-- dump date 20140618_200448 -- class Genbank::CDS -- table cds_note -- id note YP_008170071.1 COG0593 ATPase involved in DNA replication initiation YP_008170072.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_008170073.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_008170074.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008170075.1 COG0430 RNA 3'-terminal phosphate cyclase YP_008170076.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_008170077.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_008170078.1 COG2818 3-methyladenine DNA glycosylase YP_008170080.1 COG3078 Uncharacterized protein conserved in bacteria YP_008170081.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008170082.1 COG2863 Cytochrome c553 YP_008170083.1 COG0218 Predicted GTPase YP_008170084.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_008170085.1 COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis YP_008170086.1 COG0168 Trk-type K+ transport systems, membrane components YP_008170087.1 COG0569 K+ transport systems, NAD-binding component YP_008170088.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_008170089.1 COG0223 Methionyl-tRNA formyltransferase YP_008170090.1 COG0242 N-formylmethionyl-tRNA deformylase YP_008170091.1 COG1652 Uncharacterized protein containing LysM domain YP_008170092.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_008170093.1 COG2922 Uncharacterized protein conserved in bacteria YP_008170094.1 COG0551 Zn-finger domain associated with topoisomerase type I YP_008170095.1 COG0009 Putative translation factor (SUA5) YP_008170096.1 COG0408 Coproporphyrinogen III oxidase YP_008170097.1 COG3047 Outer membrane protein W YP_008170098.1 COG2346 Truncated hemoglobins YP_008170099.1 COG0169 Shikimate 5-dehydrogenase YP_008170100.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_008170101.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_008170103.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008170104.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008170105.1 COG0587 DNA polymerase III, alpha subunit YP_008170106.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008170107.1 COG1066 Predicted ATP-dependent serine protease YP_008170109.1 COG4805 Uncharacterized protein conserved in bacteria YP_008170110.1 COG4517 Uncharacterized protein conserved in bacteria YP_008170111.1 COG2234 Predicted aminopeptidases YP_008170112.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008170113.1 COG1309 Transcriptional regulator YP_008170114.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_008170115.1 COG2003 DNA repair proteins YP_008170120.1 COG0227 Ribosomal protein L28 YP_008170121.1 COG0267 Ribosomal protein L33 YP_008170123.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_008170124.1 COG0669 Phosphopantetheine adenylyltransferase YP_008170125.1 COG0515 Serine/threonine protein kinase YP_008170126.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008170127.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008170128.1 COG0362 6-phosphogluconate dehydrogenase YP_008170129.1 COG2199 FOG: GGDEF domain YP_008170130.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_008170131.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_008170132.1 COG0607 Rhodanese-related sulfurtransferase YP_008170133.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008170134.1 COG1580 Flagellar basal body-associated protein YP_008170135.1 COG3161 4-hydroxybenzoate synthetase (chorismate lyase) YP_008170136.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_008170137.1 COG4737 Uncharacterized protein conserved in bacteria YP_008170138.1 COG2944 Predicted transcriptional regulator YP_008170139.1 COG2960 Uncharacterized protein conserved in bacteria YP_008170140.1 COG0210 Superfamily I DNA and RNA helicases YP_008170141.1 COG2199 FOG: GGDEF domain YP_008170142.1 COG3245 Cytochrome c5 YP_008170143.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008170144.1 COG1396 Predicted transcriptional regulators YP_008170146.1 COG1757 Na+/H+ antiporter YP_008170147.1 COG2391 Predicted transporter component YP_008170148.1 COG2391 Predicted transporter component YP_008170149.1 COG1959 Predicted transcriptional regulator YP_008170150.1 COG0730 Predicted permeases YP_008170151.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008170152.1 COG3453 Uncharacterized protein conserved in bacteria YP_008170153.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008170156.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_008170157.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_008170158.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008170159.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008170161.1 COG0607 Rhodanese-related sulfurtransferase YP_008170162.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008170163.1 COG0450 Peroxiredoxin YP_008170165.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_008170166.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008170167.1 COG1538 Outer membrane protein YP_008170168.1 COG0845 Membrane-fusion protein YP_008170169.1 COG3696 Putative silver efflux pump YP_008170171.1 COG1292 Choline-glycine betaine transporter YP_008170175.1 COG3886 Predicted HKD family nuclease YP_008170176.1 COG0500 SAM-dependent methyltransferases YP_008170177.1 COG0845 Membrane-fusion protein YP_008170178.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008170179.1 COG0842 ABC-type multidrug transport system, permease component YP_008170180.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008170182.1 COG1960 Acyl-CoA dehydrogenases YP_008170183.1 COG0583 Transcriptional regulator YP_008170184.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008170185.1 COG3106 Predicted ATPase YP_008170186.1 COG3768 Predicted membrane protein YP_008170187.1 COG2966 Uncharacterized conserved protein YP_008170189.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_008170190.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_008170191.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_008170192.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008170193.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_008170194.1 COG0422 Thiamine biosynthesis protein ThiC YP_008170195.1 COG3071 Uncharacterized enzyme of heme biosynthesis YP_008170196.1 COG2959 Uncharacterized enzyme of heme biosynthesis YP_008170197.1 COG1587 Uroporphyrinogen-III synthase YP_008170198.1 COG0181 Porphobilinogen deaminase YP_008170199.1 COG2199 FOG: GGDEF domain YP_008170201.1 COG0400 Predicted esterase YP_008170202.1 COG0194 Guanylate kinase YP_008170203.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_008170204.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008170205.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008170206.1 COG0566 rRNA methylases YP_008170207.1 COG1200 RecG-like helicase YP_008170208.1 COG0500 SAM-dependent methyltransferases YP_008170209.1 COG0678 Peroxiredoxin YP_008170210.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_008170211.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_008170212.1 COG1178 ABC-type Fe3+ transport system, permease component YP_008170213.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008170214.1 COG0668 Small-conductance mechanosensitive channel YP_008170215.1 COG2081 Predicted flavoproteins YP_008170216.1 COG2801 Transposase and inactivated derivatives YP_008170218.1 COG2801 Transposase and inactivated derivatives YP_008170220.1 COG3696 Putative silver efflux pump YP_008170221.1 COG0845 Membrane-fusion protein YP_008170222.1 COG1538 Outer membrane protein YP_008170224.1 COG1230 Co/Zn/Cd efflux system component YP_008170225.1 COG0789 Predicted transcriptional regulators YP_008170226.1 COG2963 Transposase and inactivated derivatives YP_008170227.1 COG2801 Transposase and inactivated derivatives YP_008170228.1 COG4823 Abortive infection bacteriophage resistance protein YP_008170230.1 COG2200 FOG: EAL domain YP_008170231.1 COG0583 Transcriptional regulator YP_008170232.1 COG1279 Lysine efflux permease YP_008170233.1 COG2076 Membrane transporters of cations and cationic drugs YP_008170234.1 COG4446 Uncharacterized protein conserved in bacteria YP_008170235.1 COG2214 DnaJ-class molecular chaperone YP_008170236.1 COG0845 Membrane-fusion protein YP_008170237.1 COG0841 Cation/multidrug efflux pump YP_008170238.1 COG3150 Predicted esterase YP_008170239.1 COG0427 Acetyl-CoA hydrolase YP_008170240.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_008170241.1 COG0695 Glutaredoxin and related proteins YP_008170243.1 COG0840 Methyl-accepting chemotaxis protein YP_008170244.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008170246.1 COG0807 GTP cyclohydrolase II YP_008170247.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008170249.1 COG0625 Glutathione S-transferase YP_008170250.1 COG0514 Superfamily II DNA helicase YP_008170251.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_008170252.1 COG2962 Predicted permeases YP_008170253.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008170254.1 COG0210 Superfamily I DNA and RNA helicases YP_008170255.1 COG1045 Serine acetyltransferase YP_008170256.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008170257.1 COG4973 Site-specific recombinase XerC YP_008170258.1 COG3159 Uncharacterized protein conserved in bacteria YP_008170259.1 COG0253 Diaminopimelate epimerase YP_008170260.1 COG0019 Diaminopimelate decarboxylase YP_008170262.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_008170263.1 COG0671 Membrane-associated phospholipid phosphatase YP_008170264.1 COG0684 Demethylmenaquinone methyltransferase YP_008170265.1 COG4421 Capsular polysaccharide biosynthesis protein YP_008170266.1 COG3866 Pectate lyase YP_008170268.1 COG1835 Predicted acyltransferases YP_008170269.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008170270.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_008170271.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_008170272.1 COG0158 Fructose-1,6-bisphosphatase YP_008170274.1 COG0221 Inorganic pyrophosphatase YP_008170275.1 COG3495 Uncharacterized protein conserved in bacteria YP_008170277.1 COG0824 Predicted thioesterase YP_008170278.1 COG0443 Molecular chaperone YP_008170280.1 COG0178 Excinuclease ATPase subunit YP_008170281.1 COG0477 Permeases of the major facilitator superfamily YP_008170282.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008170284.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008170286.1 COG1609 Transcriptional regulators YP_008170287.1 COG2017 Galactose mutarotase and related enzymes YP_008170288.1 COG1085 Galactose-1-phosphate uridylyltransferase YP_008170289.1 COG0153 Galactokinase YP_008170290.1 COG4146 Predicted symporter YP_008170291.1 COG0629 Single-stranded DNA-binding protein YP_008170293.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_008170294.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008170296.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008170298.1 COG0554 Glycerol kinase YP_008170299.1 COG1349 Transcriptional regulators of sugar metabolism YP_008170300.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_008170307.1 COG1450 Type II secretory pathway, component PulD YP_008170308.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008170309.1 COG0457 FOG: TPR repeat YP_008170310.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008170311.1 COG1459 Type II secretory pathway, component PulF YP_008170316.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008170320.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_008170321.1 COG1792 Cell shape-determining protein YP_008170322.1 COG2891 Cell shape-determining protein YP_008170323.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_008170324.1 COG1530 Ribonucleases G and E YP_008170325.1 COG3164 Predicted membrane protein YP_008170326.1 COG0388 Predicted amidohydrolase YP_008170327.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008170328.1 COG3028 Uncharacterized protein conserved in bacteria YP_008170329.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008170330.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008170331.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008170332.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008170333.1 COG0642 Signal transduction histidine kinase YP_008170334.1 COG0297 Glycogen synthase YP_008170335.1 COG2813 16S RNA G1207 methylase RsmC YP_008170336.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_008170337.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008170338.1 COG1194 A/G-specific DNA glycosylase YP_008170339.1 COG2924 Fe-S cluster protector protein YP_008170340.1 COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_008170341.1 COG1483 Predicted ATPase (AAA+ superfamily) YP_008170342.1 COG1743 Adenine-specific DNA methylase containing a Zn-ribbon YP_008170343.1 COG3019 Predicted metal-binding protein YP_008170344.1 COG0223 Methionyl-tRNA formyltransferase YP_008170345.1 COG0642 Signal transduction histidine kinase YP_008170346.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008170347.1 COG3019 Predicted metal-binding protein YP_008170348.1 COG1538 Outer membrane protein YP_008170349.1 COG0845 Membrane-fusion protein YP_008170350.1 COG3696 Putative silver efflux pump YP_008170353.1 COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC YP_008170354.1 COG1276 Putative copper export protein YP_008170356.1 COG4319 Ketosteroid isomerase homolog YP_008170357.1 COG3503 Predicted membrane protein YP_008170359.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_008170360.1 COG2857 Cytochrome c1 YP_008170364.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_008170368.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_008170370.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_008170371.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_008170373.1 COG0298 Hydrogenase maturation factor YP_008170374.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_008170375.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_008170376.1 COG0409 Hydrogenase maturation factor YP_008170377.1 COG0068 Hydrogenase maturation factor YP_008170378.1 COG0309 Hydrogenase maturation factor YP_008170379.1 COG0789 Predicted transcriptional regulators YP_008170380.1 COG2217 Cation transport ATPase YP_008170381.1 COG4633 Uncharacterized protein conserved in bacteria YP_008170383.1 COG2020 Putative protein-S-isoprenylcysteine methyltransferase YP_008170387.1 COG2801 Transposase and inactivated derivatives YP_008170393.1 COG1538 Outer membrane protein YP_008170394.1 COG0845 Membrane-fusion protein YP_008170395.1 COG3696 Putative silver efflux pump YP_008170396.1 COG1230 Co/Zn/Cd efflux system component YP_008170398.1 COG0818 Diacylglycerol kinase YP_008170399.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_008170400.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_008170401.1 COG0398 Uncharacterized conserved protein YP_008170402.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008170403.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008170404.1 COG0642 Signal transduction histidine kinase YP_008170405.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008170408.1 COG3696 Putative silver efflux pump YP_008170409.1 COG0845 Membrane-fusion protein YP_008170410.1 COG1538 Outer membrane protein YP_008170411.1 COG0501 Zn-dependent protease with chaperone function YP_008170412.1 COG3682 Predicted transcriptional regulator YP_008170413.1 COG0582 Integrase YP_008170415.1 COG3436 Transposase and inactivated derivatives YP_008170417.1 COG0531 Amino acid transporters YP_008170418.1 COG3667 Uncharacterized protein involved in copper resistance YP_008170419.1 COG2132 Putative multicopper oxidases YP_008170420.1 COG0695 Glutaredoxin and related proteins YP_008170421.1 COG3544 Uncharacterized protein conserved in bacteria YP_008170423.1 COG0582 Integrase YP_008170424.1 COG0840 Methyl-accepting chemotaxis protein YP_008170425.1 COG0784 FOG: CheY-like receiver YP_008170426.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008170427.1 COG0835 Chemotaxis signal transduction protein YP_008170428.1 COG2202 FOG: PAS/PAC domain YP_008170429.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008170430.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_008170431.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008170432.1 COG0840 Methyl-accepting chemotaxis protein YP_008170433.1 COG0784 FOG: CheY-like receiver YP_008170434.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008170435.1 COG0835 Chemotaxis signal transduction protein YP_008170436.1 COG2202 FOG: PAS/PAC domain YP_008170437.1 COG2202 FOG: PAS/PAC domain YP_008170438.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008170439.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_008170440.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008170442.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008170443.1 COG2199 FOG: GGDEF domain YP_008170444.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008170445.1 COG0546 Predicted phosphatases YP_008170447.1 COG0642 Signal transduction histidine kinase YP_008170449.1 COG1082 Sugar phosphate isomerases/epimerases YP_008170450.1 COG1609 Transcriptional regulators YP_008170451.1 COG0673 Predicted dehydrogenases and related proteins YP_008170452.1 COG1082 Sugar phosphate isomerases/epimerases YP_008170453.1 COG0477 Permeases of the major facilitator superfamily YP_008170454.1 COG3622 Hydroxypyruvate isomerase YP_008170455.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008170456.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008170458.1 COG1454 Alcohol dehydrogenase, class IV YP_008170459.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008170460.1 COG0588 Phosphoglycerate mutase 1 YP_008170461.1 COG3542 Uncharacterized conserved protein YP_008170462.1 COG1048 Aconitase A YP_008170463.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008170464.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008170465.1 COG0051 Ribosomal protein S10 YP_008170466.1 COG0087 Ribosomal protein L3 YP_008170467.1 COG0088 Ribosomal protein L4 YP_008170468.1 COG0089 Ribosomal protein L23 YP_008170469.1 COG0090 Ribosomal protein L2 YP_008170470.1 COG0185 Ribosomal protein S19 YP_008170471.1 COG0091 Ribosomal protein L22 YP_008170472.1 COG0092 Ribosomal protein S3 YP_008170473.1 COG0197 Ribosomal protein L16/L10E YP_008170474.1 COG0255 Ribosomal protein L29 YP_008170475.1 COG0186 Ribosomal protein S17 YP_008170476.1 COG0438 Glycosyltransferase YP_008170477.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008170478.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_008170479.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_008170482.1 COG0840 Methyl-accepting chemotaxis protein YP_008170483.1 COG0339 Zn-dependent oligopeptidases YP_008170485.1 COG0788 Formyltetrahydrofolate hydrolase YP_008170486.1 COG1514 2'-5' RNA ligase YP_008170487.1 COG1643 HrpA-like helicases YP_008170488.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008170489.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_008170492.1 COG2354 Uncharacterized protein conserved in bacteria YP_008170493.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008170495.1 COG0347 Nitrogen regulatory protein PII YP_008170496.1 COG0004 Ammonia permease YP_008170497.1 COG0405 Gamma-glutamyltransferase YP_008170498.1 COG2837 Predicted iron-dependent peroxidase YP_008170499.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_008170500.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_008170501.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_008170502.1 COG1309 Transcriptional regulator YP_008170503.1 COG0845 Membrane-fusion protein YP_008170504.1 COG0841 Cation/multidrug efflux pump YP_008170506.1 COG0642 Signal transduction histidine kinase YP_008170507.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008170510.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008170511.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit YP_008170512.1 COG4992 Ornithine/acetylornithine aminotransferase YP_008170514.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_008170515.1 COG0180 Tryptophanyl-tRNA synthetase YP_008170516.1 COG0036 Pentose-5-phosphate-3-epimerase YP_008170520.1 COG0338 Site-specific DNA methylase YP_008170521.1 COG3266 Uncharacterized protein conserved in bacteria YP_008170522.1 COG0337 3-dehydroquinate synthetase YP_008170523.1 COG0703 Shikimate kinase YP_008170524.1 COG4796 Type II secretory pathway, component HofQ YP_008170525.1 COG3168 Tfp pilus assembly protein PilP YP_008170526.1 COG3167 Tfp pilus assembly protein PilO YP_008170527.1 COG3166 Tfp pilus assembly protein PilN YP_008170528.1 COG4972 Tfp pilus assembly protein, ATPase PilM YP_008170529.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_008170530.1 COG0281 Malic enzyme YP_008170532.1 COG0625 Glutathione S-transferase YP_008170534.1 COG0753 Catalase YP_008170535.1 COG1309 Transcriptional regulator YP_008170536.1 COG4757 Predicted alpha/beta hydrolase YP_008170537.1 COG2202 FOG: PAS/PAC domain YP_008170538.1 COG0548 Acetylglutamate kinase YP_008170539.1 COG0165 Argininosuccinate lyase YP_008170540.1 COG0137 Argininosuccinate synthase YP_008170541.1 COG0078 Ornithine carbamoyltransferase YP_008170542.1 COG0548 Acetylglutamate kinase YP_008170543.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_008170544.1 COG1803 Methylglyoxal synthase YP_008170546.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008170547.1 COG0642 Signal transduction histidine kinase YP_008170548.1 COG2267 Lysophospholipase YP_008170549.1 COG0219 Predicted rRNA methylase (SpoU class) YP_008170551.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_008170552.1 COG1952 Preprotein translocase subunit SecB YP_008170553.1 COG0695 Glutaredoxin and related proteins YP_008170554.1 COG0607 Rhodanese-related sulfurtransferase YP_008170555.1 COG4942 Membrane-bound metallopeptidase YP_008170556.1 COG2861 Uncharacterized protein conserved in bacteria YP_008170558.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_008170559.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008170560.1 COG0688 Phosphatidylserine decarboxylase YP_008170561.1 COG1162 Predicted GTPases YP_008170562.1 COG1949 Oligoribonuclease (3'->5' exoribonuclease) YP_008170563.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008170565.1 COG3085 Uncharacterized protein conserved in bacteria YP_008170566.