-- dump date 20140618_193730 -- class Genbank::CDS -- table cds_note -- id note YP_004123964.1 KEGG: pol:Bpro_5514 hypothetical protein YP_004123965.1 KEGG: pol:Bpro_5515 cobyrinic acid a,c-diamide synthase YP_004123966.1 KEGG: vei:Veis_3760 hypothetical protein YP_004123967.1 manually curated; KEGG: gga:423125 similar to scavenger receptor cysteine-rich type 1 protein CD163c-alpha YP_004123968.1 KEGG: dia:Dtpsy_1065 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004123969.1 KEGG: vap:Vapar_1795 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004123970.1 KEGG: cph:Cpha266_0558 Mg chelatase, subunit ChlI YP_004123971.1 KEGG: see:SNSL254_p_0066 type IV conjugative transfer system protein TraD YP_004123972.1 KEGG: pmr:PMI2473 plasmid-related protein YP_004123973.1 KEGG: afo:Afer_1731 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_004123974.1 KEGG: cqu:CpipJ_CPIJ000220 conserved oligomeric Golgi complex component 6 YP_004123975.1 PFAM: Lytic transglycosylase catalytic; KEGG: mpt:Mpe_B0379 invasion protein YP_004123976.1 KEGG: see:SNSL254_p_0093 hypothetical protein YP_004123977.1 KEGG: transcription initiation factor E subunit alpha YP_004123978.1 TIGRFAM: type IV conjugative transfer system protein TraL; KEGG: bvi:Bcep1808_6760 pilus assembly protein YP_004123979.1 KEGG: mpt:Mpe_B0365 sex pilus assembly protein YP_004123980.1 KEGG: mpt:Mpe_B0366 sex pilus assembly protein YP_004123981.1 KEGG: bvi:Bcep1808_6757 TraB pilus assembly family protein YP_004123982.1 KEGG: mpt:Mpe_B0369 sex pilus assembly protein; TIGRFAM: type IV conjugative transfer system protein TraV; PFAM: Type IV conjugative transfer system protein TraV YP_004123983.1 KEGG: bvi:Bcep1808_6755 hypothetical protein YP_004123984.1 TIGRFAM: type-IV secretion system protein TraC; KEGG: mpt:Mpe_B0371 F-pilin subunit assembly into extended F pili YP_004123985.1 KEGG: cli:Clim_1282 outer membrane efflux protein YP_004123986.1 KEGG: bvi:Bcep1808_6752 putative pilus assembly protein,TrhF (pilin signal peptidase); manually curated; PFAM: Peptidase S26, conserved region YP_004123987.1 PFAM: Type-F conjugative transfer system pilin assembly protein TrbC; KEGG: afr:AFE_1095 pilus assembly protein TraW, putative YP_004123988.1 PFAM: TraU family protein; KEGG: afr:AFE_1096 conjugal transfer protein TraU, putative YP_004123989.1 KEGG: pmr:PMI2456 mating pair stabilization protein YP_004123990.1 KEGG: pan:PODANSg9310 hypothetical protein YP_004123991.1 KEGG: bvi:Bcep1808_6751 sex pilus assembly protein YP_004123992.1 PFAM: TraH family protein; KEGG: bvi:Bcep1808_6750 TraH family protein YP_004123993.1 KEGG: cbr:CBG02561 Hypothetical protein CBG02561 YP_004123994.1 KEGG: dvl:Dvul_0954 Sel1 domain-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_004123995.1 KEGG: gfo:GFO_2422 hypothetical protein YP_004123996.1 KEGG: mpt:Mpe_A2996 putative transposase; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004123997.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_6160 integrase catalytic subunit YP_004123998.1 PFAM: Integrase catalytic region; regulatory protein MerR; KEGG: ctt:CtCNB1_2459 IstA YP_004123999.1 KEGG: ctt:CtCNB1_3734 IstB-like ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004124000.1 KEGG: pag:PLES_25131 hypothetical protein YP_004124001.1 KEGG: rme:Rmet_6231 hypothetical protein YP_004124003.1 KEGG: rfr:Rfer_4359 hypothetical protein YP_004124004.1 KEGG: scb:SCAB_16871 putative oxidoreductase YP_004124005.1 KEGG: rfr:Rfer_4370 hypothetical protein YP_004124006.1 KEGG: cbr:CBG23756 C. briggsae CBR-SIR-2.1 protein YP_004124007.1 KEGG: mpt:Mpe_B0157 hypothetical protein YP_004124009.1 KEGG: tkm:TK90_2628 hypothetical protein YP_004124010.1 KEGG: aba:Acid345_4350 2-oxoglutarate dehydrogenase E2 component YP_004124011.1 KEGG: ele:Elen_0894 hypothetical protein YP_004124012.1 KEGG: svi:Svir_02820 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II YP_004124013.1 KEGG: pna:Pnap_4210 hypothetical protein YP_004124014.1 KEGG: rfr:Rfer_4370 hypothetical protein YP_004124015.1 manually curated; KEGG: tin:Tint_1860 hypothetical protein YP_004124016.1 KEGG: tin:Tint_1861 hypothetical protein YP_004124017.1 manually curated; KEGG: rpf:Rpic12D_2831 hypothetical protein YP_004124018.1 manually curated; KEGG: reh:H16_B0351 hypothetical protein YP_004124019.1 PFAM: