sucrose-6F-phosphate phosphohydrolase; KEGG: ade:Adeh_1092 trehalose-phosphatase YP_001378324.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: ade:Adeh_1093 exodeoxyribonuclease VII, large subunit YP_001378325.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: ade:Adeh_1094 exonuclease VII, small subunit YP_001378326.1 PFAM: response regulator receiver; KEGG: ade:Adeh_1095 response regulator receiver domain protein (CheY-like) YP_001378327.1 PFAM: Polyprenyl synthetase; KEGG: ade:Adeh_1096 polyprenyl synthetase YP_001378328.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: ade:Adeh_1097 deoxyxylulose-5-phosphate synthase YP_001378329.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: ade:Adeh_1098 hemolysin A YP_001378330.1 PFAM: protein of unknown function DUF150; KEGG: ade:Adeh_1099 hypothetical protein YP_001378331.1 TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; KEGG: ade:Adeh_1100 NusA antitermination factor YP_001378332.1 PFAM: protein of unknown function DUF448; KEGG: ade:Adeh_1101 protein of unknown function DUF448 YP_001378333.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_001378334.1 PFAM: protein of unknown function DUF503; KEGG: ade:Adeh_1103 protein of unknown function DUF503 YP_001378335.1 PFAM: ribosome-binding factor A; KEGG: ade:Adeh_1104 ribosome-binding factor A YP_001378336.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: ade:Adeh_1105 tRNA pseudouridine synthase B YP_001378337.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_001378338.1 PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 2 domain protein; KH type 1 domain protein; SMART: KH domain protein; KEGG: ade:Adeh_1107 polyribonucleotide nucleotidyltransferase YP_001378339.1 catalyzes the formation of dUMP from dUTP YP_001378340.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_001378341.1 KEGG: ade:Adeh_1110 hypothetical protein YP_001378342.1 KEGG: ade:Adeh_0320 BioH protein, putative YP_001378343.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001378344.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ade:Adeh_1113 tRNA/rRNA methyltransferase, SpoU YP_001378345.1 KEGG: ade:Adeh_1114 hypothetical protein YP_001378346.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ade:Adeh_1115 peptidase S1 and S6, chymotrypsin/Hap YP_001378347.1 KEGG: ade:Adeh_1116 hypothetical protein YP_001378348.1 TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ade:Adeh_1117 phosphoglycolate phosphatase YP_001378349.1 PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: mxa:MXAN_2090 OmpA domain protein YP_001378350.1 PFAM: histidine kinase HAMP region domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: ade:Adeh_1118 metal dependent phosphohydrolase YP_001378351.1 PFAM: response regulator receiver; KEGG: ade:Adeh_1119 response regulator receiver domain protein (CheY-like) YP_001378352.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; KEGG: ade:Adeh_1120 molybdopterin biosynthesis MoaE / thiamineS YP_001378353.1 TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: ade:Adeh_1121 peptidase M50, putative membrane-associated zinc metallopeptidase YP_001378354.1 PFAM: AMMECR1 domain protein; KEGG: ade:Adeh_1122 AMMECR1 YP_001378355.1 PFAM: NUDIX hydrolase; KEGG: ade:Adeh_1123 NUDIX hydrolase YP_001378356.1 KEGG: ade:Adeh_1124 hypothetical protein YP_001378358.1 PFAM: carbonic anhydrase; KEGG: ade:Adeh_1125 carbonic anhydrase YP_001378359.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: nmu:Nmul_A1712 phospholipase D/transphosphatidylase YP_001378360.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ade:Adeh_2798 glyoxalase/bleomycin resistance protein/dioxygenase YP_001378361.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: ade:Adeh_2055 oligoendopeptidase F YP_001378362.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: ade:Adeh_1127 excinuclease ABC, A subunit YP_001378363.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_1128 protein of unknown function DUF6, transmembrane YP_001378364.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_1129 protein of unknown function DUF6, transmembrane YP_001378365.1 PFAM: Extracellular ligand-binding receptor; KEGG: reu:Reut_D6487 extracellular ligand-binding receptor YP_001378366.1 PFAM: inner-membrane translocator; KEGG: rru:Rru_A0584 inner-membrane translocator YP_001378367.1 PFAM: inner-membrane translocator; KEGG: bbr:BB2757 permease component of ABC transporter protein YP_001378368.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2758 ATP-binding component of ABC transporter protein YP_001378369.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb1475 ABC-type branched-chain amino acid transport systems YP_001378370.1 KEGG: ade:Adeh_1131 putative lipoprotein transmembrane YP_001378371.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_1132 acyl-CoA dehydrogenase, type 1 YP_001378372.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: ade:Adeh_1133 CutA1 divalent ion tolerance protein YP_001378373.1 KEGG: ade:Adeh_3090 hypothetical protein YP_001378374.1 KEGG: ade:Adeh_1134 hypothetical protein YP_001378375.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_1135 serine/threonine protein kinase YP_001378376.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: ade:Adeh_1136 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase YP_001378377.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001378378.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: ade:Adeh_1138 signal peptide peptidase SppA, 36K type YP_001378379.1 TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX; KEGG: ade:Adeh_1139 thymidylate synthase (FAD) YP_001378380.1 PFAM: thioesterase superfamily protein; KEGG: ade:Adeh_1140 thioesterase superfamily YP_001378381.1 PFAM: Forkhead-associated protein; KEGG: ade:Adeh_1142 FHA domain containing protein YP_001378382.1 KEGG: ade:Adeh_1143 aldehyde dehydrogenase YP_001378383.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_1144 metallophosphoesterase YP_001378384.1 PFAM: protein of unknown function DUF1028; Putative peptidoglycan binding; KEGG: ade:Adeh_1145 hypothetical protein YP_001378385.1 PFAM: helix-turn-helix domain protein; KEGG: ade:Adeh_1147 transcriptional regulator, XRE family YP_001378386.1 KEGG: dde:Dde_0305 AhpC/TSA family protein YP_001378387.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ade:Adeh_1148 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001378388.1 KEGG: ade:Adeh_1149 hypothetical protein YP_001378389.1 KEGG: ade:Adeh_1150 hypothetical protein YP_001378390.1 KEGG: ade:Adeh_1151 hypothetical protein YP_001378391.1 KEGG: ade:Adeh_1152 hypothetical protein YP_001378392.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: ade:Adeh_1153 channel protein, hemolysin III family YP_001378393.1 KEGG: ade:Adeh_1154 GTPase-like YP_001378394.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nca:Noca_1645 haloacid dehalogenase, type II YP_001378395.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; KEGG: ade:Adeh_1156 arginine biosynthesis bifunctional protein ArgJ YP_001378396.1 KEGG: ade:Adeh_1158 mucin-associated surface protein (MASP), putative YP_001378397.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_A2350 methylase involved in ubiquinone/menaquinone biosynthesis-like YP_001378398.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: lil:LA2661 3-demethylubiquinone-9 3-methyltransferase-like protein YP_001378400.1 KEGG: ade:Adeh_2790 hypothetical protein YP_001378401.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mta:Moth_2277 thiamine pyrophosphate enzyme YP_001378402.1 KEGG: ade:Adeh_1163 hypothetical protein YP_001378403.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: ade:Adeh_1164 NAD-dependent epimerase/dehydratase YP_001378404.1 PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility domain; KEGG: ade:Adeh_1165 long-chain-fatty-acid CoA ligase YP_001378405.1 KEGG: ade:Adeh_1166 hypothetical protein YP_001378406.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ade:Adeh_1167 HAD-superfamily subfamily IB, PSPase-like YP_001378407.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: ade:Adeh_1168 NAD-dependent epimerase/dehydratase YP_001378408.1 KEGG: ade:Adeh_1169 hypothetical protein YP_001378409.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ade:Adeh_1170 formate dehydrogenase YP_001378410.1 PFAM: cytochrome c oxidase subunit I; KEGG: ade:Adeh_1171 cytochrome c oxidase, subunit I YP_001378411.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome c class I; cytochrome C oxidase mono-heme subunit/FixO; KEGG: ade:Adeh_1172 cytochrome c oxidase, mono-heme subunit/FixO YP_001378412.1 KEGG: ade:Adeh_1173 hypothetical protein YP_001378414.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_1174 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001378415.1 KEGG: ade:Adeh_1175 hypothetical protein YP_001378416.1 KEGG: ade:Adeh_1176 hypothetical protein YP_001378417.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ade:Adeh_1177 copper-translocating P-type ATPase YP_001378418.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: ade:Adeh_1178 cytochrome oxidase maturation protein, cbb3-type YP_001378419.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: fal:FRAAL5881 hypothetical protein; putative membrane protein YP_001378420.1 KEGG: pin:Ping_1434 hypothetical protein YP_001378421.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: ade:Adeh_4292 UDP-glucose 6-dehydrogenase YP_001378422.1 PFAM: glycosyl transferase group 1; KEGG: sat:SYN_01144 glycosyltransferase YP_001378423.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sat:SYN_02355 acetyltransferase YP_001378424.1 KEGG: sat:SYN_01153 hypothetical cytosolic protein YP_001378425.1 PFAM: Ig domain protein group 2 domain protein; KEGG: ade:Adeh_1208 calcium-binding outer membrane-like protein YP_001378427.1 KEGG: rru:Rru_A1443 hypothetical protein YP_001378428.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: ppd:Ppro_1424 polysaccharide biosynthesis protein YP_001378429.1 KEGG: sus:Acid_5490 hypothetical protein YP_001378430.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_4300 glycosyl transferase, family 2 YP_001378431.1 PFAM: glycosyl transferase family 2; KEGG: ret:RHE_CH00755 putative glycosyl/methyltransferase hybrid protein YP_001378432.1 KEGG: plt:Plut_1851 hypothetical protein YP_001378433.1 PFAM: glycosyl transferase group 1; KEGG: ava:Ava_1379 glycosyl transferase, group 1 YP_001378435.1 PFAM: sugar transferase; KEGG: pca:Pcar_1533 sugar transferase YP_001378436.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aba:Acid345_3300 DegT/DnrJ/EryC1/StrS aminotransferase YP_001378438.1 KEGG: ade:Adeh_2790 hypothetical protein YP_001378439.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: ade:Adeh_2789 asparagine synthase, glutamine-hydrolyzing YP_001378440.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001378441.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_2785 AMP-dependent synthetase and ligase YP_001378442.1 PFAM: UBA/THIF-type NAD/FAD binding protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: cth:Cthe_2334 polysaccharide biosynthesis protein CapD YP_001378443.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ade:Adeh_4274 tyrosine kinase YP_001378444.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate YP_001378445.1 KEGG: mxa:MXAN_1008 hypothetical protein YP_001378446.1 KEGG: ade:Adeh_2604 hypothetical protein YP_001378447.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_2662 hydrolase, NUDIX family YP_001378449.1 KEGG: ade:Adeh_2603 hypothetical protein YP_001378450.1 catalyzes the formation of fumarate from aspartate YP_001378451.1 PFAM: General secretory system II protein E domain protein; KEGG: mxa:MXAN_4436 general secretory system II protein E, N-terminal domain protein YP_001378452.1 KEGG: ade:Adeh_2601 hypothetical protein YP_001378453.1 KEGG: ade:Adeh_2600 hypothetical protein YP_001378454.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: dde:Dde_1169 peptidase C56, PfpI YP_001378455.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001378456.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_001378457.1 KEGG: ade:Adeh_2596 hypothetical protein YP_001378458.1 PFAM: peptidase M10A and M12B matrixin and adamalysin; KEGG: ade:Adeh_2595 LigA YP_001378459.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_3196 bifunctional deaminase-reductase-like YP_001378460.1 PFAM: protein of unknown function DUF52; KEGG: ade:Adeh_2594 protein of unknown function DUF52 YP_001378461.1 PFAM: Abortive infection protein; KEGG: ade:Adeh_2591 abortive infection protein YP_001378462.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_001378463.1 KEGG: ade:Adeh_2589 glutamine amidotransferase, class-II YP_001378464.1 PFAM: Heat shock protein 70; KEGG: ade:Adeh_2588 heat shock protein 70 YP_001378465.1 PFAM: heat shock protein DnaJ domain protein; KEGG: ade:Adeh_2587 heat shock protein DnaJ-like YP_001378466.1 PFAM: Colicin V production protein; KEGG: sal:Sala_1805 colicin V production protein YP_001378467.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ade:Adeh_2584 arginase/agmatinase/formiminoglutamase YP_001378468.1 transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine YP_001378469.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ade:Adeh_2583 transcriptional regulator, BadM/Rrf2 family YP_001378470.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ade:Adeh_2582 phosphoesterase, PHP-like YP_001378471.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_2581 proton-translocating NADH-quinone oxidoreductase, chain N YP_001378472.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_2580 proton-translocating NADH-quinone oxidoreductase, chain M YP_001378473.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_2579 proton-translocating NADH-quinone oxidoreductase, chain L YP_001378474.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ade:Adeh_2578 NADH-ubiquinone oxidoreductase, chain 4L YP_001378475.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ade:Adeh_2577 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_001378476.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_2576 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001378477.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: ade:Adeh_2575 respiratory-chain NADH dehydrogenase, subunit 1 YP_001378478.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: ade:Adeh_2574 NADH dehydrogenase (ubiquinone) YP_001378479.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: ade:Adeh_2573 NADH (or F420H2) dehydrogenase, subunit C YP_001378480.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_001378481.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: ade:Adeh_2571 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_001378482.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: ade:Adeh_2570 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_001378483.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_001378484.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: ade:Adeh_2568 NADH (or F420H2) dehydrogenase, subunit C YP_001378485.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: ade:Adeh_2567 NADH dehydrogenase (ubiquinone) YP_001378486.1 PFAM: ferredoxin; molybdopterin oxidoreductase Fe4S4 region; KEGG: ade:Adeh_2566 ferredoxin YP_001378487.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: ade:Adeh_2565 respiratory-chain NADH dehydrogenase, subunit 1 YP_001378488.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_2564 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001378489.1 KEGG: ade:Adeh_2563 hypothetical protein YP_001378490.1 KEGG: ade:Adeh_2562 hypothetical protein YP_001378491.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_2561 major facilitator superfamily MFS_1 transporter YP_001378492.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001378493.1 KEGG: gvi:gll0371 putative transposase YP_001378494.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: ade:Adeh_2560 phosphoesterase, PHP-like YP_001378495.1 KEGG: ade:Adeh_2559 tetratricopeptide repeat protein YP_001378496.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: ade:Adeh_2558 molybdopterin binding domain YP_001378497.1 PFAM: response regulator receiver; KEGG: ade:Adeh_4116 response regulator receiver domain protein (CheY-like) YP_001378498.1 TIGRFAM: Conserved hypothetical protein CHP02757; KEGG: ade:Adeh_2557 hypothetical protein YP_001378499.1 KEGG: ade:Adeh_2556 4-amino-4-deoxy-L-arabinose transferase YP_001378500.1 PFAM: protein of unknown function DUF147; KEGG: ade:Adeh_2555 protein of unknown function DUF147 YP_001378501.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: ade:Adeh_2554 transcriptional regulator, TraR/DksA family YP_001378502.1 PFAM: protein of unknown function DUF77; KEGG: ade:Adeh_2552 protein of unknown function DUF77 YP_001378503.1 KEGG: ade:Adeh_2550 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_001378504.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: ade:Adeh_2549 YjgF-like protein YP_001378507.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: ade:Adeh_2548 protein of unknown function DUF160 YP_001378508.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: ade:Adeh_2547 protein of unknown function DUF160 YP_001378509.1 PFAM: SNARE associated Golgi protein; KEGG: gvi:glr0610 DedA family protein YP_001378510.1 TIGRFAM: SpoIID/LytB domain; PFAM: Stage II sporulation D domain protein; KEGG: ade:Adeh_2545 stage II sporulation-related protein YP_001378511.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_001378512.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_2543 hypothetical protein YP_001378513.1 TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; KEGG: ade:Adeh_2542 queuine tRNA-ribosyltransferase YP_001378514.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ade:Adeh_2541 preprotein translocase, YajC subunit YP_001378515.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: ade:Adeh_2540 protein-export membrane protein SecD YP_001378516.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: ade:Adeh_2539 SecF protein YP_001378517.1 PFAM: Auxin Efflux Carrier; KEGG: dge:Dgeo_1082 auxin efflux carrier YP_001378518.1 KEGG: rpe:RPE_0250 transposase, IS4 family protein YP_001378519.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: ade:Adeh_2536 single-stranded-DNA-specific exonuclease RecJ YP_001378520.1 KEGG: ade:Adeh_2534 hypothetical protein YP_001378521.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_001378522.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_2113 GCN5-related N-acetyltransferase YP_001378523.1 KEGG: xfa:XF1026 serine protease YP_001378524.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001378526.1 KEGG: rno:432393 keratinocytes proline-rich protein YP_001378527.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: ade:Adeh_1892 peptide methionine sulfoxide reductase YP_001378528.1 PFAM: FAD dependent oxidoreductase; KEGG: ade:Adeh_2532 FAD dependent oxidoreductase YP_001378529.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters YP_001378530.1 KEGG: ade:Adeh_2529 hypothetical protein YP_001378531.1 PFAM: diacylglycerol kinase catalytic region; KEGG: ade:Adeh_2527 hypothetical protein YP_001378532.1 KEGG: ade:Adeh_2526 hypothetical protein YP_001378533.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_2524 SNF2-related helicase-like YP_001378534.1 KEGG: ade:Adeh_3022 hypothetical protein YP_001378535.1 PFAM: peptidase M16 domain protein; KEGG: ade:Adeh_2523 peptidase M16-like YP_001378536.1 KEGG: sus:Acid_1201 hypothetical protein YP_001378537.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: ade:Adeh_2519 thiamine biosynthesis protein ThiS YP_001378538.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_001378539.1 KEGG: ade:Adeh_2517 hypothetical protein YP_001378540.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; KEGG: ade:Adeh_2516 thiamine-phosphate diphosphorylase YP_001378541.1 KEGG: bja:blr0023 putative transposase YP_001378542.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2515 methyltransferase type 11 YP_001378543.1 PFAM: DoxX family protein; KEGG: gme:Gmet_3019 methylamine utilization protein MauE, putative YP_001378544.1 SMART: Rhodanese domain protein; KEGG: gsu:GSU0505 rhodanese-like domain protein YP_001378545.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: ade:Adeh_2514 6-pyruvoyl tetrahydropterin synthase YP_001378546.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_2167 hemerythrin HHE cation binding protein YP_001378547.1 KEGG: ade:Adeh_2513 ATP-dependent nuclease subunit B-like YP_001378548.1 PFAM: UvrD/REP helicase; KEGG: ade:Adeh_2512 UvrD/REP helicase YP_001378549.1 KEGG: ade:Adeh_2511 hypothetical protein YP_001378550.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate YP_001378551.1 KEGG: ade:Adeh_2509 hypothetical protein YP_001378552.1 KEGG: ade:Adeh_2506 hypothetical protein YP_001378553.1 KEGG: ade:Adeh_2505 hypothetical protein YP_001378554.1 KEGG: ade:Adeh_2504 hypothetical protein YP_001378555.1 KEGG: mxa:MXAN_2640 hypothetical protein YP_001378556.1 PFAM: alanine racemase domain protein; KEGG: ade:Adeh_2503 protein of unknown function UPF0001 YP_001378557.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ade:Adeh_2502 maf protein YP_001378558.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ade:Adeh_2501 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001378559.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_001378560.1 KEGG: ade:Adeh_2499 hypothetical protein YP_001378561.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: ade:Adeh_2498 peptidoglycan glycosyltransferase YP_001378562.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: ade:Adeh_2497 rod shape-determining protein RodA YP_001378563.1 TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: ade:Adeh_2496 thioredoxin YP_001378564.1 PFAM: cytochrome c assembly protein; KEGG: ade:Adeh_2494 cytochrome c assembly protein YP_001378565.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_001378566.1 TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; KEGG: ade:Adeh_2492 porphobilinogen deaminase YP_001378567.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: ade:Adeh_2491 uroporphyrinogen III synthase HEM4 YP_001378568.1 KEGG: ade:Adeh_2490 hypothetical protein YP_001378569.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: ade:Adeh_2489 tRNA pseudouridine synthase D, TruD YP_001378570.1 KEGG: ade:Adeh_2488 hypothetical protein YP_001378571.1 KEGG: mxa:MXAN_3696 hypothetical protein YP_001378572.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ade:Adeh_2487 phosphoesterase, PHP-like YP_001378573.1 KEGG: ade:Adeh_2486 hypothetical protein YP_001378574.1 KEGG: ade:Adeh_2485 Em-like protein GEA1 (EM1) YP_001378575.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; KEGG: ade:Adeh_2484 ribonucleotide reductase large subunit YP_001378576.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mlo:mll4697 two-component system response regulator YP_001378577.1 KEGG: ade:Adeh_0244 LigA YP_001378578.1 TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ade:Adeh_2480 pyrroline-5-carboxylate reductase YP_001378579.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ade:Adeh_2479 FAD dependent oxidoreductase YP_001378580.1 PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_2478 ferredoxin / FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001378581.1 PFAM: metalloenzyme domain protein; KEGG: ade:Adeh_2477 metalloenzyme YP_001378582.1 KEGG: mxa:MXAN_2691 hypothetical protein YP_001378583.1 KEGG: ade:Adeh_2476 hypothetical protein YP_001378584.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ade:Adeh_2475 peptidase U62, modulator of DNA gyrase YP_001378586.1 KEGG: ade:Adeh_2472 hypothetical protein YP_001378587.1 PFAM: protein kinase; PEGA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_2471 serine/threonine protein kinase YP_001378588.1 KEGG: ade:Adeh_2470 putative transcriptional regulator, MerR family YP_001378589.1 PFAM: sigma-70 region 4 domain protein; KEGG: ade:Adeh_2469 hypothetical protein YP_001378590.1 involved in de novo purine biosynthesis YP_001378591.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_001378592.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: ade:Adeh_2466 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_001378593.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ade:Adeh_2465 permease YjgP/YjgQ YP_001378594.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ade:Adeh_2464 permease YjgP/YjgQ YP_001378595.1 KEGG: ade:Adeh_2463 hypothetical protein YP_001378596.1 PFAM: ABC-2 type transporter; KEGG: ade:Adeh_2462 ABC transporter, inner membrane subunit YP_001378597.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2461 ABC transporter, ATPase subunit YP_001378598.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2459 methyltransferase type 11 YP_001378599.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: ade:Adeh_2458 glycosyl transferase, family 2 YP_001378600.1 PFAM: glycosyl transferase group 1; KEGG: ace:Acel_0419 glycosyl transferase, group 1 YP_001378601.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ade:Adeh_2771 UDP-N-acetylglucosamine 2-epimerase YP_001378602.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_2456 glycosyl transferase, family 2 YP_001378603.1 PFAM: sugar transferase; KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase YP_001378604.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: ade:Adeh_2454 SUA5/YciO/YrdC/YwlC YP_001378605.1 PFAM: uncharacterised conserved protein UCP033563; KEGG: ade:Adeh_2453 uncharacterised conserved protein UCP033563 YP_001378606.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001378607.1 KEGG: ade:Adeh_2451 hypothetical protein YP_001378608.1 KEGG: ade:Adeh_2450 hypothetical protein YP_001378609.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; D-alanine--D-alanine ligase domain protein; KEGG: ade:Adeh_2449 D-alanine--D-alanine ligase YP_001378610.1 PFAM: peptidase S58 DmpA; KEGG: ade:Adeh_2448 peptidase S58, DmpA YP_001378611.1 KEGG: ade:Adeh_2447 hypothetical protein YP_001378612.1 KEGG: ade:Adeh_2446 hypothetical protein YP_001378613.1 KEGG: pau:PA14_24480 hypothetical protein YP_001378614.1 KEGG: pau:PA14_24480 hypothetical protein YP_001378615.1 PFAM: glycosyl transferase group 1; KEGG: mva:Mvan_5245 glycosyl transferase, group 1 YP_001378616.1 PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_0713 glycosyl transferase, group 1 YP_001378617.1 PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_3027 glycosyl transferase, group 1 YP_001378618.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: aba:Acid345_1785 NAD-dependent epimerase/dehydratase YP_001378619.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: sus:Acid_1182 aromatic-L-amino-acid decarboxylase YP_001378620.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: sde:Sde_3368 putative D,D-carboxypeptidase-related protein YP_001378621.1 KEGG: cme:CMH001C similar to hedgehog protein Pfam: Kelch_2 Kelch_1 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH YP_001378622.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001378623.1 PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: ade:Adeh_2440 biotin carboxylase-like YP_001378624.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_2796 serine/threonine protein kinase YP_001378625.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ade:Adeh_3449 sigma-24 (FecI-like) YP_001378626.1 PFAM: protein of unknown function DUF162; KEGG: ade:Adeh_2977 protein of unknown function DUF162 YP_001378627.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF162; KEGG: ade:Adeh_2976 hypothetical protein YP_001378628.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ade:Adeh_2975 protein of unknown function DUF224 YP_001378629.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ade:Adeh_2974 L-lactate transporter YP_001378630.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: ade:Adeh_2973 FAD linked oxidase-like YP_001378631.1 unknown function; when overproduced it confers drug-resistance YP_001378632.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: aha:AHA_2618 sensor histidine kinase YP_001378633.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_2438 radical SAM YP_001378634.1 PFAM: Fe(II) trafficking protein YggX; KEGG: ade:Adeh_2437 Fe(II) trafficking protein YggX YP_001378635.1 PFAM: helix-turn-helix domain protein; KEGG: ade:Adeh_2436 transcriptional regulator, XRE family YP_001378636.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ade:Adeh_2434 molybdopterin biosynthesis enzyme, MoeA YP_001378637.1 PFAM: protein of unknown function DUF124; KEGG: ade:Adeh_2433 protein of unknown function DUF124 YP_001378638.1 KEGG: ade:Adeh_2432 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein YP_001378639.1 PFAM: protein of unknown function DUF81; KEGG: ade:Adeh_2430 protein of unknown function DUF81 YP_001378640.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_0859 HNH nuclease YP_001378641.1 PFAM: CBS domain containing protein; KEGG: ade:Adeh_2429 putative signal transduction protein with CBS domains YP_001378642.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2428 ABC branched-chain amino acid transporter, ATPase subunit YP_001378643.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2427 ABC branched-chain amino acid transporter, ATPase subunit YP_001378644.1 PFAM: inner-membrane translocator; KEGG: ade:Adeh_2426 ABC branched-chain amino acid transporter, inner membrane subunit YP_001378645.1 PFAM: inner-membrane translocator; KEGG: ade:Adeh_2425 ABC branched-chain amino acid transporter, inner membrane subunit YP_001378646.1 PFAM: Extracellular ligand-binding receptor; KEGG: ade:Adeh_2424 ABC branched chain amino acid transporter, periplasmic ligand binding protein YP_001378647.1 KEGG: ade:Adeh_2423 hypothetical protein YP_001378648.1 PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; KEGG: ade:Adeh_2422 DNA mismatch repair protein MutS-like YP_001378649.1 PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_2421 tetratricopeptide repeat protein YP_001378650.1 KEGG: ade:Adeh_2420 hypothetical protein YP_001378651.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_2418 phosphatidyl-myo-inositol alpha-mannosyltransferase YP_001378652.1 KEGG: ade:Adeh_2416 hypothetical protein YP_001378653.1 PFAM: uncharacterised conserved protein UCP016719; KEGG: ade:Adeh_2411 uncharacterised conserved protein UCP016719 YP_001378654.1 KEGG: ade:Adeh_2410 hypothetical protein YP_001378655.1 TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: ade:Adeh_2409 nicotinate-nucleotide adenylyltransferase YP_001378656.1 KEGG: rxy:Rxyl_2058 hypothetical protein YP_001378657.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_2407 AAA ATPase YP_001378658.1 PFAM: Patatin; KEGG: ade:Adeh_2396 patatin YP_001378659.1 PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: rso:RSc2672 hypothetical protein YP_001378661.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0453 methyltransferase type 12 YP_001378662.1 PFAM: TPR repeat-containing protein; protein of unknown function DUF1025; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_2395 tetratricopeptide repeat protein YP_001378663.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth YP_001378664.1 PFAM: protein of unknown function DUF305; KEGG: tbd:Tbd_1313 hypothetical protein YP_001378665.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ade:Adeh_2393 diguanylate cyclase (GGDEF domain) YP_001378666.1 KEGG: ade:Adeh_2392 CheW-like protein YP_001378667.1 PFAM: response regulator receiver; KEGG: ade:Adeh_2391 response regulator receiver domain protein (CheY-like) YP_001378668.1 TIGRFAM: valyl-tRNA synthetase; KEGG: ade:Adeh_2390 valyl-tRNA synthetase YP_001378669.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: ade:Adeh_2389 nicotinate-nucleotide pyrophosphorylase YP_001378670.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; KEGG: ade:Adeh_2388 biotin--acetyl-CoA-carboxylase ligase YP_001378671.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_001378672.1 KEGG: ade:Adeh_2386 tetratricopeptide repeat protein YP_001378673.1 KEGG: ade:Adeh_2385 hypothetical protein YP_001378674.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: ade:Adeh_2384 integral membrane protein MviN YP_001378675.1 KEGG: ade:Adeh_2383 hypothetical protein YP_001378676.1 KEGG: ade:Adeh_2382 hypothetical protein YP_001378677.1 KEGG: ade:Adeh_2381 hypothetical protein YP_001378678.1 PFAM: response regulator receiver; KEGG: ade:Adeh_2380 response regulator receiver domain protein (CheY-like) YP_001378679.1 KEGG: ade:Adeh_2379 putative transmembrane transcriptional regulator (anti-sigma factor) YP_001378680.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ade:Adeh_2378 sigma-24 (FecI-like) YP_001378681.1 PFAM: Radical SAM domain protein; KEGG: ade:Adeh_2377 radical SAM YP_001378682.1 PFAM: putative RNA methylase; SMART: PUA domain containing protein; KEGG: ade:Adeh_2376 SAM-dependent methyltransferase YP_001378683.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2943 histidine kinase YP_001378684.1 KEGG: ade:Adeh_2374 hypothetical protein YP_001378685.1 PFAM: Abortive infection protein; KEGG: ade:Adeh_2373 abortive infection protein YP_001378686.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: ade:Adeh_2372 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001378687.1 PFAM: response regulator receiver; KEGG: mxa:MXAN_7178 response regulator YP_001378688.1 KEGG: ade:Adeh_2804 hypothetical protein YP_001378689.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2805 multi-sensor signal transduction histidine kinase YP_001378690.1 KEGG: ade:Adeh_2371 hypothetical protein YP_001378691.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: ade:Adeh_2370 phage SPO1 DNA polymerase-related protein YP_001378692.1 PFAM: protein of unknown function DUF107; KEGG: ade:Adeh_2369 protein of unknown function DUF107 YP_001378693.1 PFAM: band 7 protein; KEGG: ade:Adeh_2368 membrane protease YP_001378694.1 PFAM: peptidase T2 asparaginase 2; KEGG: ade:Adeh_2366 peptidase T2, asparaginase 2 YP_001378695.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ade:Adeh_2365 acetyl-CoA C-acetyltransferase YP_001378696.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: ade:Adeh_2364 3-oxoacid CoA-transferase, subunit A YP_001378697.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: ade:Adeh_2363 3-oxoacid CoA-transferase, subunit B YP_001378698.1 PFAM: protein of unknown function DUF62; KEGG: ade:Adeh_2362 protein of unknown function DUF62 YP_001378699.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_2361 conserved region 2266 YP_001378700.1 PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: ade:Adeh_2360 (uracil-5)-methyltransferase YP_001378701.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_2359 long-chain-fatty-acid--CoA ligase YP_001378702.1 PFAM: peptidase M48 Ste24p; KEGG: ade:Adeh_2357 STE24 endopeptidase YP_001378704.1 PFAM: VWA containing CoxE family protein; KEGG: ade:Adeh_2356 VWA containing CoxE-like YP_001378705.1 KEGG: gga:769666 hypothetical protein LOC769666 YP_001378706.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001378707.1 KEGG: ath:AT1G31290 unknown protein YP_001378708.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_001378709.1 PFAM: VanZ family protein; KEGG: ade:Adeh_2354 hypothetical protein YP_001378710.1 KEGG: ade:Adeh_2353 transferase hexapeptide repeat YP_001378711.1 PFAM: cyclic nucleotide-binding; KEGG: ade:Adeh_2352 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001378712.1 KEGG: ade:Adeh_2351 DedA YP_001378713.1 PFAM: type IV pilus assembly PilZ; Heat shock protein 70; KEGG: ade:Adeh_2350 conserved region 2266 YP_001378714.1 TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; KEGG: ade:Adeh_2349 inosine-5'-monophosphate dehydrogenase YP_001378715.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_001378716.1 KEGG: ade:Adeh_2347 hypothetical protein YP_001378717.1 KEGG: mxa:MXAN_3992 putative lipoprotein YP_001378718.1 KEGG: ade:Adeh_2346 tetratricopeptide repeat protein YP_001378719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_2345 AMP-dependent synthetase and ligase YP_001378720.1 PFAM: response regulator receiver; KEGG: ade:Adeh_2344 response regulator receiver domain protein (CheY-like) YP_001378721.1 PFAM: Sterol-binding domain protein; KEGG: ade:Adeh_2343 putative sterol carrier protein YP_001378722.