-- dump date 20140618_200526 -- class Genbank::CDS -- table cds_note -- id note YP_008194432.1 COG0593 ATPase involved in DNA replication initiation YP_008194433.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_008194434.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_008194435.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008194436.1 COG0430 RNA 3'-terminal phosphate cyclase YP_008194437.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_008194438.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_008194439.1 COG2818 3-methyladenine DNA glycosylase YP_008194441.1 COG3078 Uncharacterized protein conserved in bacteria YP_008194442.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008194443.1 COG2863 Cytochrome c553 YP_008194444.1 COG0218 Predicted GTPase YP_008194445.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_008194446.1 COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis YP_008194447.1 COG0168 Trk-type K+ transport systems, membrane components YP_008194448.1 COG0569 K+ transport systems, NAD-binding component YP_008194449.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_008194450.1 COG0223 Methionyl-tRNA formyltransferase YP_008194451.1 COG0242 N-formylmethionyl-tRNA deformylase YP_008194452.1 COG1652 Uncharacterized protein containing LysM domain YP_008194453.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_008194454.1 COG2922 Uncharacterized protein conserved in bacteria YP_008194455.1 COG0551 Zn-finger domain associated with topoisomerase type I YP_008194456.1 COG0009 Putative translation factor (SUA5) YP_008194457.1 COG0408 Coproporphyrinogen III oxidase YP_008194458.1 COG3047 Outer membrane protein W YP_008194459.1 COG2346 Truncated hemoglobins YP_008194460.1 COG0169 Shikimate 5-dehydrogenase YP_008194461.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_008194462.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_008194465.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008194466.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008194468.1 COG0587 DNA polymerase III, alpha subunit YP_008194469.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008194470.1 COG1066 Predicted ATP-dependent serine protease YP_008194472.1 COG4805 Uncharacterized protein conserved in bacteria YP_008194473.1 COG4517 Uncharacterized protein conserved in bacteria YP_008194474.1 COG2234 Predicted aminopeptidases YP_008194475.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008194476.1 COG1309 Transcriptional regulator YP_008194477.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_008194478.1 COG2003 DNA repair proteins YP_008194483.1 COG0227 Ribosomal protein L28 YP_008194484.1 COG0267 Ribosomal protein L33 YP_008194486.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_008194487.1 COG0669 Phosphopantetheine adenylyltransferase YP_008194488.1 COG0515 Serine/threonine protein kinase YP_008194489.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008194490.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008194491.1 COG0362 6-phosphogluconate dehydrogenase YP_008194492.1 COG2199 FOG: GGDEF domain YP_008194493.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_008194494.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_008194495.1 COG0607 Rhodanese-related sulfurtransferase YP_008194496.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008194497.1 COG1580 Flagellar basal body-associated protein YP_008194498.1 COG3161 4-hydroxybenzoate synthetase (chorismate lyase) YP_008194499.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_008194500.1 COG4737 Uncharacterized protein conserved in bacteria YP_008194501.1 COG2944 Predicted transcriptional regulator YP_008194502.1 COG2960 Uncharacterized protein conserved in bacteria YP_008194503.1 COG0210 Superfamily I DNA and RNA helicases YP_008194504.1 COG2199 FOG: GGDEF domain YP_008194505.1 COG3245 Cytochrome c5 YP_008194506.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008194507.1 COG1396 Predicted transcriptional regulators YP_008194509.1 COG1757 Na+/H+ antiporter YP_008194510.1 COG2391 Predicted transporter component YP_008194511.1 COG2391 Predicted transporter component YP_008194512.1 COG1959 Predicted transcriptional regulator YP_008194513.1 COG0730 Predicted permeases YP_008194514.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008194515.1 COG3453 Uncharacterized protein conserved in bacteria YP_008194516.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008194519.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_008194520.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_008194521.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008194522.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008194524.1 COG0607 Rhodanese-related sulfurtransferase YP_008194525.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008194526.1 COG0450 Peroxiredoxin YP_008194528.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_008194529.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008194530.1 COG1538 Outer membrane protein YP_008194531.1 COG0845 Membrane-fusion protein YP_008194532.1 COG3696 Putative silver efflux pump YP_008194534.1 COG1292 Choline-glycine betaine transporter YP_008194538.1 COG3886 Predicted HKD family nuclease YP_008194539.1 COG0500 SAM-dependent methyltransferases YP_008194540.1 COG0845 Membrane-fusion protein YP_008194541.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008194542.1 COG0842 ABC-type multidrug transport system, permease component YP_008194543.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008194545.1 COG1960 Acyl-CoA dehydrogenases YP_008194546.1 COG0583 Transcriptional regulator YP_008194547.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008194548.1 COG3106 Predicted ATPase YP_008194549.1 COG3768 Predicted membrane protein YP_008194550.1 COG2966 Uncharacterized conserved protein YP_008194552.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_008194553.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_008194554.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_008194555.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008194556.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_008194557.1 COG0422 Thiamine biosynthesis protein ThiC YP_008194558.1 COG3071 Uncharacterized enzyme of heme biosynthesis YP_008194559.1 COG2959 Uncharacterized enzyme of heme biosynthesis YP_008194560.1 COG1587 Uroporphyrinogen-III synthase YP_008194561.1 COG0181 Porphobilinogen deaminase YP_008194562.1 COG2199 FOG: GGDEF domain YP_008194564.1 COG0400 Predicted esterase YP_008194565.1 COG0194 Guanylate kinase YP_008194566.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_008194567.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008194568.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008194569.1 COG0566 rRNA methylases YP_008194570.1 COG1200 RecG-like helicase YP_008194571.1 COG0500 SAM-dependent methyltransferases YP_008194572.1 COG0678 Peroxiredoxin YP_008194573.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_008194574.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_008194575.1 COG1178 ABC-type Fe3+ transport system, permease component YP_008194576.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008194577.1 COG0668 Small-conductance mechanosensitive channel YP_008194578.1 COG2081 Predicted flavoproteins YP_008194579.1 COG2801 Transposase and inactivated derivatives YP_008194581.1 COG2801 Transposase and inactivated derivatives YP_008194584.1 COG2214 DnaJ-class molecular chaperone YP_008194585.1 COG0845 Membrane-fusion protein YP_008194586.1 COG0841 Cation/multidrug efflux pump YP_008194587.1 COG3150 Predicted esterase YP_008194588.1 COG0427 Acetyl-CoA hydrolase YP_008194589.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_008194590.1 COG0695 Glutaredoxin and related proteins YP_008194592.1 COG0840 Methyl-accepting chemotaxis protein YP_008194593.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008194595.1 COG0807 GTP cyclohydrolase II YP_008194596.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008194598.1 COG0625 Glutathione S-transferase YP_008194599.1 COG0514 Superfamily II DNA helicase YP_008194600.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_008194601.1 COG2962 Predicted permeases YP_008194602.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008194603.1 COG0210 Superfamily I DNA and RNA helicases YP_008194604.1 COG1045 Serine acetyltransferase YP_008194605.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008194606.1 COG4973 Site-specific recombinase XerC YP_008194607.1 COG3159 Uncharacterized protein conserved in bacteria YP_008194608.1 COG0253 Diaminopimelate epimerase YP_008194609.1 COG0019 Diaminopimelate decarboxylase YP_008194611.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_008194612.1 COG0671 Membrane-associated phospholipid phosphatase YP_008194613.1 COG0684 Demethylmenaquinone methyltransferase YP_008194614.1 COG3293 Transposase and inactivated derivatives YP_008194615.1 COG4421 Capsular polysaccharide biosynthesis protein YP_008194616.1 COG3866 Pectate lyase YP_008194618.1 COG1835 Predicted acyltransferases YP_008194619.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008194620.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_008194621.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_008194622.1 COG0158 Fructose-1,6-bisphosphatase YP_008194624.1 COG0221 Inorganic pyrophosphatase YP_008194625.1 COG3495 Uncharacterized protein conserved in bacteria YP_008194627.1 COG0824 Predicted thioesterase YP_008194628.1 COG0443 Molecular chaperone YP_008194630.1 COG0178 Excinuclease ATPase subunit YP_008194631.1 COG1609 Transcriptional regulators YP_008194632.1 COG2017 Galactose mutarotase and related enzymes YP_008194633.1 COG1085 Galactose-1-phosphate uridylyltransferase YP_008194634.1 COG0153 Galactokinase YP_008194635.1 COG4146 Predicted symporter YP_008194636.1 COG0629 Single-stranded DNA-binding protein YP_008194638.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_008194639.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008194641.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008194643.1 COG0554 Glycerol kinase YP_008194644.1 COG1349 Transcriptional regulators of sugar metabolism YP_008194645.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_008194652.1 COG1450 Type II secretory pathway, component PulD YP_008194653.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008194654.1 COG0457 FOG: TPR repeat YP_008194655.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008194656.1 COG1459 Type II secretory pathway, component PulF YP_008194661.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008194665.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_008194666.1 COG1792 Cell shape-determining protein YP_008194667.1 COG2891 Cell shape-determining protein YP_008194668.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_008194669.1 COG1530 Ribonucleases G and E YP_008194670.1 COG3164 Predicted membrane protein YP_008194671.1 COG0388 Predicted amidohydrolase YP_008194672.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008194673.1 COG3028 Uncharacterized protein conserved in bacteria YP_008194674.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008194675.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008194676.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008194677.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008194678.1 COG0642 Signal transduction histidine kinase YP_008194679.1 COG0297 Glycogen synthase YP_008194680.1 COG2813 16S RNA G1207 methylase RsmC YP_008194681.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_008194682.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008194683.1 COG1194 A/G-specific DNA glycosylase YP_008194684.1 COG2924 Fe-S cluster protector protein YP_008194685.1 COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_008194686.1 COG1483 Predicted ATPase (AAA+ superfamily) YP_008194687.1 COG1743 Adenine-specific DNA methylase containing a Zn-ribbon YP_008194688.1 COG2826 Transposase and inactivated derivatives, IS30 family YP_008194689.1 COG1145 Ferredoxin YP_008194690.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008194691.1 COG2801 Transposase and inactivated derivatives YP_008194692.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008194695.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_008194696.1 COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin YP_008194697.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194698.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194699.1 COG5310 Homospermidine synthase YP_008194700.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008194701.1 COG2366 Protein related to penicillin acylase YP_008194702.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194703.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_008194704.1 COG3251 Uncharacterized protein conserved in bacteria YP_008194705.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194707.1 COG0013 Alanyl-tRNA synthetase YP_008194708.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194709.1 COG2175 Probable taurine catabolism dioxygenase YP_008194710.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194711.1 COG3321 Polyketide synthase modules and related proteins YP_008194712.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194713.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194715.1 COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_008194717.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194718.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008194719.1 COG0346 Lactoylglutathione lyase and related lyases YP_008194721.1 COG2977 Phosphopantetheinyl transferase component of siderophore synthetase YP_008194724.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008194725.1 COG2801 Transposase and inactivated derivatives YP_008194731.1 COG1538 Outer membrane protein YP_008194732.1 COG0845 Membrane-fusion protein YP_008194733.1 COG3696 Putative silver efflux pump YP_008194734.1 COG1230 Co/Zn/Cd efflux system component YP_008194736.1 COG0818 Diacylglycerol kinase YP_008194737.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_008194738.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_008194739.1 COG0398 Uncharacterized conserved protein YP_008194740.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008194741.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008194742.1 COG0642 Signal transduction histidine kinase YP_008194743.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008194746.1 COG3696 Putative silver efflux pump YP_008194747.1 COG0845 Membrane-fusion protein YP_008194748.1 COG1538 Outer membrane protein YP_008194749.1 COG0501 Zn-dependent protease with chaperone function YP_008194750.1 COG3682 Predicted transcriptional regulator YP_008194751.1 COG0582 Integrase YP_008194752.1 COG3019 Predicted metal-binding protein YP_008194753.1 COG0223 Methionyl-tRNA formyltransferase YP_008194754.1 COG0642 Signal transduction histidine kinase YP_008194755.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008194757.1 COG3019 Predicted metal-binding protein YP_008194758.1 COG1538 Outer membrane protein YP_008194759.1 COG0845 Membrane-fusion protein YP_008194760.1 COG3696 Putative silver efflux pump YP_008194763.1 COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC YP_008194764.1 COG1276 Putative copper export protein YP_008194766.1 COG4319 Ketosteroid isomerase homolog YP_008194767.1 COG3503 Predicted membrane protein YP_008194769.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008194771.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_008194772.1 COG2857 Cytochrome c1 YP_008194776.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_008194780.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_008194782.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_008194783.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_008194785.1 COG0298 Hydrogenase maturation factor YP_008194786.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_008194787.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_008194788.1 COG0409 Hydrogenase maturation factor YP_008194789.1 COG0068 Hydrogenase maturation factor YP_008194790.1 COG0309 Hydrogenase maturation factor YP_008194791.1 COG0789 Predicted transcriptional regulators YP_008194792.1 COG2217 Cation transport ATPase YP_008194793.1 COG4633 Uncharacterized protein conserved in bacteria YP_008194795.1 COG2020 Putative protein-S-isoprenylcysteine methyltransferase YP_008194799.1 COG2801 Transposase and inactivated derivatives YP_008194803.1 COG3436 Transposase and inactivated derivatives YP_008194804.1 COG2963 Transposase and inactivated derivatives YP_008194805.1 COG3436 Transposase and inactivated derivatives YP_008194807.1 COG0531 Amino acid transporters YP_008194808.1 COG3667 Uncharacterized protein involved in copper resistance YP_008194809.1 COG2132 Putative multicopper oxidases YP_008194810.1 COG0695 Glutaredoxin and related proteins YP_008194811.1 COG3544 Uncharacterized protein conserved in bacteria YP_008194813.1 COG0582 Integrase YP_008194814.1 COG0840 Methyl-accepting chemotaxis protein YP_008194815.1 COG0784 FOG: CheY-like receiver YP_008194816.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008194817.1 COG0835 Chemotaxis signal transduction protein YP_008194818.1 COG2202 FOG: PAS/PAC domain YP_008194819.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008194820.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_008194821.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008194822.1 COG0840 Methyl-accepting chemotaxis protein YP_008194823.1 COG0784 FOG: CheY-like receiver YP_008194824.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008194825.1 COG0835 Chemotaxis signal transduction protein YP_008194826.1 COG2202 FOG: PAS/PAC domain YP_008194827.1 COG2202 FOG: PAS/PAC domain YP_008194828.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008194829.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_008194830.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008194832.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008194833.1 COG2199 FOG: GGDEF domain YP_008194834.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008194835.1 COG0546 Predicted phosphatases YP_008194837.1 COG0642 Signal transduction histidine kinase YP_008194839.1 COG1082 Sugar phosphate isomerases/epimerases YP_008194840.1 COG1609 Transcriptional regulators YP_008194841.1 COG0673 Predicted dehydrogenases and related proteins YP_008194842.1 COG1082 Sugar phosphate isomerases/epimerases YP_008194843.1 COG0477 Permeases of the major facilitator superfamily YP_008194844.1 COG3622 Hydroxypyruvate isomerase YP_008194845.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008194846.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008194848.1 COG1454 Alcohol dehydrogenase, class IV YP_008194849.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008194850.1 COG0588 Phosphoglycerate mutase 1 YP_008194851.1 COG3542 Uncharacterized conserved protein YP_008194852.1 COG1048 Aconitase A YP_008194853.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008194854.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008194855.1 COG0051 Ribosomal protein S10 YP_008194856.1 COG0087 Ribosomal protein L3 YP_008194857.1 COG0088 Ribosomal protein L4 YP_008194858.1 COG0089 Ribosomal protein L23 YP_008194859.1 COG0090 Ribosomal protein L2 YP_008194860.1 COG0185 Ribosomal protein S19 YP_008194861.1 COG0091 Ribosomal protein L22 YP_008194862.1 COG0092 Ribosomal protein S3 YP_008194863.1 COG0197 Ribosomal protein L16/L10E YP_008194864.1 COG0255 Ribosomal protein L29 YP_008194865.1 COG0186 Ribosomal protein S17 YP_008194866.1 COG0438 Glycosyltransferase YP_008194867.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008194868.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_008194869.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_008194872.1 COG0840 Methyl-accepting chemotaxis protein YP_008194873.1 COG0339 Zn-dependent oligopeptidases YP_008194875.1 COG0788 Formyltetrahydrofolate hydrolase YP_008194876.1 COG1514 2'-5' RNA ligase YP_008194877.1 COG1643 HrpA-like helicases YP_008194878.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008194879.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_008194882.1 COG2354 Uncharacterized protein conserved in bacteria YP_008194883.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008194885.1 COG0347 Nitrogen regulatory protein PII YP_008194886.1 COG0004 Ammonia permease YP_008194887.1 COG0405 Gamma-glutamyltransferase YP_008194888.1 COG2837 Predicted iron-dependent peroxidase YP_008194889.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_008194890.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_008194891.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_008194892.1 COG1309 Transcriptional regulator YP_008194893.1 COG0845 Membrane-fusion protein YP_008194894.1 COG0841 Cation/multidrug efflux pump YP_008194896.1 COG0642 Signal transduction histidine kinase YP_008194897.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008194900.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008194901.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit YP_008194902.1 COG4992 Ornithine/acetylornithine aminotransferase YP_008194904.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_008194905.1 COG0180 Tryptophanyl-tRNA synthetase YP_008194906.1 COG0036 Pentose-5-phosphate-3-epimerase YP_008194910.1 COG0338 Site-specific DNA methylase YP_008194911.1 COG3266 Uncharacterized protein conserved in bacteria YP_008194912.1 COG0337 3-dehydroquinate synthetase YP_008194913.1 COG0703 Shikimate kinase YP_008194914.1 COG4796 Type II secretory pathway, component HofQ YP_008194915.1 COG3168 Tfp pilus assembly protein PilP YP_008194916.1 COG3167 Tfp pilus assembly protein PilO YP_008194917.1 COG3166 Tfp pilus assembly protein PilN YP_008194918.1 COG4972 Tfp pilus assembly protein, ATPase PilM YP_008194919.