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008170567.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_008170569.1 COG1826 Sec-independent protein secretion pathway components YP_008170570.1 COG1826 Sec-independent protein secretion pathway components YP_008170571.1 COG0805 Sec-independent protein secretion pathway component TatC YP_008170573.1 COG0084 Mg-dependent DNase YP_008170574.1 COG2199 FOG: GGDEF domain YP_008170575.1 COG0113 Delta-aminolevulinic acid dehydratase YP_008170576.1 COG0248 Exopolyphosphatase YP_008170577.1 COG0513 Superfamily II DNA and RNA helicases YP_008170578.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008170579.1 COG1158 Transcription termination factor YP_008170580.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_008170581.1 COG0642 Signal transduction histidine kinase YP_008170582.1 COG3004 Na+/H+ antiporter YP_008170583.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_008170584.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_008170585.1 COG2847 Uncharacterized protein conserved in bacteria YP_008170586.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_008170587.1 COG2133 Glucose/sorbosone dehydrogenases YP_008170588.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008170589.1 COG4323 Predicted membrane protein YP_008170590.1 COG3118 Thioredoxin domain-containing protein YP_008170592.1 COG0520 Selenocysteine lyase YP_008170593.1 COG3242 Uncharacterized protein conserved in bacteria YP_008170594.1 COG0104 Adenylosuccinate synthase YP_008170595.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008170596.1 COG3565 Predicted dioxygenase of extradiol dioxygenase family YP_008170597.1 COG1432 Uncharacterized conserved protein YP_008170598.1 COG0405 Gamma-glutamyltransferase YP_008170599.1 COG1757 Na+/H+ antiporter YP_008170600.1 COG1472 Beta-glucosidase-related glycosidases YP_008170601.1 COG0668 Small-conductance mechanosensitive channel YP_008170602.1 COG3876 Uncharacterized protein conserved in bacteria YP_008170603.1 COG2103 Predicted sugar phosphate isomerase YP_008170604.1 COG0787 Alanine racemase YP_008170605.1 COG1284 Uncharacterized conserved protein YP_008170607.1 COG0346 Lactoylglutathione lyase and related lyases YP_008170609.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008170610.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_008170612.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_008170613.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008170614.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008170615.1 COG1569 Predicted nucleic acid-binding protein, contains PIN domain YP_008170618.1 COG3093 Plasmid maintenance system antidote protein YP_008170619.1 COG3549 Plasmid maintenance system killer protein YP_008170620.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008170621.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008170624.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008170627.1 COG0833 Amino acid transporters YP_008170629.1 COG3547 Transposase and inactivated derivatives YP_008170633.1 COG0841 Cation/multidrug efflux pump YP_008170636.1 COG0582 Integrase YP_008170638.1 COG3809 Uncharacterized protein conserved in bacteria YP_008170642.1 COG0582 Integrase YP_008170644.1 COG1432 Uncharacterized conserved protein YP_008170646.1 COG3547 Transposase and inactivated derivatives YP_008170648.1 COG1814 Uncharacterized membrane protein YP_008170650.1 COG1733 Predicted transcriptional regulators YP_008170651.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008170652.1 COG5331 Uncharacterized protein conserved in bacteria YP_008170653.1 COG0457 FOG: TPR repeat YP_008170655.1 COG3344 Retron-type reverse transcriptase YP_008170656.1 COG3436 Transposase and inactivated derivatives YP_008170657.1 COG3587 Restriction endonuclease YP_008170658.1 COG2189 Adenine specific DNA methylase Mod YP_008170660.1 COG3605 Signal transduction protein containing GAF and PtsI domains YP_008170661.1 COG0730 Predicted permeases YP_008170662.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_008170663.1 COG0207 Thymidylate synthase YP_008170664.1 COG0784 FOG: CheY-like receiver YP_008170665.1 COG2199 FOG: GGDEF domain YP_008170666.1 COG0477 Permeases of the major facilitator superfamily YP_008170669.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008170670.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_008170672.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008170673.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_008170675.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_008170676.1 COG0513 Superfamily II DNA and RNA helicases YP_008170677.1 COG0457 FOG: TPR repeat YP_008170678.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008170680.1 COG1538 Outer membrane protein YP_008170681.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008170682.1 COG3151 Uncharacterized protein conserved in bacteria YP_008170683.1 COG1409 Predicted phosphohydrolases YP_008170684.1 COG3150 Predicted esterase YP_008170685.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008170687.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008170688.1 COG5544 Predicted periplasmic lipoprotein YP_008170692.1 COG1509 Lysine 2,3-aminomutase YP_008170693.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_008170694.1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) YP_008170695.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008170697.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008170698.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008170699.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_008170700.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008170701.1 COG2813 16S RNA G1207 methylase RsmC YP_008170702.1 COG3145 Alkylated DNA repair protein YP_008170703.1 COG0271 Stress-induced morphogen (activity unknown) YP_008170704.1 COG0671 Membrane-associated phospholipid phosphatase YP_008170705.1 COG3575 Uncharacterized protein conserved in bacteria YP_008170706.1 COG3707 Response regulator with putative antiterminator output domain YP_008170709.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008170710.1 COG1251 NAD(P)H-nitrite reductase YP_008170711.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_008170712.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008170713.1 COG0007 Uroporphyrinogen-III methylase YP_008170714.1 COG0547 Anthranilate phosphoribosyltransferase YP_008170715.1 COG2202 FOG: PAS/PAC domain YP_008170716.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_008170717.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_008170718.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_008170720.1 COG1896 Predicted hydrolases of HD superfamily YP_008170721.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008170722.1 COG4206 Outer membrane cobalamin receptor protein YP_008170723.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_008170724.1 COG0348 Polyferredoxin YP_008170726.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008170727.1 COG1960 Acyl-CoA dehydrogenases YP_008170728.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008170729.1 COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_008170730.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_008170731.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_008170732.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008170733.1 COG0845 Membrane-fusion protein YP_008170734.1 COG0841 Cation/multidrug efflux pump YP_008170737.1 COG0840 Methyl-accepting chemotaxis protein YP_008170738.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008170739.1 COG0358 DNA primase (bacterial type) YP_008170740.1 COG1610 Uncharacterized conserved protein YP_008170742.1 COG0828 Ribosomal protein S21 YP_008170743.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_008170744.1 COG1524 Uncharacterized proteins of the AP superfamily YP_008170745.1 COG0344 Predicted membrane protein YP_008170746.1 COG1539 Dihydroneopterin aldolase YP_008170747.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008170748.1 COG1968 Uncharacterized bacitracin resistance protein YP_008170749.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_008170751.1 COG1639 Predicted signal transduction protein YP_008170752.1 COG3135 Uncharacterized protein involved in benzoate metabolism YP_008170753.1 COG1396 Predicted transcriptional regulators YP_008170754.1 COG2974 DNA recombination-dependent growth factor C YP_008170755.1 COG0642 Signal transduction histidine kinase YP_008170756.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008170757.1 COG0642 Signal transduction histidine kinase YP_008170758.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008170760.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008170762.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_008170763.1 COG0811 Biopolymer transport proteins YP_008170764.1 COG0848 Biopolymer transport protein YP_008170765.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008170766.1 COG0457 FOG: TPR repeat YP_008170767.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008170768.1 COG0642 Signal transduction histidine kinase YP_008170769.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008170770.1 COG0591 Na+/proline symporter YP_008170771.1 COG2133 Glucose/sorbosone dehydrogenases YP_008170772.1 COG1049 Aconitase B YP_008170774.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008170775.1 COG0775 Nucleoside phosphorylase YP_008170777.1 COG1793 ATP-dependent DNA ligase YP_008170778.1 COG1049 Aconitase B YP_008170779.1 COG1430 Uncharacterized conserved protein YP_008170780.1 COG0527 Aspartokinases YP_008170781.1 COG0840 Methyl-accepting chemotaxis protein YP_008170782.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_008170783.1 COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport YP_008170784.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_008170785.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_008170786.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008170787.1 COG1452 Organic solvent tolerance protein OstA YP_008170788.1 COG1076 DnaJ-domain-containing proteins 1 YP_008170789.1 COG4974 Site-specific recombinase XerD YP_008170790.1 COG1651 Protein-disulfide isomerase YP_008170791.1 COG0608 Single-stranded DNA-specific exonuclease YP_008170793.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_008170794.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_008170795.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_008170796.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008170797.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008170798.1 COG1694 Predicted pyrophosphatase YP_008170799.1 COG2832 Uncharacterized protein conserved in bacteria YP_008170800.1 COG1257 Hydroxymethylglutaryl-CoA reductase YP_008170801.1 COG0457 FOG: TPR repeat YP_008170803.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008170805.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008170807.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_008170808.1 COG0398 Uncharacterized conserved protein YP_008170809.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008170811.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_008170813.1 COG0642 Signal transduction histidine kinase YP_008170814.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008170816.1 COG0102 Ribosomal protein L13 YP_008170817.1 COG0103 Ribosomal protein S9 YP_008170818.1 COG0723 Rieske Fe-S protein YP_008170819.1 COG1290 Cytochrome b subunit of the bc complex YP_008170820.1 COG2857 Cytochrome c1 YP_008170821.1 COG0625 Glutathione S-transferase YP_008170822.1 COG2969 Stringent starvation protein B YP_008170823.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_008170824.1 COG1925 Phosphotransferase system, HPr-related proteins YP_008170825.1 COG1660 Predicted P-loop-containing kinase YP_008170826.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_008170827.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_008170828.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_008170829.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_008170830.1 COG1934 Uncharacterized protein conserved in bacteria YP_008170831.1 COG3117 Uncharacterized protein conserved in bacteria YP_008170832.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_008170833.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_008170834.1 COG0530 Ca2+/Na+ antiporter YP_008170835.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_008170836.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_008170837.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_008170838.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_008170839.1 COG3113 Predicted NTP binding protein (contains STAS domain) YP_008170840.1 COG5007 Predicted transcriptional regulator, BolA superfamily YP_008170841.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_008170842.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008170843.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008170845.1 COG1485 Predicted ATPase YP_008170846.1 COG0217 Uncharacterized conserved protein YP_008170847.1 COG2346 Truncated hemoglobins YP_008170851.1 COG0342 Preprotein translocase subunit SecD YP_008170852.1 COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain YP_008170853.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008170854.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008170856.1 COG2202 FOG: PAS/PAC domain YP_008170857.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_008170860.1 COG0192 S-adenosylmethionine synthetase YP_008170861.1 COG0021 Transketolase YP_008170862.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008170863.1 COG0126 3-phosphoglycerate kinase YP_008170864.1 COG3588 Fructose-1,6-bisphosphate aldolase YP_008170866.1 COG0845 Membrane-fusion protein YP_008170867.1 COG1538 Outer membrane protein YP_008170868.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008170869.1 COG0248 Exopolyphosphatase YP_008170870.1 COG0855 Polyphosphate kinase YP_008170871.1 COG2716 Glycine cleavage system regulatory protein YP_008170872.1 COG4590 ABC-type uncharacterized transport system, permease component YP_008170873.1 COG0581 ABC-type phosphate transport system, permease component YP_008170874.1 COG1117 ABC-type phosphate transport system, ATPase component YP_008170875.1 COG0704 Phosphate uptake regulator YP_008170876.1 COG0306 Phosphate/sulphate permeases YP_008170877.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008170878.1 COG0583 Transcriptional regulator YP_008170880.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_008170881.1 COG1846 Transcriptional regulators YP_008170882.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_008170883.1 COG0308 Aminopeptidase N YP_008170884.1 COG1225 Peroxiredoxin YP_008170885.1 COG1739 Uncharacterized conserved protein YP_008170887.1 COG0420 DNA repair exonuclease YP_008170888.1 COG0419 ATPase involved in DNA repair YP_008170889.1 COG0793 Periplasmic protease YP_008170890.1 COG3633 Na+/serine symporter YP_008170891.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_008170892.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_008170893.1 COG2188 Transcriptional regulators YP_008170894.1 COG2987 Urocanate hydratase YP_008170895.1 COG2986 Histidine ammonia-lyase YP_008170896.1 COG3045 Uncharacterized protein conserved in bacteria YP_008170898.1 COG3713 Outer membrane protein V YP_008170901.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008170903.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_008170904.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008170906.1 COG0668 Small-conductance mechanosensitive channel YP_008170908.1 COG0477 Permeases of the major facilitator superfamily YP_008170909.1 COG0582 Integrase YP_008170911.1 COG1222 ATP-dependent 26S proteasome regulatory subunit YP_008170913.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008170915.1 COG3279 Response regulator of the LytR/AlgR family YP_008170917.1 COG1346 Putative effector of murein hydrolase YP_008170918.1 COG0784 FOG: CheY-like receiver YP_008170919.1 COG2202 FOG: PAS/PAC domain YP_008170923.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008170924.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_008170925.1 COG0513 Superfamily II DNA and RNA helicases YP_008170926.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_008170927.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008170929.1 COG2206 HD-GYP domain YP_008170930.1 COG0066 3-isopropylmalate dehydratase small subunit YP_008170931.1 COG0065 3-isopropylmalate dehydratase large subunit YP_008170932.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_008170933.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008170935.1 COG0148 Enolase YP_008170936.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_008170937.1 COG0249 Mismatch repair ATPase (MutS family) YP_008170938.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_008170939.1 COG0468 RecA/RadA recombinase YP_008170940.1 COG4555 ABC-type Na+ transport system, ATPase component YP_008170941.1 COG1668 ABC-type Na+ efflux pump, permease component YP_008170942.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_008170944.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_008170945.1 COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_008170946.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_008170947.1 COG3114 Heme exporter protein D YP_008170948.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_008170949.1 COG1138 Cytochrome c biogenesis factor YP_008170950.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008170951.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes YP_008170952.1 COG4235 Cytochrome c biogenesis factor YP_008170953.1 COG2853 Surface lipoprotein YP_008170954.1 COG1087 UDP-glucose 4-epimerase YP_008170956.1 COG3104 Dipeptide/tripeptide permease YP_008170957.1 COG3524 Capsule polysaccharide export protein YP_008170958.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_008170959.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_008170960.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008170962.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_008170963.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008170964.1 COG1216 Predicted glycosyltransferases YP_008170965.1 COG1210 UDP-glucose pyrophosphorylase YP_008170966.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_008170967.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_008170969.1 COG2913 Small protein A (tmRNA-binding) YP_008170970.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_008170971.1 COG2199 FOG: GGDEF domain YP_008170972.1 COG2904 Uncharacterized protein conserved in bacteria YP_008170976.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008170979.1 COG3098 Uncharacterized protein conserved in bacteria YP_008170980.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008170981.1 COG0716 Flavodoxins YP_008170982.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_008170983.1 COG2844 UTP:GlnB (protein PII) uridylyltransferase YP_008170984.1 COG0024 Methionine aminopeptidase YP_008170985.1 COG0052 Ribosomal protein S2 YP_008170986.1 COG0264 Translation elongation factor Ts YP_008170987.1 COG0528 Uridylate kinase YP_008170988.1 COG0233 Ribosome recycling factor YP_008170989.1 COG0020 Undecaprenyl pyrophosphate synthase YP_008170990.1 COG0575 CDP-diglyceride synthetase YP_008170991.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_008170992.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_008170993.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_008170994.1 COG2825 Outer membrane protein YP_008170995.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008170996.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_008170997.1 COG0763 Lipid A disaccharide synthetase YP_008170998.1 COG0164 Ribonuclease HII YP_008170999.1 COG0587 DNA polymerase III, alpha subunit YP_008171000.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_008171001.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_008171002.1 COG2199 FOG: GGDEF domain YP_008171003.1 COG0475 Kef-type K+ transport systems, membrane components YP_008171005.1 COG0590 Cytosine/adenosine deaminases YP_008171007.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_008171008.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_008171010.1 COG2840 Uncharacterized protein conserved in bacteria YP_008171016.1 COG0582 Integrase YP_008171017.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008171019.1 COG2608 Copper chaperone YP_008171021.1 COG0789 Predicted transcriptional regulators YP_008171026.1 COG3209 Rhs family protein YP_008171027.1 COG3209 Rhs family protein YP_008171028.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008171029.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008171030.1 COG0845 Membrane-fusion protein YP_008171031.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008171032.1 COG2200 FOG: EAL domain YP_008171035.1 COG3018 Uncharacterized protein conserved in bacteria YP_008171037.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_008171038.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_008171039.1 COG0835 Chemotaxis signal transduction protein YP_008171040.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008171041.1 COG1815 Flagellar basal body protein YP_008171042.1 COG1558 Flagellar basal body rod protein YP_008171043.1 COG1843 Flagellar hook capping protein YP_008171044.1 COG1749 Flagellar hook protein FlgE YP_008171045.1 COG4787 Flagellar basal body rod protein YP_008171046.1 COG4786 Flagellar basal body rod protein YP_008171047.1 COG2063 Flagellar basal body L-ring protein YP_008171048.1 COG1706 Flagellar basal-body P-ring protein YP_008171049.1 COG3951 Rod binding protein YP_008171050.1 COG1256 Flagellar hook-associated protein YP_008171051.1 COG1344 Flagellin and related hook-associated proteins YP_008171053.1 COG1344 Flagellin and related hook-associated proteins YP_008171054.1 COG1344 Flagellin and related hook-associated proteins YP_008171055.1 COG1344 Flagellin and related hook-associated proteins YP_008171056.1 COG1334 Uncharacterized flagellar protein FlaG YP_008171057.1 COG1345 Flagellar capping protein YP_008171058.1 COG1516 Flagellin-specific chaperone FliS YP_008171060.1 COG2604 Uncharacterized protein conserved in bacteria YP_008171061.1 COG0500 SAM-dependent methyltransferases YP_008171062.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008171063.1 COG2089 Sialic acid synthase YP_008171064.