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ade:Adeh_2342 alpha-methylacyl-CoA racemase YP_001378723.1 KEGG: ade:Adeh_2341 hypothetical protein YP_001378724.1 KEGG: ade:Adeh_2340 hypothetical protein YP_001378725.1 PFAM: periplasmic solute binding protein; KEGG: ade:Adeh_2339 ABC metal ion transporter, periplasmic solute binding protein YP_001378726.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2338 ABC transporter, ATPase subunit YP_001378727.1 PFAM: ABC-3 protein; KEGG: ade:Adeh_2337 ABCMn2+/Zn2+ transporter, inner membrane subunit YP_001378728.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: mxa:MXAN_1014 sensory box histidine kinase SdeK YP_001378729.1 KEGG: ter:Tery_0202 putative transcriptional regulator YP_001378730.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lpp:lpp0673 hypothetical protein YP_001378731.1 PFAM: Recombinase; KEGG: ade:Adeh_2336 recombinase YP_001378732.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: hha:Hhal_1672 plasmid maintenance system antidote protein, XRE family YP_001378733.1 PFAM: glutathione-dependent formaldehyde-activating GFA; plasmid pRiA4b ORF-3 family protein; KEGG: stp:Strop_1556 plasmid pRiA4b ORF-3 family protein YP_001378734.1 PFAM: protein of unknown function DUF378; KEGG: mxa:MXAN_6793 hypothetical protein YP_001378735.1 KEGG: aav:Aave_3967 hypothetical protein YP_001378736.1 KEGG: ade:Adeh_3189 hypothetical protein YP_001378738.1 PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: sus:Acid_1368 serine/threonine protein kinase with TPR repeats YP_001378739.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mes:Meso_2193 glutathione-dependent formaldehyde-activating, GFA YP_001378741.1 KEGG: gka:GK0171 hypothetical protein YP_001378742.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mxa:MXAN_5245 hypothetical protein YP_001378743.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rha:RHA1_ro03831 sigma factor, sigma 70 type, group 4 YP_001378744.1 KEGG: rha:RHA1_ro03830 hypothetical protein YP_001378745.1 KEGG: mpt:Mpe_A2830 hypothetical protein YP_001378746.1 PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: mpt:Mpe_A2831 hypothetical protein YP_001378749.1 PFAM: Rhodanese domain protein; KEGG: ttj:TTHA0839 phage shock protein E (rhodanese-like domain protein) YP_001378750.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A0188 putative acetyltransferase YP_001378751.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_2253 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001378752.1 PFAM: aldo/keto reductase; KEGG: aba:Acid345_2253 aldo/keto reductase YP_001378753.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ade:Adeh_1747 sigma-24 (FecI-like) YP_001378754.1 KEGG: ade:Adeh_1746 hypothetical protein YP_001378756.1 KEGG: ade:Adeh_2261 molecular chaperone-like YP_001378758.1 PFAM: OmpA/MotB domain protein; KEGG: mxa:MXAN_4254 OmpA domain protein YP_001378760.1 TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_0998 molybdate ABC transporter, ATPase subunit YP_001378761.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_0999 molybdate ABC transporter, inner membrane subunit YP_001378762.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ade:Adeh_1000 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001378763.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: ade:Adeh_1001 DNA-binding excisionase/Xis YP_001378764.1 KEGG: art:Arth_1437 hypothetical protein YP_001378765.1 KEGG: mxa:MXAN_2344 hypothetical protein YP_001378766.1 KEGG: gme:Gmet_1100 hypothetical protein YP_001378767.1 PFAM: Rhomboid family protein; KEGG: mca:MCA2616 rhomboid family protein YP_001378768.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_2939 alpha/beta hydrolase YP_001378769.1 KEGG: sat:SYN_01072 hypothetical cytosolic protein YP_001378770.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: dde:Dde_3416 thioredoxin YP_001378771.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_0865 oxidoreductase, short chain dehydrogenase/reductase family YP_001378772.1 TIGRFAM: DNA polymerase LigD polymerase domain; PFAM: DNA primase small subunit; KEGG: ade:Adeh_0962 hypothetical protein YP_001378773.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth YP_001378774.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_0941 pyridine nucleotide-disulphide oxidoreductase YP_001378775.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: ade:Adeh_2221 isocitrate lyase YP_001378776.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; KEGG: ade:Adeh_2227 isocitrate dehydrogenase, NADP-dependent YP_001378777.1 Catalyzes the reversible oxidation of malate to oxaloacetate YP_001378779.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: ade:Adeh_2897 acetate kinase YP_001378780.1 PFAM: alpha/beta hydrolase fold; KEGG: nca:Noca_4916 alpha/beta hydrolase fold YP_001378781.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0017 response regulator receiver domain protein (CheY-like) YP_001378782.1 PFAM: CBS domain containing protein; KEGG: ade:Adeh_2198 putative signal-transduction protein with CBS domains YP_001378783.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_2197 transcriptional regulator, LysR family YP_001378784.1 PFAM: carbon starvation protein CstA; KEGG: hwa:HQ1036A carbon starvation protein A YP_001378785.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_3183 signal transduction histidine kinase YP_001378787.1 PFAM: major facilitator superfamily MFS_1; KEGG: aeh:Mlg_0203 major facilitator superfamily MFS_1 YP_001378788.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ade:Adeh_2267 transcriptional regulator, AraC family YP_001378789.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rfr:Rfer_2229 methyltransferase type 11 YP_001378790.1 PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: gme:Gmet_2154 twin-arginine translocation pathway signal YP_001378791.1 PFAM: response regulator receiver; KEGG: acb:A1S_2811 chemotactic signal transduction system component YP_001378792.1 KEGG: gme:Gmet_0772 FxsA cytoplasmic membrane protein YP_001378793.1 KEGG: mxa:MXAN_5566 FxsA-like protein YP_001378794.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: ret:RHE_CH02354 probable FAD-dependent oxidoreductase protein YP_001378795.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_2167 hemerythrin HHE cation binding protein YP_001378796.1 KEGG: noc:Noc_1628 hypothetical protein YP_001378797.1 PFAM: putative RNA methylase; Methyltransferase type 11; KEGG: mxa:MXAN_1559 hypothetical protein YP_001378799.1 KEGG: saz:Sama_2263 S23 ribosomal YP_001378800.1 PFAM: protein of unknown function DUF28; KEGG: ade:Adeh_2184 protein of unknown function DUF28 YP_001378801.1 PFAM: Spermine synthase; KEGG: rfr:Rfer_0785 putative spermidine synthase YP_001378802.1 PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: rpc:RPC_0610 putative signal-transduction protein with CBS domains YP_001378803.1 PFAM: protein of unknown function DUF191; KEGG: ade:Adeh_2176 protein of unknown function DUF191 YP_001378804.1 PFAM: dienelactone hydrolase; BAAT/Acyl-CoA thioester hydrolase; KEGG: gme:Gmet_0790 dienelactone hydrolase YP_001378805.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_0721 heme ABC transporter, ATP-binding protein YP_001378806.1 PFAM: ABC-2 type transporter; KEGG: ade:Adeh_3168 ABC transporter, inner membrane subunit YP_001378807.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ade:Adeh_1320 zinc-binding alcohol dehydrogenase YP_001378808.1 KEGG: mgi:Mflv_3149 hypothetical protein YP_001378809.1 KEGG: ade:Adeh_2472 hypothetical protein YP_001378810.1 KEGG: ade:Adeh_2175 hypothetical protein YP_001378811.1 KEGG: ade:Adeh_1246 hypothetical protein YP_001378812.1 KEGG: sus:Acid_4692 hypothetical protein YP_001378813.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: ade:Adeh_2153 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001378814.1 KEGG: ade:Adeh_2199 oxidoreductase YP_001378815.1 KEGG: bba:Bd2594 hypothetical protein YP_001378816.1 KEGG: ade:Adeh_3186 hypothetical protein YP_001378817.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: ppd:Ppro_2808 para-aminobenzoate synthase, subunit I YP_001378818.1 PFAM: protein of unknown function DUF309; KEGG: lbl:LBL_1725 hypothetical protein YP_001378819.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2157 ABC transporter, duplicated ATPase subunits YP_001378820.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_4042 HNH endonuclease YP_001378821.1 KEGG: ade:Adeh_2156 hypothetical protein YP_001378822.1 KEGG: ade:Adeh_2155 hypothetical protein YP_001378823.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_3709 major facilitator superfamily MFS_1 transporter YP_001378824.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A2852 putative oxidoreductase protein YP_001378825.1 PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: nfa:nfa32740 hypothetical protein YP_001378826.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rme:Rmet_1369 thiosulphate-binding protein YP_001378827.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: gsu:GSU1349 sulfate ABC transporter, ATP-binding protein YP_001378828.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_A2238 ABC-type transporter, permease component: SulT family YP_001378829.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1345 putative sulfate transport ABC transporter protein YP_001378830.1 PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate kinase; KEGG: sus:Acid_7933 adenylylsulfate reductase, thioredoxin dependent YP_001378831.1 TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: azo:azo0428 putative sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase YP_001378832.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_001378833.1 KEGG: ade:Adeh_0914 bacterio-opsin linked product YP_001378834.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_3316 metallophosphoesterase YP_001378835.1 KEGG: ade:Adeh_0446 hypothetical protein YP_001378836.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_0445 hypothetical protein YP_001378837.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_2904 AMP-dependent synthetase and ligase YP_001378838.1 KEGG: gme:Gmet_0208 hypothetical protein YP_001378839.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ppd:Ppro_0043 lipolytic enzyme, G-D-S-L family YP_001378840.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ade:Adeh_2119 GreA/GreB family elongation factor YP_001378841.1 KEGG: fal:FRAAL3273 putative alkylated DNA repair protein YP_001378842.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSc0107 PhnB protein YP_001378843.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: rba:RB9892 cytochrome oxidase chain I YP_001378844.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: rba:RB9894 cytochrome d oxidase subunit YP_001378845.1 KEGG: rba:RB10686 hypothetical protein YP_001378847.1 KEGG: ade:Adeh_2151 hypothetical protein YP_001378848.1 PFAM: protein of unknown function DUF355; KEGG: ade:Adeh_1458 protein of unknown function DUF355 YP_001378849.1 PFAM: extracellular solute-binding protein family 1; KEGG: ade:Adeh_3119 ABC sugar transporter, periplasmic ligand binding protein YP_001378850.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3120 ABC transporter, ATPase subunit YP_001378851.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_3121 ABC sugar transporter, inner membrane subunit YP_001378852.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_3122 ABC sugar transporter, inner membrane subunit YP_001378853.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: ade:Adeh_2245 methylmalonate-semialdehyde dehydrogenase YP_001378854.1 PFAM: NADPH-dependent FMN reductase; KEGG: bba:Bd1754 putative oxidoreductase YP_001378855.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ade:Adeh_2929 UBA/ThiF-type NAD/FAD binding protein YP_001378856.1 KEGG: ade:Adeh_2930 hypothetical protein YP_001378857.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_3191 protein of unknown function DUF438 YP_001378858.1 KEGG: ade:Adeh_2148 outer membrane lipoprotein, putative YP_001378859.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2956 periplasmic sensor hybrid histidine kinase YP_001378860.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: ade:Adeh_2905 phosphoesterase, PA-phosphatase related YP_001378861.1 KEGG: ade:Adeh_0467 blue (type 1) copper domain YP_001378862.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_001378863.1 PFAM: inner-membrane translocator; KEGG: ade:Adeh_2139 ABC branched-chain amino acid transporter, inner membrane subunit YP_001378864.1 PFAM: inner-membrane translocator; KEGG: ade:Adeh_2138 ABC branched-chain amino acid transporter, inner membrane subunit YP_001378865.1 KEGG: ade:Adeh_2137 ABC branched-chain amino acid transporter, periplasmic ligand biinding protein YP_001378866.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2136 ABC branched-chain amino acid transporter, ATPase subunit YP_001378867.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2135 ABC branched-chain amino acid transporter, ATPase subunit YP_001378868.1 TIGRFAM: cell wall/surface repeat protein; KEGG: mlo:mlr0585 hypothetical glycine-rich protein YP_001378869.1 PFAM: aldo/keto reductase; KEGG: rxy:Rxyl_3181 aldo/keto reductase YP_001378870.1 KEGG: ade:Adeh_1453 hypothetical protein YP_001378871.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_1452 metallophosphoesterase YP_001378872.1 KEGG: ade:Adeh_0510 GreA/GreB family elongation factor YP_001378873.1 PFAM: Hemerythrin HHE cation binding domain protein YP_001378874.1 PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_2133 hemerythrin HHE cation binding protein YP_001378875.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_2132 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001378876.1 KEGG: ade:Adeh_2116 hypothetical protein YP_001378877.1 KEGG: ade:Adeh_2117 hypothetical protein YP_001378878.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_3941 outer membrane efflux protein YP_001378879.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ade:Adeh_3942 cell wall surface anchor family protein YP_001378880.1 PFAM: acriflavin resistance protein; KEGG: ade:Adeh_3943 acriflavin resistance protein YP_001378881.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: rba:RB7019 hypothetical protein YP_001378882.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mxa:MXAN_7225 putative sugar ABC transporter, ATP-binding protein YP_001378883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7293 putative sugar ABC transporter, permease protein YP_001378884.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7294 putative sugar ABC transporter, permease protein YP_001378885.1 PFAM: extracellular solute-binding protein family 1; KEGG: mxa:MXAN_7295 putative sugar ABC transporter, periplasmic sugar-binding protein YP_001378886.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity YP_001378887.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ade:Adeh_1455 pyridoxamine 5'-phosphate oxidase YP_001378888.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_0859 HNH nuclease YP_001378889.1 PFAM: protein of unknown function DUF454; KEGG: ade:Adeh_0524 protein of unknown function DUF454 YP_001378890.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: mxa:MXAN_6052 TPR domain protein YP_001378891.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_001378892.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: ade:Adeh_2112 peptide chain release factor 3 YP_001378893.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_2958 major facilitator superfamily MFS_1 transporter YP_001378894.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mxa:MXAN_7254 hypothetical protein YP_001378895.1 PFAM: LemA family protein; KEGG: ade:Adeh_3304 LemA YP_001378896.1 PFAM: peptidase M48 Ste24p; KEGG: ade:Adeh_3305 peptidase M48, Ste24p YP_001378897.1 KEGG: ade:Adeh_2951 type I topoisomerase YP_001378898.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive YP_001378899.1 KEGG: ade:Adeh_2105 hypothetical protein YP_001378900.1 KEGG: ade:Adeh_2104 hypothetical protein YP_001378901.1 PFAM: cytochrome c assembly protein; KEGG: ade:Adeh_2103 cytochrome c assembly protein YP_001378902.1 PFAM: transport-associated; KEGG: dge:Dgeo_0141 transport-associated YP_001378903.1 PFAM: transport-associated; KEGG: mxa:MXAN_4342 phospholipid-binding protein YP_001378904.1 KEGG: mxa:MXAN_2722 putative lipoprotein YP_001378906.1 KEGG: ade:Adeh_3456 hypothetical protein YP_001378907.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_001378908.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_7057 major facilitator family transporter YP_001378909.1 KEGG: ade:Adeh_3485 hypothetical protein YP_001378910.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE domain protein; KEGG: ade:Adeh_2090 GAF sensor signal transduction histidine kinase YP_001378911.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ade:Adeh_0192 BFD-like (2Fe-2S)-binding region YP_001378912.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_2092 DEAD/DEAH box helicase-like YP_001378913.1 PFAM: Formamidopyrimidine-DNA glycolase; KEGG: ade:Adeh_2091 formamidopyrimidine-DNA glycolase YP_001378914.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bam:Bamb_3324 cupin 2, conserved barrel domain protein YP_001378915.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mxa:MXAN_1554 iron-sulfur cluster-binding protein, Rieske family YP_001378917.1 KEGG: ade:Adeh_0311 hypothetical protein YP_001378918.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ade:Adeh_2106 cation diffusion facilitator family transporter YP_001378919.1 PFAM: phosphofructokinase; KEGG: ade:Adeh_2085 diphosphate--fructose-6-phosphate 1-phosphotransferase YP_001378920.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mxa:MXAN_6954 glutathione-regulated potassium-efflux system YP_001378921.1 PFAM: protein of unknown function DUF88; KEGG: ade:Adeh_2817 protein of unknown function DUF88 YP_001378922.1 PFAM: TPR repeat-containing protein; transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ret:RHE_CH01221 putative regulator protein YP_001378923.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: reh:H16_B2179 hypothetical protein YP_001378924.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ade:Adeh_2084 Cys/Met metabolism pyridoxal-phosphate-dependent enzymes YP_001378925.1 PFAM: Ig domain protein group 2 domain protein; KEGG: ade:Adeh_2713 Ig-like, group 2 YP_001378926.1 PFAM: DTW domain containing protein; KEGG: ade:Adeh_2058 DTW YP_001378927.1 KEGG: ade:Adeh_2522 hypothetical protein YP_001378928.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ade:Adeh_3049 hypothetical protein YP_001378929.1 KEGG: rpe:RPE_0250 transposase, IS4 family protein YP_001378930.1 PFAM: ribonuclease H; KEGG: ade:Adeh_2077 ribonuclease H YP_001378931.1 TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ade:Adeh_2079 peptidase M20C, Xaa-His dipeptidase YP_001378932.1 KEGG: ade:Adeh_2083 hypothetical protein YP_001378933.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ade:Adeh_2082 peptidoglycan-binding protein YP_001378934.1 KEGG: ade:Adeh_2072 hypothetical protein YP_001378936.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ade:Adeh_2074 peptidylprolyl isomerase, FKBP-type YP_001378937.1 PFAM: Rubrerythrin; KEGG: ade:Adeh_2075 rubrerythrin YP_001378938.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_1716 phospholipid/glycerol acyltransferase YP_001378939.1 KEGG: eba:ebA849 hypothetical protein YP_001378940.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: ade:Adeh_2071 2-isopropylmalate synthase/homocitrate synthase YP_001378941.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_001378942.1 PFAM: peptidase M48 Ste24p; KEGG: ade:Adeh_0985 peptidase M48, Ste24p YP_001378943.1 PFAM: aldo/keto reductase; KEGG: ade:Adeh_3096 aldo/keto reductase YP_001378944.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: ade:Adeh_2059 translation elongation factor G YP_001378945.1 KEGG: ade:Adeh_2562 hypothetical protein YP_001378946.1 PFAM: Na+ symporter; KEGG: mta:Moth_2279 SSS sodium solute transporter superfamily YP_001378947.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan YP_001378948.1 KEGG: bte:BTH_II2268 bacterial type II and III secretion system protein domain protein YP_001378950.1 PFAM: protein of unknown function DUF218; KEGG: mxa:MXAN_5362 hypothetical protein YP_001378951.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: ade:Adeh_3016 hemerythrin-like, metal-binding protein YP_001378952.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: ade:Adeh_2049 phosphomethylpyrimidine kinase YP_001378953.1 PFAM: glycoside hydrolase family 57; KEGG: ade:Adeh_2048 glycoside hydrolase, family 57 YP_001378954.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_2047 AMP-dependent synthetase and ligase YP_001378956.1 KEGG: ath:AT1G72080 unknown protein YP_001378957.1 KEGG: ade:Adeh_1783 hypothetical membrane protein YP_001378958.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MASE1 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: mxa:MXAN_2386 putative sensory box histidine kinase/response regulator YP_001378959.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2043 ABC transporter, ATPase subunit YP_001378960.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_2042 protein of unknown function DUF214 YP_001378961.1 KEGG: ade:Adeh_2041 hypothetical protein YP_001378962.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol YP_001378963.1 SMART: serine/threonine protein kinase; KEGG: ade:Adeh_2033 serine/threonine protein kinase-like YP_001378964.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_2032 tetratricopeptide repeat protein YP_001378965.1 PFAM: glycosyl transferase family 2; glycoside hydrolase family 8; type IV pilus assembly PilZ; KEGG: ade:Adeh_2031 glycosyl transferase, family 2 YP_001378966.1 KEGG: ade:Adeh_2030 hypothetical protein YP_001378967.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_001378968.1 KEGG: mxa:MXAN_5969 hypothetical protein YP_001378969.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ade:Adeh_2027 NAD-dependent epimerase/dehydratase YP_001378970.1 KEGG: ade:Adeh_2026 hypothetical protein YP_001378971.1 KEGG: ade:Adeh_2025 hypothetical protein YP_001378972.1 PFAM: peptidase M2 peptidyl-dipeptidase A; KEGG: ade:Adeh_2024 peptidyl-dipeptidase A YP_001378973.1 PFAM: CsbD family protein; KEGG: ade:Adeh_2023 CsbD-like protein YP_001378974.1 PFAM: acriflavin resistance protein; KEGG: ade:Adeh_2022 acriflavin resistance protein YP_001378975.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ade:Adeh_2021 secretion protein HlyD YP_001378976.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_2020 outer membrane efflux protein YP_001378977.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 2; KEGG: ade:Adeh_2019 glutaredoxin, GrxC YP_001378978.1 PFAM: peptidase M48 Ste24p; KEGG: ade:Adeh_2018 peptidase M48, Ste24p YP_001378979.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_2017 transcriptional regulator, LysR family YP_001378980.1 PFAM: Integral membrane protein TerC; KEGG: ade:Adeh_2016 integral membrane protein TerC YP_001378981.1 KEGG: ade:Adeh_2013 hypothetical protein YP_001378982.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001378983.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2011 periplasmic sensor signal transduction histidine kinase YP_001378984.1 PFAM: peptidase zinc-dependent; KEGG: ade:Adeh_2010 peptidase predicted, zinc-dependent YP_001378985.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_2009 two component, sigma54 specific, transcriptional regulator, fis family YP_001378986.1 KEGG: mxa:MXAN_6687 hypothetical protein YP_001378987.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_2007 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001378988.1 PFAM: Polysulphide reductase NrfD; KEGG: ade:Adeh_2006 polysulphide reductase, NrfD YP_001378989.1 PFAM: glycine cleavage H-protein; KEGG: ade:Adeh_2005 glycine cleavage H-protein YP_001378990.1 KEGG: ade:Adeh_2004 hypothetical protein YP_001378991.1 PFAM: glycine cleavage H-protein; KEGG: ade:Adeh_2003 glycine cleavage H-protein YP_001378992.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_2002 cytochrome c family protein YP_001378993.1 KEGG: ade:Adeh_2001 deca-heme C-type cytochrome-like YP_001378994.1 PFAM: peptidase M48 Ste24p; peptidase M56 BlaR1; KEGG: ade:Adeh_2000 peptidase M56, BlaR1 YP_001378995.1 KEGG: ade:Adeh_1999 hypothetical protein YP_001378996.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: ade:Adeh_1998 periplasmic sensor signal transduction histidine kinase YP_001378997.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ade:Adeh_1997 two component transcriptional regulator, LuxR family YP_001378998.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: ava:Ava_2018 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001378999.1 KEGG: ana:all5120 unknown protein YP_001379000.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_3057 glycosyl transferase, group 1 YP_001379001.1 PFAM: polysaccharide biosynthesis protein; KEGG: bfs:BF2598 putative LPS biosynthesis related polysaccharide transporter/flippase YP_001379002.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rle:RL0814 hypothetical protein YP_001379003.1 KEGG: syn:sll1755 hypothetical protein YP_001379004.1 KEGG: gvi:gll3332 unknown protein YP_001379005.1 PFAM: glycosyl transferase family 2; KEGG: mac:MA2462 glucosaminyltransferase YP_001379006.1 KEGG: tcr:511217.10 hypothetical protein Pfam: Fascin YP_001379007.1 KEGG: ade:Adeh_3052 hypothetical protein YP_001379008.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_3051 glycosyl transferase, family 2 YP_001379009.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_3050 glycosyl transferase, family 2 YP_001379010.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_3077 multihaem cytochrome YP_001379011.1 KEGG: mxa:MXAN_0859 putative lipoprotein YP_001379012.1 PFAM: Spermine synthase; KEGG: ade:Adeh_3062 spermine synthase YP_001379013.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_3077 multihaem cytochrome YP_001379014.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_3077 multihaem cytochrome YP_001379015.1 KEGG: cte:CT2205 hypothetical protein YP_001379016.1 KEGG: ade:Adeh_0029 fibronectin, type III YP_001379017.1 KEGG: gsu:GSU2504 cytochrome c family protein YP_001379018.1 KEGG: ade:Adeh_3073 hypothetical protein YP_001379019.1 KEGG: ade:Adeh_3072 hypothetical protein YP_001379020.1 KEGG: ade:Adeh_3071 lipoprotein, putative YP_001379021.1 KEGG: ade:Adeh_3070 lipoprotein, putative YP_001379022.1 KEGG: ade:Adeh_3069 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001379023.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_3068 cytochrome c family protein YP_001379024.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_3067 cytochrome c family protein YP_001379025.1 PFAM: NHL repeat containing protein; KEGG: ade:Adeh_3066 NHL repeat protein YP_001379026.1 KEGG: ade:Adeh_3065 NHL repeat domain protein YP_001379027.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3075 tetratricopeptide repeat protein YP_001379028.1 KEGG: ade:Adeh_1996 hypothetical protein YP_001379029.1 KEGG: ade:Adeh_1995 hypothetical protein YP_001379030.1 KEGG: plt:Plut_0173 hypothetical protein YP_001379031.1 KEGG: mlo:mlr6048 transposase YP_001379032.1 PFAM: glutamyl-tRNA reductase; Shikimate/quinate 5-dehydrogenase; KEGG: ade:Adeh_1994 glutamyl-tRNA reductase YP_001379033.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1993 signal transduction histidine kinase, nitrogen specific, NtrB YP_001379034.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: ade:Adeh_1992 two component, sigma54 specific, transcriptional regulator, fis family YP_001379035.1 TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: ade:Adeh_1991 RNA polymerase sigma factor RpoH YP_001379036.1 PFAM: histidine kinase A domain protein; KEGG: nca:Noca_1262 PAS sensor protein YP_001379037.1 PFAM: response regulator receiver; KEGG: ade:Adeh_1989 response regulator receiver domain protein (CheY-like) YP_001379038.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001379039.1 KEGG: mxa:MXAN_2599 hypothetical protein YP_001379040.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: ade:Adeh_1987 small GTP-binding TypA YP_001379041.1 PFAM: GGDEF domain containing protein; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_4445 sensory box histidine kinase/response regulator YP_001379042.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_4444 sensor histidine kinase YP_001379043.1 KEGG: mxa:MXAN_4443 hypothetical protein YP_001379044.1 PFAM: Fibronectin type III domain protein; KEGG: ade:Adeh_0029 fibronectin, type III YP_001379046.1 KEGG: mxa:MXAN_4442 hypothetical protein YP_001379047.1 KEGG: mxa:MXAN_4441 hypothetical protein YP_001379048.1 KEGG: mxa:MXAN_4440 hypothetical protein YP_001379049.1 KEGG: sco:SCO4250 hypothetical protein YP_001379050.1 PFAM: response regulator receiver; KEGG: ade:Adeh_1986 response regulator receiver domain protein (CheY-like) YP_001379051.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: bxe:Bxe_A1996 magnesium and cobalt transporter, CorA family YP_001379052.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ade:Adeh_1985 glyoxalase/bleomycin resistance protein/dioxygenase YP_001379053.1 PFAM: beta-lactamase domain protein; KEGG: ade:Adeh_1984 hydroxyacylglutathione hydrolase YP_001379054.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ade:Adeh_1983 CDP-alcohol phosphatidyltransferase YP_001379055.1 KEGG: bba:Bd0740 hypothetical protein YP_001379056.1 PFAM: PKD domain containing protein YP_001379057.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1782 PAS/PAC sensor signal transduction histidine kinase YP_001379058.1 KEGG: mca:MCA0424 cytochrome c family protein YP_001379059.1 KEGG: gsu:GSU3228 cytochrome c family protein YP_001379060.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_001379061.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: ade:Adeh_1981 2-isopropylmalate synthase YP_001379062.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_001379063.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_001379064.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ade:Adeh_1978 acetolactate synthase, large subunit, biosynthetic type YP_001379065.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: ade:Adeh_1977 acetolactate synthase, small subunit YP_001379066.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_001379067.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_001379068.1 PFAM: ribosomal protein L35; KEGG: ade:Adeh_1974 ribosomal protein L35 YP_001379069.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_001379070.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_001379071.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_001379072.1 KEGG: ade:Adeh_1970 hypothetical protein YP_001379073.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: ade:Adeh_1969 integration host factor, alpha subunit YP_001379074.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: ade:Adeh_1966 6-pyruvoyl tetrahydropterin synthase YP_001379075.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer YP_001379076.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_1964 short-chain dehydrogenase/reductase SDR YP_001379077.1 PFAM: FAD linked oxidase domain protein; KEGG: ade:Adeh_1963 FAD linked oxidase-like YP_001379078.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: ade:Adeh_1962 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_001379079.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_001379080.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_1960 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001379081.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: ade:Adeh_1959 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_001379082.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_001379083.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: ade:Adeh_1957 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001379084.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_1956 tetratricopeptide repeat protein YP_001379085.1 KEGG: mxa:MXAN_3504 putative lipoprotein YP_001379086.1 KEGG: mxa:MXAN_3505 hypothetical protein YP_001379087.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ade:Adeh_1955 NAD-dependent epimerase/dehydratase YP_001379088.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ade:Adeh_1954 NAD-dependent epimerase/dehydratase YP_001379090.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: ade:Adeh_1953 glycosyl transferase, family 51 YP_001379091.1 PFAM: manganese and iron superoxide dismutase; KEGG: ade:Adeh_1952 manganese and iron superoxide dismutase YP_001379092.1 PFAM: protein of unknown function DUF1206; KEGG: rxy:Rxyl_0683 protein of unknown function DUF1206 YP_001379093.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; KEGG: ade:Adeh_1951 A/G-specific adenine glycosylase YP_001379094.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001379095.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001379096.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001379097.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001379098.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_001379099.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_001379100.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_001379101.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001379102.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_001379103.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_001379104.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; KEGG: ade:Adeh_1940 ribosomal protein S3 YP_001379105.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001379106.1 one of the stabilizing components for the large ribosomal subunit YP_001379107.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_001379108.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_001379109.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_001379110.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_001379111.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_001379112.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_001379113.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_001379114.1 binds 5S rRNA along with protein L5 and L25 YP_001379115.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_001379116.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_001379117.1 late assembly protein YP_001379118.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_001379119.1 PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: ade:Adeh_1925 adenylate kinase YP_001379120.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: ade:Adeh_1924 methionine aminopeptidase, type I YP_001379121.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_001379122.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_001379123.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_001379124.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_001379125.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_001379126.1 is a component of the macrolide binding site in the peptidyl transferase center YP_001379127.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: ade:Adeh_1917 hypothetical protein YP_001379128.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_001379129.1 KEGG: ade:Adeh_1915 hypothetical protein YP_001379130.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: ade:Adeh_1914 16S rRNA processing protein RimM YP_001379131.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_001379132.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_001379133.1 KEGG: ade:Adeh_1911 hypothetical protein YP_001379134.1 PFAM: protein of unknown function UPF0102; KEGG: ade:Adeh_1910 protein of unknown function UPF0102 YP_001379135.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ade:Adeh_1909 protein of unknown function UPF0011 YP_001379136.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_0044 GCN5-related N-acetyltransferase YP_001379137.1 KEGG: mxa:MXAN_3553 hypothetical protein YP_001379138.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_1908 two component, sigma54 specific, transcriptional regulator, fis family YP_001379139.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1907 signal transduction histidine kinase, nitrogen specific, NtrB YP_001379140.1 PFAM: Lytic transglycosylase catalytic; KEGG: ade:Adeh_1906 lytic transglycosylase YP_001379141.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_1905 HNH endonuclease YP_001379142.1 KEGG: ade:Adeh_1904 ATP-binding protein YP_001379143.1 PFAM: heat shock protein DnaJ domain protein; KEGG: ade:Adeh_1903 heat shock protein DnaJ-like YP_001379144.1 KEGG: ade:Adeh_1902 hypothetical protein YP_001379145.