-- dump date 20140618_193901 -- class Genbank::CDS -- table cds_note -- id note YP_003183455.1 KEGG: geo:Geob_0001 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_003183456.1 KEGG: amc:MADE_00003 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003183457.1 TIGRFAM: S4 domain protein YaaA; KEGG: gsu:GSU0464 S4 domain-containing protein YP_003183458.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: gme:Gmet_0003 recombination protein F YP_003183459.1 KEGG: glo:Glov_0004 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_003183460.1 KEGG: gur:Gura_0005 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_003183462.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family-related protein YP_003183463.1 KEGG: sat:SYN_03352 cytidine deaminase YP_003183465.1 KEGG: gsu:GSU2195 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein YP_003183466.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_003183467.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dds:Ddes_1897 SNO glutamine amidotransferase YP_003183468.1 KEGG: gbm:Gbem_0108 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like YP_003183470.1 PFAM: ABC transporter, ATPase, predicted; KEGG: dat:HRM2_34010 ATPase family protein YP_003183471.1 KEGG: pin:Ping_2688 hypothetical protein YP_003183472.1 PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: hypothetical protein YP_003183473.1 PFAM: protein of unknown function UPF0150; KEGG: dvl:Dvul_2770 hypothetical protein YP_003183475.1 PFAM: regulatory protein TetR; KEGG: scl:sce0067 TetR family transcriptional regulator YP_003183476.1 KEGG: xca:xccb100_3342 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III YP_003183477.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: mxa:MXAN_3034 putative ADP- ribosylglycohydrolase YP_003183479.1 KEGG: azo:azo3253 hypothetical protein YP_003183480.1 KEGG: ent:Ent638_3999 UDP-N-acetyl-D-mannosamine dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase ; 6-phosphogluconate dehydrogenase NAD-binding YP_003183481.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: sml:Smlt0232 putative isocitrate lyase YP_003183482.1 PFAM: major facilitator superfamily MFS_1; KEGG: sfu:Sfum_2384 major facilitator superfamily MFS_1 YP_003183483.1 PFAM: inner-membrane translocator; KEGG: scl:sce7756 uncharacterized ABC-type transport system,permease component YP_003183484.1 PFAM: inner-membrane translocator; KEGG: scl:sce7757 ABC transporter permease YP_003183485.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce7755 sugar ABC transporter, ATP- binding protein YP_003183486.1 PFAM: basic membrane lipoprotein; KEGG: mxa:MXAN_5711 Bmp family lipoprotein YP_003183487.1 PFAM: isochorismatase hydrolase; KEGG: bav:BAV0718 isochorismatase-family hydrolase YP_003183488.1 PFAM: beta-lactamase domain protein; KEGG: bbt:BBta_2483 putative beta-lactamase YP_003183489.1 PFAM: thioesterase superfamily protein; KEGG: sfr:Sfri_3970 thioesterase superfamily protein YP_003183492.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: avn:Avin_21300 ABC transporter, ATP binding component YP_003183493.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7115 ABC transporter, permease protein YP_003183494.1 PFAM: extracellular solute-binding protein family 1; KEGG: mxa:MXAN_7114 ABC transporter, periplasmic substrate-binding protein YP_003183495.1 PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter YP_003183496.1 KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003183497.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dds:Ddes_0567 two component transcriptional regulator, winged helix family YP_003183498.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU1101 sensory box histidine kinase YP_003183500.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rfe:RF_0832 lysine efflux permease YP_003183501.1 KEGG: esa:ESA_01942 hypothetical protein YP_003183502.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: aha:AHA_0114 ribose operon repressor YP_003183503.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: kpe:KPK_4466 glycerol-3-phosphate responsive antiterminator YP_003183504.1 PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_2314 drug resistance transporter, EmrB/QacA subfamily YP_003183505.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bpy:Bphyt_1823 transcriptional regulator, MerR family YP_003183506.1 PFAM: phosphate transporter; KEGG: dar:Daro_0679 phosphate transporter YP_003183507.1 PFAM: Putitive phosphate transport regulator; KEGG: dar:Daro_0678 phosphate transport regulator- like protein YP_003183508.1 TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: hha:Hhal_0078 glycerol kinase YP_003183509.1 PFAM: FAD dependent oxidoreductase; KEGG: mxa:MXAN_7329 glycerol-3-phosphate dehydrogenase YP_003183510.1 PFAM: Peptidase S53 propeptide; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: cvi:CV_3519 periplasmic aspartyl protease YP_003183511.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sde:Sde_1768 GntR family transcriptional regulator YP_003183512.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: sde:Sde_1283 2-deoxy-D-gluconate 3- dehydrogenase YP_003183513.1 PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; KEGG: hypothetical protein ; K01235 alpha- glucuronidase YP_003183514.1 KEGG: pna:Pnap_4852 hypothetical protein YP_003183515.1 PFAM: Na+/solute symporter; KEGG: bcm:Bcenmc03_2360 Na+/solute symporter YP_003183516.1 KEGG: bvi:Bcep1808_2428 hypothetical protein YP_003183517.1 KEGG: dma:DMR_19620 sensor protein ZraS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003183518.1 TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A3051 glycosyl transferase, group 2 family protein YP_003183519.1 KEGG: pfs:PFLU5993 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region YP_003183520.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: afw:Anae109_0620 integral membrane sensor signal transduction histidine kinase YP_003183521.1 PFAM: transglutaminase domain protein; Protein of unknown function DUF553; SMART: transglutaminase domain protein; KEGG: hypothetical protein YP_003183522.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pae:PA5031 putative short chain dehydrogenase YP_003183523.1 PFAM: thymidine kinase; KEGG: sei:SPC_1979 thymidine kinase YP_003183524.1 KEGG: aav:Aave_1600 hypothetical protein YP_003183525.1 PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sat:SYN_02917 FAD-dependent dehydrogenase YP_003183526.1 PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: afr:AFE_1028 hypothetical protein YP_003183527.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rle:pRL120015 putative glycerophosphoryl diester phosphodiesterase YP_003183528.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpu:KP1_0565 putative sn-glycerol-3-phosphate- binding periplasmic protein YP_003183529.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0175 binding-protein dependent transport system inner membrane protein YP_003183530.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein YP_003183531.1 PFAM: peptidase M29 aminopeptidase II; KEGG: bhe:BH02500 aminopeptidase YP_003183532.1 PFAM: gamma-glutamyltranspeptidase; KEGG: csa:Csal_1740 gamma-glutamyltransferase YP_003183533.1 KEGG: vap:Vapar_4364 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I YP_003183534.1 PFAM: regulatory protein TetR; KEGG: dal:Dalk_1395 transcriptional regulator, TetR family YP_003183535.1 TIGRFAM: YhgE/Pip C-terminal domain protein; YhgE/Pip N-terminal domain protein; KEGG: SRP ; K01421 putative membrane protein YP_003183536.1 KEGG: aeh:Mlg_1110 hypothetical protein YP_003183537.1 PFAM: Phosphoglycerate mutase; KEGG: pca:Pcar_2741 phosphoglycerate mutase/fructose-2,6-bisphosphatase YP_003183538.1 PFAM: phosphoglucose isomerase (PGI); KEGG: dds:Ddes_0851 glucose-6-phosphate isomerase YP_003183539.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase YP_003183540.1 PFAM: protein of unknown function UPF0180 YP_003183544.1 PFAM: MMPL domain protein; KEGG: hypothetical protein YP_003183545.1 PFAM: regulatory protein TetR; KEGG: dac:Daci_0033 TetR family transcriptional regulator YP_003183547.1 PFAM: Acireductone dioxygenase ARD; Cupin 2 conserved barrel domain protein; KEGG: dda:Dd703_0920 acireductone dioxygenase ARD YP_003183548.1 KEGG: scl:sce4410 hypothetical protein YP_003183549.1 converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage YP_003183550.1 TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase; KEGG: acp:A2cp1_0690 HAD-superfamily hydrolase, subfamily IB (PSPase-like) YP_003183551.1 TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; KEGG: smt:Smal_1782 methylthioribulose-1-phosphate dehydratase YP_003183554.1 KEGG: scl:sce4939 hypothetical protein; TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003183555.1 PFAM: Late competence development protein ComFB YP_003183556.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mxa:MXAN_1937 cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein YP_003183557.1 PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: geo:Geob_1719 signal transduction histidine kinase, nitrogen specific, NtrB YP_003183558.1 KEGG: bch:Bcen2424_2014 phosphatidate cytidylyltransferase YP_003183559.1 KEGG: gme:Gmet_3422 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003183560.1 PFAM: conserved hypothetical protein; KEGG: dol:Dole_0541 hypothetical protein YP_003183561.1 KEGG: ade:Adeh_3635 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein YP_003183562.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: gsu:GSU2794 large-conductance mechanosensitive channel YP_003183563.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mpt:Mpe_B0537 GntR family transcriptional regulator YP_003183564.1 PFAM: extracellular solute-binding protein family 5; KEGG: ara:Arad_8663 dipeptide ABC transporter YP_003183565.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: pen:PSEEN2864 IS256 family transposase YP_003183566.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_0754 binding-protein-dependent transport systems inner membrane component YP_003183567.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_2624 binding-protein-dependent transport systems inner membrane component YP_003183569.1 TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA YP_003183570.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: abo:ABO_0457 MviN family membrane protein YP_003183571.1 PFAM: Sigma-G inhibitor, Gin YP_003183573.1 PFAM: Orn/Lys/Arg decarboxylase major region; KEGG: Os03g0848100; hypothetical protein YP_003183574.1 KEGG: ppg:PputGB1_1495 dTMP kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase YP_003183575.1 PFAM: protein of unknown function DUF970 YP_003183576.1 KEGG: saz:Sama_2042 DNA-directed DNA polymerase YP_003183577.1 PFAM: PSP1 domain protein; KEGG: signal peptidase-like protein YP_003183578.1 PFAM: protein of unknown function DUF972 YP_003183579.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mxa:MXAN_3552 tetrapyrrole methylase family protein YP_003183580.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003183581.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; KEGG: gsu:GSU2232 methionyl-tRNA synthetase YP_003183582.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: rhi:NGR_c16030 deoxyribonuclease YP_003183583.1 TIGRFAM: primase/topoisomerase like protein; KEGG: predicted protein YP_003183584.1 KEGG: gme:Gmet_1304 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase YP_003183585.1 KEGG: aby:ABAYE2729 hypothetical protein YP_003183586.1 PFAM: ribonucleotide reductase; KEGG: aav:Aave_0863 ribonucleotide-diphosphate reductase subunit beta YP_003183587.1 PFAM: PGAP1 family protein; KEGG: dvm:DvMF_0506 PGAP1 family protein YP_003183588.1 KEGG: Hypothetical protein CBG02561 YP_003183589.1 KEGG: bgl:bglu_1g07110 PE-PGRS family protein YP_003183592.1 PFAM: regulatory protein LuxR; GAF domain protein; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; KEGG: pag:PLES_40161 putative two-component response regulator YP_003183593.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: sat:SYN_00517 NAD-dependent malic enzyme YP_003183594.1 PFAM: Sterol-binding domain protein; KEGG: ppw:PputW619_3213 sterol-binding domain- containing protein YP_003183595.1 PFAM: AMP-dependent synthetase and ligase; KEGG: vpa:VP1964 putative long-chain-fatty-acid-CoA ligase YP_003183596.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: hypothetical protein; K00249 acyl-CoA dehydrogenase YP_003183597.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: vei:Veis_1134 acyl-CoA dehydrogenase domain- containing protein YP_003183598.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dol:Dole_2365 enoyl-CoA hydratase/isomerase YP_003183599.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dol:Dole_1608 short-chain dehydrogenase/reductase SDR YP_003183600.1 KEGG: dac:Daci_0695 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003183601.1 KEGG: bmj:BMULJ_03470 highly repetitive protein YP_003183602.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: hch:HCH_00090 sortase (surface protein transpeptidase) YP_003183603.1 PFAM: ABC-1 domain protein; KEGG: gsu:GSU1088 ubiquinone biosynthesis protein AarF, putative YP_003183605.1 PFAM: Aldehyde Dehydrogenase; KEGG: dal:Dalk_3586 aldehyde dehydrogenase YP_003183606.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dol:Dole_2290 iron-containing alcohol dehydrogenase YP_003183607.1 KEGG: similar to circumsporozoite YP_003183608.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: aci:ACIAD1693 acyl-CoA dehydrogenase YP_003183609.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB0613 putative short chain dehydrogenase YP_003183610.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpi:Rpic_1443 short-chain dehydrogenase/reductase SDR YP_003183611.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: pfo:Pfl01_3651 acyl-CoA dehydrogenase-like YP_003183612.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_6374 medium-chain fatty acid--CoA ligase YP_003183613.1 PFAM: MaoC domain protein dehydratase; KEGG: mxa:MXAN_4673 MaoC domain-containing protein YP_003183614.1 PFAM: MaoC domain protein dehydratase; KEGG: mxa:MXAN_4672 MaoC domain-containing protein YP_003183615.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bxe:Bxe_C0866 IclR family transcriptional regulator YP_003183616.1 PFAM: aminoglycoside phosphotransferase; KEGG: dat:HRM2_03030 putative aminoglycoside phosphotransferase YP_003183617.1 PFAM: metallophosphoesterase; KEGG: sat:SYN_00526 calcineurin-like phosphoesterase YP_003183618.1 PFAM: protein of unknown function DUF458 YP_003183620.1 TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG YP_003183621.1 PFAM: Integrase catalytic region; KEGG: dde:Dde_3592 putative transposase protein YP_003183622.1 PFAM: protein of unknown function DUF1021 YP_003183624.1 KEGG: rlg:Rleg_5801 cyanophycinase; TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E YP_003183625.1 TIGRFAM: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; RimK domain protein ATP-grasp; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP- grasp; KEGG: csa:Csal_1114 cyanophycin synthetase YP_003183626.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: glo:Glov_2596 4-diphosphocytidyl-2C-methyl-D- erythritol kinase YP_003183627.1 TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; KEGG: xanthine phosphoribosyltransferase YP_003183628.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: nam:NAMH_1404 putative endoribonuclease L-PSP YP_003183629.1 PFAM: SpoVG family protein; KEGG: ank:AnaeK_0129 SpoVG family protein YP_003183630.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; 4-diphosphocytidyl- 2C-methyl-D-erythritol synthase; acylneuraminate cytidylyltransferase; KEGG: gme:Gmet_0103 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N- acetyltransferase YP_003183631.1 KEGG: sun:SUN_1045 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003183632.1 KEGG: gbm:Gbem_2766 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003183634.1 KEGG: gur:Gura_0140 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003183635.1 TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003183637.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gme:Gmet_2399 nucleoside triphosphate pyrophosphohydrolase YP_003183638.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: DNA-binding protein HU YP_003183639.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: afr:AFE_0164 S4 domain protein YP_003183640.1 PFAM: YabP family protein YP_003183641.1 PFAM: Spore cortex biosynthesis protein, YabQ-like YP_003183642.1 PFAM: Septum formation initiator YP_003183643.1 PFAM: RNA binding S1 domain protein; KEGG: S1 RNA binding domain containing protein YP_003183646.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ank:AnaeK_2313 CMP/dCMP deaminase zinc- binding YP_003183647.1 KEGG: hypothetical protein; TIGRFAM: stage II sporulation protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_003183649.1 SMART: serine/threonine protein kinase; KEGG: scl:sce7114 protein kinase YP_003183650.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: pca:Pcar_0996 cell cycle protein YP_003183651.1 KEGG: scl:sce8180 hypoxanthine- phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003183652.1 KEGG: pca:Pcar_0997 ATP-dependent zinc protease/cell division protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003183655.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: psa:PST_0152 hypothetical protein YP_003183656.1 PFAM: Hsp33 protein; KEGG: geo:Geob_0020 HSP33 protein YP_003183657.1 KEGG: afw:Anae109_2337 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003183658.1 KEGG: lhk:LHK_01397 7,8-dihydro-6- hydroxymethylpterin-pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK YP_003183659.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dma:DMR_10290 Xre family DNA-binding protein YP_003183660.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: transcription elongation factor YP_003183661.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type; KEGG: gsu:GSU2271 lysyl-tRNA synthetase YP_003183663.1 PFAM: DinB family protein YP_003183664.1 PFAM: Bacitracin resistance protein BacA; KEGG: cvi:CV_1929 undecaprenyl pyrophosphate phosphatase YP_003183665.1 PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0412 putative fosmidomycin resistance antibiotic resistance transmembrane protein YP_003183666.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gbm:Gbem_0023 protein of unknown function DUF6 transmembrane YP_003183667.1 PFAM: VanZ family protein YP_003183668.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_1520 short chain dehydrogenase/reductase family oxidoreductase YP_003183669.1 PFAM: aminotransferase class I and II; KEGG: tgr:Tgr7_1438 aminotransferase class I and II YP_003183670.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: ara:Arad_3802 phosphoribosylglycinamide formyltransferase YP_003183671.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: hypothetical protein YP_003183672.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; phosphotransferase system EIIC; KEGG: ypb:YPTS_4138 PTS system, mannitol-specific IIC subunit YP_003183673.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; KEGG: ecm:EcSMS35_3997 putative PTS regulatory protein YP_003183674.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ent:Ent638_0136 PTS system, mannitol-specific IIC subunit YP_003183675.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: aha:AHA_0550 mannitol-1-phosphate 5- dehydrogenase YP_003183676.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: tbd:Tbd_2413 HPrNtr YP_003183677.1 KEGG: pmr:PMI1829 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003183678.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: tgr:Tgr7_2634 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003183679.1 PFAM: Anti-sigma-K factor RskA; KEGG: glo:Glov_1269 hypothetical protein YP_003183680.1 PFAM: Amidase; KEGG: dol:Dole_2535 amidase YP_003183682.1 KEGG: ppg:PputGB1_4140 hypothetical protein YP_003183683.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bac:BamMC406_4138 ABC transporter related YP_003183684.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4255 ABC transporter related YP_003183685.1 PFAM: BioY protein; KEGG: sat:SYN_00210 hypothetical protein YP_003183686.1 KEGG: nmu:Nmul_A0630 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003183687.1 PFAM: major facilitator superfamily MFS_1; KEGG: dat:HRM2_41620 permease of the major facilitator superfamily YP_003183688.1 KEGG: geo:Geob_1087 hypothetical protein YP_003183689.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: afw:Anae109_3258 rhodanese domain-containing protein YP_003183690.1 KEGG: cco:CCC13826_1906 flagellar biosynthetic protein FliQ YP_003183691.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_003183692.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: rpf:Rpic12D_1770 peptidase S15 YP_003183693.1 PFAM: Camphor resistance CrcB protein; KEGG: lhk:LHK_01039 CcrB YP_003183694.1 PFAM: Camphor resistance CrcB protein; KEGG: rle:RL2568 CrcB family protein YP_003183696.1 PFAM: GtrA family protein; KEGG: pca:Pcar_1743 hypothetical protein YP_003183697.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: dda:Dd703_2912 methionine synthase vitamin- B12 independent YP_003183698.1 PFAM: Peptidase S53 propeptide; KEGG: bpm:BURPS1710b_A0608 kumamolisin YP_003183700.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: kpu:KP1_1666 transcriptional effector for high-affinity potassium transport system YP_003183701.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mca:MCA2214 sensor histidine kinase KdpD YP_003183702.1 KEGG: rec:RHECIAT_PA0000211 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit YP_003183703.1 TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: cju:C8J_0629 potassium-transporting ATPase subunit B YP_003183704.1 PFAM: K transporting ATPase KdpC subunit; KEGG: afr:AFE_2473 K+-transporting ATPase, C subunit YP_003183705.1 PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: bja:bll6776 two-component hybrid sensor and regulator YP_003183706.1 PFAM: polysaccharide deacetylase; KEGG: wol:WD0720 polysaccharide deacetylase, putative YP_003183707.1 PFAM: aldo/keto reductase; KEGG: mxa:MXAN_0303 aldo/keto reductase family oxidoreductase YP_003183708.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_0087 major facilitator family transporter YP_003183709.1 PFAM: glycoside hydrolase family 18; Peptidoglycan- binding lysin domain; SMART: chitinase II; Peptidoglycan-binding LysM; KEGG: xcc:XCC2889 hypothetical protein YP_003183710.1 KEGG: scl:sce6008 xylose binding protein transport system YP_003183711.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter YP_003183712.1 PFAM: inner-membrane translocator; KEGG: oan:Oant_2814 inner-membrane translocator YP_003183714.1 KEGG: afr:AFE_2041 hypothetical protein YP_003183715.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: hhe:HH1137 2-isopropylmalate synthase YP_003183716.1 PFAM: glutathione peroxidase; KEGG: aci:ACIAD2085 glutathione peroxidase YP_003183717.1 KEGG: ade:Adeh_2026 hypothetical protein YP_003183719.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: bgl:bglu_2g15040 hypothetical protein YP_003183720.1 KEGG: bps:BPSS1439 membrane-anchored cell surface protein YP_003183722.1 PFAM: O-antigen polymerase; KEGG: bur:Bcep18194_A5972 O-antigen polymerase YP_003183723.1 KEGG: mxa:MXAN_2922 sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003183724.1 PFAM: glycosyl transferase group 1; KEGG: rlg:Rleg_0456 glycosyl transferase group 1 YP_003183725.1 PFAM: glycosyl transferase group 1; KEGG: mes:Meso_2594 glycosyl transferase, group 1 YP_003183726.1 PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_4623 O-antigen ABC exporter, permease protein YP_003183727.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpy:Bphyt_4318 ABC transporter related YP_003183728.1 PFAM: glycosyl transferase group 1; KEGG: noc:Noc_0732 glycosyl transferase, group 1 YP_003183729.1 PFAM: transposase IS4 family protein; KEGG: aeh:Mlg_1129 transposase, IS4 family protein YP_003183730.1 KEGG: SPAPB18E9.06c; sequence orphan YP_003183731.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: ade:Adeh_0434 exodeoxyribonuclease I subunit D YP_003183732.1 PFAM: SMC domain protein; KEGG: ade:Adeh_0433 exonuclease SbcC YP_003183733.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: nmu:Nmul_A2276 heavy metal translocating P- type ATPase YP_003183734.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sfu:Sfum_0108 AMP-dependent synthetase and ligase YP_003183736.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mpt:Mpe_A0161 sigma-70 region 2 YP_003183738.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ade:Adeh_0361 molybdopterin-binding oxidoreductase YP_003183739.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: swd:Swoo_0522 sec-independent protein translocase, TatC subunit YP_003183740.1 PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bba:Bd2572 twin-arginine-dependent translocase protein YP_003183741.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: avn:Avin_13200 UDP-N-acetylmuramyl-tripeptide synthetase YP_003183742.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: dar:Daro_0113 peptidoglycan glycosyltransferase YP_003183744.1 KEGG: ypg:YpAngola_A1732 hypothetical protein YP_003183745.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: TMTC4; transmembrane and tetratricopeptide repeat containing 4 YP_003183746.1 KEGG: sfu:Sfum_0368 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_003183747.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: sfu:Sfum_1218 homoserine dehydrogenase YP_003183748.1 KEGG: similar to hyphally regulated cell wall protein HYR1p; similar to S. pombe hypothetical serine-rich secreted protein; similar to S. cerevisiae MUC1 (YIR019C) YP_003183749.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: maq:Maqu_0756 type II secretion system protein E YP_003183750.1 PFAM: Type II secretion system F domain; KEGG: dat:HRM2_11250 GspF1 YP_003183751.1 KEGG: tgr:Tgr7_3224 type IV pilin YP_003183754.1 KEGG: bch:Bcen2424_5983 YadA domain-containing protein YP_003183755.1 KEGG: scl:sce6188 Tfp pilus assembly protein, ATPase PilM YP_003183756.1 PFAM: Fimbrial assembly family protein YP_003183758.1 KEGG: gur:Gura_4274 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_003183759.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: pca:Pcar_2139 prepilin peptidase YP_003183760.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dol:Dole_1953 DEAD/DEAH box helicase domain- containing protein YP_003183761.1 KEGG: nmu:Nmul_A0278 glycosyl transferase family protein YP_003183762.1 KEGG: pap:PSPA7_4182 putative transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; PAS domain containing protein YP_003183763.1 KEGG: rme:Rmet_1618 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_003183764.1 PFAM: Aldehyde Dehydrogenase; KEGG: pca:Pcar_1496 NAD-dependent aldehyde dehydrogenases YP_003183765.1 KEGG: bpm:BURPS1710b_2229 Hep_Hag family protein YP_003183766.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: sat:SYN_00833 transglutaminase-like superfamily protein YP_003183767.1 PFAM: glycosidase PH1107-related; KEGG: ypb:YPTS_2609 glycosidase PH1107-related YP_003183769.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: hypothetical protein YP_003183770.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: dat:HRM2_23580 RocD1 YP_003183771.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: geo:Geob_2608 delta-1-pyrroline-5-carboxylate dehydrogenase YP_003183772.1 KEGG: dat:HRM2_07500 RocR; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; PAS fold-4 domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; PAS domain containing protein YP_003183773.1 PFAM: amino acid permease-associated region; KEGG: pfl:PFL_2710 amino acid transporter YP_003183774.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: tbd:Tbd_0732 RNA polymease sigma-54 factor protein YP_003183777.1 KEGG: MCA1; maturation/stability factor for petA mRNA YP_003183778.1 PFAM: Peptidoglycan-binding domain 1 protein; Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: ookinete protein YP_003183779.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B2339 short chain dehydrogenase YP_003183780.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: mmw:Mmwyl1_0214 glycoside hydrolase family 3 protein YP_003183782.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: scl:sce8995 hypothetical protein YP_003183783.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: mms:mma_2316 major facilitator transporter YP_003183784.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gsu:GSU3370 GntR family transcriptional regulator YP_003183785.1 KEGG: rpi:Rpic_1959 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003183786.1 KEGG: rpd:RPD_3591 5-carboxymethyl-2- hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003183787.1 KEGG: hypothetical protein; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase YP_003183788.1 TIGRFAM: 3,4-dihydroxyphenylacetate 2,3- dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpa:RPA3761 putative catechol 2,3-dioxygenase YP_003183789.1 KEGG: ppd:Ppro_3063 dihydrodipicolinate synthase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003183790.1 PFAM: Catalase related subgroup; KEGG: bba:Bd0798 hypothetical protein YP_003183791.1 PFAM: MMPL domain protein; KEGG: bpr:GBP346_A2154 Hep_Hag family protein YP_003183792.1 PFAM: protein of unknown function DUF1453 YP_003183793.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: eic:NT01EI_2820 D-alanyl-D-alanine endopeptidase YP_003183794.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; Fibronectin type III domain protein; KEGG: sat:SYN_00304 multimodular transpeptidase- transglycosylase YP_003183795.1 PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II; KEGG: cbs:COXBURSA331_A0790 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_003183796.1 KEGG: dol:Dole_2645 thioredoxin YP_003183798.1 PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein YP_003183799.1 KEGG: dal:Dalk_1894 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003183801.1 PFAM: membrane protein of unknown function; KEGG: lch:Lcho_0493 membrane protein of unknown function YP_003183802.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: scl:sce0320 holo-acyl-carrier-protein- synthase YP_003183803.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: afw:Anae109_2331 carbohydrate kinase, YjeF related protein YP_003183805.1 KEGG: dds:Ddes_0171 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_003183807.1 PFAM: PemK family protein; KEGG: noc:Noc_1568 PemK-like protein YP_003183808.1 KEGG: sfu:Sfum_0366 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; Acetohydroxy acid isomeroreductase catalytic domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; S-adenosyl-L-homocysteine hydrolase YP_003183809.1 PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: dat:HRM2_21580 putative anthranilate synthase component II YP_003183810.1 PFAM: metal-dependent phosphohydrolase HD sub domain; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; histidine kinase HAMP region domain protein; KEGG: gme:Gmet_0018 metal dependent phosphohydrolase YP_003183811.1 PFAM: protein of unknown function DUF1659; KEGG: similar to CG5529-PA YP_003183813.1 PFAM: protein of unknown function DUF1450 YP_003183814.1 PFAM: SNARE associated Golgi protein; KEGG: ank:AnaeK_1303 SNARE associated Golgi protein YP_003183816.1 KEGG: dal:Dalk_0686 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003183817.1 PFAM: protein of unknown function UPF0079; KEGG: gbm:Gbem_1263 protein of unknown function UPF0079 YP_003183818.1 PFAM: peptidase M22 glycoprotease; KEGG: spl:Spea_2453 peptidase M22 glycoprotease YP_003183819.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_2152 ribosomal-protein-alanine acetyltransferase YP_003183820.1 KEGG: glo:Glov_2314 metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_003183821.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_1953 putative ABC transporter ATP- binding protein YP_003183822.