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_008171065.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_008171066.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_008171067.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_008171068.1 COG1344 Flagellin and related hook-associated proteins YP_008171069.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008171070.1 COG0642 Signal transduction histidine kinase YP_008171071.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008171072.1 COG1677 Flagellar hook-basal body protein YP_008171073.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_008171074.1 COG1536 Flagellar motor switch protein YP_008171075.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_008171076.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_008171077.1 COG2882 Flagellar biosynthesis chaperone YP_008171078.1 COG3144 Flagellar hook-length control protein YP_008171079.1 COG1580 Flagellar basal body-associated protein YP_008171080.1 COG1868 Flagellar motor switch protein YP_008171081.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_008171082.1 COG3190 Flagellar biogenesis protein YP_008171083.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_008171084.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_008171085.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_008171086.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_008171087.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_008171088.1 COG1419 Flagellar GTP-binding protein YP_008171089.1 COG0455 ATPases involved in chromosome partitioning YP_008171090.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_008171091.1 COG0784 FOG: CheY-like receiver YP_008171092.1 COG3143 Chemotaxis protein YP_008171093.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008171094.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008171095.1 COG1192 ATPases involved in chromosome partitioning YP_008171096.1 COG0835 Chemotaxis signal transduction protein YP_008171097.1 COG0835 Chemotaxis signal transduction protein YP_008171099.1 COG1897 Homoserine trans-succinylase YP_008171100.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_008171101.1 COG1410 Methionine synthase I, cobalamin-binding domain YP_008171103.1 COG3123 Uncharacterized protein conserved in bacteria YP_008171104.1 COG0583 Transcriptional regulator YP_008171105.1 COG0583 Transcriptional regulator YP_008171106.1 COG0288 Carbonic anhydrase YP_008171107.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008171108.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171109.1 COG1309 Transcriptional regulator YP_008171110.1 COG3590 Predicted metalloendopeptidase YP_008171111.1 COG3146 Uncharacterized protein conserved in bacteria YP_008171112.1 COG2137 Uncharacterized protein conserved in bacteria YP_008171113.1 COG0013 Alanyl-tRNA synthetase YP_008171114.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_008171116.1 COG3630 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit YP_008171117.1 COG5016 Pyruvate/oxaloacetate carboxyltransferase YP_008171118.1 COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit YP_008171119.1 COG4167 ABC-type antimicrobial peptide transport system, ATPase component YP_008171120.1 COG4170 ABC-type antimicrobial peptide transport system, ATPase component YP_008171121.1 COG4171 ABC-type antimicrobial peptide transport system, permease component YP_008171122.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008171123.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_008171124.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_008171125.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008171127.1 COG1983 Putative stress-responsive transcriptional regulator YP_008171128.1 COG3186 Phenylalanine-4-hydroxylase YP_008171129.1 COG3283 Transcriptional regulator of aromatic amino acids metabolism YP_008171130.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_008171131.1 COG0625 Glutathione S-transferase YP_008171132.1 COG1522 Transcriptional regulators YP_008171133.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_008171136.1 COG3483 Tryptophan 2,3-dioxygenase (vermilion) YP_008171137.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171138.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171141.1 COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_008171142.1 COG0457 FOG: TPR repeat YP_008171143.1 COG3751 Predicted proline hydroxylase YP_008171144.1 COG3751 Predicted proline hydroxylase YP_008171146.1 COG0811 Biopolymer transport proteins YP_008171147.1 COG0811 Biopolymer transport proteins YP_008171148.1 COG0848 Biopolymer transport protein YP_008171149.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008171150.1 COG0457 FOG: TPR repeat YP_008171151.1 COG1444 Predicted P-loop ATPase fused to an acetyltransferase YP_008171152.1 COG1607 Acyl-CoA hydrolase YP_008171153.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171155.1 COG3201 Nicotinamide mononucleotide transporter YP_008171156.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_008171158.1 COG0456 Acetyltransferases YP_008171159.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008171160.1 COG0583 Transcriptional regulator YP_008171161.1 COG2814 Arabinose efflux permease YP_008171162.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008171163.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_008171165.1 COG1566 Multidrug resistance efflux pump YP_008171166.1 COG1846 Transcriptional regulators YP_008171167.1 COG4734 Antirestriction protein YP_008171170.1 COG4108 Peptide chain release factor RF-3 YP_008171171.1 COG0018 Arginyl-tRNA synthetase YP_008171172.1 COG0431 Predicted flavoprotein YP_008171175.1 COG0031 Cysteine synthase YP_008171176.1 COG0464 ATPases of the AAA+ class YP_008171177.1 COG3292 Predicted periplasmic ligand-binding sensor domain YP_008171178.1 COG3059 Predicted membrane protein YP_008171180.1 COG4852 Predicted membrane protein YP_008171181.1 COG3239 Fatty acid desaturase YP_008171182.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_008171184.1 COG1186 Protein chain release factor B YP_008171185.1 COG1190 Lysyl-tRNA synthetase (class II) YP_008171186.1 COG1893 Ketopantoate reductase YP_008171187.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008171188.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008171189.1 COG0612 Predicted Zn-dependent peptidases YP_008171190.1 COG2918 Gamma-glutamylcysteine synthetase YP_008171191.1 COG4764 Uncharacterized protein conserved in bacteria YP_008171193.1 COG0753 Catalase YP_008171195.1 COG2840 Uncharacterized protein conserved in bacteria YP_008171196.1 COG2890 Methylase of polypeptide chain release factors YP_008171197.1 COG0082 Chorismate synthase YP_008171198.1 COG0477 Permeases of the major facilitator superfamily YP_008171199.1 COG2719 Uncharacterized conserved protein YP_008171200.1 COG2718 Uncharacterized conserved protein YP_008171201.1 COG2766 Putative Ser protein kinase YP_008171202.1 COG0605 Superoxide dismutase YP_008171203.1 COG0278 Glutaredoxin-related protein YP_008171204.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171205.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008171206.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008171207.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171208.1 COG2906 Bacterioferritin-associated ferredoxin YP_008171209.1 COG0450 Peroxiredoxin YP_008171210.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008171211.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008171212.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_008171213.1 COG0346 Lactoylglutathione lyase and related lyases YP_008171214.1 COG1278 Cold shock proteins YP_008171216.1 COG2234 Predicted aminopeptidases YP_008171217.1 COG0177 Predicted EndoIII-related endonuclease YP_008171218.1 COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE YP_008171219.1 COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG YP_008171220.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD YP_008171221.1 COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC YP_008171222.1 COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB YP_008171223.1 COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA YP_008171224.1 COG0534 Na+-driven multidrug efflux pump YP_008171225.1 COG0556 Helicase subunit of the DNA excision repair complex YP_008171226.1 COG0583 Transcriptional regulator YP_008171227.1 COG0603 Predicted PP-loop superfamily ATPase YP_008171228.1 COG0602 Organic radical activating enzymes YP_008171230.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_008171231.1 COG1723 Uncharacterized conserved protein YP_008171232.1 COG2234 Predicted aminopeptidases YP_008171235.1 COG0471 Di- and tricarboxylate transporters YP_008171236.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1 YP_008171237.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_008171238.1 COG0529 Adenylylsulfate kinase and related kinases YP_008171239.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008171240.1 COG0591 Na+/proline symporter YP_008171241.1 COG2199 FOG: GGDEF domain YP_008171243.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008171244.1 COG4805 Uncharacterized protein conserved in bacteria YP_008171246.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008171247.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008171249.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008171250.1 COG0714 MoxR-like ATPases YP_008171251.1 COG0183 Acetyl-CoA acetyltransferase YP_008171252.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008171255.1 COG2202 FOG: PAS/PAC domain YP_008171256.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_008171257.1 COG2062 Phosphohistidine phosphatase SixA YP_008171259.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_008171260.1 COG4137 ABC-type uncharacterized transport system, permease component YP_008171261.1 COG0541 Signal recognition particle GTPase YP_008171263.1 COG1196 Chromosome segregation ATPases YP_008171265.1 COG0515 Serine/threonine protein kinase YP_008171267.1 COG2267 Lysophospholipase YP_008171268.1 COG0841 Cation/multidrug efflux pump YP_008171269.1 COG0845 Membrane-fusion protein YP_008171270.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008171273.1 COG0228 Ribosomal protein S16 YP_008171274.1 COG0806 RimM protein, required for 16S rRNA processing YP_008171275.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_008171276.1 COG0335 Ribosomal protein L19 YP_008171277.1 COG2860 Predicted membrane protein YP_008171278.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008171279.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008171280.1 COG1605 Chorismate mutase YP_008171281.1 COG1605 Chorismate mutase YP_008171282.1 COG0784 FOG: CheY-like receiver YP_008171283.1 COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins YP_008171284.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_008171285.1 COG0784 FOG: CheY-like receiver YP_008171286.1 COG4103 Uncharacterized protein conserved in bacteria YP_008171287.1 COG2199 FOG: GGDEF domain YP_008171289.1 COG0642 Signal transduction histidine kinase YP_008171290.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_008171291.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008171292.1 COG1344 Flagellin and related hook-associated proteins YP_008171293.1 COG2203 FOG: GAF domain YP_008171294.1 COG1801 Uncharacterized conserved protein YP_008171295.1 COG0173 Aspartyl-tRNA synthetase YP_008171296.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008171297.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_008171298.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_008171299.1 COG2255 Holliday junction resolvasome, helicase subunit YP_008171300.1 COG0824 Predicted thioesterase YP_008171301.1 COG0811 Biopolymer transport proteins YP_008171302.1 COG0848 Biopolymer transport protein YP_008171303.1 COG3064 Membrane protein involved in colicin uptake YP_008171304.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008171305.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008171306.1 COG1729 Uncharacterized protein conserved in bacteria YP_008171307.1 COG0379 Quinolinate synthase YP_008171309.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_008171310.1 COG1893 Ketopantoate reductase YP_008171312.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008171313.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171314.1 COG3038 Cytochrome B561 YP_008171315.1 COG2199 FOG: GGDEF domain YP_008171318.1 COG1451 Predicted metal-dependent hydrolase YP_008171319.1 COG0517 FOG: CBS domain YP_008171320.1 COG0841 Cation/multidrug efflux pump YP_008171321.1 COG0845 Membrane-fusion protein YP_008171322.1 COG1309 Transcriptional regulator YP_008171323.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171324.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008171325.1 COG0841 Cation/multidrug efflux pump YP_008171326.1 COG0845 Membrane-fusion protein YP_008171327.1 COG2199 FOG: GGDEF domain YP_008171328.1 COG3009 Uncharacterized protein conserved in bacteria YP_008171329.1 COG3008 Paraquat-inducible protein B YP_008171330.1 COG2995 Uncharacterized paraquat-inducible protein A YP_008171332.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171333.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_008171335.1 COG0530 Ca2+/Na+ antiporter YP_008171336.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008171337.1 COG0456 Acetyltransferases YP_008171340.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_008171341.1 COG0502 Biotin synthase and related enzymes YP_008171342.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_008171343.1 COG0500 SAM-dependent methyltransferases YP_008171344.1 COG0132 Dethiobiotin synthetase YP_008171345.1 COG3340 Peptidase E YP_008171346.1 COG0394 Protein-tyrosine-phosphatase YP_008171347.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008171348.1 COG4138 ABC-type cobalamin transport system, ATPase component YP_008171349.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008171351.1 COG3530 Uncharacterized protein conserved in bacteria YP_008171352.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_008171353.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_008171354.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008171355.1 COG0784 FOG: CheY-like receiver YP_008171356.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008171357.1 COG3608 Predicted deacylase YP_008171359.1 COG3313 Predicted Fe-S protein YP_008171360.1 COG0042 tRNA-dihydrouridine synthase YP_008171361.1 COG1943 Transposase and inactivated derivatives YP_008171363.1 COG2755 Lysophospholipase L1 and related esterases YP_008171364.1 COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component YP_008171365.1 COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component YP_008171366.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_008171367.1 COG1539 Dihydroneopterin aldolase YP_008171368.1 COG0628 Predicted permease YP_008171369.1 COG0642 Signal transduction histidine kinase YP_008171370.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008171371.1 COG3212 Predicted membrane protein YP_008171372.1 COG3871 Uncharacterized stress protein (general stress protein 26) YP_008171373.1 COG2350 Uncharacterized protein conserved in bacteria YP_008171374.1 COG0159 Tryptophan synthase alpha chain YP_008171375.1 COG0133 Tryptophan synthase beta chain YP_008171376.1 COG0134 Indole-3-glycerol phosphate synthase YP_008171377.1 COG0547 Anthranilate phosphoribosyltransferase YP_008171378.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_008171379.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_008171380.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_008171381.1 COG0009 Putative translation factor (SUA5) YP_008171382.1 COG1354 Uncharacterized conserved protein YP_008171383.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_008171384.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008171385.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_008171386.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008171387.1 COG3595 Uncharacterized conserved protein YP_008171388.1 COG2733 Predicted membrane protein YP_008171389.1 COG0500 SAM-dependent methyltransferases YP_008171390.1 COG2913 Small protein A (tmRNA-binding) YP_008171391.1 COG0497 ATPase involved in DNA repair YP_008171392.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_008171393.1 COG0061 Predicted sugar kinase YP_008171394.1 COG1454 Alcohol dehydrogenase, class IV YP_008171395.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171396.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008171397.1 COG2021 Homoserine acetyltransferase YP_008171398.1 COG2610 H+/gluconate symporter and related permeases YP_008171399.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171400.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008171401.1 COG0591 Na+/proline symporter YP_008171402.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_008171403.1 COG0443 Molecular chaperone YP_008171404.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_008171405.1 COG3909 Cytochrome c556 YP_008171406.1 COG2202 FOG: PAS/PAC domain YP_008171407.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008171408.1 COG3658 Cytochrome b YP_008171409.1 COG0289 Dihydrodipicolinate reductase YP_008171410.1 COG0505 Carbamoylphosphate synthase small subunit YP_008171411.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008171412.1 COG0782 Transcription elongation factor YP_008171413.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008171415.1 COG0071 Molecular chaperone (small heat shock protein) YP_008171416.1 COG0282 Acetate kinase YP_008171417.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_008171418.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008171419.1 COG3668 Plasmid stabilization system protein YP_008171420.1 COG0815 Apolipoprotein N-acyltransferase YP_008171421.1 COG4535 Putative Mg2+ and Co2+ transporter CorC YP_008171422.1 COG0319 Predicted metal-dependent hydrolase YP_008171423.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_008171424.1 COG0621 2-methylthioadenine synthetase YP_008171425.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008171427.1 COG1309 Transcriptional regulator YP_008171428.1 COG2128 Uncharacterized conserved protein YP_008171432.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171433.1 COG1607 Acyl-CoA hydrolase YP_008171434.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008171435.1 COG3806 Anti-sigma factor YP_008171436.1 COG1115 Na+/alanine symporter YP_008171437.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008171438.1 COG0012 Predicted GTPase, probable translation factor YP_008171439.1 COG0193 Peptidyl-tRNA hydrolase YP_008171440.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_008171441.1 COG1064 Zn-dependent alcohol dehydrogenases YP_008171444.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_008171445.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_008171446.1 COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis YP_008171447.1 COG0373 Glutamyl-tRNA reductase YP_008171448.1 COG0216 Protein chain release factor A YP_008171449.1 COG2890 Methylase of polypeptide chain release factors YP_008171450.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008171452.1 COG3094 Uncharacterized protein conserved in bacteria YP_008171453.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_008171455.1 COG0583 Transcriptional regulator YP_008171456.1 COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold YP_008171457.1 COG2363 Uncharacterized small membrane protein YP_008171458.1 COG2933 Predicted SAM-dependent methyltransferase YP_008171459.1 COG0480 Translation elongation factors (GTPases) YP_008171460.1 COG1513 Cyanate lyase YP_008171461.1 COG0631 Serine/threonine protein phosphatase YP_008171462.1 COG2116 Formate/nitrite family of transporters YP_008171463.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_008171464.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008171465.1 COG0714 MoxR-like ATPases YP_008171466.1 COG3057 Negative regulator of replication initiationR YP_008171467.1 COG0033 Phosphoglucomutase YP_008171468.1 COG0058 Glucan phosphorylase YP_008171469.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008171470.1 COG2988 Succinylglutamate desuccinylase YP_008171471.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_008171472.1 COG0393 Uncharacterized conserved protein YP_008171473.1 COG1301 Na+/H+-dicarboxylate symporters YP_008171475.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_008171476.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008171477.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008171479.1 COG2190 Phosphotransferase system IIA components YP_008171480.1 COG3603 Uncharacterized conserved protein YP_008171481.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_008171482.1 COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins YP_008171483.1 COG3508 Homogentisate 1,2-dioxygenase YP_008171485.1 COG1846 Transcriptional regulators YP_008171487.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008171490.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008171491.1 COG2801 Transposase and inactivated derivatives YP_008171492.1 COG2963 Transposase and inactivated derivatives YP_008171493.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008171495.1 COG0206 Cell division GTPase YP_008171497.1 COG2199 FOG: GGDEF domain YP_008171498.1 COG0841 Cation/multidrug efflux pump YP_008171499.1 COG0845 Membrane-fusion protein YP_008171500.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008171501.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008171502.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008171503.1 COG1733 Predicted transcriptional regulators YP_008171504.1 COG2202 FOG: PAS/PAC domain YP_008171505.1 COG3748 Predicted membrane protein YP_008171506.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_008171507.1 COG2351 Transthyretin-like protein YP_008171508.1 COG3195 Uncharacterized protein conserved in bacteria YP_008171509.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_008171510.1 COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B YP_008171511.1 COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A YP_008171513.1 COG1309 Transcriptional regulator YP_008171514.1 COG0726 Predicted xylanase/chitin deacetylase YP_008171516.1 COG2252 Permeases YP_008171517.1 COG1816 Adenosine deaminase YP_008171518.1 COG0784 FOG: CheY-like receiver YP_008171519.