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_008194920.1 COG0281 Malic enzyme YP_008194923.1 COG0625 Glutathione S-transferase YP_008194925.1 COG0753 Catalase YP_008194926.1 COG1309 Transcriptional regulator YP_008194927.1 COG4757 Predicted alpha/beta hydrolase YP_008194928.1 COG2202 FOG: PAS/PAC domain YP_008194929.1 COG0548 Acetylglutamate kinase YP_008194930.1 COG0165 Argininosuccinate lyase YP_008194931.1 COG0137 Argininosuccinate synthase YP_008194932.1 COG0078 Ornithine carbamoyltransferase YP_008194933.1 COG0548 Acetylglutamate kinase YP_008194934.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_008194935.1 COG1803 Methylglyoxal synthase YP_008194937.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008194938.1 COG0642 Signal transduction histidine kinase YP_008194939.1 COG2267 Lysophospholipase YP_008194940.1 COG0219 Predicted rRNA methylase (SpoU class) YP_008194942.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_008194943.1 COG1952 Preprotein translocase subunit SecB YP_008194944.1 COG0695 Glutaredoxin and related proteins YP_008194945.1 COG0607 Rhodanese-related sulfurtransferase YP_008194946.1 COG4942 Membrane-bound metallopeptidase YP_008194947.1 COG2861 Uncharacterized protein conserved in bacteria YP_008194949.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_008194950.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008194951.1 COG0688 Phosphatidylserine decarboxylase YP_008194952.1 COG1162 Predicted GTPases YP_008194953.1 COG1949 Oligoribonuclease (3'->5' exoribonuclease) YP_008194954.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008194956.1 COG3085 Uncharacterized protein conserved in bacteria YP_008194957.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008194958.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_008194961.1 COG1826 Sec-independent protein secretion pathway components YP_008194962.1 COG1826 Sec-independent protein secretion pathway components YP_008194963.1 COG0805 Sec-independent protein secretion pathway component TatC YP_008194965.1 COG0084 Mg-dependent DNase YP_008194966.1 COG2199 FOG: GGDEF domain YP_008194967.1 COG0113 Delta-aminolevulinic acid dehydratase YP_008194968.1 COG0248 Exopolyphosphatase YP_008194969.1 COG0513 Superfamily II DNA and RNA helicases YP_008194970.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008194971.1 COG1158 Transcription termination factor YP_008194972.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_008194973.1 COG0642 Signal transduction histidine kinase YP_008194974.1 COG3004 Na+/H+ antiporter YP_008194975.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_008194976.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_008194977.1 COG2847 Uncharacterized protein conserved in bacteria YP_008194978.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_008194979.1 COG2133 Glucose/sorbosone dehydrogenases YP_008194980.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008194981.1 COG4323 Predicted membrane protein YP_008194982.1 COG3118 Thioredoxin domain-containing protein YP_008194984.1 COG0520 Selenocysteine lyase YP_008194985.1 COG3242 Uncharacterized protein conserved in bacteria YP_008194986.1 COG0104 Adenylosuccinate synthase YP_008194987.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008194988.1 COG3565 Predicted dioxygenase of extradiol dioxygenase family YP_008194989.1 COG1432 Uncharacterized conserved protein YP_008194990.1 COG0405 Gamma-glutamyltransferase YP_008194991.1 COG1757 Na+/H+ antiporter YP_008194992.1 COG1472 Beta-glucosidase-related glycosidases YP_008194993.1 COG0668 Small-conductance mechanosensitive channel YP_008194994.1 COG3876 Uncharacterized protein conserved in bacteria YP_008194995.1 COG2103 Predicted sugar phosphate isomerase YP_008194996.1 COG0787 Alanine racemase YP_008194997.1 COG1284 Uncharacterized conserved protein YP_008194999.1 COG0346 Lactoylglutathione lyase and related lyases YP_008195001.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008195002.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_008195004.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_008195005.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008195006.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008195007.1 COG1569 Predicted nucleic acid-binding protein, contains PIN domain YP_008195010.1 COG3093 Plasmid maintenance system antidote protein YP_008195011.1 COG3549 Plasmid maintenance system killer protein YP_008195012.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008195013.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008195016.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008195019.1 COG0833 Amino acid transporters YP_008195020.1 COG1814 Uncharacterized membrane protein YP_008195022.1 COG1733 Predicted transcriptional regulators YP_008195023.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008195024.1 COG5331 Uncharacterized protein conserved in bacteria YP_008195025.1 COG0582 Integrase YP_008195026.1 COG0183 Acetyl-CoA acetyltransferase YP_008195027.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008195028.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008195029.1 COG0006 Xaa-Pro aminopeptidase YP_008195030.1 COG0428 Predicted divalent heavy-metal cations transporter YP_008195031.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_008195032.1 COG0261 Ribosomal protein L21 YP_008195033.1 COG0211 Ribosomal protein L27 YP_008195034.1 COG0536 Predicted GTPase YP_008195035.1 COG0262 Dihydrofolate reductase YP_008195036.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008195037.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008195038.1 COG1238 Predicted membrane protein YP_008195039.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_008195040.1 COG0585 Uncharacterized conserved protein YP_008195041.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_008195042.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_008195043.1 COG2919 Septum formation initiator YP_008195045.1 COG0840 Methyl-accepting chemotaxis protein YP_008195047.1 COG0506 Proline dehydrogenase YP_008195048.1 COG0642 Signal transduction histidine kinase YP_008195049.1 COG3103 SH3 domain protein YP_008195050.1 COG3025 Uncharacterized conserved protein YP_008195051.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008195052.1 COG3066 DNA mismatch repair protein YP_008195053.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008195054.1 COG3605 Signal transduction protein containing GAF and PtsI domains YP_008195055.1 COG0730 Predicted permeases YP_008195056.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_008195057.1 COG0207 Thymidylate synthase YP_008195058.1 COG0784 FOG: CheY-like receiver YP_008195059.1 COG2199 FOG: GGDEF domain YP_008195060.1 COG0477 Permeases of the major facilitator superfamily YP_008195063.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008195064.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_008195066.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008195067.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_008195069.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_008195070.1 COG0513 Superfamily II DNA and RNA helicases YP_008195071.1 COG0457 FOG: TPR repeat YP_008195072.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008195074.1 COG1538 Outer membrane protein YP_008195075.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008195076.1 COG3151 Uncharacterized protein conserved in bacteria YP_008195077.1 COG1409 Predicted phosphohydrolases YP_008195078.1 COG3150 Predicted esterase YP_008195079.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008195081.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008195082.1 COG5544 Predicted periplasmic lipoprotein YP_008195086.1 COG1509 Lysine 2,3-aminomutase YP_008195087.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_008195088.1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) YP_008195089.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195091.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008195092.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195093.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_008195094.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008195095.1 COG2813 16S RNA G1207 methylase RsmC YP_008195096.1 COG3145 Alkylated DNA repair protein YP_008195097.1 COG0271 Stress-induced morphogen (activity unknown) YP_008195098.1 COG0671 Membrane-associated phospholipid phosphatase YP_008195099.1 COG3575 Uncharacterized protein conserved in bacteria YP_008195100.1 COG3707 Response regulator with putative antiterminator output domain YP_008195103.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008195104.1 COG1251 NAD(P)H-nitrite reductase YP_008195105.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_008195106.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008195107.1 COG0007 Uroporphyrinogen-III methylase YP_008195108.1 COG0547 Anthranilate phosphoribosyltransferase YP_008195109.1 COG2202 FOG: PAS/PAC domain YP_008195110.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_008195111.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_008195112.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_008195114.1 COG1896 Predicted hydrolases of HD superfamily YP_008195115.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008195116.1 COG4206 Outer membrane cobalamin receptor protein YP_008195117.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_008195118.1 COG0348 Polyferredoxin YP_008195120.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008195121.1 COG1960 Acyl-CoA dehydrogenases YP_008195122.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008195123.1 COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_008195124.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_008195125.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_008195126.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008195127.1 COG0845 Membrane-fusion protein YP_008195128.1 COG0841 Cation/multidrug efflux pump YP_008195131.1 COG0840 Methyl-accepting chemotaxis protein YP_008195132.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008195133.1 COG0358 DNA primase (bacterial type) YP_008195134.1 COG1610 Uncharacterized conserved protein YP_008195136.1 COG0828 Ribosomal protein S21 YP_008195137.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_008195138.1 COG1524 Uncharacterized proteins of the AP superfamily YP_008195139.1 COG0344 Predicted membrane protein YP_008195140.1 COG1539 Dihydroneopterin aldolase YP_008195141.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008195142.1 COG1968 Uncharacterized bacitracin resistance protein YP_008195143.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_008195145.1 COG1639 Predicted signal transduction protein YP_008195146.1 COG3135 Uncharacterized protein involved in benzoate metabolism YP_008195147.1 COG1396 Predicted transcriptional regulators YP_008195148.1 COG2974 DNA recombination-dependent growth factor C YP_008195149.1 COG0642 Signal transduction histidine kinase YP_008195150.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008195151.1 COG0642 Signal transduction histidine kinase YP_008195152.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008195154.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195156.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_008195157.1 COG0811 Biopolymer transport proteins YP_008195158.1 COG0848 Biopolymer transport protein YP_008195159.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008195160.1 COG0457 FOG: TPR repeat YP_008195161.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008195162.1 COG0642 Signal transduction histidine kinase YP_008195163.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008195164.1 COG0591 Na+/proline symporter YP_008195165.1 COG2133 Glucose/sorbosone dehydrogenases YP_008195166.1 COG1049 Aconitase B YP_008195168.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008195169.1 COG0775 Nucleoside phosphorylase YP_008195171.1 COG1793 ATP-dependent DNA ligase YP_008195172.1 COG1049 Aconitase B YP_008195173.1 COG1430 Uncharacterized conserved protein YP_008195174.1 COG0527 Aspartokinases YP_008195175.1 COG0840 Methyl-accepting chemotaxis protein YP_008195176.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_008195177.1 COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport YP_008195178.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_008195179.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_008195180.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008195181.1 COG1452 Organic solvent tolerance protein OstA YP_008195182.1 COG1076 DnaJ-domain-containing proteins 1 YP_008195183.1 COG4974 Site-specific recombinase XerD YP_008195184.1 COG1651 Protein-disulfide isomerase YP_008195185.1 COG0608 Single-stranded DNA-specific exonuclease YP_008195187.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_008195188.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_008195189.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_008195190.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008195191.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008195192.1 COG1694 Predicted pyrophosphatase YP_008195193.1 COG2832 Uncharacterized protein conserved in bacteria YP_008195194.1 COG1257 Hydroxymethylglutaryl-CoA reductase YP_008195195.1 COG0457 FOG: TPR repeat YP_008195197.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008195199.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008195201.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_008195202.1 COG0398 Uncharacterized conserved protein YP_008195203.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008195205.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_008195207.1 COG0642 Signal transduction histidine kinase YP_008195208.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008195210.1 COG0102 Ribosomal protein L13 YP_008195211.1 COG0103 Ribosomal protein S9 YP_008195212.1 COG0723 Rieske Fe-S protein YP_008195213.1 COG1290 Cytochrome b subunit of the bc complex YP_008195214.1 COG2857 Cytochrome c1 YP_008195215.1 COG0625 Glutathione S-transferase YP_008195216.1 COG2969 Stringent starvation protein B YP_008195217.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_008195218.1 COG1925 Phosphotransferase system, HPr-related proteins YP_008195219.1 COG1660 Predicted P-loop-containing kinase YP_008195220.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_008195221.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_008195222.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_008195223.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_008195224.1 COG1934 Uncharacterized protein conserved in bacteria YP_008195225.1 COG3117 Uncharacterized protein conserved in bacteria YP_008195226.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_008195227.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_008195228.1 COG0530 Ca2+/Na+ antiporter YP_008195229.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_008195230.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_008195231.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_008195232.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_008195233.1 COG3113 Predicted NTP binding protein (contains STAS domain) YP_008195234.1 COG5007 Predicted transcriptional regulator, BolA superfamily YP_008195235.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_008195236.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008195237.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008195239.1 COG1485 Predicted ATPase YP_008195240.1 COG0217 Uncharacterized conserved protein YP_008195241.1 COG2346 Truncated hemoglobins YP_008195244.1 COG0342 Preprotein translocase subunit SecD YP_008195245.1 COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain YP_008195246.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195247.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008195249.1 COG2202 FOG: PAS/PAC domain YP_008195250.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_008195253.1 COG0192 S-adenosylmethionine synthetase YP_008195254.1 COG0021 Transketolase YP_008195255.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008195256.1 COG0126 3-phosphoglycerate kinase YP_008195257.1 COG3588 Fructose-1,6-bisphosphate aldolase YP_008195259.1 COG0845 Membrane-fusion protein YP_008195260.1 COG1538 Outer membrane protein YP_008195261.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008195262.1 COG0248 Exopolyphosphatase YP_008195263.1 COG0855 Polyphosphate kinase YP_008195264.1 COG2716 Glycine cleavage system regulatory protein YP_008195265.1 COG4590 ABC-type uncharacterized transport system, permease component YP_008195266.1 COG0581 ABC-type phosphate transport system, permease component YP_008195267.1 COG1117 ABC-type phosphate transport system, ATPase component YP_008195268.1 COG0704 Phosphate uptake regulator YP_008195269.1 COG0306 Phosphate/sulphate permeases YP_008195270.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008195271.1 COG0583 Transcriptional regulator YP_008195273.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_008195274.1 COG1846 Transcriptional regulators YP_008195275.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_008195276.1 COG0308 Aminopeptidase N YP_008195277.1 COG1225 Peroxiredoxin YP_008195278.1 COG1739 Uncharacterized conserved protein YP_008195280.1 COG0420 DNA repair exonuclease YP_008195281.1 COG0419 ATPase involved in DNA repair YP_008195282.1 COG0793 Periplasmic protease YP_008195283.1 COG3633 Na+/serine symporter YP_008195284.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_008195285.1 COG2188 Transcriptional regulators YP_008195286.1 COG2987 Urocanate hydratase YP_008195287.1 COG2986 Histidine ammonia-lyase YP_008195288.1 COG3045 Uncharacterized protein conserved in bacteria YP_008195290.1 COG3713 Outer membrane protein V YP_008195293.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008195295.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_008195296.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008195298.1 COG0668 Small-conductance mechanosensitive channel YP_008195300.1 COG0477 Permeases of the major facilitator superfamily YP_008195301.1 COG0582 Integrase YP_008195303.1 COG1222 ATP-dependent 26S proteasome regulatory subunit YP_008195305.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008195307.1 COG3279 Response regulator of the LytR/AlgR family YP_008195309.1 COG1346 Putative effector of murein hydrolase YP_008195310.1 COG0784 FOG: CheY-like receiver YP_008195311.1 COG2202 FOG: PAS/PAC domain YP_008195315.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008195316.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_008195317.1 COG0513 Superfamily II DNA and RNA helicases YP_008195318.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_008195319.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008195321.1 COG2206 HD-GYP domain YP_008195322.1 COG0066 3-isopropylmalate dehydratase small subunit YP_008195323.1 COG0065 3-isopropylmalate dehydratase large subunit YP_008195324.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_008195325.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008195327.1 COG0148 Enolase YP_008195328.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_008195329.1 COG0249 Mismatch repair ATPase (MutS family) YP_008195330.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_008195331.1 COG0468 RecA/RadA recombinase YP_008195332.1 COG4555 ABC-type Na+ transport system, ATPase component YP_008195333.1 COG1668 ABC-type Na+ efflux pump, permease component YP_008195334.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_008195336.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_008195337.1 COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_008195338.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_008195339.1 COG3114 Heme exporter protein D YP_008195340.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_008195341.1 COG1138 Cytochrome c biogenesis factor YP_008195342.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008195343.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes YP_008195344.1 COG4235 Cytochrome c biogenesis factor YP_008195345.1 COG2853 Surface lipoprotein YP_008195346.1 COG1087 UDP-glucose 4-epimerase YP_008195348.1 COG3104 Dipeptide/tripeptide permease YP_008195349.1 COG3524 Capsule polysaccharide export protein YP_008195350.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_008195351.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_008195352.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008195354.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_008195355.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008195356.1 COG1216 Predicted glycosyltransferases YP_008195357.1 COG1210 UDP-glucose pyrophosphorylase YP_008195358.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_008195359.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_008195361.1 COG2913 Small protein A (tmRNA-binding) YP_008195362.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_008195363.1 COG2199 FOG: GGDEF domain YP_008195364.1 COG2904 Uncharacterized protein conserved in bacteria YP_008195368.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008195371.1 COG3098 Uncharacterized protein conserved in bacteria YP_008195372.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008195373.1 COG0716 Flavodoxins YP_008195374.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_008195375.1 COG2844 UTP:GlnB (protein PII) uridylyltransferase YP_008195376.1 COG0024 Methionine aminopeptidase YP_008195377.1 COG0052 Ribosomal protein S2 YP_008195378.1 COG0264 Translation elongation factor Ts YP_008195379.1 COG0528 Uridylate kinase YP_008195380.1 COG0233 Ribosome recycling factor YP_008195381.1 COG0020 Undecaprenyl pyrophosphate synthase YP_008195382.1 COG0575 CDP-diglyceride synthetase YP_008195383.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_008195384.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_008195385.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_008195386.1 COG2825 Outer membrane protein YP_008195387.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008195388.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_008195389.1 COG0763 Lipid A disaccharide synthetase YP_008195390.1 COG0164 Ribonuclease HII YP_008195391.1 COG0587 DNA polymerase III, alpha subunit YP_008195392.