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pla:Plav_2782 phosphoesterase PA-phosphatase related YP_003183823.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ank:AnaeK_1102 5-formyltetrahydrofolate cyclo- ligase YP_003183824.1 KEGG: hha:Hhal_0241 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003183825.1 PFAM: molybdopterin binding domain; KEGG: dvl:Dvul_1573 molybdopterin binding domain- containing protein YP_003183826.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: tbd:Tbd_1024 molybdopterin-guanine dinucleotide biosynthesis MobB YP_003183827.1 PFAM: chaperonin Cpn10; KEGG: reu:Reut_A2657 co-chaperonin GroES YP_003183828.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mxa:MXAN_4895 chaperonin GroEL YP_003183829.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: Sqrdl; sulfide quinone reductase-like (yeast) YP_003183830.1 KEGG: hypothetical protein YP_003183831.1 PFAM: beta-lactamase domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gsu:GSU2309 metallo-beta-lactamase family protein YP_003183832.1 KEGG: dar:Daro_1399 PAS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_003183833.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ade:Adeh_1997 two component LuxR family transcriptional regulator YP_003183835.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: scl:sce8273 putative methanol dehydrogenase regulatory protein YP_003183836.1 PFAM: protein of unknown function DUF58; KEGG: scl:sce8272 hypothetical protein YP_003183837.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: xca:xccb100_3354 putative transglutaminase- like superfamily protein YP_003183838.1 PFAM: beta-lactamase domain protein; KEGG: afw:Anae109_0051 beta-lactamase domain- containing protein YP_003183840.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; KEGG: glo:Glov_1901 GMP synthase YP_003183841.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: gur:Gura_2064 adenylosuccinate lyase YP_003183842.1 KEGG: pla:Plav_2589 phosphoribosylaminoimidazole- succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003183843.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: pla:Plav_2588 phosphoribosylformylglycinamidine synthase, PurS YP_003183844.1 KEGG: bja:bll5723 phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003183845.1 KEGG: acp:A2cp1_4369 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003183846.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: afe:Lferr_1722 amidophosphoribosyltransferase YP_003183847.1 KEGG: pla:Plav_3331 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003183848.1 KEGG: eba:ebA1153 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region YP_003183849.1 KEGG: phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201 YP_003183850.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bam:Bamb_2367 hypothetical protein YP_003183851.1 PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce7548 ABC-type dipeptide transport system, periplasmic component YP_003183852.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dda:Dd703_3234 mandelate racemase/muconate lactonizing protein YP_003183853.1 KEGG: ade:Adeh_0666 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase YP_003183854.1 PFAM: protein of unknown function DUF214; KEGG: pfs:PFLU5778 putative cell division-related membrane protein YP_003183856.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: gur:Gura_4079 MotA/TolQ/ExbB proton channel YP_003183857.1 PFAM: OmpA/MotB domain protein; KEGG: cvi:CV_1814 flagellar motor protein MotD YP_003183858.1 KEGG: pca:Pcar_0099 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003183859.1 KEGG: pca:Pcar_0087 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003183860.1 TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein; KEGG: gme:Gmet_1285 HPr kinase/phosphorylase YP_003183861.1 KEGG: mxa:MXAN_3289 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_003183862.1 PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: dal:Dalk_5269 TPR repeat-containing protein YP_003183863.1 PFAM: NUDIX hydrolase; KEGG: dma:DMR_p1_00280 hypothetical protein YP_003183864.1 PFAM: conserved hypothetical protein; KEGG: afw:Anae109_0152 hypothetical protein YP_003183865.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: mxa:MXAN_3230 hypothetical protein YP_003183866.1 PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like YP_003183867.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: mfa:Mfla_0147 HPrNtr YP_003183871.1 KEGG: scl:sce3935 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003183872.1 PFAM: protein of unknown function UPF0005; KEGG: saz:Sama_1782 hypothetical protein YP_003183873.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: rlg:Rleg_2339 leucyl-tRNA synthetase YP_003183874.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: vap:Vapar_5148 GntR domain protein YP_003183877.1 TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: atc:AGR_C_2113 hypothetical protein YP_003183878.1 PFAM: protein of unknown function DUF402 YP_003183879.1 TIGRFAM: transcription factor, RsfA family; KEGG: hypothetical protein YP_003183880.1 PFAM: DEAD/DEAH box helicase domain protein; Protein of unknown function DUF1998; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: sat:SYN_00383 DEAD/deah box helicase YP_003183881.1 KEGG: sat:SYN_00384 hypothetical protein YP_003183882.1 PFAM: protein of unknown function DUF1054 YP_003183883.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sat:SYN_02264 UDP-sugar diphosphatase / 5'- nucleotidase YP_003183884.1 KEGG: sfu:Sfum_1062 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003183886.1 PFAM: GerA spore germination protein; KEGG: hypothetical protein YP_003183887.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: hypothetical protein YP_003183889.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pca:Pcar_2506 alcohol dehydrogenase, class IV YP_003183890.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: afw:Anae109_1665 methylmalonate-semialdehyde dehydrogenase YP_003183891.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bxe:Bxe_B0285 major facilitator superfamily sugar transporter YP_003183892.1 KEGG: dat:HRM2_27380 sigma-54 dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; magnesium chelatase ChlI subunit; SMART: AAA ATPase; PAS domain containing protein YP_003183893.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rhi:NGR_c26750 acetyl-CoA synthetase YP_003183894.1 PFAM: ribonuclease H; KEGG: dvm:DvMF_2669 ribonuclease H YP_003183895.1 PFAM: domain of unknown function DUF1730; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein; KEGG: pla:Plav_0200 hypothetical protein YP_003183896.1 KEGG: tau:Tola_1091 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding YP_003183897.1 PFAM: aminoglycoside phosphotransferase YP_003183898.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: pca:Pcar_0575 isocitrate/isopropylmalate dehydrogenase YP_003183899.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpd:BURPS668_A0497 IclR family transcriptional regulator YP_003183901.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gsu:GSU1197 RNA methyltransferase YP_003183902.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: bba:Bd0778 dihydrolipoamide dehydrogenase, E3 subunit YP_003183903.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: bba:Bd0779 pyruvate dehydrogenase E2 YP_003183904.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gbm:Gbem_0460 transketolase central region YP_003183905.1 KEGG: gme:Gmet_2509 dehydrogenase, E1 component; TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003183906.1 PFAM: putative esterase; KEGG: pag:PLES_28431 hypothetical protein YP_003183907.1 PFAM: Carboxylesterase type B; KEGG: rlt:Rleg2_6351 carboxylesterase type B YP_003183908.1 PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: ank:AnaeK_2635 putative serine protein kinase, PrkA YP_003183909.1 TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; KEGG: noc:Noc_2508 hypothetical protein YP_003183910.1 PFAM: Resolvase domain; Recombinase; KEGG: mxa:MXAN_1887 resolvase family site-specific recombinase YP_003183911.1 PFAM: protein of unknown function DUF955 YP_003183912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu3715 hypothetical protein YP_003183913.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003183915.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ypy:YPK_1628 XRE family transcriptional regulator YP_003183916.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gme:Gmet_0901 XRE family transcriptional regulator YP_003183918.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rpa:RPA4129 XRE family transcriptional regulator YP_003183919.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: vcj:VCD_000757 cryptic phage CTXphi transcriptional repressor RstR YP_003183923.1 KEGG: dde:Dde_0902 hypothetical protein YP_003183926.1 KEGG: dal:Dalk_2612 hypothetical protein YP_003183927.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: scl:sce8964 hypothetical protein YP_003183929.1 KEGG: aav:Aave_1600 hypothetical protein YP_003183931.1 KEGG: mxa:MXAN_0236 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003183938.1 KEGG: sfu:Sfum_3787 hypothetical protein YP_003183942.1 PFAM: endodeoxyribonuclease RusA YP_003183945.1 KEGG: yen:YE1790 exodeoxyribonuclease X; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_003183946.1 PFAM: Integrase catalytic region; KEGG: dde:Dde_3592 putative transposase protein YP_003183948.1 PFAM: Sigma-70 region 4 type 2; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: afw:Anae109_2743 two component LuxR family transcriptional regulator YP_003183950.1 PFAM: transposase IS4 family protein; KEGG: rpt:Rpal_4989 transposase IS4 family protein YP_003183951.1 PFAM: HesB/YadR/YfhF-family protein YP_003183952.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein YP_003183953.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: son:SO_0708 transposase mutator family protein YP_003183954.1 KEGG: spc:Sputcn32_3788 cytochrome oxidase assembly YP_003183955.1 PFAM: cytochrome c oxidase subunit II; KEGG: vsa:VSAL_II0163 cytochrome o ubiquinol oxidase subunit II (ubiquinol oxidase subunit 2 precursor) YP_003183956.1 PFAM: cytochrome c oxidase subunit I; KEGG: ftn:FTN_0196 cytochrome bo terminal oxidase subunit I YP_003183957.1 PFAM: cytochrome c oxidase subunit III; KEGG: smd:Smed_4370 cytochrome o ubiquinol oxidase subunit III YP_003183958.1 PFAM: cytochrome C oxidase subunit IV; KEGG: bra:BRADO2398 cytochrome o ubiquinol oxidase protein subunit IV YP_003183959.1 KEGG: dar:Daro_4142 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003183960.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: dar:Daro_0834 LuxR response regulator receiver YP_003183961.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_0268 transposase IS4 family protein YP_003183962.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: dvl:Dvul_2352 L-lactate dehydrogenase YP_003183963.1 PFAM: transposase IS4 family protein; KEGG: dat:HRM2_33940 transposase family protein YP_003183964.1 KEGG: gur:Gura_0144 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase YP_003183965.1 PFAM: transposase IS4 family protein; KEGG: rpd:RPD_1226 transposase, IS4 YP_003183967.1 KEGG: abu:Abu_0994 response regulator receiver; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; metal- dependent phosphohydrolase HD sub domain; PAS fold domain protein; SMART: GGDEF domain containing protein; metal- dependent phosphohydrolase HD region YP_003183968.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: pfl:PFL_2328 methyl-accepting chemotaxis transducer YP_003183969.1 PFAM: UspA domain protein; KEGG: bmj:BMULJ_05626 putative universal stress protein YP_003183970.1 KEGG: vap:Vapar_1324 hypothetical protein YP_003183972.1 KEGG: tgr:Tgr7_2230 TonB family protein YP_003183973.1 PFAM: protein of unknown function DUF88; KEGG: tbd:Tbd_1940 hypothetical protein YP_003183974.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: sfu:Sfum_0264 transcriptional regulator, ArsR family YP_003183975.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: scl:sce5616 lactoylglutathione lyase YP_003183976.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: pmr:PMI2152 arsenical pump membrane protein YP_003183977.1 KEGG: hha:Hhal_0091 protein tyrosine phosphatase; TIGRFAM: arsenate reductase (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003183978.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_pKPN3p05928 N-acetyltransferase-like protein YP_003183979.1 KEGG: ppr:PBPRA0283 putative DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_003183981.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: noc:Noc_1199 transposase IS605 YP_003183984.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: tbd:Tbd_2095 RNA polymerase sigma factor RpoE YP_003183986.1 PFAM: AIG2 family protein; KEGG: pmr:PMI3392 hypothetical protein YP_003183987.1 PFAM: Sigma-70 region 4 type 2; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: hypothetical protein YP_003183989.1 KEGG: ade:Adeh_1121 peptidase M50, putative membrane-associated zinc metallopeptidase YP_003183993.1 KEGG: hypothetical protein LOC100147971 YP_003183997.1 PFAM: Pyrrolo-quinoline quinone; KEGG: ACAN; aggrecan ; K06792 aggrecan 1 YP_003183998.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: avi:Avi_3606 regulators of stationary/sporulation gene expression protein YP_003183999.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_3493 PilT domain-containing protein YP_003184001.1 PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: noc:Noc_3082 ParB-like partition protein YP_003184006.1 PFAM: BRO domain protein; KEGG: abm:ABSDF1019 putative prophage antirepressor YP_003184009.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: cvi:CV_2461 hypothetical protein YP_003184012.1 KEGG: ajs:Ajs_4178 hypothetical protein YP_003184013.1 KEGG: proteophosphoglycan 5 YP_003184014.1 KEGG: spen; split ends YP_003184015.1 KEGG: lch:Lcho_0698 cobyrinic acid ac-diamide synthase YP_003184016.1 PFAM: SAF domain protein; KEGG: acp:A2cp1_3006 Flp pilus assembly protein CpaB YP_003184017.1 PFAM: type II secretion system protein E; KEGG: bba:Bd0111 Flp pilus assembly protein TadA YP_003184018.1 KEGG: rpf:Rpic12D_0544 type II secretion system protein YP_003184026.1 KEGG: dal:Dalk_4977 hypothetical protein YP_003184027.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: bvi:Bcep1808_3059 diguanylate cyclase/phosphodiesterase YP_003184032.1 KEGG: afw:Anae109_3967 Flp pilus assembly protein ATPase CpaE-like protein YP_003184033.1 PFAM: SAF domain protein; KEGG: hypothetical protein YP_003184034.1 PFAM: type II secretion system protein E; KEGG: smt:Smal_2323 type II secretion system protein E YP_003184035.1 KEGG: pst:PSPTO_4854 hypothetical protein YP_003184038.1 PFAM: SpoVT/AbrB domain protein; KEGG: dal:Dalk_1529 SpoVT/AbrB domain protein YP_003184039.1 PFAM: PilT protein domain protein; KEGG: eba:ebB17 hypothetical protein YP_003184041.1 PFAM: peptidase A24A prepilin type IV; KEGG: afr:AFE_0186 type IV pilus prepilin peptidase PilD YP_003184043.1 KEGG: hypothetical protein YP_003184045.1 KEGG: pqn-57; Prion-like-(Q/N-rich)-domain-bearing protein YP_003184048.1 PFAM: Lytic transglycosylase catalytic; KEGG: bja:bll0045 transglycosylase YP_003184049.1 KEGG: hch:HCH_06379 hypothetical protein YP_003184051.1 KEGG: mxa:MXAN_1821 hypothetical protein YP_003184052.1 PFAM: AIG2 family protein; KEGG: bgl:bglu_2g19790 hypothetical protein YP_003184055.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003184056.1 PFAM: amino acid permease-associated region; KEGG: pmy:Pmen_3546 inner membrane protein YjeH YP_003184057.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sfu:Sfum_1907 transcriptional regulator, LysR family YP_003184058.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_3493 PilT domain-containing protein YP_003184059.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: pla:Plav_0660 AbrB family transcriptional regulator YP_003184062.1 PFAM: SpoVR family protein; KEGG: afw:Anae109_2539 SpoVR family protein YP_003184063.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_4938 major facilitator transporter YP_003184064.1 PFAM: ThiJ/PfpI domain protein; KEGG: sme:SM_b20212 hypothetical protein YP_003184065.1 KEGG: YALI0B14795p YP_003184066.1 PFAM: conserved hypothetical protein; KEGG: scl:sce2127 hypothetical protein YP_003184067.1 PFAM: conserved hypothetical protein; KEGG: scl:sce2126 hypothetical protein YP_003184068.1 PFAM: SMC domain protein; KEGG: scl:sce2125 hypothetical protein YP_003184069.1 PFAM: conserved hypothetical protein; KEGG: scl:sce2124 hypothetical protein YP_003184070.1 PFAM: protein of unknown function UPF0126; KEGG: xcv:XCV3948 hypothetical protein YP_003184071.1 PFAM: conserved hypothetical protein YP_003184072.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: aeh:Mlg_2042 diguanylate phosphodiesterase YP_003184073.1 KEGG: gsu:GSU2251 hypothetical protein YP_003184074.1 KEGG: similar to APK (APS KINASE); ATP binding / kinase/ transferase, transferring phosphorus- containing groups; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_003184075.1 PFAM: sulfotransferase; KEGG: afr:AFE_1817 sulfotransferase domain protein YP_003184076.1 PFAM: nitroreductase; KEGG: gsu:GSU2525 nitroreductase family protein YP_003184077.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_003184078.1 PFAM: acriflavin resistance protein; KEGG: tgr:Tgr7_1732 acriflavin resistance protein YP_003184079.1 KEGG: eba:ebA6266 hypothetical protein YP_003184080.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_5584 ABC transporter, ATP-binding protein YP_003184082.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt3186 putative ABC transporter, ATP- binding protein YP_003184083.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cja:CJA_0601 transcriptional regulator, GntR family YP_003184084.1 KEGG: cko:CKO_00522 ribonuclease Z; TIGRFAM: ribonuclease Z; PFAM: beta-lactamase domain protein YP_003184085.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3634 major facilitator transporter YP_003184086.1 PFAM: regulatory protein MarR; regulatory protein ArsR; SMART: regulatory protein MarR; KEGG: rpc:RPC_3635 MarR family transcriptional regulator YP_003184087.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: pha:PSHAb0106 potassium/proton antiporter YP_003184089.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt0364 putative ATP binding component of ABC transporter YP_003184090.1 PFAM: ABC-2 type transporter; KEGG: ilo:IL0311 ABC-type multidrug transport system, permease component YP_003184091.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: xac:XAC3994 two-component system sensor protein YP_003184092.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: xca:xccb100_4097 two-component system response regulator, LuxR family YP_003184093.1 PFAM: metallophosphoesterase; KEGG: scl:sce8469 putative protein phosphatase YP_003184094.1 KEGG: pcr:Pcryo_1500 hypothetical protein YP_003184095.1 PFAM: cytochrome C oxidase subunit II transmembrane region; cytochrome c oxidase subunit II; KEGG: oan:Oant_0048 ubiquinol oxidase, subunit II YP_003184096.1 KEGG: yen:YE3142 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome aa3 quinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_003184097.1 PFAM: cytochrome c oxidase subunit III; KEGG: ppw:PputW619_4374 cytochrome o ubiquinol oxidase, subunit III YP_003184098.1 TIGRFAM: cytochrome aa3 quinol oxidase, subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: tau:Tola_2083 cytochrome o ubiquinol oxidase subunit IV YP_003184099.1 PFAM: cytochrome oxidase assembly; KEGG: acp:A2cp1_0224 cytochrome oxidase assembly YP_003184100.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rpc:RPC_4073 serine-type D-Ala-D-Ala carboxypeptidase YP_003184101.1 PFAM: O-methyltransferase family 3; KEGG: bte:BTH_II1123 O-methyltransferase family protein YP_003184102.1 KEGG: bps:BPSS2145 hypothetical protein YP_003184103.1 KEGG: bpy:Bphyt_2395 haemagluttinin domain protein YP_003184104.1 PFAM: aldo/keto reductase; KEGG: bbt:BBta_4719 aldo/keto reductase family oxidoreductase YP_003184105.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ppu:PP_2803 1,3-propanediol dehydrogenase YP_003184106.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tgr:Tgr7_2595 short-chain dehydrogenase/reductase SDR YP_003184107.1 PFAM: protein of unknown function DUF420; KEGG: afw:Anae109_0944 hypothetical protein YP_003184108.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: dar:Daro_1473 antibiotic biosynthesis monooxygenase YP_003184109.1 KEGG: lch:Lcho_2473 cobalamin B12-binding domain- containing protein YP_003184110.1 KEGG: scl:sce4190 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: MCP methyltransferase CheR-type; PAC repeat- containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein YP_003184112.1 PFAM: cobalamin B12-binding domain protein; KEGG: rpe:RPE_1486 cobalamin B12-binding domain protein YP_003184114.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpa:RPA3287 short-chain dehydrogenase/reductase SDR YP_003184115.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: smt:Smal_0432 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003184116.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csa:Csal_2901 GCN5-related N- acetyltransferase YP_003184118.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: geo:Geob_0379 UvrD/REP helicase YP_003184119.1 KEGG: mxa:MXAN_5637 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; zinc- finger NAD-dependent DNA ligase C4-type; BRCT domain protein; helix-hairpin-helix motif; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase ; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1 YP_003184123.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: dps:DP0644 Glu-tRNA(Gln) amidotransferase, subunit C YP_003184124.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; KEGG: afw:Anae109_4338 glutamyl-tRNA(Gln) amidotransferase, A subunit YP_003184125.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; GatB central domain protein; KEGG: gsu:GSU3380 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_003184126.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: asa:ASA_3662 RNA methyltransferase YP_003184127.1 KEGG: hypothetical protein YP_003184128.1 KEGG: hypothetical LOC643696 YP_003184130.1 PFAM: transcriptional regulator domain protein; KEGG: mxa:MXAN_4777 DNA-binding response regulator phoP1 YP_003184133.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: similar to ATP-binding cassette transporter YP_003184135.1 KEGG: tau:Tola_2495 auxin efflux carrier YP_003184136.1 PFAM: sodium/hydrogen exchanger; KEGG: cja:CJA_2911 putative pH regulated Na(+)/H(+) antiporter YP_003184137.1 PFAM: Ferritin Dps family protein; KEGG: kpu:KP1_1799 DNA protection during starvation conditions YP_003184138.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: msu:MS2329 rhamnulokinase YP_003184139.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; class II aldolase/adducin family protein; KR domain protein; KEGG: avi:Avi_6264 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YP_003184140.1 TIGRFAM: L-rhamnose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_2116 L-rhamnose catabolism isomerase YP_003184141.1 PFAM: protein of unknown function DUF1362; KEGG: noc:Noc_0463 hypothetical protein YP_003184142.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SM_b20503 putative sugar ABC transporter ATP-binding protein YP_003184143.1 PFAM: inner-membrane translocator; KEGG: bph:Bphy_3462 monosaccharide-transporting ATPase YP_003184144.1 PFAM: inner-membrane translocator; KEGG: sek:SSPA3647 putative ABC transporter, membrane component YP_003184145.1 KEGG: hsm:HSM_1947 ABC transporter, solute-binding, sugar transport YP_003184146.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: ypy:YPK_3397 DeoR family transcriptional regulator YP_003184147.1 PFAM: transposase IS4 family protein; KEGG: dat:HRM2_33940 transposase family protein YP_003184149.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: pmu:PM1854 hypothetical protein YP_003184150.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: dat:HRM2_14000 cysteine-rich domain family protein (CCG family protein) YP_003184151.1 PFAM: protein of unknown function DUF1657 YP_003184152.1 PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: hypothetical protein YP_003184153.1 TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein YP_003184154.1 TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein YP_003184155.1 TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein YP_003184156.1 PFAM: acyltransferase 3; KEGG: scl:sce8980 hypothetical protein YP_003184157.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: rhi:NGR_c25880 malate/L-sulfolactate dehydrogenase YP_003184158.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bvi:Bcep1808_1851 arylesterase YP_003184159.1 PFAM: lipolytic protein G-D-S-L family; KEGG: hypothetical protein YP_003184160.1 KEGG: ppr:PBPRA0144 hypothetical protein YP_003184161.1 PFAM: AMP-dependent synthetase and ligase; KEGG: Os04g0683700; hypothetical protein YP_003184162.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: yen:YE3130 peptidyl-prolyl cis-trans isomerase (rotamase D) YP_003184163.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: spl:Spea_4043 general substrate transporter YP_003184164.1 PFAM: protein of unknown function DUF378; KEGG: ret:RHE_PE00374 hypothetical protein YP_003184165.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dvl:Dvul_1439 diaminopimelate decarboxylase YP_003184166.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: vpa:VP1873 fumarate hydratase, class I YP_003184167.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3- methyltransferase; KEGG: pmy:Pmen_3122 glyoxalase/bleomycin resistance protein/dioxygenase YP_003184168.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bbt:BBta_1556 manganese/divalent cation transport protein YP_003184169.1 PFAM: polysaccharide biosynthesis protein; KEGG: avn:Avin_05310 hypothetical protein YP_003184170.1 KEGG: scl:sce2436 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; cytidine deaminase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; CMP/dCMP deaminase zinc- binding; Glycosyl transferase, family 3-like YP_003184171.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: probabale oligoendopeptidase F ; K08602 oligoendopeptidase F YP_003184172.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dol:Dole_0426 signal transduction histidine kinase, nitrogen specific, NtrB YP_003184173.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pyrroline-5-carboxylate reductase family protein ; K00286 pyrroline-5-carboxylate reductase YP_003184174.1 PFAM: phosphoglycerate kinase; KEGG: pca:Pcar_1332 phosphoglycerate kinase YP_003184175.1 TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: afw:Anae109_2280 triose-phosphate isomerase YP_003184176.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_003184177.1 KEGG: gur:Gura_1780 phosphopyruvate hydratase; TIGRFAM: enolase; PFAM: enolase YP_003184178.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: afw:Anae109_2279 preprotein translocase, SecG subunit YP_003184179.1 PFAM: major facilitator superfamily MFS_1; KEGG: pmy:Pmen_1245 major facilitator transporter YP_003184180.1 KEGG: geo:Geob_3391 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein YP_003184181.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: gme:Gmet_1646 SsrA-binding protein YP_003184182.1 PFAM: Aldehyde Dehydrogenase; KEGG: pat:Patl_3760 betaine-aldehyde dehydrogenase YP_003184183.1 PFAM: Protein of unknown function DUF2294 YP_003184184.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_003184185.1 PFAM: Protein of unknown function DUF2309; KEGG: lpn:lpg0221 hypothetical protein YP_003184186.1 KEGG: hypothetical protein LOC100207221 YP_003184187.1 PFAM: glycosyl transferase group 1; KEGG: maq:Maqu_1899 glycosyl transferase, group 1 YP_003184190.1 KEGG: xfm:Xfasm12_1595 hypothetical protein YP_003184191.1 PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: hypothetical protein YP_003184192.1 PFAM: Peptidase S53 propeptide; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bxe:Bxe_B1994 kumamolisin YP_003184193.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_003184194.1 TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: har:HEAR3454 putative monooxygenase YP_003184195.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cvi:CV_0912 hypothetical protein YP_003184196.1 PFAM: amino acid permease-associated region; KEGG: bpd:BURPS668_A1106 amino acid permease YP_003184197.1 TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; KEGG: dar:Daro_0072 hypothetical protein YP_003184198.1 TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; KEGG: tgr:Tgr7_3088 UreA carboxylase-associated protein 1 YP_003184199.1 KEGG: tgr:Tgr7_3089 UreA carboxylase; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl- phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; RimK domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1 YP_003184200.1 TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: reu:Reut_B4882 amidase YP_003184201.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5304 binding-protein-dependent transport systems inner membrane component YP_003184202.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter, permease protein YP_003184203.1 PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll4138 ABC transporter substrate-binding protein YP_003184205.1 PFAM: major facilitator superfamily MFS_1; KEGG: dma:DMR_22090 major facilitator superfamily protein YP_003184206.1 PFAM: Acetamidase/Formamidase; KEGG: rpd:RPD_4293 acetamidase/formamidase YP_003184208.1 KEGG: bpd:BURPS668_A3025 putative lipoprotein YP_003184210.1 TIGRFAM: signal peptidase I; PFAM: Peptidase S24, S26A and S26B, conserved region; KEGG: pfs:PFLU1059 signal peptidase I YP_003184211.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0844 putative aldo/keto reductase YP_003184212.1 TIGRFAM: peptide chain release factor 3; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mxa:MXAN_5992 peptide chain release factor 3 YP_003184213.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: aeh:Mlg_1727 peptidase M14, carboxypeptidase A YP_003184214.1 PFAM: glycosyl transferase group 1; KEGG: sat:SYN_01902 mannosyltransferase YP_003184215.1 KEGG: dps:DP2453 glycosyltransferase YP_003184217.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: rfr:Rfer_0435 NAD-dependent epimerase/dehydratase YP_003184218.1 PFAM: glycoside hydrolase clan GH-D; KEGG: hypothetical protein YP_003184219.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rle:RL2323 putative GFO/IDH/MocA dehydrogenase YP_003184220.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: hypothetical protein YP_003184221.1 KEGG: hypothetical protein YP_003184222.1 KEGG: ppd:Ppro_1041 hypothetical protein YP_003184223.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: ade:Adeh_3184 glycosyltransferase 36 YP_003184224.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bam:Bamb_1604 major facilitator transporter YP_003184225.1 PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: vfi:VF_A0348 DNA-binding transcriptional repressor EbgR YP_003184226.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2313 binding-protein-dependent transport systems inner membrane component YP_003184227.1 PFAM: extracellular solute-binding protein family 1; KEGG: lch:Lcho_3240 extracellular solute-binding protein YP_003184228.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lch:Lcho_3242 binding-protein-dependent transport systems inner membrane component YP_003184229.1 PFAM: glycoside hydrolase family 4; KEGG: spe:Spro_3103 glycoside hydrolase family protein YP_003184230.1 forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle, glyoxylate cycle and respiration YP_003184231.