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008171520.1 COG2200 FOG: EAL domain YP_008171521.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008171522.1 COG0642 Signal transduction histidine kinase YP_008171523.1 COG5042 Purine nucleoside permease YP_008171524.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171525.1 COG2233 Xanthine/uracil permeases YP_008171526.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_008171527.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008171528.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_008171529.1 COG0730 Predicted permeases YP_008171530.1 COG0405 Gamma-glutamyltransferase YP_008171531.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008171533.1 COG3803 Uncharacterized protein conserved in bacteria YP_008171534.1 COG1737 Transcriptional regulators YP_008171535.1 COG1266 Predicted metal-dependent membrane protease YP_008171536.1 COG0668 Small-conductance mechanosensitive channel YP_008171538.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171539.1 COG3001 Fructosamine-3-kinase YP_008171540.1 COG0441 Threonyl-tRNA synthetase YP_008171541.1 COG0290 Translation initiation factor 3 (IF-3) YP_008171542.1 COG0291 Ribosomal protein L35 YP_008171543.1 COG0292 Ribosomal protein L20 YP_008171544.1 COG0695 Glutaredoxin and related proteins YP_008171545.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_008171547.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008171548.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_008171549.1 COG4464 Capsular polysaccharide biosynthesis protein YP_008171550.1 COG0457 FOG: TPR repeat YP_008171552.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008171553.1 COG2963 Transposase and inactivated derivatives YP_008171554.1 COG2801 Transposase and inactivated derivatives YP_008171557.1 COG2199 FOG: GGDEF domain YP_008171558.1 COG3672 Predicted periplasmic protein YP_008171559.1 COG0438 Glycosyltransferase YP_008171560.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008171561.1 COG0438 Glycosyltransferase YP_008171562.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008171563.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_008171564.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_008171565.1 COG0438 Glycosyltransferase YP_008171566.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_008171567.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008171569.1 COG0438 Glycosyltransferase YP_008171570.1 COG0438 Glycosyltransferase YP_008171572.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_008171573.1 COG0073 EMAP domain YP_008171574.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008171576.1 COG2606 Uncharacterized conserved protein YP_008171577.1 COG2366 Protein related to penicillin acylase YP_008171578.1 COG1472 Beta-glucosidase-related glycosidases YP_008171579.1 COG2096 Uncharacterized conserved protein YP_008171581.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_008171583.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_008171584.1 COG2236 Predicted phosphoribosyltransferases YP_008171585.1 COG0642 Signal transduction histidine kinase YP_008171586.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008171587.1 COG3235 Predicted membrane protein YP_008171588.1 COG0708 Exonuclease III YP_008171591.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_008171592.1 COG0438 Glycosyltransferase YP_008171593.1 COG1639 Predicted signal transduction protein YP_008171594.1 COG1946 Acyl-CoA thioesterase YP_008171595.1 COG0477 Permeases of the major facilitator superfamily YP_008171596.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008171597.1 COG0448 ADP-glucose pyrophosphorylase YP_008171601.1 COG1943 Transposase and inactivated derivatives YP_008171602.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008171603.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_008171604.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008171605.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_008171606.1 COG1960 Acyl-CoA dehydrogenases YP_008171607.1 COG0789 Predicted transcriptional regulators YP_008171608.1 COG0183 Acetyl-CoA acetyltransferase YP_008171609.1 COG0657 Esterase/lipase YP_008171610.1 COG3844 Kynureninase YP_008171611.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008171612.1 COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain YP_008171613.1 COG2925 Exonuclease I YP_008171614.1 COG0642 Signal transduction histidine kinase YP_008171615.1 COG1446 Asparaginase YP_008171616.1 COG0517 FOG: CBS domain YP_008171617.1 COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_008171618.1 COG1409 Predicted phosphohydrolases YP_008171620.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171621.1 COG2199 FOG: GGDEF domain YP_008171622.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008171623.1 COG1757 Na+/H+ antiporter YP_008171624.1 COG1643 HrpA-like helicases YP_008171626.1 COG3205 Predicted membrane protein YP_008171627.1 COG1092 Predicted SAM-dependent methyltransferases YP_008171628.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008171629.1 COG0328 Ribonuclease HI YP_008171630.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008171632.1 COG4943 Predicted signal transduction protein containing sensor and EAL domains YP_008171633.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008171634.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_008171635.1 COG1301 Na+/H+-dicarboxylate symporters YP_008171637.1 COG3724 Succinylarginine dihydrolase YP_008171639.1 COG0550 Topoisomerase IA YP_008171640.1 COG3122 Uncharacterized protein conserved in bacteria YP_008171641.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_008171642.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_008171643.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008171644.1 COG2153 Predicted acyltransferase YP_008171645.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008171647.1 COG1530 Ribonucleases G and E YP_008171648.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008171649.1 COG0546 Predicted phosphatases YP_008171650.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_008171651.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_008171652.1 COG0333 Ribosomal protein L32 YP_008171653.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_008171654.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008171655.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_008171656.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171657.1 COG0236 Acyl carrier protein YP_008171658.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008171659.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008171660.1 COG1559 Predicted periplasmic solute-binding protein YP_008171661.1 COG0125 Thymidylate kinase YP_008171662.1 COG0470 ATPase involved in DNA replication YP_008171663.1 COG0084 Mg-dependent DNase YP_008171664.1 COG5135 Uncharacterized conserved protein YP_008171665.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008171666.1 COG2199 FOG: GGDEF domain YP_008171668.1 COG3296 Uncharacterized protein conserved in bacteria YP_008171670.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171671.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008171672.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008171673.1 COG0183 Acetyl-CoA acetyltransferase YP_008171674.1 COG1960 Acyl-CoA dehydrogenases YP_008171677.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_008171678.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008171679.1 COG1457 Purine-cytosine permease and related proteins YP_008171680.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_008171682.1 COG0583 Transcriptional regulator YP_008171683.1 COG2030 Acyl dehydratase YP_008171685.1 COG0668 Small-conductance mechanosensitive channel YP_008171686.1 COG3300 MHYT domain (predicted integral membrane sensor domain) YP_008171687.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008171688.1 COG0779 Uncharacterized protein conserved in bacteria YP_008171689.1 COG0195 Transcription elongation factor YP_008171690.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_008171691.1 COG0858 Ribosome-binding factor A YP_008171692.1 COG0130 Pseudouridine synthase YP_008171694.1 COG0184 Ribosomal protein S15P/S13E YP_008171695.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008171696.1 COG1196 Chromosome segregation ATPases YP_008171697.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008171699.1 COG3751 Predicted proline hydroxylase YP_008171701.1 COG0784 FOG: CheY-like receiver YP_008171702.1 COG2374 Predicted extracellular nuclease YP_008171703.1 COG4320 Uncharacterized protein conserved in bacteria YP_008171705.1 COG0450 Peroxiredoxin YP_008171706.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_008171708.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008171710.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_008171711.1 COG3386 Gluconolactonase YP_008171712.1 COG0793 Periplasmic protease YP_008171713.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008171714.1 COG1032 Fe-S oxidoreductase YP_008171715.1 COG2947 Uncharacterized conserved protein YP_008171717.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171718.1 COG0398 Uncharacterized conserved protein YP_008171720.1 COG4134 ABC-type uncharacterized transport system, periplasmic component YP_008171721.1 COG4135 ABC-type uncharacterized transport system, permease component YP_008171722.1 COG4136 ABC-type uncharacterized transport system, ATPase component YP_008171723.1 COG0558 Phosphatidylglycerophosphate synthase YP_008171724.1 COG3000 Sterol desaturase YP_008171726.1 COG3932 Uncharacterized ABC-type transport system, permease components YP_008171727.1 COG2199 FOG: GGDEF domain YP_008171731.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008171733.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008171734.1 COG0691 tmRNA-binding protein YP_008171735.1 COG2867 Oligoketide cyclase/lipid transport protein YP_008171736.1 COG2914 Uncharacterized protein conserved in bacteria YP_008171737.1 COG1846 Transcriptional regulators YP_008171738.1 COG1292 Choline-glycine betaine transporter YP_008171739.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171740.1 COG0457 FOG: TPR repeat YP_008171742.1 COG1806 Uncharacterized protein conserved in bacteria YP_008171743.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_008171745.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008171746.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008171750.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008171751.1 COG2850 Uncharacterized conserved protein YP_008171752.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_008171753.1 COG0015 Adenylosuccinate lyase YP_008171754.1 COG2915 Uncharacterized protein involved in purine metabolism YP_008171755.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_008171756.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008171757.1 COG2838 Monomeric isocitrate dehydrogenase YP_008171758.1 COG1278 Cold shock proteins YP_008171759.1 COG2127 Uncharacterized conserved protein YP_008171760.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_008171761.1 COG0361 Translation initiation factor 1 (IF-1) YP_008171762.1 COG2935 Putative arginyl-tRNA:protein arginylyltransferase YP_008171763.1 COG2360 Leu/Phe-tRNA-protein transferase YP_008171764.1 COG0492 Thioredoxin reductase YP_008171765.1 COG3092 Uncharacterized protein conserved in bacteria YP_008171766.1 COG3091 Uncharacterized protein conserved in bacteria YP_008171767.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008171769.1 COG2259 Predicted membrane protein YP_008171770.1 COG0778 Nitroreductase YP_008171772.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_008171773.1 COG0320 Lipoate synthase YP_008171774.1 COG0321 Lipoate-protein ligase B YP_008171775.1 COG2921 Uncharacterized conserved protein YP_008171776.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_008171777.1 COG0797 Lipoproteins YP_008171778.1 COG0772 Bacterial cell division membrane protein YP_008171779.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_008171780.1 COG1576 Uncharacterized conserved protein YP_008171781.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_008171782.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_008171783.1 COG1466 DNA polymerase III, delta subunit YP_008171784.1 COG2980 Rare lipoprotein B YP_008171785.1 COG0495 Leucyl-tRNA synthetase YP_008171788.1 COG1067 Predicted ATP-dependent protease YP_008171789.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008171790.1 COG2199 FOG: GGDEF domain YP_008171791.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171792.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_008171793.1 COG0293 23S rRNA methylase YP_008171794.1 COG0465 ATP-dependent Zn proteases YP_008171795.1 COG0294 Dihydropteroate synthase and related enzymes YP_008171796.1 COG1109 Phosphomannomutase YP_008171797.1 COG0149 Triosephosphate isomerase YP_008171798.1 COG1314 Preprotein translocase subunit SecG YP_008171799.1 COG2199 FOG: GGDEF domain YP_008171800.1 COG0401 Uncharacterized homolog of Blt101 YP_008171802.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_008171803.1 COG0671 Membrane-associated phospholipid phosphatase YP_008171805.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171806.1 COG0561 Predicted hydrolases of the HAD superfamily YP_008171808.1 COG3569 Topoisomerase IB YP_008171809.1 COG0591 Na+/proline symporter YP_008171810.1 COG0263 Glutamate 5-kinase YP_008171811.1 COG0014 Gamma-glutamyl phosphate reductase YP_008171812.1 COG0668 Small-conductance mechanosensitive channel YP_008171813.1 COG1403 Restriction endonuclease YP_008171814.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_008171815.1 COG3492 Uncharacterized protein conserved in bacteria YP_008171819.1 COG3209 Rhs family protein YP_008171821.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008171823.1 COG0500 SAM-dependent methyltransferases YP_008171825.1 COG2205 Osmosensitive K+ channel histidine kinase YP_008171832.1 COG3328 Transposase and inactivated derivatives YP_008171834.1 COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid YP_008171835.1 COG1943 Transposase and inactivated derivatives YP_008171836.1 COG3809 Uncharacterized protein conserved in bacteria YP_008171837.1 COG5056 Acyl-CoA cholesterol acyltransferase YP_008171838.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008171842.1 COG0563 Adenylate kinase and related kinases YP_008171845.1 COG5331 Uncharacterized protein conserved in bacteria YP_008171851.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008171852.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008171854.1 COG0295 Cytidine deaminase YP_008171855.1 COG4785 Lipoprotein NlpI, contains TPR repeats YP_008171856.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008171857.1 COG2981 Uncharacterized protein involved in cysteine biosynthesis YP_008171858.1 COG1196 Chromosome segregation ATPases YP_008171859.1 COG3115 Cell division protein YP_008171860.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_008171861.1 COG3216 Uncharacterized protein conserved in bacteria YP_008171863.1 COG0658 Predicted membrane metal-binding protein YP_008171864.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008171865.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_008171866.1 COG2835 Uncharacterized conserved protein YP_008171867.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_008171868.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171869.1 COG0621 2-methylthioadenine synthetase YP_008171872.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_008171873.1 COG0435 Predicted glutathione S-transferase YP_008171874.1 COG1741 Pirin-related protein YP_008171875.1 COG1109 Phosphomannomutase YP_008171877.1 COG0372 Citrate synthase YP_008171878.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_008171879.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_008171880.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_008171881.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_008171882.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_008171883.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008171884.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_008171885.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_008171886.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171888.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_008171889.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171890.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008171891.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_008171892.1 COG0219 Predicted rRNA methylase (SpoU class) YP_008171893.1 COG3176 Putative hemolysin YP_008171894.1 COG0366 Glycosidases YP_008171895.1 COG0366 Glycosidases YP_008171896.1 COG0477 Permeases of the major facilitator superfamily YP_008171897.1 COG0366 Glycosidases YP_008171898.1 COG1609 Transcriptional regulators YP_008171899.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008171900.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008171901.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008171902.1 COG2366 Protein related to penicillin acylase YP_008171903.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008171904.1 COG1309 Transcriptional regulator YP_008171906.1 COG0327 Uncharacterized conserved protein YP_008171907.1 COG0500 SAM-dependent methyltransferases YP_008171908.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_008171909.1 COG0386 Glutathione peroxidase YP_008171910.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_008171911.1 COG0784 FOG: CheY-like receiver YP_008171912.1 COG1960 Acyl-CoA dehydrogenases YP_008171913.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008171915.1 COG0500 SAM-dependent methyltransferases YP_008171916.1 COG0241 Histidinol phosphatase and related phosphatases YP_008171917.1 COG3083 Predicted hydrolase of alkaline phosphatase superfamily YP_008171918.1 COG3082 Uncharacterized protein conserved in bacteria YP_008171919.1 COG3081 Nucleoid-associated protein YP_008171920.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_008171921.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008171922.1 COG3975 Predicted protease with the C-terminal PDZ domain YP_008171924.1 COG4539 Predicted membrane protein YP_008171925.1 COG2972 Predicted signal transduction protein with a C-terminal ATPase domain YP_008171926.1 COG3279 Response regulator of the LytR/AlgR family YP_008171927.1 COG0205 6-phosphofructokinase YP_008171929.1 COG4973 Site-specific recombinase XerC YP_008171930.1 COG4680 Uncharacterized protein conserved in bacteria YP_008171931.1 COG5499 Predicted transcription regulator containing HTH domain YP_008171932.1 COG3866 Pectate lyase YP_008171933.1 COG3866 Pectate lyase YP_008171934.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008171935.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008171936.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008171937.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_008171938.1 COG1636 Uncharacterized protein conserved in bacteria YP_008171940.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008171941.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008171948.1 COG0500 SAM-dependent methyltransferases YP_008171949.1 COG0675 Transposase and inactivated derivatives YP_008171951.1 COG1451 Predicted metal-dependent hydrolase YP_008171953.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008171955.1 COG0638 20S proteasome, alpha and beta subunits YP_008171957.1 COG2051 Ribosomal protein S27E YP_008171958.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008171960.1 COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif YP_008171961.1 COG0784 FOG: CheY-like receiver YP_008171963.1 COG1054 Predicted sulfurtransferase YP_008171964.1 COG5126 Ca2+-binding protein (EF-Hand superfamily) YP_008171965.1 COG0513 Superfamily II DNA and RNA helicases YP_008171966.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_008171967.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_008171968.1 COG0583 Transcriptional regulator YP_008171970.1 COG0642 Signal transduction histidine kinase YP_008171971.1 COG0583 Transcriptional regulator YP_008171972.1 COG1760 L-serine deaminase YP_008171973.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008171974.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_008171975.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain YP_008171977.1 COG1322 Uncharacterized protein conserved in bacteria YP_008171978.1 COG1404 Subtilisin-like serine proteases YP_008171979.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_008171980.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_008171981.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008171982.1 COG2961 Protein involved in catabolism of external DNA YP_008171983.1 COG0515 Serine/threonine protein kinase YP_008171984.1 COG1946 Acyl-CoA thioesterase YP_008171985.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_008171986.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_008171987.1 COG2968 Uncharacterized conserved protein YP_008171988.1 COG1956 GAF domain-containing protein YP_008171990.1 COG3109 Activator of osmoprotectant transporter ProP YP_008171991.1 COG0793 Periplasmic protease YP_008171992.1 COG0733 Na+-dependent transporters of the SNF family YP_008171993.1 COG1757 Na+/H+ antiporter YP_008171994.1 COG0308 Aminopeptidase N YP_008171998.1 COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor YP_008171999.1 COG1033 Predicted exporters of the RND superfamily YP_008172000.1 COG2902 NAD-specific glutamate dehydrogenase YP_008172001.1 COG0167 Dihydroorotate dehydrogenase YP_008172002.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_008172003.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008172004.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008172006.1 COG3130 Ribosome modulation factor YP_008172007.