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: ade:Adeh_1901 pseudouridine synthase, RluD YP_001379146.1 KEGG: ade:Adeh_1900 hypothetical protein YP_001379147.1 KEGG: ade:Adeh_1899 hypothetical protein YP_001379149.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_1898 methyltransferase type 11 YP_001379150.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_1897 ABC transporter, ATPase subunit YP_001379151.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis YP_001379152.1 KEGG: sma:SAV5835 hypothetical protein YP_001379153.1 PFAM: protein of unknown function DUF1458; KEGG: ade:Adeh_1894 protein of unknown function DUF1458 YP_001379154.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2439 methyltransferase type 11 YP_001379155.1 KEGG: ade:Adeh_0201 hypothetical protein YP_001379156.1 TIGRFAM: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase; PFAM: HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase; KEGG: ade:Adeh_1870 HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase YP_001379157.1 KEGG: ade:Adeh_1869 hypothetical protein YP_001379158.1 PFAM: helix-turn-helix domain protein; KEGG: ade:Adeh_1868 transcriptional regulator, XRE family YP_001379159.1 PFAM: peptidase M16 domain protein; KEGG: ade:Adeh_1867 peptidase M16-like YP_001379160.1 PFAM: peptidase M16 domain protein; KEGG: ade:Adeh_1866 peptidase M16-like YP_001379161.1 PFAM: pseudouridine synthase; KEGG: ade:Adeh_1865 pseudouridine synthase YP_001379162.1 KEGG: ade:Adeh_1864 hypothetical protein YP_001379163.1 PFAM: protein of unknown function DUF140; KEGG: ade:Adeh_1863 ABC amino acid transporter, inner membrane subunit YP_001379164.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_1862 ABC transporter, ATPase subunit YP_001379165.1 PFAM: Mammalian cell entry related domain protein; KEGG: ade:Adeh_1861 hypothetical protein YP_001379167.1 TIGRFAM: TonB family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_0856 TonB family protein YP_001379168.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ade:Adeh_1860 cytochrome c biogenesis protein, thiol-disulfide interchange protein YP_001379169.1 PFAM: protein of unknown function DUF329; KEGG: ade:Adeh_1859 protein of unknown function DUF329 YP_001379170.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ade:Adeh_1858 D-isomer specific 2-hydroxyacid dehydrogenase YP_001379171.1 KEGG: ade:Adeh_1857 hypothetical protein YP_001379173.1 TIGRFAM: Extracellular HAF; KEGG: mac:MA0957 hypothetical protein YP_001379174.1 KEGG: ade:Adeh_0244 LigA YP_001379175.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; KEGG: ade:Adeh_1834 methylmalonyl-CoA mutase YP_001379176.1 PFAM: cobalamin B12-binding domain protein; KEGG: ade:Adeh_1832 methylmalonyl-CoA mutase YP_001379177.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_1830 molybdenum cofactor biosynthesis enzyme YP_001379178.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: ade:Adeh_1829 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase YP_001379179.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001379180.1 PFAM: dehydrogenase E1 component; KEGG: ade:Adeh_1827 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) YP_001379181.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: ade:Adeh_1826 transketolase YP_001379182.1 catalytic domain of components of various dehydrogenase complexes; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ade:Adeh_1825 pyruvate dehydrogenase-like complex E2 component YP_001379183.1 PFAM: TatD-related deoxyribonuclease; KEGG: ade:Adeh_1824 TatD-related deoxyribonuclease YP_001379184.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ade:Adeh_1823 UBA/ThiF-type NAD/FAD binding fold YP_001379185.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: ade:Adeh_1822 dihydrolipoamide dehydrogenase YP_001379186.1 TIGRFAM: lipoate-protein ligase B; PFAM: NUDIX hydrolase; biotin/lipoate A/B protein ligase; KEGG: ade:Adeh_1821 lipoate-protein ligase B YP_001379188.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP YP_001379189.1 KEGG: mxa:MXAN_4951 ICE-like protease (caspase) p20 domain protein YP_001379191.1 KEGG: azo:azo3036 conserved hypothetical protein YP_001379192.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_3183 signal transduction histidine kinase YP_001379193.1 PFAM: aminotransferase class I and II; KEGG: ddi:DDB_0232139 alanine transaminase YP_001379194.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: ade:Adeh_3753 molybdopterin oxidoreductase Fe4s4 protein YP_001379195.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ade:Adeh_3754 formate dehydrogenase, alpha subunit, anaerobic YP_001379196.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_3755 formate dehydrogenase, beta subunit YP_001379197.1 TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: cytochrome B561; KEGG: ade:Adeh_3756 formate dehydrogenase, gamma subunit YP_001379198.1 TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: ade:Adeh_3757 formate dehydrogenase accessory protein FdhE YP_001379199.1 KEGG: ade:Adeh_1609 hypothetical protein YP_001379200.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_001379201.1 KEGG: ade:Adeh_1813 DNA uptake protein YP_001379202.1 TIGRFAM: MJ0042 family finger-like protein; PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_1812 zinc finger/thioredoxin putative YP_001379203.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_1811 glycosyl transferase, family 2 YP_001379204.1 PFAM: Amidohydrolase 3; KEGG: ade:Adeh_1810 amidohydrolase 3 YP_001379205.1 KEGG: ade:Adeh_1809 hypothetical protein YP_001379207.1 KEGG: rpe:RPE_0250 transposase, IS4 family protein YP_001379208.1 PFAM: UvrD/REP helicase; KEGG: ade:Adeh_1808 UvrD/REP helicase YP_001379209.1 PFAM: Heat shock protein 70; KEGG: ade:Adeh_1807 heat shock protein 70 YP_001379210.1 KEGG: ade:Adeh_1806 hypothetical protein YP_001379211.1 KEGG: ade:Adeh_1805 hypothetical protein YP_001379212.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: mxa:MXAN_7358 transketolase YP_001379213.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: aba:Acid345_2809 sugar-phosphate isomerases, RpiB/LacA/LacB family YP_001379214.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: tte:TTE2334 phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_001379215.1 PFAM: CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pol:Bpro_4152 putative signal-transduction protein with CBS domains YP_001379216.1 PFAM: response regulator receiver; KEGG: pol:Bpro_4150 response regulator receiver domain protein (CheY-like) YP_001379217.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4149 periplasmic sensor signal transduction histidine kinase YP_001379218.1 KEGG: pol:Bpro_4148 hypothetical protein YP_001379219.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ade:Adeh_0444 cation diffusion facilitator family transporter YP_001379220.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_2760 short-chain dehydrogenase/reductase SDR YP_001379221.1 KEGG: sth:STH576 hypothetical protein YP_001379222.1 KEGG: shn:Shewana3_0490 rhodanese domain protein YP_001379223.1 KEGG: ade:Adeh_1781 hypothetical protein YP_001379224.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ade:Adeh_1780 HAD-superfamily hydrolase subfamily IA YP_001379225.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: sus:Acid_2235 large conductance mechanosensitive channel protein YP_001379226.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: ade:Adeh_1779 prephenate dehydratase YP_001379227.1 PFAM: homocysteine S-methyltransferase; KEGG: ade:Adeh_1778 homocysteine S-methyltransferase YP_001379228.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: ade:Adeh_1776 RNA-metabolising metallo-beta-lactamase YP_001379229.1 PFAM: NUDIX hydrolase; KEGG: ade:Adeh_1775 NUDIX hydrolase YP_001379230.1 KEGG: ade:Adeh_1774 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001379231.1 KEGG: ade:Adeh_1773 hypothetical protein YP_001379232.1 PFAM: GrpE protein; KEGG: ade:Adeh_1772 GrpE protein YP_001379233.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ade:Adeh_1771 peptidase S1C, Do YP_001379234.1 KEGG: ade:Adeh_1770 hypothetical protein YP_001379235.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_1769 hypothetical protein YP_001379236.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_1768 ABC transporter, ATPase subunit YP_001379237.1 KEGG: ade:Adeh_1767 hypothetical protein YP_001379238.1 KEGG: sma:SAV1180 protease YP_001379239.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ade:Adeh_1766 Glu/Leu/Phe/Val dehydrogenase YP_001379240.1 catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity YP_001379241.1 PFAM: OsmC family protein; KEGG: rxy:Rxyl_2354 OsmC-like protein YP_001379242.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A1005 transcriptional regulatory protein YP_001379243.1 PFAM: beta-lactamase domain protein; KEGG: ade:Adeh_0354 beta-lactamase YP_001379244.1 KEGG: sth:STH2320 LuxR family transcriptional regulator YP_001379245.1 KEGG: dge:Dgeo_1037 hypothetical protein YP_001379247.1 PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_1737 WD40-like beta propeller protein YP_001379248.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_1736 alpha/beta hydrolase fold-1 YP_001379249.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ade:Adeh_1735 cation diffusion facilitator family transporter YP_001379250.1 KEGG: ade:Adeh_1734 hypothetical protein YP_001379251.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: ade:Adeh_1733 hypothetical protein YP_001379252.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_001379253.1 PFAM: aminotransferase class I and II; KEGG: ade:Adeh_1731 aminotransferase, class I and II YP_001379254.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_3602 tetratricopeptide repeat protein YP_001379256.1 KEGG: mxa:MXAN_4443 hypothetical protein YP_001379257.1 KEGG: ade:Adeh_4223 hypothetical protein YP_001379258.1 KEGG: ade:Adeh_2835 hypothetical protein YP_001379259.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_001379260.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_001379261.1 catalyzes branch migration in Holliday junction intermediates YP_001379262.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: ade:Adeh_1726 protein-L-isoaspartate O-methyltransferase YP_001379263.1 KEGG: ade:Adeh_1725 hypothetical protein YP_001379264.1 PFAM: aminotransferase class I and II; KEGG: ade:Adeh_1724 aminotransferase, class I and II YP_001379265.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ade:Adeh_1723 threonine synthase YP_001379266.1 KEGG: ade:Adeh_1722 hypothetical protein YP_001379267.1 PFAM: thymidylate kinase; KEGG: ade:Adeh_1721 thymidylate kinase YP_001379268.1 PFAM: molybdopterin binding domain; KEGG: ade:Adeh_1720 molybdopterin binding domain protein YP_001379270.1 KEGG: ade:Adeh_1719 hypothetical protein YP_001379271.1 KEGG: ade:Adeh_1718 hypothetical protein YP_001379272.1 PFAM: fatty acid desaturase; KEGG: ade:Adeh_1717 stearoyl-CoA 9-desaturase YP_001379273.1 PFAM: phosphoglucose isomerase (PGI); KEGG: rxy:Rxyl_2677 glucose-6-phosphate isomerase YP_001379274.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_1716 phospholipid/glycerol acyltransferase YP_001379275.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex YP_001379276.1 KEGG: ade:Adeh_1714 hypothetical protein YP_001379277.1 KEGG: ade:Adeh_1713 hypothetical protein YP_001379278.1 KEGG: ade:Adeh_1712 hypothetical protein YP_001379279.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_1711 transcriptional regulator, NifA subfamily, fis family YP_001379280.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_1710 tetratricopeptide repeat protein YP_001379281.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_1709 serine/threonine protein kinase YP_001379282.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: ade:Adeh_1708 NAD-dependent epimerase/dehydratase YP_001379283.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B1236 aldo/keto reductase YP_001379284.1 KEGG: rle:RL2982 putative TetR family transcriptional regulator YP_001379285.1 KEGG: ade:Adeh_1707 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001379286.1 KEGG: ade:Adeh_0625 multi-sensor signal transduction histidine kinase YP_001379287.1 KEGG: ade:Adeh_1705 metallophosphoesterase YP_001379288.1 KEGG: ade:Adeh_1704 hypothetical protein YP_001379289.1 KEGG: ade:Adeh_1703 hypothetical protein YP_001379290.1 KEGG: ade:Adeh_1702 hypothetical protein YP_001379291.1 TIGRFAM: LexA repressor; PFAM: regulatory protein MarR; peptidase S24 S26A and S26B; LexA DNA-binding domain protein; KEGG: ade:Adeh_1701 SOS-response transcriptional repressor, LexA YP_001379292.1 KEGG: ade:Adeh_1700 hypothetical protein YP_001379293.1 PFAM: ABC-1 domain protein; KEGG: ade:Adeh_1699 ubiquinone biosynthesis protein YP_001379294.1 This protein performs the mismatch recognition step during the DNA repair process YP_001379295.1 PFAM: cytochrome c class III; KEGG: ade:Adeh_1697 cytochrome c, class III YP_001379296.1 KEGG: ade:Adeh_1697 cytochrome c, class III YP_001379297.1 PFAM: ThiJ/PfpI domain protein; KEGG: ade:Adeh_1695 ThiJ/PfpI YP_001379298.1 PFAM: cell wall hydrolase/autolysin; KEGG: ade:Adeh_1694 N-acetylmuramoyl-L-alanine amidase YP_001379299.1 TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; GlnD PII-uridylyltransferase; KEGG: ade:Adeh_1692 metal dependent phosphohydrolase YP_001379300.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: ade:Adeh_1691 S6 modification enzyme RimK YP_001379301.1 KEGG: ade:Adeh_1690 hypothetical protein YP_001379302.1 KEGG: ade:Adeh_1689 hypothetical protein YP_001379303.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: ade:Adeh_1688 SUA5/YciO/YrdC/YwlC YP_001379304.1 TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: ade:Adeh_1687 tyrosine recombinase XerD YP_001379305.1 PFAM: peptidase M50; KEGG: ade:Adeh_1686 peptidase M50 YP_001379306.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001379307.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: ade:Adeh_1684 chromosome segregation and condensation protein ScpA YP_001379308.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: ade:Adeh_1683 putative transcriptional regulator YP_001379309.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ade:Adeh_1682 pseudouridine synthase, Rsu YP_001379310.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: mxa:MXAN_3838 PBS lyase heat-like repeat protein YP_001379311.1 PFAM: Secretin/TonB short domain; KEGG: ade:Adeh_1680 hypothetical protein YP_001379312.1 KEGG: ade:Adeh_1679 hypothetical protein YP_001379313.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ade:Adeh_1678 sigma-24 (FecI-like) YP_001379314.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: ade:Adeh_1677 arsenical pump membrane protein YP_001379315.1 PFAM: RNA 3'-terminal phosphate cyclase; KEGG: ade:Adeh_1676 RNA-3'-phosphate cyclase YP_001379316.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: ade:Adeh_1675 magnesium and cobalt transport protein CorA YP_001379317.1 PFAM: protein of unknown function DUF59; KEGG: ade:Adeh_1674 protein of unknown function DUF59 YP_001379318.1 KEGG: ade:Adeh_1673 hypothetical protein YP_001379319.1 KEGG: ade:Adeh_1672 hypothetical protein YP_001379320.1 PFAM: Dual specificity protein phosphatase; KEGG: ade:Adeh_1671 dual specificity protein phosphatase YP_001379321.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ade:Adeh_1667 3-hydroxybutyryl-CoA dehydrogenase YP_001379322.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ade:Adeh_1666 enoyl-CoA hydratase/isomerase YP_001379323.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_1665 butyryl-CoA dehydrogenase YP_001379324.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_1664 butyryl-CoA dehydrogenase YP_001379325.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: ade:Adeh_3116 acetate kinase YP_001379326.1 PFAM: GTP cyclohydrolase II; KEGG: ade:Adeh_1663 GTP cyclohydrolase II YP_001379327.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ade:Adeh_1662 transcriptional regulator, MerR family YP_001379328.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0367 multi-sensor signal transduction histidine kinase YP_001379330.1 KEGG: reh:H16_B0196 DNA repair exonuclease, SbcC YP_001379331.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: azo:azo0199 exonuclease SbcD, putative YP_001379332.1 KEGG: ade:Adeh_4042 HNH endonuclease YP_001379333.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: ade:Adeh_0314 alkylhydroperoxidase AhpD core YP_001379334.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ade:Adeh_0313 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001379335.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_0312 transcriptional regulator, LysR family YP_001379336.1 PFAM: NmrA family protein; KEGG: bba:Bd3174 putative nucleoside-diphosphate-sugar epimerase YP_001379337.1 KEGG: mxa:MXAN_3772 putative lipoprotein YP_001379338.1 PFAM: NUDIX hydrolase; KEGG: ade:Adeh_1657 NUDIX hydrolase YP_001379339.1 PFAM: Pyrrolo-quinoline quinone; KEGG: ade:Adeh_1656 pyrrolo-quinoline quinone enzyme repeat domain protein YP_001379340.1 KEGG: ade:Adeh_1655 hypothetical protein YP_001379341.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_001379342.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: ade:Adeh_1653 small GTP-binding protein Era YP_001379343.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ade:Adeh_1652 peptidylprolyl isomerase YP_001379344.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ade:Adeh_1651 peptidylprolyl isomerase YP_001379345.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: ade:Adeh_1650 ribonuclease III YP_001379346.1 TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: ade:Adeh_1649 LAO/AO transport system ATPase YP_001379347.1 KEGG: ade:Adeh_1648 hypothetical protein YP_001379348.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: gvi:glr1818 maltose transacetylase YP_001379349.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_1647 butyryl-CoA dehydrogenase YP_001379350.1 PFAM: carboxyl transferase; KEGG: ade:Adeh_1646 propionyl-CoA carboxylase YP_001379351.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ade:Adeh_1645 enoyl-CoA hydratase/isomerase YP_001379352.1 PFAM: pyruvate carboxyltransferase; KEGG: ade:Adeh_1644 pyruvate carboxyltransferase YP_001379353.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_001379354.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_001379356.1 PFAM: cyclase/dehydrase; KEGG: ade:Adeh_1641 cyclase/dehydrase YP_001379357.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_001379358.1 PFAM: thioesterase superfamily protein; KEGG: ade:Adeh_1639 4-hydroxybenzoyl-CoA thioesterase YP_001379359.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: ade:Adeh_1638 homoserine dehydrogenase YP_001379360.1 KEGG: ade:Adeh_1637 hypothetical protein YP_001379361.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: ade:Adeh_1636 PBS lyase heat-like repeat protein YP_001379362.1 PFAM: restriction endonuclease; KEGG: ade:Adeh_1635 hypothetical protein YP_001379363.1 SMART: Pyrrolo-quinoline quinone; KEGG: ade:Adeh_1634 WD40-like repeat protein YP_001379364.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_1633 bis(5'nucleosyl)-tetraphosphatase, ApaH YP_001379365.1 PFAM: PfkB domain protein; KEGG: ade:Adeh_1632 carbohydrate kinase, PfkB YP_001379366.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: ade:Adeh_1631 hypothetical protein YP_001379367.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ade:Adeh_1630 hypothetical protein YP_001379368.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_001379369.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: ade:Adeh_1628 succinyl-CoA synthetase, alpha subunit YP_001379370.1 catalyzes the interconversion of succinyl-CoA and succinate YP_001379371.1 Catalyzes the reversible oxidation of malate to oxaloacetate YP_001379372.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: ade:Adeh_1625 isocitrate dehydrogenase, NADP-dependent YP_001379373.1 PFAM: YdjC family protein; KEGG: ade:Adeh_1624 YdjC-like protein YP_001379374.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_1623 PAS/PAC sensor signal transduction histidine kinase YP_001379375.1 KEGG: ade:Adeh_1622 hypothetical protein YP_001379376.1 KEGG: ade:Adeh_1621 hypothetical protein YP_001379377.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_001379378.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ade:Adeh_1619 dihydroorotase, multifunctional complex type YP_001379379.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_001379380.1 PFAM: phosphoribosyltransferase; KEGG: ade:Adeh_1617 phosphoribosyltransferase YP_001379381.1 KEGG: ade:Adeh_1616 hypothetical protein YP_001379382.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: ade:Adeh_1615 peptidase S26A, signal peptidase I YP_001379383.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001379384.1 catalyzes the reduction of ribonucleotides to deoxyribonucleotides; the rate-limiting step in dNTP synthesis YP_001379386.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; KEGG: ade:Adeh_1612 DNA polymerase III, alpha subunit YP_001379387.1 KEGG: ade:Adeh_1611 hypothetical protein YP_001379388.1 KEGG: ade:Adeh_1610 hypothetical protein YP_001379389.1 KEGG: ade:Adeh_1609 hypothetical protein YP_001379390.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ade:Adeh_1608 thioredoxin YP_001379391.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: ade:Adeh_1607 two component transcriptional regulator, fis family YP_001379392.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1606 periplasmic sensor signal transduction histidine kinase YP_001379393.1 KEGG: ade:Adeh_1605 hypothetical protein YP_001379394.1 PFAM: SCP-like extracellular; KEGG: ade:Adeh_1604 allergen V5/TPX-1 related YP_001379395.1 KEGG: mxa:MXAN_4033 hypothetical protein YP_001379396.1 PFAM: Lytic transglycosylase catalytic; KEGG: ade:Adeh_1603 lytic transglycosylase YP_001379397.1 PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: ade:Adeh_1602 3'-5' exonuclease YP_001379398.1 PFAM: Indigoidine synthase A family protein; KEGG: ade:Adeh_1601 indigoidine synthase A like protein YP_001379399.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_1600 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001379400.1 KEGG: ade:Adeh_1599 hypothetical protein YP_001379401.1 PFAM: response regulator receiver; KEGG: ade:Adeh_1598 response regulator receiver domain protein (CheY-like) YP_001379402.1 KEGG: ade:Adeh_1596 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_001379403.1 KEGG: ade:Adeh_1595 flagellar assembly protein FliH, putative YP_001379404.1 Inhibits transcription at high concentrations of nickel YP_001379405.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ade:Adeh_1594 sigma 32 (RpoH) YP_001379406.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; KEGG: ade:Adeh_1593 DNA-directed RNA polymerase, subunit beta-prime YP_001379407.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_001379408.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_001379409.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_001379410.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_001379411.1 binds directly to 23S ribosomal RNA YP_001379412.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouzounis Woese) domain protein; KEGG: ade:Adeh_1587 NusG antitermination factor YP_001379413.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: ade:Adeh_1586 SecE subunit of protein translocation complex YP_001379414.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif YP_001379415.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001379416.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ade:Adeh_1583 RNA methyltransferase TrmH, group 3 YP_001379417.1 KEGG: ade:Adeh_1582 hypothetical protein YP_001379418.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; KEGG: ade:Adeh_1581 S6 modification enzyme RimK YP_001379419.1 TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: ade:Adeh_1580 chaperone DnaK YP_001379420.1 PFAM: diacylglycerol kinase catalytic region; KEGG: ade:Adeh_1579 diacylglycerol kinase YP_001379421.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_4121 multi-sensor signal transduction histidine kinase YP_001379422.1 KEGG: ajs:Ajs_2292 hypothetical protein YP_001379423.1 KEGG: mxa:MXAN_7052 hypothetical protein YP_001379424.1 PFAM: protein of unknown function DUF493; KEGG: ade:Adeh_1578 protein of unknown function DUF493 YP_001379425.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: ade:Adeh_1577 PhoH-like protein YP_001379426.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: ade:Adeh_1576 diguanylate cyclase (GGDEF domain) YP_001379427.1 PFAM: Septum formation initiator; KEGG: ade:Adeh_1575 septum formation initiator YP_001379428.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: ade:Adeh_0191 bacterioferritin YP_001379429.1 PFAM: ApbE family lipoprotein; KEGG: ade:Adeh_1571 ApbE-like lipoprotein YP_001379430.1 KEGG: ade:Adeh_1570 hypothetical protein YP_001379431.1 KEGG: ade:Adeh_1569 hypothetical protein YP_001379432.1 KEGG: ade:Adeh_1568 hypothetical protein YP_001379433.1 KEGG: ade:Adeh_1567 hypothetical protein YP_001379434.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: ade:Adeh_1566 iron (metal) dependent repressor YP_001379436.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: ade:Adeh_1565 small GTP-binding protein domain YP_001379437.1 PFAM: ferric-uptake regulator; KEGG: ade:Adeh_1564 ferric uptake regulator, FUR family YP_001379438.1 PFAM: HEAT domain containing protein; KEGG: ade:Adeh_1563 heat repeat protein YP_001379439.1 KEGG: ade:Adeh_0244 LigA YP_001379440.1 KEGG: ade:Adeh_0885 hypothetical protein YP_001379441.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_1558 hypothetical protein YP_001379442.1 KEGG: ade:Adeh_1557 glutaredoxin YP_001379443.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ade:Adeh_1556 diguanylate cyclase (GGDEF domain) YP_001379444.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_1555 two component, sigma54 specific, transcriptional regulator, fis family YP_001379445.1 PFAM: histidine kinase A domain protein; KEGG: ade:Adeh_1554 histidine kinase YP_001379446.1 KEGG: ade:Adeh_1553 putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like YP_001379447.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ade:Adeh_1552 zinc-binding CMP/dCMP deaminase YP_001379448.1 KEGG: bpm:BURPS1710b_2115 cobalamin biosynthesis protein CbiD YP_001379449.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: ade:Adeh_1551 peptidase S1 and S6, chymotrypsin/Hap YP_001379450.1 PFAM: Heat shock protein 70; KEGG: ade:Adeh_1549 heat shock protein 70 YP_001379451.1 KEGG: ade:Adeh_1548 hypothetical protein YP_001379452.1 binds and unfolds substrates as part of the ClpXP protease YP_001379453.1 KEGG: ade:Adeh_1546 hypothetical protein YP_001379454.1 KEGG: ade:Adeh_1545 hypothetical protein YP_001379455.1 PFAM: tRNA pseudouridine synthase; KEGG: ade:Adeh_1544 tRNA pseudouridine synthase A YP_001379456.1 KEGG: ade:Adeh_1543 CopG-like DNA-binding protein YP_001379457.1 KEGG: ade:Adeh_1542 hypothetical protein YP_001379458.1 PFAM: adenylylsulfate kinase; KEGG: ade:Adeh_1541 adenylylsulfate kinase YP_001379459.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ade:Adeh_1540 UBA/ThiF-type NAD/FAD binding fold YP_001379460.1 KEGG: ade:Adeh_1539 SirA-like protein YP_001379461.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: ade:Adeh_1538 UBA/ThiF-type NAD/FAD binding fold, MoeZ/MoeB YP_001379462.1 KEGG: ade:Adeh_1537 hypothetical protein YP_001379463.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: ade:Adeh_1535 inositol-3-phosphate synthase YP_001379464.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_1534 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001379465.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: ade:Adeh_1533 preprotein translocase, SecG subunit YP_001379466.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_001379467.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_001379468.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: ade:Adeh_1530 glyceraldehyde-3-phosphate dehydrogenase, type I YP_001379469.1 KEGG: ade:Adeh_1529 hypothetical protein YP_001379470.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: ade:Adeh_1528 FAD dependent oxidoreductase YP_001379471.1 KEGG: ade:Adeh_1527 hypothetical protein YP_001379472.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: ade:Adeh_1526 cupin domain protein YP_001379473.1 PFAM: Sporulation domain protein; KEGG: ade:Adeh_1525 sporulation related protein YP_001379474.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_001379475.1 PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_1523 tetratricopeptide repeat protein YP_001379476.1 PFAM: histidine triad (HIT) protein; KEGG: ade:Adeh_1522 histidine triad (HIT) protein YP_001379477.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: ade:Adeh_1521 signal peptide peptidase SppA, 36K type YP_001379478.1 PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mxa:MXAN_1265 putative transporter YP_001379479.1 PFAM: CheW domain protein; KEGG: mxa:MXAN_6947 putative chemotaxis protein, CheW YP_001379480.1 PFAM: MCP methyltransferase CheR-type; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_1196 MCP methyltransferase, CheR-type YP_001379481.1 PFAM: CheW domain protein; KEGG: ade:Adeh_1195 CheW protein YP_001379482.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ade:Adeh_1194 methyl-accepting chemotaxis sensory transducer YP_001379483.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: ade:Adeh_1193 CheA signal transduction histidine kinase YP_001379484.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mxa:MXAN_6952 protein-glutamate methylesterase YP_001379485.1 KEGG: peptidase M20/M25/M40 family protein YP_001379487.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_001379488.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; KEGG: ade:Adeh_1519 hydroxymethylbutenyl pyrophosphate reductase YP_001379489.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_0493 ABC transporter, ATPase subunit YP_001379490.1 KEGG: ade:Adeh_0494 hypothetical protein YP_001379491.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: ade:Adeh_0495 cobalamin (vitamin B12) biosynthesis CbiM YP_001379492.1 KEGG: ade:Adeh_0496 hypothetical protein YP_001379493.1 PFAM: putative esterase; KEGG: ade:Adeh_1518 putative esterase YP_001379494.1 KEGG: mxa:MXAN_2499 hypothetical protein YP_001379495.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: ade:Adeh_1515 cytidylate kinase YP_001379496.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001379497.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: ade:Adeh_1513 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_001379498.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_001379499.1 TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: ade:Adeh_1510 histidyl-tRNA synthetase YP_001379500.1 TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; KEGG: ade:Adeh_1509 phosphatidylserine decarboxylase YP_001379501.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_001379502.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_001379503.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: ade:Adeh_1506 protein of unknown function UPF0025 YP_001379504.1 PFAM: protein of unknown function DUF99; KEGG: mxa:MXAN_0671 hypothetical protein YP_001379505.1 PFAM: glutamine amidotransferase class-II; KEGG: ade:Adeh_1505 glutamine amidotransferase, class-II YP_001379506.1 KEGG: pau:PA14_45100 putative mucoidy inhibitor A YP_001379507.1 PFAM: protein of unknown function DUF1568; KEGG: ade:Adeh_3990 hypothetical protein YP_001379508.1 TIGRFAM: YD repeat protein; KEGG: mxa:MXAN_6679 hypothetical protein YP_001379509.1 PFAM: protein of unknown function DUF1568; KEGG: ade:Adeh_3990 hypothetical protein YP_001379510.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: mxa:MXAN_6679 hypothetical protein YP_001379511.1 TIGRFAM: YD repeat protein; PFAM: Thrombospondin type 3 repeat; YD repeat-containing protein; APHP domain protein; KEGG: gsu:GSU3219 fibronectin type III domain protein YP_001379512.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: sde:Sde_2048 tRNA pseudouridine synthase YP_001379513.1 PFAM: cell surface receptor IPT/TIG domain protein; Ig domain protein group 2 domain protein; peptidase domain protein; LVIVD repeat protein; KEGG: sde:Sde_2049 hypothetical protein YP_001379514.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ppd:Ppro_3588 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001379515.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ade:Adeh_4333 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001379516.1 PFAM: protein of unknown function UPF0079; KEGG: ade:Adeh_1503 protein of unknown function UPF0079 YP_001379517.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: ade:Adeh_1502 hypothetical protein YP_001379518.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: ade:Adeh_1501 holo-(acyl-carrier-protein) synthase YP_001379519.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_001379520.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_001379521.1 KEGG: ade:Adeh_1498 hypothetical protein YP_001379522.1 PFAM: protein of unknown function DUF147; KEGG: ade:Adeh_1497 protein of unknown function DUF147 YP_001379523.1 TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; KEGG: ade:Adeh_1496 dihydropteroate synthase YP_001379524.1 KEGG: ade:Adeh_1495 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001379525.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: ade:Adeh_1494 tRNA(Ile)-lysidine synthetase-like YP_001379526.1 KEGG: ade:Adeh_1493 hypothetical protein YP_001379527.1 KEGG: ade:Adeh_1492 hypothetical protein YP_001379528.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ade:Adeh_1491 ammonium transporter YP_001379529.1 KEGG: ade:Adeh_1490 hypothetical protein YP_001379530.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_1489 hypothetical protein YP_001379531.1 PFAM: protein of unknown function DUF849; KEGG: ade:Adeh_1487 protein of unknown function DUF849 YP_001379532.1 KEGG: ade:Adeh_1486 acyl-CoA hydrolase YP_001379533.1 KEGG: ade:Adeh_1485 cobalamin vitamin B12-binding protein YP_001379534.1 KEGG: ade:Adeh_1484 hypothetical protein YP_001379535.1 PFAM: D-Lysine 56-aminomutase alpha subunit; KEGG: ade:Adeh_1483 lysine 5,6-aminomutase alpha subunit YP_001379536.1 TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: gsu:GSU2568 MiaB-like tRNA modifying enzyme YP_001379537.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_001379538.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1481 response regulator receiver sensor signal transduction histidine kinase YP_001379539.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: ade:Adeh_1480 polynucleotide adenylyltransferase region YP_001379540.1 KEGG: ade:Adeh_1479 hypothetical protein YP_001379541.1 PFAM: CBS domain containing protein; KEGG: ade:Adeh_3298 putative signal-transduction protein with CBS domains YP_001379542.1 KEGG: ade:Adeh_3529 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001379543.1 PFAM: fatty acid desaturase; KEGG: hch:HCH_03837 fatty acid desaturase YP_001379544.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpb:RPB_1968 UbiE/COQ5 methyltransferase YP_001379545.1 PFAM: Radical SAM domain protein; KEGG: chy:CHY_0556 radical SAM domain protein YP_001379546.1 PFAM: Thioredoxin domain; KEGG: chy:CHY_0560 thioredoxin/thioredoxin-disulfide reductase YP_001379547.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: chy:CHY_0560 thioredoxin/thioredoxin-disulfide reductase YP_001379548.1 KEGG: ade:Adeh_1453 hypothetical protein YP_001379549.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_1452 metallophosphoesterase YP_001379550.1 TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dar:Daro_3539 glyoxalase I YP_001379551.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_1782 PAS/PAC sensor signal transduction histidine kinase YP_001379552.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: ade:Adeh_0614 response regulator receiver (CheY-like) modulated CheB methylesterase YP_001379553.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mxa:MXAN_6951 sensor histidine kinase/response regulator YP_001379554.1 PFAM: chemotaxis sensory transducer; KEGG: nmu:Nmul_A0332 methyl-accepting chemotaxis sensory transducer YP_001379555.1 PFAM: CheW domain protein YP_001379556.1 PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: mag:amb1963 chemotaxis protein methyltransferase CheR YP_001379557.1 PFAM: CheW domain protein; KEGG: gsu:GSU2220 chemotaxis protein CheW YP_001379558.1 KEGG: ade:Adeh_1151 hypothetical protein YP_001379559.1 PFAM: glycoside hydrolase 15-related; KEGG: ade:Adeh_1442 glycoside hydrolase 15-related YP_001379560.1 KEGG: ade:Adeh_3144 Co/Zn/Cd efflux system component YP_001379562.1 KEGG: ade:Adeh_0501 hypothetical protein YP_001379563.