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_008195393.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_008195394.1 COG2199 FOG: GGDEF domain YP_008195395.1 COG0475 Kef-type K+ transport systems, membrane components YP_008195397.1 COG0590 Cytosine/adenosine deaminases YP_008195399.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_008195400.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_008195402.1 COG2840 Uncharacterized protein conserved in bacteria YP_008195409.1 COG0582 Integrase YP_008195410.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008195412.1 COG2608 Copper chaperone YP_008195414.1 COG0789 Predicted transcriptional regulators YP_008195419.1 COG3209 Rhs family protein YP_008195420.1 COG3209 Rhs family protein YP_008195421.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_008195422.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_008195423.1 COG3293 Transposase and inactivated derivatives YP_008195424.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_008195425.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_008195426.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195427.1 COG2188 Transcriptional regulators YP_008195428.1 COG3314 Uncharacterized protein conserved in bacteria YP_008195430.1 COG3758 Uncharacterized protein conserved in bacteria YP_008195431.1 COG2987 Urocanate hydratase YP_008195432.1 COG2188 Transcriptional regulators YP_008195433.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_008195434.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_008195435.1 COG3741 N-formylglutamate amidohydrolase YP_008195437.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008195438.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008195439.1 COG0845 Membrane-fusion protein YP_008195440.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008195441.1 COG2200 FOG: EAL domain YP_008195444.1 COG3018 Uncharacterized protein conserved in bacteria YP_008195446.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_008195447.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_008195448.1 COG0835 Chemotaxis signal transduction protein YP_008195449.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008195450.1 COG1815 Flagellar basal body protein YP_008195451.1 COG1558 Flagellar basal body rod protein YP_008195452.1 COG1843 Flagellar hook capping protein YP_008195453.1 COG1749 Flagellar hook protein FlgE YP_008195454.1 COG4787 Flagellar basal body rod protein YP_008195455.1 COG4786 Flagellar basal body rod protein YP_008195456.1 COG2063 Flagellar basal body L-ring protein YP_008195457.1 COG1706 Flagellar basal-body P-ring protein YP_008195458.1 COG3951 Rod binding protein YP_008195459.1 COG1256 Flagellar hook-associated protein YP_008195460.1 COG1344 Flagellin and related hook-associated proteins YP_008195462.1 COG1344 Flagellin and related hook-associated proteins YP_008195463.1 COG1344 Flagellin and related hook-associated proteins YP_008195464.1 COG1344 Flagellin and related hook-associated proteins YP_008195465.1 COG1334 Uncharacterized flagellar protein FlaG YP_008195466.1 COG1345 Flagellar capping protein YP_008195467.1 COG1516 Flagellin-specific chaperone FliS YP_008195469.1 COG2604 Uncharacterized protein conserved in bacteria YP_008195470.1 COG0500 SAM-dependent methyltransferases YP_008195471.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008195472.1 COG2089 Sialic acid synthase YP_008195473.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_008195474.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_008195475.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_008195476.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_008195477.1 COG1344 Flagellin and related hook-associated proteins YP_008195478.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008195479.1 COG0642 Signal transduction histidine kinase YP_008195480.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008195481.1 COG1677 Flagellar hook-basal body protein YP_008195482.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_008195483.1 COG1536 Flagellar motor switch protein YP_008195484.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_008195485.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_008195486.1 COG2882 Flagellar biosynthesis chaperone YP_008195487.1 COG3144 Flagellar hook-length control protein YP_008195488.1 COG1580 Flagellar basal body-associated protein YP_008195489.1 COG1868 Flagellar motor switch protein YP_008195490.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_008195491.1 COG3190 Flagellar biogenesis protein YP_008195492.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_008195493.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_008195494.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_008195495.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_008195496.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_008195497.1 COG1419 Flagellar GTP-binding protein YP_008195498.1 COG0455 ATPases involved in chromosome partitioning YP_008195499.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_008195500.1 COG0784 FOG: CheY-like receiver YP_008195501.1 COG3143 Chemotaxis protein YP_008195502.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008195503.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008195504.1 COG1192 ATPases involved in chromosome partitioning YP_008195505.1 COG0835 Chemotaxis signal transduction protein YP_008195506.1 COG0835 Chemotaxis signal transduction protein YP_008195508.1 COG1897 Homoserine trans-succinylase YP_008195509.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_008195510.1 COG1410 Methionine synthase I, cobalamin-binding domain YP_008195512.1 COG3123 Uncharacterized protein conserved in bacteria YP_008195513.1 COG0583 Transcriptional regulator YP_008195514.1 COG0583 Transcriptional regulator YP_008195515.1 COG0288 Carbonic anhydrase YP_008195516.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008195517.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195518.1 COG1309 Transcriptional regulator YP_008195519.1 COG3590 Predicted metalloendopeptidase YP_008195520.1 COG3146 Uncharacterized protein conserved in bacteria YP_008195521.1 COG2137 Uncharacterized protein conserved in bacteria YP_008195522.1 COG0013 Alanyl-tRNA synthetase YP_008195523.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_008195525.1 COG3630 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit YP_008195526.1 COG5016 Pyruvate/oxaloacetate carboxyltransferase YP_008195527.1 COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit YP_008195528.1 COG4167 ABC-type antimicrobial peptide transport system, ATPase component YP_008195529.1 COG4170 ABC-type antimicrobial peptide transport system, ATPase component YP_008195530.1 COG4171 ABC-type antimicrobial peptide transport system, permease component YP_008195531.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008195532.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_008195533.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_008195534.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008195536.1 COG1983 Putative stress-responsive transcriptional regulator YP_008195537.1 COG3186 Phenylalanine-4-hydroxylase YP_008195538.1 COG3283 Transcriptional regulator of aromatic amino acids metabolism YP_008195539.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_008195540.1 COG0625 Glutathione S-transferase YP_008195541.1 COG1522 Transcriptional regulators YP_008195542.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_008195544.1 COG3483 Tryptophan 2,3-dioxygenase (vermilion) YP_008195545.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195546.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195549.1 COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_008195550.1 COG0457 FOG: TPR repeat YP_008195551.1 COG3751 Predicted proline hydroxylase YP_008195552.1 COG3751 Predicted proline hydroxylase YP_008195554.1 COG0811 Biopolymer transport proteins YP_008195555.1 COG0811 Biopolymer transport proteins YP_008195556.1 COG0848 Biopolymer transport protein YP_008195557.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008195558.1 COG0457 FOG: TPR repeat YP_008195559.1 COG1444 Predicted P-loop ATPase fused to an acetyltransferase YP_008195560.1 COG1607 Acyl-CoA hydrolase YP_008195561.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195563.1 COG3201 Nicotinamide mononucleotide transporter YP_008195564.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_008195566.1 COG0456 Acetyltransferases YP_008195567.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008195568.1 COG0583 Transcriptional regulator YP_008195569.1 COG2814 Arabinose efflux permease YP_008195570.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008195571.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_008195573.1 COG1566 Multidrug resistance efflux pump YP_008195574.1 COG1846 Transcriptional regulators YP_008195575.1 COG4734 Antirestriction protein YP_008195578.1 COG4108 Peptide chain release factor RF-3 YP_008195579.1 COG0018 Arginyl-tRNA synthetase YP_008195580.1 COG0431 Predicted flavoprotein YP_008195583.1 COG0031 Cysteine synthase YP_008195584.1 COG0464 ATPases of the AAA+ class YP_008195585.1 COG3292 Predicted periplasmic ligand-binding sensor domain YP_008195586.1 COG3059 Predicted membrane protein YP_008195588.1 COG4852 Predicted membrane protein YP_008195589.1 COG3239 Fatty acid desaturase YP_008195590.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_008195592.1 COG1186 Protein chain release factor B YP_008195593.1 COG1190 Lysyl-tRNA synthetase (class II) YP_008195594.1 COG1893 Ketopantoate reductase YP_008195595.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008195596.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008195597.1 COG0612 Predicted Zn-dependent peptidases YP_008195598.1 COG2918 Gamma-glutamylcysteine synthetase YP_008195599.1 COG4764 Uncharacterized protein conserved in bacteria YP_008195601.1 COG0753 Catalase YP_008195603.1 COG2840 Uncharacterized protein conserved in bacteria YP_008195604.1 COG2890 Methylase of polypeptide chain release factors YP_008195605.1 COG0082 Chorismate synthase YP_008195606.1 COG0477 Permeases of the major facilitator superfamily YP_008195607.1 COG2719 Uncharacterized conserved protein YP_008195608.1 COG2718 Uncharacterized conserved protein YP_008195609.1 COG2766 Putative Ser protein kinase YP_008195610.1 COG0605 Superoxide dismutase YP_008195611.1 COG0278 Glutaredoxin-related protein YP_008195612.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195613.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008195614.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008195615.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195616.1 COG2906 Bacterioferritin-associated ferredoxin YP_008195617.1 COG0450 Peroxiredoxin YP_008195618.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008195619.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008195620.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_008195621.1 COG0346 Lactoylglutathione lyase and related lyases YP_008195622.1 COG1278 Cold shock proteins YP_008195624.1 COG2234 Predicted aminopeptidases YP_008195625.1 COG0177 Predicted EndoIII-related endonuclease YP_008195626.1 COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE YP_008195627.1 COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG YP_008195628.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD YP_008195629.1 COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC YP_008195630.1 COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB YP_008195631.1 COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA YP_008195632.1 COG0534 Na+-driven multidrug efflux pump YP_008195633.1 COG0556 Helicase subunit of the DNA excision repair complex YP_008195634.1 COG0583 Transcriptional regulator YP_008195635.1 COG0603 Predicted PP-loop superfamily ATPase YP_008195636.1 COG0602 Organic radical activating enzymes YP_008195638.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_008195639.1 COG1723 Uncharacterized conserved protein YP_008195640.1 COG2234 Predicted aminopeptidases YP_008195643.1 COG0471 Di- and tricarboxylate transporters YP_008195644.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1 YP_008195645.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_008195646.1 COG0529 Adenylylsulfate kinase and related kinases YP_008195647.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008195648.1 COG0591 Na+/proline symporter YP_008195649.1 COG2199 FOG: GGDEF domain YP_008195651.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008195652.1 COG4805 Uncharacterized protein conserved in bacteria YP_008195654.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008195655.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008195657.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008195658.1 COG0714 MoxR-like ATPases YP_008195659.1 COG0183 Acetyl-CoA acetyltransferase YP_008195660.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008195663.1 COG2202 FOG: PAS/PAC domain YP_008195664.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_008195665.1 COG2062 Phosphohistidine phosphatase SixA YP_008195667.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_008195668.1 COG4137 ABC-type uncharacterized transport system, permease component YP_008195669.1 COG0541 Signal recognition particle GTPase YP_008195671.1 COG1196 Chromosome segregation ATPases YP_008195673.1 COG0515 Serine/threonine protein kinase YP_008195675.1 COG2267 Lysophospholipase YP_008195676.1 COG0841 Cation/multidrug efflux pump YP_008195677.1 COG0845 Membrane-fusion protein YP_008195678.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008195681.1 COG0228 Ribosomal protein S16 YP_008195682.1 COG0806 RimM protein, required for 16S rRNA processing YP_008195683.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_008195684.1 COG0335 Ribosomal protein L19 YP_008195685.1 COG2860 Predicted membrane protein YP_008195686.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008195687.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008195688.1 COG1605 Chorismate mutase YP_008195689.1 COG1605 Chorismate mutase YP_008195690.1 COG0784 FOG: CheY-like receiver YP_008195691.1 COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins YP_008195692.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_008195693.1 COG0784 FOG: CheY-like receiver YP_008195694.1 COG4103 Uncharacterized protein conserved in bacteria YP_008195695.1 COG2199 FOG: GGDEF domain YP_008195697.1 COG0642 Signal transduction histidine kinase YP_008195698.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_008195699.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008195700.1 COG1344 Flagellin and related hook-associated proteins YP_008195701.1 COG2203 FOG: GAF domain YP_008195702.1 COG1801 Uncharacterized conserved protein YP_008195703.1 COG0173 Aspartyl-tRNA synthetase YP_008195704.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008195705.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_008195706.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_008195707.1 COG2255 Holliday junction resolvasome, helicase subunit YP_008195708.1 COG0824 Predicted thioesterase YP_008195709.1 COG0811 Biopolymer transport proteins YP_008195710.1 COG0848 Biopolymer transport protein YP_008195711.1 COG3064 Membrane protein involved in colicin uptake YP_008195712.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008195713.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008195714.1 COG1729 Uncharacterized protein conserved in bacteria YP_008195715.1 COG0379 Quinolinate synthase YP_008195717.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_008195718.1 COG1893 Ketopantoate reductase YP_008195720.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008195721.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008195722.1 COG3038 Cytochrome B561 YP_008195723.1 COG2199 FOG: GGDEF domain YP_008195726.1 COG1451 Predicted metal-dependent hydrolase YP_008195727.1 COG0517 FOG: CBS domain YP_008195728.1 COG0841 Cation/multidrug efflux pump YP_008195729.1 COG0845 Membrane-fusion protein YP_008195730.1 COG1309 Transcriptional regulator YP_008195731.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195732.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008195733.1 COG0841 Cation/multidrug efflux pump YP_008195734.1 COG0845 Membrane-fusion protein YP_008195735.1 COG2199 FOG: GGDEF domain YP_008195736.1 COG3009 Uncharacterized protein conserved in bacteria YP_008195737.1 COG3008 Paraquat-inducible protein B YP_008195738.1 COG2995 Uncharacterized paraquat-inducible protein A YP_008195740.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008195741.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_008195743.1 COG0530 Ca2+/Na+ antiporter YP_008195744.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008195745.1 COG0456 Acetyltransferases YP_008195748.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_008195749.1 COG0502 Biotin synthase and related enzymes YP_008195750.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_008195751.1 COG0500 SAM-dependent methyltransferases YP_008195752.1 COG0132 Dethiobiotin synthetase YP_008195753.1 COG3340 Peptidase E YP_008195754.1 COG0394 Protein-tyrosine-phosphatase YP_008195755.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008195756.1 COG4138 ABC-type cobalamin transport system, ATPase component YP_008195757.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008195759.1 COG3530 Uncharacterized protein conserved in bacteria YP_008195760.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_008195761.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_008195762.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008195763.1 COG0784 FOG: CheY-like receiver YP_008195764.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008195765.1 COG3608 Predicted deacylase YP_008195767.1 COG3313 Predicted Fe-S protein YP_008195768.1 COG0042 tRNA-dihydrouridine synthase YP_008195769.1 COG1943 Transposase and inactivated derivatives YP_008195771.1 COG2755 Lysophospholipase L1 and related esterases YP_008195772.1 COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component YP_008195773.1 COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component YP_008195774.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_008195775.1 COG1539 Dihydroneopterin aldolase YP_008195776.1 COG0628 Predicted permease YP_008195777.1 COG0642 Signal transduction histidine kinase YP_008195778.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008195779.1 COG3212 Predicted membrane protein YP_008195780.1 COG3871 Uncharacterized stress protein (general stress protein 26) YP_008195781.1 COG2350 Uncharacterized protein conserved in bacteria YP_008195782.1 COG0159 Tryptophan synthase alpha chain YP_008195783.1 COG0133 Tryptophan synthase beta chain YP_008195784.1 COG0134 Indole-3-glycerol phosphate synthase YP_008195785.1 COG0547 Anthranilate phosphoribosyltransferase YP_008195786.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_008195787.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_008195788.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_008195789.1 COG0009 Putative translation factor (SUA5) YP_008195790.1 COG1354 Uncharacterized conserved protein YP_008195791.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_008195792.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008195793.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_008195794.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008195795.1 COG3595 Uncharacterized conserved protein YP_008195796.1 COG2733 Predicted membrane protein YP_008195797.1 COG0500 SAM-dependent methyltransferases YP_008195798.1 COG2913 Small protein A (tmRNA-binding) YP_008195799.1 COG0497 ATPase involved in DNA repair YP_008195800.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_008195801.1 COG0061 Predicted sugar kinase YP_008195802.1 COG1454 Alcohol dehydrogenase, class IV YP_008195803.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008195804.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008195805.1 COG2021 Homoserine acetyltransferase YP_008195806.1 COG2610 H+/gluconate symporter and related permeases YP_008195807.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195808.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008195809.1 COG0591 Na+/proline symporter YP_008195810.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_008195811.1 COG0443 Molecular chaperone YP_008195812.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_008195813.1 COG3909 Cytochrome c556 YP_008195814.1 COG2202 FOG: PAS/PAC domain YP_008195815.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008195816.1 COG3658 Cytochrome b YP_008195817.1 COG0289 Dihydrodipicolinate reductase YP_008195818.1 COG0505 Carbamoylphosphate synthase small subunit YP_008195819.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008195820.1 COG0782 Transcription elongation factor YP_008195821.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008195823.1 COG0071 Molecular chaperone (small heat shock protein) YP_008195824.1 COG0282 Acetate kinase YP_008195825.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_008195826.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008195827.1 COG3668 Plasmid stabilization system protein YP_008195828.1 COG0815 Apolipoprotein N-acyltransferase YP_008195829.1 COG4535 Putative Mg2+ and Co2+ transporter CorC YP_008195830.1 COG0319 Predicted metal-dependent hydrolase YP_008195831.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_008195832.1 COG0621 2-methylthioadenine synthetase YP_008195833.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008195835.1 COG1309 Transcriptional regulator YP_008195836.1 COG2128 Uncharacterized conserved protein YP_008195840.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195841.1 COG1607 Acyl-CoA hydrolase YP_008195842.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008195843.1 COG3806 Anti-sigma factor YP_008195844.1 COG1115 Na+/alanine symporter YP_008195845.