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008172009.1 COG0415 Deoxyribodipyrimidine photolyase YP_008172010.1 COG2202 FOG: PAS/PAC domain YP_008172011.1 COG2202 FOG: PAS/PAC domain YP_008172012.1 COG2202 FOG: PAS/PAC domain YP_008172013.1 COG2202 FOG: PAS/PAC domain YP_008172014.1 COG2203 FOG: GAF domain YP_008172015.1 COG2238 Ribosomal protein S19E (S16A) YP_008172016.1 COG1196 Chromosome segregation ATPases YP_008172017.1 COG0582 Integrase YP_008172018.1 COG1742 Uncharacterized conserved protein YP_008172019.1 COG1230 Co/Zn/Cd efflux system component YP_008172020.1 COG3696 Putative silver efflux pump YP_008172021.1 COG0845 Membrane-fusion protein YP_008172024.1 COG2217 Cation transport ATPase YP_008172025.1 COG0640 Predicted transcriptional regulators YP_008172026.1 COG1230 Co/Zn/Cd efflux system component YP_008172027.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008172028.1 COG0640 Predicted transcriptional regulators YP_008172029.1 COG0789 Predicted transcriptional regulators YP_008172030.1 COG2217 Cation transport ATPase YP_008172032.1 COG0789 Predicted transcriptional regulators YP_008172033.1 COG0789 Predicted transcriptional regulators YP_008172034.1 COG2217 Cation transport ATPase YP_008172046.1 COG1484 DNA replication protein YP_008172047.1 COG1846 Transcriptional regulators YP_008172049.1 COG1192 ATPases involved in chromosome partitioning YP_008172050.1 COG1475 Predicted transcriptional regulators YP_008172057.1 COG0415 Deoxyribodipyrimidine photolyase YP_008172058.1 COG0415 Deoxyribodipyrimidine photolyase YP_008172059.1 COG0415 Deoxyribodipyrimidine photolyase YP_008172060.1 COG0415 Deoxyribodipyrimidine photolyase YP_008172061.1 COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase YP_008172062.1 COG4338 Uncharacterized protein conserved in bacteria YP_008172063.1 COG4325 Predicted membrane protein YP_008172065.1 COG4974 Site-specific recombinase XerD YP_008172067.1 COG0818 Diacylglycerol kinase YP_008172068.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008172070.1 COG0069 Glutamate synthase domain 2 YP_008172071.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component YP_008172072.1 COG2193 Bacterioferritin (cytochrome b1) YP_008172073.1 COG2193 Bacterioferritin (cytochrome b1) YP_008172075.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_008172076.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_008172077.1 COG4736 Cbb3-type cytochrome oxidase, subunit 3 YP_008172078.1 COG2010 Cytochrome c, mono- and diheme variants YP_008172079.1 COG3198 Uncharacterized protein conserved in bacteria YP_008172080.1 COG2217 Cation transport ATPase YP_008172081.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_008172082.1 COG2836 Uncharacterized conserved protein YP_008172083.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008172084.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008172085.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_008172086.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008172088.1 COG2992 Uncharacterized FlgJ-related protein YP_008172090.1 COG1280 Putative threonine efflux protein YP_008172091.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_008172092.1 COG2897 Rhodanese-related sulfurtransferase YP_008172093.1 COG2077 Peroxiredoxin YP_008172094.1 COG3148 Uncharacterized conserved protein YP_008172096.1 COG4220 Phage DNA packaging protein, Nu1 subunit of terminase YP_008172099.1 COG0192 S-adenosylmethionine synthetase YP_008172106.1 COG0058 Glucan phosphorylase YP_008172108.1 COG3311 Predicted transcriptional regulator YP_008172110.1 COG0582 Integrase YP_008172111.1 COG0558 Phosphatidylglycerophosphate synthase YP_008172112.1 COG0322 Nuclease subunit of the excinuclease complex YP_008172113.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008172114.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_008172115.1 COG3384 Uncharacterized conserved protein YP_008172116.1 COG2259 Predicted membrane protein YP_008172117.1 COG0583 Transcriptional regulator YP_008172120.1 COG0670 Integral membrane protein, interacts with FtsH YP_008172121.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction YP_008172122.1 COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur YP_008172124.1 COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit YP_008172127.1 COG2319 FOG: WD40 repeat YP_008172128.1 COG0172 Seryl-tRNA synthetase YP_008172129.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_008172130.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_008172131.1 COG2834 Outer membrane lipoprotein-sorting protein YP_008172132.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_008172133.1 COG1522 Transcriptional regulators YP_008172134.1 COG0686 Alanine dehydrogenase YP_008172135.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_008172136.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_008172137.1 COG3771 Predicted membrane protein YP_008172138.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008172139.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008172140.1 COG0539 Ribosomal protein S1 YP_008172141.1 COG0283 Cytidylate kinase YP_008172142.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_008172143.1 COG1932 Phosphoserine aminotransferase YP_008172144.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008172145.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008172146.1 COG0209 Ribonucleotide reductase, alpha subunit YP_008172147.1 COG0208 Ribonucleotide reductase, beta subunit YP_008172148.1 COG0633 Ferredoxin YP_008172149.1 COG5460 Uncharacterized conserved protein YP_008172151.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008172152.1 COG2203 FOG: GAF domain YP_008172153.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008172154.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_008172155.1 COG3317 Uncharacterized lipoprotein YP_008172156.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008172157.1 COG2716 Glycine cleavage system regulatory protein YP_008172158.1 COG1225 Peroxiredoxin YP_008172159.1 COG0628 Predicted permease YP_008172160.1 COG4783 Putative Zn-dependent protease, contains TPR repeats YP_008172161.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008172162.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008172163.1 COG0655 Multimeric flavodoxin WrbA YP_008172164.1 COG3308 Predicted membrane protein YP_008172165.1 COG0593 ATPase involved in DNA replication initiation YP_008172166.1 COG3249 Uncharacterized protein conserved in bacteria YP_008172167.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_008172168.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_008172170.1 COG1960 Acyl-CoA dehydrogenases YP_008172171.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_008172172.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008172173.1 COG0500 SAM-dependent methyltransferases YP_008172174.1 COG0500 SAM-dependent methyltransferases YP_008172175.1 COG4240 Predicted kinase YP_008172176.1 COG3769 Predicted hydrolase (HAD superfamily) YP_008172177.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008172178.1 COG0366 Glycosidases YP_008172179.1 COG0546 Predicted phosphatases YP_008172180.1 COG0303 Molybdopterin biosynthesis enzyme YP_008172181.1 COG0534 Na+-driven multidrug efflux pump YP_008172182.1 COG2068 Uncharacterized MobA-related protein YP_008172183.1 COG3825 Uncharacterized protein conserved in bacteria YP_008172184.1 COG0714 MoxR-like ATPases YP_008172185.1 COG0031 Cysteine synthase YP_008172188.1 COG3668 Plasmid stabilization system protein YP_008172190.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008172191.1 COG2944 Predicted transcriptional regulator YP_008172192.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008172193.1 COG3668 Plasmid stabilization system protein YP_008172195.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_008172196.1 COG0405 Gamma-glutamyltransferase YP_008172197.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008172198.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008172199.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008172200.1 COG0386 Glutathione peroxidase YP_008172201.1 COG1182 Acyl carrier protein phosphodiesterase YP_008172203.1 COG2873 O-acetylhomoserine sulfhydrylase YP_008172204.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008172205.1 COG3332 Uncharacterized conserved protein YP_008172206.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_008172208.1 COG1671 Uncharacterized protein conserved in bacteria YP_008172209.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172210.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172211.1 COG1960 Acyl-CoA dehydrogenases YP_008172212.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_008172213.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008172215.1 COG1505 Serine proteases of the peptidase family S9A YP_008172216.1 COG0841 Cation/multidrug efflux pump YP_008172217.1 COG0845 Membrane-fusion protein YP_008172219.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_008172220.1 COG2086 Electron transfer flavoprotein, beta subunit YP_008172221.1 COG0644 Dehydrogenases (flavoproteins) YP_008172222.1 COG2916 DNA-binding protein H-NS YP_008172223.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008172225.1 COG0716 Flavodoxins YP_008172226.1 COG0840 Methyl-accepting chemotaxis protein YP_008172227.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_008172228.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008172229.1 COG1984 Allophanate hydrolase subunit 2 YP_008172230.1 COG2049 Allophanate hydrolase subunit 1 YP_008172231.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_008172232.1 COG2996 Uncharacterized protein conserved in bacteria YP_008172233.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_008172234.1 COG0845 Membrane-fusion protein YP_008172235.1 COG0841 Cation/multidrug efflux pump YP_008172236.1 COG0841 Cation/multidrug efflux pump YP_008172239.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_008172240.1 COG1896 Predicted hydrolases of HD superfamily YP_008172241.1 COG1896 Predicted hydrolases of HD superfamily YP_008172243.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008172244.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008172246.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008172247.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_008172248.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172249.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008172250.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008172252.1 COG1896 Predicted hydrolases of HD superfamily YP_008172253.1 COG0232 dGTP triphosphohydrolase YP_008172254.1 COG2041 Sulfite oxidase and related enzymes YP_008172255.1 COG2717 Predicted membrane protein YP_008172256.1 COG1238 Predicted membrane protein YP_008172258.1 COG3012 Uncharacterized protein conserved in bacteria YP_008172260.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008172261.1 COG3173 Predicted aminoglycoside phosphotransferase YP_008172262.1 COG1960 Acyl-CoA dehydrogenases YP_008172263.1 COG0406 Fructose-2,6-bisphosphatase YP_008172264.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008172265.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_008172266.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_008172267.1 COG2755 Lysophospholipase L1 and related esterases YP_008172268.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008172269.1 COG4148 ABC-type molybdate transport system, ATPase component YP_008172270.1 COG4149 ABC-type molybdate transport system, permease component YP_008172271.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_008172272.1 COG0314 Molybdopterin converting factor, large subunit YP_008172273.1 COG1977 Molybdopterin converting factor, small subunit YP_008172274.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_008172275.1 COG0521 Molybdopterin biosynthesis enzymes YP_008172276.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008172277.1 COG3608 Predicted deacylase YP_008172278.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008172279.1 COG4115 Uncharacterized protein conserved in bacteria YP_008172282.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_008172283.1 COG3268 Uncharacterized conserved protein YP_008172284.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008172287.1 COG0620 Methionine synthase II (cobalamin-independent) YP_008172288.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008172290.1 COG5006 Predicted permease, DMT superfamily YP_008172293.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_008172294.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_008172295.1 COG1330 Exonuclease V gamma subunit YP_008172298.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008172299.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008172300.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_008172303.1 COG0583 Transcriptional regulator YP_008172305.1 COG3085 Uncharacterized protein conserved in bacteria YP_008172306.1 COG3861 Uncharacterized protein conserved in bacteria YP_008172307.1 COG0640 Predicted transcriptional regulators YP_008172308.1 COG0607 Rhodanese-related sulfurtransferase YP_008172309.1 COG0583 Transcriptional regulator YP_008172310.1 COG3932 Uncharacterized ABC-type transport system, permease components YP_008172311.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008172312.1 COG0642 Signal transduction histidine kinase YP_008172313.1 COG0642 Signal transduction histidine kinase YP_008172314.1 COG0784 FOG: CheY-like receiver YP_008172315.1 COG0642 Signal transduction histidine kinase YP_008172320.1 COG1896 Predicted hydrolases of HD superfamily YP_008172325.1 COG3139 Uncharacterized protein conserved in bacteria YP_008172328.1 COG1115 Na+/alanine symporter YP_008172329.1 COG2866 Predicted carboxypeptidase YP_008172330.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008172332.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_008172333.1 COG0362 6-phosphogluconate dehydrogenase YP_008172334.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008172335.1 COG0296 1,4-alpha-glucan branching enzyme YP_008172336.1 COG1640 4-alpha-glucanotransferase YP_008172337.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008172338.1 COG0676 Uncharacterized enzymes related to aldose 1-epimerase YP_008172339.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008172340.1 COG0837 Glucokinase YP_008172341.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008172342.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_008172343.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_008172344.1 COG1737 Transcriptional regulators YP_008172345.1 COG0469 Pyruvate kinase YP_008172346.1 COG0775 Nucleoside phosphorylase YP_008172348.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_008172349.1 COG3021 Uncharacterized protein conserved in bacteria YP_008172352.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008172353.1 COG3403 Uncharacterized conserved protein YP_008172354.1 COG3665 Uncharacterized conserved protein YP_008172356.1 COG3211 Predicted phosphatase YP_008172358.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_008172359.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172360.1 COG3717 5-keto 4-deoxyuronate isomerase YP_008172361.1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component YP_008172362.1 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component YP_008172363.1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component YP_008172364.1 COG1609 Transcriptional regulators YP_008172365.1 COG2721 Altronate dehydratase YP_008172366.1 COG1904 Glucuronate isomerase YP_008172367.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_008172368.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008172369.1 COG0524 Sugar kinases, ribokinase family YP_008172370.1 COG2755 Lysophospholipase L1 and related esterases YP_008172371.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008172373.1 COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins YP_008172374.1 COG5434 Endopolygalacturonase YP_008172375.1 COG4677 Pectin methylesterase YP_008172376.1 COG0642 Signal transduction histidine kinase YP_008172377.1 COG2378 Predicted transcriptional regulator YP_008172379.1 COG2356 Endonuclease I YP_008172380.1 COG0840 Methyl-accepting chemotaxis protein YP_008172382.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008172383.1 COG0583 Transcriptional regulator YP_008172384.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_008172385.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008172386.1 COG0778 Nitroreductase YP_008172387.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008172388.1 COG2203 FOG: GAF domain YP_008172390.1 COG0471 Di- and tricarboxylate transporters YP_008172391.1 COG0717 Deoxycytidine deaminase YP_008172392.1 COG0489 ATPases involved in chromosome partitioning YP_008172393.1 COG0143 Methionyl-tRNA synthetase YP_008172394.1 COG0668 Small-conductance mechanosensitive channel YP_008172395.1 COG0500 SAM-dependent methyltransferases YP_008172396.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008172397.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008172402.1 COG0215 Cysteinyl-tRNA synthetase YP_008172403.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008172404.1 COG2908 Uncharacterized protein conserved in bacteria YP_008172405.1 COG1785 Alkaline phosphatase YP_008172406.1 COG1785 Alkaline phosphatase YP_008172409.1 COG2268 Uncharacterized protein conserved in bacteria YP_008172410.1 COG0583 Transcriptional regulator YP_008172411.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172413.1 COG0366 Glycosidases YP_008172414.1 COG1733 Predicted transcriptional regulators YP_008172415.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008172416.1 COG0753 Catalase YP_008172417.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008172418.1 COG0583 Transcriptional regulator YP_008172419.1 COG2939 Carboxypeptidase C (cathepsin A) YP_008172420.1 COG3124 Uncharacterized protein conserved in bacteria YP_008172421.1 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA YP_008172422.1 COG0534 Na+-driven multidrug efflux pump YP_008172423.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_008172424.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_008172425.1 COG3147 Uncharacterized protein conserved in bacteria YP_008172426.1 COG0285 Folylpolyglutamate synthase YP_008172427.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_008172429.1 COG0101 Pseudouridylate synthase YP_008172430.1 COG3170 Tfp pilus assembly protein FimV YP_008172431.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008172432.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008172433.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_008172434.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008172435.1 COG3668 Plasmid stabilization system protein YP_008172436.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_008172437.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008172438.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008172439.1 COG3055 Uncharacterized protein conserved in bacteria YP_008172440.1 COG4121 Uncharacterized conserved protein YP_008172441.1 COG0459 Chaperonin GroEL (HSP60 family) YP_008172444.1 COG0346 Lactoylglutathione lyase and related lyases YP_008172445.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008172447.1 COG0789 Predicted transcriptional regulators YP_008172448.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008172450.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_008172451.1 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA YP_008172452.1 COG2031 Short chain fatty acids transporter YP_008172453.1 COG3292 Predicted periplasmic ligand-binding sensor domain YP_008172454.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_008172455.1 COG0612 Predicted Zn-dependent peptidases YP_008172457.1 COG3199 Uncharacterized conserved protein YP_008172458.1 COG3101 Uncharacterized protein conserved in bacteria YP_008172460.1 COG0824 Predicted thioesterase YP_008172461.1 COG3577 Predicted aspartyl protease YP_008172463.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008172464.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008172465.1 COG1309 Transcriptional regulator YP_008172466.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008172469.1 COG1309 Transcriptional regulator YP_008172470.1 COG4399 Uncharacterized protein conserved in bacteria YP_008172471.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008172475.1 COG1770 Protease II YP_008172476.1 COG2186 Transcriptional regulators YP_008172477.1 COG3067 Na+/H+ antiporter YP_008172478.1 COG1495 Disulfide bond formation protein DsbB YP_008172479.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008172481.1 COG2983 Uncharacterized conserved protein YP_008172482.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_008172483.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008172484.1 COG3100 Uncharacterized protein conserved in bacteria YP_008172485.1 COG0349 Ribonuclease D YP_008172486.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008172487.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008172488.1 COG3065 Starvation-inducible outer membrane lipoprotein YP_008172490.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_008172491.1 COG1199 Rad3-related DNA helicases YP_008172493.1 COG0671 Membrane-associated phospholipid phosphatase YP_008172496.1 COG0366 Glycosidases YP_008172500.1 COG2930 Uncharacterized conserved protein YP_008172501.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008172503.1 COG0040 ATP phosphoribosyltransferase YP_008172504.1 COG0141 Histidinol dehydrogenase YP_008172505.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008172506.1 COG0241 Histidinol phosphatase and related phosphatases YP_008172507.1 COG0118 Glutamine amidotransferase YP_008172508.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_008172509.1 COG0107 Imidazoleglycerol-phosphate synthase YP_008172510.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_008172512.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_008172513.1 COG2116 Formate/nitrite family of transporters YP_008172514.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_008172515.1 COG0681 Signal peptidase I YP_008172516.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008172517.1 COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily YP_008172518.1 COG0563 Adenylate kinase and related kinases YP_008172519.1 COG0326 Molecular chaperone, HSP90 family YP_008172520.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_008172522.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008172523.1 COG0718 Uncharacterized protein conserved in bacteria YP_008172524.1 COG2812 DNA polymerase III, gamma/tau subunits YP_008172525.