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C YP_003184232.1 TIGRFAM: methylisocitrate lyase; KEGG: oca:OCAR_7074 methylisocitrate lyase YP_003184233.1 TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: acp:A2cp1_3597 threonine dehydratase YP_003184235.1 PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ATCLPC; ATCLPC (CASEINOLYTIC PROTEASE C); ATP binding / ATPase YP_003184236.1 KEGG: GJ12603 gene product from transcript GJ12603- RA YP_003184237.1 PFAM: regulatory protein TetR; KEGG: maq:Maqu_0595 TetR family transcriptional regulator YP_003184238.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA YP_003184239.1 PFAM: phenylacetic acid degradation B; KEGG: dac:Daci_0811 phenylacetate-CoA oxygenase subunit PaaB YP_003184240.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: nha:Nham_0930 phenylacetate-CoA oxygenase, PaaI subunit YP_003184241.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: mpt:Mpe_A0990 putative ring oxidation complex protein 3 YP_003184242.1 KEGG: dat:HRM2_23910 PaaK2 YP_003184243.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: reh:H16_B2020 hypothetical protein YP_003184244.1 KEGG: bph:Bphy_3182 hypothetical protein YP_003184245.1 PFAM: Aldehyde Dehydrogenase; KEGG: bmj:BMULJ_05163 NADP-dependent succinate- semialdehyde dehydrogenase YP_003184246.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SM_b21633 enoyl-CoA hydratase YP_003184247.1 KEGG: gbm:Gbem_1434 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003184248.1 PFAM: protein of unknown function DUF195; KEGG: dar:Daro_1600 hypothetical protein YP_003184250.1 PFAM: LrgB family protein; KEGG: acp:A2cp1_0099 LrgB family protein YP_003184251.1 PFAM: LrgA family protein; KEGG: ade:Adeh_0083 LrgA YP_003184252.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ade:Adeh_2212 LysR family transcriptional regulator YP_003184253.1 PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_3627 thioesterase superfamily protein YP_003184254.1 PFAM: Negative transcriptional regulator; KEGG: bbr:BB0424 putative regulatory protein YP_003184255.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: dol:Dole_1983 histidinol-phosphate aminotransferase YP_003184256.1 KEGG: sfu:Sfum_2648 pyruvate dehydrogenase (acetyl- transferring); TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003184257.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gbm:Gbem_0460 transketolase central region YP_003184258.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: scl:sce1569 dihydrolipoyllysine-residue acetyltransferase YP_003184259.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_3485 enoyl-CoA hydratase/isomerase YP_003184260.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: vcj:VCD_001420 RarD protein YP_003184261.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: lpn:lpg1638 drug:proton antiporter YP_003184262.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ank:AnaeK_3354 alcohol dehydrogenase zinc- binding domain protein YP_003184264.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eca:ECA1158 putative multidrug transporter membrane\ATP-binding components YP_003184265.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aha:AHA_2425 drug efflux ABC transporter ATP- binding and permease subunits YP_003184266.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: tmz:Tmz1t_1612 quinone oxidoreductase, YhdH/YhfP family YP_003184267.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: smt:Smal_3479 oligopeptidase B YP_003184268.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce5644 carbohydrate ABC transporter YP_003184269.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce5645 carbohydrate ABC transporter YP_003184271.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: hypothetical protein YP_003184272.1 PFAM: Protein of unknown function DUF2294 YP_003184273.1 PFAM: formate/nitrite transporter; KEGG: psp:PSPPH_4690 formate transporter YP_003184274.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; molydopterin dinucleotide-binding region; KEGG: xcc:XCC2664 formate dehydrogenase related protein YP_003184275.1 PFAM: protein of unknown function DUF1641 YP_003184276.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_1888 NADH dehydrogenase YP_003184278.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: rpt:Rpal_4950 rhodanese domain protein YP_003184279.1 PFAM: aldo/keto reductase; KEGG: prostaglandin f2-alpha synthase YP_003184280.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: gur:Gura_2317 putative alpha- isopropylmalate/homocitrate synthase family transferase YP_003184281.1 PFAM: major facilitator superfamily MFS_1; KEGG: spq:SPAB_02377 drug efflux system protein MdtG YP_003184282.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: nma:NMA1921 hypothetical protein YP_003184283.1 KEGG: kpn:KPN_00562 hypothetical protein YP_003184285.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: Oligopeptidase F; peptidase M3A and M3B thimet/oligopeptidase F; KEGG: hypothetical protein YP_003184286.1 PFAM: methyladenine glycosylase; KEGG: dvu:DVU0356 DNA-3-methyladenine glycosylase I YP_003184287.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Redoxin domain protein; KEGG: prw:PsycPRwf_2309 thioredoxin YP_003184288.1 KEGG: sfu:Sfum_2572 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_003184289.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_3281 ABC transporter related YP_003184290.1 PFAM: YceI family protein; KEGG: ank:AnaeK_0992 YceI family protein YP_003184291.1 PFAM: helix-turn-helix HxlR type; KEGG: oca:OCAR_5707 helix-turn-helix, HxlR type YP_003184292.1 KEGG: bph:Bphy_0293 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003184293.1 KEGG: scl:sce0740 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase YP_003184294.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dal:Dalk_3666 transcriptional regulator, MarR family YP_003184295.1 PFAM: Protein of unknown function DUF2071; KEGG: acp:A2cp1_1656 hypothetical protein YP_003184296.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: afw:Anae109_0319 glutamate--tRNA ligase YP_003184297.1 PFAM: Aldehyde Dehydrogenase; KEGG: sfu:Sfum_1309 aldehyde dehydrogenase (NAD(+)) YP_003184298.1 PFAM: aldo/keto reductase; KEGG: scl:sce5048 oxidoreductase YP_003184299.1 KEGG: ade:Adeh_3785 hypothetical protein; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase YP_003184300.1 PFAM: isochorismatase hydrolase; KEGG: sfu:Sfum_2603 isochorismatase hydrolase YP_003184301.1 KEGG: bmj:BMULJ_04161 hypothetical protein YP_003184302.1 PFAM: lipolytic protein G-D-S-L family; KEGG: acp:A2cp1_0086 lipolytic protein G-D-S-L family YP_003184303.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1190 Bcr/CflA subfamily drug resistance transporter YP_003184304.1 KEGG: aeh:Mlg_1110 hypothetical protein YP_003184305.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: hypothetical protein YP_003184306.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpd:BURPS668_A3033 major facilitator family transporter YP_003184307.1 PFAM: GCN5-related N-acetyltransferase; KEGG: reu:Reut_A1429 GCN5-related N- acetyltransferase YP_003184308.1 PFAM: protein of unknown function DUF985; KEGG: ppd:Ppro_3205 hypothetical protein YP_003184309.1 PFAM: Protein of unknown function DUF1806 YP_003184310.1 PFAM: LmbE family protein; KEGG: sme:SMc00503 hypothetical protein YP_003184311.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: ngk:NGK_1388 low molecular weight protein tyrosine-phosphatase YP_003184314.1 PFAM: Thioredoxin domain; KEGG: Thioredoxin family protein YP_003184315.1 PFAM: CoA-binding domain protein; KEGG: dol:Dole_3063 CoA-binding domain-containing protein YP_003184316.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: acp:A2cp1_4094 thioredoxin reductase YP_003184317.1 KEGG: azo:azo2561 hypothetical protein YP_003184318.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: esa:ESA_03303 hypothetical protein YP_003184319.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: kpu:KP1_2757 putative DeoR-family bacterial regulatory protein YP_003184320.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: asa:ASA_1940 1-phosphofructokinase YP_003184321.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; KEGG: ppr:PBPRA1575 PTS system, fructose-specific IIBC component YP_003184323.1 PFAM: Amidase; KEGG: mxa:MXAN_3566 amidase YP_003184324.1 PFAM: protein of unknown function DUF423; KEGG: mxa:MXAN_2377 hypothetical protein YP_003184325.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gbm:Gbem_1947 protein of unknown function DUF6 transmembrane YP_003184326.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: nmu:Nmul_A2303 peptidase S9, prolyl oligopeptidase active site region YP_003184327.1 PFAM: Domain of unknown function DUF1801; KEGG: bph:Bphy_5464 hypothetical protein YP_003184328.1 PFAM: zinc finger SWIM domain protein; KEGG: xom:XOO_3944 hypothetical protein YP_003184329.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: geo:Geob_1413 cystathionine gamma-synthase YP_003184330.1 KEGG: shl:Shal_1399 methyltransferase type 11 YP_003184331.1 KEGG: sfu:Sfum_2648 pyruvate dehydrogenase (acetyl- transferring); TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003184332.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: afw:Anae109_1994 transketolase central region YP_003184333.1 activates fatty acids by binding to coenzyme A YP_003184334.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: glycolate oxidase YP_003184335.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: afw:Anae109_1366 maf protein YP_003184337.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; glucose-inhibited division protein A; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dps:DP3117 hypothetical protein YP_003184338.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eba:p2A115 hypothetical protein YP_003184339.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pca:Pcar_1095 NADH-dependent butanol dehydrogenase II YP_003184340.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rle:pRL100275 putative transcriptional regulator YP_003184341.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: rec:RHECIAT_CH0003419 putative amylo-alpha- 1,6-glucosidase protein YP_003184342.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMa1364 ABC transporter, periplasmic solute-binding protein YP_003184343.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avi:Avi_7347 ABC transporter membrane spanning protein (sugar) YP_003184344.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20233 putative sugar ABC transporter permease protein YP_003184345.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: scl:sce8137 aconitate hydratase YP_003184346.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: sfu:Sfum_3327 glycosyl transferase, family 4 YP_003184347.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: ppg:PputGB1_0853 protoheme IX farnesyltransferase YP_003184348.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bmu:Bmul_1502 alcohol dehydrogenase YP_003184349.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sme:SMc03929 putative zinc-type alcohol dehydrogenase transmembrane protein YP_003184350.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_003184351.1 PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: mxa:MXAN_7387 chitinase, class I YP_003184352.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: scl:sce8896 ATP phosphoribosyltransferase regulatory subunit YP_003184353.1 KEGG: pfs:PFLU0895 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_003184354.1 KEGG: sat:SYN_01792 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003184355.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: dps:DP1328 imidazoleglycerol-phosphate dehydratase YP_003184356.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: pca:Pcar_2686 imidazole glycerol phosphate synthase subunit HisH YP_003184357.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: xfn:XfasM23_1348 phosphoribosylformimino-5- aminoimidazole carboxamide ribotide isomerase YP_003184358.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: gur:Gura_4053 imidazole glycerol phosphate synthase subunit HisF YP_003184359.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mxa:MXAN_4222 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase YP_003184361.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: msu:MS1754 RhaT protein YP_003184362.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_B1699 alcohol dehydrogenase zinc- containing YP_003184363.1 PFAM: amino acid permease-associated region; KEGG: pap:PSPA7_3841 putative amino acid permease YP_003184365.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: glo:Glov_1749 riboflavin biosynthesis protein RibD YP_003184366.1 KEGG: sfu:Sfum_1379 riboflavin synthase subunit alpha; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein YP_003184367.1 TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2- butanone 4-phosphate synthase; PFAM: GTP cyclohydrolase II; 34-dihydroxy-2- butanone 4-phosphate synthase; KEGG: pca:Pcar_1447 putative bifunctional enzyme 3,4-dihydroxy-2-butanone 4-phosphate/GTP cyclohydrolase II YP_003184368.1 KEGG: hap:HAPS_1137 riboflavin synthase subunit beta; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003184369.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pca:Pcar_2370 cold shock proteins YP_003184370.1 TIGRFAM: prevent-host-death family protein; KEGG: bpy:Bphyt_0093 prevent-host-death family protein YP_003184371.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: bpy:Bphyt_0094 protein of unknown function DUF132 YP_003184373.1 PFAM: ABC-type thiamin-related transport system, permease component 1, predicted YP_003184374.1 PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase; KEGG: dal:Dalk_4065 ABC transporter related YP_003184375.1 TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: dal:Dalk_2752 transketolase YP_003184376.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: acp:A2cp1_1516 transcriptional regulator, LysR family YP_003184377.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA methyl transferase-like; PP-loop domain protein; KEGG: ftm:FTM_0043 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase YP_003184380.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: hypothetical protein YP_003184381.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: cja:CJA_1940 thiosulfate sulfurtransferase YP_003184383.1 PFAM: LmbE family protein; KEGG: pla:Plav_1416 LmbE family protein YP_003184384.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl- CoA dehydrogenase domain protein; KEGG: avn:Avin_31100 acyl-CoA dehydrogenase family protein YP_003184386.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: lpp:lpp1946 hypothetical protein YP_003184387.1 PFAM: ThiJ/PfpI domain protein; KEGG: tcx:Tcr_1780 DJ-1 YP_003184388.1 PFAM: UvrD/REP helicase; KEGG: gme:Gmet_0089 ATP-dependent DNA helicase PcrA YP_003184390.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_1638 putative acetyltransferase YP_003184391.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: tgr:Tgr7_1483 nitrogen-fixing NifU domain protein YP_003184392.1 PFAM: pseudouridine synthase; KEGG: acp:A2cp1_3526 pseudouridine synthase, RluA family YP_003184393.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: xac:XAC3875 ribonuclease BN YP_003184394.1 KEGG: hypothetical protein ; K01633 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_003184395.1 KEGG: sat:SYN_01806 putative cytoplasmic protein YP_003184396.1 KEGG: similar to RT01017p ; K09091 hairy and enhancer of split related with YRPW motif YP_003184397.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: membrane associated protein YP_003184398.1 PFAM: Dynamin family protein; KEGG: hypothetical protein YP_003184399.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: dal:Dalk_3617 2-alkenal reductase YP_003184400.1 PFAM: SNARE associated Golgi protein; KEGG: cff:CFF8240_0819 DedA family protein YP_003184402.1 PFAM: Resolvase domain; Recombinase; KEGG: nha:Nham_4607 resolvase-like protein YP_003184405.1 KEGG: nam:NAMH_1733 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I YP_003184406.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: asa:ASA_3721 iron/manganese superoxide dismutase YP_003184407.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hha:Hhal_0598 short-chain dehydrogenase/reductase SDR YP_003184408.1 KEGG: acp:A2cp1_2662 dihydroorotate oxidase; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase YP_003184409.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rhi:NGR_b21500 RNA polymerase sigma-70 factor YP_003184411.1 KEGG: sat:SYN_00979 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003184412.1 PFAM: protein of unknown function DUF59; KEGG: cja:CJA_1472 domain of unknown function domain protein YP_003184413.1 KEGG: noc:Noc_2489 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase YP_003184414.1 PFAM: SufBD protein; KEGG: oan:Oant_2255 cysteine desulfurase activator complex subunit SufB YP_003184415.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: mxa:MXAN_1156 cysteine desulfurase SufS YP_003184416.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: lpc:LPC_2694 nitrogen fixation protein (Fe-S cluster formation) NifU YP_003184417.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: similar to ABC transporter subunit YP_003184418.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bxe:Bxe_C0940 putative Rieske (2Fe-2S) ferredoxin YP_003184419.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: scl:sce5758 hypothetical protein YP_003184421.1 KEGG: EIF4G3; eukaryotic translation initiation factor 4 gamma, 3 ; K03260 translation initiation factor eIF-4F YP_003184422.1 PFAM: inositol monophosphatase; KEGG: hypothetical protein YP_003184423.1 TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: cha:CHAB381_0113 putative nicotinate phosphoribosyltransferase YP_003184424.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_003184427.1 PFAM: amino acid permease-associated region; KEGG: pfl:PFL_1414 amino acid transporter, putative YP_003184428.1 PFAM: peptidase M24; KEGG: gsu:GSU2021 xaa-pro dipeptidase YP_003184432.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: mxa:MXAN_7274 SNF2/helicase domain-containing protein YP_003184433.1 PFAM: zinc finger SWIM domain protein YP_003184434.1 KEGG: acp:A2cp1_2337 hypothetical protein YP_003184436.1 KEGG: mxa:MXAN_3982 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_003184437.1 PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: acp:A2cp1_1900 phospholipase D/transphosphatidylase YP_003184438.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: vap:Vapar_5571 phosphoesterase PA-phosphatase related YP_003184439.1 KEGG: gur:Gura_2109 hypothetical protein YP_003184440.1 PFAM: OsmC family protein; KEGG: aeh:Mlg_2245 OsmC family protein YP_003184441.1 PFAM: histidine triad (HIT) protein; KEGG: csa:Csal_0911 histidine triad (HIT) protein YP_003184442.1 PFAM: aminotransferase class IV; KEGG: tgr:Tgr7_2706 D-amino-acid transaminase YP_003184443.1 PFAM: MazG nucleotide pyrophosphohydrolase YP_003184444.1 KEGG: gme:Gmet_2994 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2 YP_003184445.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfs:PFLU2767 putative transmembrane transport protein YP_003184446.1 PFAM: peptidase M16 domain protein; KEGG: hypothetical protein YP_003184447.1 PFAM: peptidase M16 domain protein; KEGG: mes:Meso_0430 peptidase M16-like YP_003184448.1 KEGG: sun:SUN_1075 hypothetical protein YP_003184449.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: abo:ABO_0807 threonine synthase YP_003184450.1 KEGG: hypothetical protein ; K00872 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003184451.1 PFAM: thioesterase superfamily protein; KEGG: tau:Tola_0598 thioesterase superfamily protein YP_003184452.1 PFAM: NUDIX hydrolase; KEGG: dac:Daci_1452 beta-lactamase domain- containing protein YP_003184453.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; glutamine amidotransferase class-I; KEGG: saz:Sama_0765 cobyric acid synthase YP_003184454.1 PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: pca:Pcar_2206 UDP-N-acetylmuramyl pentapeptide synthase YP_003184455.1 PFAM: arsenate reductase and related; KEGG: scl:sce6040 ArsC family protein YP_003184456.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: kpe:KPK_4589 2'-5' RNA ligase YP_003184457.1 PFAM: beta-lactamase domain protein; KEGG: ank:AnaeK_3052 beta-lactamase domain protein YP_003184458.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: geo:Geob_0779 cell division protein FtsW YP_003184459.1 KEGG: similar to RNA binding protein YP_003184460.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pca:Pcar_1855 glycerophosphodiester phosphodiesterase YP_003184461.1 PFAM: cell cycle protein; KEGG: mxa:MXAN_2648 rod shape-determining protein RodA YP_003184462.1 PFAM: aminotransferase class I and II; KEGG: hypothetical protein YP_003184463.1 KEGG: pfl:PFL_5995 alginate regulatory protein AlgP YP_003184466.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: hypothetical protein YP_003184467.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cbc:CbuK_0876 thioredoxin peroxidase YP_003184468.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: pla:Plav_3020 iron-sulfur cluster assembly accessory protein YP_003184469.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: scl:sce3000 hypothetical protein YP_003184470.1 PFAM: SNARE associated Golgi protein; KEGG: mfa:Mfla_1749 hypothetical protein YP_003184471.1 PFAM: Domain of unknown function DUF1805; KEGG: bav:BAV1795 hypotheticalprotein YP_003184472.1 PFAM: peptidase M42 family protein; peptidase M18 aminopeptidase I; KEGG: sfu:Sfum_3414 peptidase M42 family protein YP_003184473.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: CGL68; vanadium-dependent haloperoxidase-like protein YP_003184474.1 PFAM: NUDIX hydrolase; KEGG: gme:Gmet_0988 NUDIX hydrolase YP_003184475.1 PFAM: protein of unknown function DUF86; KEGG: shn:Shewana3_1792 hypothetical protein YP_003184476.1 PFAM: 3D domain protein; KEGG: dps:DP1968 hypothetical protein YP_003184477.1 PFAM: NLP/P60 protein; KEGG: xac:XAC2753 lipoprotein YP_003184480.1 PFAM: Integrase catalytic region; KEGG: sat:SYN_01387 integrase core subunit YP_003184481.1 KEGG: har:HEAR2359 putative permease YP_003184482.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: geo:Geob_2027 alpha/beta hydrolase fold-3 domain protein YP_003184483.1 KEGG: nmu:Nmul_A0278 glycosyl transferase family protein YP_003184484.1 PFAM: Aldehyde Dehydrogenase; KEGG: par:Psyc_1350 putative aldehyde dehydrogenase YP_003184485.1 TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein YP_003184486.1 PFAM: transposase IS4 family protein; KEGG: dat:HRM2_33940 transposase family protein YP_003184487.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bvi:Bcep1808_4384 6-phosphogluconate dehydrogenase YP_003184488.1 PFAM: integrase family protein; KEGG: bja:bll4526 site-specific integrase YP_003184489.1 PFAM: protein of unknown function DUF955; KEGG: pla:Plav_1823 hypothetical protein YP_003184490.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dia:Dtpsy_3236 transcriptional regulator, XRE family YP_003184491.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sme:SMc00351 hypothetical protein YP_003184492.1 KEGG: mmw:Mmwyl1_3325 XRE family transcriptional regulator YP_003184493.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rpa:RPA4129 XRE family transcriptional regulator YP_003184494.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: nmu:NmulC_2782 helix-hairpin-helix DNA- binding motif-containing protein YP_003184499.1 KEGG: dde:Dde_0902 hypothetical protein YP_003184505.1 PFAM: DNA primase small subunit; KEGG: dal:Dalk_2612 hypothetical protein YP_003184506.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: scl:sce8964 hypothetical protein YP_003184507.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: RNA polymerase YP_003184512.1 KEGG: bja:bll0829 DNA polymerase III subunit beta; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003184517.1 KEGG: sfu:Sfum_3787 hypothetical protein YP_003184521.1 PFAM: endodeoxyribonuclease RusA; KEGG: dno:DNO_0780 endodeoxyribonuclease RusA family protein YP_003184522.1 KEGG: similar to Adenylate kinase 5 ; K00939 adenylate kinase YP_003184524.1 KEGG: yen:YE1790 exodeoxyribonuclease X; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_003184527.1 PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: dde:Dde_0310 CBS YP_003184528.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: lch:Lcho_2475 histidine kinase YP_003184529.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gsu:GSU2145 DNA-binding response regulator YP_003184530.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: oca:OCAR_6181 CumA YP_003184533.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; Redoxin domain protein; KEGG: mxa:MXAN_3252 thiol:disulfide interchange protein DsbE YP_003184534.1 Unusual start codon; PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: gbm:Gbem_3411 cytochrome c biogenesis protein transmembrane region YP_003184535.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: rpf:Rpic12D_4026 multicopper oxidase type 3 YP_003184536.1 PFAM: protein of unknown function DUF156; KEGG: nmu:Nmul_A2278 hypothetical protein YP_003184537.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: nmu:Nmul_A2276 heavy metal translocating P- type ATPase YP_003184538.1 PFAM: Heavy metal transport/detoxification protein; KEGG: hiq:CGSHiGG_04270 mercuric ion scavenger protein YP_003184539.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: afe:Lferr_0168 hypothetical protein YP_003184540.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: mfa:Mfla_1979 flagellar hook-basal body protein FliE YP_003184541.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: wsu:WS1666 flagellar basal body rod protein FlgC YP_003184542.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: bba:Bd3407 flagellar basal-body rod protein FlgB YP_003184544.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_2873 glyoxalase/bleomycin resistance protein/dioxygenase YP_003184545.1 PFAM: cation efflux protein; KEGG: gsu:GSU2959 hypothetical protein YP_003184546.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ccv:CCV52592_1452 zinc transporter ZitB YP_003184547.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gsu:GSU2149 ArsR family transcriptional regulator YP_003184548.1 PFAM: YolD-like protein YP_003184549.1 KEGG: mmw:Mmwyl1_0127 hypothetical protein YP_003184550.1 KEGG: wpi:WPa_0240 hypothetical protein YP_003184554.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: bgl:bglu_1g01510 DNA cytosine methyltransferase M.NgoMIII YP_003184555.1 PFAM: Restriction endonuclease, type II, Eco29kI; KEGG: bgl:bglu_1g01500 hypothetical protein YP_003184558.1 KEGG: vfi:VF_2289 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_003184560.1 PFAM: glycosidase PH1107-related; KEGG: ypb:YPTS_2609 glycosidase PH1107-related YP_003184562.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein YP_003184565.1 PFAM: AIG2 family protein; KEGG: mxa:MXAN_1819 hypothetical protein YP_003184570.1 KEGG: hypothetical protein YP_003184571.1 PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: dac:Daci_1622 hypothetical protein YP_003184577.1 PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: noc:Noc_3082 ParB-like partition protein YP_003184580.1 KEGG: GM13388 gene product from transcript GM13388- RA YP_003184582.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: noc:Noc_1199 transposase IS605 YP_003184583.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: xfa:XF0935 methyltransferase YP_003184585.1 PFAM: BRO domain protein; KEGG: ecv:APECO1_4056 putative anti-repressor protein YP_003184586.1 PFAM: Sigma-70 region 4 type 2; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: afw:Anae109_2743 two component LuxR family transcriptional regulator YP_003184588.1 KEGG: proteophosphoglycan ppg4 YP_003184589.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: tau:Tola_0953 membrane-bound metal-dependent hydrolase YP_003184594.1 PFAM: Lytic transglycosylase catalytic; KEGG: sbl:Sbal_4189 Ig family protein YP_003184595.1 KEGG: pmy:Pmen_0507 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003184596.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dat:HRM2_34270 two-component response regulator fusion protein (N:response regulator receiver- C:HD-GAF domain protein) YP_003184597.1 KEGG: vvy:VV2005 Flp pilus assembly protein TadC YP_003184602.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: reu:Reut_A2629 hypothetical protein YP_003184603.1 KEGG: hch:HCH_06378 ATPase YP_003184607.1 PFAM: Ig domain protein group 1 domain protein; SMART: Ig domain protein group 1 domain protein; KEGG: pap:PSPA7_3412 hypothetical protein YP_003184608.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: hha:Hhal_1584 histone family protein DNA- binding protein YP_003184610.1 KEGG: predicted protein; K03593 ATP-binding protein involved in chromosome partitioning YP_003184611.1 KEGG: dal:Dalk_4977 hypothetical protein YP_003184612.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: sei:SPC_0482 hypothetical 58.9 kDa protein in TesB-hha intergenic region YP_003184614.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mpt:Mpe_A2698 flagellar biosynthesis like protein YP_003184615.1 KEGG: similar to KIAA2032 protein YP_003184616.1 PFAM: type II secretion system protein E; KEGG: rso:RSc0652 secretion ATPase protein YP_003184617.1 KEGG: ret:RHE_PE00314 putative TadB pilus assembly protein YP_003184620.1 KEGG: mxa:MXAN_1821 hypothetical protein YP_003184621.1 PFAM: AIG2 family protein; KEGG: bgl:bglu_2g19790 hypothetical protein YP_003184624.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003184625.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_3493 PilT domain-containing protein YP_003184626.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: pla:Plav_0660 AbrB family transcriptional regulator YP_003184628.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: pol:Bpro_5273 acyl-CoA dehydrogenase-like YP_003184629.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_C6107 1,4-dihydroxy-2-naphthoate synthase YP_003184630.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bbr:BB4750 short chain dehyrogenase YP_003184631.1 PFAM: Protein of unknown function DUF2029; KEGG: oca:OCAR_7174 hypothetical protein YP_003184632.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bpy:Bphyt_4583 transcriptional regulator, LacI family YP_003184633.1 PFAM: extracellular solute-binding protein family 1; KEGG: ara:Arad_0129 sugar ABC transporter YP_003184634.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_0127 sugar ABC transporter YP_003184635.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xom:XOO_2040 ABC transporter sugar permease YP_003184636.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: hypothetical protein YP_003184637.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: eba:ebA4199 anthranilate synthase (component II) YP_003184638.1 PFAM: Chorismate binding-like; KEGG: abo:ABO_2027 anthranilate synthase, component I YP_003184640.1 KEGG: dvm:DvMF_1717 N-acetyl-gamma-glutamyl- phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_003184641.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: cti:RALTA_A0151 acetylglutamate kinase YP_003184642.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mxa:MXAN_3014 acetylornithine transaminase YP_003184643.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_1708 acetyltransferase YP_003184644.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; KEGG: gur:Gura_0393 glutamate synthase (ferredoxin) YP_003184645.1 KEGG: gbm:Gbem_3637 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_003184646.1 KEGG: Os12g0235800; hypothetical protein ; K01940 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003184647.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: pca:Pcar_2418 argininosuccinate lyase YP_003184648.1 KEGG: gme:Gmet_1880 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003184649.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_003184650.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_003184651.