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008195846.1 COG0012 Predicted GTPase, probable translation factor YP_008195847.1 COG0193 Peptidyl-tRNA hydrolase YP_008195848.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_008195849.1 COG1064 Zn-dependent alcohol dehydrogenases YP_008195852.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_008195853.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_008195854.1 COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis YP_008195855.1 COG0373 Glutamyl-tRNA reductase YP_008195856.1 COG0216 Protein chain release factor A YP_008195857.1 COG2890 Methylase of polypeptide chain release factors YP_008195858.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008195860.1 COG3094 Uncharacterized protein conserved in bacteria YP_008195861.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_008195863.1 COG0583 Transcriptional regulator YP_008195864.1 COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold YP_008195865.1 COG2363 Uncharacterized small membrane protein YP_008195866.1 COG2933 Predicted SAM-dependent methyltransferase YP_008195867.1 COG0480 Translation elongation factors (GTPases) YP_008195868.1 COG1513 Cyanate lyase YP_008195869.1 COG0631 Serine/threonine protein phosphatase YP_008195870.1 COG2116 Formate/nitrite family of transporters YP_008195871.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_008195872.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008195873.1 COG0714 MoxR-like ATPases YP_008195874.1 COG3057 Negative regulator of replication initiationR YP_008195875.1 COG0033 Phosphoglucomutase YP_008195876.1 COG0058 Glucan phosphorylase YP_008195877.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008195878.1 COG2988 Succinylglutamate desuccinylase YP_008195879.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_008195880.1 COG0393 Uncharacterized conserved protein YP_008195881.1 COG1301 Na+/H+-dicarboxylate symporters YP_008195883.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_008195884.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008195885.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008195887.1 COG2190 Phosphotransferase system IIA components YP_008195888.1 COG3603 Uncharacterized conserved protein YP_008195889.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_008195890.1 COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins YP_008195891.1 COG3508 Homogentisate 1,2-dioxygenase YP_008195893.1 COG1846 Transcriptional regulators YP_008195895.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008195896.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008195898.1 COG0206 Cell division GTPase YP_008195900.1 COG2199 FOG: GGDEF domain YP_008195901.1 COG0841 Cation/multidrug efflux pump YP_008195902.1 COG0845 Membrane-fusion protein YP_008195903.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008195904.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008195905.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008195906.1 COG1733 Predicted transcriptional regulators YP_008195907.1 COG2202 FOG: PAS/PAC domain YP_008195908.1 COG3748 Predicted membrane protein YP_008195909.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_008195910.1 COG2351 Transthyretin-like protein YP_008195911.1 COG3195 Uncharacterized protein conserved in bacteria YP_008195912.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_008195913.1 COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B YP_008195914.1 COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A YP_008195916.1 COG1309 Transcriptional regulator YP_008195917.1 COG0726 Predicted xylanase/chitin deacetylase YP_008195919.1 COG2252 Permeases YP_008195920.1 COG1816 Adenosine deaminase YP_008195921.1 COG0784 FOG: CheY-like receiver YP_008195922.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008195923.1 COG2200 FOG: EAL domain YP_008195924.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008195925.1 COG0642 Signal transduction histidine kinase YP_008195926.1 COG5042 Purine nucleoside permease YP_008195927.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008195928.1 COG2233 Xanthine/uracil permeases YP_008195929.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_008195930.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008195931.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_008195932.1 COG0730 Predicted permeases YP_008195933.1 COG0405 Gamma-glutamyltransferase YP_008195934.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008195936.1 COG3803 Uncharacterized protein conserved in bacteria YP_008195937.1 COG1737 Transcriptional regulators YP_008195938.1 COG1266 Predicted metal-dependent membrane protease YP_008195939.1 COG0668 Small-conductance mechanosensitive channel YP_008195941.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008195942.1 COG3001 Fructosamine-3-kinase YP_008195943.1 COG0441 Threonyl-tRNA synthetase YP_008195944.1 COG0290 Translation initiation factor 3 (IF-3) YP_008195945.1 COG0291 Ribosomal protein L35 YP_008195946.1 COG0292 Ribosomal protein L20 YP_008195947.1 COG0695 Glutaredoxin and related proteins YP_008195949.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008195950.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_008195951.1 COG4464 Capsular polysaccharide biosynthesis protein YP_008195952.1 COG0457 FOG: TPR repeat YP_008195956.1 COG2199 FOG: GGDEF domain YP_008195957.1 COG3672 Predicted periplasmic protein YP_008195958.1 COG0438 Glycosyltransferase YP_008195959.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008195960.1 COG0438 Glycosyltransferase YP_008195961.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008195962.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_008195963.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_008195964.1 COG0438 Glycosyltransferase YP_008195965.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_008195966.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008195968.1 COG0438 Glycosyltransferase YP_008195969.1 COG0438 Glycosyltransferase YP_008195971.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_008195972.1 COG0073 EMAP domain YP_008195973.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008195975.1 COG2606 Uncharacterized conserved protein YP_008195976.1 COG2366 Protein related to penicillin acylase YP_008195977.1 COG1472 Beta-glucosidase-related glycosidases YP_008195978.1 COG2096 Uncharacterized conserved protein YP_008195980.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_008195982.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_008195983.1 COG2236 Predicted phosphoribosyltransferases YP_008195984.1 COG0642 Signal transduction histidine kinase YP_008195985.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008195986.1 COG3235 Predicted membrane protein YP_008195987.1 COG0708 Exonuclease III YP_008195990.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_008195991.1 COG0438 Glycosyltransferase YP_008195992.1 COG1639 Predicted signal transduction protein YP_008195993.1 COG1946 Acyl-CoA thioesterase YP_008195994.1 COG0477 Permeases of the major facilitator superfamily YP_008195995.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008195996.1 COG0448 ADP-glucose pyrophosphorylase YP_008196000.1 COG1943 Transposase and inactivated derivatives YP_008196001.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008196002.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_008196003.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008196004.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_008196005.1 COG1960 Acyl-CoA dehydrogenases YP_008196006.1 COG0789 Predicted transcriptional regulators YP_008196007.1 COG0183 Acetyl-CoA acetyltransferase YP_008196008.1 COG0657 Esterase/lipase YP_008196009.1 COG3844 Kynureninase YP_008196010.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008196011.1 COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain YP_008196012.1 COG2925 Exonuclease I YP_008196013.1 COG0642 Signal transduction histidine kinase YP_008196014.1 COG0517 FOG: CBS domain YP_008196015.1 COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_008196016.1 COG1409 Predicted phosphohydrolases YP_008196018.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196019.1 COG2199 FOG: GGDEF domain YP_008196020.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008196021.1 COG1757 Na+/H+ antiporter YP_008196022.1 COG1643 HrpA-like helicases YP_008196024.1 COG3205 Predicted membrane protein YP_008196025.1 COG1092 Predicted SAM-dependent methyltransferases YP_008196026.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008196027.1 COG0328 Ribonuclease HI YP_008196028.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008196030.1 COG4943 Predicted signal transduction protein containing sensor and EAL domains YP_008196031.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008196032.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_008196033.1 COG1301 Na+/H+-dicarboxylate symporters YP_008196035.1 COG3724 Succinylarginine dihydrolase YP_008196037.1 COG0550 Topoisomerase IA YP_008196038.1 COG3122 Uncharacterized protein conserved in bacteria YP_008196039.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_008196040.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_008196041.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008196042.1 COG2153 Predicted acyltransferase YP_008196043.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008196045.1 COG1530 Ribonucleases G and E YP_008196046.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008196047.1 COG0546 Predicted phosphatases YP_008196048.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_008196049.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_008196050.1 COG0333 Ribosomal protein L32 YP_008196051.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_008196052.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008196053.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_008196054.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196055.1 COG0236 Acyl carrier protein YP_008196056.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008196057.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008196058.1 COG1559 Predicted periplasmic solute-binding protein YP_008196059.1 COG0125 Thymidylate kinase YP_008196060.1 COG0470 ATPase involved in DNA replication YP_008196061.1 COG0084 Mg-dependent DNase YP_008196062.1 COG5135 Uncharacterized conserved protein YP_008196063.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008196064.1 COG2199 FOG: GGDEF domain YP_008196066.1 COG3296 Uncharacterized protein conserved in bacteria YP_008196068.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196069.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008196070.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008196071.1 COG0183 Acetyl-CoA acetyltransferase YP_008196072.1 COG1960 Acyl-CoA dehydrogenases YP_008196075.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_008196076.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008196077.1 COG1457 Purine-cytosine permease and related proteins YP_008196078.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_008196080.1 COG0583 Transcriptional regulator YP_008196081.1 COG2030 Acyl dehydratase YP_008196083.1 COG0668 Small-conductance mechanosensitive channel YP_008196084.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196085.1 COG2154 Pterin-4a-carbinolamine dehydratase YP_008196086.1 COG3300 MHYT domain (predicted integral membrane sensor domain) YP_008196087.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008196088.1 COG0779 Uncharacterized protein conserved in bacteria YP_008196089.1 COG0195 Transcription elongation factor YP_008196090.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_008196091.1 COG0858 Ribosome-binding factor A YP_008196092.1 COG0130 Pseudouridine synthase YP_008196094.1 COG0184 Ribosomal protein S15P/S13E YP_008196095.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008196096.1 COG1196 Chromosome segregation ATPases YP_008196097.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008196099.1 COG3751 Predicted proline hydroxylase YP_008196101.1 COG0784 FOG: CheY-like receiver YP_008196102.1 COG2374 Predicted extracellular nuclease YP_008196103.1 COG4320 Uncharacterized protein conserved in bacteria YP_008196105.1 COG0450 Peroxiredoxin YP_008196106.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_008196108.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008196110.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_008196111.1 COG3386 Gluconolactonase YP_008196112.1 COG0793 Periplasmic protease YP_008196113.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008196114.1 COG1032 Fe-S oxidoreductase YP_008196115.1 COG2947 Uncharacterized conserved protein YP_008196117.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196118.1 COG0398 Uncharacterized conserved protein YP_008196120.1 COG4134 ABC-type uncharacterized transport system, periplasmic component YP_008196121.1 COG4135 ABC-type uncharacterized transport system, permease component YP_008196122.1 COG4136 ABC-type uncharacterized transport system, ATPase component YP_008196123.1 COG0558 Phosphatidylglycerophosphate synthase YP_008196124.1 COG3000 Sterol desaturase YP_008196126.1 COG3932 Uncharacterized ABC-type transport system, permease components YP_008196127.1 COG2199 FOG: GGDEF domain YP_008196131.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008196133.1 COG3668 Plasmid stabilization system protein YP_008196134.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_008196135.1 COG2801 Transposase and inactivated derivatives YP_008196136.1 COG2963 Transposase and inactivated derivatives YP_008196137.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008196138.1 COG0691 tmRNA-binding protein YP_008196139.1 COG2867 Oligoketide cyclase/lipid transport protein YP_008196140.1 COG2914 Uncharacterized protein conserved in bacteria YP_008196141.1 COG1846 Transcriptional regulators YP_008196142.1 COG1292 Choline-glycine betaine transporter YP_008196143.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196145.1 COG0457 FOG: TPR repeat YP_008196147.1 COG1806 Uncharacterized protein conserved in bacteria YP_008196148.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_008196150.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008196151.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008196155.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008196156.1 COG2850 Uncharacterized conserved protein YP_008196157.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_008196158.1 COG0015 Adenylosuccinate lyase YP_008196159.1 COG2915 Uncharacterized protein involved in purine metabolism YP_008196160.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_008196161.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008196162.1 COG2838 Monomeric isocitrate dehydrogenase YP_008196163.1 COG1278 Cold shock proteins YP_008196164.1 COG2127 Uncharacterized conserved protein YP_008196165.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_008196166.1 COG0361 Translation initiation factor 1 (IF-1) YP_008196167.1 COG2935 Putative arginyl-tRNA:protein arginylyltransferase YP_008196168.1 COG2360 Leu/Phe-tRNA-protein transferase YP_008196169.1 COG0492 Thioredoxin reductase YP_008196170.1 COG3092 Uncharacterized protein conserved in bacteria YP_008196171.1 COG3091 Uncharacterized protein conserved in bacteria YP_008196172.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008196174.1 COG2259 Predicted membrane protein YP_008196175.1 COG0778 Nitroreductase YP_008196177.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_008196178.1 COG0320 Lipoate synthase YP_008196179.1 COG0321 Lipoate-protein ligase B YP_008196180.1 COG2921 Uncharacterized conserved protein YP_008196181.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_008196182.1 COG0797 Lipoproteins YP_008196183.1 COG0772 Bacterial cell division membrane protein YP_008196184.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_008196185.1 COG1576 Uncharacterized conserved protein YP_008196186.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_008196187.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_008196188.1 COG1466 DNA polymerase III, delta subunit YP_008196189.1 COG2980 Rare lipoprotein B YP_008196190.1 COG0495 Leucyl-tRNA synthetase YP_008196193.1 COG1067 Predicted ATP-dependent protease YP_008196194.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008196195.1 COG2199 FOG: GGDEF domain YP_008196196.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196197.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_008196198.1 COG0293 23S rRNA methylase YP_008196199.1 COG0465 ATP-dependent Zn proteases YP_008196200.1 COG0294 Dihydropteroate synthase and related enzymes YP_008196201.1 COG1109 Phosphomannomutase YP_008196202.1 COG0149 Triosephosphate isomerase YP_008196203.1 COG1314 Preprotein translocase subunit SecG YP_008196204.1 COG2199 FOG: GGDEF domain YP_008196205.1 COG0401 Uncharacterized homolog of Blt101 YP_008196207.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_008196208.1 COG0671 Membrane-associated phospholipid phosphatase YP_008196210.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196211.1 COG0561 Predicted hydrolases of the HAD superfamily YP_008196213.1 COG3569 Topoisomerase IB YP_008196214.1 COG0591 Na+/proline symporter YP_008196215.1 COG0263 Glutamate 5-kinase YP_008196216.1 COG0014 Gamma-glutamyl phosphate reductase YP_008196217.1 COG0668 Small-conductance mechanosensitive channel YP_008196218.1 COG1403 Restriction endonuclease YP_008196219.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_008196220.1 COG3492 Uncharacterized protein conserved in bacteria YP_008196224.1 COG3209 Rhs family protein YP_008196226.1 COG3547 Transposase and inactivated derivatives YP_008196228.1 COG3547 Transposase and inactivated derivatives YP_008196233.1 COG2205 Osmosensitive K+ channel histidine kinase YP_008196234.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008196236.1 COG1178 ABC-type Fe3+ transport system, permease component YP_008196241.1 COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid YP_008196244.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008196245.1 COG2801 Transposase and inactivated derivatives YP_008196246.1 COG2963 Transposase and inactivated derivatives YP_008196247.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_008196249.1 COG3547 Transposase and inactivated derivatives YP_008196251.1 COG1432 Uncharacterized conserved protein YP_008196253.1 COG5056 Acyl-CoA cholesterol acyltransferase YP_008196254.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008196258.1 COG0563 Adenylate kinase and related kinases YP_008196261.1 COG5331 Uncharacterized protein conserved in bacteria YP_008196267.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008196268.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008196270.1 COG0295 Cytidine deaminase YP_008196271.1 COG4785 Lipoprotein NlpI, contains TPR repeats YP_008196272.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008196273.1 COG2981 Uncharacterized protein involved in cysteine biosynthesis YP_008196274.1 COG1196 Chromosome segregation ATPases YP_008196275.1 COG3115 Cell division protein YP_008196276.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_008196277.1 COG3216 Uncharacterized protein conserved in bacteria YP_008196278.1 COG0658 Predicted membrane metal-binding protein YP_008196279.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008196280.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_008196281.1 COG2835 Uncharacterized conserved protein YP_008196282.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_008196283.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196284.1 COG0621 2-methylthioadenine synthetase YP_008196287.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_008196288.1 COG0435 Predicted glutathione S-transferase YP_008196289.1 COG1741 Pirin-related protein YP_008196290.1 COG1109 Phosphomannomutase YP_008196292.1 COG0372 Citrate synthase YP_008196293.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_008196294.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_008196295.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_008196296.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_008196297.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_008196298.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008196299.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_008196300.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_008196301.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196303.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_008196304.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196305.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008196306.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_008196307.1 COG0219 Predicted rRNA methylase (SpoU class) YP_008196308.1 COG3176 Putative hemolysin YP_008196309.1 COG0366 Glycosidases YP_008196310.1 COG0366 Glycosidases YP_008196311.1 COG0477 Permeases of the major facilitator superfamily YP_008196312.1 COG0366 Glycosidases YP_008196313.1 COG1609 Transcriptional regulators YP_008196314.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008196315.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196316.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008196317.1 COG2366 Protein related to penicillin acylase YP_008196318.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008196319.1 COG1309 Transcriptional regulator YP_008196321.1 COG0327 Uncharacterized conserved protein YP_008196322.1 COG0500 SAM-dependent methyltransferases YP_008196323.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_008196324.1 COG0386 Glutathione peroxidase YP_008196325.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_008196326.1 COG0784 FOG: CheY-like receiver YP_008196327.1 COG1960 Acyl-CoA dehydrogenases YP_008196328.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008196330.1 COG0500 SAM-dependent methyltransferases YP_008196331.1 COG0241 Histidinol phosphatase and related phosphatases YP_008196332.1 COG3083 Predicted hydrolase of alkaline phosphatase superfamily YP_008196333.1 COG3082 Uncharacterized protein conserved in bacteria YP_008196334.1 COG3081 Nucleoid-associated protein YP_008196335.