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_008172526.1 COG3219 Uncharacterized protein conserved in bacteria YP_008172527.1 COG3220 Uncharacterized protein conserved in bacteria YP_008172529.1 COG3710 DNA-binding winged-HTH domains YP_008172531.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008172534.1 COG0457 FOG: TPR repeat YP_008172535.1 COG0277 FAD/FMN-containing dehydrogenases YP_008172536.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_008172537.1 COG1496 Uncharacterized conserved protein YP_008172538.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008172539.1 COG4105 DNA uptake lipoprotein YP_008172540.1 COG3806 Anti-sigma factor YP_008172541.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008172542.1 COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease YP_008172544.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172545.1 COG2907 Predicted NAD/FAD-binding protein YP_008172546.1 COG3496 Uncharacterized conserved protein YP_008172547.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_008172548.1 COG1360 Flagellar motor protein YP_008172549.1 COG1291 Flagellar motor component YP_008172550.1 COG1722 Exonuclease VII small subunit YP_008172551.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_008172552.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_008172553.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_008172554.1 COG0611 Thiamine monophosphate kinase YP_008172555.1 COG0781 Transcription termination factor YP_008172556.1 COG0054 Riboflavin synthase beta-chain YP_008172557.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_008172558.1 COG0307 Riboflavin synthase alpha chain YP_008172559.1 COG0117 Pyrimidine deaminase YP_008172560.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_008172561.1 COG0112 Glycine/serine hydroxymethyltransferase YP_008172562.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_008172563.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008172565.1 COG1066 Predicted ATP-dependent serine protease YP_008172567.1 COG0560 Phosphoserine phosphatase YP_008172569.1 COG0084 Mg-dependent DNase YP_008172570.1 COG0259 Pyridoxamine-phosphate oxidase YP_008172571.1 COG1159 GTPase YP_008172572.1 COG0571 dsRNA-specific ribonuclease YP_008172573.1 COG0681 Signal peptidase I YP_008172574.1 COG0481 Membrane GTPase LepA YP_008172575.1 COG3086 Positive regulator of sigma E activity YP_008172576.1 COG3026 Negative regulator of sigma E activity YP_008172577.1 COG3073 Negative regulator of sigma E activity YP_008172578.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008172579.1 COG0029 Aspartate oxidase YP_008172580.1 COG2030 Acyl dehydratase YP_008172582.1 COG2938 Uncharacterized conserved protein YP_008172583.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_008172584.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_008172585.1 COG0347 Nitrogen regulatory protein PII YP_008172586.1 COG0171 NAD synthase YP_008172587.1 COG4970 Tfp pilus assembly protein FimT YP_008172588.1 COG4968 Tfp pilus assembly protein PilE YP_008172590.1 COG4795 Type II secretory pathway, component PulJ YP_008172592.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008172593.1 COG4968 Tfp pilus assembly protein PilE YP_008172594.1 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 YP_008172595.1 COG4726 Tfp pilus assembly protein PilX YP_008172596.1 COG4966 Tfp pilus assembly protein PilW YP_008172598.1 COG0761 Penicillin tolerance protein YP_008172599.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_008172600.1 COG0597 Lipoprotein signal peptidase YP_008172601.1 COG0060 Isoleucyl-tRNA synthetase YP_008172602.1 COG0196 FAD synthase YP_008172603.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_008172604.1 COG0268 Ribosomal protein S20 YP_008172605.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172606.1 COG3173 Predicted aminoglycoside phosphotransferase YP_008172607.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172608.1 COG0385 Predicted Na+-dependent transporter YP_008172609.1 COG0583 Transcriptional regulator YP_008172610.1 COG2908 Uncharacterized protein conserved in bacteria YP_008172611.1 COG3176 Putative hemolysin YP_008172612.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008172614.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008172615.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008172616.1 COG0466 ATP-dependent Lon protease, bacterial type YP_008172617.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_008172618.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_008172619.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_008172620.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_008172621.1 COG3310 Uncharacterized protein conserved in bacteria YP_008172622.1 COG1720 Uncharacterized conserved protein YP_008172623.1 COG0442 Prolyl-tRNA synthetase YP_008172624.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_008172625.1 COG2829 Outer membrane phospholipase A YP_008172626.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_008172627.1 COG0840 Methyl-accepting chemotaxis protein YP_008172630.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_008172631.1 COG0516 IMP dehydrogenase/GMP reductase YP_008172632.1 COG1570 Exonuclease VII, large subunit YP_008172635.1 COG1160 Predicted GTPases YP_008172636.1 COG1520 FOG: WD40-like repeat YP_008172637.1 COG2976 Uncharacterized protein conserved in bacteria YP_008172638.1 COG0124 Histidyl-tRNA synthetase YP_008172639.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_008172640.1 COG1426 Uncharacterized protein conserved in bacteria YP_008172641.1 COG3063 Tfp pilus assembly protein PilF YP_008172642.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_008172643.1 COG0105 Nucleoside diphosphate kinase YP_008172644.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_008172645.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_008172646.1 COG0316 Uncharacterized conserved protein YP_008172647.1 COG0520 Selenocysteine lyase YP_008172648.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_008172649.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_008172650.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_008172651.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_008172652.1 COG1959 Predicted transcriptional regulator YP_008172653.1 COG2072 Predicted flavoprotein involved in K+ transport YP_008172654.1 COG1045 Serine acetyltransferase YP_008172655.1 COG0565 rRNA methylase YP_008172656.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_008172658.1 COG3279 Response regulator of the LytR/AlgR family YP_008172659.1 COG0341 Preprotein translocase subunit SecF YP_008172660.1 COG0342 Preprotein translocase subunit SecD YP_008172661.1 COG1862 Preprotein translocase subunit YajC YP_008172662.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_008172663.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_008172665.1 COG3789 Uncharacterized protein conserved in bacteria YP_008172666.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008172667.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008172669.1 COG3766 Predicted membrane protein YP_008172670.1 COG5463 Predicted integral membrane protein YP_008172671.1 COG0754 Glutathionylspermidine synthase YP_008172672.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008172674.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008172675.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_008172676.1 COG5621 Predicted secreted hydrolase YP_008172677.1 COG2066 Glutaminase YP_008172678.1 COG1785 Alkaline phosphatase YP_008172679.1 COG0835 Chemotaxis signal transduction protein YP_008172680.1 COG2224 Isocitrate lyase YP_008172681.1 COG0583 Transcriptional regulator YP_008172682.1 COG2225 Malate synthase YP_008172683.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008172684.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008172690.1 COG0277 FAD/FMN-containing dehydrogenases YP_008172691.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008172692.1 COG1434 Uncharacterized conserved protein YP_008172693.1 COG3176 Putative hemolysin YP_008172694.1 COG0457 FOG: TPR repeat YP_008172696.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008172697.1 COG0438 Glycosyltransferase YP_008172699.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008172700.1 COG0438 Glycosyltransferase YP_008172701.1 COG0726 Predicted xylanase/chitin deacetylase YP_008172703.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_008172704.1 COG0438 Glycosyltransferase YP_008172706.1 COG0438 Glycosyltransferase YP_008172708.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008172709.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_008172712.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_008172713.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008172715.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008172718.1 COG0726 Predicted xylanase/chitin deacetylase YP_008172719.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_008172720.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008172721.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_008172722.1 COG0489 ATPases involved in chromosome partitioning YP_008172724.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008172725.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_008172726.1 COG2827 Predicted endonuclease containing a URI domain YP_008172729.1 COG1391 Glutamine synthetase adenylyltransferase YP_008172731.1 COG1560 Lauroyl/myristoyl acyltransferase YP_008172733.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_008172734.1 COG1960 Acyl-CoA dehydrogenases YP_008172736.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008172737.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008172738.1 COG1435 Thymidine kinase YP_008172739.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008172740.1 COG1609 Transcriptional regulators YP_008172741.1 COG0035 Uracil phosphoribosyltransferase YP_008172743.1 COG1396 Predicted transcriptional regulators YP_008172749.1 COG1161 Predicted GTPases YP_008172750.1 COG0566 rRNA methylases YP_008172751.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008172752.1 COG4539 Predicted membrane protein YP_008172753.1 COG3187 Heat shock protein YP_008172754.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008172755.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008172756.1 COG1292 Choline-glycine betaine transporter YP_008172758.1 COG3129 Predicted SAM-dependent methyltransferase YP_008172759.1 COG0789 Predicted transcriptional regulators YP_008172761.1 COG0006 Xaa-Pro aminopeptidase YP_008172765.1 COG1960 Acyl-CoA dehydrogenases YP_008172766.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_008172771.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008172772.1 COG0642 Signal transduction histidine kinase YP_008172773.1 COG3072 Adenylate cyclase YP_008172774.1 COG3682 Predicted transcriptional regulator YP_008172777.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008172778.1 COG0346 Lactoylglutathione lyase and related lyases YP_008172779.1 COG4807 Uncharacterized protein conserved in bacteria YP_008172780.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008172781.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs YP_008172782.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008172783.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008172784.1 COG4206 Outer membrane cobalamin receptor protein YP_008172786.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008172787.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_008172788.1 COG0693 Putative intracellular protease/amidase YP_008172789.1 COG1295 Predicted membrane protein YP_008172791.1 COG4681 Uncharacterized protein conserved in bacteria YP_008172796.1 COG0778 Nitroreductase YP_008172797.1 COG0477 Permeases of the major facilitator superfamily YP_008172798.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008172800.1 COG0514 Superfamily II DNA helicase YP_008172802.1 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain YP_008172804.1 COG0642 Signal transduction histidine kinase YP_008172806.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008172807.1 COG2801 Transposase and inactivated derivatives YP_008172808.1 COG2963 Transposase and inactivated derivatives YP_008172811.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_008172812.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_008172815.1 COG0714 MoxR-like ATPases YP_008172819.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008172822.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008172823.1 COG2608 Copper chaperone YP_008172825.1 COG0789 Predicted transcriptional regulators YP_008172826.1 COG0582 Integrase YP_008172827.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008172828.1 COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II YP_008172829.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_008172831.1 COG3696 Putative silver efflux pump YP_008172832.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_008172833.1 COG3696 Putative silver efflux pump YP_008172834.1 COG0845 Membrane-fusion protein YP_008172835.1 COG1538 Outer membrane protein YP_008172837.1 COG1230 Co/Zn/Cd efflux system component YP_008172839.1 COG1230 Co/Zn/Cd efflux system component YP_008172840.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008172841.1 COG3436 Transposase and inactivated derivatives YP_008172842.1 COG2133 Glucose/sorbosone dehydrogenases YP_008172843.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_008172845.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_008172846.1 COG0830 Urease accessory protein UreF YP_008172847.1 COG2371 Urease accessory protein UreE YP_008172848.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_008172849.1 COG0832 Urea amidohydrolase (urease) beta subunit YP_008172850.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_008172851.1 COG0829 Urease accessory protein UreH YP_008172852.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_008172853.1 COG4674 Uncharacterized ABC-type transport system, ATPase component YP_008172854.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_008172855.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_008172856.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_008172858.1 COG0642 Signal transduction histidine kinase YP_008172859.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008172860.1 COG3177 Uncharacterized conserved protein YP_008172862.1 COG3385 FOG: Transposase and inactivated derivatives YP_008172863.1 COG3513 Uncharacterized protein conserved in bacteria YP_008172864.1 COG1467 Eukaryotic-type DNA primase, catalytic (small) subunit YP_008172865.1 COG3436 Transposase and inactivated derivatives YP_008172869.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_008172870.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_008172871.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_008172872.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase YP_008172873.1 COG2971 Predicted N-acetylglucosamine kinase YP_008172874.1 COG0583 Transcriptional regulator YP_008172875.1 COG1620 L-lactate permease YP_008172876.1 COG0618 Exopolyphosphatase-related proteins YP_008172877.1 COG0006 Xaa-Pro aminopeptidase YP_008172878.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008172880.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008172881.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008172882.1 COG0006 Xaa-Pro aminopeptidase YP_008172883.1 COG3079 Uncharacterized protein conserved in bacteria YP_008172884.1 COG0524 Sugar kinases, ribokinase family YP_008172885.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_008172886.1 COG2203 FOG: GAF domain YP_008172887.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_008172888.1 COG0120 Ribose 5-phosphate isomerase YP_008172889.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008172890.1 COG3137 Putative salt-induced outer membrane protein YP_008172891.1 COG3137 Putative salt-induced outer membrane protein YP_008172892.1 COG1639 Predicted signal transduction protein YP_008172893.1 COG3313 Predicted Fe-S protein YP_008172894.1 COG2859 Uncharacterized protein conserved in bacteria YP_008172895.1 COG0841 Cation/multidrug efflux pump YP_008172896.1 COG0845 Membrane-fusion protein YP_008172897.1 COG0583 Transcriptional regulator YP_008172899.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008172900.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008172901.1 COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component YP_008172902.1 COG2186 Transcriptional regulators YP_008172903.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB YP_008172904.1 COG3023 Negative regulator of beta-lactamase expression YP_008172905.1 COG3577 Predicted aspartyl protease YP_008172906.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_008172907.1 COG4969 Tfp pilus assembly protein, major pilin PilA YP_008172908.1 COG1459 Type II secretory pathway, component PulF YP_008172909.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_008172910.1 COG0237 Dephospho-CoA kinase YP_008172911.1 COG4582 Uncharacterized protein conserved in bacteria YP_008172912.1 COG3024 Uncharacterized protein conserved in bacteria YP_008172913.1 COG2988 Succinylglutamate desuccinylase YP_008172914.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008172915.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_008172916.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008172917.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_008172918.1 COG0206 Cell division GTPase YP_008172919.1 COG0849 Actin-like ATPase involved in cell division YP_008172920.1 COG1589 Cell division septal protein YP_008172921.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_008172922.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_008172923.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_008172924.1 COG0772 Bacterial cell division membrane protein YP_008172925.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_008172926.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_008172927.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_008172928.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_008172929.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_008172930.1 COG3116 Cell division protein YP_008172931.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_008172932.1 COG2001 Uncharacterized protein conserved in bacteria YP_008172935.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_008172936.1 COG3696 Putative silver efflux pump YP_008172937.1 COG3696 Putative silver efflux pump YP_008172941.1 COG2267 Lysophospholipase YP_008172942.1 COG0678 Peroxiredoxin YP_008172943.1 COG1192 ATPases involved in chromosome partitioning YP_008172944.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008172945.1 COG2199 FOG: GGDEF domain YP_008172946.1 COG3791 Uncharacterized conserved protein YP_008172947.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008172948.1 COG0642 Signal transduction histidine kinase YP_008172949.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008172952.1 COG3391 Uncharacterized conserved protein YP_008172953.1 COG0501 Zn-dependent protease with chaperone function YP_008172954.1 COG0668 Small-conductance mechanosensitive channel YP_008172955.1 COG1385 Uncharacterized protein conserved in bacteria YP_008172956.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008172957.1 COG1678 Putative transcriptional regulator YP_008172958.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_008172960.1 COG5008 Tfp pilus assembly protein, ATPase PilU YP_008172961.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_008172962.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_008172963.1 COG0345 Pyrroline-5-carboxylate reductase YP_008172964.1 COG0762 Predicted integral membrane protein YP_008172966.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008172967.1 COG0346 Lactoylglutathione lyase and related lyases YP_008172968.1 COG4805 Uncharacterized protein conserved in bacteria YP_008172969.1 COG0625 Glutathione S-transferase YP_008172970.1 COG2032 Cu/Zn superoxide dismutase YP_008172971.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_008172972.1 COG0225 Peptide methionine sulfoxide reductase YP_008172973.1 COG2323 Predicted membrane protein YP_008172975.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_008172976.1 COG1396 Predicted transcriptional regulators YP_008172977.1 COG2814 Arabinose efflux permease YP_008172978.1 COG0724 RNA-binding proteins (RRM domain) YP_008172979.1 COG3022 Uncharacterized protein conserved in bacteria YP_008172981.1 COG0176 Transaldolase YP_008172982.1 COG0166 Glucose-6-phosphate isomerase YP_008172984.1 COG0692 Uracil DNA glycosylase YP_008172985.1 COG0498 Threonine synthase YP_008172986.1 COG0083 Homoserine kinase YP_008172987.1 COG0527 Aspartokinases YP_008172988.1 COG0178 Excinuclease ATPase subunit YP_008172989.1 COG0583 Transcriptional regulator YP_008172990.1 COG1062 Zn-dependent alcohol dehydrogenases, class III YP_008172992.1 COG0640 Predicted transcriptional regulators YP_008172993.1 COG0394 Protein-tyrosine-phosphatase YP_008172994.1 COG0431 Predicted flavoprotein YP_008172995.1 COG0798 Arsenite efflux pump ACR3 and related permeases YP_008172996.1 COG0784 FOG: CheY-like receiver YP_008172997.1 COG4579 Isocitrate dehydrogenase kinase/phosphatase YP_008172998.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008172999.1 COG0642 Signal transduction histidine kinase YP_008173002.1 COG2515 1-aminocyclopropane-1-carboxylate deaminase YP_008173004.1 COG3000 Sterol desaturase YP_008173006.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008173008.1 COG1748 Saccharopine dehydrogenase and related proteins YP_008173009.1 COG0019 Diaminopimelate decarboxylase YP_008173011.1 COG0313 Predicted methyltransferases YP_008173012.1 COG3107 Putative lipoprotein YP_008173013.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_008173015.1 COG0438 Glycosyltransferase YP_008173016.1 COG0279 Phosphoheptose isomerase YP_008173017.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_008173018.1 COG0477 Permeases of the major facilitator superfamily YP_008173020.1 COG2076 Membrane transporters of cations and cationic drugs YP_008173021.1 COG4585 Signal transduction histidine kinase YP_008173022.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008173025.