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pst:PSPTO_1741 phosphoglycolate phosphatase YP_003184652.1 PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase; KEGG: mca:MCA3005 DEAD-box ATP dependent DNA helicase YP_003184653.1 PFAM: protein of unknown function DUF1156; KEGG: noc:Noc_0655 hypothetical protein YP_003184654.1 KEGG: mca:MCA3011 hypothetical protein YP_003184655.1 KEGG: lpc:LPC_2787 hypothetical protein YP_003184656.1 PFAM: protein of unknown function DUF87; KEGG: mca:MCA1687 hypothetical protein YP_003184657.1 PFAM: transposase IS4 family protein; KEGG: aeh:Mlg_1129 transposase, IS4 family protein YP_003184659.1 KEGG: bte:BTH_II1417 serine metalloprotease MrpA YP_003184661.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pfo:Pfl01_5633 GntR family transcriptional regulator YP_003184662.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hhe:HH0776 ABC transporter YP_003184664.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: sfu:Sfum_0406 rhodanese domain protein YP_003184665.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: TRXm; thioredoxin m YP_003184666.1 PFAM: protein of unknown function DUF302; KEGG: tcx:Tcr_2069 hypothetical protein YP_003184668.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_003184669.1 TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH- dependent FMN reductase; KEGG: net:Neut_0876 flavodoxin/nitric oxide synthase YP_003184670.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_B5875 GntR family transcriptional regulator YP_003184671.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: bxe:Bxe_A1861 hypothetical protein YP_003184672.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_2570 acetate--CoA ligase YP_003184673.1 PFAM: protein of unknown function DUF1292; KEGG: hypothetical protein YP_003184678.1 KEGG: dac:Daci_2645 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003184679.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cbs:COXBURSA331_A1331 aminotransferase, class V YP_003184680.1 TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein; THUMP domain protein; PP-loop domain protein; Queuosine synthesis-like; KEGG: cbg:CbuG_0830 thiamine biosynthesis protein ThiI YP_003184682.1 TIGRFAM: transcription factor, RsfA family; KEGG: similar to homer-1b YP_003184683.1 TIGRFAM: germination protein, Ger(x)C family YP_003184684.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: geo:Geob_2614 3-oxoacyl-(acyl-carrier- protein) reductase YP_003184685.1 PFAM: protein of unknown function UCP012535; KEGG: mxa:MXAN_6193 hypothetical protein YP_003184686.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: sfu:Sfum_3462 MraZ protein YP_003184687.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: gme:Gmet_0404 methyltransferase YP_003184688.1 PFAM: Septum formation initiator YP_003184689.1 KEGG: ppd:Ppro_3295 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; SMART: PASTA domain containing protein YP_003184690.1 KEGG: hypothetical protein; TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein YP_003184691.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: geo:Geob_0775 UDP-N-acetylmuramyl-tripeptide synthetase YP_003184692.1 TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide- transf erase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; KEGG: ilo:IL0433 UDP-N-acetylmuramyl pentapeptide phosphotransferase YP_003184693.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: gme:Gmet_0410 UDP-N-acetylmuramoylalanine--D- glutamate ligase YP_003184694.1 TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein; KEGG: geo:Geob_0779 cell division protein FtsW YP_003184695.1 KEGG: gbm:Gbem_0491 UDP-N-acetylglucosamine--N- acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_003184696.1 KEGG: afr:AFE_0204 UDP-N- acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_003184697.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: lch:Lcho_1553 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003184699.1 PFAM: Resolvase domain; Recombinase; KEGG: mxa:MXAN_1887 resolvase family site-specific recombinase YP_003184700.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: dps:DP2895 cell division protein FtsQ YP_003184701.1 PFAM: protein of unknown function DUF881 YP_003184702.1 PFAM: protein of unknown function DUF881 YP_003184703.1 PFAM: protein of unknown function DUF1290 YP_003184704.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: aeh:Mlg_2188 cell division protein FtsA YP_003184705.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: ftsZ2-2; FtsZ2-2 plastid division protein YP_003184706.1 PFAM: peptidase U4 sporulation factor SpoIIGA YP_003184707.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation YP_003184708.1 TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 4 domain protein; KEGG: pmu:PM1241 RNA polymerase sigma factor RpoD YP_003184709.1 TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein YP_003184710.1 PFAM: protein of unknown function DUF152; KEGG: glo:Glov_0338 protein of unknown function DUF152 YP_003184711.1 PFAM: alanine racemase domain protein; KEGG: dal:Dalk_0394 alanine racemase domain protein YP_003184712.1 PFAM: protein of unknown function YGGT YP_003184713.1 KEGG: predicted protein YP_003184714.1 TIGRFAM: DivIVA domain; PFAM: DivIVA family protein; KEGG: ank:AnaeK_2549 DivIVA family protein YP_003184717.1 TIGRFAM: sporulation protein, yteA family; PFAM: zinc finger DksA/TraR C4-type; KEGG: afw:Anae109_3578 TraR/DksA family transcriptional regulator YP_003184718.1 PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: phosphosulfolactate synthase YP_003184719.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: afr:AFE_0555 signal peptidase II YP_003184720.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: pca:Pcar_2950 suppressor of FtsH mutation YP_003184721.1 PFAM: phosphoribosyltransferase; KEGG: gbm:Gbem_1895 phosphoribosyltransferase YP_003184722.1 TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: hypothetical protein ; K00609 aspartate carbamoyltransferase catalytic subunit YP_003184723.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ank:AnaeK_2241 dihydroorotase, multifunctional complex type YP_003184724.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: pca:Pcar_1613 carbamoyl phosphate synthase small subunit YP_003184725.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; phosphoribosylglycinamide synthetase; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; protein of unknown function DUF201; KEGG: dal:Dalk_3481 carbamoyl-phosphate synthase, large subunit YP_003184726.1 KEGG: aeh:Mlg_0935 orotidine-5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003184727.1 KEGG: cbs:COXBURSA331_A0402 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003184728.1 PFAM: FAD dependent oxidoreductase; monooxygenase FAD-binding; KEGG: sml:Smlt4354 putative oxidoreductase YP_003184729.1 PFAM: major facilitator superfamily MFS_1; KEGG: pla:Plav_1862 major facilitator transporter YP_003184730.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: nmc:NMC1413 putative glutamate dehydrogenase YP_003184731.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: pca:Pcar_1454 RNA-binding protein YP_003184732.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; KEGG: gbm:Gbem_2237 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_003184733.1 PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: afw:Anae109_2574 hypothetical protein YP_003184734.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_003184735.1 KEGG: sat:SYN_02177 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003184736.1 KEGG: afw:Anae109_0770 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003184737.1 KEGG: tmz:Tmz1t_0095 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003184738.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: hha:Hhal_2322 methionyl-tRNA formyltransferase YP_003184739.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ppd:Ppro_3242 sun protein YP_003184740.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: afw:Anae109_2180 radical SAM protein YP_003184741.1 KEGG: bba:Bd0397 protein phosphatase; PFAM: Protein phosphatase 2C-like; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_003184742.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: scl:sce1089 protein kinase YP_003184743.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: nis:NIS_0125 ribosome-associated GTPase YP_003184744.1 KEGG: mxa:MXAN_6297 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003184745.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: afw:Anae109_2515 ribosomal protein L28 YP_003184746.1 KEGG: bba:Bd2324 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003184747.1 PFAM: small acid-soluble spore protein alpha/beta type YP_003184748.1 KEGG: ajs:Ajs_1668 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_003184749.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein YP_003184750.1 PFAM: glycosyl transferase group 1; KEGG: hypothetical protein LOC100259616 YP_003184751.1 PFAM: Amidase; KEGG: bpt:Bpet4891 glutamyl-tRNA amidotransferase YP_003184752.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: ppd:Ppro_2191 putative methyltransferase YP_003184753.1 KEGG: pca:Pcar_1640 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003184754.1 PFAM: Patatin; KEGG: aci:ACIAD2965 putative esterase YP_003184755.1 PFAM: protein of unknown function DUF177; KEGG: gbm:Gbem_3111 protein of unknown function DUF177 YP_003184756.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: dal:Dalk_3305 ribosomal protein L32 YP_003184757.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria YP_003184758.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: mxa:MXAN_4772 putative glycerol-3-phosphate acyltransferase PlsX YP_003184759.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: ade:Adeh_2749 [acyl-carrier-protein] S- malonyltransferase YP_003184760.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: geo:Geob_2614 3-oxoacyl-(acyl-carrier- protein) reductase YP_003184761.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: tcx:Tcr_0713 acyl carrier protein YP_003184762.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: geo:Geob_2616 3-oxoacyl-(acyl-carrier- protein) synthase 2 YP_003184763.1 KEGG: pca:Pcar_1403 RNase III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_003184764.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: Bartomin ; K03529 chromosome segregation protein YP_003184765.1 KEGG: swp:swp_4802 cell division transporter substrate-binding protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_003184766.1 PFAM: putative helix-turn-helix protein YlxM/p13 family protein; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein YP_003184767.1 KEGG: dvm:DvMF_2888 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_003184768.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: sfu:Sfum_3039 ribosomal protein S16 YP_003184769.1 KEGG: acp:A2cp1_2049 hypothetical protein YP_003184770.1 KEGG: hypothetical protein YP_003184771.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: sfu:Sfum_3041 16S rRNA processing protein RimM YP_003184772.1 KEGG: geo:Geob_1490 tRNA (guanine-N1)- methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003184773.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV; KEGG: aav:Aave_3849 para-aminobenzoate synthase, subunit I YP_003184774.1 KEGG: aeh:Mlg_1429 ribosomal large subunit pseudouridine synthase C; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003184775.1 PFAM: thioesterase superfamily protein; KEGG: asa:ASA_0741 Tol system-associated acyl-CoA thioesterase YP_003184776.1 PFAM: Peptidase M23; KEGG: abb:ABBFA_000048 peptidoglycan hydrolase YP_003184777.1 PFAM: thioesterase superfamily protein; KEGG: afw:Anae109_1188 thioesterase superfamily protein YP_003184778.1 PFAM: O-antigen polymerase; KEGG: dal:Dalk_1339 O-antigen polymerase YP_003184782.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: hypothetical protein YP_003184783.1 TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related; KEGG: cja:CJA_1443 predicted GTPase YP_003184784.1 PFAM: ribonuclease HII/HIII; KEGG: tgr:Tgr7_1175 ribonuclease H YP_003184785.1 KEGG: peroxisomal membrane anchor protein, putative YP_003184786.1 KEGG: cff:CFF8240_1181 FlhB domain-containing protein YP_003184787.1 PFAM: protein of unknown function UPF0102; KEGG: mxa:MXAN_3551 hypothetical protein YP_003184788.1 PFAM: polysaccharide deacetylase; KEGG: dds:Ddes_0123 polysaccharide deacetylase YP_003184789.1 PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; KEGG: bpt:Bpet2644 putative chelatase YP_003184791.1 KEGG: ank:AnaeK_2233 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003184792.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA- binding domain protein; KEGG: gbm:Gbem_1465 succinyl-CoA synthetase, alpha subunit YP_003184793.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: gsu:GSU2550 DNA processing protein DprA YP_003184794.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: afr:AFE_2089 hypothetical protein YP_003184795.1 PFAM: cell wall hydrolase SleB; Peptidoglycan- binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: dma:DMR_38230 hypothetical protein YP_003184796.1 PFAM: metal-dependent protein hydrolase; KEGG: pin:Ping_2404 metal-dependent protein hydrolase YP_003184797.1 KEGG: mxa:MXAN_3002 putative DNA protecting protein DprA/DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003184798.1 KEGG: gsu:GSU2547 tRNA (uracil-5-)- methyltransferase Gid; TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A; FAD dependent oxidoreductase YP_003184799.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aeh:Mlg_0063 tyrosine recombinase XerC YP_003184800.1 heat shock protein involved in degradation of misfolded proteins YP_003184801.1 KEGG: sfu:Sfum_0065 ATP-dependent protease ATP- binding subunit; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase YP_003184802.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: gbm:Gbem_3841 flagellar basal-body rod protein FlgB YP_003184803.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: gsu:GSU0408 flagellar basal-body rod protein FlgC YP_003184804.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: maq:Maqu_1998 flagellar hook-basal body complex subunit FliE YP_003184805.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: ajs:Ajs_3807 flagellar M-ring protein FliF YP_003184806.1 TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: glo:Glov_3303 flagellar motor switch protein FliG YP_003184807.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dal:Dalk_0669 flagellar assembly protein FliH YP_003184808.1 KEGG: xac:XAC0412 type III secretion system ATPase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_003184809.1 KEGG: pat:Patl_2940 hypothetical protein YP_003184810.1 KEGG: hypothetical protein YP_003184811.1 PFAM: flagellar hook-length control protein; KEGG: cti:RALTA_B2149 FliK: flagellar biosynthesis protein; hook-length control protein YP_003184812.1 PFAM: flagellar hook capping protein; KEGG: bja:bll6853 flagellar basal body rod modification protein YP_003184815.1 TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: gsu:GSU3051 flagellar basal body rod protein FlgG YP_003184816.1 PFAM: flagellar FlbD family protein; KEGG: geo:Geob_0637 flagellar FlbD family protein YP_003184817.1 PFAM: flagellar basal body-associated protein FliL; KEGG: sat:SYN_02838 flagellar basal body-associated protein YP_003184818.1 TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: nam:NAMH_1346 flagellar motor switch protein FliM YP_003184819.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: ade:Adeh_1364 flagellar motor switch FliN YP_003184820.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mxa:MXAN_6693 fibril biogenesis regulator DifD YP_003184821.1 PFAM: flagellar biosynthesis protein FliO; KEGG: aeh:Mlg_0977 flagellar biosynthesis protein, FliO YP_003184822.1 TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: gme:Gmet_3097 flagellar biosynthesis protein FliP YP_003184823.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: pca:Pcar_1165 flagellar biosynthetic protein FliQ YP_003184824.1 PFAM: type III secretion system inner membrane R protein; KEGG: ppd:Ppro_3442 flagellar biosynthetic protein FliR YP_003184825.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: bba:Bd3322 flagella-associated protein YP_003184826.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: pca:Pcar_1162 flagellar biosynthesis protein FlhA YP_003184827.1 KEGG: ppd:Ppro_3445 GTP-binding signal recognition particle; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase YP_003184828.1 KEGG: dma:DMR_19820 hypothetical protein YP_003184829.1 PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: cco:CCC13826_1580 putative response regulator of two-component system YP_003184830.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: dma:DMR_20770 chemotaxis protein CheW YP_003184831.1 PFAM: CheC domain protein; KEGG: gme:Gmet_3210 CheC, inhibitor of MCP methylation YP_003184832.1 PFAM: CheD family protein; KEGG: gme:Gmet_3209 CheD, stimulates methylation of MCP proteins YP_003184834.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: gur:Gura_3733 30S ribosomal protein S2 YP_003184835.1 TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: gsu:GSU1920 elongation factor Ts YP_003184836.1 KEGG: gbm:Gbem_2754 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003184837.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: dvm:DvMF_2919 ribosome recycling factor YP_003184838.1 KEGG: mxa:MXAN_2555 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003184839.1 PFAM: phosphatidate cytidylyltransferase; KEGG: afw:Anae109_3705 phosphatidate cytidylyltransferase YP_003184840.1 KEGG: pca:Pcar_1915 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003184841.1 KEGG: acp:A2cp1_1249 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_003184842.1 KEGG: glo:Glov_2723 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: Exonuclease; phosphoesterase PHP domain protein YP_003184843.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gbm:Gbem_0558 methylmalonyl-CoA epimerase YP_003184844.1 PFAM: prephenate dehydratase; KEGG: ade:Adeh_1779 prephenate dehydratase YP_003184845.1 TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: lhk:LHK_02149 TypA YP_003184846.1 PFAM: protein of unknown function DUF150; KEGG: pca:Pcar_1552 hypothetical protein YP_003184847.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; KEGG: gur:Gura_1899 transcription elongation factor NusA YP_003184848.1 PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein YP_003184849.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Miro domain protein; GTP-binding protein HSR1-related; KEGG: geo:Geob_2692 translation initiation factor IF-2 YP_003184850.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: gme:Gmet_1587 ribosome-binding factor A YP_003184851.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: geo:Geob_2694 phosphoesterase RecJ domain protein YP_003184852.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: afw:Anae109_1144 tRNA pseudouridine synthase B YP_003184853.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; KEGG: tgr:Tgr7_3215 riboflavin biosynthesis protein RibF YP_003184854.1 PFAM: AIG2 family protein; KEGG: bxe:Bxe_A1646 hypothetical protein YP_003184855.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: gur:Gura_1905 30S ribosomal protein S15 YP_003184856.1 KEGG: gsu:GSU1593 polynucleotide phosphorylase/polyadenylase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Polynucleotide phosphorylase, phosphorolytic RNA- binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; SMART: KH domain protein YP_003184857.1 PFAM: polysaccharide deacetylase; KEGG: dds:Ddes_0123 polysaccharide deacetylase YP_003184858.1 PFAM: peptidase M16 domain protein; KEGG: gsu:GSU1594 M16 family peptidase YP_003184859.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: bpr:GBP346_A0893 dUTP diphosphatase YP_003184860.1 TIGRFAM: dipicolinic acid synthetase, A subunit; PFAM: Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: vap:Vapar_6049 shikimate/quinate 5- dehydrogenase YP_003184861.1 involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme YP_003184862.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; KEGG: dvm:DvMF_2382 aspartate-semialdehyde dehydrogenase YP_003184863.1 KEGG: dvl:Dvul_1251 aspartate kinase; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003184864.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: gur:Gura_0234 dihydrodipicolinate synthase YP_003184865.1 PFAM: Protein of unknown function methylase putative; methyltransferase small; putative RNA methylase; SMART: PUA domain containing protein; KEGG: glo:Glov_1090 protein of unknown function Met10 YP_003184866.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: acp:A2cp1_0390 acyl-CoA dehydrogenase domain protein YP_003184867.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: xcv:XCV1367 3-hydroxyisobutyrate dehydrogenase YP_003184868.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: ank:AnaeK_1629 methylmalonate-semialdehyde dehydrogenase YP_003184869.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: psb:Psyr_1770 enoyl-CoA hydratase/isomerase YP_003184870.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dal:Dalk_0007 AMP-dependent synthetase and ligase YP_003184871.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: reu:Reut_A1669 thiolase YP_003184872.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rlt:Rleg2_4382 short-chain dehydrogenase/reductase SDR YP_003184873.1 PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; D-isomer specific 2-hydroxyacid dehydrogenase NAD- binding; Glu/Leu/Phe/Val dehydrogenase; KEGG: bba:Bd2028 leucine dehydrogenase YP_003184874.1 PFAM: beta-lactamase domain protein; RNA- metabolising metallo-beta-lactamase; KEGG: geo:Geob_3801 beta-lactamase domain protein YP_003184875.1 PFAM: peptidase S14 ClpP; KEGG: ech:ECH_0401 signal peptide peptidase SppA YP_003184877.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; KEGG: sat:SYN_01274 cell division protein YP_003184881.1 PFAM: amino acid-binding ACT domain protein YP_003184882.1 SMART: helix-turn-helix domain protein; KEGG: pca:Pcar_2019 hypothetical protein YP_003184883.1 PFAM: protein of unknown function DUF520; KEGG: glo:Glov_3198 putative nucleotide-binding protein YP_003184884.1 KEGG: dvl:Dvul_1316 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003184885.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: dds:Ddes_1466 competence/damage-inducible protein CinA YP_003184886.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dde:Dde_0152 DEAD/DEAH box helicase-like YP_003184887.1 KEGG: mca:MCA0387 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_003184888.1 PFAM: regulatory protein RecX; KEGG: scl:sce0207 hypothetical protein YP_003184889.1 KEGG: sfu:Sfum_2578 metal dependent phosphohydrolase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_003184890.1 PFAM: Stage V sporulation protein S; KEGG: hypothetical protein YP_003184891.1 PFAM: peptidase M19 renal dipeptidase; KEGG: ara:Arad_7331 membrane dipeptidase protein YP_003184892.1 PFAM: Spore coat protein E YP_003184893.1 KEGG: hypothetical protein YP_003184894.1 KEGG: hypothetical protein YP_003184896.1 KEGG: hypothetical protein YP_003184898.1 KEGG: ngk:NGK_0047 bifunctional enzyme involved in thiolation and methylation of tRNA; TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB YP_003184899.1 PFAM: protein of unknown function DUF1333 YP_003184900.1 KEGG: ade:Adeh_1698 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_003184901.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: gsu:GSU2001 DNA mismatch repair protein YP_003184902.1 PFAM: protein of unknown function DUF548; KEGG: afw:Anae109_3415 hypothetical protein YP_003184903.1 KEGG: gsu:GSU2000 tRNA delta(2)- isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003184904.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: pla:Plav_3124 RNA chaperone Hfq YP_003184906.1 KEGG: sfu:Sfum_3787 hypothetical protein YP_003184910.1 PFAM: transposase IS4 family protein; KEGG: dat:HRM2_33940 transposase family protein YP_003184911.1 PFAM: endodeoxyribonuclease RusA; KEGG: dno:DNO_0780 endodeoxyribonuclease RusA family protein YP_003184912.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: afr:AFE_1365 HNH endonuclease domain protein YP_003184913.1 KEGG: yen:YE1790 exodeoxyribonuclease X; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_003184915.1 PFAM: Sigma-70 region 4 type 2; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR YP_003184916.1 PFAM: peptidase C39 bacteriocin processing; KEGG: kpe:KPK_A0151 MceG YP_003184917.1 PFAM: secretion protein HlyD family protein; KEGG: yen:YE1200 HlyD family secretion protein YP_003184918.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swd:Swoo_4849 ABC transporter related YP_003184919.1 PFAM: protein of unknown function DUF214; KEGG: mms:mma_1065 macrolide ABC efllux protein YP_003184920.1 KEGG: hha:Hhal_0784 transposase, IS4 family protein YP_003184921.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein YP_003184922.1 PFAM: transposase IS4 family protein; KEGG: dat:HRM2_33940 transposase family protein YP_003184923.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: pen:PSEEN2864 IS256 family transposase YP_003184924.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: pen:PSEEN2864 IS256 family transposase YP_003184926.1 KEGG: dvm:DvMF_0669 hypothetical protein YP_003184928.1 PFAM: transposase IS3/IS911 family protein; KEGG: bvi:Bcep1808_7044 transposase IS3/IS911 family protein YP_003184929.1 PFAM: Integrase catalytic region; KEGG: nis:NIS_0744 transposase YP_003184931.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: sme:SMc03982 transposase ISRM3 YP_003184932.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpf:Rpic12D_4311 major facilitator superfamily MFS_1 YP_003184934.1 PFAM: YolD-like protein YP_003184935.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ppd:Ppro_2875 hexapaptide repeat-containing transferase YP_003184936.1 PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU0752 transporter, putative YP_003184937.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: pol:Bpro_5273 acyl-CoA dehydrogenase-like YP_003184938.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: pen:PSEEN2864 IS256 family transposase YP_003184939.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: sde:Sde_0095 sigma-24 (FecI-like) YP_003184941.1 KEGG: gur:Gura_2804 transposase, IS4 family protein YP_003184944.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: pen:PSEEN2864 IS256 family transposase YP_003184945.1 KEGG: sde:Sde_1704 glycosyl hydrolase family chitinase YP_003184946.1 KEGG: bvi:Bcep1808_6885 hypothetical protein YP_003184948.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vvy:VV1939 hypothetical protein YP_003184953.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: son:SO_0708 transposase mutator family protein YP_003184954.1 KEGG: pau:PA14_28895 hypothetical protein YP_003184955.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_0268 transposase IS4 family protein YP_003184956.1 PFAM: Integrase catalytic region; KEGG: bgl:bglu_3p0780 integrase YP_003184957.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein YP_003184958.1 catalyzes the formation of 2-oxoglutarate from isocitrate YP_003184959.1 PFAM: GerA spore germination protein; KEGG: hypothetical protein YP_003184962.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: hypothetical protein YP_003184963.1 PFAM: GerA spore germination protein; KEGG: hypothetical protein YP_003184964.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: eba:ebA3856 UDP-glucose 4-epimerase YP_003184965.1 PFAM: polysaccharide biosynthesis protein; KEGG: hypothetical protein YP_003184966.1 KEGG: pin:Ping_0439 hypothetical protein YP_003184967.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: nmu:Nmul_A0684 AAA ATPase, central region YP_003184968.1 PFAM: GTP-binding protein HSR1-related; KEGG: GTPBP5; GTP binding protein 5 (putative) ; K03979 GTP-binding protein YP_003184971.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: aeh:Mlg_0574 GTP-binding protein, HSR1- related YP_003184972.1 PFAM: Aluminium resistance family protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: hypothetical protein YP_003184973.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: atc:AGR_C_1620 hypothetical protein YP_003184974.1 KEGG: dat:HRM2_45740 GlnA2; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003184975.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: smd:Smed_4315 periplasmic binding protein/LacI transcriptional regulator YP_003184976.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: ypb:YPTS_3661 D-galactarate dehydratase/altronate hydrolase domain-containing protein YP_003184977.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: dde:Dde_0416 IolB protein YP_003184978.1 catalyzes the formation of D-tagaturonate from D-altronate YP_003184979.1 TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: eck:EC55989_4522 D-xylose transporter YP_003184980.1 KEGG: ppd:Ppro_1901 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24, S26A and S26B, conserved region YP_003184981.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: nma:NMA1921 hypothetical protein YP_003184982.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003184984.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions YP_003184986.1 KEGG: ppd:Ppro_3362 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003184989.1 PFAM: heat shock protein Hsp20; KEGG: bch:Bcen2424_6654 heat shock protein HSP20 YP_003184991.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: sat:SYN_02637 electron transfer flavoprotein alpha-subunit YP_003184992.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit YP_003184993.1 PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: sfu:Sfum_1401 transcriptional regulator, TetR family YP_003184994.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: sat:SYN_02638 iron-sulphur-binding reductase YP_003184995.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: acp:A2cp1_0388 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_003184996.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: gbm:Gbem_2127 acetyl-CoA acetyltransferase YP_003184997.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: gur:Gura_1593 acyl-CoA dehydrogenase domain- containing protein YP_003184998.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sfu:Sfum_0108 AMP-dependent synthetase and ligase YP_003184999.1 PFAM: thioesterase superfamily protein; KEGG: pfs:PFLU0257 putative thioesterase YP_003185000.1 KEGG: xfn:XfasM23_0474 ribonucleoside-diphosphate reductase, alpha subunit; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP- cone domain protein; Ribonucleotide reductase large subunit domain protein YP_003185001.1 PFAM: ribonucleotide reductase; KEGG: wsu:WS0420 ribonucleotide-diphosphate reductase subunit beta YP_003185002.1 KEGG: scl:sce7359 amino acid transporter YP_003185003.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: xac:XAC1602 hypothetical protein YP_003185004.1 KEGG: similar to predicted protein ; K01125 N- acetylglucosamine-1-phosphodiester alpha-N- acetylglucosaminidase YP_003185006.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ank:AnaeK_0056 protein of unknown function DUF6 transmembrane YP_003185007.1 PFAM: protein of unknown function DUF299; KEGG: scl:sce5851 hypothetical protein YP_003185008.1 PFAM: CBS domain containing protein; Helix-turn- helix type 11 domain protein; regulatory protein DeoR; SMART: CBS domain containing protein; KEGG: pin:Ping_0264 signal protein YP_003185009.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_003185010.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_003185011.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; NADP oxidoreductase coenzyme F420- dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mes:Meso_1079 6-phosphogluconate dehydrogenase, NAD-binding YP_003185012.1 TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: bpt:Bpet3605 hypothetical protein YP_003185013.1 PFAM: LmbE family protein; KEGG: bpt:Bpet3606 hypothetical protein YP_003185014.1 KEGG: rpc:RPC_0117 hypothetical protein YP_003185015.