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_0502 tetratricopeptide TPR_2 YP_001379564.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0503 periplasmic sensor signal transduction histidine kinase YP_001379565.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0504 two component, sigma54 specific, transcriptional regulator, fis family YP_001379566.1 TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: sfu:Sfum_1736 2-dehydropantoate 2-reductase YP_001379567.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_0985 putative cobalt-zinc-cadmium resistance protein YP_001379568.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mxa:MXAN_3671 heavy metal efflux pump, CzcA family YP_001379569.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mxa:MXAN_3672 putative cation efflux system protein CzcB YP_001379570.1 KEGG: mxa:MXAN_3673 hypothetical protein YP_001379572.1 KEGG: ade:Adeh_3303 hypothetical protein YP_001379573.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_7180 sensor histidine kinase YP_001379574.1 PFAM: Chloride channel core; KEGG: ade:Adeh_1443 Cl-channel, voltage gated YP_001379575.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; KEGG: sus:Acid_1155 HAD-superfamily hydrolase, subfamily IIB YP_001379576.1 PFAM: glycosyl transferase family 20; KEGG: ade:Adeh_1441 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_001379577.1 PFAM: response regulator receiver; KEGG: ade:Adeh_4142 response regulator receiver domain protein (CheY-like) YP_001379578.1 PFAM: GCN5-related N-acetyltransferase; AMP-dependent synthetase and ligase; KEGG: ade:Adeh_1437 AMP-dependent synthetase and ligase YP_001379579.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: ade:Adeh_1436 homocitrate synthase YP_001379580.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_1435 protein of unknown function DUF6, transmembrane YP_001379581.1 PFAM: Patatin; KEGG: ade:Adeh_1434 patatin YP_001379582.1 PFAM: amino acid-binding ACT domain protein; KEGG: ade:Adeh_1433 ACT domain-containing protein YP_001379583.1 catalyzes the formation of pyruvate from D-cysteine YP_001379584.1 KEGG: ade:Adeh_1431 hypothetical protein YP_001379585.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mxa:MXAN_2683 methyl accepting chemotaxis protein YP_001379586.1 PFAM: DTW domain containing protein; KEGG: ade:Adeh_1429 conserved hypothetical protein, DTW domain YP_001379587.1 TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; KEGG: ade:Adeh_1428 queuine tRNA-ribosyltransferase YP_001379588.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_1427 alpha/beta hydrolase fold-1 YP_001379589.1 KEGG: mxa:MXAN_5565 acyltransferase family protein YP_001379590.1 PFAM: cytochrome c class I; KEGG: ade:Adeh_1425 cytochrome c, class I YP_001379591.1 PFAM: Polysulphide reductase NrfD; KEGG: ade:Adeh_1424 polysulphide reductase, NrfD YP_001379592.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_1423 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001379593.1 KEGG: ade:Adeh_1422 hypothetical protein YP_001379594.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mxa:MXAN_6449 B12 binding/radical SAM domain protein YP_001379595.1 KEGG: ade:Adeh_4128 HNH endonuclease YP_001379596.1 PFAM: Abortive infection protein; KEGG: rxy:Rxyl_0101 abortive infection protein YP_001379597.1 KEGG: ade:Adeh_2868 hypothetical protein YP_001379598.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: ade:Adeh_1421 Cl-channel, voltage gated YP_001379601.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_1420 major facilitator superfamily MFS_1 transporter YP_001379602.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: ade:Adeh_1419 peptidase M1, membrane alanine aminopeptidase YP_001379603.1 PFAM: Ferritin Dps family protein; KEGG: dde:Dde_1791 ferritin YP_001379604.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_1417 acyl-CoA dehydrogenase YP_001379605.1 KEGG: ade:Adeh_3797 hypothetical protein YP_001379606.1 KEGG: ade:Adeh_2241 hypothetical protein YP_001379607.1 KEGG: ade:Adeh_1408 hypothetical protein YP_001379608.1 PFAM: protein of unknown function DUF323; KEGG: ade:Adeh_1407 protein of unknown function DUF323 YP_001379609.1 PFAM: DNA mismatch repair protein MutS domain protein; KEGG: ade:Adeh_1406 DNA mismatch repair protein MutS-like YP_001379610.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_001379611.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_1404 hemerythrin HHE cation binding protein YP_001379612.1 KEGG: ade:Adeh_1403 cytochrome b subunit of nitric oxide reductase YP_001379613.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_1402 hemerythrin HHE cation binding protein YP_001379614.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_1401 transcriptional regulator, NifA subfamily, fis family YP_001379615.1 TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: ade:Adeh_1400 homoserine O-acetyltransferase YP_001379616.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: ade:Adeh_1335 peptidase S9, dipeptidylpeptidase YP_001379617.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: aha:AHA_3078 molybdopterin biosynthesis MoeA protein YP_001379618.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ade:Adeh_1334 molybdopterin biosynthesis protein MoeA YP_001379619.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: ade:Adeh_1333 transcriptional regulator, Crp/Fnr family YP_001379620.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ade:Adeh_1332 sec-independent translocation protein MttA/Hcf106 YP_001379621.1 PFAM: UspA domain protein; KEGG: ade:Adeh_1331 universal stress protein UspA YP_001379622.1 PFAM: CBS domain containing protein; KEGG: ade:Adeh_1330 putative signal transduction protein with CBS domains YP_001379623.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1329 histidine kinase YP_001379624.1 PFAM: response regulator receiver; KEGG: ade:Adeh_1328 response regulator receiver domain protein (CheY-like) YP_001379625.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1327 response regulator receiver sensor signal transduction histidine kinase YP_001379626.1 KEGG: ade:Adeh_3854 hypothetical protein YP_001379627.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_1326 two component, sigma54 specific, transcriptional regulator, fis family YP_001379628.1 PFAM: Radical SAM domain protein; KEGG: ade:Adeh_1325 radical SAM YP_001379629.1 KEGG: ade:Adeh_1324 transcriptional regulator, TraR/DksA family YP_001379630.1 PFAM: isochorismatase hydrolase; KEGG: ade:Adeh_1318 nicotinamidase YP_001379631.1 TIGRFAM: metal dependent phophohydrolase; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: ade:Adeh_1317 metal dependent phosphohydrolase YP_001379632.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ade:Adeh_1316 HAD-superfamily subfamily IB, PSPase-like YP_001379633.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: ade:Adeh_1315 TatD-related deoxyribonuclease YP_001379634.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; tRNA synthetase class I (M); KEGG: ade:Adeh_1314 methionyl-tRNA synthetase YP_001379635.1 PFAM: DNA polymerase III delta; KEGG: ade:Adeh_1313 DNA polymerase III, delta YP_001379636.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: ade:Adeh_1312 DNA polymerase III, delta prime subunit YP_001379637.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gvi:gll0099 two-component hybrid sensor and regulator YP_001379638.1 PFAM: DivIVA family protein; KEGG: ade:Adeh_1311 DivIVA YP_001379639.1 PFAM: carbonic anhydrase; KEGG: gme:Gmet_1242 carbonic anhydrase YP_001379640.1 KEGG: ade:Adeh_1310 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_001379641.1 PFAM: Forkhead-associated protein; KEGG: ade:Adeh_1309 FHA domain containing protein YP_001379642.1 KEGG: ade:Adeh_1308 hypothetical protein YP_001379643.1 KEGG: ade:Adeh_1307 hypothetical protein YP_001379644.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: ade:Adeh_1306 glycyl-tRNA synthetase, beta subunit YP_001379645.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001379646.1 PFAM: PfkB domain protein; KEGG: ade:Adeh_1304 carbohydrate kinase, PfkB YP_001379647.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: ade:Adeh_1303 DNA repair protein RecO YP_001379648.1 KEGG: ade:Adeh_1302 hypothetical protein YP_001379649.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_1301 tetratricopeptide repeat protein YP_001379650.1 KEGG: ade:Adeh_1300 hypothetical protein YP_001379651.1 KEGG: ade:Adeh_1299 hypothetical protein YP_001379652.1 PFAM: Radical SAM domain protein; KEGG: ade:Adeh_1298 radical SAM YP_001379653.1 PFAM: Lytic transglycosylase catalytic; KEGG: ade:Adeh_1297 lytic transglycosylase, catalytic YP_001379654.1 KEGG: ade:Adeh_1296 hypothetical protein YP_001379655.1 KEGG: ade:Adeh_1295 hypothetical protein YP_001379656.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001379657.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_1293 ribosomal-protein-alanine acetyltransferase YP_001379658.1 KEGG: ade:Adeh_1292 hypothetical protein YP_001379659.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: ade:Adeh_1291 chaperone DnaJ-like YP_001379660.1 KEGG: ade:Adeh_1290 hypothetical protein YP_001379661.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_1289 glycerol-3-phosphate O-acyltransferase YP_001379662.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: ade:Adeh_1288 acetyl-CoA hydrolase YP_001379663.1 PFAM: inositol monophosphatase; KEGG: ade:Adeh_1287 inositol monophosphatase YP_001379664.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_1286 GCN5-related N-acetyltransferase YP_001379665.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_1285 AAA ATPase YP_001379666.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_1284 type II secretion system protein E YP_001379667.1 TIGRFAM: putative regulatory protein, FmdB family; KEGG: sfu:Sfum_1304 putative regulatory protein, FmdB family YP_001379668.1 KEGG: ade:Adeh_0656 hypothetical protein YP_001379669.1 KEGG: ade:Adeh_1283 hypothetical protein YP_001379670.1 PFAM: Inorganic pyrophosphatase; KEGG: ade:Adeh_1282 inorganic diphosphatase YP_001379671.1 KEGG: ade:Adeh_1281 serine O-acetyltransferase YP_001379672.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ade:Adeh_1280 cysteine synthase A YP_001379673.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_001379674.1 KEGG: ade:Adeh_4088 hypothetical protein YP_001379675.1 PFAM: cytochrome c class I; KEGG: ade:Adeh_1278 cytochrome c, class I YP_001379676.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_1277 periplasmic sensor signal transduction histidine kinase YP_001379677.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_1276 two component, sigma54 specific, transcriptional regulator, fis family YP_001379678.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_001379679.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mxa:MXAN_3345 cold-shock protein, CspA family YP_001379680.1 KEGG: mxa:MXAN_1618 hypothetical protein YP_001379681.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001379682.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: ade:Adeh_1272 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001379683.1 PFAM: transcription factor CarD; KEGG: ade:Adeh_1271 transcriptional regulator, CarD family YP_001379684.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: ade:Adeh_1270 DNA internalization-related competence protein ComEC/Rec2 YP_001379685.1 KEGG: ade:Adeh_1269 hypothetical protein YP_001379686.1 PFAM: Forkhead-associated protein; KEGG: ade:Adeh_1268 hypothetical protein YP_001379687.1 KEGG: ade:Adeh_1267 hypothetical protein YP_001379688.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_1266 tetratricopeptide repeat protein YP_001379689.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_001379690.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: ade:Adeh_1264 histidine--tRNA ligase YP_001379691.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_001379692.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_1261 transcriptional regulator, TetR family YP_001379693.1 KEGG: ade:Adeh_1260 organic solvent tolerance protein OstA-like YP_001379694.1 KEGG: ade:Adeh_1259 hypothetical protein YP_001379695.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ade:Adeh_1258 FolC bifunctional protein YP_001379696.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: ade:Adeh_1257 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_001379697.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_001379698.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: ade:Adeh_1254 phosphoribosylglycinamide formyltransferase YP_001379699.1 KEGG: ade:Adeh_1253 phytoene dehydrogenase YP_001379700.1 required for 70S ribosome assembly YP_001379701.1 KEGG: ade:Adeh_1251 hypothetical protein YP_001379702.1 PFAM: adenosine/AMP deaminase; KEGG: ade:Adeh_1249 adenosine deaminase YP_001379703.1 KEGG: ade:Adeh_1248 hypothetical protein YP_001379705.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_001379706.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_1246 hypothetical protein YP_001379707.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_001379708.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_001379709.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_001379710.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_001379711.1 catalyzes the formation of methylglyoxal from glycerone phosphate YP_001379712.1 TIGRFAM: TonB family protein; KEGG: ade:Adeh_1239 TonB-like protein YP_001379713.1 TIGRFAM: TonB family protein; KEGG: ade:Adeh_1239 TonB-like protein YP_001379714.1 PFAM: glycosyl transferase family 51; KEGG: ade:Adeh_1238 glycosyl transferase, family 51 YP_001379715.1 KEGG: ade:Adeh_1237 hypothetical protein YP_001379716.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001379717.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ade:Adeh_1235 cold-shock DNA-binding domain protein YP_001379718.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_1234 tetratricopeptide repeat protein YP_001379719.1 KEGG: ade:Adeh_1233 hypothetical protein YP_001379720.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_001379721.1 PFAM: aminodeoxychorismate lyase; KEGG: ade:Adeh_1231 aminodeoxychorismate lyase YP_001379722.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: ade:Adeh_1230 putative serine protein kinase, PrkA YP_001379723.1 PFAM: protein of unknown function DUF444; KEGG: ade:Adeh_1229 protein of unknown function DUF444 YP_001379724.1 PFAM: SpoVR family protein; KEGG: ade:Adeh_1228 SpoVR YP_001379725.1 PFAM: peptidase M23B; KEGG: ade:Adeh_1227 peptidase M23B YP_001379728.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: ade:Adeh_1226 putative PAS/PAC sensor protein YP_001379729.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_1225 DEAD/DEAH box helicase YP_001379730.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; KEGG: ade:Adeh_1224 sigma 32 (RpoH) YP_001379731.1 KEGG: ade:Adeh_1223 membrane protein YP_001379732.1 KEGG: ade:Adeh_1222 hypothetical protein YP_001379733.1 PFAM: protein of unknown function DUF1355; KEGG: ade:Adeh_1221 protein of unknown function DUF1355 YP_001379734.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ade:Adeh_1220 response regulator receiver domain protein (CheY-like) YP_001379735.1 KEGG: ade:Adeh_1219 hypothetical protein YP_001379736.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ade:Adeh_1218 haloacid dehalogenase-like hydrolase YP_001379737.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_1217 short-chain dehydrogenase/reductase SDR YP_001379738.1 KEGG: ade:Adeh_1216 putative ferredoxin YP_001379739.1 KEGG: ade:Adeh_1215 hypothetical protein YP_001379740.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV1357 putative alcohol dehydrogenase YP_001379741.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pau:PA14_35140 putative transcriptional regulator, AraC family YP_001379742.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; KEGG: fra:Francci3_2013 phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like YP_001379743.1 KEGG: bcz:BCZK2825 phosphoenolpyruvate synthase YP_001379744.1 PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: ade:Adeh_0402 pirin-like YP_001379745.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: ade:Adeh_1206 multi-sensor signal transduction histidine kinase YP_001379746.1 KEGG: ade:Adeh_1205 hypothetical protein YP_001379747.1 TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit; KEGG: ade:Adeh_1204 V-type ATPase, D subunit YP_001379748.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex YP_001379749.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex YP_001379750.1 KEGG: ade:Adeh_1201 V-type ATP synthase, F subunit YP_001379751.1 PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: ade:Adeh_1200 hypothetical protein YP_001379752.1 PFAM: H+transporting two-sector ATPase E subunit; KEGG: ade:Adeh_1199 hypothetical protein YP_001379753.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: ade:Adeh_1198 H+-transporting two-sector ATPase, C subunit YP_001379754.1 PFAM: V-type ATPase 116 kDa subunit; KEGG: ade:Adeh_1197 V-type ATPase, 116 kDa subunit YP_001379755.1 PFAM: NUDIX hydrolase; KEGG: ade:Adeh_1182 NUDIX hydrolase YP_001379756.1 PFAM: protein of unknown function DUF763; KEGG: mlo:mlr6856 hypothetical protein YP_001379757.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: ade:Adeh_1181 phage SPO1 DNA polymerase-related protein YP_001379758.1 Essential for recycling GMP and indirectly, cGMP YP_001379759.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: ade:Adeh_2607 hypothetical protein YP_001379760.1 PFAM: protein of unknown function DUF343; KEGG: ade:Adeh_2608 protein of unknown function DUF343 YP_001379761.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_2609 glycosyl transferase, group 1 YP_001379762.1 TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: ade:Adeh_2610 cytidyltransferase-related YP_001379763.1 PFAM: PfkB domain protein; KEGG: ade:Adeh_2611 carbohydrate kinase, PfkB YP_001379764.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: ade:Adeh_2612 lipid A biosynthesis acyltransferase YP_001379765.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; KEGG: ade:Adeh_2613 tetraacyldisaccharide 4'-kinase YP_001379766.1 TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: ade:Adeh_2614 lipopolysaccharide heptosyltransferase II YP_001379767.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: ade:Adeh_2615 three-deoxy-D-manno-octulosonic-acid transferase-like YP_001379768.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ade:Adeh_2616 phosphoesterase, PHP-like YP_001379769.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2617 ABC multidrug efflux pump, fused ATPase and inner membrane subunits YP_001379770.1 PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: ade:Adeh_2618 elongation factor G-like YP_001379771.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_2619 AMP-dependent synthetase and ligase YP_001379772.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ade:Adeh_2623 multiple antibiotic resistance (MarC)-related proteins YP_001379773.1 PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_2624 dolichyl-phosphate beta-D-mannosyltransferase YP_001379774.1 TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; KEGG: ade:Adeh_2625 lipid-A-disaccharide synthase YP_001379775.1 KEGG: ade:Adeh_0169 hypothetical protein YP_001379776.1 KEGG: ade:Adeh_2626 hypothetical protein YP_001379777.1 PFAM: regulatory protein ArsR; KEGG: ade:Adeh_2627 transcriptional regulator, ArsR family YP_001379778.1 KEGG: ade:Adeh_0972 cytochrome c family protein YP_001379779.1 KEGG: ade:Adeh_0973 hypothetical protein YP_001379780.1 KEGG: ade:Adeh_2629 hypothetical protein YP_001379781.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ade:Adeh_2630 protein of unknown function DUF395, YeeE/YedE YP_001379782.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: ade:Adeh_2634 multi-sensor signal transduction histidine kinase YP_001379783.1 PFAM: response regulator receiver; KEGG: ade:Adeh_2635 response regulator receiver domain protein (CheY-like) YP_001379784.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; KEGG: rle:pRL110010 putative copper-transporting p-type ATPase YP_001379785.1 KEGG: ade:Adeh_3781 LigA YP_001379786.1 PFAM: conserved hypothetical protein 730; KEGG: pen:PSEEN4924 hypothetical protein YP_001379787.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: ade:Adeh_2636 succinate dehydrogenase, cytochrome b558 subunit YP_001379788.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001379789.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_2638 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001379790.1 KEGG: abo:ABO_2490 hypothetical protein YP_001379791.1 KEGG: mxa:MXAN_3260 hypothetical protein YP_001379792.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_2639 glycosyl transferase, group 1 YP_001379793.1 PFAM: O-antigen polymerase; KEGG: ade:Adeh_2640 O-antigen polymerase YP_001379794.1 PFAM: polysaccharide deacetylase; KEGG: ade:Adeh_2761 polysaccharide deacetylase YP_001379795.1 KEGG: ade:Adeh_2643 cellulose biosynthesis (CelD)-like protein YP_001379796.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ade:Adeh_2644 DegT/DnrJ/EryC1/StrS aminotransferase YP_001379797.1 KEGG: ade:Adeh_2645 cellulose biosynthesis (CelD)-like protein YP_001379798.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: ade:Adeh_2646 hypothetical protein YP_001379799.1 PFAM: sugar transferase; KEGG: ade:Adeh_2647 sugar transferase YP_001379800.1 KEGG: ade:Adeh_2648 tyrosine kinase YP_001379801.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ade:Adeh_2649 lipopolysaccharide biosynthesis YP_001379802.1 KEGG: mxa:MXAN_3226 hypothetical protein YP_001379803.1 PFAM: polysaccharide export protein; KEGG: ade:Adeh_2650 polysaccharide export protein YP_001379805.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_2651 two component, sigma54 specific, transcriptional regulator, fis family YP_001379806.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mhu:Mhun_0385 PHP-like YP_001379807.1 PFAM: sugar transferase; KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase YP_001379808.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; KEGG: sme:SMb21227 hypothetical protein YP_001379809.1 KEGG: ade:Adeh_1151 hypothetical protein YP_001379810.1 KEGG: ade:Adeh_2774 hypothetical protein YP_001379812.1 KEGG: ade:Adeh_2463 hypothetical protein YP_001379813.1 PFAM: glycosyl transferase group 1; KEGG: sth:STH1101 glycosyl transferase YP_001379814.1 PFAM: polysaccharide biosynthesis protein; KEGG: ade:Adeh_2770 polysaccharide biosynthesis protein YP_001379815.1 PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_0689 glycosyl transferase, group 1 YP_001379816.1 PFAM: glycosyl transferase group 1; KEGG: capM; capsular polysaccharide biosynthesis glycosyl transferase YP_001379817.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ade:Adeh_4274 tyrosine kinase YP_001379818.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bsu:BG11873 similar to spore coat polysaccharide biosynthesis YP_001379819.1 KEGG: cth:Cthe_2342 hypothetical protein YP_001379820.1 PFAM: UBA/THIF-type NAD/FAD binding protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gme:Gmet_1338 polysaccharide biosynthesis protein CapD YP_001379821.1 TIGRFAM: SpoIID/LytB domain; PFAM: Stage II sporulation D domain protein; KEGG: ade:Adeh_2653 sporulation protein, amidase enhancer YP_001379822.1 PFAM: histidine kinase HAMP region domain protein; KEGG: mxa:MXAN_5796 HAMP domain protein YP_001379823.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: mxa:MXAN_5200 hypothetical protein YP_001379824.1 PFAM: aminotransferase class IV; KEGG: ade:Adeh_2654 D-alanine transaminase YP_001379825.1 KEGG: ade:Adeh_2655 hypothetical protein YP_001379827.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ade:Adeh_2662 endonuclease/exonuclease/phosphatase YP_001379828.1 KEGG: ade:Adeh_2663 hypothetical protein YP_001379829.1 KEGG: ade:Adeh_2664 hypothetical protein YP_001379830.1 KEGG: ade:Adeh_2666 hypothetical protein YP_001379831.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_2667 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001379832.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ade:Adeh_2668 cysteine synthase A YP_001379833.1 KEGG: ade:Adeh_2669 hypothetical protein YP_001379834.1 PFAM: phage integrase family protein; KEGG: ade:Adeh_1462 phage integrase YP_001379835.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pme:NATL1_00301 HNH endonuclease:HNH nuclease YP_001379838.1 KEGG: ade:Adeh_3964 RecA protein YP_001379841.1 PFAM: Resolvase domain; KEGG: ade:Adeh_2331 resolvase-like YP_001379844.1 KEGG: ade:Adeh_3011 hypothetical protein YP_001379845.1 PFAM: peptidase M48 Ste24p; KEGG: ade:Adeh_3534 peptidase M48, Ste24p YP_001379846.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: ade:Adeh_3533 protein of unknown function DUF898 YP_001379848.1 KEGG: mpt:Mpe_A0812 osmosensitive K+ channel histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001379850.1 KEGG: mxa:MXAN_5485 hypothetical protein YP_001379851.1 PFAM: protein of unknown function DUF1452; KEGG: ade:Adeh_2673 protein of unknown function DUF1452 YP_001379852.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: ade:Adeh_2676 5,10-methylenetetrahydrofolate reductase YP_001379853.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ade:Adeh_2677 GreA/GreB family elongation factor YP_001379854.1 KEGG: ade:Adeh_2678 hypothetical protein YP_001379855.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ade:Adeh_2679 endonuclease/exonuclease/phosphatase YP_001379856.1 KEGG: ade:Adeh_2680 hypothetical protein YP_001379857.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_001379858.1 KEGG: ade:Adeh_2682 hypothetical protein YP_001379859.1 KEGG: ade:Adeh_2683 hypothetical protein YP_001379860.1 TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; KEGG: ade:Adeh_2684 dephospho-CoA kinase YP_001379861.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: ade:Adeh_2685 NAD-dependent epimerase/dehydratase YP_001379862.1 PFAM: MaoC domain protein dehydratase; KEGG: ade:Adeh_2686 MaoC-like dehydratase YP_001379863.1 KEGG: ade:Adeh_2687 hypothetical protein YP_001379865.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis YP_001379866.1 KEGG: ade:Adeh_2674 hypothetical protein YP_001379867.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_2688 hypothetical protein YP_001379868.1 PFAM: Heat shock protein 70; KEGG: ade:Adeh_2689 heat shock protein 70 YP_001379869.1 PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_2690 tetratricopeptide repeat protein YP_001379870.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: ade:Adeh_2691 ornithine carbamoyltransferase YP_001379871.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: ade:Adeh_2692 acetylornithine/succinylornithine aminotransferase YP_001379872.1 heat shock protein involved in degradation of misfolded proteins YP_001379873.1 heat shock protein involved in degradation of misfolded proteins YP_001379874.1 TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: ade:Adeh_2695 tyrosine recombinase XerC YP_001379875.1 KEGG: ade:Adeh_2696 hypothetical protein YP_001379876.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_001379877.1 KEGG: ade:Adeh_2698 transcriptional regulator, TraR/DksA family YP_001379878.1 KEGG: ade:Adeh_2699 DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein YP_001379879.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: ade:Adeh_2700 DNA processing protein DprA, putative YP_001379880.1 PFAM: Peptidoglycan-binding LysM; KEGG: ade:Adeh_2701 peptidoglycan-binding LysM YP_001379881.1 KEGG: ade:Adeh_2702 hypothetical protein YP_001379882.1 PFAM: protein of unknown function DUF152; KEGG: ade:Adeh_2703 protein of unknown function DUF152 YP_001379883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: ade:Adeh_2704 diguanylate cyclase (GGDEF domain) YP_001379884.1 PFAM: response regulator receiver; KEGG: ade:Adeh_2705 response regulator receiver YP_001379885.1 KEGG: ade:Adeh_2706 hypothetical protein YP_001379886.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_2707 metallophosphoesterase YP_001379887.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_2708 ATPase associated with various cellular activities, AAA-5 YP_001379888.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: ade:Adeh_2709 hypothetical protein YP_001379889.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_2710 glycosyl transferase, group 1 YP_001379890.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ade:Adeh_2714 twitching motility protein YP_001379891.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_2715 hypothetical protein YP_001379892.1 KEGG: tfu:Tfu_2436 hypothetical protein YP_001379893.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: ade:Adeh_2716 peptide chain release factor 2 YP_001379894.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ade:Adeh_2717 apolipoprotein N-acyltransferase YP_001379895.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: ade:Adeh_2718 CopG-like DNA-binding protein YP_001379896.1 PFAM: protein of unknown function UPF0054; KEGG: ade:Adeh_2719 protein of unknown function UPF0054 YP_001379897.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; SMART: metal-dependent phosphohydrolase HD region; KEGG: ade:Adeh_2720 metal dependent phosphohydrolase YP_001379898.1 PFAM: PhoH family protein; KH type 1 domain protein; KEGG: ade:Adeh_2721 PhoH-like protein YP_001379899.1 KEGG: ade:Adeh_2722 hypothetical protein YP_001379900.1 PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_2723 tetratricopeptide repeat protein YP_001379901.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: ade:Adeh_2724 MazG family protein YP_001379902.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_001379903.1 KEGG: ade:Adeh_2726 hypothetical protein YP_001379904.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: ade:Adeh_2727 leucyl-tRNA synthetase YP_001379905.1 TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: ade:Adeh_2728 asparaginyl-tRNA synthetase YP_001379906.1 KEGG: ade:Adeh_4253 hypothetical protein YP_001379907.1 SMART: HNH nuclease; KEGG: ade:Adeh_2806 HNH endonuclease YP_001379908.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: ade:Adeh_2099 phosphoesterase, PA-phosphatase related YP_001379909.1 PFAM: virulence factor family protein; KEGG: ade:Adeh_2258 type IV secretory pathway VirJ component YP_001379910.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: ade:Adeh_2257 hypothetical protein YP_001379911.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: ade:Adeh_2737 hypothetical protein YP_001379912.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: ade:Adeh_2738 NusB antitermination factor YP_001379913.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_001379914.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: ade:Adeh_2740 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001379915.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_001379916.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_2742 riboflavin biosynthesis protein RibD YP_001379917.1 PFAM: ATP-cone domain protein; KEGG: ade:Adeh_2743 protein of unknown function DUF193 YP_001379918.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001379919.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: ade:Adeh_2745 ribose 5-phosphate isomerase B YP_001379920.1 PFAM: Beta-ketoacyl synthase; KEGG: ade:Adeh_2746 beta-ketoacyl synthase YP_001379921.1 carries the fatty acid chain in fatty acid biosynthesis YP_001379922.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_2748 3-oxoacyl-(acyl-carrier-protein) reductase YP_001379923.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: ade:Adeh_2749 malonyl CoA-acyl carrier protein transacylase YP_001379924.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: ade:Adeh_2750 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001379925.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_001379926.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_001379927.1 PFAM: protein of unknown function DUF177; KEGG: ade:Adeh_2753 protein of unknown function DUF177 YP_001379928.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ade:Adeh_2754 two component transcriptional regulator, LuxR family YP_001379929.1 KEGG: ade:Adeh_2755 hypothetical protein YP_001379930.1 KEGG: ade:Adeh_2756 hypothetical protein YP_001379931.1 KEGG: ade:Adeh_2757 hypothetical protein YP_001379932.1 PFAM: cytochrome c assembly protein; KEGG: ade:Adeh_2194 cytochrome c assembly protein YP_001379933.1 TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ade:Adeh_2791 glutamate synthase (NADPH), homotetrameric YP_001379934.1 PFAM: Rhomboid family protein; KEGG: ade:Adeh_2794 rhomboid-like protein YP_001379935.1 PFAM: protein of unknown function UPF0047; KEGG: mxa:MXAN_2547 conserved hypothetical protein TIGR00149 YP_001379936.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: ade:Adeh_3017 hemerythrin-like, metal-binding protein YP_001379937.1 phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_001379938.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY1040 hypothetical protein YP_001379939.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2801 ABC transporter, ATPase subunit YP_001379940.1 PFAM: response regulator receiver; KEGG: ade:Adeh_2803 response regulator receiver domain protein (CheY-like) YP_001379942.1 PFAM: cytochrome c oxidase subunit I; KEGG: bba:Bd2599 nitric-oxide reductase subunit B YP_001379943.1 PFAM: cytochrome c class I; KEGG: bba:Bd2601 nitric oxide reductase, cytochrome c-containing subunit YP_001379944.1 KEGG: mca:MCA1769 cytochrome c peroxidase family protein YP_001379945.1 PFAM: uncharacterised conserved protein UCP033563; KEGG: ade:Adeh_2814 uncharacterised conserved protein UCP033563 YP_001379946.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_2815 cytochrome c like protein YP_001379947.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_2815 cytochrome c like protein YP_001379948.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_2818 short-chain dehydrogenase/reductase SDR YP_001379949.1 PFAM: acyltransferase 3; KEGG: ade:Adeh_2832 acyltransferase 3 YP_001379950.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: sus:Acid_6510 cytochrome-c peroxidase YP_001379951.1 KEGG: rpe:RPE_0250 transposase, IS4 family protein YP_001379952.1 KEGG: ade:Adeh_2837 hypothetical protein YP_001379953.1 KEGG: ade:Adeh_2838 hypothetical protein YP_001379954.1 catalyzes the ATP-dependent breakage, passage, and rejoining of double-stranded DNA YP_001379955.1 relaxes both positive and negative superturns and exhibits a strong decatenase activity; the B subunit binds ATP YP_001379956.1 PFAM: peptidase M48 Ste24p; KEGG: ade:Adeh_2841 peptidase M48, Ste24p YP_001379957.1 KEGG: ade:Adeh_2842 hypothetical protein YP_001379958.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ade:Adeh_2843 zinc-binding alcohol dehydrogenase YP_001379959.1 PFAM: NUDIX hydrolase; KEGG: ade:Adeh_2845 hypothetical protein YP_001379960.1 TIGRFAM: putative regulatory protein, FmdB family; KEGG: mxa:MXAN_5424 hypothetical protein YP_001379961.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: mxa:MXAN_2350 methionine-R-sulfoxide reductase YP_001379962.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mxa:MXAN_6310 AhpC/TSA family protein YP_001379963.1 KEGG: ade:Adeh_2847 hypothetical protein YP_001379964.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: ade:Adeh_2848 LigA YP_001379965.1 KEGG: ade:Adeh_2126 hypothetical protein YP_001379966.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_2849 protein of unknown function DUF6, transmembrane YP_001379967.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: ade:Adeh_2853 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001379968.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ade:Adeh_2855 DNA methylase N-4/N-6 YP_001379969.