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173026.1 COG1802 Transcriptional regulators YP_008173027.1 COG2513 PEP phosphonomutase and related enzymes YP_008173028.1 COG0372 Citrate synthase YP_008173029.1 COG1048 Aconitase A YP_008173030.1 COG2828 Uncharacterized protein conserved in bacteria YP_008173031.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008173032.1 COG1940 Transcriptional regulator/sugar kinase YP_008173033.1 COG2379 Putative glycerate kinase YP_008173034.1 COG0591 Na+/proline symporter YP_008173035.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173036.1 COG1626 Neutral trehalase YP_008173037.1 COG2942 N-acyl-D-glucosamine 2-epimerase YP_008173038.1 COG3428 Predicted membrane protein YP_008173039.1 COG3402 Uncharacterized conserved protein YP_008173040.1 COG0642 Signal transduction histidine kinase YP_008173041.1 COG3023 Negative regulator of beta-lactamase expression YP_008173042.1 COG0067 Glutamate synthase domain 1 YP_008173043.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_008173046.1 COG0775 Nucleoside phosphorylase YP_008173047.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB YP_008173048.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_008173049.1 COG0607 Rhodanese-related sulfurtransferase YP_008173051.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008173052.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_008173053.1 COG0162 Tyrosyl-tRNA synthetase YP_008173055.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008173056.1 COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases YP_008173057.1 COG0738 Fucose permease YP_008173058.1 COG3659 Carbohydrate-selective porin YP_008173059.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008173060.1 COG3832 Uncharacterized conserved protein YP_008173061.1 COG2873 O-acetylhomoserine sulfhydrylase YP_008173062.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008173063.1 COG0625 Glutathione S-transferase YP_008173064.1 COG0316 Uncharacterized conserved protein YP_008173066.1 COG2326 Uncharacterized conserved protein YP_008173067.1 COG0851 Septum formation topological specificity factor YP_008173068.1 COG2894 Septum formation inhibitor-activating ATPase YP_008173069.1 COG0850 Septum formation inhibitor YP_008173070.1 COG0114 Fumarase YP_008173071.1 COG3241 Azurin YP_008173073.1 COG0038 Chloride channel protein EriC YP_008173074.1 COG1981 Predicted membrane protein YP_008173077.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_008173078.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_008173079.1 COG0784 FOG: CheY-like receiver YP_008173080.1 COG1217 Predicted membrane GTPase involved in stress response YP_008173082.1 COG0174 Glutamine synthetase YP_008173084.1 COG3852 Signal transduction histidine kinase, nitrogen specific YP_008173085.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008173086.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008173087.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008173088.1 COG3076 Uncharacterized protein conserved in bacteria YP_008173090.1 COG2202 FOG: PAS/PAC domain YP_008173091.1 COG4877 Uncharacterized protein conserved in bacteria YP_008173092.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008173093.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_008173094.1 COG0642 Signal transduction histidine kinase YP_008173095.1 COG0525 Valyl-tRNA synthetase YP_008173096.1 COG2927 DNA polymerase III, chi subunit YP_008173097.1 COG0260 Leucyl aminopeptidase YP_008173098.1 COG0795 Predicted permeases YP_008173099.1 COG0795 Predicted permeases YP_008173100.1 COG1714 Predicted membrane protein/domain YP_008173101.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173102.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008173103.1 COG5343 Uncharacterized protein conserved in bacteria YP_008173105.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_008173108.1 COG3668 Plasmid stabilization system protein YP_008173109.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_008173111.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008173112.1 COG0457 FOG: TPR repeat YP_008173115.1 COG1802 Transcriptional regulators YP_008173117.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008173119.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_008173120.1 COG3661 Alpha-glucuronidase YP_008173121.1 COG3507 Beta-xylosidase YP_008173123.1 COG2199 FOG: GGDEF domain YP_008173125.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008173126.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008173127.1 COG1397 ADP-ribosylglycohydrolase YP_008173128.1 COG0673 Predicted dehydrogenases and related proteins YP_008173129.1 COG0642 Signal transduction histidine kinase YP_008173130.1 COG0628 Predicted permease YP_008173132.1 COG0748 Putative heme iron utilization protein YP_008173133.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_008173134.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008173135.1 COG4558 ABC-type hemin transport system, periplasmic component YP_008173137.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008173139.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_008173140.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008173142.1 COG4796 Type II secretory pathway, component HofQ YP_008173143.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173146.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_008173147.1 COG1283 Na+/phosphate symporter YP_008173148.1 COG0397 Uncharacterized conserved protein YP_008173149.1 COG0006 Xaa-Pro aminopeptidase YP_008173150.1 COG0499 S-adenosylhomocysteine hydrolase YP_008173151.1 COG2010 Cytochrome c, mono- and diheme variants YP_008173152.1 COG4993 Glucose dehydrogenase YP_008173153.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008173155.1 COG3391 Uncharacterized conserved protein YP_008173156.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008173157.1 COG0842 ABC-type multidrug transport system, permease component YP_008173158.1 COG0260 Leucyl aminopeptidase YP_008173159.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_008173160.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_008173162.1 COG0535 Predicted Fe-S oxidoreductases YP_008173163.1 COG1026 Predicted Zn-dependent peptidases, insulinase-like YP_008173164.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173167.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008173168.1 COG0642 Signal transduction histidine kinase YP_008173169.1 COG3287 Uncharacterized conserved protein YP_008173170.1 COG3901 Regulator of nitric oxide reductase transcription YP_008173171.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008173172.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008173173.1 COG4585 Signal transduction histidine kinase YP_008173174.1 COG2202 FOG: PAS/PAC domain YP_008173175.1 COG0583 Transcriptional regulator YP_008173176.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008173177.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_008173178.1 COG1292 Choline-glycine betaine transporter YP_008173179.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008173180.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008173181.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173182.1 COG1409 Predicted phosphohydrolases YP_008173183.1 COG0583 Transcriptional regulator YP_008173184.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_008173185.1 COG0277 FAD/FMN-containing dehydrogenases YP_008173186.1 COG2771 DNA-binding HTH domain-containing proteins YP_008173187.1 COG1462 Uncharacterized protein involved in formation of curli polymers YP_008173189.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_008173192.1 COG1404 Subtilisin-like serine proteases YP_008173193.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008173194.1 COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific YP_008173195.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008173196.1 COG3971 2-keto-4-pentenoate hydratase YP_008173197.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_008173198.1 COG0513 Superfamily II DNA and RNA helicases YP_008173201.1 COG2199 FOG: GGDEF domain YP_008173204.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008173205.1 COG0524 Sugar kinases, ribokinase family YP_008173206.1 COG0524 Sugar kinases, ribokinase family YP_008173208.1 COG2186 Transcriptional regulators YP_008173209.1 COG3264 Small-conductance mechanosensitive channel YP_008173211.1 COG0376 Catalase (peroxidase I) YP_008173213.1 COG2202 FOG: PAS/PAC domain YP_008173214.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_008173215.1 COG3568 Metal-dependent hydrolase YP_008173216.1 COG0583 Transcriptional regulator YP_008173217.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173218.1 COG0730 Predicted permeases YP_008173219.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008173220.1 COG0784 FOG: CheY-like receiver YP_008173221.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_008173222.1 COG0642 Signal transduction histidine kinase YP_008173223.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008173224.1 COG0417 DNA polymerase elongation subunit (family B) YP_008173226.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008173228.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008173229.1 COG1309 Transcriptional regulator YP_008173230.1 COG1398 Fatty-acid desaturase YP_008173231.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008173233.1 COG1573 Uracil-DNA glycosylase YP_008173234.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008173236.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008173237.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_008173238.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_008173240.1 COG5345 Uncharacterized protein conserved in bacteria YP_008173242.1 COG1983 Putative stress-responsive transcriptional regulator YP_008173243.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008173245.1 COG0042 tRNA-dihydrouridine synthase YP_008173250.1 COG1196 Chromosome segregation ATPases YP_008173251.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008173252.1 COG1100 GTPase SAR1 and related small G proteins YP_008173253.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008173254.1 COG0627 Predicted esterase YP_008173255.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008173256.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008173257.1 COG0668 Small-conductance mechanosensitive channel YP_008173260.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008173261.1 COG0733 Na+-dependent transporters of the SNF family YP_008173262.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008173263.1 COG3011 Uncharacterized protein conserved in bacteria YP_008173264.1 COG0225 Peptide methionine sulfoxide reductase YP_008173267.1 COG0716 Flavodoxins YP_008173269.1 COG0848 Biopolymer transport protein YP_008173270.1 COG0587 DNA polymerase III, alpha subunit YP_008173272.1 COG0457 FOG: TPR repeat YP_008173273.1 COG3405 Endoglucanase Y YP_008173274.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_008173276.1 COG4123 Predicted O-methyltransferase YP_008173277.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008173278.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008173280.1 COG2199 FOG: GGDEF domain YP_008173281.1 COG1171 Threonine dehydratase YP_008173282.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_008173283.1 COG0531 Amino acid transporters YP_008173284.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008173285.1 COG0346 Lactoylglutathione lyase and related lyases YP_008173286.1 COG0583 Transcriptional regulator YP_008173287.1 COG0121 Predicted glutamine amidotransferase YP_008173289.1 COG4682 Predicted membrane protein YP_008173293.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_008173294.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173295.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008173296.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008173297.1 COG0778 Nitroreductase YP_008173298.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008173299.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008173300.1 COG1335 Amidases related to nicotinamidase YP_008173301.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008173302.1 COG1309 Transcriptional regulator YP_008173303.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008173304.1 COG3000 Sterol desaturase YP_008173305.1 COG4628 Uncharacterized conserved protein YP_008173306.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008173307.1 COG4728 Uncharacterized protein conserved in bacteria YP_008173308.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008173309.1 COG1396 Predicted transcriptional regulators YP_008173310.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008173311.1 COG2991 Uncharacterized protein conserved in bacteria YP_008173312.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_008173313.1 COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF YP_008173314.1 COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE YP_008173315.1 COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD YP_008173316.1 COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC YP_008173317.1 COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB YP_008173318.1 COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA YP_008173319.1 COG3007 Uncharacterized paraquat-inducible protein B YP_008173320.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008173321.1 COG2352 Phosphoenolpyruvate carboxylase YP_008173322.1 COG0376 Catalase (peroxidase I) YP_008173324.1 COG0039 Malate/lactate dehydrogenases YP_008173325.1 COG1438 Arginine repressor YP_008173326.1 COG0693 Putative intracellular protease/amidase YP_008173327.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008173328.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_008173330.1 COG0572 Uridine kinase YP_008173331.1 COG1972 Nucleoside permease YP_008173332.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_008173333.1 COG0457 FOG: TPR repeat YP_008173335.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008173336.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008173337.1 COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains YP_008173338.1 COG4147 Predicted symporter YP_008173339.1 COG4327 Predicted membrane protein YP_008173340.1 COG0591 Na+/proline symporter YP_008173341.1 COG0668 Small-conductance mechanosensitive channel YP_008173342.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008173343.1 COG3608 Predicted deacylase YP_008173344.1 COG4067 Uncharacterized protein conserved in archaea YP_008173346.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008173347.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008173348.1 COG2238 Ribosomal protein S19E (S16A) YP_008173349.1 COG1283 Na+/phosphate symporter YP_008173350.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008173351.1 COG3211 Predicted phosphatase YP_008173352.1 COG2202 FOG: PAS/PAC domain YP_008173353.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_008173354.1 COG1654 Biotin operon repressor YP_008173355.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_008173356.1 COG1538 Outer membrane protein YP_008173357.1 COG0845 Membrane-fusion protein YP_008173358.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008173359.1 COG0583 Transcriptional regulator YP_008173360.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_008173361.1 COG3744 Uncharacterized protein conserved in bacteria YP_008173362.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_008173363.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_008173364.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008173365.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_008173366.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_008173367.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_008173368.1 COG1209 dTDP-glucose pyrophosphorylase YP_008173369.1 COG0457 FOG: TPR repeat YP_008173370.1 COG0438 Glycosyltransferase YP_008173371.1 COG1216 Predicted glycosyltransferases YP_008173372.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008173385.1 COG0499 S-adenosylhomocysteine hydrolase YP_008173386.1 COG3754 Lipopolysaccharide biosynthesis protein YP_008173387.1 COG5610 Predicted hydrolase (HAD superfamily) YP_008173388.1 COG1344 Flagellin and related hook-associated proteins YP_008173389.1 COG4115 Uncharacterized protein conserved in bacteria YP_008173390.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008173391.1 COG3551 Uncharacterized protein conserved in bacteria YP_008173392.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_008173393.1 COG0203 Ribosomal protein L17 YP_008173394.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_008173395.1 COG0522 Ribosomal protein S4 and related proteins YP_008173396.1 COG0100 Ribosomal protein S11 YP_008173397.1 COG0099 Ribosomal protein S13 YP_008173398.1 COG0257 Ribosomal protein L36 YP_008173399.1 COG0201 Preprotein translocase subunit SecY YP_008173400.1 COG0200 Ribosomal protein L15 YP_008173401.1 COG1841 Ribosomal protein L30/L7E YP_008173402.1 COG0098 Ribosomal protein S5 YP_008173403.1 COG0256 Ribosomal protein L18 YP_008173404.1 COG0097 Ribosomal protein L6P/L9E YP_008173405.1 COG0096 Ribosomal protein S8 YP_008173406.1 COG0199 Ribosomal protein S14 YP_008173407.1 COG0094 Ribosomal protein L5 YP_008173408.1 COG0198 Ribosomal protein L24 YP_008173409.1 COG0093 Ribosomal protein L14 YP_008173410.1 COG0642 Signal transduction histidine kinase YP_008173412.1 COG1404 Subtilisin-like serine proteases YP_008173413.1 COG0457 FOG: TPR repeat YP_008173414.1 COG0566 rRNA methylases YP_008173415.1 COG0557 Exoribonuclease R YP_008173416.1 COG3093 Plasmid maintenance system antidote protein YP_008173418.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_008173419.1 COG3668 Plasmid stabilization system protein YP_008173420.1 COG3905 Predicted transcriptional regulator YP_008173421.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173422.1 COG5591 Uncharacterized conserved protein YP_008173423.1 COG3658 Cytochrome b YP_008173424.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008173426.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_008173427.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_008173428.1 COG5611 Predicted nucleic-acid-binding protein, contains PIN domain YP_008173429.1 COG2002 Regulators of stationary/sporulation gene expression YP_008173430.1 COG2234 Predicted aminopeptidases YP_008173431.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008173432.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008173433.1 COG1510 Predicted transcriptional regulators YP_008173434.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008173435.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008173436.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_008173437.1 COG1522 Transcriptional regulators YP_008173439.1 COG1278 Cold shock proteins YP_008173440.1 COG0661 Predicted unusual protein kinase YP_008173441.1 COG3165 Uncharacterized protein conserved in bacteria YP_008173442.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_008173443.1 COG2818 3-methyladenine DNA glycosylase YP_008173444.1 COG0339 Zn-dependent oligopeptidases YP_008173445.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008173446.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_008173447.1 COG0642 Signal transduction histidine kinase YP_008173448.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008173449.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008173450.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008173451.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008173454.1 COG0457 FOG: TPR repeat YP_008173455.1 COG1262 Uncharacterized conserved protein YP_008173460.1 COG1257 Hydroxymethylglutaryl-CoA reductase YP_008173461.1 COG0845 Membrane-fusion protein YP_008173462.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008173463.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008173465.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008173466.1 COG2002 Regulators of stationary/sporulation gene expression YP_008173468.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_008173469.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_008173470.1 COG3087 Cell division protein YP_008173471.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_008173472.1 COG0254 Ribosomal protein L31 YP_008173474.1 COG0281 Malic enzyme YP_008173475.1 COG3060 Transcriptional regulator of met regulon YP_008173476.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_008173477.1 COG1295 Predicted membrane protein YP_008173480.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008173481.1 COG1490 D-Tyr-tRNAtyr deacylase YP_008173482.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008173483.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008173484.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_008173485.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_008173486.1 COG2177 Cell division protein YP_008173487.1 COG2884 Predicted ATPase involved in cell division YP_008173488.1 COG0742 N6-adenine-specific methylase YP_008173489.1 COG3068 Uncharacterized protein conserved in bacteria YP_008173490.1 COG2095 Multiple antibiotic transporter YP_008173492.1 COG0260 Leucyl aminopeptidase YP_008173493.1 COG1489 DNA-binding protein, stimulates sugar fermentation YP_008173494.1 COG1734 DnaK suppressor protein YP_008173495.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008173496.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_008173497.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008173498.1 COG0413 Ketopantoate hydroxymethyltransferase YP_008173499.1 COG0414 Panthothenate synthetase YP_008173500.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_008173501.1 COG2200 FOG: EAL domain YP_008173502.1 COG0500 SAM-dependent methyltransferases YP_008173503.1 COG0842 ABC-type multidrug transport system, permease component YP_008173504.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008173505.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008173506.1 COG0642 Signal transduction histidine kinase YP_008173507.1 COG4774 Outer membrane receptor for monomeric catechols YP_008173508.1 COG3128 Uncharacterized iron-regulated protein YP_008173509.1 COG3794 Plastocyanin YP_008173510.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008173511.1 COG1253 Hemolysins and related proteins containing CBS domains YP_008173512.1 COG0701 Predicted permeases YP_008173513.1 COG1966 Carbon starvation protein, predicted membrane protein YP_008173514.