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ara:Arad_12465 regulatory protein, GntR YP_003185016.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr3819 metapyrocatechase YP_003185017.1 PFAM: amidohydrolase 2; KEGG: mxa:MXAN_0918 2-amino-3-carboxylmuconate-6- semialdehyde decarboxylase YP_003185018.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: rso:RS01664 4-oxalocrotonate tautomerase YP_003185019.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: avn:Avin_30600 4-oxalocrotonate decarboxylase; LapH YP_003185020.1 TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein; KEGG: bxe:Bxe_A3546 4-hydroxy-2-ketovalerate aldolase YP_003185021.1 catalyzes the formation of acetyl-CoA from acetalaldehyde YP_003185022.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: dar:Daro_2774 hydratase/decarboxylase YP_003185023.1 PFAM: Aldehyde Dehydrogenase; KEGG: mxa:MXAN_0921 2-aminomuconic semialdehyde dehydrogenase YP_003185024.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: rpt:Rpal_1859 3,4-dihydroxyphenylacetate 2,3- dioxygenase YP_003185025.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: gur:Gura_3644 regulatory protein, IclR YP_003185026.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate YP_003185027.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: nis:NIS_1256 hypothetical protein YP_003185028.1 KEGG: ppr:PBPRA2202 hypothetical protein YP_003185029.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rso:RSp0886 glutamine synthetase protein YP_003185030.1 PFAM: protein of unknown function DUF84; KEGG: saz:Sama_2774 NTPase YP_003185031.1 PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_C0878 hypothetical protein YP_003185032.1 KEGG: afr:AFE_0105 metal ion transporter, NRAMP family YP_003185033.1 TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: bme:BMEI0491 protein secretion chaperonin CsaA YP_003185034.1 KEGG: rfr:Rfer_2715 VCBS YP_003185036.1 TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-di aminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: aeh:Mlg_2197 UDP-N-acetylmuramoyl-tripeptide-- D-alanyl-D-alanine ligase YP_003185037.1 KEGG: xcv:XCV0246 D-alanyl-alanine synthetase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP- grasp YP_003185038.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region YP_003185039.1 TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type; KEGG: ade:Adeh_2728 asparaginyl-tRNA synthetase YP_003185040.1 KEGG: hhe:HH0822 membrane bound zinc metallopeptidase; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase YP_003185044.1 KEGG: dol:Dole_1163 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_003185046.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sfu:Sfum_2961 amidohydrolase YP_003185047.1 KEGG: afr:AFE_0893 translation initiation factor, putative, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_003185048.1 TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: afr:AFE_0365 methylthioadenosine phosphorylase YP_003185049.1 TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: ank:AnaeK_1023 DNA polymerase LigD, polymerase domain protein YP_003185050.1 PFAM: ATP dependent DNA ligase; KEGG: bch:Bcen2424_6876 ATP dependent DNA ligase YP_003185051.1 KEGG: acp:A2cp1_1021 Ku protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein YP_003185052.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; helicase c2; DEAD-like helicase; KEGG: glo:Glov_3621 helicase C2 YP_003185053.1 KEGG: vap:Vapar_0529 methyltransferase type 11 YP_003185054.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn- helix type 11 domain protein; biotin protein ligase domain protein; KEGG: mxa:MXAN_4152 BirA bifunctional protein YP_003185055.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: afw:Anae109_2353 tRNA cytidylyltransferase YP_003185056.1 PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_6195 glycosyl transferase, group 1 family protein YP_003185057.1 KEGG: cbc:CbuK_0303 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding YP_003185058.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: sml:Smlt3663 hypothetical protein YP_003185059.1 PFAM: transposase IS4 family protein; KEGG: rpd:RPD_1226 transposase, IS4 YP_003185060.1 TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: vco:VC0395_0063 hypothetical protein YP_003185061.1 PFAM: Bacitracin resistance protein BacA; KEGG: dal:Dalk_2390 undecaprenyl-diphosphatase YP_003185062.1 KEGG: pap:PSPA7_2010 hypothetical protein YP_003185063.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: gur:Gura_0624 hypothetical protein YP_003185064.1 PFAM: Protein of unknown function UPF0302 ; conserved hypothetical protein YP_003185065.1 KEGG: hypothetical protein YP_003185066.1 PFAM: Prephenate dehydrogenase; KEGG: mfa:Mfla_1074 prephenate dehydrogenase YP_003185067.1 KEGG: ade:Adeh_4059 3-deoxy-D-arabinoheptulosonate- 7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003185068.1 KEGG: sat:SYN_01941 tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_003185069.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_003185070.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mlo:mlr5070 N-(5'-phosphoribosyl)anthranilate isomerase YP_003185071.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: gme:Gmet_2494 indole-3-glycerol-phosphate synthase YP_003185072.1 KEGG: pla:Plav_3172 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_003185073.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: ank:AnaeK_0193 chorismate mutase YP_003185074.1 KEGG: gsu:GSU2025 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003185075.1 KEGG: ppd:Ppro_2028 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase YP_003185076.1 PFAM: peptidase M42 family protein; KEGG: ecs:ECs4824 putative fructose-specific phosphotransferase system protein FrvX YP_003185077.1 PFAM: peptidase M42 family protein; KEGG: pca:Pcar_1216 putative lyase/synthase YP_003185078.1 PFAM: peptidase M42 family protein; peptidase M20; KEGG: ppd:Ppro_1385 peptidase M42 family protein YP_003185079.1 KEGG: oan:Oant_1237 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003185082.1 PFAM: Peptidoglycan-binding lysin domain; Lytic transglycosylase catalytic; SMART: Peptidoglycan-binding LysM; KEGG: cja:CJA_2053 lytic murein transglycosylase, putative, lmt23B YP_003185083.1 KEGG: ajs:Ajs_3433 von Willebrand factor, type A YP_003185084.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; KEGG: pap:PSPA7_0621 regulatory protein NirQ YP_003185086.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: atc:AGR_C_4775 dihydrolipoamide succinyltransferase YP_003185087.1 PFAM: glycosyl transferase family 51; KEGG: ent:Ent638_3809 peptidoglycan synthetase YP_003185088.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: vvy:VV2140 GGDEF family protein YP_003185090.1 KEGG: mca:MCA1246 methyltransferase CheR, putative; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_003185091.1 PFAM: Patatin; KEGG: bte:BTH_I1983 patatin-like phospholipase YP_003185092.1 KEGG: ndkC-2; NDP kinase ; K00940 nucleoside- diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003185093.1 PFAM: Polyprenyl synthetase; KEGG: pfl:PFL_5330 octylprenyl diphosphate synthase YP_003185094.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: tau:Tola_0333 ubiquinone/menaquinone biosynthesis methyltransferase YP_003185097.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: mmw:Mmwyl1_0234 alcohol dehydrogenase YP_003185098.1 TIGRFAM: stage IV sporulation protein A; PFAM: Sporulation stage IV protein A YP_003185099.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: afw:Anae109_2523 glycine cleavage system H protein YP_003185100.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase ApbA/PanE domain protein; KEGG: ade:Adeh_0396 glycerol-3-phosphate dehydrogenase (NAD(P)+) YP_003185101.1 PFAM: protein of unknown function DUF205; KEGG: gme:Gmet_3020 acyl-phosphate glycerol-3- phosphate acyltransferase YP_003185102.1 TIGRFAM: ribosome-associated GTPase EngA; small GTP- binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: gsu:GSU2225 GTP-binding protein EngA YP_003185104.1 PFAM: RNA binding S1 domain protein; KEGG: bba:Bd1066 30S ribosomal protein S1 YP_003185105.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: gbm:Gbem_3974 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003185106.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: xcb:XC_1923 cytidylate kinase YP_003185108.1 PFAM: type IV pilus assembly PilZ; KEGG: gbm:Gbem_0376 type IV pilus assembly PilZ YP_003185110.1 TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan- binding domain 1 protein; KEGG: oan:Oant_0498 cell wall hydrolase SleB YP_003185112.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: sfu:Sfum_3265 Glu/Leu/Phe/Val dehydrogenase, C terminal YP_003185113.1 PFAM: Negative regulator of genetic competence YP_003185114.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hch:HCH_06458 transcriptional regulator YP_003185116.1 PFAM: UvrD/REP helicase; KEGG: btr:Btr_1576 DNA helicase II YP_003185117.1 PFAM: metallophosphoesterase; KEGG: mxa:MXAN_0344 metallophosphoesterase YP_003185118.1 PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: reu:Reut_A0587 UbiE/COQ5 methyltransferase YP_003185120.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: hch:HCH_01795 serine protease MucD precursor YP_003185122.1 KEGG: shn:Shewana3_2738 hypothetical protein YP_003185123.1 KEGG: hch:HCH_00950 hypothetical protein YP_003185125.1 PFAM: Silent information regulator protein Sir2; KEGG: rpf:Rpic12D_1166 silent information regulator protein Sir2 YP_003185126.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bgl:bglu_2g09450 transcriptional regulator, XRE family with cupin sensor domain YP_003185128.1 KEGG: sensory histidine protein kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003185129.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dvm:DvMF_0882 two component transcriptional regulator, winged helix family YP_003185130.1 PFAM: Sporulation lipoprotein YhcN/YlaJ-like YP_003185131.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gsu:GSU1403 ribosomal large subunit pseudouridine synthase B YP_003185132.1 PFAM: nucleoside recognition domain protein; KEGG: tgr:Tgr7_1060 nucleoside recognition domain- containing protein YP_003185133.1 PFAM: nucleoside recognition domain protein; KEGG: aeh:Mlg_1273 nucleoside recognition domain- containing protein YP_003185134.1 TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ; KEGG: rfr:Rfer_0173 hypothetical protein YP_003185136.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: pca:Pcar_1300 hypothetical protein YP_003185137.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: dal:Dalk_5224 chromosome segregation and condensation protein ScpA YP_003185138.1 PFAM: peptidase M50; KEGG: gbm:Gbem_2299 peptidase M50 YP_003185139.1 KEGG: mxa:MXAN_6241 hypothetical protein YP_003185142.1 TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein YP_003185143.1 TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein YP_003185144.1 TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein YP_003185145.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore. YP_003185146.1 KEGG: xcc:XCC1173 sigma-B negative effector; TIGRFAM: anti-sigma F factor; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003185147.1 TIGRFAM: anti-sigma F factor antagonist; anti-anti- sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sfu:Sfum_4033 anti-sigma-factor antagonist YP_003185148.1 PFAM: helix-turn-helix domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: helix-turn-helix domain protein; KEGG: hypothetical protein YP_003185149.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Penicillin-binding protein 5 domain protein; KEGG: sfu:Sfum_1305 serine-type D-Ala-D-Ala carboxypeptidase YP_003185150.1 KEGG: ank:AnaeK_0954 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: Phosphopentomutase domain protein; metalloenzyme domain protein YP_003185151.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: noc:Noc_2255 tyrosine recombinase XerD YP_003185153.1 PFAM: protein of unknown function DUF95 transmembrane YP_003185154.1 KEGG: geo:Geob_3320 hypothetical protein YP_003185155.1 PFAM: NUDIX hydrolase; KEGG: bbr:BB3297 hypothetical protein YP_003185156.1 PFAM: peptidase M20; KEGG: geo:Geob_2000 peptidase T-like protein YP_003185157.1 KEGG: afw:Anae109_1999 lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_003185158.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_003185159.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: pst:PSPTO_1247 molybdenum cofactor biosynthesis protein C YP_003185160.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; KEGG: mxa:MXAN_2564 molybdopterin converting factor, subunits 1/2 YP_003185161.1 PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: wsu:WS0692 hypothetical protein YP_003185162.1 KEGG: hha:Hhal_1487 hypothetical protein YP_003185164.1 PFAM: protein of unknown function DUF45; KEGG: reh:H16_A0518 hypothetical protein YP_003185165.1 KEGG: N-acyl-L-amino acid amidohydrolase; aminoacylase ; K01436 aminoacylase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003185166.1 PFAM: Chlorite dismutase YP_003185168.1 KEGG: avn:Avin_27980 chemotaxis response regulator; CheB; TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver YP_003185169.1 KEGG: ank:AnaeK_0414 peptidase S1 and S6 chymotrypsin/Hap; TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; SMART: PDZ/DHR/GLGF domain protein YP_003185170.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: sfu:Sfum_3096 DNA repair protein RecN YP_003185171.1 PFAM: ATP-NAD/AcoX kinase; KEGG: pca:Pcar_2327 ATP-NAD kinase YP_003185173.1 KEGG: glo:Glov_2704 hemolysin A; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein YP_003185174.1 KEGG: bra:BRADO0697 hypothetical protein YP_003185175.1 PFAM: Polyprenyl synthetase; KEGG: ppd:Ppro_2404 polyprenyl synthetase YP_003185176.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: gsu:GSU1766 exodeoxyribonuclease VII small subunit YP_003185177.1 KEGG: ypi:YpsIP31758_1193 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_003185178.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: vap:Vapar_2159 methylenetetrahydrofolate dehydrogenase (NADP(+)) YP_003185179.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pla:Plav_2522 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003185180.1 PFAM: peptidase M22 glycoprotease; KEGG: sgl:SG0254 O-sialoglycoprotein endopeptidase YP_003185181.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mxa:MXAN_4761 transcription antitermination factor NusB YP_003185184.1 PFAM: protein of unknown function DUF322 YP_003185185.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: glo:Glov_1598 acetyl-CoA carboxylase, biotin carboxylase YP_003185186.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: scl:sce3923 acetyl-CoA carboxylase biotin carboxyl carrier protein YP_003185187.1 KEGG: hypothetical protein YP_003185190.1 TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; KEGG: hypothetical protein LOC100204036 YP_003185191.1 TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD YP_003185192.1 TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein YP_003185193.1 PFAM: Sporulation stage III protein AB YP_003185194.1 TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: Os07g0187400; hypothetical protein YP_003185196.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; KEGG: dma:DMR_23980 elongation factor P YP_003185197.1 KEGG: ade:Adeh_0189 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_003185198.1 PFAM: Phosphoglycerate mutase; KEGG: bav:BAV0921 phosphoglycerate mutase 2 YP_003185199.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_003185200.1 PFAM: glycine cleavage system P-protein; KEGG: glo:Glov_2672 glycine dehydrogenase subunit 1 YP_003185201.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: ade:Adeh_1245 glycine cleavage system aminomethyltransferase T YP_003185202.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: scl:sce0545 helicase, putative YP_003185204.1 KEGG: afw:Anae109_3709 DNA replication protein-like protein YP_003185205.1 PFAM: shikimate kinase; KEGG: dda:Dd703_2922 shikimate kinase YP_003185209.1 KEGG: vei:Veis_2827 Tfp pilus assembly protein YP_003185210.1 KEGG: pmy:Pmen_2923 general secretion pathway protein G YP_003185211.1 PFAM: Type II secretion system F domain; KEGG: neu:NE1256 type II secretion system protein YP_003185212.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: eum:ECUMN_3443 general secretion pathway protein E YP_003185213.1 KEGG: aeh:Mlg_1159 Mov34/MPN/PAD-1 family protein YP_003185214.1 TIGRFAM: GTP-binding protein Obg/CgtA; small GTP- binding protein; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; KEGG: hypothetical protein YP_003185216.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: nis:NIS_1233 50S ribosomal protein L27 YP_003185217.1 PFAM: protein of unknown function DUF464 YP_003185218.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: mfa:Mfla_2219 50S ribosomal protein L21P YP_003185219.1 PFAM: peptidase M50; KEGG: sme:SM_b20925 hypothetical protein YP_003185220.1 PFAM: Peptidase M23; KEGG: ade:Adeh_1347 peptidase M23B YP_003185221.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nam:NAMH_1151 septum site-determining protein MinD YP_003185222.1 PFAM: Septum formation inhibitor MinC; KEGG: sfu:Sfum_1280 septum site-determining protein MinC YP_003185223.1 TIGRFAM: rod shape-determining protein MreD; KEGG: ppd:Ppro_2546 rod shape-determining protein MreD, putative YP_003185224.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: geo:Geob_3479 rod shape-determining protein MreC YP_003185225.1 KEGG: ade:Adeh_0112 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; SMART: actin/actin family protein YP_003185226.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: gbm:Gbem_3784 DNA repair protein RadC YP_003185228.1 PFAM: phosphoesterase; KEGG: ara:Arad_3908 phospholipase C YP_003185229.1 PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: dps:DP1968 hypothetical protein YP_003185230.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: gme:Gmet_0413 UDP-N-acetylmuramate--L-alanine ligase YP_003185231.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: sfu:Sfum_1671 FolC bifunctional protein YP_003185232.1 TIGRFAM: valyl-tRNA synthetase; KEGG: pca:Pcar_2315 valyl-tRNA synthetase YP_003185235.1 KEGG: hypothetical protein YP_003185236.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: tgr:Tgr7_2421 glutamate-1-semialdehyde-2,1- aminomutase YP_003185237.1 PFAM: delta-aminolevulinic acid dehydratase; KEGG: pca:Pcar_3061 delta-aminolevulinic acid dehydratase YP_003185238.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: dvm:DvMF_2767 uroporphyrin-III C- methyltransferase YP_003185239.1 KEGG: sfu:Sfum_3202 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_003185240.1 PFAM: cytochrome c assembly protein; KEGG: pca:Pcar_3065 cytochrome c biogenesis protein YP_003185241.1 KEGG: pca:Pcar_3064 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_003185242.1 TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: afw:Anae109_2672 GTP-binding protein HSR1- related YP_003185243.1 KEGG: sat:SYN_02787 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase YP_003185244.1 KEGG: gme:Gmet_3214 Lon-A peptidase; TIGRFAM: ATP-dependent protease LonB; PFAM: AAA ATPase central domain protein; peptidase S16 lon domain protein; magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_003185245.1 KEGG: sfu:Sfum_0099 ATP-dependent protease ATP- binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase YP_003185246.1 KEGG: afw:Anae109_3421 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003185247.1 TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein; peptidylprolyl isomerase FKBP-type; KEGG: hypothetical protein YP_003185248.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: pla:Plav_3581 putative deoxyribonucleotide triphosphate pyrophosphatase YP_003185249.1 KEGG: glo:Glov_2832 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003185250.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: afw:Anae109_4143 MarR family transcriptional regulator YP_003185251.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: gur:Gura_3313 acyl-CoA dehydrogenase domain- containing protein YP_003185252.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB4678 CaiB/BaiF family protein YP_003185254.1 KEGG: spe:Spro_0691 hypothetical protein YP_003185255.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: bba:Bd1826 LuxR family transcriptional regulator YP_003185256.1 PFAM: aminotransferase class I and II; KEGG: ypi:YpsIP31758_1307 aminotransferase, classes I and II YP_003185257.1 PFAM: Radical SAM domain protein; KEGG: tau:Tola_1404 radical SAM domain protein YP_003185258.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ppd:Ppro_1196 GntR family transcriptional regulator YP_003185259.1 PFAM: major facilitator superfamily MFS_1; KEGG: dma:DMR_27920 putative drug resistance transporter YP_003185260.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mms:mma_3510 hypothetical protein YP_003185262.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_003185263.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_003185264.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; PFAM: Fumarate reductase respiratory complex; KEGG: scl:sce8307 succinate dehydrogenase YP_003185265.1 KEGG: pca:Pcar_0553 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein YP_003185267.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: gsu:GSU1219 glutamyl-tRNA synthetase YP_003185269.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: scl:sce8915 histidinol-phosphate transaminase YP_003185270.1 PFAM: protein of unknown function DUF502; KEGG: aeh:Mlg_0268 hypothetical protein YP_003185271.1 TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: mca:MCA0142 calcium/proton exchanger YP_003185274.1 PFAM: protein of unknown function DUF72; KEGG: bmj:BMULJ_03922 hypothetical protein YP_003185276.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: hypothetical protein YP_003185277.1 PFAM: glycosyl transferase family 2; GtrA family protein; KEGG: sat:SYN_02391 glycosyltransferase involved in cell wall biogenesis YP_003185278.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gur:Gura_0588 2-hydroxy-3-oxopropionate reductase YP_003185279.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bpr:GBP346_A1790 transcriptional regulator, MarR family YP_003185280.1 PFAM: SNARE associated Golgi protein; KEGG: bgl:bglu_2p0890 DedA family protein YP_003185282.1 KEGG: pla:Plav_1094 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase YP_003185283.1 PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: dol:Dole_2328 phospholipase D/transphosphatidylase YP_003185285.1 PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A4701 small multidrug resistance protein YP_003185286.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mxa:MXAN_3382 cation efflux family protein YP_003185287.1 KEGG: pca:Pcar_1852 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit YP_003185288.1 PFAM: ATP-cone domain protein; KEGG: dat:HRM2_31280 hypothetical protein YP_003185289.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bja:blr1894 phosphotransferase YP_003185290.1 PFAM: beta-lactamase domain protein; KEGG: cti:RALTA_B1427 putative hydrolase; NUDIX (NUcleoside DIphosphate) hydrolase motif; metallo- hydrolase/oxidoreductase YP_003185291.1 KEGG: scl:sce0423 hypothetical protein YP_003185292.1 PFAM: glycosyl transferase family 2; KEGG: pol:Bpro_5439 glycosyl transferase, family 2 YP_003185293.1 KEGG: aha:AHA_0987 hypothetical protein YP_003185294.1 KEGG: pca:Pcar_3074 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; proline racemase YP_003185296.1 KEGG: mxa:MXAN_6555 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_003185297.1 KEGG: scl:sce4298 ABC-type oligopeptide transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003185298.1 KEGG: scl:sce4299 peptide ABC transporter, ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003185299.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL110515 putative permease component of ABC transporter YP_003185300.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4301 peptide ABC transporter, permease protein YP_003185301.1 PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce4302 ABC-type dipeptide transport system, periplasmic component YP_003185303.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: xfn:XfasM23_2082 4Fe-4S ferredoxin iron- sulfur binding domain-containing protein YP_003185304.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: xcv:XCV4439 putative DNA-binding protein YP_003185305.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: pen:PSEEN2864 IS256 family transposase YP_003185306.1 KEGG: dde:Dde_2386 phosphate ABC transporter permease; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003185307.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: hypothetical protein YP_003185309.1 PFAM: NLP/P60 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: gbm:Gbem_0896 NLP/P60 protein YP_003185310.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pen:PSEEN2748 oxidoreductase YP_003185311.1 PFAM: Monogalactosyldiacylglycerol synthase; KEGG: vap:Vapar_4986 monogalactosyldiacylglycerol synthase YP_003185313.1 PFAM: polysaccharide deacetylase; KEGG: bph:Bphy_4706 polysaccharide deacetylase YP_003185314.1 PFAM: Monogalactosyldiacylglycerol synthase; KEGG: vap:Vapar_4986 monogalactosyldiacylglycerol synthase YP_003185315.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afr:AFE_1941 phosphate ABC transporter, permease protein, putative YP_003185316.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afr:AFE_1940 phosphate ABC transporter, permease protein PstC YP_003185317.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: afr:AFE_1939 phosphate ABC transporter, periplasmic phosphate-binding protein PstS YP_003185318.1 PFAM: alpha/beta hydrolase fold; KEGG: mxa:MXAN_3529 alpha/beta fold family hydrolase YP_003185319.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: mxa:MXAN_3528 2-succinyl-6-hydroxy-2,4- cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YP_003185320.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: psp:PSPPH_2904 salicylate biosynthesis isochorismate synthase YP_003185321.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rpt:Rpal_0814 AMP-dependent synthetase and ligase YP_003185322.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: hso:HS_0562 naphthoate synthase YP_003185323.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate YP_003185324.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: pca:Pcar_1840 formate dehydrogenase accessory protein YP_003185325.1 PFAM: protein of unknown function DUF1641; KEGG: esa:ESA_02946 hypothetical protein YP_003185326.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; molydopterin dinucleotide-binding region; KEGG: xcc:XCC2664 formate dehydrogenase related protein YP_003185327.1 KEGG: sfu:Sfum_2547 protein of unknown function DUF255 YP_003185328.1 PFAM: protein of unknown function DUF255; KEGG: spermatogenesis associated 20 YP_003185329.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmy:Pmen_4326 GCN5-related N- acetyltransferase YP_003185330.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccv:CCV52592_0884 transporter YP_003185331.1 PFAM: protein of unknown function DUF34; KEGG: lch:Lcho_1604 hypothetical protein YP_003185332.1 PFAM: TENA/THI-4 domain protein; KEGG: abb:ABBFA_000191 Thiaminase-2(Thiaminase II) (transcriptional activatortenA) YP_003185333.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; protein of unknown function UPF0031; KEGG: pca:Pcar_2235 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_003185334.1 KEGG: dps:DP0499 hydroxyethylthiazole kinase; TIGRFAM: hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_003185335.1 KEGG: glo:Glov_2763 phosphomethylpyrimidine kinase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003185336.1 KEGG: spe:Spro_1677 cysteine/glutathione ABC transporter membrane/ATP-binding component; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase YP_003185337.1 KEGG: afr:AFE_1388 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003185338.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: dol:Dole_2650 cytochrome d ubiquinol oxidase, subunit II YP_003185339.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gur:Gura_2163 cytochrome bd ubiquinol oxidase, subunit I YP_003185340.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_5401 probably multidrug resistance membrane translocase YP_003185341.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: shn:Shewana3_2937 MarR family transcriptional regulator YP_003185342.1 PFAM: protein of unknown function DUF124; KEGG: hypothetical protein YP_003185343.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcn:Bcen_1155 ABC transporter related YP_003185344.1 PFAM: transport system permease protein; KEGG: rpb:RPB_0167 transport system permease protein YP_003185345.1 PFAM: periplasmic binding protein; KEGG: pca:Pcar_0464 ABC-type transport system, periplasmic component YP_003185347.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: afw:Anae109_3587 ATP--cobalamin adenosyltransferase YP_003185348.1 KEGG: pau:PA14_47670 nicotinate-nucleotide-- dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazolep hosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003185349.1 PFAM: helix-turn-helix HxlR type; KEGG: mxa:MXAN_7066 putative transcriptional regulator YP_003185350.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: dps:DP0165 6-pyruvoyl tetrahydropterin synthase YP_003185351.1 PFAM: Radical SAM domain protein; KEGG: sfu:Sfum_1985 radical SAM domain protein YP_003185352.1 TIGRFAM: haloacid dehalogenase, type II; HAD- superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: acp:A2cp1_3955 haloacid dehalogenase, type II YP_003185353.1 PFAM: small acid-soluble spore protein alpha/beta type YP_003185354.1 PFAM: Ppx/GppA phosphatase; KEGG: gsu:GSU2559 exopolyphosphatase, putative YP_003185355.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: afw:Anae109_0015 prolipoprotein diacylglyceryl transferase YP_003185357.1 KEGG: dds:Ddes_1078 homoserine O- succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_003185359.1 PFAM: phosphate transporter; KEGG: pap:PSPA7_5952 phosphate transporter YP_003185360.1 KEGG: nis:NIS_0255 aspartate alpha-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_003185361.1 KEGG: hypothetical protein YP_003185362.1 PFAM: Heavy metal transport/detoxification protein; KEGG: similar to CLAP1; K01533 Cu2+-exporting ATPase YP_003185363.1 PFAM: GerA spore germination protein; KEGG: hypothetical protein YP_003185364.1 TIGRFAM: germination protein, Ger(x)C family YP_003185365.1 PFAM: Spore germination protein; KEGG: saz:Sama_3458 inner membrane protein YjeH YP_003185366.1 PFAM: protein of unknown function DUF1284; KEGG: avi:Avi_1083 hypothetical protein YP_003185367.1 KEGG: sensory histidine protein kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003185369.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: apl:APL_1191 NADPH dehydrogenase YP_003185370.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dma:DMR_45890 two-component sensor histidine kinase YP_003185371.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bbt:BBta_3078 two component transcriptional regulator YP_003185372.1 KEGG: neu:NE2151 hypothetical protein YP_003185373.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_0054 GCN5-related N- acetyltransferase YP_003185374.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pfs:PFLU1122 hypothetical protein YP_003185375.1 PFAM: protein of unknown function DUF34; KEGG: pca:Pcar_2677 hypothetical protein YP_003185376.1 PFAM: protein of unknown function DUF633; KEGG: ppw:PputW619_2868 hypothetical protein YP_003185377.1 PFAM: protein of unknown function DUF218; KEGG: spq:SPAB_00125 hypothetical protein YP_003185378.