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ade:Adeh_2856 CDP-alcohol phosphatidyltransferase YP_001379970.1 PFAM: transcription factor CarD; KEGG: ade:Adeh_2857 transcriptional regulator, CarD family YP_001379971.1 KEGG: ade:Adeh_2858 hypothetical protein YP_001379972.1 KEGG: ade:Adeh_2859 hypothetical protein YP_001379973.1 KEGG: ade:Adeh_2860 hypothetical protein YP_001379974.1 PFAM: sodium:dicarboxylate symporter; KEGG: ade:Adeh_2861 sodium/dicarboxylate symporter YP_001379975.1 PFAM: UspA domain protein; KEGG: ade:Adeh_1448 universal stress protein UspA YP_001379976.1 PFAM: UspA domain protein; KEGG: ade:Adeh_1445 universal stress protein UspA YP_001379977.1 KEGG: ade:Adeh_1447 ATP-dependent protease, putative YP_001379978.1 KEGG: ade:Adeh_2862 hypothetical protein YP_001379980.1 KEGG: tbd:Tbd_1939 hypothetical protein YP_001379981.1 PFAM: phage integrase family protein; KEGG: ade:Adeh_1462 phage integrase YP_001379982.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: ade:Adeh_1463 DNA-binding excisionase/Xis YP_001379984.1 KEGG: ade:Adeh_2870 hypothetical protein YP_001379985.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: ade:Adeh_2871 death-on-curing protein YP_001379986.1 PFAM: regulator of chromosome condensation RCC1; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein YP_001379987.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mes:Meso_1327 glutathione-dependent formaldehyde-activating, GFA YP_001379988.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_2884 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001379989.1 PFAM: regulatory protein ArsR; KEGG: sme:SMb20608 putative transcriptional regulator, ArsR family protein YP_001379990.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMb20607 hypothetical protein YP_001379991.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ade:Adeh_2885 glyoxalase/bleomycin resistance protein/dioxygenase YP_001379992.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: aau:AAur_4022 putative NADP oxidoreductase coenzyme F420-dependent family protein YP_001379993.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001379994.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: ade:Adeh_3133 GTPase EngC YP_001379995.1 KEGG: aor:AO090001000058 fibrillins and related proteins containing Ca2+-binding EGF-like domains Pfam: Paramecium_SA Furin-like EGF_alliinase EB YP_001379996.1 PFAM: Phosphoglycerate mutase; KEGG: ade:Adeh_2893 phosphoglycerate mutase YP_001379997.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001379998.1 KEGG: ade:Adeh_2291 hypothetical protein YP_001379999.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; 3-alpha domain protein; MOSC domain containing protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: rle:pRL110471 putative flavoprotein/ferredoxin YP_001380000.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mbu:Mbur_1659 protein of unknown function DUF6, transmembrane YP_001380002.1 PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; KEGG: ade:Adeh_2220 5'-3' exonuclease YP_001380003.1 TIGRFAM: Quinone oxidoreductase putative YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rfr:Rfer_1643 alcohol dehydrogenase, zinc-binding YP_001380004.1 KEGG: ade:Adeh_2908 hypothetical protein YP_001380005.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bja:blr4067 hypothetical protein YP_001380006.1 KEGG: ade:Adeh_2209 ABC-type nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_001380007.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2210 periplasmic sensor hybrid histidine kinase YP_001380008.1 KEGG: ade:Adeh_0129 methyltransferase type 11 YP_001380011.1 KEGG: eba:ebA6904 hypothetical protein YP_001380012.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: ade:Adeh_2229 cupin domain protein YP_001380013.1 KEGG: ade:Adeh_2936 hypothetical protein YP_001380014.1 PFAM: DNA primase small subunit; KEGG: mva:Mvan_0396 conserved hypothetical protein YP_001380015.1 PFAM: DGPFAETKE family protein; KEGG: mxa:MXAN_6510 DGPF domain protein YP_001380016.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ade:Adeh_3499 putative sigma factor YP_001380017.1 KEGG: rpb:RPB_1936 hypothetical protein YP_001380018.1 KEGG: ade:Adeh_0997 hypothetical protein YP_001380020.1 PFAM: Vitamin K epoxide reductase; KEGG: ade:Adeh_0505 vitamin K epoxide reductase YP_001380022.1 KEGG: tpa:TP0100 thioredoxin, putative YP_001380023.1 PFAM: Appr-1-p processing domain protein; KEGG: ade:Adeh_0811 Appr-1-p processing YP_001380024.1 KEGG: ade:Adeh_2056 hypothetical protein YP_001380025.1 PFAM: carbonic anhydrase; KEGG: gme:Gmet_3517 carbonic anhydrase YP_001380026.1 PFAM: OmpA/MotB domain protein; KEGG: mxa:MXAN_0855 putative chemotaxis protein MotB YP_001380027.1 PFAM: protein of unknown function UPF0089; KEGG: ade:Adeh_2067 hypothetical protein YP_001380028.1 KEGG: ade:Adeh_3903 hypothetical protein YP_001380029.1 KEGG: ade:Adeh_0194 hypothetical protein YP_001380030.1 PFAM: peptidase M20; peptidase M28; Nicastrin; SMART: PDZ/DHR/GLGF domain protein; KEGG: sus:Acid_1455 peptidase M28 YP_001380031.1 PFAM: WD40 domain protein beta Propeller; KEGG: aba:Acid345_3484 WD40-like beta propeller YP_001380032.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_0084 transcriptional regulator, LysR family YP_001380034.1 PFAM: amidohydrolase 2; peptidase M19 renal dipeptidase; KEGG: nar:Saro_3261 peptidase M19, renal dipeptidase YP_001380035.1 KEGG: mxa:MXAN_6713 hypothetical protein YP_001380036.1 KEGG: dps:DP0200 hypothetical protein YP_001380037.1 KEGG: mxa:MXAN_5315 putative lipoprotein YP_001380038.1 PFAM: metallophosphoesterase; KEGG: rso:RS02211 hypothetical protein YP_001380039.1 KEGG: mxa:MXAN_6815 hypothetical protein YP_001380040.1 KEGG: mfa:Mfla_2579 hypothetical protein YP_001380041.1 PFAM: Rhodanese domain protein; KEGG: pfo:Pfl_2063 rhodanese-like YP_001380043.1 KEGG: aba:Acid345_0435 hypothetical protein YP_001380044.1 PFAM: cytochrome c oxidase subunit III; KEGG: bpm:BURPS1710b_0944 cytochrome c oxidase subunit I YP_001380045.1 PFAM: cytochrome c oxidase subunit I; KEGG: sus:Acid_5590 cytochrome-c oxidase YP_001380046.1 PFAM: cytochrome c oxidase subunit II; KEGG: mxa:MXAN_6086 cytochrome c oxidase, subunit II YP_001380047.1 TIGRFAM: caa(3)-type oxidase, subunit IV YP_001380048.1 PFAM: cytochrome c oxidase subunit III; KEGG: sus:Acid_5592 cytochrome c oxidase, subunit III YP_001380049.1 PFAM: electron transport protein SCO1/SenC; KEGG: mxa:MXAN_7388 SCO1/SenC family protein YP_001380050.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake YP_001380051.1 KEGG: ade:Adeh_4016 hypothetical protein YP_001380052.1 PFAM: AsmA family protein; KEGG: ade:Adeh_2054 AsmA YP_001380053.1 KEGG: ade:Adeh_2947 hypothetical protein YP_001380054.1 KEGG: mla:Mlab_0898 hypothetical protein YP_001380055.1 KEGG: mxa:MXAN_0962 putative lipoprotein YP_001380056.1 KEGG: ade:Adeh_2060 hypothetical protein YP_001380057.1 PFAM: Saccharopine dehydrogenase; KEGG: gvi:glr2391 hypothetical protein YP_001380058.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: ade:Adeh_3718 methyl-accepting chemotaxis sensory transducer YP_001380059.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_0360 butyryl-CoA dehydrogenase YP_001380060.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ade:Adeh_0359 acetyl-CoA C-acyltransferase YP_001380061.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ade:Adeh_0358 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001380062.1 TIGRFAM: PAS sensor protein; propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: ade:Adeh_0357 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001380063.1 PFAM: amino acid-binding ACT domain protein; KEGG: ade:Adeh_1433 ACT domain-containing protein YP_001380064.1 KEGG: mxa:MXAN_5414 putative lipoprotein YP_001380065.1 KEGG: azo:azo3771 probable thioesterase YP_001380066.1 KEGG: cps:CPS_2431 hypothetical protein YP_001380067.1 KEGG: ade:Adeh_2959 hypothetical protein YP_001380068.1 PFAM: Endonuclease V; KEGG: sco:SCO6726 putative endonuclease YP_001380069.1 PFAM: PEBP family protein; KEGG: azo:azo2660 conserved hypothetical protein YP_001380070.1 PFAM: aldo/keto reductase; KEGG: ade:Adeh_3036 aldo/keto reductase YP_001380072.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:glr3449 hypothetical protein YP_001380073.1 KEGG: ade:Adeh_4079 hypothetical protein YP_001380074.1 PFAM: Ferritin Dps family protein; KEGG: mxa:MXAN_1562 Dps family protein YP_001380075.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: ade:Adeh_2759 excinuclease ABC, C subunit-like YP_001380076.1 PFAM: Patatin; KEGG: ade:Adeh_2396 patatin YP_001380079.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_0343 transcriptional regulator, LysR family YP_001380080.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sus:Acid_0087 electron transfer flavoprotein alpha subunit-like protein YP_001380081.1 KEGG: sus:Acid_0088 electron transfer flavoprotein beta subunit-like protein YP_001380082.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_0093 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001380083.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sus:Acid_0094 acyl-CoA dehydrogenase domain protein YP_001380084.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001380085.1 KEGG: mxa:MXAN_7340 hypothetical protein YP_001380086.1 KEGG: ade:Adeh_0067 hypothetical protein YP_001380087.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; KEGG: ade:Adeh_2962 hypothetical protein YP_001380088.1 TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pol:Bpro_3898 multi-sensor signal transduction histidine kinase YP_001380089.1 KEGG: mlo:mlr1600 hypothetical protein YP_001380090.1 PFAM: type IV pilus assembly PilZ YP_001380091.1 PFAM: amino acid-binding ACT domain protein; 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ade:Adeh_2960 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001380092.1 KEGG: ade:Adeh_2965 hypothetical protein YP_001380093.1 PFAM: amino acid permease-associated region; KEGG: mxa:MXAN_1558 amino acid permease YP_001380094.1 PFAM: putative RNA methylase; KEGG: gvi:gll1651 hypothetical protein YP_001380095.1 PFAM: carboxyl transferase; biotin/lipoyl attachment domain-containing protein; KEGG: ade:Adeh_2968 acetyl/propionyl-CoA carboxylase alpha subunit YP_001380096.1 PFAM: PfkB domain protein; KEGG: ade:Adeh_0498 carbohydrate kinase, PfkB YP_001380097.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_3044 DEAD/DEAH box helicase-like YP_001380098.1 KEGG: ade:Adeh_2966 hypothetical protein YP_001380099.1 KEGG: ade:Adeh_2967 putative lipoprotein YP_001380100.1 PFAM: GAF domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ade:Adeh_3048 putative GAF sensor protein YP_001380101.1 KEGG: ade:Adeh_3047 hypothetical protein YP_001380102.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_4096 serine/threonine protein kinase YP_001380103.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ade:Adeh_2865 hypothetical protein YP_001380104.1 PFAM: FAD linked oxidase domain protein; KEGG: ade:Adeh_2866 FAD linked oxidase-like YP_001380105.1 PFAM: FAD linked oxidase domain protein; KEGG: ade:Adeh_2867 D-lactate dehydrogenase (cytochrome) YP_001380106.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ade:Adeh_2890 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001380107.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ade:Adeh_2891 tripartite ATP-independent periplasmic transporter, DctQ component YP_001380108.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ade:Adeh_2892 TRAP dicarboxylate transporter-DctP subunit YP_001380109.1 KEGG: mmu:239611 mucin 19 YP_001380110.1 KEGG: bpm:BURPS1710b_3413 hypothetical protein YP_001380111.1 KEGG: ade:Adeh_2978 hypothetical protein YP_001380112.1 KEGG: aci:ACIAD3581 hypothetical protein YP_001380113.1 KEGG: ade:Adeh_2942 periplasmic sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001380114.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_001380115.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_001380116.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: ade:Adeh_3909 tautomerase YP_001380117.1 KEGG: art:Arth_3964 hypothetical protein YP_001380118.1 PFAM: ATP-binding region ATPase domain protein; KEGG: ppd:Ppro_3006 histidine kinase YP_001380120.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_2980 tetratricopeptide repeat protein YP_001380121.1 PFAM: protein of unknown function DUF399; KEGG: ade:Adeh_2981 protein of unknown function DUF399 YP_001380123.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_2895 cobalamin vitamin B12-binding / radical SAM protein YP_001380124.1 KEGG: noc:Noc_0949 hypothetical protein YP_001380125.1 PFAM: GTP-binding protein HSR1-related; KEGG: noc:Noc_0950 GTP-binding protein, HSR1-related YP_001380126.1 KEGG: ade:Adeh_3511 hypothetical protein YP_001380127.1 similar to YegS from E. coli YP_001380128.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_2982 hypothetical protein YP_001380129.1 KEGG: ade:Adeh_2983 hypothetical protein YP_001380130.1 TIGRFAM: oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: mxa:MXAN_2405 oligopeptide transporter, OPT family YP_001380131.1 PFAM: PfkB domain protein; KEGG: ade:Adeh_2985 carbohydrate kinase, PfkB YP_001380132.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ade:Adeh_2987 tRNA/rRNA methyltransferase, SpoU YP_001380133.1 PFAM: CBS domain containing protein; KEGG: ade:Adeh_1449 putative signal transduction protein with CBS domains YP_001380134.1 PFAM: protein of unknown function UPF0126; KEGG: ade:Adeh_2988 protein of unknown function UPF0126 YP_001380135.1 KEGG: ade:Adeh_2989 hypothetical protein YP_001380136.1 PFAM: GtrA family protein; KEGG: ade:Adeh_2990 GtrA-like protein YP_001380137.1 KEGG: ade:Adeh_4142 response regulator receiver domain protein (CheY-like) YP_001380138.1 KEGG: mxa:MXAN_6445 hypothetical protein YP_001380139.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_001380140.1 PFAM: aminotransferase class V; KEGG: ade:Adeh_2994 aminotransferase, class V YP_001380141.1 KEGG: ade:Adeh_2996 hypothetical protein YP_001380142.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ade:Adeh_2658 secretion protein HlyD YP_001380143.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_2657 ABC transporter, inner membrane subunit YP_001380144.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2656 ABC transporter, ATPase subunit YP_001380145.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: ade:Adeh_2997 transcriptional regulator, XRE family YP_001380146.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle YP_001380147.1 KEGG: ade:Adeh_2999 hypothetical protein YP_001380148.1 KEGG: ade:Adeh_3000 hypothetical protein YP_001380149.1 amylomaltase; acts to release glucose from maltodextrins YP_001380150.1 KEGG: ade:Adeh_3045 hypothetical protein YP_001380151.1 TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ade:Adeh_3002 trehalose synthase-like YP_001380152.1 KEGG: ade:Adeh_3003 hypothetical protein YP_001380153.1 PFAM: CBS domain containing protein; KEGG: ade:Adeh_3004 putative signal-transduction protein with CBS domains YP_001380154.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: ade:Adeh_3005 alanine dehydrogenase/PNT-like YP_001380155.1 KEGG: ade:Adeh_3006 pyridine nucleotide transhydrogenase alpha subunit-like YP_001380156.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: ade:Adeh_3007 NAD(P) transhydrogenase, beta subunit YP_001380157.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ade:Adeh_1162 zinc-binding alcohol dehydrogenase YP_001380158.1 PFAM: protein of unknown function DUF1486; KEGG: sus:Acid_4282 protein of unknown function DUF1486 YP_001380159.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2240 periplasmic sensor signal transduction histidine kinase YP_001380160.1 PFAM: peptidase S41; KEGG: saz:Sama_1752 conserved hypothetical protein YP_001380161.1 KEGG: sfr:Sfri_0593 hypothetical protein YP_001380162.1 KEGG: ade:Adeh_3528 hypothetical protein YP_001380163.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_1572 transcriptional regulator, TetR family YP_001380164.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mxa:MXAN_2968 efflux transporter, RND family, MFP subunit YP_001380165.1 PFAM: acriflavin resistance protein; KEGG: ade:Adeh_1476 acriflavin resistance protein YP_001380166.1 KEGG: ade:Adeh_3008 hypothetical protein YP_001380167.1 activates fatty acids by binding to coenzyme A YP_001380168.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ade:Adeh_3010 zinc-binding alcohol dehydrogenase YP_001380169.1 KEGG: ade:Adeh_3011 hypothetical protein YP_001380170.1 KEGG: ade:Adeh_3011 hypothetical protein YP_001380171.1 KEGG: gvi:glr4334 unknown protein YP_001380172.1 SMART: HNH nuclease; KEGG: ade:Adeh_2806 HNH endonuclease YP_001380173.1 KEGG: gsu:GSU2516 rhodanese-like domain protein YP_001380174.1 catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_001380175.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: ade:Adeh_3013 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_001380176.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_001380177.1 KEGG: ptr:455427 similar to methyl-CpG binding protein MBD2 YP_001380178.1 KEGG: ade:Adeh_2946 hypothetical protein YP_001380179.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_3016 hemerythrin-like, metal-binding protein YP_001380180.1 PFAM: FAD linked oxidase domain protein; KEGG: ade:Adeh_3018 FAD linked oxidase-like YP_001380181.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_001380182.1 PFAM: GAF domain protein; PAS fold-4 domain protein; KEGG: ade:Adeh_3023 putative GAF sensor protein YP_001380183.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_3024 acyl-CoA dehydrogenase, type 1 YP_001380184.1 PFAM: aldehyde dehydrogenase; KEGG: ade:Adeh_3025 aldehyde dehydrogenase YP_001380185.1 PFAM: Abortive infection protein; KEGG: ade:Adeh_3026 abortive infection protein YP_001380186.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_6953 sensory box histidine kinase YP_001380187.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: ade:Adeh_3027 NAD-dependent epimerase/dehydratase YP_001380188.1 PFAM: DNA photolyase FAD-binding; KEGG: ade:Adeh_3028 FAD-binding DNA photolyase YP_001380189.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: ade:Adeh_3029 protein of unknown function DUF523 YP_001380190.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: ade:Adeh_3031 ribonuclease BN, putative YP_001380191.1 PFAM: protein of unknown function DUF1206; KEGG: rxy:Rxyl_0683 protein of unknown function DUF1206 YP_001380192.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase family 20; trehalose-phosphatase; KEGG: ade:Adeh_0450 trehalose-phosphatase YP_001380193.1 KEGG: ade:Adeh_3032 DnaK-related protein YP_001380194.1 KEGG: ade:Adeh_3033 putative heat-shock chaperone protein YP_001380195.1 KEGG: ade:Adeh_3034 hypothetical protein YP_001380197.1 PFAM: protein of unknown function DUF72; KEGG: ade:Adeh_3035 protein of unknown function DUF72 YP_001380198.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: aba:Acid345_3014 multi-sensor hybrid histidine kinase YP_001380199.1 PFAM: aldo/keto reductase; KEGG: ade:Adeh_3040 aldo/keto reductase YP_001380200.1 PFAM: ABC transporter related; LysR substrate-binding; SMART: AAA ATPase; KEGG: ade:Adeh_0455 ABC phosphonate transporter, ATPase subunit/LysR type substrate-binding domain YP_001380201.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_0456 ABC phosphonate transporter, fused inner membrane subunits YP_001380202.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ade:Adeh_0457 ABC phosphonate-binding periplasmic protein YP_001380203.1 KEGG: ade:Adeh_3987 HNH endonuclease YP_001380204.1 KEGG: rxy:Rxyl_0343 methyltransferase type 12 YP_001380205.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mca:MCA0204 nitrogenase cofactor biosynthesis protein NifB YP_001380206.1 TIGRFAM: Ferredoxin III 4[4Fe-4S] nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gme:Gmet_0672 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001380207.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: gme:Gmet_0671 dinitrogenase iron-molybdenum cofactor biosynthesis YP_001380208.1 in some organisms the NifE and NifN proteins are encoded separately; functions in assembly of FeMo cofactor; functions in assembly of nitrogenase MoFe YP_001380209.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; KEGG: gsu:GSU2819 nitrogenase molybdenum-iron protein, beta subunit YP_001380210.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; KEGG: gme:Gmet_0663 nitrogenase molybdenum-iron protein alpha chain YP_001380211.1 TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; KEGG: gsu:GSU2821 nitrogenase iron protein YP_001380212.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY4264 hypothetical protein YP_001380213.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_B1445 transcriptional regulator, NifA, fis family YP_001380214.1 PFAM: Dinitrogenase reductase ADP-ribosyltransferase; KEGG: gme:Gmet_0674 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_001380215.1 TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1; KEGG: gme:Gmet_0680 ADP-ribosylation/crystallin J1 YP_001380216.1 PFAM: peptidase M4 thermolysin; protease-associated PA domain protein; Na-Ca exchanger/integrin-beta4; Propeptide peptidase M4 and M36; Peptidase M4 thermolysin; KEGG: ade:Adeh_3188 protease-associated PA YP_001380218.1 PFAM: sodium:neurotransmitter symporter; KEGG: syd:Syncc9605_1969 putative sodium-dependent transporter, NSS family YP_001380219.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: dde:Dde_1846 amino acid carrier protein YP_001380220.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_0859 HNH nuclease YP_001380221.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ade:Adeh_2769 glycosyl transferase, WecB/TagA/CpsF family YP_001380222.1 KEGG: ade:Adeh_2086 putative formate dehydrogenase formation protein YP_001380223.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Polysulphide reductase NrfD; KEGG: ade:Adeh_2087 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001380224.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ade:Adeh_2088 formate dehydrogenase YP_001380225.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: ade:Adeh_2089 molybdopterin oxidoreductase Fe4s4 region YP_001380226.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_3606 sigma54 specific transcriptional regulator with GAF sensor, fis family YP_001380227.1 PFAM: histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: pca:Pcar_1077 sensory box/GGDEF family protein YP_001380228.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: ade:Adeh_0826 formate dehydrogenase family accessory protein FdhD YP_001380229.1 PFAM: UspA domain protein; KEGG: sru:SRU_1736 universal stress protein YP_001380230.1 TIGRFAM: cytochrome C family protein; KEGG: ade:Adeh_3077 multihaem cytochrome YP_001380231.1 PFAM: aldo/keto reductase; KEGG: sus:Acid_5876 aldo/keto reductase YP_001380232.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: ade:Adeh_2068 hydro-lyase, Fe-S type, tartrate/fumarate subfamily YP_001380233.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_0383 hemerythrin-like, metal-binding protein YP_001380234.1 KEGG: rsp:RSP_2382 hypothetical protein YP_001380235.1 PFAM: protein of unknown function DUF1469; KEGG: tfu:Tfu_2992 hypothetical protein YP_001380237.1 PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mxa:MXAN_0597 glycine betaine/L-proline ABC transporter, permease and substrate-binding protein YP_001380238.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sru:SRU_2473 ABC transporter, ATP-binding protein, putative YP_001380239.1 KEGG: ade:Adeh_0987 hypothetical protein YP_001380240.1 KEGG: ade:Adeh_3043 hypothetical protein YP_001380241.1 TIGRFAM: conserved hypothetical integral membrane protein; KEGG: bld:BLi04068 YwaF YP_001380242.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: ade:Adeh_1153 channel protein, hemolysin III family YP_001380243.1 KEGG: ade:Adeh_2799 hypothetical protein YP_001380244.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ade:Adeh_2147 YbaK/prolyl-tRNA synthetase associated region YP_001380245.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pto:PTO0757 zinc-binding dehydrogenase YP_001380246.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: ade:Adeh_2110 transcriptional regulator, TraR/DksA family YP_001380247.1 KEGG: mxa:MXAN_7023 putative lipoprotein YP_001380248.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bpm:BURPS1710b_A0709 sensory box sensor histidine kinase YP_001380249.1 PFAM: response regulator receiver; KEGG: ppu:PP_2942 response regulator YP_001380250.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; trehalose synthase-fused possible maltokinase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; KEGG: sfu:Sfum_3451 1,4-alpha-glucan branching enzyme YP_001380251.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: noc:Noc_0829 alpha amylase, catalytic region YP_001380252.1 KEGG: mxa:MXAN_0529 hypothetical protein YP_001380253.1 KEGG: mca:MCA1217 metalloprotease, putative YP_001380254.1 KEGG: xfa:XF1025 hypothetical protein YP_001380255.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001380256.1 PFAM: FAD dependent oxidoreductase; KEGG: ade:Adeh_3081 FAD dependent oxidoreductase YP_001380257.1 KEGG: mxa:MXAN_0859 putative lipoprotein YP_001380258.1 KEGG: gvi:gll0371 putative transposase YP_001380259.1 KEGG: pmi:PMT9312_1134 hypothetical protein YP_001380260.1 PFAM: heat shock protein Hsp20; KEGG: sus:Acid_7099 heat shock protein HSP20 YP_001380261.1 KEGG: ade:Adeh_0489 hypothetical protein YP_001380262.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: reh:H16_B0573 hypothetical membrane protein YP_001380263.1 KEGG: ade:Adeh_0499 hypothetical protein YP_001380264.1 KEGG: ade:Adeh_3089 hypothetical protein YP_001380265.1 PFAM: Polysulphide reductase NrfD; KEGG: ade:Adeh_3088 polysulphide reductase, NrfD YP_001380266.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_3087 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001380267.1 KEGG: ade:Adeh_3086 cytochrome c family protein YP_001380268.1 KEGG: ade:Adeh_2802 hypothetical protein YP_001380269.1 KEGG: mca:MCA1015 hypothetical protein YP_001380270.1 KEGG: pca:Pcar_2081 hypothetical protein YP_001380271.1 KEGG: mmr:Mmar10_0677 exporter of the RND superfamily YP_001380272.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ade:Adeh_0224 endonuclease/exonuclease/phosphatase YP_001380273.1 PFAM: UspA domain protein; KEGG: ade:Adeh_1445 universal stress protein UspA YP_001380274.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive YP_001380275.1 PFAM: tRNA synthetase class I (M); KEGG: rle:RL0998 putative methionyl-tRNA synthetase YP_001380276.1 PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding; SAF domain protein; KEGG: mpt:Mpe_A3249 hypothetical protein YP_001380277.1 KEGG: ade:Adeh_3030 hypothetical protein YP_001380278.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: ade:Adeh_0310 4-oxalocrotonate tautomerase family enzyme YP_001380279.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: ade:Adeh_2897 acetate kinase YP_001380280.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate YP_001380281.1 KEGG: bur:Bcep18194_B2571 amino acid transporter-like YP_001380283.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0892 osmosensitive K+ channel signal transduction histidine kinase YP_001380284.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ade:Adeh_0891 two component transcriptional regulator, winged helix family YP_001380285.1 PFAM: protein of unknown function RIO1; KEGG: ade:Adeh_2195 protein of unknown function RIO1 YP_001380286.1 KEGG: ade:Adeh_2196 translation initiation factor 2 YP_001380287.1 KEGG: ade:Adeh_0244 LigA YP_001380288.1 PFAM: multicopper oxidase type 2; KEGG: ade:Adeh_0912 fibronectin, type III/multicopper oxidase, type 2 YP_001380290.1 KEGG: gme:Gmet_0913 hypothetical protein YP_001380292.1 KEGG: sus:Acid_0990 hypothetical protein YP_001380293.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bxe:Bxe_B2853 hypothetical protein YP_001380294.1 PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mxa:MXAN_3202 serine/threonine protein kinase YP_001380295.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_3336 hypothetical protein YP_001380296.1 PFAM: histidine kinase HAMP region domain protein; KEGG: aba:Acid345_4236 sensor protein YP_001380297.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ade:Adeh_2121 hypothetical protein YP_001380301.1 PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: bxe:Bxe_C1144 ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily YP_001380302.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: mxa:MXAN_2853 putative lantibiotic ABC transporter, permease/ATP-binding protein YP_001380303.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_2853 putative lantibiotic ABC transporter, permease/ATP-binding protein YP_001380304.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_4153 outer membrane efflux protein YP_001380305.1 PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_2796 serine/threonine protein kinase YP_001380306.1 PFAM: DSBA oxidoreductase; Vitamin K epoxide reductase; KEGG: ade:Adeh_0505 vitamin K epoxide reductase YP_001380307.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sit:TM1040_0066 anti-sigma-factor antagonist YP_001380308.1 PFAM: glycosyl transferase family 2; KEGG: mca:MCA0708 glycosyl transferase, group 2 family protein YP_001380309.1 KEGG: mca:MCA0709 hypothetical protein YP_001380310.1 KEGG: ana:alr3756 unknown protein YP_001380311.1 PFAM: glycoside hydrolase family 16; KEGG: ade:Adeh_2950 hypothetical protein YP_001380312.1 KEGG: ade:Adeh_3488 transcriptional regulator, TraR/DksA family YP_001380313.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_001380314.1 PFAM: CBS domain containing protein; peptidase M50; KEGG: mxa:MXAN_1115 SREBP protease/CBS domain YP_001380315.1 PFAM: Pirin domain protein; KEGG: ade:Adeh_2205 pirin-like YP_001380317.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: ade:Adeh_3694 exonuclease YP_001380318.1 KEGG: plt:Plut_0487 hypothetical protein YP_001380319.1 PFAM: Na+ symporter; KEGG: mpt:Mpe_A1525 putative membrane transport protein YP_001380322.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: ade:Adeh_3695 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001380323.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: ade:Adeh_3695 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001380324.1 PFAM: transport-associated; KEGG: reh:H16_B2340 hypothetical protein YP_001380325.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dvu:DVU2590 sensory box protein YP_001380326.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: ade:Adeh_3128 alkylhydroperoxidase AhpD core YP_001380329.1 KEGG: ade:Adeh_3782 hypothetical protein YP_001380331.1 PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gsu:GSU3320 ribosomal protein L11 methyltransferase, putative YP_001380332.1 KEGG: ade:Adeh_0897 hypothetical protein YP_001380333.1 KEGG: ppd:Ppro_0187 hypothetical protein YP_001380334.1 PFAM: Rubrerythrin; KEGG: ade:Adeh_2193 rubrerythrin YP_001380335.1 PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: mxa:MXAN_3440 peptidase, M13 (neprilysin) family YP_001380336.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rso:RSc0220 hypothetical protein YP_001380337.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro01052 possible cell wall protein YP_001380338.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ade:Adeh_3179 cation transport ATPase, E1-E2 type YP_001380339.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_3566 L-aspartate oxidase YP_001380340.1 PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_2796 serine/threonine protein kinase YP_001380341.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: mbu:Mbur_2108 multisensor signal transduction histidine kinase YP_001380342.1 PFAM: ThiJ/PfpI domain protein; Catalase domain protein; KEGG: nmu:Nmul_A1515 catalase YP_001380343.1 KEGG: ade:Adeh_2271 hypothetical protein YP_001380344.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: mca:MCA2420 acetyltransferase, GNAT family YP_001380345.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ade:Adeh_0049 electron transfer flavoprotein alpha and beta subunits YP_001380346.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ade:Adeh_0048 electron transfer flavoprotein beta-subunit YP_001380347.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A0902 transcriptional regulator, AraC family YP_001380348.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: eba:ebA6506 acyl-CoA dehydrogenase YP_001380349.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: ArgK protein; methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; KEGG: mpt:Mpe_A0903 methylmalonyl-CoA mutase YP_001380350.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eba:ebA1206 putative acetyl-coenzyme A synthetase YP_001380351.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aeh:Mlg_1636 methyltransferase type 11 YP_001380352.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively YP_001380353.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_1005 ABC transporter, ATPase subunit YP_001380354.1 PFAM: inner-membrane translocator; KEGG: ade:Adeh_1004 ABC transporter, inner membrane subunit YP_001380355.1 PFAM: inner-membrane translocator; KEGG: ade:Adeh_1003 ABC transporter, inner membrane subunit YP_001380356.1 PFAM: basic membrane lipoprotein; KEGG: ade:Adeh_1002 basic membrane lipoprotein YP_001380358.1 PFAM: amine oxidase; KEGG: sus:Acid_7729 amine oxidase YP_001380359.1 PFAM: cyclic nucleotide-binding; Patatin; KEGG: nha:Nham_1374 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001380361.1 PFAM: protein of unknown function UPF0118; KEGG: ade:Adeh_0747 protein of unknown function UPF0118 YP_001380362.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_2895 cobalamin vitamin B12-binding / radical SAM protein YP_001380365.1 KEGG: ade:Adeh_4342 hypothetical protein YP_001380366.1 PFAM: Lipocalin family protein; KEGG: gsu:GSU2326 outer membrane lipoprotein YP_001380367.1 PFAM: fatty acid desaturase; KEGG: ade:Adeh_1021 linoleoyl-CoA desaturase YP_001380368.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2444 histidine kinase YP_001380369.1 KEGG: sma:SAV1685 hypothetical protein YP_001380370.1 PFAM: PGAP1 family protein; KEGG: ade:Adeh_0964 PGAP1-like YP_001380371.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; SMART: AAA ATPase; KEGG: mxa:MXAN_5879 sigma-54 dependent transcriptional regulator, fis family YP_001380372.1 PFAM: YceI family protein; KEGG: ade:Adeh_0932 YceI YP_001380373.1 PFAM: Hemerythrin HHE cation binding domain protein YP_001380374.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ade:Adeh_0933 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_001380375.1 KEGG: mes:Meso_0572 twin-arginine translocation pathway signal YP_001380376.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ade:Adeh_3143 cystathionine gamma-synthase YP_001380377.1 PFAM: conserved hypothetical protein 698; KEGG: chu:CHU_0563 probable membrane protein YP_001380378.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001380379.1 PFAM: sodium/hydrogen exchanger; KEGG: ade:Adeh_3170 sodium/hydrogen exchanger YP_001380380.1 PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_0345 hypothetical protein YP_001380381.1 KEGG: bja:blr6642 hypothetical protein YP_001380383.1 PFAM: cyclic nucleotide-binding; KEGG: bja:blr1247 hypothetical protein YP_001380385.1 PFAM: aldo/keto reductase; KEGG: rfr:Rfer_2445 aldo/keto reductase YP_001380386.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bte:BTH_I0152 alcohol dehydrogenase, zinc-containing YP_001380387.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ade:Adeh_3166 zinc-binding alcohol dehydrogenase YP_001380388.1 KEGG: cfa:487667 similar to Insulin gene enhancer protein ISL-2 (Islet-2) YP_001380389.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_3171 transcriptional regulator, LysR family YP_001380390.1 KEGG: ade:Adeh_0874 hypothetical protein YP_001380391.1 PFAM: Nucleotidyl transferase; KEGG: ade:Adeh_0875 nucleotidyl transferase YP_001380392.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mxa:MXAN_1048 UDP-glucose 6-dehydrogenase YP_001380393.1 KEGG: ade:Adeh_1058 hypothetical protein YP_001380394.1 KEGG: ade:Adeh_1059 hypothetical protein YP_001380395.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: ade:Adeh_1060 NAD-dependent epimerase/dehydratase YP_001380396.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: ade:Adeh_1061 NAD-dependent epimerase/dehydratase YP_001380397.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ade:Adeh_1062 zinc-binding alcohol dehydrogenase YP_001380398.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ade:Adeh_1063 oxidoreductase-like protein YP_001380399.