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_008196336.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008196337.1 COG3975 Predicted protease with the C-terminal PDZ domain YP_008196339.1 COG4539 Predicted membrane protein YP_008196340.1 COG2972 Predicted signal transduction protein with a C-terminal ATPase domain YP_008196341.1 COG3279 Response regulator of the LytR/AlgR family YP_008196342.1 COG0205 6-phosphofructokinase YP_008196344.1 COG3344 Retron-type reverse transcriptase YP_008196345.1 COG3436 Transposase and inactivated derivatives YP_008196351.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_008196352.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008196353.1 COG2202 FOG: PAS/PAC domain YP_008196354.1 COG3396 Uncharacterized conserved protein YP_008196355.1 COG0535 Predicted Fe-S oxidoreductases YP_008196356.1 COG2030 Acyl dehydratase YP_008196357.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008196361.1 COG0500 SAM-dependent methyltransferases YP_008196362.1 COG0675 Transposase and inactivated derivatives YP_008196364.1 COG1451 Predicted metal-dependent hydrolase YP_008196366.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008196368.1 COG0638 20S proteasome, alpha and beta subunits YP_008196370.1 COG2051 Ribosomal protein S27E YP_008196371.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008196372.1 COG2717 Predicted membrane protein YP_008196374.1 COG3654 Prophage maintenance system killer protein YP_008196375.1 COG0582 Integrase YP_008196376.1 COG0582 Integrase YP_008196377.1 COG5520 O-Glycosyl hydrolase YP_008196378.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_008196379.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008196381.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008196382.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008196383.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_008196384.1 COG0583 Transcriptional regulator YP_008196386.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008196387.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008196392.1 COG3039 Transposase and inactivated derivatives, IS5 family YP_008196394.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008196396.1 COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif YP_008196397.1 COG0784 FOG: CheY-like receiver YP_008196399.1 COG1054 Predicted sulfurtransferase YP_008196400.1 COG5126 Ca2+-binding protein (EF-Hand superfamily) YP_008196401.1 COG0513 Superfamily II DNA and RNA helicases YP_008196402.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_008196403.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_008196404.1 COG0583 Transcriptional regulator YP_008196406.1 COG0642 Signal transduction histidine kinase YP_008196407.1 COG0583 Transcriptional regulator YP_008196408.1 COG1760 L-serine deaminase YP_008196409.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008196410.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_008196411.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain YP_008196413.1 COG1322 Uncharacterized protein conserved in bacteria YP_008196414.1 COG1404 Subtilisin-like serine proteases YP_008196415.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_008196416.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_008196417.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008196418.1 COG2961 Protein involved in catabolism of external DNA YP_008196419.1 COG0515 Serine/threonine protein kinase YP_008196420.1 COG1946 Acyl-CoA thioesterase YP_008196421.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_008196422.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_008196423.1 COG2968 Uncharacterized conserved protein YP_008196424.1 COG1956 GAF domain-containing protein YP_008196426.1 COG3109 Activator of osmoprotectant transporter ProP YP_008196427.1 COG0793 Periplasmic protease YP_008196428.1 COG0733 Na+-dependent transporters of the SNF family YP_008196429.1 COG1757 Na+/H+ antiporter YP_008196430.1 COG0308 Aminopeptidase N YP_008196433.1 COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor YP_008196434.1 COG1033 Predicted exporters of the RND superfamily YP_008196435.1 COG2902 NAD-specific glutamate dehydrogenase YP_008196436.1 COG0167 Dihydroorotate dehydrogenase YP_008196437.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_008196438.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008196439.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008196441.1 COG3130 Ribosome modulation factor YP_008196442.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008196444.1 COG0415 Deoxyribodipyrimidine photolyase YP_008196445.1 COG1196 Chromosome segregation ATPases YP_008196446.1 COG0582 Integrase YP_008196448.1 COG2059 Chromate transport protein ChrA YP_008196449.1 COG4275 Uncharacterized conserved protein YP_008196450.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_008196451.1 COG2202 FOG: PAS/PAC domain YP_008196452.1 COG2202 FOG: PAS/PAC domain YP_008196453.1 COG2202 FOG: PAS/PAC domain YP_008196454.1 COG2202 FOG: PAS/PAC domain YP_008196455.1 COG2203 FOG: GAF domain YP_008196461.1 COG1475 Predicted transcriptional regulators YP_008196462.1 COG1192 ATPases involved in chromosome partitioning YP_008196464.1 COG1846 Transcriptional regulators YP_008196465.1 COG1484 DNA replication protein YP_008196466.1 COG0415 Deoxyribodipyrimidine photolyase YP_008196467.1 COG0415 Deoxyribodipyrimidine photolyase YP_008196468.1 COG0415 Deoxyribodipyrimidine photolyase YP_008196469.1 COG0415 Deoxyribodipyrimidine photolyase YP_008196470.1 COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase YP_008196471.1 COG4338 Uncharacterized protein conserved in bacteria YP_008196472.1 COG4325 Predicted membrane protein YP_008196474.1 COG4974 Site-specific recombinase XerD YP_008196476.1 COG0818 Diacylglycerol kinase YP_008196477.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008196479.1 COG0069 Glutamate synthase domain 2 YP_008196480.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component YP_008196481.1 COG2193 Bacterioferritin (cytochrome b1) YP_008196482.1 COG2193 Bacterioferritin (cytochrome b1) YP_008196484.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_008196485.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_008196486.1 COG4736 Cbb3-type cytochrome oxidase, subunit 3 YP_008196487.1 COG2010 Cytochrome c, mono- and diheme variants YP_008196488.1 COG3198 Uncharacterized protein conserved in bacteria YP_008196489.1 COG2217 Cation transport ATPase YP_008196490.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_008196491.1 COG2836 Uncharacterized conserved protein YP_008196492.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008196493.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008196494.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_008196495.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008196497.1 COG2992 Uncharacterized FlgJ-related protein YP_008196499.1 COG1280 Putative threonine efflux protein YP_008196500.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_008196501.1 COG2897 Rhodanese-related sulfurtransferase YP_008196502.1 COG2077 Peroxiredoxin YP_008196503.1 COG3148 Uncharacterized conserved protein YP_008196505.1 COG4220 Phage DNA packaging protein, Nu1 subunit of terminase YP_008196508.1 COG0192 S-adenosylmethionine synthetase YP_008196515.1 COG0058 Glucan phosphorylase YP_008196517.1 COG3311 Predicted transcriptional regulator YP_008196519.1 COG0582 Integrase YP_008196520.1 COG0558 Phosphatidylglycerophosphate synthase YP_008196521.1 COG0322 Nuclease subunit of the excinuclease complex YP_008196522.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008196523.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_008196524.1 COG3384 Uncharacterized conserved protein YP_008196525.1 COG2259 Predicted membrane protein YP_008196526.1 COG0583 Transcriptional regulator YP_008196529.1 COG0670 Integral membrane protein, interacts with FtsH YP_008196530.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction YP_008196531.1 COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur YP_008196533.1 COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit YP_008196536.1 COG2319 FOG: WD40 repeat YP_008196537.1 COG0172 Seryl-tRNA synthetase YP_008196538.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_008196539.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_008196540.1 COG2834 Outer membrane lipoprotein-sorting protein YP_008196541.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_008196542.1 COG1522 Transcriptional regulators YP_008196543.1 COG0686 Alanine dehydrogenase YP_008196544.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_008196545.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_008196546.1 COG3771 Predicted membrane protein YP_008196547.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008196548.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008196549.1 COG0539 Ribosomal protein S1 YP_008196550.1 COG0283 Cytidylate kinase YP_008196551.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_008196552.1 COG1932 Phosphoserine aminotransferase YP_008196553.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008196554.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008196555.1 COG0209 Ribonucleotide reductase, alpha subunit YP_008196556.1 COG0208 Ribonucleotide reductase, beta subunit YP_008196557.1 COG0633 Ferredoxin YP_008196558.1 COG5460 Uncharacterized conserved protein YP_008196560.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008196561.1 COG2203 FOG: GAF domain YP_008196562.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008196563.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_008196564.1 COG3317 Uncharacterized lipoprotein YP_008196565.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008196566.1 COG2716 Glycine cleavage system regulatory protein YP_008196567.1 COG1225 Peroxiredoxin YP_008196568.1 COG0628 Predicted permease YP_008196569.1 COG4783 Putative Zn-dependent protease, contains TPR repeats YP_008196570.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008196571.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008196572.1 COG0655 Multimeric flavodoxin WrbA YP_008196573.1 COG3308 Predicted membrane protein YP_008196574.1 COG0593 ATPase involved in DNA replication initiation YP_008196575.1 COG3249 Uncharacterized protein conserved in bacteria YP_008196576.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_008196577.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_008196579.1 COG1960 Acyl-CoA dehydrogenases YP_008196580.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_008196581.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008196582.1 COG0500 SAM-dependent methyltransferases YP_008196583.1 COG0500 SAM-dependent methyltransferases YP_008196584.1 COG4240 Predicted kinase YP_008196585.1 COG3769 Predicted hydrolase (HAD superfamily) YP_008196586.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008196587.1 COG0366 Glycosidases YP_008196588.1 COG0546 Predicted phosphatases YP_008196589.1 COG0303 Molybdopterin biosynthesis enzyme YP_008196590.1 COG0534 Na+-driven multidrug efflux pump YP_008196591.1 COG2068 Uncharacterized MobA-related protein YP_008196592.1 COG3825 Uncharacterized protein conserved in bacteria YP_008196593.1 COG0714 MoxR-like ATPases YP_008196594.1 COG0031 Cysteine synthase YP_008196598.1 COG3547 Transposase and inactivated derivatives YP_008196600.1 COG3668 Plasmid stabilization system protein YP_008196602.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008196603.1 COG2944 Predicted transcriptional regulator YP_008196606.1 COG3547 Transposase and inactivated derivatives YP_008196608.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008196609.1 COG3668 Plasmid stabilization system protein YP_008196611.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_008196612.1 COG0405 Gamma-glutamyltransferase YP_008196613.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008196614.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008196615.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008196616.1 COG0386 Glutathione peroxidase YP_008196617.1 COG1182 Acyl carrier protein phosphodiesterase YP_008196619.1 COG2873 O-acetylhomoserine sulfhydrylase YP_008196620.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008196621.1 COG3332 Uncharacterized conserved protein YP_008196622.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_008196624.1 COG1671 Uncharacterized protein conserved in bacteria YP_008196625.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196626.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196627.1 COG1960 Acyl-CoA dehydrogenases YP_008196628.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_008196629.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196631.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_008196632.1 COG1505 Serine proteases of the peptidase family S9A YP_008196633.1 COG0841 Cation/multidrug efflux pump YP_008196634.1 COG0845 Membrane-fusion protein YP_008196636.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_008196637.1 COG2086 Electron transfer flavoprotein, beta subunit YP_008196638.1 COG0644 Dehydrogenases (flavoproteins) YP_008196639.1 COG2916 DNA-binding protein H-NS YP_008196640.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008196642.1 COG0716 Flavodoxins YP_008196643.1 COG0840 Methyl-accepting chemotaxis protein YP_008196644.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_008196645.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008196646.1 COG1984 Allophanate hydrolase subunit 2 YP_008196647.1 COG2049 Allophanate hydrolase subunit 1 YP_008196648.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_008196649.1 COG2996 Uncharacterized protein conserved in bacteria YP_008196650.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_008196651.1 COG0845 Membrane-fusion protein YP_008196652.1 COG0841 Cation/multidrug efflux pump YP_008196653.1 COG0841 Cation/multidrug efflux pump YP_008196656.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_008196657.1 COG1896 Predicted hydrolases of HD superfamily YP_008196658.1 COG1896 Predicted hydrolases of HD superfamily YP_008196660.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008196661.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008196663.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008196664.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_008196665.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196666.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008196667.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008196669.1 COG1896 Predicted hydrolases of HD superfamily YP_008196670.1 COG0232 dGTP triphosphohydrolase YP_008196671.1 COG2041 Sulfite oxidase and related enzymes YP_008196672.1 COG2717 Predicted membrane protein YP_008196673.1 COG1238 Predicted membrane protein YP_008196675.1 COG3012 Uncharacterized protein conserved in bacteria YP_008196677.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008196678.1 COG3173 Predicted aminoglycoside phosphotransferase YP_008196679.1 COG1960 Acyl-CoA dehydrogenases YP_008196680.1 COG0406 Fructose-2,6-bisphosphatase YP_008196681.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196682.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_008196683.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_008196684.1 COG2755 Lysophospholipase L1 and related esterases YP_008196685.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008196686.1 COG4148 ABC-type molybdate transport system, ATPase component YP_008196687.1 COG4149 ABC-type molybdate transport system, permease component YP_008196688.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_008196689.1 COG0314 Molybdopterin converting factor, large subunit YP_008196690.1 COG1977 Molybdopterin converting factor, small subunit YP_008196691.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_008196692.1 COG0521 Molybdopterin biosynthesis enzymes YP_008196693.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008196694.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008196695.1 COG3608 Predicted deacylase YP_008196696.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008196697.1 COG4115 Uncharacterized protein conserved in bacteria YP_008196700.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_008196701.1 COG3268 Uncharacterized conserved protein YP_008196702.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008196705.1 COG0620 Methionine synthase II (cobalamin-independent) YP_008196706.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196708.1 COG5006 Predicted permease, DMT superfamily YP_008196711.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_008196712.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_008196713.1 COG1330 Exonuclease V gamma subunit YP_008196716.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008196717.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008196718.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_008196721.1 COG0583 Transcriptional regulator YP_008196723.1 COG3085 Uncharacterized protein conserved in bacteria YP_008196724.1 COG3861 Uncharacterized protein conserved in bacteria YP_008196725.1 COG0640 Predicted transcriptional regulators YP_008196726.1 COG0607 Rhodanese-related sulfurtransferase YP_008196727.1 COG0583 Transcriptional regulator YP_008196728.1 COG3932 Uncharacterized ABC-type transport system, permease components YP_008196729.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008196730.1 COG0642 Signal transduction histidine kinase YP_008196731.1 COG0642 Signal transduction histidine kinase YP_008196732.1 COG0784 FOG: CheY-like receiver YP_008196733.1 COG0642 Signal transduction histidine kinase YP_008196738.1 COG1896 Predicted hydrolases of HD superfamily YP_008196743.1 COG3139 Uncharacterized protein conserved in bacteria YP_008196746.1 COG1115 Na+/alanine symporter YP_008196747.1 COG2866 Predicted carboxypeptidase YP_008196748.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008196750.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_008196751.1 COG0362 6-phosphogluconate dehydrogenase YP_008196752.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008196753.1 COG0296 1,4-alpha-glucan branching enzyme YP_008196754.1 COG1640 4-alpha-glucanotransferase YP_008196755.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008196756.1 COG0676 Uncharacterized enzymes related to aldose 1-epimerase YP_008196757.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008196758.1 COG0837 Glucokinase YP_008196759.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008196760.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_008196761.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_008196762.1 COG1737 Transcriptional regulators YP_008196763.1 COG0469 Pyruvate kinase YP_008196764.1 COG0775 Nucleoside phosphorylase YP_008196766.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_008196767.1 COG3021 Uncharacterized protein conserved in bacteria YP_008196770.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008196771.1 COG3403 Uncharacterized conserved protein YP_008196772.1 COG3665 Uncharacterized conserved protein YP_008196774.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_008196775.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196776.1 COG3717 5-keto 4-deoxyuronate isomerase YP_008196777.1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component YP_008196778.1 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component YP_008196779.1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component YP_008196780.1 COG1609 Transcriptional regulators YP_008196781.1 COG2721 Altronate dehydratase YP_008196782.1 COG1904 Glucuronate isomerase YP_008196783.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_008196784.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008196785.1 COG0524 Sugar kinases, ribokinase family YP_008196786.1 COG2755 Lysophospholipase L1 and related esterases YP_008196787.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196788.1 COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins YP_008196789.1 COG5434 Endopolygalacturonase YP_008196790.1 COG4677 Pectin methylesterase YP_008196791.1 COG0642 Signal transduction histidine kinase YP_008196792.1 COG2378 Predicted transcriptional regulator YP_008196794.1 COG2356 Endonuclease I YP_008196795.1 COG0840 Methyl-accepting chemotaxis protein YP_008196797.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008196798.1 COG0583 Transcriptional regulator YP_008196799.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_008196800.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008196801.1 COG0778 Nitroreductase YP_008196802.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008196803.1 COG2203 FOG: GAF domain YP_008196805.1 COG0471 Di- and tricarboxylate transporters YP_008196806.1 COG0717 Deoxycytidine deaminase YP_008196807.1 COG0489 ATPases involved in chromosome partitioning YP_008196808.1 COG0143 Methionyl-tRNA synthetase YP_008196809.1 COG0668 Small-conductance mechanosensitive channel YP_008196810.1 COG0500 SAM-dependent methyltransferases YP_008196811.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008196812.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008196817.1 COG0215 Cysteinyl-tRNA synthetase YP_008196818.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008196819.1 COG2908 Uncharacterized protein conserved in bacteria YP_008196820.1 COG1785 Alkaline phosphatase YP_008196821.1 COG1785 Alkaline phosphatase YP_008196824.1 COG2268 Uncharacterized protein conserved in bacteria YP_008196825.1 COG0583 Transcriptional regulator YP_008196826.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196828.1 COG0366 Glycosidases YP_008196829.1 COG1733 Predicted transcriptional regulators YP_008196830.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008196831.1 COG0753 Catalase YP_008196832.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008196833.1 COG0583 Transcriptional regulator YP_008196834.1 COG2939 Carboxypeptidase C (cathepsin A) YP_008196835.1 COG3124 Uncharacterized protein conserved in bacteria YP_008196836.1 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA YP_008196837.1 COG0534 Na+-driven multidrug efflux pump YP_008196838.