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; Bacterio- opsin activator HTH domain protein; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: ank:AnaeK_0758 RNA polymerase, sigma 70 subunit, RpoD family YP_003185379.1 KEGG: tbd:Tbd_2387 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003185380.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: ank:AnaeK_2557 DNA repair protein RecO YP_003185382.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: geo:Geob_2155 GTP-binding protein Era YP_003185383.1 PFAM: diacylglycerol kinase; KEGG: gbm:Gbem_0999 diacylglycerol kinase YP_003185384.1 PFAM: protein of unknown function UPF0054; KEGG: scl:sce0028 hypothetical protein YP_003185385.1 KEGG: pca:Pcar_1232 HD superfamily hydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003185386.1 PFAM: PhoH family protein; KEGG: mxa:MXAN_4738 PhoH family protein YP_003185387.1 TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD YP_003185389.1 PFAM: Protein of unknown function YOR215C, mitochondrial; KEGG: afw:Anae109_0760 GatB/YqeY domain-containing protein YP_003185390.1 TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: glo:Glov_1016 30S ribosomal protein S21 YP_003185391.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: vvy:VVA0097 hypothetical protein YP_003185392.1 KEGG: mxa:MXAN_5719 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; NUDIX hydrolase YP_003185393.1 KEGG: sat:SYN_00797 tRNA 2-methylthioadenosine synthase -like protein; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003185394.1 PFAM: protein of unknown function DUF558; KEGG: gbm:Gbem_0240 protein of unknown function DUF558 YP_003185395.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; O-methyltransferase family 3; putative RNA methylase; KEGG: dat:HRM2_11510 PrmA2 YP_003185396.1 KEGG: pca:Pcar_0106 chaperone; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003185397.1 TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: geo:Geob_1107 chaperone protein DnaK YP_003185398.1 PFAM: GrpE protein; KEGG: hap:HAPS_1647 heat shock protein (HSP-70 cofactor) YP_003185399.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: sfu:Sfum_1034 heat-inducible transcription repressor HrcA YP_003185400.1 KEGG: geo:Geob_1104 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003185401.1 TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; KEGG: ank:AnaeK_2246 GTP-binding protein LepA YP_003185402.1 KEGG: gsu:GSU2959 hypothetical protein YP_003185403.1 KEGG: mucin-associated surface protein (MASP) YP_003185404.1 PFAM: Lytic transglycosylase catalytic; Transglycosylase domain protein; KEGG: abb:ABBFA_000819 transglycosylase SLT domain protein YP_003185405.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination YP_003185406.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: gme:Gmet_2297 30S ribosomal protein S20 YP_003185408.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: psa:PST_3770 DNA polymerase III subunit delta YP_003185409.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cla:Cla_0908 NADH dehydrogenase YP_003185410.1 TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: rme:Rmet_1043 DNA internalization-related competence protein ComEC/Rec2 YP_003185411.1 KEGG: tgr:Tgr7_1548 competence protein ComEA helix- hairpin-helix repeat protein; TIGRFAM: competence protein ComEA helix-hairpin- helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin- helix motif; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003185412.1 involved in manganese homeostasis; activates the transcription of the mntABCD operon YP_003185413.1 PFAM: Methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; Methyltransferase type 12; KEGG: ara:Arad_15034 S-adenosylmethionine-dependent methyltransferase protein YP_003185414.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: sat:SYN_01339 iojap superfamily protein YP_003185415.1 PFAM: metal-dependent phosphohydrolase HD sub domain YP_003185416.1 KEGG: sfu:Sfum_3645 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003185417.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: dps:DP3012 shikimate 5-dehydrogenase YP_003185418.1 TIGRFAM: ribosome biogenesis GTPase YqeH; KEGG: hypothetical protein YP_003185419.1 TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Protein of unknown function DUF2010; KEGG: similar to haloacid dehalogenase-like hydrolase domain containing 3 YP_003185421.1 TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ilo:IL0745 DNA-directed RNA polymerase sigma 38 subunit YP_003185422.1 PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: mxa:MXAN_7250 hypothetical protein YP_003185424.1 PFAM: aminodeoxychorismate lyase; KEGG: glo:Glov_2459 aminodeoxychorismate lyase YP_003185425.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: sat:SYN_01734 4-amino-4-deoxychorismate lyase YP_003185426.1 PFAM: protein of unknown function DUF965 YP_003185427.1 KEGG: gsu:GSU0148 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD YP_003185428.1 PFAM: protein of unknown function UPF0118; KEGG: dno:DNO_0651 hypothetical protein YP_003185430.1 PFAM: aminotransferase class V; KEGG: sat:SYN_01251 cysteine desulfurase / selenocysteine lyase YP_003185431.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sat:SYN_03008 rrf2 family protein YP_003185432.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pca:Pcar_2328 recombination factor protein RarA YP_003185434.1 KEGG: hha:Hhal_0091 protein tyrosine phosphatase; TIGRFAM: arsenate reductase (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003185435.1 PFAM: transposase IS4 family protein; KEGG: dat:HRM2_33940 transposase family protein YP_003185436.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_3898 AMP-dependent synthetase and ligase YP_003185438.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: pca:Pcar_1040 aspartyl-tRNA synthetase YP_003185439.1 KEGG: gbm:Gbem_3096 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003185441.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate YP_003185442.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bvi:Bcep1808_3943 sodium/calcium exchanger membrane region YP_003185443.1 KEGG: scl:sce7370 hypothetical protein YP_003185444.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6475 ABC transporter, ATP-binding protein YP_003185445.1 KEGG: scl:sce7372 hypothetical protein YP_003185446.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppw:PputW619_0394 major facilitator transporter YP_003185447.1 KEGG: dol:Dole_0260 beta-lactamase domain- containing protein YP_003185448.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avi:Avi_7347 ABC transporter membrane spanning protein (sugar) YP_003185449.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1924 sugar ABC transporter, permease protein YP_003185450.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpn:KPN_04678 putative sn-glycerol-3- phosphate-binding periplasmic protein YP_003185451.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mxa:MXAN_1610 Rieske family iron-sulfur cluster-binding protein YP_003185452.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dal:Dalk_3794 enoyl-CoA hydratase/isomerase YP_003185453.1 PFAM: carboxyl transferase; KEGG: mxa:MXAN_3759 carboxyl transferase domain- containing protein YP_003185454.1 PFAM: pyruvate carboxyltransferase; KEGG: eba:ebA4662 3-hydroxymethylglutaryl-CoA or malyl-CoA lyase YP_003185455.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: scl:sce3699 hypothetical protein YP_003185456.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dat:HRM2_10010 Acd3 YP_003185457.1 KEGG: pag:PLES_33221 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003185458.1 KEGG: mxa:MXAN_3789 3-oxoacid CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_003185459.1 KEGG: gme:Gmet_3296 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_003185461.1 KEGG: hypothetical protein YP_003185462.1 KEGG: aeh:Mlg_0678 GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I YP_003185463.1 PFAM: Fmu (Sun) domain protein; KEGG: kpe:KPK_1939 rRNA (cytosine-C(5)-)- methyltransferase RsmF YP_003185464.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: ade:Adeh_1667 3-hydroxyacyl-CoA dehydrogenase YP_003185466.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003185468.1 PFAM: major facilitator superfamily MFS_1; KEGG: cps:CPS_3697 sugar:cation symporter family protein YP_003185469.1 PFAM: LmbE family protein; KEGG: eum:ECUMN_0404 hypothetical protein YP_003185470.1 PFAM: aldo/keto reductase; KEGG: mxa:MXAN_6482 aldo/keto reductase family oxidoreductase YP_003185471.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: hha:Hhal_0242 molybdenum cofactor synthesis domain-containing protein YP_003185472.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: glo:Glov_0507 UTP-glucose-1-phosphate uridylyltransferase YP_003185473.1 PFAM: NLP/P60 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: gme:Gmet_1169 NLP/P60:peptidoglycan-binding LysM YP_003185475.1 PFAM: UvrD/REP helicase; KEGG: ade:Adeh_2512 UvrD/REP helicase YP_003185476.1 KEGG: ade:Adeh_2513 ATP-dependent nuclease subunit B-like YP_003185477.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: pmr:PMI0164 MFS-family transporter YP_003185478.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ppf:Pput_0406 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003185479.1 PFAM: amino acid permease-associated region; KEGG: bgl:bglu_2g15220 amino acid permease- associated region YP_003185480.1 KEGG: gur:Gura_0119 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_003185481.1 KEGG: dal:Dalk_1286 PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; PAS domain containing protein YP_003185482.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: fph:Fphi_1896 tRNA-dihydrouridine synthase YP_003185483.1 PFAM: TM2 domain containing protein; KEGG: cff:CFF8240_1715 TM2 YP_003185484.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bbt:BBta_0953 putative D-alanyl-D-alanine carboxypeptidase YP_003185485.1 PFAM: iron dependent repressor; FeoA family protein; regulatory protein MarR; SMART: iron dependent repressor; regulatory protein Crp; KEGG: tcx:Tcr_0904 iron dependent repressor YP_003185486.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cvi:CV_2788 isomerase YP_003185487.1 PFAM: protein of unknown function DUF1094 YP_003185488.1 KEGG: scl:sce8628 putative uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_003185489.1 KEGG: scl:sce1682 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase YP_003185490.1 KEGG: gur:Gura_0144 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase YP_003185491.1 KEGG: gur:Gura_3425 BNR repeat-containing glycosyl hydrolase YP_003185492.1 PFAM: protein of unknown function DUF81; KEGG: avi:Avi_2642 hypothetical protein YP_003185493.1 KEGG: azo:azo1490 putative signaling protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003185495.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: ade:Adeh_0179 D-tyrosyl-tRNA deacylase YP_003185496.1 KEGG: gbm:Gbem_3211 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003185497.1 TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: ypb:YPTS_1034 adenine phosphoribosyltransferase YP_003185498.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: ppd:Ppro_1795 single-stranded-DNA-specific exonuclease RecJ YP_003185499.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bgl:bglu_2g09590 cation diffusion facilitator family transporter YP_003185500.1 TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: hit:NTHI0345 preprotein translocase subunit SecF YP_003185501.1 TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; KEGG: afr:AFE_2057 protein-export membrane protein SecD YP_003185503.1 TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: hypothetical protein YP_003185504.1 KEGG: xop:PXO_01741 putative signal protein with CHASE3 and GGDEF domains; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein YP_003185506.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: nam:NAMH_1479 preprotein translocase, YajC subunit YP_003185507.1 KEGG: geo:Geob_3451 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase YP_003185508.1 TIGRFAM:S-adenosylmethionine/tRNA- ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; KEGG: glo:Glov_2012 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_003185510.1 Heat shock-induced YP_003185511.1 KEGG: bpt:Bpet0901 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003185512.1 KEGG: aeh:Mlg_2494 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003185513.1 KEGG: avn:Avin_36710 crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003185515.1 PFAM: protein of unknown function DUF28; KEGG: dal:Dalk_2958 protein of unknown function DUF28 YP_003185516.1 KEGG: gsu:GSU0652 NAD synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; tRNA methyl transferase-like; Queuosine synthesis-like YP_003185517.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gbm:Gbem_3422 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003185518.1 PFAM: aminoglycoside phosphotransferase; KEGG: ank:AnaeK_1388 serine/threonine protein kinase YP_003185519.1 PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: dma:DMR_14830 hypothetical protein YP_003185521.1 KEGG: dps:DP2869 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA- binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003185522.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: sat:SYN_00304 multimodular transpeptidase- transglycosylase YP_003185523.1 KEGG: gme:Gmet_2974 MutS 2 protein; TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2 YP_003185524.1 PFAM: membrane protein of unknown function; KEGG: sfu:Sfum_0487 membrane protein of unknown function YP_003185525.1 PFAM: Colicin V production protein; KEGG: mpt:Mpe_A2152 colicin V production protein YP_003185526.1 KEGG: ppd:Ppro_3315 hypothetical protein YP_003185527.1 TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: tgr:Tgr7_1455 phenylalanyl-tRNA synthetase, beta subunit YP_003185528.1 KEGG: gbm:Gbem_1994 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase, class IIc-like; aminoacyl tRNA synthetase class II domain protein YP_003185530.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: tbd:Tbd_2662 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_003185531.1 KEGG: hch:HCH_04603 phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003185532.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate YP_003185533.1 KEGG: gme:Gmet_0938 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_003185534.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: dar:Daro_1759 phosphoenolpyruvate carboxylase YP_003185535.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: afw:Anae109_4464 methyl-accepting chemotaxis sensory transducer YP_003185536.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: hap:HAPS_0960 phosphotransferase system, phosphocarrier protein HPr YP_003185537.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ecr:ECIAI1_1343 putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter YP_003185539.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: tau:Tola_0213 malate dehydrogenase (oxaloacetate-decarboxylating) YP_003185540.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_003185541.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; KEGG: avi:Avi_4121 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex YP_003185542.1 KEGG: sfu:Sfum_3547 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region YP_003185543.1 KEGG: mxa:MXAN_5370 putative lipoprotein YP_003185544.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: dal:Dalk_1548 ATPase associated with various cellular activities AAA_3 YP_003185545.1 PFAM: protein of unknown function DUF58; KEGG: scl:sce4442 hypothetical protein YP_003185546.1 KEGG: GK24882 gene product from transcript GK24882- RA YP_003185547.1 KEGG: bja:bll5145 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_003185548.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: pag:PLES_30411 putative 2-hydroxyacid dehydrogenase YP_003185550.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mmw:Mmwyl1_0168 hypothetical protein YP_003185551.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rlt:Rleg2_4779 oxidoreductase domain protein YP_003185552.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: ecz:ECS88_1457 putative oxidoreductase, NADH- binding YP_003185553.1 PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: ara:Arad_0117 hypothetical protein YP_003185554.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sml:Smlt1193 putative xylose isomerase family protein YP_003185555.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: csa:Csal_0292 4-hydroxyphenylpyruvate dioxygenase YP_003185557.1 KEGG: afe:Lferr_1409 hypothetical protein YP_003185558.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: afw:Anae109_4325 tRNA/rRNA methyltransferase (SpoU) YP_003185559.1 KEGG: dma:DMR_10890 hypothetical membrane protein YP_003185560.1 PFAM: GCN5-related N-acetyltransferase; KEGG: har:HEAR0849 putative acetyltransferase YP_003185561.1 TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PB00090 proline iminopeptidase protein YP_003185562.1 PFAM: amino acid permease-associated region; KEGG: pag:PLES_59061 putative transporter YP_003185563.1 PFAM: manganese containing catalase; KEGG: sml:Smlt2537 putative managnese containing catalase YP_003185566.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: hypothetical protein LOC100252740 YP_003185567.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cvi:CV_2030 tRNA methyltransferase YP_003185568.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: ccv:CCV52592_0347 50S ribosomal protein L20 YP_003185569.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: dps:DP1426 50S ribosomal protein L35 YP_003185570.1 TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; KEGG: nmu:Nmul_A0488 translation initiation factor IF-3 YP_003185571.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: hha:Hhal_0342 protein of unknown function DUF395, YeeE/YedE YP_003185572.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: expressed hypothetical protein YP_003185573.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: tgr:Tgr7_1450 threonyl-tRNA synthetase YP_003185575.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: prw:PsycPRwf_2081 oligoendopeptidase F YP_003185576.1 PFAM: Aldose 1-epimerase; KEGG: pla:Plav_1886 aldose 1-epimerase YP_003185577.1 TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: scl:sce9296 xylulokinase YP_003185578.1 KEGG: Os07g0669100; hypothetical protein ; K01805 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_003185579.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: aci:ACIAD0233 MFS family transporter YP_003185580.1 PFAM: metallophosphoesterase; KEGG: ank:AnaeK_1204 metallophosphoesterase YP_003185581.1 KEGG: mxa:MXAN_5957 hypothetical protein YP_003185582.1 PFAM: thioesterase superfamily protein; KEGG: pca:Pcar_1492 putative thioesterase YP_003185583.1 KEGG: hypothetical protein YP_003185584.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003185586.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ank:AnaeK_0058 uracil-xanthine permease YP_003185587.1 KEGG: afr:AFE_0921 hypothetical protein YP_003185588.1 KEGG: afe:Lferr_0157 natural resistance-associated macrophage protein YP_003185589.1 KEGG: afe:Lferr_0157 natural resistance-associated macrophage protein YP_003185590.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF1232; SMART: helix-turn-helix domain protein; KEGG: scl:sce0455 Cro/CI family transcriptional regulator YP_003185591.1 KEGG: similar to rCG36147 YP_003185592.1 PFAM: protein of unknown function DUF1003; KEGG: ara:Arad_4862 hypothetical protein YP_003185593.1 KEGG: sbl:Sbal_3138 hypothetical protein YP_003185594.1 PFAM: protein of unknown function DUF1540 YP_003185595.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pca:Pcar_2806 cold shock proteins YP_003185597.1 KEGG: hypothetical protein YP_003185598.1 PFAM: aldo/keto reductase; KEGG: ret:RHE_PB00074 aldoketo reductase protein YP_003185599.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: pag:PLES_30261 ArsB protein YP_003185600.1 PFAM: protein of unknown function DUF1037; KEGG: lch:Lcho_3205 hypothetical protein YP_003185602.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: Na+/glucose co-transporter YP_003185603.1 PFAM: aldo/keto reductase; KEGG: dda:Dd703_1709 aldo/keto reductase YP_003185604.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rlg:Rleg_4979 xylose isomerase domain protein TIM barrel YP_003185606.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: pcr:Pcryo_0140 transcriptional coactivator/pterin dehydratase YP_003185607.1 PFAM: NUDIX hydrolase; KEGG: cja:CJA_0301 hydrolase, NUDIX family YP_003185609.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_003185610.1 PFAM: Rhomboid family protein; KEGG: sun:SUN_2072 hypothetical protein YP_003185611.1 PFAM: glycosyl transferase group 1; KEGG: ppd:Ppro_2463 glycosyl transferase, group 1 YP_003185613.1 PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_2201 protein of unknown function DUF214 YP_003185614.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_4199 putative macrolide efflux ABC transporter, ATP-binding protein YP_003185615.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_5985 RND family efflux transporter MFP subunit YP_003185617.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mms:mma_1652 inosine-5'-monophosphate dehydrogenase YP_003185618.1 PFAM: small acid-soluble spore protein alpha/beta type YP_003185619.1 KEGG: bba:Bd0562 hypothetical protein; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase YP_003185620.1 PFAM: protein of unknown function DUF204; KEGG: dde:Dde_2978 hypothetical protein YP_003185621.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: gbm:Gbem_3348 FolC bifunctional protein YP_003185622.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: aeh:Mlg_1229 isopropylmalate isomerase small subunit YP_003185623.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: sfr:Sfri_3818 isopropylmalate isomerase large subunit YP_003185624.1 KEGG: afw:Anae109_1754 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003185625.1 KEGG: dvl:Dvul_1690 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003185626.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; KEGG: dps:DP2770 acetolactate synthase, small subunit YP_003185627.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: glo:Glov_2503 acetolactate synthase, large subunit, biosynthetic type YP_003185628.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_003185630.1 KEGG: sde:Sde_3057 branched chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003185631.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: gme:Gmet_1629 homoserine dehydrogenase YP_003185632.1 PFAM: PfkB domain protein; KEGG: pfkB-type carbohydrate kinase family protein YP_003185633.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_9631 trehalosemaltose ABC transporter YP_003185634.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_9630 trehalosemaltose ABC transporter YP_003185635.1 PFAM: extracellular solute-binding protein family 1; KEGG: ara:Arad_9629 trehalosemaltose ABC transporter YP_003185636.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hch:HCH_06458 transcriptional regulator YP_003185637.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: scl:sce1136 putative regulator of molybdate uptake YP_003185638.1 KEGG: afr:AFE_1498 ABC transporter, periplasmic substrate-binding protein, putative YP_003185639.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afe:Lferr_1848 binding-protein-dependent transport systems inner membrane component YP_003185640.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; Redoxin domain protein; KEGG: aeh:Mlg_0829 1-Cys peroxiredoxin YP_003185641.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pla:Plav_2689 BadM/Rrf2 family transcriptional regulator YP_003185643.1 PFAM: glycoside hydrolase family 18; Peptidoglycan- binding lysin domain; SMART: chitinase II; Peptidoglycan-binding LysM; KEGG: cvi:CV_2736 chitinase YP_003185645.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0379 amino acid transporter YP_003185649.1 KEGG: sun:SUN_0691 hypothetical protein YP_003185650.1 KEGG: ppd:Ppro_2695 hypothetical protein YP_003185651.1 KEGG: mxa:MXAN_3266 hypothetical protein YP_003185652.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gur:Gura_3872 ABC transporter related YP_003185653.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gur:Gura_3873 ABC transporter related YP_003185654.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: shl:Shal_3334 Na+/H+ antiporter NhaC YP_003185656.1 PFAM: extracellular solute-binding protein family 5; KEGG: afr:AFE_2987 peptide ABC transporter, periplasmic peptide-binding protein YP_003185657.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afr:AFE_2991 peptide ABC transporter, permease protein YP_003185658.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_2642 binding-protein-dependent transport systems inner membrane component YP_003185659.1 PFAM: extracellular solute-binding protein family 5; KEGG: afr:AFE_2987 peptide ABC transporter, periplasmic peptide-binding protein YP_003185660.1 KEGG: bja:blr1357 peptide ABC transporter ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003185661.1 KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003185662.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_2007 two component transcriptional regulator, winged helix family YP_003185663.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sensory histidine protein kinase YP_003185664.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: aha:AHA_1272 protein ligase YP_003185665.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gme:Gmet_3382 heavy metal sensor signal transduction histidine kinase YP_003185666.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_0243 two component transcriptional regulator, winged helix family YP_003185667.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tmz:Tmz1t_2253 transcriptional regulator, LysR family YP_003185668.1 KEGG: dde:Dde_0176 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_003185669.1 KEGG: hhe:HH0928 exodeoxyribonuclease LexA; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_003185670.1 PFAM: peptidase S41; SMART: peptidase S41; KEGG: cps:CPS_2740 hypothetical protein YP_003185671.1 KEGG: gsu:GSU1629 glyceraldehyde 3-phosphate dehydrogenase 1; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_003185672.1 PFAM: putative sugar-binding domain protein; KEGG: oan:Oant_3075 DeoR family transcriptional regulator YP_003185673.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_003185674.1 PFAM: PfkB domain protein; KEGG: pfo:Pfl01_1923 ribokinase YP_003185675.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cvi:CV_3016 ribose ABC transporter, substrate binding protein YP_003185676.1 PFAM: inner-membrane translocator; KEGG: lhk:LHK_01713 RbsC YP_003185677.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lhk:LHK_01712 RbsA YP_003185678.1 PFAM: RbsD or FucU transport; KEGG: lhk:LHK_01711 RbsD YP_003185679.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: vap:Vapar_4639 transcriptional regulator, LacI family YP_003185680.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: geo:Geob_3727 ABC transporter related YP_003185681.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gur:Gura_3231 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_003185682.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: esa:ESA_03275 DNA-binding transcriptional regulator AraC YP_003185684.1 KEGG: gme:Gmet_0222 bifunctional methionine sulfoxide reductase B/A protein; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B YP_003185685.1 PFAM: protein of unknown function DUF218; KEGG: tmz:Tmz1t_0817 protein of unknown function DUF218 YP_003185686.1 PFAM: inositol monophosphatase; KEGG: pla:Plav_0630 inositol-phosphate phosphatase YP_003185687.1 KEGG: bpy:Bphyt_5748 mannonate dehydratase; TIGRFAM: mannonate dehydratase; PFAM: Mannonate dehydratase; Xylose isomerase domain protein TIM barrel YP_003185688.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: scl:sce1239 hypothetical protein YP_003185689.1 PFAM: PfkB domain protein; KEGG: vap:Vapar_3414 PfkB domain protein YP_003185690.1 KEGG: ppd:Ppro_2915 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_003185691.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324; KEGG: mxa:MXAN_7277 CRISPR-associated RAMP Cmr6 family protein YP_003185692.1 TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1; KEGG: mmw:Mmwyl1_2689 CRISPR-associated Cmr5 family protein YP_003185693.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: mxa:MXAN_7279 CRISPR-associated RAMP Cmr4 family protein family protein YP_003185694.1 PFAM: CRISPR-associated protein, Cmr3; KEGG: mmw:Mmwyl1_2691 hypothetical protein YP_003185695.1 TIGRFAM: CRISPR-associated protein, Crm2 family; KEGG: mxa:MXAN_7281 CRISPR-associated Cmr2 family protein YP_003185696.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: mmw:Mmwyl1_2693 CRISPR-associated RAMP Cmr1 family protein; SNP YP_003185697.1 TIGRFAM: CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein TM1812; KEGG: sfu:Sfum_1352 CRISPR-associated protein, TM1812 family YP_003185698.1 KEGG: dol:Dole_0745 CRISPR-associated protein APE2256 family YP_003185700.1 PFAM: major facilitator superfamily MFS_1; KEGG: hhe:HH1614 hypothetical protein YP_003185701.1 PFAM: protein of unknown function DUF88; KEGG: pla:Plav_2865 hypothetical protein YP_003185702.1 PFAM: ROK family protein; KEGG: mxa:MXAN_6549 ROK family transcriptional regulator YP_003185703.1 PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: dvm:DvMF_2542 methyl-accepting chemotaxis sensory transducer YP_003185704.1 PFAM: extracellular solute-binding protein family 1; KEGG: dde:Dde_3657 sugar ABC transporter, substrate- binding protein YP_003185705.1 aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates YP_003185706.1 PFAM: Acetamidase/Formamidase; KEGG: tgr:Tgr7_3110 formamidase YP_003185707.1 KEGG: oca:OCAR_7091 integral membrane sensor signal transduction histidine kinase YP_003185708.1 KEGG: hypothetical protein YP_003185709.1 KEGG: geo:Geob_2396 metal dependent phosphohydrolase YP_003185710.1 PFAM: transposase IS4 family protein; KEGG: rpd:RPD_1226 transposase, IS4 YP_003185712.1 PFAM: Polyphosphate kinase; KEGG: scl:sce0836 hypothetical protein YP_003185714.1 KEGG: afr:AFE_1141 hypothetical protein YP_003185715.1 PFAM: major facilitator superfamily MFS_1; KEGG: pmr:PMI1687 multidrug resistance protein (MFS- family transporter) YP_003185716.1 KEGG: CEP250; centrosomal protein 250kDa YP_003185718.1 PFAM: Coat F domain protein YP_003185719.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: smt:Smal_3818 DNA-binding transcriptional regulator AgaR YP_003185720.1 KEGG: gbm:Gbem_4017 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_003185721.1 TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; KEGG: esa:ESA_02588 galactokinase YP_003185722.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mes:Meso_3098 hypothetical protein YP_003185724.1 KEGG: pat:Patl_2657 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10 YP_003185725.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: tbd:Tbd_0236 hypothetical protein YP_003185726.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: SORD; sorbitol dehydrogenase ; K00008 L- iditol 2-dehydrogenase YP_003185727.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bav:BAV2575 membrane protein YP_003185728.1 PFAM: Penicillin-binding protein dimerisation domain; penicillin-binding protein transpeptidase; KEGG: dar:Daro_0113 peptidoglycan glycosyltransferase YP_003185729.1 PFAM: O-antigen polymerase; KEGG: dal:Dalk_1339 O-antigen polymerase YP_003185730.1 PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_1411 glycosyl transferase family protein YP_003185731.1 KEGG: mlo:mlr1763 hypothetical protein YP_003185733.1 KEGG: abo:ABO_0345 hypothetical protein YP_003185734.1 PFAM: Nitric oxide synthase NOS; KEGG: scl:sce1582 nitric-oxide synthase, oxygenase subunit YP_003185735.