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_1064 glycosyl transferase, group 1 YP_001380400.1 KEGG: ade:Adeh_1065 hypothetical protein YP_001380401.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0876 methyltransferase type 11 YP_001380402.1 KEGG: ade:Adeh_0877 hypothetical protein YP_001380403.1 KEGG: ade:Adeh_0878 hypothetical protein YP_001380404.1 PFAM: glycoside hydrolase family 5; KEGG: mxa:MXAN_4073 putative glycosyl hydrolase YP_001380405.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_1067 ABC transporter, fused ATPase and inner membrane subunits YP_001380406.1 PFAM: protein of unknown function DUF1003; KEGG: mes:Meso_1875 protein of unknown function DUF1003 YP_001380407.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_3060 two-component system regulatory protein YP_001380408.1 PFAM: KaiA binding; SMART: AAA ATPase; KEGG: aba:Acid345_0067 putative circadian clock protein, KaiC YP_001380410.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gme:Gmet_1684 transcriptional regulator, LysR family YP_001380411.1 KEGG: mac:MA0038 hypothetical protein YP_001380412.1 PFAM: Radical SAM domain protein; KEGG: sus:Acid_4849 radical SAM domain protein YP_001380413.1 PFAM: sulfatase; KEGG: ava:Ava_0111 sulfatase YP_001380414.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: dvl:Dvul_2908 sulfate transporter YP_001380415.1 KEGG: sit:TM1040_1830 hypothetical protein YP_001380416.1 PFAM: Bile acid:sodium symporter; KEGG: tfu:Tfu_1354 transmembrane transport protein YP_001380418.1 KEGG: mma:MM2866 hypothetical protein YP_001380419.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_2923 putative transcriptional regulator, TetR family YP_001380420.1 PFAM: Amidase; KEGG: ade:Adeh_2922 amidase YP_001380421.1 KEGG: mxa:MXAN_3919 regulator of nucleoside diphosphate kinase YP_001380422.1 KEGG: ade:Adeh_1753 GCN5-related N-acetyltransferase YP_001380423.1 TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: bja:blr6758 glucose-6-phosphate isomerase / transaldolase YP_001380424.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sus:Acid_0850 DNA-directed DNA polymerase YP_001380425.1 TIGRFAM: DNA polymerase LigD polymerase domain; PFAM: DNA primase small subunit; KEGG: sco:SCO6498 hypothetical protein YP_001380426.1 KEGG: ade:Adeh_0244 LigA YP_001380428.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_3912 bifunctional deaminase-reductase-like YP_001380429.1 PFAM: OsmC family protein; KEGG: mlo:mll4282 organic hydroperoxide resistance protein YP_001380430.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: ade:Adeh_3194 3-demethylubiquinone-9 3-methyltransferase YP_001380431.1 PFAM: regulatory protein TetR; KEGG: rpa:RPA3021 probable transcriptional regulator TetR family YP_001380432.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ava:Ava_3459 short-chain dehydrogenase/reductase SDR YP_001380433.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_5189 glyoxalase/bleomycin resistance protein/dioxygenase YP_001380434.1 PFAM: protein of unknown function DUF1568; KEGG: ade:Adeh_3990 hypothetical protein YP_001380435.1 PFAM: Rhodanese domain protein; regulatory protein ArsR; KEGG: rxy:Rxyl_2941 transcriptional regulator, ArsR family YP_001380436.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mta:Moth_1176 UbiE/COQ5 methyltransferase YP_001380437.1 KEGG: ppd:Ppro_1930 SAM-dependent methyltransferases YP_001380438.1 PFAM: DsrE family protein; KEGG: aeh:Mlg_0625 DsrE family protein YP_001380440.1 KEGG: sil:SPO1611 hypothetical protein YP_001380441.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mkm:Mkms_3401 methyltransferase type 12 YP_001380442.1 PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: xcb:XC_0614 hypothetical protein YP_001380443.1 KEGG: sma:SAV6898 hypothetical protein YP_001380444.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-D-glucosidase YP_001380446.1 PFAM: protein of unknown function DUF1486; KEGG: mac:MA1575 hypothetical protein YP_001380447.1 PFAM: SEC-C motif domain protein; KEGG: sus:Acid_5736 sec-C motif domain protein YP_001380449.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: sfu:Sfum_2320 NAD(P)H dehydrogenase (quinone) YP_001380450.1 KEGG: ade:Adeh_3872 hypothetical protein YP_001380451.1 PFAM: response regulator receiver; KEGG: ade:Adeh_3844 response regulator receiver domain protein (CheY-like) YP_001380452.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_1754 oxidoreductase, short-chain dehydrogenase/reductase family YP_001380455.1 KEGG: mxa:MXAN_4918 transposase, IS630 family YP_001380456.1 KEGG: nha:Nham_3971 hypothetical protein YP_001380457.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr3375 transcriptional regulator YP_001380458.1 KEGG: mlo:mlr3377 hypothetical protein YP_001380459.1 KEGG: mlo:mlr3377 hypothetical protein YP_001380460.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: maq:Maqu_3849 glyoxalase/bleomycin resistance protein/dioxygenase YP_001380461.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: mxa:MXAN_6286 transposition helper protein, IS21 family YP_001380463.1 PFAM: beta-lactamase; KEGG: sit:TM1040_2807 6-aminohexanoate-dimer hydrolase YP_001380466.1 KEGG: ade:Adeh_3198 hypothetical protein YP_001380468.1 KEGG: ade:Adeh_3245 hypothetical protein YP_001380469.1 KEGG: ade:Adeh_3246 hypothetical protein YP_001380470.1 KEGG: ade:Adeh_3247 hypothetical protein YP_001380471.1 KEGG: fra:Francci3_4013 transposase, IS4 YP_001380472.1 KEGG: rxy:Rxyl_2857 hypothetical protein YP_001380473.1 PFAM: Domain of unknown function DUF1814; KEGG: sat:SYN_01879 hypothetical cytosolic protein YP_001380474.1 KEGG: plt:Plut_1882 hypothetical protein YP_001380475.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; zinc finger SWIM domain protein; SMART: DEAD-like helicases; KEGG: rba:RB5259 helicase, SNF2 family YP_001380476.1 PFAM: phage integrase family protein; KEGG: nmu:Nmul_A0064 phage integrase YP_001380477.1 PFAM: nitroreductase; KEGG: mxa:MXAN_7067 nitroreductase family protein YP_001380478.1 KEGG: eba:ebA2870 hypothetical protein YP_001380479.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B0822 HAD-superfamily hydrolase, subfamily IA, variant3 YP_001380481.1 KEGG: mxa:MXAN_0539 hypothetical protein YP_001380482.1 PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV7243 thioredoxin reductase YP_001380483.1 PFAM: aldo/keto reductase; KEGG: sth:STH658 oxidoreductase YP_001380484.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ade:Adeh_1056 glycogen debranching enzyme GlgX YP_001380485.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mxa:MXAN_0110 cardiolipin synthase YP_001380486.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_001380487.1 KEGG: pna:Pnap_1310 hypothetical protein YP_001380488.1 PFAM: protein of unknown function DUF114; KEGG: tth:TTC1111 periplasmic serine protease YP_001380489.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1170 ATPase AAA-2 YP_001380490.1 KEGG: net:Neut_2430 hypothetical protein YP_001380491.1 PFAM: heat shock protein Hsp20; KEGG: rxy:Rxyl_0675 heat shock protein HSP20 YP_001380493.1 PFAM: conserved hypothetical protein 730; KEGG: sus:Acid_3588 conserved hypothetical protein 730 YP_001380494.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001380495.1 PFAM: UspA domain protein; KEGG: ade:Adeh_1445 universal stress protein UspA YP_001380496.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ava:Ava_C0139 transport-associated YP_001380497.1 KEGG: ttj:TTHA1432 hypothetical protein YP_001380498.1 KEGG: aau:AAur_4069 trehalose synthase YP_001380499.1 PFAM: Carbohydrate binding family 6; KEGG: bth:BT_3087 cycloisomaltooligosaccharide glucanotransferase YP_001380500.1 PFAM: Carbohydrate binding family 6; KEGG: ehi:120.t00008 conserved hypothetical protein YP_001380503.1 PFAM: ThiJ/PfpI domain protein; KEGG: rxy:Rxyl_2045 peptidase C56, PfpI YP_001380504.1 PFAM: heat shock protein Hsp20; KEGG: rxy:Rxyl_0675 heat shock protein HSP20 YP_001380505.1 PFAM: PRC-barrel domain protein; KEGG: reu:Reut_C5914 PRC-barrel YP_001380507.1 PFAM: transport-associated; KEGG: reu:Reut_B4381 transport-associated YP_001380509.1 PFAM: Ig domain protein group 2 domain protein; KEGG: lil:LA3075 surface protein Lk90-like protein YP_001380510.1 KEGG: mxa:MXAN_0775 hypothetical protein YP_001380511.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ade:Adeh_3287 peptidase M24 YP_001380512.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: sil:SPO2642 YeeE/YedE family protein YP_001380513.1 KEGG: sth:STH2297 hypothetical protein YP_001380514.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: ade:Adeh_3288 peptidase M61 YP_001380515.1 PFAM: transcriptional activator domain; SMART: AAA ATPase; KEGG: ade:Adeh_3289 transcriptional regulator, SARP family YP_001380516.1 KEGG: ade:Adeh_3294 Zn-dependent alcohol dehydrogenase YP_001380517.1 KEGG: mxa:MXAN_3888 hypothetical protein YP_001380518.1 PFAM: protein of unknown function RIO1; protein kinase; UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_3699 serine/threonine protein kinase YP_001380519.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_3700 metallophosphoesterase YP_001380520.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ade:Adeh_3698 major facilitator superfamily transporter YP_001380522.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: eba:ebA3729 putative two-component sensor protein YP_001380523.1 PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ajs:Ajs_0433 two component transcriptional regulator, LuxR family YP_001380524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH02037 probable short-chain dehydrogenase protein YP_001380525.1 PFAM: protein of unknown function DUF336; KEGG: ret:RHE_CH02038 hypothetical protein YP_001380526.1 KEGG: ava:Ava_C0113 ketosteroid isomerase-related protein-like YP_001380527.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: sus:Acid_2052 transcriptional regulator, NifA subfamily, fis family YP_001380528.1 PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rpb:RPB_4356 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001380529.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: xcb:XC_1940 transcriptional regulator YP_001380530.1 PFAM: alpha/beta hydrolase fold; KEGG: mac:MA0993 chloride peroxidase YP_001380531.1 PFAM: Disintegrin; KEGG: aor:AO090003001107 meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family Pfam: Pep_M12B_propep Reprolysin Disintegrin Keratin_B2 IGFBP ADAM_CR Ldl_recept_a PROSITE: CYS_RICH PRO_RICH DISINTEGRIN_2 ADAM_MEPRO YP_001380532.1 PFAM: protein of unknown function DUF815; KEGG: ade:Adeh_2931 protein of unknown function DUF815 YP_001380533.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0967 response regulator receiver domain protein (CheY-like) YP_001380534.1 KEGG: mxa:MXAN_6821 hypothetical protein YP_001380535.1 KEGG: ade:Adeh_3306 hypothetical protein YP_001380536.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: ade:Adeh_3307 signal recognition particle protein YP_001380538.1 KEGG: ade:Adeh_3309 hypothetical protein YP_001380539.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: ade:Adeh_3310 zinc finger/thioredoxin putative YP_001380540.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3311 tetratricopeptide repeat protein YP_001380541.1 KEGG: mxa:MXAN_2580 putative lipoprotein YP_001380542.1 KEGG: ade:Adeh_3312 hypothetical protein YP_001380543.1 PFAM: thymidylate kinase; KEGG: ade:Adeh_3313 hypothetical protein YP_001380544.1 KEGG: ade:Adeh_3314 hypothetical protein YP_001380545.1 KEGG: ade:Adeh_3315 hypothetical protein YP_001380546.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_3316 metallophosphoesterase YP_001380547.1 PFAM: Spore coat protein CotH; KEGG: ade:Adeh_3317 spore coat assembly protein-like YP_001380548.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_2061 ABC transporter, ATPase subunit YP_001380549.1 TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase family 2; KEGG: ade:Adeh_1180 methylthioadenosine phosphorylase YP_001380550.1 KEGG: ade:Adeh_3318 hypothetical protein YP_001380551.1 PFAM: Forkhead-associated protein; KEGG: ade:Adeh_3319 FHA domain containing protein YP_001380552.1 KEGG: ade:Adeh_3320 hypothetical protein YP_001380553.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3321 tetratricopeptide repeat protein YP_001380554.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3322 tetratricopeptide repeat protein YP_001380555.1 KEGG: ade:Adeh_3323 hypothetical protein YP_001380556.1 KEGG: ade:Adeh_3324 hypothetical protein YP_001380557.1 KEGG: ade:Adeh_3325 hypothetical protein YP_001380558.1 KEGG: ade:Adeh_3326 hypothetical protein YP_001380559.1 PFAM: protein of unknown function DUF192; KEGG: ade:Adeh_3327 protein of unknown function DUF192 YP_001380560.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_3328 hypothetical protein YP_001380561.1 KEGG: ade:Adeh_3329 putative vgr-related protein YP_001380562.1 KEGG: ade:Adeh_3330 hypothetical protein YP_001380563.1 KEGG: ade:Adeh_3330 hypothetical protein YP_001380564.1 PFAM: aminoglycoside phosphotransferase; KEGG: ade:Adeh_3331 homoserine kinase YP_001380565.1 KEGG: ade:Adeh_3332 hypothetical protein YP_001380566.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3333 tetratricopeptide repeat protein YP_001380567.1 PFAM: Forkhead-associated protein; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: ade:Adeh_3334 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001380568.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001380569.1 KEGG: mxa:MXAN_5140 hypothetical protein YP_001380570.1 TIGRFAM: Tol-Pal system YbgF; KEGG: ade:Adeh_3336 hypothetical protein YP_001380571.1 PFAM: OmpA/MotB domain protein; KEGG: ade:Adeh_3337 outer membrane protein, OmpA/MotB family YP_001380572.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: ade:Adeh_3338 two component, sigma54 specific, transcriptional regulator, fis family YP_001380573.1 KEGG: ade:Adeh_3339 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SMART: RNA binding S1 domain protein YP_001380574.1 PFAM: FG-GAP repeat protein; KEGG: mxa:MXAN_5182 FG-GAP repeat protein YP_001380575.1 PFAM: extracellular solute-binding protein family 5; KEGG: ade:Adeh_3341 extracellular solute-binding protein, family 5 YP_001380576.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_3342 periplasmic sensor signal transduction histidine kinase YP_001380577.1 KEGG: ade:Adeh_3343 hypothetical protein YP_001380578.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; KEGG: sus:Acid_5283 aminotransferase, class I and II YP_001380579.1 KEGG: mxa:MXAN_3774 hypothetical protein YP_001380580.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: ade:Adeh_3345 xanthine/uracil/vitamin C transporter YP_001380581.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_001380582.1 KEGG: ade:Adeh_3347 hypothetical protein YP_001380583.1 KEGG: ade:Adeh_3348 hypothetical protein YP_001380584.1 unknown function; when overproduced it confers drug-resistance YP_001380585.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: aha:AHA_2618 sensor histidine kinase YP_001380586.1 KEGG: ade:Adeh_3350 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001380587.1 PFAM: aminotransferase class V; KEGG: ade:Adeh_3351 aminotransferase, putative YP_001380588.1 binds and unfolds substrates as part of the ClpXP protease YP_001380589.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; KEGG: ade:Adeh_3353 ATP-dependent Clp protease, proteolytic subunit ClpP YP_001380590.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: ade:Adeh_3354 trigger factor YP_001380591.1 KEGG: ade:Adeh_3355 hypothetical protein YP_001380592.1 PFAM: Ham1 family protein; KEGG: ade:Adeh_3360 Ham1-like protein YP_001380593.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_001380594.1 PFAM: cell wall hydrolase/autolysin; KEGG: ade:Adeh_3362 N-acetylmuramoyl-L-alanine amidase YP_001380595.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein domain protein; KEGG: ade:Adeh_3363 selenide, water dikinase YP_001380596.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3364 tetratricopeptide repeata protein YP_001380597.1 KEGG: ade:Adeh_3365 hypothetical protein YP_001380598.1 SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3366 tetratricopeptide repeat protein YP_001380599.1 KEGG: ade:Adeh_3367 putative RecX protein YP_001380600.1 KEGG: ade:Adeh_2957 hypothetical protein YP_001380601.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ade:Adeh_3368 twitching motility protein YP_001380602.1 KEGG: ade:Adeh_3369 hypothetical protein YP_001380603.1 SMART: phospholipase D/Transphosphatidylase; KEGG: ade:Adeh_3370 phospholipase D/transphosphatidylase YP_001380604.1 forms a direct contact with the tRNA during translation YP_001380605.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001380606.1 PFAM: peptidase M20; peptidase M28; KEGG: sfu:Sfum_3053 peptidase M28 YP_001380608.1 PFAM: UvrD/REP helicase; KEGG: ade:Adeh_3374 UvrD/REP helicase YP_001380609.1 PFAM: peptidase U34 dipeptidase; KEGG: ade:Adeh_3825 peptidase U34, dipeptidase YP_001380610.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: ade:Adeh_3379 pseudouridine synthase, RluD YP_001380611.1 KEGG: ade:Adeh_3382 hypothetical protein YP_001380612.1 KEGG: mac:MA3739 hypothetical protein YP_001380613.1 KEGG: plt:Plut_1442 hypothetical protein YP_001380614.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3385 ABC transporter, ATPase subunit YP_001380615.1 KEGG: mxa:MXAN_1990 hypothetical protein YP_001380616.1 PFAM: peptidase M23B; KEGG: ade:Adeh_3386 peptidase M23B YP_001380617.1 PFAM: inositol monophosphatase; KEGG: ade:Adeh_3387 inositol-1(or 4)-monophosphatase YP_001380618.1 KEGG: ade:Adeh_2562 hypothetical protein YP_001380620.1 KEGG: ade:Adeh_2204 PKD YP_001380621.1 KEGG: ade:Adeh_3388 hypothetical protein YP_001380622.1 PFAM: histone deacetylase superfamily; KEGG: ade:Adeh_3389 histone deacetylase superfamily YP_001380623.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ade:Adeh_3390 hypothetical protein YP_001380624.1 KEGG: ade:Adeh_3391 hypothetical protein YP_001380625.1 KEGG: ade:Adeh_3392 hypothetical protein YP_001380626.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ade:Adeh_3393 UDP-N-acetylmuramate YP_001380627.1 PFAM: beta-lactamase; KEGG: ade:Adeh_3394 beta-lactamase YP_001380628.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: ade:Adeh_3395 peptidase S66, LD-carboxypeptidase A YP_001380629.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_3396 acetate--CoA ligase YP_001380630.1 PFAM: protein of unknown function UPF0118; KEGG: ade:Adeh_3397 protein of unknown function UPF0118 YP_001380631.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ade:Adeh_3398 peptidylprolyl isomerase, FKBP-type YP_001380632.1 PFAM: Glutathione S-transferase domain; KEGG: ade:Adeh_3399 glutathione S-transferase-like YP_001380633.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ade:Adeh_3400 FMN-binding pyridoxamine 5'-phosphate oxidase-related protein YP_001380634.1 PFAM: chemotaxis sensory transducer; KEGG: ade:Adeh_3401 methyl-accepting chemotaxis sensory transducer YP_001380635.1 KEGG: ade:Adeh_3404 hypothetical protein YP_001380636.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_3405 DEAD/DEAH box helicase-like YP_001380637.1 KEGG: ade:Adeh_3406 hypothetical protein YP_001380638.1 KEGG: ade:Adeh_3407 hypothetical protein YP_001380639.1 PFAM: protein of unknown function DUF1130; KEGG: ade:Adeh_3408 protein of unknown function DUF1130 YP_001380641.1 PFAM: Class I peptide chain release factor; KEGG: ade:Adeh_3409 class I peptide chain release factor YP_001380642.1 PFAM: transglutaminase domain protein; KEGG: ade:Adeh_3413 transglutaminase-like YP_001380643.1 PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: ade:Adeh_3414 hypothetical protein YP_001380644.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: RNA-processing protein HAT helix repeating-containing protein; Tetratricopeptide domain protein; KEGG: ade:Adeh_3415 tetratricopeptide repeat protein YP_001380645.1 KEGG: ade:Adeh_3416 hypothetical protein YP_001380646.1 KEGG: ade:Adeh_3417 hypothetical protein YP_001380647.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_3418 methyltransferase type 11 YP_001380648.1 PFAM: protein of unknown function DUF482; KEGG: ade:Adeh_3419 protein of unknown function DUF482 YP_001380649.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ade:Adeh_3420 fumarylacetoacetate (FAA) hydrolase YP_001380650.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: ade:Adeh_3421 maleylacetoacetate isomerase YP_001380651.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ade:Adeh_3422 4-hydroxyphenylpyruvate dioxygenase YP_001380652.1 PFAM: homogentisate 12-dioxygenase; KEGG: ade:Adeh_3423 homogentisate 1,2-dioxygenase YP_001380653.1 KEGG: ade:Adeh_3426 hypothetical protein YP_001380654.1 TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; KEGG: ade:Adeh_3427 alanine racemase YP_001380655.1 PFAM: CBS domain containing protein; KEGG: ade:Adeh_3298 putative signal-transduction protein with CBS domains YP_001380656.1 KEGG: ade:Adeh_3431 hypothetical protein YP_001380658.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: art:Arth_3251 glyoxalase/bleomycin resistance protein/dioxygenase YP_001380659.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: ade:Adeh_3302 FAD dependent oxidoreductase YP_001380660.1 KEGG: ade:Adeh_1661 hypothetical protein YP_001380661.1 PFAM: CoA-binding domain protein; KEGG: ade:Adeh_0995 CoA-binding protein YP_001380662.1 KEGG: art:Arth_3964 hypothetical protein YP_001380663.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_2955 DEAD/DEAH box helicase-like protein YP_001380664.1 PFAM: protein of unknown function DUF1255; KEGG: ppr:PBPRA3416 hypothetical protein YP_001380665.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ade:Adeh_3441 hypothetical protein YP_001380666.1 PFAM: Spore coat protein CotH; KEGG: mxa:MXAN_2420 putative lipoprotein YP_001380667.1 KEGG: ade:Adeh_0451 hypothetical protein YP_001380668.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: btl:BALH_p0037 hypothetical protein YP_001380670.1 KEGG: bur:Bcep18194_C6629 hypothetical protein YP_001380671.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mxa:MXAN_7204 hypothetical protein YP_001380672.1 KEGG: mxa:MXAN_0055 hypothetical protein YP_001380673.1 KEGG: ade:Adeh_3528 hypothetical protein YP_001380675.1 KEGG: ade:Adeh_2142 asparaginase YP_001380676.1 KEGG: ade:Adeh_3832 glutathione S-transferase-like YP_001380677.1 KEGG: mxa:MXAN_3125 hypothetical protein YP_001380678.1 KEGG: mxa:MXAN_3968 hypothetical protein YP_001380679.1 KEGG: ade:Adeh_3440 hypothetical protein YP_001380680.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ret:RHE_CH03135 probable CDP-alcohol phosphatidyltransferase protein YP_001380681.1 KEGG: ade:Adeh_3039 hypothetical protein YP_001380682.1 KEGG: mlo:msl0722 hypothetical protein YP_001380683.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_0348 alpha/beta hydrolase fold-1 YP_001380684.1 KEGG: ppd:Ppro_0937 protein of unknown function DUF1486 YP_001380685.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: ade:Adeh_0478 nickel-dependent hydrogenase, large subunit YP_001380686.1 PFAM: Polysulphide reductase NrfD; KEGG: dar:Daro_3972 polysulphide reductase, NrfD YP_001380687.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2 YP_001380688.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; KEGG: ade:Adeh_0481 hydrogenase (NiFe) small subunit (HydA) YP_001380689.1 PFAM: Polysulphide reductase NrfD; KEGG: ade:Adeh_0479 polysulphide reductase, NrfD YP_001380690.1 KEGG: ade:Adeh_2223 glycosyl hydrolase, BNR repeat YP_001380691.1 KEGG: ade:Adeh_2222 thiamineS YP_001380692.1 PFAM: OmpA/MotB domain protein; KEGG: mxa:MXAN_7037 putative chemotaxis MotB protein YP_001380693.1 PFAM: protein of unknown function DUF583; KEGG: ade:Adeh_4353 protein of unknown function DUF583 YP_001380694.1 KEGG: pin:Ping_0445 membrane protein involved in colicin uptake-like protein YP_001380695.1 KEGG: mxa:MXAN_6359 hypothetical protein YP_001380696.1 KEGG: mxa:MXAN_6358 hypothetical protein YP_001380697.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: ade:Adeh_1192 response regulator receiver (CheY-like) modulated CheB methylesterase YP_001380698.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mxa:MXAN_2686 sensor histidine kinase/response regulator CheA4 YP_001380699.1 PFAM: CheW domain protein; KEGG: mxa:MXAN_2685 chemotaxis protein CheW YP_001380700.1 PFAM: response regulator receiver; KEGG: mxa:MXAN_2684 response regulator CheY4 YP_001380701.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mxa:MXAN_2683 methyl accepting chemotaxis protein YP_001380702.1 PFAM: CheW domain protein; KEGG: ade:Adeh_3955 CheW protein YP_001380703.1 KEGG: mgm:Mmc1_3599 periplasmic binding protein-related protein YP_001380704.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mxa:MXAN_2683 methyl accepting chemotaxis protein YP_001380705.1 KEGG: cps:CPS_1264 extracellular solute-binding protein, family 7 YP_001380706.1 KEGG: ade:Adeh_0244 LigA YP_001380707.1 KEGG: pna:Pnap_2179 hypothetical protein YP_001380708.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_0448 transcriptional regulator, TetR family YP_001380709.1 KEGG: ade:Adeh_0447 hypothetical protein YP_001380710.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: sus:Acid_6584 protein of unknown function, zinc metallopeptidase putative YP_001380711.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dra:DR0647 cell division cycle protein 48-related protein YP_001380712.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mul:MUL_2398 hypothetical protein YP_001380713.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; APHP domain protein; KEGG: ade:Adeh_3524 peptidase S8 and S53 YP_001380714.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: tfu:Tfu_0366 methylated-DNA (protein)-cysteine S-methyltransferase YP_001380715.1 PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: reh:H16_B2551 DNA-3-methyladenine glycosylase II, adenosine deaminase YP_001380716.1 KEGG: ade:Adeh_2864 protein of unknown function UPF0153 YP_001380717.1 KEGG: ade:Adeh_3445 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001380718.1 KEGG: ade:Adeh_0958 hypothetical protein YP_001380719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: msm:MSMEG_1001 acetyltransferase, GNAT family protein, putative YP_001380720.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: ade:Adeh_3447 transcriptional regulator, LuxR family YP_001380721.1 TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: ade:Adeh_3448 threonine dehydratase YP_001380722.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ade:Adeh_3449 sigma-24 (FecI-like) YP_001380723.1 PFAM: protein kinase; WD-40 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_3450 serine/threonine protein kinase with WD40 repeats YP_001380724.1 KEGG: ade:Adeh_3451 hypothetical protein YP_001380725.1 KEGG: gsu:GSU1082 hypothetical protein YP_001380726.1 TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: ade:Adeh_3452 8-amino-7-oxononanoate synthase YP_001380727.1 KEGG: ade:Adeh_3453 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_001380728.1 KEGG: mxa:MXAN_3364 hypothetical protein YP_001380729.1 KEGG: ade:Adeh_3711 hypothetical protein YP_001380730.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001380731.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: ade:Adeh_3457 glycerol kinase YP_001380732.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_3458 alpha/beta hydrolase fold-1 YP_001380733.1 KEGG: ade:Adeh_3459 hypothetical protein YP_001380734.1 PFAM: periplasmic binding protein; KEGG: ttj:TTHA0723 iron(III) ABC transporter, solute-binding protein YP_001380735.1 KEGG: ade:Adeh_3460 hypothetical protein YP_001380736.1 PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: ade:Adeh_3461 helix-hairpin-helix DNA-binding, class 1 YP_001380737.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ade:Adeh_3462 TonB-dependent receptor YP_001380738.1 KEGG: ade:Adeh_0337 hypothetical protein YP_001380739.1 PFAM: periplasmic binding protein; KEGG: ade:Adeh_3464 periplasmic binding protein YP_001380740.1 PFAM: transport system permease protein; KEGG: ade:Adeh_3465 ABC Fe3+-siderophore transporter, inner membrane subunit YP_001380741.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3466 ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit YP_001380742.1 KEGG: ade:Adeh_3468 hypothetical protein YP_001380743.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: pca:Pcar_2760 transcriptional regulators, TraR/DksA family YP_001380744.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ade:Adeh_3469 UTP-glucose-1-phosphate uridylyltransferase YP_001380745.1 KEGG: ade:Adeh_3470 hypothetical protein YP_001380746.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_3471 two component, sigma54 specific, transcriptional regulator, fis family YP_001380747.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ade:Adeh_3472 response regulator receiver sensor signal transduction histidine kinase YP_001380748.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ade:Adeh_3473 diguanylate cyclase (GGDEF domain) YP_001380749.1 KEGG: ade:Adeh_3474 hypothetical protein YP_001380750.1 PFAM: protein of unknown function DUF296 YP_001380751.1 KEGG: ade:Adeh_3475 hypothetical protein YP_001380752.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: ade:Adeh_3476 cobalamin adenosyltransferase YP_001380753.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_3477 short-chain dehydrogenase/reductase SDR YP_001380754.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: ade:Adeh_3478 HesB/YadR/YfhF YP_001380755.1 PFAM: beta-lactamase domain protein; KEGG: ade:Adeh_3479 beta-lactamase-like YP_001380756.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_3480 short-chain dehydrogenase/reductase SDR YP_001380757.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: ade:Adeh_3481 hypothetical protein YP_001380758.1 KEGG: ade:Adeh_3482 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001380759.1 KEGG: ade:Adeh_2169 hypothetical protein YP_001380760.1 TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ade:Adeh_2170 nitrate reductase, alpha subunit YP_001380761.1 TIGRFAM: nitrate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_2171 nitrate reductase, beta subunit YP_001380762.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: ade:Adeh_2172 nitrate reductase molybdenum cofactor assembly chaperone YP_001380763.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; nitrite transporter; PFAM: Nitrate reductase gamma subunit; major facilitator superfamily MFS_1; KEGG: ade:Adeh_2174 nitrate transporter YP_001380765.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_001380766.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_3160 short-chain dehydrogenase/reductase SDR YP_001380767.1 KEGG: ade:Adeh_3484 hypothetical protein YP_001380768.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ade:Adeh_3154 uroporphyrin-III C-methyltransferase YP_001380769.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: ade:Adeh_3155 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like YP_001380770.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gvi:gll2062 threonine synthase YP_001380771.1 PFAM: thiamineS protein; KEGG: ade:Adeh_3494 thiamineS YP_001380772.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: ade:Adeh_3493 UBA/ThiF-type NAD/FAD binding, MoeZ/MoeB fmaily protein YP_001380773.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gme:Gmet_2988 cysteine synthase A YP_001380774.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rxy:Rxyl_0746 cysteine synthases YP_001380775.1 KEGG: ade:Adeh_3492 hypothetical protein YP_001380777.1 KEGG: ade:Adeh_0454 hypothetical protein YP_001380778.1 PFAM: Bile acid:sodium symporter; KEGG: mxa:MXAN_3817 sodium bile acid symporter family protein YP_001380779.1 KEGG: eba:ebA2304 putative pirin YP_001380780.1 KEGG: tbd:Tbd_2270 hypothetical protein YP_001380781.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aeh:Mlg_0662 methyltransferase type 12 YP_001380782.1 PFAM: creatinase; peptidase M24; KEGG: gme:Gmet_1720 peptidase M24 YP_001380783.1 KEGG: ssp:SSP0177 hypothetical protein YP_001380786.1 KEGG: rha:RHA1_ro03830 hypothetical protein YP_001380787.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mva:Mvan_0782 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001380788.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: ade:Adeh_2206 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001380789.1 KEGG: rxy:Rxyl_2561 hypothetical protein YP_001380790.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mxa:MXAN_4088 RNA polymerase sigma factor CarQ YP_001380791.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: dvl:Dvul_2376 methionine-R-sulfoxide reductase YP_001380792.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: aba:Acid345_2013 peptide methionine sulfoxide reductase YP_001380793.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ade:Adeh_2311 molybdopterin-binding oxidoreductase YP_001380794.1 KEGG: mxa:MXAN_0161 hypothetical protein YP_001380795.1 PFAM: protein of unknown function DUF417; KEGG: mva:Mvan_0783 protein of unknown function DUF417 YP_001380796.1 PFAM: response regulator receiver; KEGG: ade:Adeh_0984 response regulator receiver domain protein (CheY-like) YP_001380797.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0983 histidine kinase YP_001380798.1 KEGG: ade:Adeh_0896 glycosyltransferase YP_001380799.1 PFAM: nitrogen regulatory protein P-II; KEGG: ade:Adeh_2217 nitrogen regulatory protein P-II (GlnB, GlnK) YP_001380800.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ade:Adeh_2218 ammonium transporter YP_001380801.1 PFAM: glycosyl transferase group 1; KEGG: mtp:Mthe_0797 glycosyl transferase, group 1 YP_001380802.1 PFAM: YceI family protein; KEGG: ade:Adeh_1456 conserved hypothetical protein, YceI YP_001380803.1 PFAM: YceI family protein; KEGG: ade:Adeh_0932 YceI YP_001380804.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_0931 transcriptional regulator, LysR family YP_001380805.1 KEGG: mpt:Mpe_B0343 hypothetical protein YP_001380806.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: ade:Adeh_1022 tyrosine phosphatase YP_001380807.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: ade:Adeh_1023 arsenical-resistance protein YP_001380808.1 PFAM: regulatory protein ArsR; KEGG: ade:Adeh_1024 transcriptional regulator, ArsR family YP_001380809.1 PFAM: Thioredoxin domain; KEGG: ade:Adeh_1025 thioredoxin-related YP_001380810.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ade:Adeh_1026 cytochrome c biogenesis protein, transmembrane region YP_001380811.1 PFAM: permease; KEGG: ade:Adeh_1027 predicted transporter YP_001380812.1 TIGRFAM: redox-active disulfide protein 2; KEGG: ade:Adeh_1028 redox-active disulfide protein 2 YP_001380813.1 KEGG: ade:Adeh_0978 hypothetical protein YP_001380814.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rpb:RPB_1699 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001380815.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: cvi:CV1772 hypothetical protein YP_001380816.1 PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: reh:H16_B1380 putative AMP or GMP cyclase containing FHA domain YP_001380817.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: hbu:Hbut_1332 diadenosine tetraphosphatase-related serine/threonine protein phosphatase YP_001380818.1 KEGG: mva:Mvan_2314 translation initiation factor IF-2 YP_001380819.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_3131 short-chain dehydrogenase/reductase SDR YP_001380820.1 PFAM: regulatory protein TetR; KEGG: mag:amb2888 transcriptional regulator YP_001380821.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_0549 transcriptional regulator, LysR family YP_001380822.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_0548 alpha/beta hydrolase fold-1 YP_001380823.1 KEGG: rpe:RPE_0734 hypothetical protein YP_001380824.1 PFAM: beta-lactamase domain protein; KEGG: nfa:nfa28310 hypothetical protein YP_001380825.1 PFAM: regulatory protein LacI; regulatory protein TetR; KEGG: rxy:Rxyl_3190 transcriptional regulator, TetR family YP_001380826.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ade:Adeh_2294 Aha1 domain protein YP_001380827.1 KEGG: ade:Adeh_1035 hypothetical protein YP_001380828.