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_008196839.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_008196840.1 COG3147 Uncharacterized protein conserved in bacteria YP_008196841.1 COG0285 Folylpolyglutamate synthase YP_008196842.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_008196844.1 COG0101 Pseudouridylate synthase YP_008196845.1 COG3170 Tfp pilus assembly protein FimV YP_008196846.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008196847.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_008196848.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008196849.1 COG3668 Plasmid stabilization system protein YP_008196850.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_008196851.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008196852.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008196853.1 COG3055 Uncharacterized protein conserved in bacteria YP_008196854.1 COG4121 Uncharacterized conserved protein YP_008196855.1 COG0459 Chaperonin GroEL (HSP60 family) YP_008196858.1 COG0346 Lactoylglutathione lyase and related lyases YP_008196859.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008196861.1 COG0789 Predicted transcriptional regulators YP_008196862.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008196864.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_008196865.1 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA YP_008196866.1 COG2031 Short chain fatty acids transporter YP_008196867.1 COG3292 Predicted periplasmic ligand-binding sensor domain YP_008196868.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_008196869.1 COG0612 Predicted Zn-dependent peptidases YP_008196871.1 COG3199 Uncharacterized conserved protein YP_008196872.1 COG3101 Uncharacterized protein conserved in bacteria YP_008196874.1 COG0824 Predicted thioesterase YP_008196875.1 COG3577 Predicted aspartyl protease YP_008196877.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008196878.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008196879.1 COG1309 Transcriptional regulator YP_008196880.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008196883.1 COG1309 Transcriptional regulator YP_008196884.1 COG4399 Uncharacterized protein conserved in bacteria YP_008196885.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008196889.1 COG1770 Protease II YP_008196890.1 COG2186 Transcriptional regulators YP_008196891.1 COG3067 Na+/H+ antiporter YP_008196892.1 COG1495 Disulfide bond formation protein DsbB YP_008196893.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008196895.1 COG2983 Uncharacterized conserved protein YP_008196896.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_008196897.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008196898.1 COG3100 Uncharacterized protein conserved in bacteria YP_008196899.1 COG0349 Ribonuclease D YP_008196900.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008196901.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008196902.1 COG3065 Starvation-inducible outer membrane lipoprotein YP_008196904.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_008196905.1 COG1199 Rad3-related DNA helicases YP_008196907.1 COG0671 Membrane-associated phospholipid phosphatase YP_008196910.1 COG0366 Glycosidases YP_008196914.1 COG2930 Uncharacterized conserved protein YP_008196915.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008196917.1 COG0040 ATP phosphoribosyltransferase YP_008196918.1 COG0141 Histidinol dehydrogenase YP_008196919.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008196920.1 COG0241 Histidinol phosphatase and related phosphatases YP_008196921.1 COG0118 Glutamine amidotransferase YP_008196922.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_008196923.1 COG0107 Imidazoleglycerol-phosphate synthase YP_008196924.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_008196926.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_008196927.1 COG2116 Formate/nitrite family of transporters YP_008196928.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_008196929.1 COG0681 Signal peptidase I YP_008196930.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008196931.1 COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily YP_008196932.1 COG0563 Adenylate kinase and related kinases YP_008196933.1 COG0326 Molecular chaperone, HSP90 family YP_008196934.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_008196936.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008196937.1 COG0718 Uncharacterized protein conserved in bacteria YP_008196938.1 COG2812 DNA polymerase III, gamma/tau subunits YP_008196939.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_008196940.1 COG3219 Uncharacterized protein conserved in bacteria YP_008196941.1 COG3220 Uncharacterized protein conserved in bacteria YP_008196943.1 COG3710 DNA-binding winged-HTH domains YP_008196945.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008196946.1 COG1183 Phosphatidylserine synthase YP_008196949.1 COG0457 FOG: TPR repeat YP_008196950.1 COG0277 FAD/FMN-containing dehydrogenases YP_008196951.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_008196952.1 COG1496 Uncharacterized conserved protein YP_008196953.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008196954.1 COG4105 DNA uptake lipoprotein YP_008196955.1 COG3806 Anti-sigma factor YP_008196956.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008196957.1 COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease YP_008196959.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008196960.1 COG2907 Predicted NAD/FAD-binding protein YP_008196961.1 COG3496 Uncharacterized conserved protein YP_008196962.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_008196963.1 COG1360 Flagellar motor protein YP_008196964.1 COG1291 Flagellar motor component YP_008196965.1 COG1722 Exonuclease VII small subunit YP_008196966.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_008196967.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_008196968.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_008196969.1 COG0611 Thiamine monophosphate kinase YP_008196970.1 COG0781 Transcription termination factor YP_008196971.1 COG0054 Riboflavin synthase beta-chain YP_008196972.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_008196973.1 COG0307 Riboflavin synthase alpha chain YP_008196974.1 COG0117 Pyrimidine deaminase YP_008196975.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_008196976.1 COG0112 Glycine/serine hydroxymethyltransferase YP_008196977.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_008196978.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008196980.1 COG1066 Predicted ATP-dependent serine protease YP_008196982.1 COG0560 Phosphoserine phosphatase YP_008196984.1 COG0084 Mg-dependent DNase YP_008196985.1 COG0259 Pyridoxamine-phosphate oxidase YP_008196986.1 COG1159 GTPase YP_008196987.1 COG0571 dsRNA-specific ribonuclease YP_008196988.1 COG0681 Signal peptidase I YP_008196989.1 COG0481 Membrane GTPase LepA YP_008196990.1 COG3086 Positive regulator of sigma E activity YP_008196991.1 COG3026 Negative regulator of sigma E activity YP_008196992.1 COG3073 Negative regulator of sigma E activity YP_008196993.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008196995.1 COG0029 Aspartate oxidase YP_008196996.1 COG2030 Acyl dehydratase YP_008196998.1 COG2938 Uncharacterized conserved protein YP_008196999.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_008197000.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_008197001.1 COG0347 Nitrogen regulatory protein PII YP_008197002.1 COG0171 NAD synthase YP_008197003.1 COG4970 Tfp pilus assembly protein FimT YP_008197004.1 COG4968 Tfp pilus assembly protein PilE YP_008197006.1 COG4795 Type II secretory pathway, component PulJ YP_008197008.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008197009.1 COG4968 Tfp pilus assembly protein PilE YP_008197010.1 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 YP_008197011.1 COG4726 Tfp pilus assembly protein PilX YP_008197012.1 COG4966 Tfp pilus assembly protein PilW YP_008197014.1 COG0761 Penicillin tolerance protein YP_008197015.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_008197016.1 COG0597 Lipoprotein signal peptidase YP_008197017.1 COG0060 Isoleucyl-tRNA synthetase YP_008197018.1 COG0196 FAD synthase YP_008197019.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_008197020.1 COG0268 Ribosomal protein S20 YP_008197021.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008197022.1 COG3173 Predicted aminoglycoside phosphotransferase YP_008197023.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008197024.1 COG0385 Predicted Na+-dependent transporter YP_008197025.1 COG0583 Transcriptional regulator YP_008197026.1 COG2908 Uncharacterized protein conserved in bacteria YP_008197027.1 COG3176 Putative hemolysin YP_008197028.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008197030.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008197031.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008197032.1 COG0466 ATP-dependent Lon protease, bacterial type YP_008197033.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_008197034.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_008197035.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_008197036.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_008197037.1 COG3310 Uncharacterized protein conserved in bacteria YP_008197038.1 COG1720 Uncharacterized conserved protein YP_008197039.1 COG0442 Prolyl-tRNA synthetase YP_008197040.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_008197041.1 COG2829 Outer membrane phospholipase A YP_008197042.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_008197043.1 COG0840 Methyl-accepting chemotaxis protein YP_008197046.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_008197047.1 COG0516 IMP dehydrogenase/GMP reductase YP_008197048.1 COG1570 Exonuclease VII, large subunit YP_008197051.1 COG1160 Predicted GTPases YP_008197052.1 COG1520 FOG: WD40-like repeat YP_008197053.1 COG2976 Uncharacterized protein conserved in bacteria YP_008197054.1 COG0124 Histidyl-tRNA synthetase YP_008197055.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_008197056.1 COG1426 Uncharacterized protein conserved in bacteria YP_008197057.1 COG3063 Tfp pilus assembly protein PilF YP_008197058.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_008197059.1 COG0105 Nucleoside diphosphate kinase YP_008197060.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_008197061.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_008197062.1 COG0316 Uncharacterized conserved protein YP_008197063.1 COG0520 Selenocysteine lyase YP_008197064.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_008197065.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_008197066.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_008197067.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_008197068.1 COG1959 Predicted transcriptional regulator YP_008197069.1 COG2072 Predicted flavoprotein involved in K+ transport YP_008197070.1 COG1045 Serine acetyltransferase YP_008197071.1 COG0565 rRNA methylase YP_008197072.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_008197074.1 COG3279 Response regulator of the LytR/AlgR family YP_008197075.1 COG0341 Preprotein translocase subunit SecF YP_008197076.1 COG0342 Preprotein translocase subunit SecD YP_008197077.1 COG1862 Preprotein translocase subunit YajC YP_008197078.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_008197079.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_008197081.1 COG3789 Uncharacterized protein conserved in bacteria YP_008197082.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008197083.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008197085.1 COG3766 Predicted membrane protein YP_008197086.1 COG5463 Predicted integral membrane protein YP_008197087.1 COG0754 Glutathionylspermidine synthase YP_008197088.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008197090.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008197091.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_008197092.1 COG5621 Predicted secreted hydrolase YP_008197093.1 COG2066 Glutaminase YP_008197094.1 COG1785 Alkaline phosphatase YP_008197095.1 COG0835 Chemotaxis signal transduction protein YP_008197096.1 COG2224 Isocitrate lyase YP_008197097.1 COG0583 Transcriptional regulator YP_008197098.1 COG2225 Malate synthase YP_008197099.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008197100.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008197106.1 COG0277 FAD/FMN-containing dehydrogenases YP_008197107.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008197108.1 COG1434 Uncharacterized conserved protein YP_008197109.1 COG3176 Putative hemolysin YP_008197110.1 COG0457 FOG: TPR repeat YP_008197112.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008197113.1 COG0438 Glycosyltransferase YP_008197115.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008197116.1 COG0438 Glycosyltransferase YP_008197117.1 COG0726 Predicted xylanase/chitin deacetylase YP_008197119.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_008197120.1 COG0438 Glycosyltransferase YP_008197122.1 COG0438 Glycosyltransferase YP_008197124.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008197125.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_008197128.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_008197129.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008197131.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008197134.1 COG0726 Predicted xylanase/chitin deacetylase YP_008197135.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_008197136.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008197137.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_008197138.1 COG0489 ATPases involved in chromosome partitioning YP_008197140.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008197141.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_008197142.1 COG2827 Predicted endonuclease containing a URI domain YP_008197145.1 COG1391 Glutamine synthetase adenylyltransferase YP_008197147.1 COG1560 Lauroyl/myristoyl acyltransferase YP_008197149.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_008197150.1 COG1960 Acyl-CoA dehydrogenases YP_008197152.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197153.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008197154.1 COG1435 Thymidine kinase YP_008197155.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197156.1 COG1609 Transcriptional regulators YP_008197157.1 COG0035 Uracil phosphoribosyltransferase YP_008197159.1 COG1396 Predicted transcriptional regulators YP_008197165.1 COG1161 Predicted GTPases YP_008197166.1 COG0566 rRNA methylases YP_008197167.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008197168.1 COG4539 Predicted membrane protein YP_008197169.1 COG3187 Heat shock protein YP_008197170.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008197171.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008197172.1 COG1292 Choline-glycine betaine transporter YP_008197174.1 COG3129 Predicted SAM-dependent methyltransferase YP_008197175.1 COG0789 Predicted transcriptional regulators YP_008197177.1 COG0006 Xaa-Pro aminopeptidase YP_008197181.1 COG1960 Acyl-CoA dehydrogenases YP_008197182.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_008197187.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008197188.1 COG0642 Signal transduction histidine kinase YP_008197189.1 COG3072 Adenylate cyclase YP_008197190.1 COG3682 Predicted transcriptional regulator YP_008197193.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008197194.1 COG0346 Lactoylglutathione lyase and related lyases YP_008197195.1 COG4807 Uncharacterized protein conserved in bacteria YP_008197196.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008197197.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs YP_008197198.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008197199.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008197200.1 COG4206 Outer membrane cobalamin receptor protein YP_008197202.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008197203.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_008197204.1 COG0693 Putative intracellular protease/amidase YP_008197205.1 COG1295 Predicted membrane protein YP_008197207.1 COG4681 Uncharacterized protein conserved in bacteria YP_008197212.1 COG0778 Nitroreductase YP_008197213.1 COG0477 Permeases of the major facilitator superfamily YP_008197214.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008197216.1 COG0514 Superfamily II DNA helicase YP_008197218.1 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain YP_008197220.1 COG0642 Signal transduction histidine kinase YP_008197222.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008197224.1 COG2133 Glucose/sorbosone dehydrogenases YP_008197225.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_008197226.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_008197227.1 COG0830 Urease accessory protein UreF YP_008197228.1 COG2371 Urease accessory protein UreE YP_008197229.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_008197230.1 COG0832 Urea amidohydrolase (urease) beta subunit YP_008197231.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_008197232.1 COG0829 Urease accessory protein UreH YP_008197233.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_008197234.1 COG4674 Uncharacterized ABC-type transport system, ATPase component YP_008197235.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_008197236.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_008197237.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_008197239.1 COG0642 Signal transduction histidine kinase YP_008197240.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008197241.1 COG1484 DNA replication protein YP_008197242.1 COG4584 Transposase and inactivated derivatives YP_008197243.1 COG3177 Uncharacterized conserved protein YP_008197245.1 COG3385 FOG: Transposase and inactivated derivatives YP_008197246.1 COG3513 Uncharacterized protein conserved in bacteria YP_008197247.1 COG1467 Eukaryotic-type DNA primase, catalytic (small) subunit YP_008197250.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_008197251.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_008197254.1 COG0714 MoxR-like ATPases YP_008197258.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008197261.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008197262.1 COG2608 Copper chaperone YP_008197264.1 COG0789 Predicted transcriptional regulators YP_008197265.1 COG0582 Integrase YP_008197266.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008197267.1 COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II YP_008197268.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_008197270.1 COG3696 Putative silver efflux pump YP_008197271.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_008197272.1 COG3696 Putative silver efflux pump YP_008197273.1 COG0845 Membrane-fusion protein YP_008197274.1 COG1538 Outer membrane protein YP_008197276.1 COG1230 Co/Zn/Cd efflux system component YP_008197278.1 COG1230 Co/Zn/Cd efflux system component YP_008197279.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008197280.1 COG3436 Transposase and inactivated derivatives YP_008197281.1 COG3436 Transposase and inactivated derivatives YP_008197283.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_008197284.1 COG2203 FOG: GAF domain YP_008197285.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_008197286.1 COG0120 Ribose 5-phosphate isomerase YP_008197287.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008197288.1 COG3137 Putative salt-induced outer membrane protein YP_008197289.1 COG3137 Putative salt-induced outer membrane protein YP_008197290.1 COG1639 Predicted signal transduction protein YP_008197291.1 COG3313 Predicted Fe-S protein YP_008197292.1 COG2859 Uncharacterized protein conserved in bacteria YP_008197293.1 COG0841 Cation/multidrug efflux pump YP_008197294.1 COG0845 Membrane-fusion protein YP_008197295.1 COG0583 Transcriptional regulator YP_008197297.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008197298.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008197299.1 COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component YP_008197300.1 COG2186 Transcriptional regulators YP_008197301.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB YP_008197302.1 COG3023 Negative regulator of beta-lactamase expression YP_008197303.1 COG3577 Predicted aspartyl protease YP_008197304.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_008197305.1 COG4969 Tfp pilus assembly protein, major pilin PilA YP_008197306.1 COG1459 Type II secretory pathway, component PulF YP_008197307.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_008197308.1 COG0237 Dephospho-CoA kinase YP_008197309.1 COG4582 Uncharacterized protein conserved in bacteria YP_008197310.1 COG3024 Uncharacterized protein conserved in bacteria YP_008197311.1 COG2988 Succinylglutamate desuccinylase YP_008197312.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008197313.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_008197314.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008197315.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_008197316.1 COG0206 Cell division GTPase YP_008197317.1 COG0849 Actin-like ATPase involved in cell division YP_008197318.1 COG1589 Cell division septal protein YP_008197319.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_008197320.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_008197321.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_008197322.1 COG0772 Bacterial cell division membrane protein YP_008197323.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_008197324.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_008197325.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_008197326.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_008197327.