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: bxe:Bxe_C0544 SPFH domain-containing protein/band 7 family protein YP_003185737.1 PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; KEGG: lpp:lpp2105 hypothetical protein YP_003185738.1 PFAM: Lytic transglycosylase catalytic; KEGG: mxa:MXAN_0210 transglycosylase SLT domain- containing protein YP_003185739.1 KEGG: hypothetical LOC577126; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_003185740.1 KEGG: pla:Plav_3659 formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; zinc finger Fpg domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_003185741.1 KEGG: sat:SYN_02261 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; Helix-hairpin-helix domain protein class 2 YP_003185742.1 PFAM: Chorismate mutase; KEGG: bpn:BPEN_184 bifunctional chorismate mutase/prephenate dehydrogenase YP_003185743.1 KEGG: dol:Dole_2374 malate dehydrogenase, NAD- dependent; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_003185744.1 Converts isocitrate to alpha ketoglutarate YP_003185745.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; KEGG: acp:A2cp1_4150 PAS/PAC sensor signal transduction histidine kinase YP_003185746.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: vpa:VP1734 DNA-binding response regulator YP_003185747.1 KEGG: pmu:PM1621 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003185748.1 KEGG: vco:VC0395_A0037 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_003185749.1 KEGG: gme:Gmet_1216 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit YP_003185750.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: gur:Gura_3279 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_003185752.1 KEGG: nwi:Nwi_1860 DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; SMART: phosphoesterase PHP domain protein YP_003185753.1 PFAM: DRTGG domain protein; CBS domain containing protein; thioesterase superfamily protein; regulatory protein GntR HTH; SMART: CBS domain containing protein; KEGG: dvl:Dvul_0535 CBS domain-containing protein YP_003185754.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: sat:SYN_01478 hypothetical protein YP_003185758.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: geo:Geob_2459 cysteine synthase A YP_003185759.1 TIGRFAM: arginine repressor; PFAM: arginine repressor; KEGG: ank:AnaeK_0621 arginine repressor, ArgR YP_003185760.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: gsu:GSU1616 ImpB/MucB/SamB family protein YP_003185764.1 PFAM: beta-lactamase domain protein; KEGG: atc:AGR_C_2426 metal-dependent hydrolase YP_003185765.1 PFAM: protein of unknown function DUF964; KEGG: similar to LOC794500 protein YP_003185766.1 PFAM: globin; KEGG: bch:Bcen2424_2279 globin YP_003185767.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dal:Dalk_2623 transcriptional regulator, XRE family YP_003185768.1 TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; KEGG: gme:Gmet_3075 ExsB YP_003185770.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: mmw:Mmwyl1_3853 isoleucyl-tRNA synthetase YP_003185771.1 PFAM: alpha/beta hydrolase fold; KEGG: mlo:mll3776 streptothricin-acteyl-transferase YP_003185772.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: dal:Dalk_2650 serine O-acetyltransferase YP_003185773.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sfu:Sfum_0813 peptidase M20 YP_003185774.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_003185775.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: lpc:LPC_0668 hypothetical protein YP_003185776.1 KEGG: sme:SMa1881 hypothetical protein YP_003185777.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: scl:sce8102 multicopper oxidase YP_003185778.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: scl:sce6866 hypothetical protein YP_003185780.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: esa:ESA_01901 hypothetical protein YP_003185781.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rhi:NGR_c07350 putative acetyltransferase YP_003185782.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pla:Plav_1245 XRE family transcriptional regulator YP_003185783.1 PFAM: protein of unknown function DUF87; KEGG: nwi:Nwi_1954 hypothetical protein YP_003185784.1 KEGG: nwi:Nwi_1955 hypothetical protein YP_003185785.1 KEGG: spc:Sputcn32_3926 putative DNA modification methylase YP_003185786.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_003185787.1 TIGRFAM: small, acid-soluble spore protein tlp YP_003185790.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rlt:Rleg2_0270 alcohol dehydrogenase GroES domain protein YP_003185791.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dda:Dd703_1402 acyl-CoA dehydrogenase domain protein YP_003185792.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dda:Dd703_1399 AMP-dependent synthetase and ligase YP_003185793.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: tmz:Tmz1t_2325 acyl carrier protein YP_003185794.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpl:BURPS1106A_A3147 putative polyketide synthase YP_003185795.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: psa:PST_1812 2,4-dienoyl-CoA reductase FadH1 YP_003185796.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_1766 cyclohexanecarboxylate-CoA ligase YP_003185797.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dda:Dd703_1402 acyl-CoA dehydrogenase domain protein YP_003185798.1 KEGG: ank:AnaeK_4176 phospho-2-dehydro-3- deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003185800.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sml:Smlt3589 putative peptidoglycan binding ErfK/YbiS/YcfS/YnhG protein YP_003185802.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: ade:Adeh_0870 sodium/hydrogen exchanger YP_003185804.1 KEGG: sgl:SGP2_0013 hypothetical protein YP_003185806.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: shm:Shewmr7_3716 short-chain dehydrogenase/reductase SDR YP_003185807.1 PFAM: thioesterase superfamily protein; KEGG: pmy:Pmen_4381 thioesterase superfamily protein YP_003185808.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_003185809.1 PFAM: Beta-ketoacyl synthase; KEGG: saz:Sama_1978 3-oxoacyl-(acyl-carrier- protein) synthase II YP_003185810.1 KEGG: ank:AnaeK_0334 hypothetical protein YP_003185811.1 PFAM: aldo/keto reductase; KEGG: scl:sce3333 aldo/keto reductase family oxidoreductase YP_003185812.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpf:Rpic12D_3395 pyrimidine 5'-nucleotidase YP_003185813.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gsu:GSU0756 methyl-accepting chemotaxis protein YP_003185814.1 PFAM: thioesterase superfamily protein; KEGG: geo:Geob_1166 thioesterase superfamily protein YP_003185815.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid- binding ACT domain protein; KEGG: abo:ABO_1563 formyltetrahydrofolate deformylase YP_003185816.1 KEGG: hypothetical protein YP_003185817.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: scl:sce0245 sirohydrochlorin cobaltochelatase YP_003185818.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvl:Dvul_2236 uroporphyrin-III C- methyltransferase YP_003185819.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: noc:Noc_1306 sulfite reductase subunit beta YP_003185820.1 KEGG: acp:A2cp1_2200 phosphoadenylyl-sulfate reductase (thioredoxin); TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_003185822.1 TIGRFAM: siroheme synthase; KEGG: cvi:CV_0813 uroporphyrin-III C- methyltransferase YP_003185823.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: prw:PsycPRwf_1468 EmrB/QacA family drug resistance transporter YP_003185824.1 KEGG: shl:Shal_0505 secretion protein HlyD family protein YP_003185825.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: dar:Daro_0113 peptidoglycan glycosyltransferase YP_003185826.1 PFAM: glycosyl transferase family 2; KEGG: ank:AnaeK_0796 glycosyl transferase family 2 YP_003185827.1 PFAM: NLP/P60 protein; KEGG: bpt:Bpet2252 hypothetical protein YP_003185828.1 PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: phosphosulfolactate synthase YP_003185829.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_3813 glyoxalase/bleomycin resistance protein/dioxygenase YP_003185830.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003185832.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: hypothetical protein YP_003185833.1 PFAM: GerA spore germination protein; KEGG: hypothetical protein YP_003185834.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: sdn:Sden_0504 peptidase S1C, Do YP_003185835.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: azo:azo1885 putative oxidoreductase precursor YP_003185836.1 PFAM: Squalene/phytoene synthase; KEGG: azo:azo1884 putative phytoene synthase YP_003185837.1 KEGG: bbr:BB3272 putative phytoene synthase; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase YP_003185838.1 KEGG: gme:Gmet_2820 terpene synthase:squalene cyclase; TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_003185839.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NmrA family protein; KEGG: glo:Glov_2234 hopanoid-associated sugar epimerase YP_003185840.1 PFAM: purine or other phosphorylase family 1; KEGG: afw:Anae109_4078 membrane protein-like protein YP_003185841.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: ppd:Ppro_1192 radical SAM domain-containing protein YP_003185842.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: mxa:MXAN_5021 isopentenyl pyrophosphate isomerase YP_003185843.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: geo:Geob_3664 deoxyxylulose-5-phosphate synthase YP_003185845.1 KEGG: hypothetical protein YP_003185846.1 PFAM: acyltransferase 3; KEGG: hypothetical protein YP_003185847.1 PFAM: AMP-dependent synthetase and ligase; KEGG: noc:Noc_2380 AMP-dependent synthetase and ligase YP_003185848.1 TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: geo:Geob_1727 oligoendopeptidase, M3 family YP_003185849.1 KEGG: hypothetical protein LOC100030415 YP_003185850.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: hypothetical protein YP_003185851.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: hypothetical protein YP_003185852.1 PFAM: glycoside hydrolase family 28; KEGG: sde:Sde_0953 glycoside hydrolase family protein YP_003185853.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04137 putative transport system permease ABC transporter protein YP_003185854.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_4624 sugar ABC transporter YP_003185855.1 PFAM: extracellular solute-binding protein family 1; KEGG: ara:Arad_4622 sugar ABC transporter YP_003185856.1 KEGG: ypb:YPTS_0329 hypothetical protein YP_003185857.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: ara:Arad_4618 oxidoreducatse protein YP_003185858.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bph:Bphy_5674 LacI family transcription regulator YP_003185859.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_C0162 flavin reductase-like protein YP_003185860.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: azo:azo2410 DNA polymerase III epsilon chain- like protein YP_003185861.1 PFAM: Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: abo:ABO_2157 CBS domain-containing protein YP_003185862.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: dat:HRM2_45740 GlnA2 YP_003185863.1 TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: sfu:Sfum_0727 ammonium transporter YP_003185864.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: azo:azo2636 putative CbbY family protein YP_003185865.1 KEGG: vfm:VFMJ11_0712 oligopeptide transport ATP- binding protein AppF; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003185866.1 KEGG: bav:BAV0998 oligopeptide ABC transporter,ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003185867.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU1435 peptide ABC transporter, permease protein YP_003185868.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_0037 binding-protein-dependent transport systems inner membrane component YP_003185869.1 PFAM: extracellular solute-binding protein family 5; KEGG: oan:Oant_3599 extracellular solute-binding protein YP_003185870.1 PFAM: glycoside hydrolase family 9; KEGG: xca:xccb100_1785 exported putative cellulose 1,4-beta-cellobiosidase YP_003185871.1 TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: sat:SYN_01258 quinolinate synthetase YP_003185872.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rpb:RPB_1106 L-aspartate oxidase YP_003185873.1 KEGG: pla:Plav_0732 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003185874.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bbr:BB3446 hypothetical protein YP_003185875.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: xca:xccb100_2289 molybdopterin biosynthesis protein MoeB YP_003185876.1 PFAM: thiazole biosynthesis family protein; KEGG: ppd:Ppro_3475 thiazole synthase YP_003185877.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: scl:sce5268 hypothetical protein YP_003185878.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mxa:MXAN_4231 glycine oxidase ThiO YP_003185879.1 PFAM: thiamine monophosphate synthase; KEGG: gsu:GSU0587 thiamine-phosphate pyrophosphorylase YP_003185880.1 PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; KEGG: sun:SUN_1298 putative manganese-dependent inorganic pyrophosphatase YP_003185881.1 PFAM: major facilitator superfamily MFS_1; KEGG: xca:xccb100_2007 MFS family drug efflux transporter YP_003185882.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bcn:Bcen_3702 EmrB/QacA family drug resistance transporter YP_003185883.1 KEGG: similar to amino acid features LIM1, LIM2, and homeodomain; K09370 insulin gene enhancer protein ISL YP_003185884.1 PFAM: protein of unknown function DUF583; KEGG: hypothetical protein YP_003185886.1 PFAM: extracellular solute-binding protein family 5; KEGG: afr:AFE_2987 peptide ABC transporter, periplasmic peptide-binding protein YP_003185887.1 PFAM: extracellular solute-binding protein family 5; KEGG: afr:AFE_2987 peptide ABC transporter, periplasmic peptide-binding protein YP_003185888.1 PFAM: DinB family protein; KEGG: bpy:Bphyt_6943 DinB family protein YP_003185889.1 PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: hha:Hhal_0183 NAD-dependent epimerase/dehydratase YP_003185890.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_0499 transporter, major facilitator family YP_003185896.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: oan:Oant_1994 PfpI family intracellular peptidase YP_003185897.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS0283 putative MCP-type signal transduction protein YP_003185898.1 PFAM: amino acid permease-associated region; KEGG: bph:Bphy_5772 amino acid permease-associated region YP_003185899.1 PFAM: Aldehyde Dehydrogenase; KEGG: aldehyde dehydrogenase ; K00128 aldehyde dehydrogenase (NAD+) YP_003185900.1 PFAM: Collagen triple helix repeat; KEGG: scl:sce2398 hypothetical protein YP_003185903.1 KEGG: sat:SYN_02803 glycosyltransferase YP_003185904.1 PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce4302 ABC-type dipeptide transport system, periplasmic component YP_003185905.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: esa:ESA_01735 hypothetical protein YP_003185906.1 PFAM: beta-lactamase domain protein; KEGG: dat:HRM2_31220 putative metallo-beta- lactamase family protein YP_003185907.1 PFAM: Resolvase domain; KEGG: afr:AFE_1105 transposon, resolvase YP_003185908.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: xfm:Xfasm12_1563 transposase OrfB YP_003185909.1 KEGG: bph:Bphy_5549 major facilitator transporter YP_003185910.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rpt:Rpal_2628 xylose isomerase domain protein TIM barrel YP_003185911.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sde:Sde_2647 dehydrogenase YP_003185912.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: azo:azo0770 alkyl hydroperoxide reductase subunit F YP_003185913.1 KEGG: dac:Daci_5072 alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein YP_003185914.1 PFAM: ferric-uptake regulator; KEGG: sat:SYN_02524 ferric uptake regulator family protein YP_003185915.1 KEGG: dma:DMR_43160 proline iminopeptidase; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold YP_003185916.1 PFAM: amino acid permease-associated region; KEGG: amino acid/polyamine transporter I YP_003185917.1 PFAM: amino acid permease-associated region; Spore germination protein; KEGG: bxe:Bxe_B0686 beta-alanine/gamma- aminobutyrate-H+ symporter YP_003185918.1 PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase YP_003185919.1 KEGG: dma:DMR_22630 fis family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: helix-turn-helix Fis-type; sigma-54 factor interaction domain-containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_003185920.1 PFAM: FAD linked oxidase domain protein; KEGG: rme:Rmet_2924 FAD linked oxidase-like protein YP_003185921.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bgl:bglu_1g19660 general substrate transporter YP_003185922.1 PFAM: alpha/beta hydrolase fold; KEGG: scl:sce0898 hydrolase YP_003185923.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bxe:Bxe_A1446 L-lactate/H+ symporter YP_003185924.1 KEGG: tgr:Tgr7_2550 malate synthase A; TIGRFAM: malate synthase A; PFAM: Malate synthase family protein YP_003185925.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: yen:YE1877 IclR family transcriptional regulator YP_003185926.1 PFAM: FAD linked oxidase domain protein; KEGG: afw:Anae109_2921 D-lactate dehydrogenase (cytochrome) YP_003185927.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: acp:A2cp1_3045 protein of unknown function DUF224 cysteine-rich region domain protein YP_003185928.1 PFAM: FAD linked oxidase domain protein; KEGG: ade:Adeh_2866 FAD linked oxidase-like YP_003185929.1 PFAM: glycosyl transferase family 2; KEGG: smt:Smal_2718 N-glycosyltransferase PgaC YP_003185930.1 KEGG: tgr:Tgr7_0134 hypothetical protein YP_003185931.1 TIGRFAM: glutaredoxin-like domain protein; PFAM: glutaredoxin; KEGG: acp:A2cp1_2897 glutaredoxin-like domain protein YP_003185932.1 PFAM: Activator of Hsp90 ATPase 1 family protein; SMART: regulatory protein ArsR; KEGG: scl:sce6422 ArsR family transcriptional regulator YP_003185934.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: hha:Hhal_1202 tyrosine recombinase XerC YP_003185940.1 KEGG: pca:Pcar_0796 hypothetical protein YP_003185941.1 KEGG: Srrm2; serine/arginine repetitive matrix 2 YP_003185944.1 PFAM: cyclase family protein; KEGG: scl:sce1525 hypothetical protein YP_003185945.1 KEGG: ank:AnaeK_2421 glucose-6-phosphate 1- dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003185946.1 KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_003185947.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; helicase domain protein; KEGG: dol:Dole_2483 preprotein translocase, SecA subunit YP_003185948.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: gbm:Gbem_0870 sigma 54 modulation protein/ribosomal protein S30EA YP_003185949.1 PFAM: transposase IS4 family protein; KEGG: dat:HRM2_33940 transposase family protein YP_003185950.1 PFAM: glycosyl transferase family 2; KEGG: cha:CHAB381_0957 ss-1,4-galactosyltransferase YP_003185951.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ubiE/COQ5 methyltransferase YP_003185952.1 PFAM: glycosyl transferase family 2; KEGG: acp:A2cp1_2617 glycosyl transferase family 2 YP_003185953.1 PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook- associated protein 2 domain protein; KEGG: eta:ETA_14230 flagellar hook-associated protein 2 YP_003185954.1 PFAM: flagellin domain protein; KEGG: gsu:GSU3038 flagellin FliC YP_003185955.1 PFAM: flagellin domain protein; KEGG: geo:Geob_0636 flagellar hook-associated protein 3 YP_003185956.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: gbm:Gbem_3755 flagellar hook-associated protein FlgK YP_003185959.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: xoo:XOO2621 RNA polymerase sigma factor FliA YP_003185961.1 KEGG: dde:Dde_0784 ComF family protein YP_003185962.1 KEGG: gbm:Gbem_2951 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003185963.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sat:SYN_00981 response regulator YP_003185964.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: similar to ankyrin repeat domain 24 YP_003185966.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: xca:xccb100_3213 two-component system regulatory protein YP_003185967.1 KEGG: geo:Geob_1656 methionine adenosyltransferase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003185968.1 KEGG: bac:BamMC406_3703 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_003185970.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA0930 permease YP_003185971.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: scl:sce4837 putative phosphoglucomutase/phosphomannomutase YP_003185972.1 PFAM: dienelactone hydrolase; KEGG: scl:sce0100 putative carboxymethylenebutenolidase YP_003185973.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: dps:DP2397 molybdopterin biosynthesis protein (Mog) YP_003185974.1 KEGG: sfu:Sfum_0197 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003185975.1 PFAM: peptidase S15; KEGG: asu:Asuc_2080 cinnamoyl ester hydrolase YP_003185978.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: dde:Dde_3108 hypothetical protein YP_003185979.1 PFAM: ABC-1 domain protein; KEGG: geo:Geob_2316 ABC-1 domain protein YP_003185980.1 KEGG: dat:HRM2_31120 hypothetical protein YP_003185981.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gsu:GSU1403 ribosomal large subunit pseudouridine synthase B YP_003185984.1 KEGG: pca:Pcar_2354 cell division membrane protein YP_003185985.1 PFAM: ApbE family lipoprotein; KEGG: ade:Adeh_1571 ApbE-like lipoprotein YP_003185986.1 KEGG: par:Psyc_2081 hypothetical protein YP_003185987.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: tau:Tola_0576 transcriptional regulator, LacI family YP_003185988.1 PFAM: aldo/keto reductase; KEGG: ank:AnaeK_1755 aldo/keto reductase YP_003185989.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mes:Meso_4103 cytochrome c biogenesis protein, transmembrane region YP_003185990.1 PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mms:mma_1227 PHP-like metal-dependent phosphoesterase YP_003185992.1 PFAM: lipolytic protein G-D-S-L family; KEGG: pat:Patl_0828 lipolytic enzyme, G-D-S-L YP_003185993.1 KEGG: dar:Daro_4058 hypothetical protein YP_003185994.1 PFAM: ApbE family lipoprotein; KEGG: bcs:BCAN_B0236 ApbE-like lipoprotein YP_003185995.1 PFAM: FMN-binding domain protein; KEGG: mlo:mll6621 hypothetical protein YP_003185998.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0000571 putative multidrug transport protein YP_003185999.1 KEGG: gme:Gmet_1643 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase YP_003186000.1 KEGG: sat:SYN_02773 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003186001.1 PFAM: Domain of unknown function DUF2520; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: dal:Dalk_1778 6-phosphogluconate dehydrogenase NAD-binding YP_003186003.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfs:PFLU2767 putative transmembrane transport protein YP_003186004.1 KEGG: nmu:Nmul_A0278 glycosyl transferase family protein YP_003186005.1 PFAM: ferric-uptake regulator; KEGG: pca:Pcar_1952 negative regulator of ferric uptake YP_003186006.1 PFAM: periplasmic solute binding protein; KEGG: afe:Lferr_0754 periplasmic solute binding protein YP_003186007.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afr:AFE_0603 cation ABC transporter, ATP- binding protein, putative YP_003186008.1 PFAM: ABC-3 protein; KEGG: bpy:Bphyt_0294 ABC-3 protein YP_003186009.1 PFAM: ABC-3 protein; KEGG: bpy:Bphyt_0295 ABC-3 protein YP_003186010.1 PFAM: thioesterase superfamily protein; KEGG: afw:Anae109_1188 thioesterase superfamily protein YP_003186011.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: scl:sce5361 putative oxidoreductase YP_003186012.1 KEGG: scl:sce8391 WD repeat-containing protein YP_003186013.1 KEGG: rlt:Rleg2_4101 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003186014.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mlo:mll1511 hypothetical protein YP_003186015.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bur:Bcep18194_B3147 major facilitator transporter YP_003186017.1 PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: bja:bll4878 copper export protein YP_003186018.1 PFAM: nuclear export factor GLE1; KEGG: pla:Plav_0807 nuclear export factor GLE1 YP_003186019.1 PFAM: phosphate transporter; KEGG: gme:Gmet_3131 phosphate transporter YP_003186020.1 PFAM: Putitive phosphate transport regulator; KEGG: gme:Gmet_3132 hypothetical protein YP_003186022.1 PFAM: ROK family protein; KEGG: mxa:MXAN_6549 ROK family transcriptional regulator YP_003186023.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: pat:Patl_3730 glycoside hydrolase family protein YP_003186024.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bur:Bcep18194_B3165 undecaprenyl- diphosphatase YP_003186025.1 KEGG: acp:A2cp1_2265 hypothetical protein YP_003186026.1 KEGG: ade:Adeh_2379 putative transmembrane transcriptional regulator (anti-sigma factor) YP_003186027.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mxa:MXAN_6759 RNA polymerase sigma-E factor YP_003186029.1 KEGG: pin:Ping_0439 hypothetical protein YP_003186030.1 KEGG: tgr:Tgr7_2439 hypothetical protein YP_003186031.1 KEGG: reu:Reut_A0190 hypothetical protein YP_003186032.1 PFAM: protein of unknown function DUF156; KEGG: pca:Pcar_0892 hypothetical protein YP_003186033.1 PFAM: protein of unknown function DUF81; KEGG: afr:AFE_2775 membrane protein YP_003186034.1 PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: tbd:Tbd_1282 rhodanese-like protein YP_003186035.1 PFAM: SirA family protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: tbd:Tbd_2399 rhodanese-like protein YP_003186036.1 PFAM: DsrE family protein; KEGG: vok:COSY_0218 hypothetical protein YP_003186037.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: tbd:Tbd_2399 rhodanese-like protein YP_003186038.1 PFAM: protein of unknown function DUF81; KEGG: scl:sce0739 hypothetical protein YP_003186039.1 KEGG: tgr:Tgr7_2439 hypothetical protein YP_003186040.1 TIGRFAM: CRISPR-associated protein, GSU0053 family; PFAM: CRISPR-associated protein GSU0053; KEGG: tgr:Tgr7_2440 hypothetical protein YP_003186041.1 KEGG: tgr:Tgr7_2441 hypothetical protein YP_003186042.1 KEGG: tgr:Tgr7_2442 hypothetical protein; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: helicase domain protein YP_003186043.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: net:Neut_1012 CRISPR-associated Cas2 family protein YP_003186044.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: gme:Gmet_1072 hypothetical protein YP_003186045.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; KEGG: geo:Geob_3411 CRISPR-associated protein Cas4 YP_003186046.1 TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: pap:PSPA7_5702 thiamine biosynthesis protein ThiC YP_003186047.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: psb:Psyr_2922 permease for cytosine/purines, uracil, thiamine, allantoin YP_003186048.1 PFAM: protein of unknown function DUF347; KEGG: afr:AFE_2330 hypothetical protein YP_003186049.1 KEGG: noc:Noc_0344 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_003186050.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: dvm:DvMF_3169 heavy metal transport/detoxification protein YP_003186051.1 PFAM: protein of unknown function DUF156; KEGG: cvi:CV_3642 hypothetical protein YP_003186052.1 PFAM: protein of unknown function DUF322; KEGG: Os03g0168100; hypothetical protein YP_003186055.1 PFAM: protein of unknown function DUF322 YP_003186056.1 PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: mlo:mll9538 transcriptional regulator-like protein YP_003186057.1 PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: dat:HRM2_42870 AspC5 YP_003186058.1 PFAM: major facilitator superfamily MFS_1; KEGG: dar:Daro_3345 major facilitator transporter YP_003186059.1 PFAM: Alcohol dehydrogenase GroES domain protein; alanine dehydrogenase/PNT domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bba:Bd0900 NADP-dependent alcohol dehydrogenase YP_003186060.1 PFAM: regulatory protein TetR; KEGG: scl:sce8104 TetR family transcriptional regulator YP_003186061.1 PFAM: aminotransferase class-III; KEGG: dvm:DvMF_0516 aminotransferase class-III YP_003186062.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: gur:Gura_0121 glucosamine--fructose-6- phosphate aminotransferase YP_003186063.1 KEGG: geo:Geob_3419 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_003186064.1 PFAM: YbbR family protein; KEGG: pca:Pcar_1000 hypothetical protein YP_003186065.1 PFAM: protein of unknown function DUF147; KEGG: pca:Pcar_0999 hypothetical protein YP_003186066.1 PFAM: lipolytic protein G-D-S-L family; KEGG: afw:Anae109_0069 GDSL family lipase YP_003186067.1 TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase; KEGG: wpi:WPa_0574 polysaccharide deacetylase, putative YP_003186068.1 KEGG: vvy:VVA0375 TPR repeat-containing protein YP_003186069.1 PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: pca:Pcar_1590 chromosome partitioning ATPase YP_003186071.1 KEGG: mca:MCA1296 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_003186072.1 PFAM: ribosomal protein S9; KEGG: gsu:GSU2875 30S ribosomal protein S9 YP_003186073.1 TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: abo:ABO_0576 50S ribosomal protein L13 YP_003186074.1 KEGG: gme:Gmet_0605 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003186075.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: ppd:Ppro_0707 50S ribosomal protein L17 YP_003186076.1 KEGG: afw:Anae109_1938 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003186077.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_003186078.1 TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; KEGG: dal:Dalk_1891 ribosomal protein S11 YP_003186079.1 TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; KEGG: geo:Geob_3602 ribosomal protein S13 YP_003186080.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: cla:Cla_0091 50S ribosomal protein L36 YP_003186081.1 TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: dps:DP1147 translation initiation factor IF-1 YP_003186083.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: sfu:Sfum_1576 adenylate kinases YP_003186084.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: dps:DP1145 preprotein translocase subunit SecY YP_003186085.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: gbm:Gbem_0952 ribosomal protein L15 YP_003186086.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: maq:Maqu_0737 ribosomal protein L30 YP_003186087.1 TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; KEGG: pca:Pcar_0718 30S ribosomal protein S5 YP_003186088.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: hypothetical protein ; K02881 large subunit ribosomal protein L18 YP_003186089.1 TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; KEGG: dma:DMR_12350 50S ribosomal protein L6 YP_003186090.1 PFAM: ribosomal protein S8; KEGG: sfu:Sfum_1569 ribosomal protein S8 YP_003186091.1 PFAM: ribosomal protein S14; KEGG: hpj:jhp1226 30S ribosomal protein S14 YP_003186092.1 PFAM: ribosomal protein L5; KEGG: scl:sce7951 50S ribosomal protein L5 YP_003186093.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_003186094.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_003186095.1 TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; KEGG: hch:HCH_06208 30S ribosomal protein S17 YP_003186096.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: pca:Pcar_0709 ribosomal protein L29 YP_003186097.1 TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; KEGG: gbm:Gbem_0940 ribosomal protein L16 YP_003186098.1 KEGG: cbs:COXBURSA331_A0343 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein YP_003186099.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: sfu:Sfum_1560 ribosomal protein L22 YP_003186100.