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_1034 transcriptional regulator, LysR family YP_001380829.1 KEGG: hne:HNE_2921 hypothetical protein YP_001380830.1 PFAM: GYD family protein; KEGG: rle:RL2480 hypothetical protein YP_001380831.1 KEGG: rha:RHA1_ro00755 protein kinase/transcriptional regulator, LuxR family YP_001380832.1 PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; KEGG: mes:Meso_2457 transcriptional regulator, LuxR family YP_001380833.1 PFAM: alpha/beta hydrolase fold; KEGG: mes:Meso_2458 methyltransferase type 11 YP_001380836.1 PFAM: glutamine amidotransferase class-I; KEGG: mxa:MXAN_5631 class I glutamine amidotransferase family protein YP_001380837.1 PFAM: helix-turn-helix domain protein; KEGG: ade:Adeh_3535 transcriptional regulator, XRE family YP_001380838.1 KEGG: ade:Adeh_3536 hypothetical protein YP_001380840.1 KEGG: mxa:MXAN_4118 hypothetical protein YP_001380841.1 PFAM: IS66 Orf2 family protein; KEGG: mxa:MXAN_4117 transposase orf1, IS66 family YP_001380842.1 PFAM: transposase IS66; KEGG: ret:RHE_CH02014 putative insertion sequence transposase protein YP_001380843.1 KEGG: eba:ebA5435 conserved hypothetical protein, probable DNA/RNA helicase YP_001380846.1 PFAM: glycosyl transferase family 9; KEGG: ade:Adeh_3562 glycosyl transferase, family 9 YP_001380847.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ade:Adeh_3563 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001380848.1 PFAM: TPR repeat-containing protein; protein of unknown function DUF124; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3564 hypothetical protein YP_001380849.1 PFAM: Lytic transglycosylase catalytic; KEGG: ade:Adeh_3565 lytic transglycosylase, catalytic YP_001380850.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_3566 L-aspartate oxidase YP_001380851.1 KEGG: ade:Adeh_3567 hypothetical protein YP_001380852.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: ade:Adeh_3568 orotate phosphoribosyltransferase YP_001380853.1 PFAM: ParB domain protein nuclease; KEGG: ade:Adeh_3569 ParB-like nuclease YP_001380854.1 PFAM: protein of unknown function DUF583; KEGG: ade:Adeh_3570 protein of unknown function DUF583 YP_001380855.1 PFAM: protein of unknown function DUF583; KEGG: ade:Adeh_3571 protein of unknown function DUF583 YP_001380856.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_3572 alpha/beta hydrolase fold-1 YP_001380857.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mxa:MXAN_4639 TPR domain protein YP_001380858.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; KEGG: ade:Adeh_3574 response regulator receiver domain protein (CheY-like) YP_001380859.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ade:Adeh_3575 nitrilase/cyanide hydratase YP_001380860.1 KEGG: ade:Adeh_3576 hypothetical protein YP_001380861.1 PFAM: Fibronectin type III domain protein; KEGG: ade:Adeh_3577 fibronectin, type III YP_001380862.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: ade:Adeh_3578 semialdehyde dehydrogenase YP_001380863.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; domain of unknown function DUF1731; KEGG: ade:Adeh_3579 hypothetical protein YP_001380864.1 PFAM: peptidase M50; KEGG: ade:Adeh_3580 peptidase M50 YP_001380865.1 PFAM: peptidase M22 glycoprotease; KEGG: ade:Adeh_3581 peptidase M22, glycoprotease YP_001380866.1 TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: ade:Adeh_3582 peptidase M50, putative membrane-associated zinc metallopeptidase YP_001380867.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001380868.1 PFAM: phosphatidate cytidylyltransferase; KEGG: ade:Adeh_3584 phosphatidate cytidylyltransferase YP_001380869.1 TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: ade:Adeh_3585 undecaprenyl diphosphate synthase YP_001380870.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_3586 serine/threonine protein kinase YP_001380871.1 KEGG: ade:Adeh_3587 hypothetical protein YP_001380872.1 KEGG: ade:Adeh_3588 DNA replication protein-like YP_001380873.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_001380874.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; KEGG: ade:Adeh_3590 DNA-directed RNA polymerase, omega subunit YP_001380875.1 KEGG: ade:Adeh_3591 hypothetical protein YP_001380876.1 KEGG: ade:Adeh_3592 hypothetical protein YP_001380877.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001380878.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_001380879.1 KEGG: ade:Adeh_3597 hypothetical protein YP_001380880.1 KEGG: ade:Adeh_3596 hypothetical protein YP_001380881.1 KEGG: ade:Adeh_3598 hypothetical protein YP_001380882.1 PFAM: thioesterase superfamily protein; KEGG: mbu:Mbur_1555 phenylacetic acid degradation-related protein YP_001380883.1 KEGG: ade:Adeh_2224 hypothetical protein YP_001380884.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: ade:Adeh_3370 phospholipase D/transphosphatidylase YP_001380885.1 KEGG: mmu:239611 mucin 19 YP_001380886.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: ade:Adeh_1628 succinyl-CoA synthetase, alpha subunit YP_001380887.1 catalyzes the interconversion of succinyl-CoA and succinate YP_001380888.1 TIGRFAM: PAS sensor protein; propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: ade:Adeh_0357 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001380890.1 KEGG: aba:Acid345_4051 hypothetical protein YP_001380891.1 PFAM: cyclic nucleotide-binding; KEGG: ter:Tery_2905 cyclic nucleotide-binding protein YP_001380892.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: mxa:MXAN_2468 PBS lyase heat-like repeat/cyclic nucleotide-binding domain protein YP_001380893.1 KEGG: xfa:XF1738 hypothetical protein YP_001380894.1 KEGG: cph:Cpha266_1202 hypothetical protein YP_001380895.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: zinc-type alcohol dehydrogenase YP_001380896.1 KEGG: osa:4350659 Os11g0538400 YP_001380897.1 PFAM: LrgA family protein; KEGG: dar:Daro_3105 LrgA YP_001380898.1 PFAM: LrgB family protein; KEGG: bur:Bcep18194_C7636 LrgB-like protein YP_001380899.1 KEGG: ade:Adeh_0269 hypothetical protein YP_001380900.1 KEGG: ade:Adeh_3611 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop YP_001380901.1 KEGG: ade:Adeh_4128 HNH endonuclease YP_001380902.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: nfa:nfa28360 putative DNA glycosylase YP_001380903.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: mxa:MXAN_1432 L-allo-threonine aldolase YP_001380904.1 PFAM: peptidase M23B; KEGG: mxa:MXAN_1433 M23 peptidase domain protein YP_001380905.1 KEGG: bpa:BPP0449 autotransporter YP_001380906.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ade:Adeh_3612 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001380907.1 PFAM: phosphatidylglycerophosphatase A; KEGG: ade:Adeh_3613 phosphatidylglycerophosphatase A YP_001380908.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: ade:Adeh_3614 competence-damaged protein YP_001380909.1 KEGG: ade:Adeh_3615 hypothetical protein YP_001380910.1 KEGG: mxa:MXAN_1440 hypothetical protein YP_001380911.1 KEGG: ade:Adeh_3616 hypothetical protein YP_001380912.1 KEGG: chy:CHY_0233 putative cytochrome c YP_001380913.1 KEGG: ade:Adeh_3617 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_001380914.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: gsu:GSU0489 Mg chelatase-related protein YP_001380915.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: fal:FRAAL2302 putative DeoR-family transcriptional regulator YP_001380916.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: art:Arth_2061 bifunctional deaminase-reductase domain protein YP_001380917.1 PFAM: dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: sco:SCO6283 hypothetical protein YP_001380918.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: ade:Adeh_3631 uracil-DNA glycosylase superfamily YP_001380919.1 PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_3632 hypothetical protein YP_001380920.1 KEGG: mxa:MXAN_1924 hypothetical protein YP_001380921.1 KEGG: ade:Adeh_3633 MglA protein YP_001380922.1 PFAM: Roadblock/LC7 family protein; KEGG: ade:Adeh_3634 mutual gliding protein B YP_001380923.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_001380924.1 PFAM: conserved hypothetical protein 103; KEGG: ade:Adeh_3636 hypothetical protein YP_001380925.1 KEGG: ade:Adeh_3637 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_001380926.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ade:Adeh_3638 zinc-binding CMP/dCMP deaminase YP_001380927.1 KEGG: mxa:MXAN_6895 hypothetical protein YP_001380929.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_3640 radical SAM YP_001380930.1 PFAM: DSBA oxidoreductase; KEGG: ade:Adeh_3641 DsbA oxidoreductase YP_001380931.1 KEGG: ade:Adeh_3642 hypothetical protein YP_001380932.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: ade:Adeh_3643 pseudouridylate synthase YP_001380933.1 PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: mxa:MXAN_5194 OmpA domain protein YP_001380934.1 KEGG: mxa:MXAN_5193 putative treponemal membrane protein B precursor-like protein YP_001380935.1 KEGG: ade:Adeh_3646 hypothetical protein YP_001380936.1 KEGG: ade:Adeh_3647 parallel beta-helix repeat protein YP_001380937.1 PFAM: Tetratricopeptide TPR_2 repeat protein; PEGA domain protein; KEGG: ade:Adeh_3648 tetratricopeptide repeat protein YP_001380938.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_3649 serine/threonine protein kinase YP_001380939.1 PFAM: Forkhead-associated protein; KEGG: ade:Adeh_3650 FHA domain containing protein YP_001380940.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_3651 two component, sigma54 specific, transcriptional regulator, fis family YP_001380941.1 KEGG: ade:Adeh_3652 hypothetical protein YP_001380942.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ade:Adeh_3653 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001380943.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_3654 NADH dehydrogenase (quinone) YP_001380944.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_3655 NADH dehydrogenase (quinone) YP_001380945.1 KEGG: ade:Adeh_3656 respiratory-chain NADH dehydrogenase, subunit 1 YP_001380946.1 KEGG: ade:Adeh_3657 NAD-dependent dehydrogenase subunit YP_001380947.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_3658 NADH dehydrogenase (quinone) YP_001380948.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: ade:Adeh_3659 NADH-ubiquinone oxidoreductase, chain 49kDa YP_001380949.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ade:Adeh_3660 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_001380951.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_3663 GCN5-related N-acetyltransferase YP_001380952.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_3662 methyltransferase YP_001380953.1 PFAM: PspC domain protein; KEGG: ade:Adeh_3661 phage shock protein C, PspC YP_001380954.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001380955.1 TIGRFAM: putative nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase and related; KEGG: ade:Adeh_3664 nicotinate phosphoribosyltransferase related YP_001380956.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: ade:Adeh_3665 aconitate hydratase 1 YP_001380957.1 KEGG: ade:Adeh_3666 hypothetical protein YP_001380958.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gvi:gll0099 two-component hybrid sensor and regulator YP_001380959.1 KEGG: ade:Adeh_3667 hypothetical protein YP_001380960.1 KEGG: ade:Adeh_3669 hypothetical protein YP_001380961.1 PFAM: Citrate synthase; KEGG: ade:Adeh_3670 citrate (Si)-synthase YP_001380962.1 PFAM: peptidase M23B; KEGG: ade:Adeh_3671 hypothetical protein YP_001380963.1 KEGG: ade:Adeh_3672 hypothetical protein YP_001380964.1 PFAM: RNA binding S1 domain protein; KEGG: ade:Adeh_3673 ribosomal protein S1 YP_001380965.1 KEGG: ade:Adeh_3675 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001380966.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_001380967.1 PFAM: protein of unknown function DUF833; KEGG: ade:Adeh_3677 protein of unknown function DUF833 YP_001380968.1 KEGG: ade:Adeh_3678 hypothetical protein YP_001380969.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: ade:Adeh_3679 HD-GYP domain-like YP_001380970.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_001380971.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_001380972.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_001380973.1 PFAM: deoxynucleoside kinase; KEGG: ade:Adeh_3683 deoxynucleoside kinase YP_001380974.1 KEGG: ade:Adeh_3684 hypothetical protein YP_001380975.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: ade:Adeh_3685 dimethyladenosine transferase YP_001380976.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_001380977.1 PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3688 response regulator receiver domain protein (CheY-like) YP_001380978.1 PFAM: heat shock protein DnaJ domain protein; KEGG: ade:Adeh_3689 hypothetical protein YP_001380979.1 PFAM: diacylglycerol kinase catalytic region; KEGG: ade:Adeh_3690 hypothetical protein YP_001380980.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: ade:Adeh_3691 serine/threonine phosphatase YP_001380981.1 PFAM: Nucleotidyl transferase; KEGG: ade:Adeh_3692 nucleotidyl transferase YP_001380982.1 PFAM: GAF domain protein; KEGG: tte:TTE1743 GAF domain-containing protein YP_001380983.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: ade:Adeh_3693 major facilitator superfamily MFS_1 transporter YP_001380985.1 PFAM: transport-associated; KEGG: sus:Acid_7191 transport-associated YP_001380986.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: ade:Adeh_3694 exonuclease YP_001380987.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: ade:Adeh_3695 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001380988.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: ade:Adeh_3695 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001380989.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: ade:Adeh_3695 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001380991.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+ antiporter NhaA; KEGG: mxa:MXAN_3898 Na+/H+ antiporter NhaA YP_001380993.1 KEGG: mxa:MXAN_5113 universal stress family protein YP_001380994.1 KEGG: bha:BH2867 cation antiporter (Na+/Ca2+) YP_001380995.1 KEGG: hch:HCH_05070 predicted symporter YP_001380996.1 KEGG: hch:HCH_05071 predicted membrane protein YP_001380997.1 KEGG: mta:Moth_0569 hypothetical protein YP_001380998.1 PFAM: protein of unknown function DUF485; KEGG: ade:Adeh_3702 protein of unknown function DUF485 YP_001380999.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+ symporter; KEGG: ade:Adeh_3703 SSS sodium solute transporter superfamily YP_001381000.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ade:Adeh_3704 methyl-accepting chemotaxis sensory transducer YP_001381001.1 PFAM: metallophosphoesterase; KEGG: mxa:MXAN_2579 metallophosphoesterase/PKD domain protein YP_001381002.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ade:Adeh_3719 NADH-flavin oxidoreductase/NADH oxidase YP_001381003.1 KEGG: ade:Adeh_3717 hypothetical protein YP_001381004.1 KEGG: ade:Adeh_3714 hypothetical protein YP_001381005.1 KEGG: ade:Adeh_3712 hypothetical protein YP_001381007.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_3710 drug resistance transporter EmrB/QacA subfamily YP_001381008.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ade:Adeh_3707 cystathionine gamma-synthase YP_001381009.1 PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ade:Adeh_3706 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001381010.1 PFAM: aminoglycoside phosphotransferase; KEGG: ade:Adeh_3705 aminoglycoside phosphotransferase YP_001381011.1 KEGG: ade:Adeh_3720 putative nitric-oxide reductase YP_001381012.1 PFAM: beta-lactamase domain protein; KEGG: ade:Adeh_3721 beta-lactamase-like YP_001381013.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_3934 HNH nuclease YP_001381014.1 PFAM: protein of unknown function Met10; conserved hypothetical protein 95; SMART: PUA domain containing protein; KEGG: ade:Adeh_3722 hypothetical protein YP_001381015.1 PFAM: cyclic nucleotide-binding; phosphoribulokinase/uridine kinase; KEGG: ade:Adeh_3723 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001381016.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: ade:Adeh_3724 multi-sensor signal transduction histidine kinase YP_001381017.1 PFAM: tRNA synthetase class II (D K and N); KEGG: ade:Adeh_3726 tRNA synthetase, class II (D, K and N) YP_001381018.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_3732 alpha/beta hydrolase fold-1 YP_001381019.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_3733 methyltransferase type 11 YP_001381020.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_2168 putative PAS/PAC sensor protein YP_001381021.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_3740 serine/threonine protein kinase YP_001381022.1 PFAM: Forkhead-associated protein; KEGG: ade:Adeh_3741 FHA domain containing protein YP_001381023.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ade:Adeh_3742 enoyl-CoA hydratase/isomerase YP_001381024.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ade:Adeh_3743 biotin/lipoyl attachment protein YP_001381025.1 PFAM: response regulator receiver; KEGG: ade:Adeh_3745 response regulator receiver domain protein (CheY-like) YP_001381026.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mxa:MXAN_6491 cation-transporting ATPase, E1-E2 family YP_001381027.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_3746 short-chain dehydrogenase/reductase SDR YP_001381028.1 catalyzes the formation of L-tryptophan from indole and L-serine YP_001381029.1 PFAM: sodium/hydrogen exchanger; KEGG: mxa:MXAN_3848 sodium/hydrogen exchanger family protein YP_001381030.1 PFAM: sodium/hydrogen exchanger; KEGG: mxa:MXAN_3847 putative transporter YP_001381031.1 KEGG: ade:Adeh_3749 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_001381032.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_3750 ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit YP_001381033.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3751 ABC transporter, ATPase subunit YP_001381034.1 KEGG: tde:TDE0561 hypothetical protein YP_001381035.1 PFAM: protein of unknown function DUF1568; KEGG: ade:Adeh_3990 hypothetical protein YP_001381036.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_3760 short-chain dehydrogenase/reductase SDR YP_001381037.1 PFAM: protein of unknown function UPF0040; KEGG: ade:Adeh_3761 protein of unknown function UPF0040 YP_001381038.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ade:Adeh_3762 anti-sigma-factor antagonist (STAS) domain protein YP_001381039.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: ade:Adeh_3763 methyltransferase YP_001381040.1 KEGG: ade:Adeh_3764 hypothetical protein YP_001381041.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: ade:Adeh_3765 peptidoglycan glycosyltransferase YP_001381042.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ade:Adeh_3766 UDP-N-acetylmuramyl-tripeptide synthetase YP_001381043.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ade:Adeh_3767 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_001381044.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_001381045.1 TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ade:Adeh_3769 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_001381046.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: ade:Adeh_3770 cell cycle protein YP_001381047.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_001381048.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_001381049.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_001381050.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_001381051.1 KEGG: ade:Adeh_0223 hypothetical protein YP_001381052.1 KEGG: pen:PSEEN4266 hypothetical protein YP_001381054.1 PFAM: multicopper oxidase type 2; KEGG: tbd:Tbd_1072 conserved hypothetical protein containing twin-arginine translocation pathway signal YP_001381055.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: ade:Adeh_3776 cell division protein FtsQ YP_001381056.1 PFAM: cell division protein FtsA; KEGG: ade:Adeh_3777 cell division protein FtsA YP_001381057.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: ade:Adeh_3778 cell division protein FtsZ YP_001381058.1 KEGG: ade:Adeh_1681 PE-PGRS family protein YP_001381060.1 TIGRFAM: metal dependent phophohydrolase; KEGG: ade:Adeh_3779 uncharacterized domain HDIG YP_001381061.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: ade:Adeh_3016 hemerythrin-like, metal-binding protein YP_001381062.1 KEGG: ade:Adeh_3780 putative esterase YP_001381065.1 KEGG: bch:Bcen2424_1640 amino acid adenylation domain YP_001381066.1 KEGG: ade:Adeh_3783 hypothetical protein YP_001381067.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001381068.1 KEGG: mxa:MXAN_5792 putative lipoprotein YP_001381069.1 KEGG: ade:Adeh_1609 hypothetical protein YP_001381070.1 PFAM: putative methyltransferase; KEGG: ade:Adeh_3785 hypothetical protein YP_001381071.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: ade:Adeh_3789 peptidoglycan-binding lytic transglycosylase YP_001381072.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: ade:Adeh_3790 dihydrouridine synthase TIM-barrel protein nifR3 YP_001381073.1 PFAM: helix-turn-helix Fis-type; KEGG: ade:Adeh_3791 transcriptional regulator, fis family YP_001381074.1 PFAM: zinc/iron permease; KEGG: ade:Adeh_3792 zinc/iron transporter YP_001381075.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_1473 PAS/PAC sensor signal transduction histidine kinase YP_001381076.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: ade:Adeh_3793 glutamate--cysteine ligase, GCS2 YP_001381077.1 PFAM: regulatory protein LuxR; KEGG: ade:Adeh_3794 transcriptional regulator, LuxR family YP_001381078.1 KEGG: ade:Adeh_3795 hypothetical protein YP_001381079.1 TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: ade:Adeh_3796 carboxyl-terminal protease YP_001381080.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3797 hypothetical protein YP_001381081.1 KEGG: ade:Adeh_3798 hypothetical protein YP_001381082.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: ade:Adeh_3799 ExsB protein YP_001381083.1 KEGG: ade:Adeh_3800 hypothetical protein YP_001381084.1 KEGG: ade:Adeh_3801 hypothetical protein YP_001381085.1 KEGG: ade:Adeh_3802 hypothetical protein YP_001381086.1 KEGG: ade:Adeh_3803 putative vgr-related protein YP_001381087.1 PFAM: ferric-uptake regulator; KEGG: ade:Adeh_3806 ferric uptake regulator, FUR family YP_001381088.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: ade:Adeh_3807 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_001381089.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ade:Adeh_3808 single-strand binding protein YP_001381090.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2883 methyltransferase type 11 YP_001381091.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: jan:Jann_3711 methyltransferase type 12 YP_001381092.1 KEGG: sco:SCO3312 hypothetical protein YP_001381093.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_3810 tetratricopeptide repeat protein YP_001381094.1 KEGG: sde:Sde_3991 hypothetical protein YP_001381095.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ajs:Ajs_2120 transcriptional regulator, BadM/Rrf2 family YP_001381096.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: psb:Psyr_5111 dTDP-glucose 4,6-dehydratase YP_001381097.1 PFAM: DNA repair protein RadC; KEGG: ade:Adeh_3824 DNA repair protein RadC YP_001381098.1 PFAM: Cna B domain protein; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein YP_001381099.1 PFAM: DNA repair protein RadC; KEGG: ade:Adeh_3824 DNA repair protein RadC YP_001381100.1 PFAM: DNA repair protein RadC; KEGG: ade:Adeh_3824 DNA repair protein RadC YP_001381101.1 KEGG: mxa:MXAN_6584 NHL repeat protein YP_001381102.1 PFAM: YceI family protein; KEGG: ade:Adeh_3826 YceI YP_001381103.1 KEGG: ade:Adeh_3827 hypothetical protein YP_001381104.1 catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate YP_001381105.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway YP_001381106.1 PFAM: aminotransferase class I and II; KEGG: ade:Adeh_3830 aminotransferase, class I and II YP_001381107.1 catalyzes the conversion of NADPH to NADH YP_001381108.1 KEGG: ade:Adeh_3833 hypothetical protein YP_001381109.1 KEGG: ade:Adeh_3834 mucin-associated surface protein (MASP), putative YP_001381110.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ade:Adeh_3835 cobyrinic acid a,c-diamide synthase YP_001381111.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: ade:Adeh_3836 heat repeat protein YP_001381112.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_3837 major facilitator superfamily MFS_1 transporter YP_001381113.1 KEGG: ade:Adeh_3838 hypothetical protein YP_001381114.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ade:Adeh_3839 hypothetical protein YP_001381115.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: ade:Adeh_3840 phosphoribosylformylglycinamidine synthetase PurS YP_001381116.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001381117.1 KEGG: ade:Adeh_3842 hypothetical protein YP_001381118.1 PFAM: response regulator receiver; KEGG: ade:Adeh_3844 response regulator receiver domain protein (CheY-like) YP_001381119.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ade:Adeh_3845 peptidase U62, modulator of DNA gyrase YP_001381120.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ade:Adeh_3846 peptidase U62, modulator of DNA gyrase YP_001381121.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_3847 alpha/beta hydrolase fold-1 YP_001381122.1 KEGG: rpa:RPA3572 hypothetical protein YP_001381123.1 KEGG: ade:Adeh_2820 hypothetical protein YP_001381124.1 KEGG: ade:Adeh_2821 hypothetical protein YP_001381125.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_2822 tetratricopeptide repeat protein YP_001381126.1 PFAM: type II secretion system protein; KEGG: ade:Adeh_2823 type II secretion system protein YP_001381127.1 PFAM: type II secretion system protein; KEGG: ade:Adeh_2824 type II secretion system protein YP_001381128.1 PFAM: type II secretion system protein E; KEGG: ade:Adeh_2825 type II secretion system protein E YP_001381129.1 KEGG: ade:Adeh_2826 Flp pilus assembly protein ATPase CpaE-like YP_001381130.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: ade:Adeh_2827 type II and III secretion system protein YP_001381131.1 PFAM: SAF domain protein; KEGG: ade:Adeh_2828 Flp pilus assembly CpaB YP_001381132.1 PFAM: TadE family protein; KEGG: ade:Adeh_2829 TadE-like YP_001381133.1 PFAM: peptidase A24A prepilin type IV; KEGG: ade:Adeh_2830 peptidase A24A, prepilin type IV YP_001381134.1 PFAM: Flp/Fap pilin component; KEGG: ade:Adeh_2831 Flp/Fap pilin component YP_001381135.1 KEGG: ade:Adeh_3848 hypothetical protein YP_001381136.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_3849 short-chain dehydrogenase/reductase SDR YP_001381137.1 KEGG: ade:Adeh_3850 hypothetical protein YP_001381138.1 KEGG: ade:Adeh_3851 hypothetical protein YP_001381139.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ade:Adeh_3852 sigma-24 (FecI-like) YP_001381140.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001381141.1 KEGG: hch:HCH_06019 hypothetical protein YP_001381142.1 PFAM: phage integrase family protein; KEGG: sfu:Sfum_1111 phage integrase family protein YP_001381143.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: ade:Adeh_1463 DNA-binding excisionase/Xis YP_001381145.1 KEGG: aav:Aave_4521 hypothetical protein YP_001381146.1 PFAM: histidine triad (HIT) protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mxa:MXAN_0787 helicase, DEAD/DEAH family YP_001381147.1 KEGG: swo:Swol_2007 ATPase (AAA+ superfamily)-like protein YP_001381148.1 KEGG: ter:Tery_4272 hypothetical protein YP_001381149.1 PFAM: protein of unknown function DUF1156; KEGG: swo:Swol_2009 hypothetical protein YP_001381150.1 PFAM: protein of unknown function DUF1156; KEGG: swo:Swol_2009 hypothetical protein YP_001381151.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: swo:Swol_2010 hypothetical protein YP_001381152.1 KEGG: rpc:RPC_3934 hypothetical protein YP_001381153.1 KEGG: bxe:Bxe_A0848 hypothetical protein YP_001381154.1 PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A0849 hypothetical protein YP_001381155.1 PFAM: helicase domain protein; peptidase S24 S26A and S26B; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mxa:MXAN_0787 helicase, DEAD/DEAH family YP_001381156.1 KEGG: mbu:Mbur_0592 hypothetical protein YP_001381157.1 PFAM: Domain of unknown function DUF1863; KEGG: pol:Bpro_4746 hypothetical protein YP_001381158.1 PFAM: ExsB family protein; KEGG: cth:Cthe_3105 ExsB protein YP_001381159.1 PFAM: HhH-GPD family protein; KEGG: mja:MJ0724 8-oxoguanine DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase YP_001381160.1 KEGG: rfr:Rfer_1231 hypothetical protein YP_001381161.1 SMART: TIR protein; KEGG: mag:amb3347 Calphotin; Microtubule-associated protein 4 YP_001381162.1 PFAM: metallophosphoesterase; KEGG: cvi:CV2432 hypothetical protein YP_001381163.1 KEGG: sdn:Sden_3576 hypothetical protein YP_001381165.1 KEGG: csa:Csal_2788 hypothetical protein YP_001381166.1 KEGG: sth:STH276 transposase YP_001381172.1 KEGG: ade:Adeh_3797 hypothetical protein YP_001381173.1 PFAM: UvrD/REP helicase; KEGG: ade:Adeh_2512 UvrD/REP helicase YP_001381174.1 KEGG: ade:Adeh_0244 LigA YP_001381176.1 KEGG: sth:STH2520 hypothetical protein YP_001381177.1 KEGG: ade:Adeh_3925 transcriptional regulator-like YP_001381178.1 KEGG: ade:Adeh_3926 transcriptional regulator-like YP_001381179.1 KEGG: ade:Adeh_0244 LigA YP_001381180.1 KEGG: ade:Adeh_0244 LigA YP_001381183.1 SMART: Protein tyrosine phosphatase, catalytic region; KEGG: azo:azo2643 putative dual specificity protein phosphatase YP_001381184.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mxa:MXAN_1364 hypothetical protein YP_001381187.1 PFAM: SEC-C motif domain protein; KEGG: ade:Adeh_3880 hypothetical protein YP_001381188.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: ade:Adeh_3184 glycosyltransferase 36 YP_001381190.1 KEGG: ade:Adeh_2234 hypothetical protein YP_001381191.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: dde:Dde_0628 DNA polymerase III, epsilon subunit YP_001381192.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: dde:Dde_0629 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001381193.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; Cache type 2 domain protein; PAS fold-4 domain protein; KEGG: dvl:Dvul_2947 methyl-accepting chemotaxis sensory transducer YP_001381194.1 KEGG: bur:Bcep18194_C6926 hypothetical protein YP_001381195.1 PFAM: sodium/hydrogen exchanger; KEGG: dar:Daro_2072 sodium/hydrogen exchanger YP_001381196.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pna:Pnap_2403 antibiotic biosynthesis monooxygenase YP_001381197.1 PFAM: ROK family protein; KEGG: gbe:GbCGDNIH1_0537 polyphosphate glucokinase YP_001381198.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mxa:MXAN_6057 glyoxalase family protein YP_001381199.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_001381200.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth YP_001381201.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tbd:Tbd_1055 S-adenosylmethionine-dependent methyltransferase YP_001381202.1 PFAM: Thioredoxin domain; KEGG: chy:CHY_0560 thioredoxin/thioredoxin-disulfide reductase YP_001381203.1 KEGG: ade:Adeh_3889 hypothetical protein YP_001381204.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ade:Adeh_3176 cold-shock DNA-binding domain protein YP_001381205.1 KEGG: mxa:MXAN_4361 hypothetical protein YP_001381206.1 PFAM: domain of unknown function DUF1745; KEGG: cyb:CYB_1819 hypothetical protein YP_001381208.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mxa:MXAN_0110 cardiolipin synthase YP_001381209.1 PFAM: Urease accessory protein UreD; KEGG: ath:AT2G35035 nickel ion binding YP_001381210.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001381211.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001381212.1 KEGG: osa:4328424 Os02g0168000 YP_001381213.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: ath:AT2G34470 UREG; metal ion binding / nickel ion binding / nucleotide binding YP_001381214.1 PFAM: methyladenine glycosylase; KEGG: ade:Adeh_2154 DNA-3-methyladenine glycosylase I YP_001381215.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ade:Adeh_3918 glyoxalase/bleomycin resistance protein/dioxygenase YP_001381216.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_3529 PAS/PAC sensor hybrid histidine kinase YP_001381217.1 PFAM: protein of unknown function DUF81; KEGG: sfu:Sfum_0761 protein of unknown function DUF81 YP_001381219.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: vei:Veis_0811 SNF2-related protein YP_001381220.1 PFAM: zinc finger SWIM domain protein; KEGG: nha:Nham_2838 zinc finger, SWIM-type YP_001381221.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: mva:Mvan_0427 NAD-dependent epimerase/dehydratase YP_001381222.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mxa:MXAN_0203 RNA polymerase sigma-70 factor, ECF subfamily YP_001381223.1 PFAM: malate synthase; KEGG: ade:Adeh_3905 malate synthase YP_001381224.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_001381225.1 KEGG: ava:Ava_0218 putative phenylacetate-CoA ligase YP_001381226.1 PFAM: protein of unknown function RIO1; protein kinase; Tetratricopeptide TPR_4; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_2796 serine/threonine protein kinase YP_001381227.1 PFAM: short-chain dehydrogenase/reductase SDR; NmrA family protein; KR domain protein; KEGG: mlo:mll7605 hypothetical protein YP_001381229.1 PFAM: UspA domain protein; KEGG: ade:Adeh_2675 universal stress protein UspA YP_001381230.1 KEGG: ade:Adeh_0959 hypothetical protein YP_001381231.1 PFAM: UspA domain protein; KEGG: ade:Adeh_1448 universal stress protein UspA YP_001381232.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: mba:Mbar_A2345 superoxide dismutase YP_001381233.1 PFAM: regulatory protein MarR; KEGG: ade:Adeh_2919 transcriptional regulator, MarR family YP_001381234.1 KEGG: bja:blr7587 hypothetical protein YP_001381235.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: ade:Adeh_0191 bacterioferritin YP_001381236.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: rxy:Rxyl_1993 glycoside hydrolase, family 3-like protein YP_001381237.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: ade:Adeh_1594 sigma 32 (RpoH) YP_001381238.1 SMART: helix-turn-helix domain protein YP_001381240.1 KEGG: gsu:GSU1898 hypothetical protein YP_001381241.1 TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; KEGG: aor:AO090038000098 squalene cyclase Pfam: Prenyltrans A2M_comp YP_001381242.1 PFAM: Squalene/phytoene synthase; KEGG: dge:Dgeo_0523 squalene/phytoene synthase YP_001381243.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bha:BH1848 hypothetical protein YP_001381244.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_001381245.1 PFAM: Radical SAM domain protein; KEGG: ava:Ava_1219 radical SAM YP_001381246.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: gme:Gmet_2821 NAD-dependent epimerase/dehydratase YP_001381247.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rru:Rru_A0098 cystathionine gamma-synthase YP_001381248.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: gme:Gmet_2779 ribonuclease BN YP_001381249.1 PFAM: UspA domain protein; KEGG: ade:Adeh_0850 universal stress protein UspA YP_001381250.1 PFAM: protein of unknown function DUF169; KEGG: sth:STH972 hypothetical protein YP_001381251.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: ade:Adeh_4171 lipid A biosynthesis acyltransferase YP_001381252.1 KEGG: ade:Adeh_3175 hypothetical protein YP_001381254.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; KEGG: ade:Adeh_0464 biotin carboxylase YP_001381255.1 PFAM: carboxyl transferase; KEGG: ade:Adeh_0463 propionyl-CoA carboxylase YP_001381256.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: noc:Noc_0294 heavy metal efflux pump YP_001381257.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: noc:Noc_0293 secretion protein HlyD YP_001381258.1 KEGG: noc:Noc_0292 outer membrane efflux protein YP_001381259.1 PFAM: peptidase M48 Ste24p; peptidase M56 BlaR1; KEGG: noc:Noc_0291 hypothetical protein YP_001381260.1 PFAM: Penicillinase repressor; KEGG: noc:Noc_0290 penicillinase repressor YP_001381261.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mxa:MXAN_3426 RNA polymerase sigma-70 factor, ECF subfamily YP_001381262.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; KEGG: mxa:MXAN_3415 copper-translocating P-type ATPase YP_001381263.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ppd:Ppro_0799 methyltransferase type 11 YP_001381264.1 KEGG: ade:Adeh_3290 hypothetical protein YP_001381265.1 PFAM: FeoA family protein; KEGG: ade:Adeh_3291 FeoA YP_001381266.1 PFAM: FeoA family protein; KEGG: ade:Adeh_3292 FeoA YP_001381267.