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_008197328.1 COG3116 Cell division protein YP_008197329.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_008197330.1 COG2001 Uncharacterized protein conserved in bacteria YP_008197333.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_008197334.1 COG3696 Putative silver efflux pump YP_008197335.1 COG3696 Putative silver efflux pump YP_008197339.1 COG2267 Lysophospholipase YP_008197340.1 COG0678 Peroxiredoxin YP_008197341.1 COG1192 ATPases involved in chromosome partitioning YP_008197342.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008197343.1 COG2199 FOG: GGDEF domain YP_008197344.1 COG3791 Uncharacterized conserved protein YP_008197345.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008197346.1 COG0642 Signal transduction histidine kinase YP_008197347.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008197350.1 COG3391 Uncharacterized conserved protein YP_008197351.1 COG0501 Zn-dependent protease with chaperone function YP_008197352.1 COG0668 Small-conductance mechanosensitive channel YP_008197353.1 COG1385 Uncharacterized protein conserved in bacteria YP_008197354.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008197355.1 COG1678 Putative transcriptional regulator YP_008197356.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_008197358.1 COG5008 Tfp pilus assembly protein, ATPase PilU YP_008197359.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_008197360.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_008197361.1 COG0345 Pyrroline-5-carboxylate reductase YP_008197362.1 COG0762 Predicted integral membrane protein YP_008197364.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008197365.1 COG0346 Lactoylglutathione lyase and related lyases YP_008197366.1 COG4805 Uncharacterized protein conserved in bacteria YP_008197367.1 COG0625 Glutathione S-transferase YP_008197368.1 COG2032 Cu/Zn superoxide dismutase YP_008197369.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_008197370.1 COG0225 Peptide methionine sulfoxide reductase YP_008197371.1 COG2323 Predicted membrane protein YP_008197373.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_008197374.1 COG1396 Predicted transcriptional regulators YP_008197375.1 COG2814 Arabinose efflux permease YP_008197376.1 COG0724 RNA-binding proteins (RRM domain) YP_008197377.1 COG3022 Uncharacterized protein conserved in bacteria YP_008197379.1 COG0176 Transaldolase YP_008197380.1 COG0166 Glucose-6-phosphate isomerase YP_008197382.1 COG0692 Uracil DNA glycosylase YP_008197383.1 COG0498 Threonine synthase YP_008197384.1 COG0083 Homoserine kinase YP_008197385.1 COG0527 Aspartokinases YP_008197386.1 COG0178 Excinuclease ATPase subunit YP_008197387.1 COG0583 Transcriptional regulator YP_008197388.1 COG1062 Zn-dependent alcohol dehydrogenases, class III YP_008197390.1 COG0640 Predicted transcriptional regulators YP_008197391.1 COG0394 Protein-tyrosine-phosphatase YP_008197392.1 COG0431 Predicted flavoprotein YP_008197393.1 COG0798 Arsenite efflux pump ACR3 and related permeases YP_008197394.1 COG0784 FOG: CheY-like receiver YP_008197395.1 COG4579 Isocitrate dehydrogenase kinase/phosphatase YP_008197396.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008197397.1 COG0642 Signal transduction histidine kinase YP_008197401.1 COG2515 1-aminocyclopropane-1-carboxylate deaminase YP_008197403.1 COG3000 Sterol desaturase YP_008197405.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008197407.1 COG1748 Saccharopine dehydrogenase and related proteins YP_008197408.1 COG0019 Diaminopimelate decarboxylase YP_008197410.1 COG0313 Predicted methyltransferases YP_008197411.1 COG3107 Putative lipoprotein YP_008197412.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_008197414.1 COG0438 Glycosyltransferase YP_008197415.1 COG0279 Phosphoheptose isomerase YP_008197416.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_008197417.1 COG0477 Permeases of the major facilitator superfamily YP_008197419.1 COG2076 Membrane transporters of cations and cationic drugs YP_008197420.1 COG4585 Signal transduction histidine kinase YP_008197421.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008197424.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197425.1 COG1802 Transcriptional regulators YP_008197426.1 COG2513 PEP phosphonomutase and related enzymes YP_008197427.1 COG0372 Citrate synthase YP_008197428.1 COG1048 Aconitase A YP_008197429.1 COG2828 Uncharacterized protein conserved in bacteria YP_008197430.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008197431.1 COG1940 Transcriptional regulator/sugar kinase YP_008197432.1 COG2379 Putative glycerate kinase YP_008197433.1 COG0591 Na+/proline symporter YP_008197434.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197435.1 COG1626 Neutral trehalase YP_008197436.1 COG2942 N-acyl-D-glucosamine 2-epimerase YP_008197437.1 COG3428 Predicted membrane protein YP_008197438.1 COG3402 Uncharacterized conserved protein YP_008197439.1 COG0642 Signal transduction histidine kinase YP_008197440.1 COG3023 Negative regulator of beta-lactamase expression YP_008197441.1 COG0067 Glutamate synthase domain 1 YP_008197442.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_008197445.1 COG0775 Nucleoside phosphorylase YP_008197446.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB YP_008197447.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_008197448.1 COG0607 Rhodanese-related sulfurtransferase YP_008197450.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008197451.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_008197452.1 COG0162 Tyrosyl-tRNA synthetase YP_008197454.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008197455.1 COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases YP_008197456.1 COG0738 Fucose permease YP_008197457.1 COG3659 Carbohydrate-selective porin YP_008197458.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008197459.1 COG3832 Uncharacterized conserved protein YP_008197460.1 COG2873 O-acetylhomoserine sulfhydrylase YP_008197461.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008197462.1 COG0625 Glutathione S-transferase YP_008197463.1 COG0316 Uncharacterized conserved protein YP_008197465.1 COG2326 Uncharacterized conserved protein YP_008197466.1 COG0851 Septum formation topological specificity factor YP_008197467.1 COG2894 Septum formation inhibitor-activating ATPase YP_008197468.1 COG0850 Septum formation inhibitor YP_008197469.1 COG0114 Fumarase YP_008197470.1 COG3241 Azurin YP_008197472.1 COG0038 Chloride channel protein EriC YP_008197473.1 COG1981 Predicted membrane protein YP_008197476.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_008197477.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_008197478.1 COG0784 FOG: CheY-like receiver YP_008197479.1 COG1217 Predicted membrane GTPase involved in stress response YP_008197481.1 COG0174 Glutamine synthetase YP_008197483.1 COG3852 Signal transduction histidine kinase, nitrogen specific YP_008197484.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008197485.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008197486.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008197487.1 COG3076 Uncharacterized protein conserved in bacteria YP_008197489.1 COG2202 FOG: PAS/PAC domain YP_008197490.1 COG4877 Uncharacterized protein conserved in bacteria YP_008197491.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008197492.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_008197493.1 COG0642 Signal transduction histidine kinase YP_008197494.1 COG0525 Valyl-tRNA synthetase YP_008197495.1 COG2927 DNA polymerase III, chi subunit YP_008197496.1 COG0260 Leucyl aminopeptidase YP_008197497.1 COG0795 Predicted permeases YP_008197498.1 COG0795 Predicted permeases YP_008197499.1 COG1714 Predicted membrane protein/domain YP_008197500.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197501.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008197502.1 COG5343 Uncharacterized protein conserved in bacteria YP_008197504.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_008197507.1 COG3668 Plasmid stabilization system protein YP_008197508.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_008197510.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008197511.1 COG0457 FOG: TPR repeat YP_008197514.1 COG1802 Transcriptional regulators YP_008197516.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008197518.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_008197519.1 COG3661 Alpha-glucuronidase YP_008197520.1 COG3507 Beta-xylosidase YP_008197522.1 COG2199 FOG: GGDEF domain YP_008197524.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008197525.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008197526.1 COG1397 ADP-ribosylglycohydrolase YP_008197527.1 COG0673 Predicted dehydrogenases and related proteins YP_008197528.1 COG0642 Signal transduction histidine kinase YP_008197529.1 COG0628 Predicted permease YP_008197531.1 COG0748 Putative heme iron utilization protein YP_008197532.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_008197533.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008197534.1 COG4558 ABC-type hemin transport system, periplasmic component YP_008197536.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008197538.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_008197539.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008197541.1 COG4796 Type II secretory pathway, component HofQ YP_008197542.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197545.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_008197546.1 COG1283 Na+/phosphate symporter YP_008197547.1 COG0397 Uncharacterized conserved protein YP_008197548.1 COG0006 Xaa-Pro aminopeptidase YP_008197549.1 COG0499 S-adenosylhomocysteine hydrolase YP_008197550.1 COG2010 Cytochrome c, mono- and diheme variants YP_008197551.1 COG4993 Glucose dehydrogenase YP_008197552.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008197554.1 COG3391 Uncharacterized conserved protein YP_008197555.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008197556.1 COG0842 ABC-type multidrug transport system, permease component YP_008197557.1 COG0260 Leucyl aminopeptidase YP_008197558.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_008197559.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_008197561.1 COG0535 Predicted Fe-S oxidoreductases YP_008197562.1 COG1026 Predicted Zn-dependent peptidases, insulinase-like YP_008197563.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197566.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008197567.1 COG0642 Signal transduction histidine kinase YP_008197568.1 COG3287 Uncharacterized conserved protein YP_008197569.1 COG3901 Regulator of nitric oxide reductase transcription YP_008197570.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008197571.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008197572.1 COG4585 Signal transduction histidine kinase YP_008197573.1 COG2202 FOG: PAS/PAC domain YP_008197574.1 COG0583 Transcriptional regulator YP_008197575.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008197576.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_008197577.1 COG1292 Choline-glycine betaine transporter YP_008197578.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008197579.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008197580.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197581.1 COG1409 Predicted phosphohydrolases YP_008197582.1 COG0583 Transcriptional regulator YP_008197583.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_008197584.1 COG0277 FAD/FMN-containing dehydrogenases YP_008197585.1 COG2771 DNA-binding HTH domain-containing proteins YP_008197586.1 COG1462 Uncharacterized protein involved in formation of curli polymers YP_008197588.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_008197591.1 COG1404 Subtilisin-like serine proteases YP_008197592.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008197593.1 COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific YP_008197594.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008197595.1 COG3971 2-keto-4-pentenoate hydratase YP_008197596.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_008197597.1 COG0513 Superfamily II DNA and RNA helicases YP_008197600.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008197601.1 COG0524 Sugar kinases, ribokinase family YP_008197602.1 COG0524 Sugar kinases, ribokinase family YP_008197604.1 COG2186 Transcriptional regulators YP_008197605.1 COG3264 Small-conductance mechanosensitive channel YP_008197607.1 COG0376 Catalase (peroxidase I) YP_008197609.1 COG2202 FOG: PAS/PAC domain YP_008197610.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_008197611.1 COG3568 Metal-dependent hydrolase YP_008197612.1 COG0583 Transcriptional regulator YP_008197613.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197614.1 COG0730 Predicted permeases YP_008197615.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008197616.1 COG0784 FOG: CheY-like receiver YP_008197617.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_008197618.1 COG0642 Signal transduction histidine kinase YP_008197619.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008197620.1 COG0417 DNA polymerase elongation subunit (family B) YP_008197622.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008197623.1 COG0724 RNA-binding proteins (RRM domain) YP_008197625.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008197626.1 COG1309 Transcriptional regulator YP_008197627.1 COG1398 Fatty-acid desaturase YP_008197628.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008197630.1 COG1573 Uracil-DNA glycosylase YP_008197631.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008197633.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008197634.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_008197635.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_008197637.1 COG5345 Uncharacterized protein conserved in bacteria YP_008197639.1 COG1983 Putative stress-responsive transcriptional regulator YP_008197640.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008197642.1 COG0042 tRNA-dihydrouridine synthase YP_008197648.1 COG1196 Chromosome segregation ATPases YP_008197649.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008197650.1 COG1100 GTPase SAR1 and related small G proteins YP_008197651.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008197652.1 COG0627 Predicted esterase YP_008197653.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008197654.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008197655.1 COG0668 Small-conductance mechanosensitive channel YP_008197658.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008197659.1 COG0733 Na+-dependent transporters of the SNF family YP_008197660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008197661.1 COG3011 Uncharacterized protein conserved in bacteria YP_008197662.1 COG0225 Peptide methionine sulfoxide reductase YP_008197665.1 COG0716 Flavodoxins YP_008197667.1 COG0848 Biopolymer transport protein YP_008197668.1 COG0587 DNA polymerase III, alpha subunit YP_008197670.1 COG0457 FOG: TPR repeat YP_008197671.1 COG3405 Endoglucanase Y YP_008197672.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_008197674.1 COG4123 Predicted O-methyltransferase YP_008197675.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008197676.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008197678.1 COG2199 FOG: GGDEF domain YP_008197679.1 COG1171 Threonine dehydratase YP_008197680.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_008197681.1 COG0531 Amino acid transporters YP_008197682.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008197683.1 COG0346 Lactoylglutathione lyase and related lyases YP_008197684.1 COG0583 Transcriptional regulator YP_008197685.1 COG0121 Predicted glutamine amidotransferase YP_008197687.1 COG4682 Predicted membrane protein YP_008197691.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_008197692.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197693.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008197694.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008197695.1 COG0778 Nitroreductase YP_008197696.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008197697.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008197698.1 COG1335 Amidases related to nicotinamidase YP_008197699.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008197700.1 COG1309 Transcriptional regulator YP_008197701.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008197702.1 COG3000 Sterol desaturase YP_008197703.1 COG4628 Uncharacterized conserved protein YP_008197704.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008197705.1 COG4728 Uncharacterized protein conserved in bacteria YP_008197706.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008197707.1 COG1396 Predicted transcriptional regulators YP_008197708.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008197709.1 COG2991 Uncharacterized protein conserved in bacteria YP_008197710.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_008197711.1 COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF YP_008197712.1 COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE YP_008197713.1 COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD YP_008197714.1 COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC YP_008197715.1 COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB YP_008197716.1 COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA YP_008197717.1 COG3007 Uncharacterized paraquat-inducible protein B YP_008197718.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008197719.1 COG2352 Phosphoenolpyruvate carboxylase YP_008197720.1 COG0376 Catalase (peroxidase I) YP_008197722.1 COG0039 Malate/lactate dehydrogenases YP_008197723.1 COG1438 Arginine repressor YP_008197724.1 COG0693 Putative intracellular protease/amidase YP_008197725.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008197726.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_008197728.1 COG0572 Uridine kinase YP_008197729.1 COG1972 Nucleoside permease YP_008197730.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_008197731.1 COG0457 FOG: TPR repeat YP_008197733.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008197734.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008197735.1 COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains YP_008197736.1 COG4147 Predicted symporter YP_008197737.1 COG4327 Predicted membrane protein YP_008197738.1 COG0591 Na+/proline symporter YP_008197739.1 COG0668 Small-conductance mechanosensitive channel YP_008197740.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008197741.1 COG3608 Predicted deacylase YP_008197742.1 COG4067 Uncharacterized protein conserved in archaea YP_008197744.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008197745.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008197746.1 COG2238 Ribosomal protein S19E (S16A) YP_008197747.1 COG1283 Na+/phosphate symporter YP_008197748.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008197749.1 COG3211 Predicted phosphatase YP_008197750.1 COG2202 FOG: PAS/PAC domain YP_008197751.1 COG0050 GTPases - translation elongation factors YP_008197752.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_008197753.1 COG1654 Biotin operon repressor YP_008197754.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_008197756.1 COG1538 Outer membrane protein YP_008197757.1 COG0845 Membrane-fusion protein YP_008197758.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008197759.1 COG0583 Transcriptional regulator YP_008197760.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_008197761.1 COG3744 Uncharacterized protein conserved in bacteria YP_008197762.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_008197763.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_008197764.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008197765.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_008197766.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_008197767.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_008197768.1 COG1209 dTDP-glucose pyrophosphorylase YP_008197769.1 COG0457 FOG: TPR repeat YP_008197770.1 COG0438 Glycosyltransferase YP_008197771.1 COG1216 Predicted glycosyltransferases YP_008197772.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008197775.1 COG3436 Transposase and inactivated derivatives YP_008197777.1 COG3119 Arylsulfatase A and related enzymes YP_008197779.1 COG3436 Transposase and inactivated derivatives YP_008197780.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_008197781.1 COG3551 Uncharacterized protein conserved in bacteria YP_008197783.1 COG3436 Transposase and inactivated derivatives YP_008197784.1 COG3436 Transposase and inactivated derivatives YP_008197785.1 COG3436 Transposase and inactivated derivatives YP_008197792.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008197801.1 COG0499 S-adenosylhomocysteine hydrolase YP_008197802.1 COG3754 Lipopolysaccharide biosynthesis protein YP_008197803.1 COG5610 Predicted hydrolase (HAD superfamily) YP_008197804.1 COG1344 Flagellin and related hook-associated proteins YP_008197805.1 COG4115 Uncharacterized protein conserved in bacteria YP_008197806.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008197807.1 COG0203 Ribosomal protein L17 YP_008197808.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_008197809.1 COG0522 Ribosomal protein S4 and related proteins YP_008197810.1 COG0100 Ribosomal protein S11 YP_008197811.1 COG0099 Ribosomal protein S13 YP_008197812.1 COG0257 Ribosomal protein L36 YP_008197813.1 COG0201 Preprotein translocase subunit SecY YP_008197814.1 COG0200 Ribosomal protein L15 YP_008197815.1 COG1841 Ribosomal protein L30/L7E YP_008197816.1 COG0098 Ribosomal protein S5 YP_008197817.1 COG0256 Ribosomal protein L18 YP_008197818.1 COG0097 Ribosomal protein L6P/L9E YP_008197819.1 COG0096 Ribosomal protein S8 YP_008197820.1 COG0199 Ribosomal protein S14 YP_008197821.1 COG0094 Ribosomal protein L5 YP_008197822.1 COG0198 Ribosomal protein L24 YP_008197823.1 COG0093 Ribosomal protein L14 YP_008197824.1 COG0642 Signal transduction histidine kinase YP_008197826.1 COG1404 Subtilisin-like serine proteases YP_008197827.1 COG0457 FOG: TPR repeat YP_008197828.1 COG0566 rRNA methylases YP_008197829.1 COG0557 Exoribonuclease R YP_008197830.1 COG3093 Plasmid maintenance system antidote protein YP_008197832.