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008173515.1 COG0657 Esterase/lipase YP_008173516.1 COG3735 Uncharacterized protein conserved in bacteria YP_008173517.1 COG3293 Transposase and inactivated derivatives YP_008173518.1 COG0050 GTPases - translation elongation factors YP_008173519.1 COG0050 GTPases - translation elongation factors YP_008173520.1 COG0480 Translation elongation factors (GTPases) YP_008173521.1 COG0049 Ribosomal protein S7 YP_008173522.1 COG0048 Ribosomal protein S12 YP_008173523.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_008173524.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_008173525.1 COG0222 Ribosomal protein L7/L12 YP_008173526.1 COG0244 Ribosomal protein L10 YP_008173527.1 COG0081 Ribosomal protein L1 YP_008173528.1 COG0080 Ribosomal protein L11 YP_008173532.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_008173533.1 COG0250 Transcription antiterminator YP_008173534.1 COG0690 Preprotein translocase subunit SecE YP_008173535.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008173536.1 COG0684 Demethylmenaquinone methyltransferase YP_008173537.1 COG3590 Predicted metalloendopeptidase YP_008173538.1 COG3602 Uncharacterized protein conserved in bacteria YP_008173539.1 COG0513 Superfamily II DNA and RNA helicases YP_008173540.1 COG0418 Dihydroorotase YP_008173541.1 COG3040 Bacterial lipocalin YP_008173542.1 COG4989 Predicted oxidoreductase YP_008173543.1 COG0346 Lactoylglutathione lyase and related lyases YP_008173544.1 COG0668 Small-conductance mechanosensitive channel YP_008173545.1 COG0738 Fucose permease YP_008173546.1 COG0366 Glycosidases YP_008173548.1 COG0302 GTP cyclohydrolase I YP_008173549.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008173550.1 COG2957 Peptidylarginine deiminase and related enzymes YP_008173551.1 COG0388 Predicted amidohydrolase YP_008173552.1 COG1407 Predicted ICC-like phosphoesterases YP_008173553.1 COG1201 Lhr-like helicases YP_008173554.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_008173555.1 COG1793 ATP-dependent DNA ligase YP_008173556.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_008173557.1 COG0524 Sugar kinases, ribokinase family YP_008173558.1 COG1940 Transcriptional regulator/sugar kinase YP_008173559.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_008173560.1 COG0625 Glutathione S-transferase YP_008173561.1 COG0625 Glutathione S-transferase YP_008173563.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_008173564.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008173565.1 COG3651 Uncharacterized protein conserved in bacteria YP_008173566.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008173567.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008173569.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_008173570.1 COG2978 Putative p-aminobenzoyl-glutamate transporter YP_008173571.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008173572.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008173573.1 COG2262 GTPases YP_008173574.1 COG1923 Uncharacterized host factor I protein YP_008173575.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_008173576.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_008173577.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_008173578.1 COG0802 Predicted ATPase or kinase YP_008173579.1 COG0062 Uncharacterized conserved protein YP_008173580.1 COG1600 Uncharacterized Fe-S protein YP_008173582.1 COG0407 Uroporphyrinogen-III decarboxylase YP_008173583.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding YP_008173584.1 COG3160 Regulator of sigma D YP_008173585.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_008173586.1 COG1406 Predicted inhibitor of MCP methylation, homolog of CheC YP_008173587.1 COG0432 Uncharacterized conserved protein YP_008173588.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008173589.1 COG0305 Replicative DNA helicase YP_008173591.1 COG3595 Uncharacterized conserved protein YP_008173592.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008173593.1 COG2258 Uncharacterized protein conserved in bacteria YP_008173595.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_008173596.1 COG0359 Ribosomal protein L9 YP_008173597.1 COG0238 Ribosomal protein S18 YP_008173598.1 COG0360 Ribosomal protein S6 YP_008173599.1 COG0642 Signal transduction histidine kinase YP_008173600.1 COG3141 Uncharacterized protein conserved in bacteria YP_008173601.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008173602.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_008173603.1 COG2202 FOG: PAS/PAC domain YP_008173604.1 COG0642 Signal transduction histidine kinase YP_008173605.1 COG0840 Methyl-accepting chemotaxis protein YP_008173607.1 COG1230 Co/Zn/Cd efflux system component YP_008173608.1 COG2273 Beta-glucanase/Beta-glucan synthetase YP_008173609.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173610.1 COG1757 Na+/H+ antiporter YP_008173611.1 COG1472 Beta-glucosidase-related glycosidases YP_008173612.1 COG0738 Fucose permease YP_008173613.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_008173614.1 COG1609 Transcriptional regulators YP_008173615.1 COG0477 Permeases of the major facilitator superfamily YP_008173616.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_008173617.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_008173618.1 COG4890 Predicted outer membrane lipoprotein YP_008173619.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008173620.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008173622.1 COG2202 FOG: PAS/PAC domain YP_008173624.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173625.1 COG0730 Predicted permeases YP_008173627.1 COG4319 Ketosteroid isomerase homolog YP_008173628.1 COG2503 Predicted secreted acid phosphatase YP_008173629.1 COG2199 FOG: GGDEF domain YP_008173630.1 COG0477 Permeases of the major facilitator superfamily YP_008173631.1 COG2375 Siderophore-interacting protein YP_008173632.1 COG3237 Uncharacterized protein conserved in bacteria YP_008173636.1 COG1186 Protein chain release factor B YP_008173637.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008173639.1 COG0517 FOG: CBS domain YP_008173641.1 COG3038 Cytochrome B561 YP_008173642.1 COG2353 Uncharacterized conserved protein YP_008173643.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_008173644.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173646.1 COG0583 Transcriptional regulator YP_008173647.1 COG2067 Long-chain fatty acid transport protein YP_008173648.1 COG2130 Putative NADP-dependent oxidoreductases YP_008173649.1 COG2199 FOG: GGDEF domain YP_008173650.1 COG0642 Signal transduction histidine kinase YP_008173651.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008173652.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_008173653.1 COG1349 Transcriptional regulators of sugar metabolism YP_008173654.1 COG0673 Predicted dehydrogenases and related proteins YP_008173655.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_008173656.1 COG2199 FOG: GGDEF domain YP_008173657.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008173658.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_008173659.1 COG2169 Adenosine deaminase YP_008173660.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008173661.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_008173663.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_008173664.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_008173665.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_008173666.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173670.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008173671.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008173672.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008173674.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008173675.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_008173676.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_008173677.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_008173678.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_008173679.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_008173681.1 COG4456 Virulence-associated protein and related proteins YP_008173682.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_008173683.1 COG0582 Integrase YP_008173686.1 COG0459 Chaperonin GroEL (HSP60 family) YP_008173687.1 COG0234 Co-chaperonin GroES (HSP10) YP_008173688.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_008173689.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_008173690.1 COG4232 Thiol:disulfide interchange protein YP_008173691.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008173692.1 COG0757 3-dehydroquinate dehydratase II YP_008173693.1 COG0511 Biotin carboxyl carrier protein YP_008173694.1 COG0439 Biotin carboxylase YP_008173698.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008173699.1 COG1403 Restriction endonuclease YP_008173701.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008173703.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008173704.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008173705.1 COG2264 Ribosomal protein L11 methylase YP_008173706.1 COG0042 tRNA-dihydrouridine synthase YP_008173707.1 COG2901 Factor for inversion stimulation Fis, transcriptional activator YP_008173708.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_008173709.1 COG4798 Predicted methyltransferase YP_008173710.1 COG0151 Phosphoribosylamine-glycine ligase YP_008173711.1 COG2992 Uncharacterized FlgJ-related protein YP_008173713.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008173714.1 COG3954 Phosphoribulokinase YP_008173716.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008173718.1 COG0642 Signal transduction histidine kinase YP_008173719.1 COG0477 Permeases of the major facilitator superfamily YP_008173720.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases YP_008173721.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_008173722.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_008173723.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_008173724.1 COG3031 Type II secretory pathway, component PulC YP_008173725.1 COG1450 Type II secretory pathway, component PulD YP_008173726.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008173727.1 COG1459 Type II secretory pathway, component PulF YP_008173728.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008173729.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008173730.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008173731.1 COG4795 Type II secretory pathway, component PulJ YP_008173732.1 COG3156 Type II secretory pathway, component PulK YP_008173733.1 COG3297 Type II secretory pathway, component PulL YP_008173734.1 COG3149 Type II secretory pathway, component PulM YP_008173736.1 COG5339 Uncharacterized protein conserved in bacteria YP_008173737.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008173738.1 COG1986 Uncharacterized conserved protein YP_008173739.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008173740.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008173741.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_008173742.1 COG2353 Uncharacterized conserved protein YP_008173743.1 COG2943 Membrane glycosyltransferase YP_008173744.1 COG3131 Periplasmic glucans biosynthesis protein YP_008173746.1 COG3089 Uncharacterized protein conserved in bacteria YP_008173747.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold YP_008173748.1 COG5589 Uncharacterized conserved protein YP_008173749.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008173750.1 COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain YP_008173753.1 COG2900 Uncharacterized protein conserved in bacteria YP_008173754.1 COG2319 FOG: WD40 repeat YP_008173755.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008173757.1 COG0782 Transcription elongation factor YP_008173758.1 COG2183 Transcriptional accessory protein YP_008173759.1 COG4870 Cysteine protease YP_008173762.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008173763.1 COG1040 Predicted amidophosphoribosyltransferases YP_008173765.1 COG0316 Uncharacterized conserved protein YP_008173767.1 COG1794 Aspartate racemase YP_008173768.1 COG0346 Lactoylglutathione lyase and related lyases YP_008173769.1 COG0534 Na+-driven multidrug efflux pump YP_008173770.1 COG0726 Predicted xylanase/chitin deacetylase YP_008173771.1 COG0456 Acetyltransferases YP_008173772.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_008173773.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_008173774.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_008173776.1 COG3346 Uncharacterized conserved protein YP_008173778.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_008173779.1 COG3175 Cytochrome oxidase assembly factor YP_008173780.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_008173781.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_008173782.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008173783.1 COG2203 FOG: GAF domain YP_008173784.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_008173785.1 COG1171 Threonine dehydratase YP_008173786.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008173788.1 COG2860 Predicted membrane protein YP_008173789.1 COG0606 Predicted ATPase with chaperone activity YP_008173790.1 COG0583 Transcriptional regulator YP_008173791.1 COG0059 Ketol-acid reductoisomerase YP_008173792.1 COG0477 Permeases of the major facilitator superfamily YP_008173793.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008173794.1 COG0729 Outer membrane protein YP_008173795.1 COG2911 Uncharacterized protein conserved in bacteria YP_008173797.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008173799.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008173800.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_008173801.1 COG0824 Predicted thioesterase YP_008173802.1 COG0263 Glutamate 5-kinase YP_008173803.1 COG0308 Aminopeptidase N YP_008173806.1 COG0661 Predicted unusual protein kinase YP_008173808.1 COG0468 RecA/RadA recombinase YP_008173809.1 COG3816 Uncharacterized protein conserved in bacteria YP_008173810.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_008173811.1 COG1238 Predicted membrane protein YP_008173815.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_008173816.1 COG0461 Orotate phosphoribosyltransferase YP_008173817.1 COG0689 RNase PH YP_008173819.1 COG1561 Uncharacterized stress-induced protein YP_008173820.1 COG0582 Integrase YP_008173821.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008173822.1 COG1396 Predicted transcriptional regulators YP_008173823.1 COG5499 Predicted transcription regulator containing HTH domain YP_008173824.1 COG4951 Uncharacterized protein conserved in bacteria YP_008173829.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_008173830.1 COG0732 Restriction endonuclease S subunits YP_008173831.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008173832.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_008173833.1 COG3655 Predicted transcriptional regulator YP_008173834.1 COG5519 Superfamily II helicase and inactivated derivatives YP_008173835.1 COG3311 Predicted transcriptional regulator YP_008173836.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_008173838.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008173839.1 COG1396 Predicted transcriptional regulators YP_008173840.1 COG4680 Uncharacterized protein conserved in bacteria YP_008173841.1 COG3177 Uncharacterized conserved protein YP_008173843.1 COG1609 Transcriptional regulators YP_008173845.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008173846.1 COG2206 HD-GYP domain YP_008173847.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase YP_008173848.1 COG3148 Uncharacterized conserved protein YP_008173849.1 COG0625 Glutathione S-transferase YP_008173851.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_008173852.1 COG0055 F0F1-type ATP synthase, beta subunit YP_008173853.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_008173854.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_008173855.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_008173856.1 COG0711 F0F1-type ATP synthase, subunit b YP_008173857.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_008173858.1 COG0356 F0F1-type ATP synthase, subunit a YP_008173859.1 COG3312 F0F1-type ATP synthase, subunit I YP_008173860.1 COG1475 Predicted transcriptional regulators YP_008173861.1 COG1192 ATPases involved in chromosome partitioning YP_008173862.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_008173863.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_008173864.1 COG1484 DNA replication protein YP_008173865.1 COG1291 Flagellar motor component YP_008173866.1 COG0716 Flavodoxins YP_008173867.1 COG0486 Predicted GTPase YP_008173868.1 COG1666 Uncharacterized protein conserved in bacteria YP_008173869.1 COG0706 Preprotein translocase subunit YidC YP_008173870.1 COG0759 Uncharacterized conserved protein YP_008173871.1 COG0594 RNase P protein component YP_008173873.1 COG3091 Uncharacterized protein conserved in bacteria YP_008173874.1 COG0827 Adenine-specific DNA methylase YP_008173885.1 COG1396 Predicted transcriptional regulators YP_008173889.1 COG1408 Predicted phosphohydrolases YP_008173890.1 COG1475 Predicted transcriptional regulators YP_008173895.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008173896.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008173901.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_008173902.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008173908.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_008173919.1 COG3293 Transposase and inactivated derivatives YP_008173938.1 COG0582 Integrase YP_008173939.1 COG2115 Xylose isomerase YP_008173941.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_008173943.1 COG0443 Molecular chaperone YP_008173954.1 COG0433 Predicted ATPase YP_008173959.1 COG0827 Adenine-specific DNA methylase YP_008173961.1 COG1651 Protein-disulfide isomerase YP_008173967.1 COG4932 Predicted outer membrane protein YP_008173972.1 COG0244 Ribosomal protein L10 YP_008173977.1 COG0582 Integrase YP_008173981.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008173984.1 COG2963 Transposase and inactivated derivatives YP_008173985.1 COG2801 Transposase and inactivated derivatives YP_008173987.1 COG2801 Transposase and inactivated derivatives YP_008173988.1 COG2963 Transposase and inactivated derivatives YP_008173993.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008173994.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008174000.1 COG0531 Amino acid transporters YP_008174001.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008174003.1 COG2030 Acyl dehydratase YP_008174004.1 COG0535 Predicted Fe-S oxidoreductases YP_008174005.1 COG3396 Uncharacterized conserved protein YP_008174006.1 COG2202 FOG: PAS/PAC domain YP_008174007.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008174008.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_008174009.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_008174011.1 COG1396 Predicted transcriptional regulators YP_008174012.1 COG1349 Transcriptional regulators of sugar metabolism YP_008174013.1 COG1061 DNA or RNA helicases of superfamily II YP_008174014.1 COG3209 Rhs family protein YP_008174016.1 COG3209 Rhs family protein YP_008174019.1 COG0457 FOG: TPR repeat YP_008174023.1 COG2378 Predicted transcriptional regulator YP_008174026.1 COG1309 Transcriptional regulator YP_008174028.1 COG4974 Site-specific recombinase XerD YP_008174034.1 COG4519 Uncharacterized protein conserved in bacteria YP_008174038.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_008174039.1 COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin YP_008174040.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174041.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174042.1 COG5310 Homospermidine synthase YP_008174043.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008174044.1 COG2366 Protein related to penicillin acylase YP_008174045.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174046.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_008174047.1 COG3251 Uncharacterized protein conserved in bacteria YP_008174048.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174050.1 COG0013 Alanyl-tRNA synthetase YP_008174051.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174052.1 COG2175 Probable taurine catabolism dioxygenase YP_008174053.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174054.1 COG3321 Polyketide synthase modules and related proteins YP_008174055.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174056.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174058.1 COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_008174060.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174061.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174062.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008174063.1 COG0346 Lactoylglutathione lyase and related lyases YP_008174065.1 COG2977 Phosphopantetheinyl transferase component of siderophore synthetase YP_008174069.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008174070.1 COG2801 Transposase and inactivated derivatives YP_008174072.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_008174074.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008174082.1 COG0210 Superfamily I DNA and RNA helicases YP_008174089.1 COG1459 Type II secretory pathway, component PulF YP_008174090.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008174093.1 COG1450 Type II secretory pathway, component PulD YP_008174097.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_008174108.1 COG3293 Transposase and inactivated derivatives YP_008174125.1 COG4584 Transposase and inactivated derivatives YP_008174126.1 COG1484 DNA replication protein YP_008174127.1 COG2974 DNA recombination-dependent growth factor C YP_008174129.1 COG2200 FOG: EAL domain YP_008174132.1 COG2199 FOG: GGDEF domain YP_008174134.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_008174136.1 COG3677 Transposase and inactivated derivatives YP_008174138.1 COG1835 Predicted acyltransferases YP_008174149.1 COG1192 ATPases involved in chromosome partitioning YP_008174150.1 COG1475 Predicted transcriptional regulators YP_008174153.1 COG1396 Predicted transcriptional regulators