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: ade:Adeh_3293 ferrous iron transport protein B YP_001381268.1 PFAM: Polysulphide reductase NrfD; KEGG: cph:Cpha266_2564 polysulphide reductase, NrfD YP_001381269.1 KEGG: ade:Adeh_2629 hypothetical protein YP_001381270.1 KEGG: sfu:Sfum_0512 protein of unknown function DUF395, YeeE/YedE YP_001381271.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tth:TTC0154 NrfC protein YP_001381272.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: tth:TTC0155 thiosulfate reductase precursor YP_001381273.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: ade:Adeh_3896 hypothetical protein YP_001381274.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: ade:Adeh_0975 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001381275.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sus:Acid_1870 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001381276.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: mtp:Mthe_0156 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_001381278.1 KEGG: ade:Adeh_0244 LigA YP_001381279.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ade:Adeh_3176 cold-shock DNA-binding domain protein YP_001381280.1 KEGG: tcr:503453.70 hypothetical protein Pfam: ECH DOC 3HCDH PROSITE: ALA_RICH PRO_RICH YP_001381281.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_4100 hemerythrin-like, metal-binding protein YP_001381282.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_1006 radical SAM YP_001381283.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: gvi:glr1699 protein-L-isoaspartate O-methyltransferase YP_001381284.1 TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: mxa:MXAN_7156 putative ribose-phosphate pyrophosphokinase YP_001381285.1 PFAM: regulatory protein LuxR; KEGG: ade:Adeh_1444 transcriptional regulator, LuxR family YP_001381286.1 KEGG: ade:Adeh_2504 hypothetical protein YP_001381287.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ade:Adeh_2146 cytochrome c biogenesis protein YP_001381288.1 PFAM: peptidase S41; KEGG: ade:Adeh_2935 peptidase S41 YP_001381289.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ade:Adeh_2131 dihydrolipoamide acetyltransferase YP_001381290.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_001381291.1 TIGRFAM: Alcohol dehydrogenase zinc-binding type 2; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_0056 alcohol dehydrogenase GroES-like protein YP_001381292.1 KEGG: rme:Rmet_1219 hypothetical protein YP_001381293.1 PFAM: RES domain protein; KEGG: pau:PA14_51010 hypothetical protein YP_001381294.1 KEGG: ade:Adeh_3557 hypothetical protein YP_001381297.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_2118 metallophosphoesterase YP_001381298.1 PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: ana:alr4412 unknown protein YP_001381300.1 PFAM: Helix-turn-helix type 11 domain protein YP_001381301.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ade:Adeh_0431 exodeoxyribonuclease III YP_001381302.1 PFAM: protein of unknown function DUF72; KEGG: ade:Adeh_0430 protein of unknown function DUF72 YP_001381303.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; KEGG: ade:Adeh_0429 diguanylate cyclase (GGDEF domain) YP_001381304.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_0427 outer membrane efflux protein YP_001381305.1 PFAM: regulatory protein MarR; KEGG: mxa:MXAN_6646 transcriptional regulator, MarR family YP_001381306.1 TIGRFAM: MJ0042 family finger-like protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_0425 zinc finger/thioredoxin putative YP_001381307.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_0424 phospholipid/glycerol acyltransferase YP_001381308.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ade:Adeh_0423 NAD-dependent epimerase/dehydratase YP_001381309.1 KEGG: ade:Adeh_0422 hypothetical protein YP_001381310.1 PFAM: Hsp33 protein; KEGG: ade:Adeh_0421 HSP33 protein YP_001381311.1 PFAM: phosphoribosyltransferase; KEGG: ade:Adeh_0420 phosphoribosyltransferase YP_001381312.1 TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: ade:Adeh_0419 selenocysteine-specific translation elongation factor YP_001381313.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ade:Adeh_0418 multi-sensor signal transduction histidine kinase YP_001381314.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0417 two component, sigma54 specific, transcriptional regulator, fis family YP_001381315.1 KEGG: ade:Adeh_0416 response regulator receiver domain protein (CheY-like) YP_001381316.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_0415 proton-translocating NADH-quinone oxidoreductase, chain N YP_001381317.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_0414 proton-translocating NADH-quinone oxidoreductase, chain M YP_001381318.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_0413 proton-translocating NADH-quinone oxidoreductase, chain L YP_001381319.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis YP_001381320.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_4042 HNH endonuclease YP_001381321.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ade:Adeh_0411 two component transcriptional regulator, winged helix family YP_001381322.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0410 periplasmic sensor signal transduction histidine kinase YP_001381323.1 KEGG: ade:Adeh_2907 hypothetical protein YP_001381324.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate YP_001381325.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth YP_001381326.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_0406 hypothetical protein YP_001381327.1 SMART: ParB domain protein nuclease; KEGG: ade:Adeh_0405 ParB-like nuclease YP_001381328.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_0404 ABC transporter, ATPase subunit YP_001381329.1 KEGG: ppd:Ppro_1930 SAM-dependent methyltransferases YP_001381330.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Ribosomal small subunit Rsm22; KEGG: ade:Adeh_0403 methyltransferase type 12 YP_001381331.1 TIGRFAM: ribonuclease Z; KEGG: ade:Adeh_0401 ribonuclease Z YP_001381332.1 KEGG: cvi:CV3911 hypothetical protein YP_001381333.1 KEGG: ade:Adeh_0400 protein of unknown function DUF990 YP_001381334.1 KEGG: ade:Adeh_0399 ABC transporter, inner membrane subunit YP_001381335.1 KEGG: mgm:Mmc1_0139 oxidoreductase FAD/NAD(P)-binding domain protein YP_001381336.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: ade:Adeh_2796 serine/threonine protein kinase YP_001381337.1 KEGG: ade:Adeh_3805 hypothetical protein YP_001381338.1 PFAM: proteinase inhibitor I4 serpin; KEGG: det:DET0222 serine protease inhibitor family protein YP_001381339.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK1716 hypothetical protein YP_001381340.1 KEGG: ade:Adeh_0525 hypothetical protein YP_001381342.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: ade:Adeh_0397 thimet oligopeptidase YP_001381343.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001381344.1 PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; KEGG: ade:Adeh_0390 FAD-binding monooxygenase YP_001381345.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ade:Adeh_0389 AMP-dependent synthetase and ligase YP_001381346.1 KEGG: ade:Adeh_0388 hypothetical protein YP_001381347.1 PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: ade:Adeh_0387 chalcone/stilbene synthase-like YP_001381348.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_0347 sensory box histidine kinase YP_001381349.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_0385 AAA ATPase, ClpA/B YP_001381350.1 PFAM: beta-lactamase domain protein; KEGG: ade:Adeh_2964 beta-lactamase-like YP_001381351.1 PFAM: DoxX family protein; KEGG: vch:VCA1019 hypothetical protein YP_001381352.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate YP_001381353.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_001381354.1 KEGG: ade:Adeh_0380 hypothetical protein YP_001381355.1 KEGG: ade:Adeh_0379 hypothetical protein YP_001381356.1 PFAM: Polyprenyl synthetase; KEGG: ade:Adeh_0378 farnesyltranstransferase YP_001381357.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ade:Adeh_2464 permease YjgP/YjgQ YP_001381358.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rpa:RPA3980 nucleotide sugar epimerase YP_001381359.1 KEGG: azo:azo2160 conserved hypothetical membrane protein YP_001381360.1 PFAM: glycosyl transferase family 2; KEGG: dar:Daro_3480 glycosyl transferase, family 2 YP_001381361.1 PFAM: glycosyl transferase family 39; KEGG: azo:azo0746 hypothetical membrane protein YP_001381362.1 PFAM: band 7 protein; KEGG: mxa:MXAN_6924 SPFH/band 7 domain protein YP_001381363.1 KEGG: mxa:MXAN_4073 putative glycosyl hydrolase YP_001381364.1 KEGG: ade:Adeh_0376 hypothetical protein YP_001381365.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: ade:Adeh_0375 carboxylyase-related protein YP_001381366.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0374 ubiquinone/menaquinone biosynthesis methyltransferase YP_001381367.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: ade:Adeh_0373 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001381368.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_0372 hypothetical protein YP_001381369.1 PFAM: protein of unknown function DUF178; Radical SAM domain protein; KEGG: ade:Adeh_0371 hypothetical protein YP_001381370.1 PFAM: amidohydrolase; KEGG: ade:Adeh_0370 amidohydrolase 1 YP_001381371.1 TIGRFAM: 4-hydroxybenzoate polyprenyltransferase, putative; PFAM: UbiA prenyltransferase; KEGG: ade:Adeh_0369 4-hydroxybenzoate polyprenyltransferase, putative YP_001381372.1 KEGG: ade:Adeh_0368 regulatory protein, ArsR YP_001381373.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: ade:Adeh_0367 multi-sensor signal transduction histidine kinase YP_001381374.1 KEGG: ade:Adeh_0244 LigA YP_001381375.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_001381376.1 TIGRFAM: modification methylase, HemK family; PFAM: putative RNA methylase; methyltransferase small; KEGG: ade:Adeh_0365 modification methylase, HemK family YP_001381377.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_001381378.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_001381379.1 KEGG: ade:Adeh_0362 hypothetical protein YP_001381380.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ade:Adeh_0361 molybdopterin-binding oxidoreductase YP_001381381.1 PFAM: phage integrase family protein; KEGG: mta:Moth_1796 phage integrase YP_001381382.1 KEGG: ade:Adeh_3259 hypothetical protein YP_001381385.1 PFAM: putative RNA methylase; DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_3798 putative RNA methylase YP_001381386.1 KEGG: hpj:jhp1392 hypothetical protein YP_001381387.1 PFAM: protein of unknown function UPF0150; SMART: regulatory protein MerR; KEGG: fal:FRAAL2275 putative MerR-family transcriptional regulator YP_001381388.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: ade:Adeh_3222 hypothetical protein YP_001381389.1 KEGG: mxa:MXAN_2319 hypothetical protein YP_001381390.1 KEGG: mxa:MXAN_2320 hypothetical protein YP_001381391.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: tbd:Tbd_1692 putative ATPase YP_001381392.1 KEGG: mgm:Mmc1_1292 hypothetical protein YP_001381393.1 KEGG: sai:Saci_1833 hypothetical protein YP_001381395.1 PFAM: Patatin; KEGG: abo:ABO_1415 hypothetical protein YP_001381396.1 KEGG: bpm:BURPS1710b_A2434 200 kDa antigen p200, putative YP_001381397.1 PFAM: carbon starvation protein CstA; KEGG: dvl:Dvul_2354 carbon starvation protein CstA YP_001381398.1 KEGG: ade:Adeh_2141 hypothetical protein YP_001381400.1 PFAM: MaoC domain protein dehydratase; KEGG: rha:RHA1_ro08872 possible acyl dehydratase YP_001381401.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ade:Adeh_2256 FAD-binding monooxygenase YP_001381402.1 KEGG: ade:Adeh_2255 putative flavoprotein YP_001381403.1 PFAM: OsmC family protein; KEGG: ade:Adeh_2254 OsmC-like protein YP_001381404.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_2253 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001381405.1 KEGG: ade:Adeh_0321 hypothetical protein YP_001381406.1 PFAM: amino acid permease-associated region; KEGG: cvi:CV3432 probable amino acid permease YP_001381407.1 PFAM: aminotransferase class I and II; KEGG: ade:Adeh_3083 aminotransferase, class I and II YP_001381408.1 KEGG: ade:Adeh_4129 hypothetical protein YP_001381409.1 PFAM: Collagen triple helix repeat; KEGG: sak:SAK_0722 collagen-like surface protein, putative YP_001381410.1 KEGG: cph:Cpha266_2598 hypothetical protein YP_001381412.1 KEGG: ade:Adeh_1130 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001381413.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: mxa:MXAN_0736 sensory box histidine kinase YP_001381414.1 PFAM: response regulator receiver; KEGG: mxa:MXAN_0229 sensor histidine kinase/response regulator YP_001381415.1 PFAM: Fibronectin type III domain protein; KEGG: cth:Cthe_1235 cellulose 1,4-beta-cellobiosidase YP_001381416.1 PFAM: protein of unknown function DUF456; KEGG: ade:Adeh_0303 protein of unknown function DUF456 YP_001381417.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_6716 putative TonB dependent receptor YP_001381418.1 PFAM: EAL domain protein; KEGG: ade:Adeh_0769 diguanylate phosphodiesterase (EAL domain) YP_001381419.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_0302 two component, sigma54 specific, transcriptional regulator, fis family YP_001381420.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0301 periplasmic sensor signal transduction histidine kinase YP_001381421.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: ade:Adeh_0853 TonB-like YP_001381423.1 KEGG: mxa:MXAN_3421 hypothetical protein YP_001381424.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_4106 outer membrane efflux protein YP_001381425.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ade:Adeh_4105 secretion protein HlyD YP_001381426.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ade:Adeh_4104 heavy metal efflux pump CzcA YP_001381427.1 KEGG: ade:Adeh_3089 hypothetical protein YP_001381428.1 PFAM: copper resistance B precursor; KEGG: tbd:Tbd_1325 probable copper resistance protein B YP_001381429.1 TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bpe:BP3315 copper resitance protein YP_001381430.1 PFAM: Fmu (Sun) domain protein; KEGG: ade:Adeh_4107 tRNA and rRNA cytosine-C5-methylase YP_001381431.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001381432.1 PFAM: NUDIX hydrolase; KEGG: ade:Adeh_4112 NUDIX hydrolase YP_001381433.1 KEGG: ade:Adeh_4113 hypothetical protein YP_001381434.1 KEGG: ade:Adeh_4114 hypothetical protein YP_001381435.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: ade:Adeh_4115 Sel1 family protein YP_001381436.1 PFAM: response regulator receiver; KEGG: ade:Adeh_4116 response regulator receiver domain protein (CheY-like) YP_001381437.1 KEGG: ade:Adeh_4117 putative lipoprotein YP_001381438.1 PFAM: NnrS family protein; KEGG: bba:Bd2594 hypothetical protein YP_001381439.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_4118 acyl-CoA dehydrogenase YP_001381440.1 PFAM: glycine cleavage H-protein; KEGG: ade:Adeh_4119 glycine cleavage H-protein YP_001381441.1 KEGG: ade:Adeh_4120 hypothetical protein YP_001381443.1 KEGG: nfa:nfa6330 hypothetical protein YP_001381444.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: ade:Adeh_4139 uncharacterized protein linocin/CFP29 YP_001381445.1 KEGG: ade:Adeh_4140 hypothetical protein YP_001381446.1 PFAM: SNARE associated Golgi protein; KEGG: ade:Adeh_4141 DedA YP_001381447.1 PFAM: response regulator receiver; KEGG: ade:Adeh_4142 response regulator receiver domain protein (CheY-like) YP_001381448.1 KEGG: ade:Adeh_4143 exporters of the RND superfamily YP_001381449.1 PFAM: metallophosphoesterase; KEGG: ade:Adeh_4144 metallophosphoesterase YP_001381450.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_4145 phospholipid/glycerol acyltransferase YP_001381451.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_4146 phospholipid/glycerol acyltransferase YP_001381452.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_4147 phosphatidyl-myo-inositol alpha-mannosyltransferase YP_001381453.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: ade:Adeh_4149 inositol-3-phosphate synthase YP_001381454.1 KEGG: mxa:MXAN_6208 hypothetical protein YP_001381455.1 KEGG: ade:Adeh_4152 hypothetical protein YP_001381456.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_4153 outer membrane efflux protein YP_001381457.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ade:Adeh_4154 secretion protein HlyD YP_001381458.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_4155 ABC transporter, ATPase subunit YP_001381459.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_4156 ABC transporter, inner membrane subunit YP_001381460.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_4157 ABC transporter, inner membrane subunit YP_001381461.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: ade:Adeh_4158 peptidase S26A, signal peptidase I YP_001381462.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mlo:mll5391 hypothetical protein YP_001381463.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_001381464.1 PFAM: Silent information regulator protein Sir2; KEGG: gme:Gmet_0397 silent information regulator protein Sir2 YP_001381465.1 KEGG: ade:Adeh_2050 hypothetical protein YP_001381467.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: ade:Adeh_4161 peptidase M52, hydrogen uptake protein YP_001381468.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: ade:Adeh_4162 nickel-dependent hydrogenase, large subunit YP_001381469.1 PFAM: methyl-viologen-reducing hydrogenase delta subunit; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ade:Adeh_4163 methyl-viologen-reducing hydrogenase, delta subunit YP_001381470.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_4164 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001381472.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ade:Adeh_4165 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001381473.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ade:Adeh_4166 sigma 54 modulation protein/ribosomal protein S30EA YP_001381474.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: ade:Adeh_4167 sigma-54 (RpoN) YP_001381475.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_4168 ABC transporter, ATPase subunit YP_001381476.1 PFAM: OstA family protein; KEGG: ade:Adeh_4169 hypothetical protein YP_001381477.1 KEGG: ade:Adeh_4170 hypothetical protein YP_001381478.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: ade:Adeh_4172 phosphatase KdsC YP_001381479.1 KEGG: ecc:c1673 hypothetical protein YP_001381480.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001381481.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; KEGG: ade:Adeh_4175 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_001381482.1 KEGG: ade:Adeh_3734 hypothetical protein YP_001381483.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: ade:Adeh_4177 pseudouridine synthase, RluD YP_001381484.1 KEGG: ade:Adeh_4178 hypothetical protein YP_001381485.1 PFAM: aminotransferase class I and II; KEGG: fal:FRAAL4323 putative aminotransferase YP_001381486.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: ade:Adeh_2166 phospholipid/glycerol acyltransferase YP_001381487.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ade:Adeh_4179 tRNA/rRNA methyltransferase, SpoU YP_001381488.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_001381489.1 involved in the peptidyltransferase reaction during translation YP_001381490.1 PFAM: ribosomal protein L21; KEGG: ade:Adeh_4182 ribosomal protein L21 YP_001381491.1 KEGG: ade:Adeh_4183 hypothetical protein YP_001381492.1 PFAM: beta-lactamase domain protein; KEGG: gvi:glr4158 hypothetical protein YP_001381493.1 KEGG: aha:AHA_0223 putative lipoprotein YP_001381494.1 PFAM: protein of unknown function DUF1232; KEGG: ade:Adeh_4184 protein of unknown function DUF1232 YP_001381495.1 PFAM: K channel inward rectifier conserved region 2 domain protein; KEGG: ade:Adeh_4185 K+ channel, inward rectifier YP_001381496.1 TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; KEGG: ade:Adeh_4186 methylthioribose-1-phosphate isomerase YP_001381498.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001381499.1 KEGG: ade:Adeh_0550 hypothetical protein YP_001381500.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001381501.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: ade:Adeh_4189 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_001381502.1 KEGG: ade:Adeh_4190 hypothetical protein YP_001381503.1 TIGRFAM: MJ0042 family finger-like protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_4191 zinc finger/thioredoxin putative YP_001381504.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: ade:Adeh_4192 cell division FtsK/SpoIIIE YP_001381505.1 PFAM: protein of unknown function DUF205; KEGG: ade:Adeh_4194 protein of unknown function DUF205 YP_001381506.1 KEGG: ade:Adeh_4195 hypothetical protein YP_001381507.1 KEGG: ade:Adeh_4196 hypothetical protein YP_001381508.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ade:Adeh_4197 NADH-ubiquinone oxidoreductase, chain 4L YP_001381509.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ade:Adeh_4198 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_001381510.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: ade:Adeh_4199 NADH-quinone oxidoreductase, F subunit YP_001381511.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: ade:Adeh_4200 NADH-quinone oxidoreductase, E subunit YP_001381512.1 PFAM: response regulator receiver; type IV pilus assembly PilZ; KEGG: ade:Adeh_4201 response regulator receiver domain protein (CheY-like) YP_001381513.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_4202 GCN5-related N-acetyltransferase YP_001381514.1 PFAM: histone family protein DNA-binding protein; KEGG: ade:Adeh_4203 histone-like DNA-binding protein YP_001381515.1 KEGG: ade:Adeh_4204 hypothetical protein YP_001381516.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_001381517.1 KEGG: ade:Adeh_4207 hypothetical protein YP_001381518.1 PFAM: thioesterase superfamily protein; KEGG: ade:Adeh_4208 thioesterase-like YP_001381519.1 KEGG: ade:Adeh_4209 hypothetical protein YP_001381520.1 KEGG: ade:Adeh_4210 hypothetical protein YP_001381521.1 KEGG: ade:Adeh_4211 hypothetical protein YP_001381522.1 KEGG: ade:Adeh_4212 hypothetical protein YP_001381523.1 PFAM: response regulator receiver; type IV pilus assembly PilZ; KEGG: ade:Adeh_4213 response regulator receiver domain protein (CheY-like) YP_001381524.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001381525.1 KEGG: pgi:PG1005 lipoprotein, putative YP_001381526.1 KEGG: ade:Adeh_4215 hypothetical protein YP_001381527.1 KEGG: mxa:MXAN_0347 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001381528.1 KEGG: ade:Adeh_4216 superfamily I DNA and RNA helicase YP_001381529.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_4217 multi-sensor hybrid histidine kinase YP_001381530.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: ade:Adeh_4218 phosphoesterase, PA-phosphatase related YP_001381531.1 PFAM: Smr protein/MutS2; KEGG: ade:Adeh_4219 Smr protein/MutS2-like YP_001381532.1 PFAM: phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; KEGG: ade:Adeh_4220 threonyl/alanyl tRNA synthetase, SAD YP_001381533.1 TIGRFAM: ribosomal subunit interface protein; KEGG: ade:Adeh_4221 putative sigma 54 modulation protein/ribosomal protein S30EA YP_001381534.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_4222 signal transduction histidine kinase, nitrogen specific, NtrB YP_001381535.1 KEGG: ade:Adeh_4223 hypothetical protein YP_001381536.1 KEGG: ade:Adeh_4224 hypothetical protein YP_001381537.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_4225 histidine kinase YP_001381538.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_4226 periplasmic sensor signal transduction histidine kinase YP_001381539.1 PFAM: protein of unknown function DUF47; KEGG: ade:Adeh_4227 protein of unknown function DUF47 YP_001381540.1 PFAM: phosphate transporter; KEGG: ade:Adeh_4228 phosphate transporter YP_001381541.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_001381542.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: ade:Adeh_4231 DNA-3-methyladenine glycosylase YP_001381543.1 KEGG: ade:Adeh_4232 hypothetical protein YP_001381544.1 KEGG: ade:Adeh_4233 hypothetical protein YP_001381545.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; KEGG: ade:Adeh_4234 pyruvate kinase YP_001381546.1 PFAM: peptidase M24; KEGG: ade:Adeh_4235 peptidase M24 YP_001381547.1 PFAM: NUDIX hydrolase; beta-lactamase domain protein; KEGG: ade:Adeh_4236 beta-lactamase-like YP_001381548.1 KEGG: ade:Adeh_4237 hypothetical protein YP_001381549.1 KEGG: ade:Adeh_4238 hypothetical protein YP_001381550.1 KEGG: ade:Adeh_4239 hypothetical protein YP_001381551.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_4240 two component, sigma54 specific, transcriptional regulator, fis family YP_001381552.1 KEGG: ade:Adeh_4241 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase YP_001381553.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: ade:Adeh_4242 phospholipase D/transphosphatidylase YP_001381554.1 PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_1900 hypothetical protein YP_001381555.1 KEGG: ade:Adeh_4244 membrane protein YP_001381556.1 KEGG: ade:Adeh_4245 hypothetical protein YP_001381557.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_4246 periplasmic sensor signal transduction histidine kinase YP_001381558.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: ade:Adeh_4247 alpha/beta hydrolase fold-1 YP_001381559.1 PFAM: nitrogen regulatory protein P-II; KEGG: ade:Adeh_4248 nitrogen regulatory protein P-II (GlnB, GlnK) YP_001381560.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_4249 histidine kinase YP_001381561.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_4250 two component, sigma54 specific, transcriptional regulator, fis family YP_001381562.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: ade:Adeh_4252 glutamine synthetase, type I YP_001381563.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_4255 major facilitator superfamily MFS_1 transporter YP_001381564.1 KEGG: ade:Adeh_4256 hypothetical protein YP_001381565.1 KEGG: sth:STH1143 sulfate adenylyltransferase YP_001381566.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_0211 oxidoreductase, short chain dehydrogenase/reductase family YP_001381567.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bte:BTH_I2527 major facilitator family transporter YP_001381568.1 KEGG: mva:Mvan_1509 conserved hypothetical protein YP_001381570.1 PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: fal:FRAAL3705 putative RNA polymerase ECF-subfamily sigma factor YP_001381571.1 KEGG: ade:Adeh_0244 LigA YP_001381572.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: reh:H16_A2247 ABC-type transporter, periplasmic component: SulT family YP_001381573.1 PFAM: phosphate-selective porin O and P; KEGG: ade:Adeh_0319 phosphate-selective porin O and P YP_001381574.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_4257 ABC branched-chain amino acid transporter, ATPase subunit YP_001381575.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_4258 ABC branched-chain amino acid transporter, ATPase subunit YP_001381576.1 PFAM: inner-membrane translocator; KEGG: ade:Adeh_4259 ABC branched-chain amino acid transporter, inner membrane subunit YP_001381577.1 PFAM: inner-membrane translocator; KEGG: ade:Adeh_4260 ABC branched-chain amino acid transporter, inner membrane subunit YP_001381578.1 PFAM: Extracellular ligand-binding receptor; KEGG: ade:Adeh_4261 ABC branched chain amino acid transporter, periplasmic ligand binding protein YP_001381579.1 PFAM: response regulator receiver; KEGG: ade:Adeh_4262 response regulator receiver domain protein (CheY-like) YP_001381580.1 KEGG: ade:Adeh_4263 hypothetical protein YP_001381581.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ade:Adeh_4264 glycoside hydrolase, family 3-like YP_001381582.1 TIGRFAM: conserved hypothetical membrane protein; PFAM: protein of unknown function DUF1550; KEGG: ade:Adeh_4265 conserved hypothetical protein, double-transmembrane region YP_001381583.1 PFAM: protein of unknown function DUF58; KEGG: ade:Adeh_4266 protein of unknown function DUF58 YP_001381584.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: ade:Adeh_4268 ATPase associated with various cellular activities, AAA-3 YP_001381585.1 KEGG: ade:Adeh_4269 hypothetical protein YP_001381586.1 KEGG: ade:Adeh_4270 hypothetical protein YP_001381587.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ade:Adeh_4271 sigma-24 (FecI-like) YP_001381588.1 KEGG: ade:Adeh_4272 putative transmembrane transcriptional regulator (anti-sigma factor) YP_001381589.1 KEGG: ade:Adeh_4273 hypothetical protein YP_001381590.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ade:Adeh_4274 tyrosine kinase YP_001381591.1 PFAM: polysaccharide export protein; KEGG: ade:Adeh_4275 polysaccharide export protein YP_001381592.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: ade:Adeh_4276 tyrosine phosphatase YP_001381593.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_1097 efflux ABC transporter, permease/ATP-binding protein YP_001381594.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: ade:Adeh_3155 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like YP_001381595.1 PFAM: glycosyl transferase family 4; KEGG: ade:Adeh_4277 glycosyl transferase, family 4 YP_001381596.1 PFAM: glycosyl transferase group 1; KEGG: mca:MCA1168 colanic acid biosynthesis glycosyl transferase, putative YP_001381597.1 PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_0790 glycosyl transferase, group 1 YP_001381598.1 PFAM: glycosyl transferase group 1; KEGG: mma:MM2106 putative glycosyltransferase YP_001381599.1 PFAM: O-antigen polymerase; KEGG: bpa:BPP3473 hypothetical protein YP_001381600.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: fal:FRAAL2039 hypothetical protein; putative membrane protein YP_001381602.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: ade:Adeh_4286 NAD-dependent epimerase/dehydratase YP_001381603.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: ade:Adeh_4287 GDP-mannose 4,6-dehydratase YP_001381604.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ade:Adeh_1738 HNH nuclease YP_001381605.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ade:Adeh_4288 dTDP-glucose 4,6-dehydratase YP_001381606.1 PFAM: glycosyl transferase family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_4293 glycosyl transferase, family 2 YP_001381607.1 KEGG: aba:Acid345_0601 hypothetical protein YP_001381608.1 KEGG: ade:Adeh_4304 hypothetical protein YP_001381609.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; Ketopantoate reductase ApbA/PanE domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: ade:Adeh_4305 UDP-glucose 6-dehydrogenase YP_001381610.1 PFAM: glycosyl transferase family 2; KEGG: fth:FTH_1558 glycosyl transferase, group 2 family protein YP_001381611.1 KEGG: ter:Tery_1348 methyltransferase type 11 YP_001381612.1 KEGG: nca:Noca_2061 hypothetical protein YP_001381613.1 PFAM: peptidase S16 lon domain protein; KEGG: ade:Adeh_4306 peptidase S16, lon-like YP_001381614.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_001381615.1 KEGG: ade:Adeh_4308 adventurous gliding motility protein S YP_001381616.1 KEGG: ade:Adeh_4309 TolR protein YP_001381617.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ade:Adeh_4310 MotA/TolQ/ExbB proton channel YP_001381618.1 KEGG: ade:Adeh_4311 hypothetical protein YP_001381619.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GAF domain protein; KEGG: ade:Adeh_4312 PAS/PAC sensor signal transduction histidine kinase YP_001381620.1 PFAM: protein of unknown function DUF111; KEGG: ade:Adeh_4313 protein of unknown function DUF111 YP_001381621.1 KEGG: ade:Adeh_4314 hypothetical protein YP_001381622.1 PFAM: CheC domain protein; KEGG: ade:Adeh_4315 CheC, inhibitor of MCP methylation YP_001381623.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: ade:Adeh_4316 CheA signal transduction histidine kinase YP_001381624.1 PFAM: response regulator receiver; KEGG: ade:Adeh_4317 response regulator receiver domain protein (CheY-like) YP_001381625.1 PFAM: CheW domain protein; KEGG: ade:Adeh_4318 CheW protein YP_001381626.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ade:Adeh_4319 methyl-accepting chemotaxis sensory transducer YP_001381627.1 TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; KEGG: ade:Adeh_4320 thiamine-monophosphate kinase YP_001381628.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_4321 histidine kinase YP_001381629.1 KEGG: ade:Adeh_4322 MglA protein YP_001381630.1 SMART: helicase c2; KEGG: ade:Adeh_4323 helicase C2 YP_001381631.1 KEGG: ade:Adeh_4324 hypothetical protein YP_001381632.1 PFAM: peptidase M50; KEGG: ade:Adeh_4325 peptidase M50 YP_001381633.1 PFAM: Tetratricopeptide TPR_4; KEGG: sus:Acid_5472 tetratricopeptide TPR_2 repeat protein YP_001381634.1 KEGG: ade:Adeh_4326 ABC branched chain amino acid transporter, periplasmic ligand binding protein YP_001381635.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: ade:Adeh_4327 chaperone DnaJ YP_001381636.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_001381637.1 PFAM: GrpE protein; KEGG: ade:Adeh_4329 GrpE protein YP_001381638.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: ade:Adeh_4330 negative regulator of class I heat shock protein YP_001381639.1 PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_4331 tetratricopeptide repeat protein YP_001381640.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_4332 transcription-repair coupling factor YP_001381641.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ade:Adeh_4333 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001381642.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: ade:Adeh_4334 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001381643.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: ade:Adeh_4335 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001381644.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; KEGG: ade:Adeh_4336 4-hydroxythreonine-4-phosphate dehydrogenase YP_001381645.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: ade:Adeh_4218 phosphoesterase, PA-phosphatase related YP_001381646.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_001381647.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: ade:Adeh_4338 ATP synthase F0, B subunit YP_001381648.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: ade:Adeh_4339 ATP synthase F0, C subunit YP_001381649.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0 YP_001381650.1 KEGG: ade:Adeh_4341 hypothetical protein YP_001381651.1 KEGG: ade:Adeh_4342 hypothetical protein YP_001381652.1 PFAM: aminotransferase class V; KEGG: ade:Adeh_4343 selenocysteine lyase YP_001381653.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_001381654.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_4345 hypothetical protein YP_001381655.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: ade:Adeh_4346 DNA gyrase, A subunit YP_001381656.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex YP_001381657.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001381658.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit YP_001381659.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_001381660.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_001381661.1 PFAM: heat shock protein Hsp20; KEGG: ade:Adeh_4352 heat shock protein HSP20 YP_001381662.1 PFAM: protein of unknown function DUF583; KEGG: ade:Adeh_4353 protein of unknown function DUF583 YP_001381663.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ade:Adeh_4354 ParB-like partition proteins YP_001381664.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ade:Adeh_4355 cobyrinic acid a,c-diamide synthase YP_001381665.1 PFAM: GYD family protein; KEGG: mes:Meso_1466 hypothetical protein YP_001381666.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase small; KEGG: ade:Adeh_4356 methyltransferase GidB YP_001381667.1 PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: ade:Adeh_4357 spoIIIJ-associated protein YP_001381668.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: ade:Adeh_4358 60 kDa inner membrane insertion protein YP_001381669.1 PFAM: protein of unknown function DUF37; KEGG: ade:Adeh_4359 protein of unknown function DUF37 YP_001381670.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: ade:Adeh_4360 ribonuclease P protein component