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_008197833.1 COG3668 Plasmid stabilization system protein YP_008197834.1 COG3905 Predicted transcriptional regulator YP_008197835.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008197836.1 COG5591 Uncharacterized conserved protein YP_008197837.1 COG3658 Cytochrome b YP_008197838.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008197840.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_008197841.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_008197842.1 COG5611 Predicted nucleic-acid-binding protein, contains PIN domain YP_008197843.1 COG2002 Regulators of stationary/sporulation gene expression YP_008197844.1 COG2234 Predicted aminopeptidases YP_008197845.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008197846.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008197847.1 COG1510 Predicted transcriptional regulators YP_008197848.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008197849.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008197850.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_008197851.1 COG1522 Transcriptional regulators YP_008197853.1 COG1278 Cold shock proteins YP_008197854.1 COG0661 Predicted unusual protein kinase YP_008197855.1 COG3165 Uncharacterized protein conserved in bacteria YP_008197856.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_008197857.1 COG2818 3-methyladenine DNA glycosylase YP_008197858.1 COG0339 Zn-dependent oligopeptidases YP_008197859.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008197860.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_008197861.1 COG0642 Signal transduction histidine kinase YP_008197862.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008197863.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008197864.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008197865.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008197868.1 COG0457 FOG: TPR repeat YP_008197869.1 COG1262 Uncharacterized conserved protein YP_008197874.1 COG1257 Hydroxymethylglutaryl-CoA reductase YP_008197875.1 COG0845 Membrane-fusion protein YP_008197876.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008197877.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008197879.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008197880.1 COG2002 Regulators of stationary/sporulation gene expression YP_008197882.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_008197883.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_008197884.1 COG3087 Cell division protein YP_008197885.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_008197886.1 COG0254 Ribosomal protein L31 YP_008197888.1 COG0281 Malic enzyme YP_008197889.1 COG3060 Transcriptional regulator of met regulon YP_008197890.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_008197891.1 COG1295 Predicted membrane protein YP_008197894.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008197895.1 COG1490 D-Tyr-tRNAtyr deacylase YP_008197896.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008197897.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008197898.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_008197899.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_008197900.1 COG2177 Cell division protein YP_008197901.1 COG2884 Predicted ATPase involved in cell division YP_008197902.1 COG0552 Signal recognition particle GTPase YP_008197903.1 COG0742 N6-adenine-specific methylase YP_008197904.1 COG3068 Uncharacterized protein conserved in bacteria YP_008197905.1 COG2095 Multiple antibiotic transporter YP_008197907.1 COG0260 Leucyl aminopeptidase YP_008197908.1 COG1489 DNA-binding protein, stimulates sugar fermentation YP_008197909.1 COG1734 DnaK suppressor protein YP_008197910.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008197911.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_008197912.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008197913.1 COG0413 Ketopantoate hydroxymethyltransferase YP_008197914.1 COG0414 Panthothenate synthetase YP_008197915.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_008197916.1 COG2200 FOG: EAL domain YP_008197917.1 COG0500 SAM-dependent methyltransferases YP_008197918.1 COG0842 ABC-type multidrug transport system, permease component YP_008197919.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008197920.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008197921.1 COG0642 Signal transduction histidine kinase YP_008197922.1 COG4774 Outer membrane receptor for monomeric catechols YP_008197923.1 COG3128 Uncharacterized iron-regulated protein YP_008197924.1 COG3794 Plastocyanin YP_008197925.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008197926.1 COG1253 Hemolysins and related proteins containing CBS domains YP_008197927.1 COG0701 Predicted permeases YP_008197928.1 COG1966 Carbon starvation protein, predicted membrane protein YP_008197929.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008197930.1 COG0657 Esterase/lipase YP_008197931.1 COG3735 Uncharacterized protein conserved in bacteria YP_008197932.1 COG3293 Transposase and inactivated derivatives YP_008197933.1 COG0050 GTPases - translation elongation factors YP_008197934.1 COG0480 Translation elongation factors (GTPases) YP_008197935.1 COG0049 Ribosomal protein S7 YP_008197936.1 COG0048 Ribosomal protein S12 YP_008197937.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_008197938.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_008197940.1 COG0244 Ribosomal protein L10 YP_008197941.1 COG0081 Ribosomal protein L1 YP_008197942.1 COG0080 Ribosomal protein L11 YP_008197946.1 COG0250 Transcription antiterminator YP_008197947.1 COG0690 Preprotein translocase subunit SecE YP_008197948.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008197949.1 COG0684 Demethylmenaquinone methyltransferase YP_008197950.1 COG3590 Predicted metalloendopeptidase YP_008197951.1 COG3602 Uncharacterized protein conserved in bacteria YP_008197952.1 COG0513 Superfamily II DNA and RNA helicases YP_008197953.1 COG0418 Dihydroorotase YP_008197954.1 COG3040 Bacterial lipocalin YP_008197955.1 COG4989 Predicted oxidoreductase YP_008197956.1 COG0346 Lactoylglutathione lyase and related lyases YP_008197957.1 COG0668 Small-conductance mechanosensitive channel YP_008197958.1 COG0738 Fucose permease YP_008197959.1 COG0366 Glycosidases YP_008197961.1 COG0302 GTP cyclohydrolase I YP_008197962.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008197963.1 COG2957 Peptidylarginine deiminase and related enzymes YP_008197964.1 COG0388 Predicted amidohydrolase YP_008197965.1 COG1407 Predicted ICC-like phosphoesterases YP_008197966.1 COG1201 Lhr-like helicases YP_008197967.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_008197968.1 COG1793 ATP-dependent DNA ligase YP_008197969.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_008197970.1 COG0524 Sugar kinases, ribokinase family YP_008197971.1 COG1940 Transcriptional regulator/sugar kinase YP_008197972.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_008197973.1 COG0625 Glutathione S-transferase YP_008197974.1 COG0625 Glutathione S-transferase YP_008197976.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_008197977.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008197978.1 COG3651 Uncharacterized protein conserved in bacteria YP_008197979.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008197980.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008197982.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_008197983.1 COG2978 Putative p-aminobenzoyl-glutamate transporter YP_008197984.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008197985.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008197986.1 COG2262 GTPases YP_008197987.1 COG1923 Uncharacterized host factor I protein YP_008197988.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_008197989.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_008197990.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_008197991.1 COG0802 Predicted ATPase or kinase YP_008197992.1 COG0062 Uncharacterized conserved protein YP_008197993.1 COG1600 Uncharacterized Fe-S protein YP_008197995.1 COG0407 Uroporphyrinogen-III decarboxylase YP_008197996.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding YP_008197997.1 COG3160 Regulator of sigma D YP_008197998.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_008197999.1 COG1406 Predicted inhibitor of MCP methylation, homolog of CheC YP_008198000.1 COG0432 Uncharacterized conserved protein YP_008198001.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008198002.1 COG0305 Replicative DNA helicase YP_008198004.1 COG3595 Uncharacterized conserved protein YP_008198006.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008198007.1 COG2258 Uncharacterized protein conserved in bacteria YP_008198009.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_008198010.1 COG0359 Ribosomal protein L9 YP_008198011.1 COG0238 Ribosomal protein S18 YP_008198012.1 COG0360 Ribosomal protein S6 YP_008198013.1 COG0642 Signal transduction histidine kinase YP_008198014.1 COG3141 Uncharacterized protein conserved in bacteria YP_008198015.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008198016.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_008198017.1 COG2202 FOG: PAS/PAC domain YP_008198018.1 COG0642 Signal transduction histidine kinase YP_008198019.1 COG0840 Methyl-accepting chemotaxis protein YP_008198021.1 COG1230 Co/Zn/Cd efflux system component YP_008198022.1 COG2273 Beta-glucanase/Beta-glucan synthetase YP_008198023.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008198024.1 COG1757 Na+/H+ antiporter YP_008198025.1 COG1472 Beta-glucosidase-related glycosidases YP_008198026.1 COG0738 Fucose permease YP_008198027.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_008198028.1 COG1609 Transcriptional regulators YP_008198029.1 COG0477 Permeases of the major facilitator superfamily YP_008198030.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_008198031.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_008198032.1 COG4890 Predicted outer membrane lipoprotein YP_008198033.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008198034.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008198036.1 COG2202 FOG: PAS/PAC domain YP_008198038.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008198039.1 COG0730 Predicted permeases YP_008198041.1 COG4319 Ketosteroid isomerase homolog YP_008198042.1 COG2503 Predicted secreted acid phosphatase YP_008198043.1 COG2199 FOG: GGDEF domain YP_008198044.1 COG0477 Permeases of the major facilitator superfamily YP_008198045.1 COG2375 Siderophore-interacting protein YP_008198046.1 COG3237 Uncharacterized protein conserved in bacteria YP_008198050.1 COG1186 Protein chain release factor B YP_008198051.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008198053.1 COG0517 FOG: CBS domain YP_008198055.1 COG3038 Cytochrome B561 YP_008198056.1 COG2353 Uncharacterized conserved protein YP_008198057.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_008198058.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008198060.1 COG0583 Transcriptional regulator YP_008198061.1 COG2067 Long-chain fatty acid transport protein YP_008198062.1 COG2130 Putative NADP-dependent oxidoreductases YP_008198063.1 COG2199 FOG: GGDEF domain YP_008198064.1 COG0642 Signal transduction histidine kinase YP_008198065.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008198066.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_008198067.1 COG1349 Transcriptional regulators of sugar metabolism YP_008198068.1 COG0673 Predicted dehydrogenases and related proteins YP_008198069.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_008198070.1 COG2199 FOG: GGDEF domain YP_008198071.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008198072.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_008198073.1 COG2169 Adenosine deaminase YP_008198074.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008198075.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_008198077.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_008198078.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_008198079.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_008198080.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008198084.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008198085.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008198086.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008198088.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008198089.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_008198090.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_008198091.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_008198092.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_008198093.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_008198095.1 COG4456 Virulence-associated protein and related proteins YP_008198096.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_008198097.1 COG0582 Integrase YP_008198100.1 COG0459 Chaperonin GroEL (HSP60 family) YP_008198101.1 COG0234 Co-chaperonin GroES (HSP10) YP_008198102.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_008198103.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_008198104.1 COG4232 Thiol:disulfide interchange protein YP_008198105.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008198106.1 COG0757 3-dehydroquinate dehydratase II YP_008198107.1 COG0511 Biotin carboxyl carrier protein YP_008198108.1 COG0439 Biotin carboxylase YP_008198112.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008198113.1 COG1403 Restriction endonuclease YP_008198115.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008198117.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008198118.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008198119.1 COG2264 Ribosomal protein L11 methylase YP_008198120.1 COG0042 tRNA-dihydrouridine synthase YP_008198121.1 COG2901 Factor for inversion stimulation Fis, transcriptional activator YP_008198122.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_008198123.1 COG4798 Predicted methyltransferase YP_008198124.1 COG0151 Phosphoribosylamine-glycine ligase YP_008198125.1 COG2992 Uncharacterized FlgJ-related protein YP_008198127.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008198128.1 COG3954 Phosphoribulokinase YP_008198130.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008198132.1 COG0642 Signal transduction histidine kinase YP_008198133.1 COG0477 Permeases of the major facilitator superfamily YP_008198134.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases YP_008198135.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_008198136.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_008198137.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_008198138.1 COG3031 Type II secretory pathway, component PulC YP_008198139.1 COG1450 Type II secretory pathway, component PulD YP_008198140.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008198141.1 COG1459 Type II secretory pathway, component PulF YP_008198142.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008198143.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008198144.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008198145.1 COG4795 Type II secretory pathway, component PulJ YP_008198146.1 COG3156 Type II secretory pathway, component PulK YP_008198147.1 COG3297 Type II secretory pathway, component PulL YP_008198148.1 COG3149 Type II secretory pathway, component PulM YP_008198150.1 COG5339 Uncharacterized protein conserved in bacteria YP_008198151.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008198152.1 COG1986 Uncharacterized conserved protein YP_008198153.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008198154.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008198155.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_008198156.1 COG2353 Uncharacterized conserved protein YP_008198157.1 COG2943 Membrane glycosyltransferase YP_008198158.1 COG3131 Periplasmic glucans biosynthesis protein YP_008198160.1 COG3089 Uncharacterized protein conserved in bacteria YP_008198161.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold YP_008198162.1 COG5589 Uncharacterized conserved protein YP_008198163.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008198164.1 COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain YP_008198167.1 COG2900 Uncharacterized protein conserved in bacteria YP_008198168.1 COG2319 FOG: WD40 repeat YP_008198169.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008198171.1 COG0782 Transcription elongation factor YP_008198172.1 COG2183 Transcriptional accessory protein YP_008198173.1 COG4870 Cysteine protease YP_008198176.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008198177.1 COG1040 Predicted amidophosphoribosyltransferases YP_008198179.1 COG0316 Uncharacterized conserved protein YP_008198181.1 COG1794 Aspartate racemase YP_008198182.1 COG0346 Lactoylglutathione lyase and related lyases YP_008198183.1 COG0534 Na+-driven multidrug efflux pump YP_008198184.1 COG0726 Predicted xylanase/chitin deacetylase YP_008198185.1 COG0456 Acetyltransferases YP_008198186.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_008198187.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_008198188.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_008198190.1 COG3346 Uncharacterized conserved protein YP_008198192.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_008198193.1 COG3175 Cytochrome oxidase assembly factor YP_008198194.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_008198195.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_008198196.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008198197.1 COG2203 FOG: GAF domain YP_008198198.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_008198199.1 COG1171 Threonine dehydratase YP_008198200.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008198201.1 COG2860 Predicted membrane protein YP_008198202.1 COG0606 Predicted ATPase with chaperone activity YP_008198203.1 COG0583 Transcriptional regulator YP_008198204.1 COG0059 Ketol-acid reductoisomerase YP_008198205.1 COG0477 Permeases of the major facilitator superfamily YP_008198207.1 COG0729 Outer membrane protein YP_008198208.1 COG2911 Uncharacterized protein conserved in bacteria YP_008198210.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008198212.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008198213.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_008198214.1 COG0824 Predicted thioesterase YP_008198215.1 COG0263 Glutamate 5-kinase YP_008198216.1 COG0308 Aminopeptidase N YP_008198219.1 COG0661 Predicted unusual protein kinase YP_008198221.1 COG0468 RecA/RadA recombinase YP_008198222.1 COG3816 Uncharacterized protein conserved in bacteria YP_008198223.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_008198224.1 COG1238 Predicted membrane protein YP_008198228.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_008198229.1 COG0461 Orotate phosphoribosyltransferase YP_008198230.1 COG0689 RNase PH YP_008198232.1 COG1561 Uncharacterized stress-induced protein YP_008198233.1 COG0582 Integrase YP_008198234.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008198235.1 COG1396 Predicted transcriptional regulators YP_008198236.1 COG4680 Uncharacterized protein conserved in bacteria YP_008198237.1 COG5499 Predicted transcription regulator containing HTH domain YP_008198238.1 COG4951 Uncharacterized protein conserved in bacteria YP_008198243.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_008198244.1 COG0732 Restriction endonuclease S subunits YP_008198245.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008198246.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_008198247.1 COG3655 Predicted transcriptional regulator YP_008198248.1 COG5519 Superfamily II helicase and inactivated derivatives YP_008198249.1 COG3311 Predicted transcriptional regulator YP_008198250.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_008198252.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008198253.1 COG1396 Predicted transcriptional regulators YP_008198254.1 COG4680 Uncharacterized protein conserved in bacteria YP_008198255.1 COG3177 Uncharacterized conserved protein YP_008198257.1 COG1609 Transcriptional regulators YP_008198259.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008198260.1 COG2206 HD-GYP domain YP_008198261.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase YP_008198262.1 COG3148 Uncharacterized conserved protein YP_008198263.1 COG0625 Glutathione S-transferase YP_008198266.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_008198267.1 COG0055 F0F1-type ATP synthase, beta subunit YP_008198268.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_008198269.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_008198270.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_008198271.1 COG0711 F0F1-type ATP synthase, subunit b YP_008198272.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_008198273.1 COG0356 F0F1-type ATP synthase, subunit a YP_008198274.1 COG3312 F0F1-type ATP synthase, subunit I YP_008198275.1 COG1475 Predicted transcriptional regulators YP_008198276.1 COG1192 ATPases involved in chromosome partitioning YP_008198277.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_008198278.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_008198279.1 COG1484 DNA replication protein YP_008198280.1 COG1291 Flagellar motor component YP_008198281.1 COG0716 Flavodoxins YP_008198282.1 COG0486 Predicted GTPase YP_008198283.1 COG1666 Uncharacterized protein conserved in bacteria YP_008198284.1 COG0706 Preprotein translocase subunit YidC YP_008198285.1 COG0759 Uncharacterized conserved protein YP_008198286.1 COG0594 RNase P protein component