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: bph:Bphy_2836 30S ribosomal protein S19 YP_003186101.1 TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: glo:Glov_1349 50S ribosomal protein L2 YP_003186102.1 PFAM: Ribosomal protein L25/L23; KEGG: sat:SYN_00987 50S ribosomal protein L23 YP_003186103.1 PFAM: ribosomal protein L4/L1e; KEGG: sfu:Sfum_1556 ribosomal protein L4/L1e YP_003186104.1 TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; KEGG: pca:Pcar_0701 50S ribosomal protein L3 YP_003186105.1 TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: ank:AnaeK_1933 ribosomal protein S10 YP_003186106.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: fph:Fphi_1039 elongation factor Tu YP_003186107.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: nis:NIS_0272 elongation factor G YP_003186108.1 TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: dvl:Dvul_1769 30S ribosomal protein S7 YP_003186109.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: pca:Pcar_0696 30S ribosomal protein S12 YP_003186111.1 KEGG: afr:AFE_0321 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_003186112.1 KEGG: similar to DNA-directed RNA polymerase beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain YP_003186113.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: avn:Avin_07730 rRNA (guanine-N(2))- methyltransferase YP_003186114.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: afr:AFE_0318 ribosomal protein L7/L12 YP_003186115.1 PFAM: ribosomal protein L10; KEGG: ppd:Ppro_0671 50S ribosomal protein L10 YP_003186116.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: gur:Gura_1058 50S ribosomal protein L1 YP_003186117.1 KEGG: scl:sce0406 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11 YP_003186118.1 KEGG: bmj:BMULJ_03018 transcriptional antiterminator; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein YP_003186119.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: bav:BAV0007 preprotein translocase SecE subunit YP_003186120.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: geo:Geob_3639 ribosomal protein L33 YP_003186121.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_003186122.1 PFAM: protein of unknown function DUF901; KEGG: hypothetical protein ; K06962 YP_003186123.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mxa:MXAN_3063 RNA methyltransferase YP_003186124.1 PFAM: ribonuclease III; KEGG: URF 4-related YP_003186125.1 KEGG: hha:Hhal_0107 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M) YP_003186126.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: GSVIVT00036298001; hypothetical protein LOC100250310 YP_003186127.1 KEGG: avn:Avin_38730 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase, IspF, YgbB; TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003186128.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ank:AnaeK_2591 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase YP_003186129.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: sat:SYN_01402 hypothetical protein YP_003186130.1 KEGG: nam:NAMH_0138 CDP-diacylglycerol--serine O- phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003186131.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_003186132.1 TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; KEGG: pca:Pcar_2764 DNA repair protein RadA YP_003186133.1 PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: CLPC; CLPC (HEAT SHOCK PROTEIN 93-V); ATP binding / ATPase YP_003186134.1 PFAM: ATP:guanido phosphotransferase; KEGG: ATP:guanido phosphotransferase, C-terminal catalytic domain containing protein ; K00934 arginine kinase YP_003186135.1 PFAM: UvrB/UvrC protein; KEGG: gbm:Gbem_0150 excinuclease ABC, B subunit YP_003186136.1 PFAM: Firmicute transcriptional repressor of class III stress genes YP_003186137.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; regulatory protein LuxR; KEGG: avn:Avin_45020 RNA polymerase sigma factor, ECF subfamily YP_003186138.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: lip:LI1020 (3R)-hydroxymyristoyl-ACP dehydratase YP_003186139.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mxa:MXAN_4626 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase YP_003186140.1 TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: pla:Plav_2562 flagellar basal body rod protein YP_003186141.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: vap:Vapar_4196 flagellar basal body FlaE domain protein YP_003186142.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: bba:Bd0211 rod shape-determining protein MreB YP_003186143.1 TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: atc:AGR_pAT_567 ribose operon repressor YP_003186144.1 PFAM: Peptidase M23; KEGG: hypothetical protein YP_003186145.1 TIGRFAM: SpoIID/LytB domain protein; KEGG: gsu:GSU2621 stage II sporulation-related protein YP_003186146.1 TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); KEGG: pca:Pcar_2690 UDP-N-acetylglucosamine 1- carboxyvinyltransferase YP_003186149.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: dds:Ddes_2189 ATP synthase F1, epsilon subunit YP_003186150.1 KEGG: pca:Pcar_3131 F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_003186151.1 TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: mxa:MXAN_6925 ATP synthase F1, gamma subunit YP_003186152.1 KEGG: nis:NIS_1222 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; HerA-ATP synthase, barrel domain; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003186153.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: gme:Gmet_3409 F0F1 ATP synthase subunit delta YP_003186154.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: ade:Adeh_4338 ATP synthase F0, B subunit YP_003186155.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: fph:Fphi_0957 F0F1 ATP synthase subunit C YP_003186156.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: afr:AFE_3209 ATP synthase F0, A subunit YP_003186159.1 KEGG: geo:Geob_2117 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003186160.1 KEGG: pna:Pnap_1726 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003186161.1 PFAM: glycine hydroxymethyltransferase; Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gbm:Gbem_3102 glycine hydroxymethyltransferase YP_003186162.1 PFAM: conserved hypothetical protein YP_003186163.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: bph:Bphy_3277 protein tyrosine phosphatase YP_003186164.1 PFAM: protein of unknown function DUF204; KEGG: pfl:PFL_2642 hypothetical protein YP_003186165.1 KEGG: bbr:BB2967 hypothetical protein YP_003186166.1 PFAM: protein of unknown function DUF1275; KEGG: nha:Nham_4228 hypothetical protein YP_003186167.1 KEGG: hypothetical protein LOC100147866 YP_003186170.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: hypothetical protein; K07566 putative translation factor YP_003186171.1 TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R YP_003186172.1 TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; KEGG: ppd:Ppro_3005 HemK family modification methylase YP_003186173.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: sfu:Sfum_1713 peptide chain release factor 1 YP_003186174.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: dol:Dole_0471 ribosomal protein L31 YP_003186175.1 KEGG: gbm:Gbem_3713 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; AAA ATPase YP_003186176.1 KEGG: gme:Gmet_0497 putative translaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_003186177.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gur:Gura_0495 two component, sigma-54 specific, fis family transcriptional regulator YP_003186178.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_003186179.1 PFAM: DNA-directed RNA polymerase delta subunit; KEGG: hypothetical protein YP_003186180.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_1572 short chain enoyl-CoA hydratase YP_003186181.1 PFAM: LamB/YcsF family protein; KEGG: bpt:Bpet0474 LamB/YcsF family protein YP_003186182.1 KEGG: bbr:BB4478 hypothetical protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2 YP_003186183.1 PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: stt:t2164 hypothetical protein YP_003186184.1 PFAM: glycosyl transferase family 2; KEGG: dde:Dde_3678 cell wall biosynthesis glycosyltransferase-like protein YP_003186186.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ilo:IL1212 agmatinase YP_003186187.1 TIGRFAM: spermidine synthase; PFAM: Spermine synthase; KEGG: SPE3; spermidine synthase YP_003186188.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: ade:Adeh_0360 butyryl-CoA dehydrogenase YP_003186189.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: scl:sce8562 putative NADPH quinone oxidoreductase YP_003186190.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: pla:Plav_0008 1A family penicillin-binding protein YP_003186191.1 PFAM: aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: aav:Aave_3888 aminotransferase YP_003186193.1 KEGG: Os05g0552600; hypothetical protein YP_003186195.1 KEGG: dab2; disabled homolog 2 (Drosophila) YP_003186197.1 KEGG: azo:azo1607 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003186198.1 KEGG: pna:Pnap_0042 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein YP_003186199.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: pin:Ping_0606 peptidase M24 YP_003186200.1 KEGG: mxa:MXAN_2361 hypothetical protein YP_003186201.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vsa:VSAL_I1419 putative acetyltransferase YP_003186203.1 PFAM: protein of unknown function DUF77; KEGG: afw:Anae109_1310 hypothetical protein YP_003186204.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5549 major facilitator transporter YP_003186205.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: vap:Vapar_6143 gluconate kinase YP_003186206.1 PFAM: metallophosphoesterase; KEGG: bvi:Bcep1808_3503 metallophosphoesterase YP_003186207.1 KEGG: gme:Gmet_2390 O-acetylhomoserine/O- acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003186208.1 PFAM: Uncharacterised protein family UPF0324; KEGG: ank:AnaeK_3265 hypothetical protein YP_003186209.1 PFAM: FAD dependent oxidoreductase; KEGG: hypothetical protein LOC100263250 YP_003186210.1 KEGG: cjr:CJE0187 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I YP_003186211.1 PFAM: Polyprenyl synthetase; KEGG: GSVIVT00014674001; hypothetical protein LOC100257359 YP_003186212.1 PFAM: Squalene/phytoene synthase; KEGG: phytoene synthase ; K02291 phytoene synthase YP_003186213.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: hha:Hhal_1619 phytoene dehydrogenase-related protein YP_003186214.1 PFAM: cytochrome P450; KEGG: bbt:BBta_0276 putative cytochrome P450 hydroxylase superfamily protein YP_003186215.1 TIGRFAM: lycopene cyclase domain protein; KEGG: hypothetical protein YP_003186216.1 PFAM: protein of unknown function DUF205; KEGG: vap:Vapar_3772 protein of unknown function DUF205 YP_003186217.1 PFAM: glycosyl transferase family 2; KEGG: acp:A2cp1_0800 glycosyl transferase family 2 YP_003186218.1 KEGG: cvi:CV_2235 iron-enterobactin transporter permease YP_003186219.1 PFAM: protein of unknown function DUF58; KEGG: scl:sce1388 hypothetical protein YP_003186220.1 KEGG: rpf:Rpic12D_3834 cyanate lyase; TIGRFAM: cyanate lyase; PFAM: Cyanate lyase domain protein YP_003186222.1 PFAM: aminoglycoside phosphotransferase; KEGG: mxa:MXAN_0104 aminoglycoside phosphotransferase family protein YP_003186223.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: reh:H16_B1806 transcriptional regulator, LacI- family YP_003186224.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein; KEGG: similar to predicted protein YP_003186225.1 TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: vco:VC0395_0083 purine nucleoside phosphorylase YP_003186226.1 TIGRFAM:2,3,4,5-tetrahydropyridine-2, 6-dicarboxylate N-acetyltransferase; PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase hexapeptide repeat containing protein; KEGG: hypothetical protein YP_003186227.1 KEGG: bbt:BBta_2982 putative amidohydrolase family protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003186229.1 PFAM: aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: gur:Gura_2501 aminotransferase, class I and II YP_003186231.1 KEGG: hypothetical protein YP_003186232.1 PFAM: major facilitator superfamily MFS_1; KEGG: gbm:Gbem_1224 major facilitator superfamily MFS_1 YP_003186233.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: neu:NE0362 tetrahydrofolate dehydrogenase/cyclohydrolase YP_003186234.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: scl:sce7376 sulfate-transporting ATPase YP_003186235.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pcr:Pcryo_1388 sulfate ABC transporter, permease protein CysW YP_003186236.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_1376 sulfate ABC transporter, permease protein CysT YP_003186237.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pmy:Pmen_4345 sulfate ABC transporter, periplasmic sulfate-binding protein YP_003186238.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bph:Bphy_1647 ABC transporter related YP_003186239.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl01_5412 binding-protein dependent transport system inner membrane protein YP_003186240.1 KEGG: pfs:PFLU2057 alkanesulfonate monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)- dependent; PFAM: Luciferase-like, subgroup YP_003186241.1 KEGG: pfl:PFL_5937 sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_003186242.1 TIGRFAM: FMN reductase; PFAM: NADPH-dependent FMN reductase; KEGG: rpi:Rpic_1212 NADPH-dependent FMN reductase YP_003186243.1 PFAM: Protein of unknown function DUF2292; KEGG: psa:PST_0212 hypothetical protein YP_003186244.1 PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: saz:Sama_1363 MerR family transcriptional regulator YP_003186245.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dac:Daci_2443 acyl-CoA dehydrogenase domain- containing protein YP_003186247.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine YP_003186248.1 TIGRFAM: dethiobiotin synthase; KEGG: ank:AnaeK_0076 dethiobiotin synthase YP_003186249.1 KEGG: gsu:GSU2629 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003186250.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: gme:Gmet_1580 adenosylmethionine-8-amino-7- oxononanoate aminotransferase YP_003186251.1 PFAM: monooxygenase FAD-binding; KEGG: mxa:MXAN_3398 FAD-dependent oxidoreductase YP_003186252.1 PFAM: conserved hypothetical protein; KEGG: eic:NT01EI_2385 hypothetical protein YP_003186253.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rlg:Rleg_5124 polar amino acid ABC transporter, inner membrane subunit YP_003186254.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: pfo:Pfl01_1807 zinc-containing alcohol dehydrogenase superfamily protein YP_003186256.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: afr:AFE_2089 hypothetical protein YP_003186258.1 KEGG: gbm:Gbem_0788 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003186259.1 PFAM: L-asparaginase II; KEGG: bgl:bglu_1g16530 L-asparaginase II YP_003186260.1 KEGG: abo:ABO_1262 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003186261.1 PFAM: glycoside hydrolase family 31; KEGG: scl:sce3449 Alpha-glucosidase family protein YP_003186262.1 PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: vfi:VF_2049 maltodextrin glucosidase YP_003186263.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ppu:PP_2457 ribose operon repressor YP_003186264.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpu:KP1_1304 putative binding-protein- dependent transport systems inner membrane component YP_003186265.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esa:ESA_03420 hypothetical protein YP_003186266.1 PFAM: extracellular solute-binding protein family 1; KEGG: efe:EFER_4126 maltose transporter subunit ; periplasmic-binding component of ABC superfamily YP_003186267.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ppr:PBPRA1726 maltodextrin glucosidase YP_003186268.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B1213 lipolytic protein YP_003186269.1 PFAM: Pirin domain protein; KEGG: Os03g0845000; hypothetical protein ; K06911 YP_003186270.1 PFAM: NUDIX hydrolase; KEGG: hypothetical protein YP_003186271.1 PFAM: regulatory protein ArsR; regulatory protein MarR; SMART: regulatory protein ArsR; KEGG: reu:Reut_A0234 ArsR family transcriptional regulator YP_003186272.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cbd:CBUD_0727 phosphate transporter YP_003186273.1 PFAM: protein of unknown function DUF979; KEGG: cti:RALTA_A0070 conserved hypothetical protein, DUF979; putative transmembrane protein YP_003186274.1 PFAM: protein of unknown function DUF969; KEGG: bmj:BMULJ_03978 predicted membrane protein YP_003186277.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: afw:Anae109_0227 gamma-glutamyl phosphate reductase YP_003186278.1 KEGG: geo:Geob_0607 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein YP_003186279.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: similar to MGC84259 protein YP_003186280.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides YP_003186281.1 PFAM: UspA domain protein; KEGG: dma:DMR_33160 putative universal stress protein YP_003186282.1 PFAM: extracellular solute-binding protein family 5; KEGG: oan:Oant_3599 extracellular solute-binding protein YP_003186283.1 PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: sml:Smlt2888 putative AraC family transcriptional regulator YP_003186284.1 PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: esa:ESA_03417 hypothetical protein YP_003186285.1 TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: dde:Dde_3492 ammonium transporter YP_003186286.1 PFAM: nitrogen regulatory protein P-II; KEGG: eic:NT01EI_0893 nitrogen regulatory protein P- II YP_003186287.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: ara:Arad_9457 alpha-L-arabinofuranosidase protein YP_003186288.1 PFAM: regulatory protein ArsR; regulatory protein MarR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein ArsR; KEGG: avi:Avi_5706 hypothetical protein YP_003186289.1 PFAM: 3-dehydroquinate synthase; KEGG: vap:Vapar_4002 glycerol-1-phosphate dehydrogenase (NAD(P)(+)) YP_003186290.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism YP_003186291.1 PFAM: class II aldolase/adducin family protein; KEGG: vsp:VS_II0142 L-ribulose-5-phosphate 4- epimerase YP_003186292.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate YP_003186293.1 TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ecx:EcHS_A4271 D-xylose transporter XylE YP_003186294.1 PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: eca:ECA3172 DNA-binding transcriptional regulator GalR YP_003186295.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vap:Vapar_0373 sugar ABC transporter YP_003186296.1 PFAM: inner-membrane translocator; KEGG: ara:Arad_8601 sugar ABC transporter YP_003186297.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2594 sugar ABC transporter, ATP- binding protein YP_003186298.1 PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: eca:ECA3172 DNA-binding transcriptional regulator GalR YP_003186299.1 PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll5688 hypothetical protein YP_003186300.1 PFAM: protein of unknown function DUF1680; KEGG: esa:ESA_03870 hypothetical protein YP_003186301.1 PFAM: nitroreductase; KEGG: hypothetical protein ; K07078 YP_003186302.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa0650 lincomycin resistance protein LmrB YP_003186303.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bqu:BQ10020 multidrug resistance protein VceA YP_003186304.1 PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: similar to DnaJ homology subfamily A member 5 ; K09506 DnaJ homolog, subfamily A, member 5 YP_003186305.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgl:bglu_2g06820 DltE YP_003186306.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: pmy:Pmen_0457 C4-dicarboxylate transporter/malic acid transport protein YP_003186307.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pap:PSPA7_6168 putative transcriptional regulator YP_003186308.1 PFAM: protein of unknown function DUF163; KEGG: scl:sce3674 hypothetical protein YP_003186309.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: nam:NAMH_0044 serine protease YP_003186310.1 PFAM: beta-lactamase domain protein; KEGG: dal:Dalk_4746 beta-lactamase domain protein YP_003186311.1 PFAM: Protein of unknown function YycH YP_003186312.1 PFAM: YycH family protein YP_003186313.1 KEGG: gme:Gmet_2694 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_003186314.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sat:SYN_00981 response regulator YP_003186315.1 KEGG: hypothetical protein YP_003186316.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: gsu:GSU0998 replicative DNA helicase YP_003186317.1 TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; KEGG: nis:NIS_0999 50S ribosomal protein L9 YP_003186320.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: sfu:Sfum_3187 ribosomal protein S18 YP_003186321.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pca:Pcar_0643 ssDNA-binding protein YP_003186322.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: nmu:Nmul_A1951 30S ribosomal protein S6 YP_003186323.1 TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related; KEGG: gsu:GSU0664 GTP-dependent nucleic acid- binding protein EngD YP_003186325.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: dma:DMR_20480 molybdopterin oxidoreductase YP_003186326.1 PFAM: protein of unknown function DUF951 YP_003186327.1 PFAM: MscS Mechanosensitive ion channel; KEGG: scl:sce1443 membrane channel protein YP_003186329.1 TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256 YP_003186331.1 PFAM: protein of unknown function DUF554; KEGG: gbm:Gbem_0274 protein of unknown function DUF554 YP_003186332.1 KEGG: dal:Dalk_3716 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003186333.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gsu:GSU0106 soj protein YP_003186334.1 KEGG: dat:HRM2_31880 putative chromosome partitioning protein ParB; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003186335.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: hypothetical protein ; K03501 glucose inhibited division protein B YP_003186336.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_003186337.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP- binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; Miro domain protein; KEGG: gsu:GSU3465 tRNA modification GTPase TrmE YP_003186338.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: sfu:Sfum_2598 single-stranded nucleic acid binding R3H domain protein YP_003186339.1 TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; KEGG: gsu:GSU3466 hypothetical protein YP_003186340.1 PFAM: protein of unknown function DUF37; KEGG: xcc:XCC2256 hypothetical protein YP_003186341.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: nis:NIS_0879 ribonuclease P protein component YP_003186342.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: mmw:Mmwyl1_4487 ribosomal protein L34 YP_003186343.1 KEGG: seh:SeHA_A0065 hypothetical protein YP_003186345.1 KEGG: sat:SYN_01838 putative cytoplasmic protein YP_003186346.1 PFAM: helix-turn-helix domain protein; Peptidase S24, S26A and S26B, conserved region; SMART: helix-turn-helix domain protein; KEGG: rec:RHECIAT_CH0002025 LexA repressor YP_003186355.1 KEGG: bba:Bd0111 Flp pilus assembly protein TadA YP_003186356.1 KEGG: eba:ebA3707 flp pilus assembly protein, ATPase YP_003186357.1 PFAM: SAF domain protein; KEGG: bba:Bd0113 putative flp pilus assembly protein CpaB YP_003186359.1 PFAM: Lytic transglycosylase catalytic; KEGG: oan:Oant_3191 lytic transglycosylase catalytic YP_003186360.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pau:PA14_63210 putative two-component response regulator YP_003186361.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: afe:Lferr_0168 hypothetical protein YP_003186364.1 KEGG: bte:BTH_II0957 outer membrane protein, putative YP_003186365.1 KEGG: see:SNSL254_p_0095 type IV conjugative transfer system protein TraC YP_003186371.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nmn:NMCC_1960 chromosome partitioning protein, ParA family protein YP_003186373.1 KEGG: glo:Glov_1425 hypothetical protein YP_003186374.1 PFAM: transposase IS66; KEGG: reu:Reut_C6337 transposase IS66 YP_003186375.1 PFAM: IS66 Orf2 family protein; KEGG: sbn:Sbal195_0639 IS66 Orf2 family protein YP_003186376.1 KEGG: dma:DMR_41530 putative transposase orf1 for insertion sequence element YP_003186379.1 PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: plu:plu0116 hypothetical protein YP_003186380.1 PFAM: major facilitator superfamily MFS_1; KEGG: dat:HRM2_40390 permease of the major facilitator superfamily YP_003186381.1 PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: similar to DEHA2D14190p YP_003186382.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: scl:sce5621 hypothetical protein YP_003186383.1 PFAM: cobalamin synthesis protein P47K; KEGG: vvu:VV2_0699 putative GTPase YP_003186386.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcs:BCAN_A1690 phosphinothricin N- acetyltransferase YP_003186387.1 PFAM: integrase family protein; KEGG: pub:SAR11_1019 integrase/recombinase XerD- like protein YP_003186388.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: sun:SUN_0699 hypothetical protein YP_003186390.1 KEGG: sec:SC108 putative YhgA-like transposase YP_003186391.1 KEGG: mlo:mll1436 hypothetical protein YP_003186395.1 KEGG: dat:HRM2_19390 hypothetical protein YP_003186396.1 PFAM: DNA repair protein RadC; KEGG: dat:HRM2_20680 RadC2 YP_003186397.1 KEGG: xac:XAC0002 DNA polymerase III subunit beta; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003186398.1 PFAM: Peptidoglycan-binding lysin domain YP_003186401.1 PFAM: SMC domain protein; KEGG: putative NUCLEAR PROTEIN OF THE SMC FAMILY YP_003186403.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pca:Pcar_0643 ssDNA-binding protein YP_003186404.1 KEGG: dvm:DvMF_1682 hypothetical protein YP_003186408.1 KEGG: esa:ESA_02838 hypothetical protein YP_003186409.1 KEGG: hch:HCH_06378 ATPase YP_003186410.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: eta:ETA_18470 inner membrane protein YdjM YP_003186411.1 KEGG: bph:Bphy_7610 hypothetical protein YP_003186412.1 PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: DEAD/DEAH box helicase; K01529 YP_003186413.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: pol:Bpro_1551 histone-like DNA-binding protein YP_003186415.1 PFAM: UvrD/REP helicase; KEGG: afr:AFE_3101 DNA helicase II YP_003186417.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: geo:Geob_3171 DNA-directed DNA polymerase YP_003186418.1 PFAM: YolD-like protein YP_003186423.1 PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: gsu:GSU0107 ParB-like nuclease domain- containing protein YP_003186424.1 TIGRFAM: transcriptional regulator, AbrB family YP_003186426.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003186429.1 KEGG: dal:Dalk_4977 hypothetical protein YP_003186431.1 KEGG: SPCPB16A4.07c; sequence orphan YP_003186433.1 KEGG: efe:EFER_0153 putative transposase YP_003186434.1 KEGG: plu:plu3546 ISNCY family transposase YP_003186435.1 KEGG: vsa:VSAL_I0039 transposase YP_003186438.1 KEGG: scl:sce8484 DNA binding protein YP_003186441.1 PFAM: Sigma-70 region 4 type 2; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; KEGG: afw:Anae109_2743 two component LuxR family transcriptional regulator YP_003186443.1 KEGG: dat:HRM2_44620 hypothetical protein YP_003186444.1 PFAM: IS66 Orf2 family protein; KEGG: sbn:Sbal195_0639 IS66 Orf2 family protein YP_003186446.1 PFAM: transposase IS4 family protein; KEGG: aeh:Mlg_1129 transposase, IS4 family protein YP_003186447.1 PFAM: transposase IS66; KEGG: pmy:Pmen_0160 transposase IS66 YP_003186448.1 PFAM: Ankyrin; SMART: Ankyrin; KEGG: similar to ankyrin 2,3/unc44 YP_003186449.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_0268 transposase IS4 family protein YP_003186450.1 KEGG: geo:Geob_0300 NHL repeat containing protein YP_003186451.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: abc:ACICU_03480 transcriptional regulator YP_003186452.1 PFAM: branched-chain amino acid transport; KEGG: reu:Reut_A0494 hypothetical protein YP_003186453.1 PFAM: AzlC family protein; KEGG: rpf:Rpic12D_0404 AzlC family protein YP_003186454.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: oca:OCAR_5414 protein PhnB YP_003186457.1 PFAM: GerA spore germination protein; KEGG: hypothetical protein YP_003186458.1 KEGG: hypothetical protein YP_003186460.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: hypothetical protein YP_003186462.1 SMART: Tetratricopeptide repeat; KEGG: vsp:VS_1673 GGDEF domain protein YP_003186463.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: dde:Dde_1628 diguanylate cyclase/phosphodiesterase YP_003186464.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: plu:plu0815 Two-component response regulator. hexose phosphate transport system regulatory protein UhpA YP_003186465.1 KEGG: hypothetical protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003186466.1 PFAM: TPR repeat-containing protein; metal- dependent phosphohydrolase HD sub domain; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: afw:Anae109_2904 histidine kinase YP_003186471.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gur:Gura_2740 DNA methylase N-4/N-6 domain- containing protein YP_003186472.1 PFAM: type III restriction protein res subunit; KEGG: gur:Gura_2739 hypothetical protein YP_003186473.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: mxa:MXAN_4662 RNA polymerase sigma factor YP_003186476.1 KEGG: ppr:PBPRA0381 hypothetical protein YP_003186477.1 PFAM: Sigma-70 region 4 type 2; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: spe:Spro_2900 transcriptional regulator NarL YP_003186478.1 KEGG: ade:Adeh_1121 peptidase M50, putative membrane-associated zinc metallopeptidase YP_003186481.1 KEGG: hypothetical protein LOC100147971 YP_003186485.1 PFAM: Pyrrolo-quinoline quinone; KEGG: ACAN; aggrecan ; K06792 aggrecan 1 YP_003186486.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: avi:Avi_3606 regulators of stationary/sporulation gene expression protein YP_003186487.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_3493 PilT domain-containing protein YP_003186489.1 PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: noc:Noc_3082 ParB-like partition protein YP_003186491.1 KEGG: hypothetical protein LOC100016138 YP_003186492.1 PFAM: BRO domain protein; KEGG: abm:ABSDF1019 putative prophage antirepressor YP_003186495.1 KEGG: rec:RHECIAT_CH0000373 hypothetical protein YP_003186497.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: cvi:CV_2461 hypothetical protein YP_003186500.1 KEGG: ajs:Ajs_4178 hypothetical protein YP_003186501.1 KEGG: proteophosphoglycan 5 YP_003186502.1 KEGG: spen; split ends YP_003186503.1 KEGG: lch:Lcho_0698 cobyrinic acid ac-diamide synthase YP_003186504.1 PFAM: SAF domain protein; KEGG: acp:A2cp1_3006 Flp pilus assembly protein CpaB YP_003186505.1 PFAM: type II secretion system protein E; KEGG: gbm:Gbem_1055 type II secretion system protein E YP_003186506.1 KEGG: rpf:Rpic12D_0544 type II secretion system protein YP_003186517.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: pen:PSEEN2864 IS256 family transposase YP_003186518.1 KEGG: bvi:Bcep1808_7387 StbA family protein YP_003186519.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: bvi:Bcep1808_3059 diguanylate cyclase/phosphodiesterase YP_003186524.1 KEGG: afw:Anae109_3967 Flp pilus assembly protein ATPase CpaE-like protein YP_003186525.1 PFAM: SAF domain protein; KEGG: MUC5B; mucin 5B, oligomeric mucus/gel-forming YP_003186526.1 PFAM: type II secretion system protein E; KEGG: smt:Smal_2323 type II secretion system protein E YP_003186527.1 KEGG: pst:PSPTO_4854 hypothetical protein YP_003186528.1 KEGG: bph:Bphy_4348 type II secretion system protein YP_003186530.1 KEGG: geo:Geob_2704 cytochrome c family protein YP_003186531.1 PFAM: peptidase A24A prepilin type IV; KEGG: nmu:Nmul_A2362 peptidase A24A, prepilin type IV YP_003186534.1 TIGRFAM: phage/plasmid primase, P4 family; KEGG: dvu:DVU2188 primase, putative YP_003186535.1 PFAM: BRO domain protein; KEGG: abm:ABSDF1019 putative prophage antirepressor