integrase family protein; KEGG: bmj:BMULJ_05815 tyrosine recombinase YP_004124020.1 KEGG: mth:MTH700 hypothetical protein YP_004124021.1 KEGG: mgr:MGG_03826 hypothetical protein YP_004124022.1 KEGG: bid:Bind_3528 AraC family transcriptional regulator YP_004124023.1 KEGG: rpf:Rpic12D_4799 hypothetical protein YP_004124024.1 KEGG: tmt:Tmath_0092 PKD domain containing protein YP_004124025.1 KEGG: rpf:Rpic12D_4785 hypothetical protein YP_004124026.1 KEGG: pna:Pnap_4409 hypothetical protein YP_004124027.1 KEGG: rpf:Rpic12D_4779 hypothetical protein YP_004124028.1 KEGG: rha:RHA1_ro03242 transcriptional regulator YP_004124030.1 KEGG: bxe:Bxe_A3093 hypothetical protein YP_004124031.1 KEGG: rer:RER_07640 ceramidase YP_004124032.1 KEGG: mvu:Metvu_1533 RNA polymerase RPB1 domain 5 YP_004124033.1 KEGG: cel:F49A5.6 THaumatiN family YP_004124034.1 KEGG: pjd:Pjdr2_4457 Ham1 family protein YP_004124035.1 KEGG: hch:HCH_04829 hypothetical protein YP_004124036.1 KEGG: bxe:Bxe_A3093 hypothetical protein YP_004124037.1 KEGG: bge:BC1002_4953 hypothetical protein YP_004124038.1 KEGG: mvu:Metvu_1533 RNA polymerase RPB1 domain 5 YP_004124039.1 KEGG: dia:Dtpsy_2523 transposase IS66 YP_004124040.1 PFAM: IS66 Orf2 family protein; KEGG: rfr:Rfer_2710 IS66 Orf2 like YP_004124041.1 PFAM: transposase IS3/IS911 family protein; KEGG: rfr:Rfer_2709 transposase IS3/IS911 YP_004124042.1 KEGG: ajs:Ajs_4213 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases like enzyme YP_004124043.1 KEGG: lbz:LbrM34_V2.1910 hypothetical protein YP_004124044.1 PFAM: peptidase S49; KEGG: eba:p1B184 periplasmic serine protease (ClpP class) YP_004124045.1 KEGG: aeh:Mlg_1551 hypothetical protein YP_004124046.1 KEGG: glo:Glov_1032 xanthine/uracil/vitamin C permease YP_004124047.1 KEGG: clu:CLUG_01384 hypothetical protein YP_004124048.1 PFAM: transposase Tn3 family protein; KEGG: aau:AAur_pTC10224 IS1071, transposase YP_004124049.1 PFAM: transposase Tn3 family protein; KEGG: rpf:Rpic12D_4478 transposase Tn3 family protein YP_004124050.1 KEGG: rme:Rmet_6342 antitoxin of a toxin/antitoxin system YP_004124051.1 KEGG: tin:Tint_3241 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_004124052.1 manually curated; KEGG: rme:Rmet_6340 hypothetical protein YP_004124053.1 KEGG: rme:Rmet_6339 cupin 2 conserved barrel domain-containing protein; manually curated; PFAM: Cupin 2 conserved barrel domain protein YP_004124054.1 KEGG: bgl:bglu_2p1110 hypothetical protein YP_004124055.1 KEGG: rfr:Rfer_3089 molybdopterin-guanine dinucleotide biosynthesis protein B; manually curated; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B YP_004124056.1 PFAM: cytochrome c class I; KEGG: rme:Rmet_3424 cytochrome c, class I YP_004124057.1 TIGRFAM: DMSO reductase family type II enzyme, heme b subunit; KEGG: hla:Hlac_1337 DMSO reductase family type II enzyme, heme B subunit; PFAM: Cytochrome c-552/DMSO reductase-like, haem-binding domain YP_004124058.1 KEGG: dol:Dole_0197 delta-subunit of ethylbenzene dehydrogenase; TIGRFAM: DMSO reductase family type II enzyme chaperone; PFAM: TorD-like chaperone YP_004124059.1 TIGRFAM: DMSO reductase family type II enzyme, iron-sulfur subunit; KEGG: pmx:PERMA_0658 respiratory nitrate reductase 1 beta chain (nitrate reductase A subunit beta) (quinol-nitrate oxidoreductase subunitbeta) YP_004124060.1 KEGG: pmx:PERMA_0657 dimethylsulfide dehydrogenase subunit alpha (dimethylsulfide dehydrogenase molybdenum subunit) (DMS DH alphasubunit) (DMS DH molybdenum subunit); TIGRFAM: DMSO reductase family type II enzyme, molybdopterin subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_004124061.1 KEGG: dar:Daro_2580 chlorite dismutase; manually curated; PFAM: Chlorite dismutase YP_004124062.1 TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: pol:Bpro_2731 hypothetical protein YP_004124063.1 KEGG: kpn:KPN_pKPN5p08243 hypothetical protein; manually curated; PFAM: Cupin 2 conserved barrel domain protein YP_004124064.1 PFAM: integrase family protein; KEGG: eba:p2A217 putative integrase YP_004124065.1 KEGG: bge:BC1002_7025 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase YP_004124066.1 PFAM: Integrase catalytic region; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A3740 putative transposase YP_004124067.1 PFAM: transposase Tn3 family protein; KEGG: aau:AAur_pTC10224 IS1071, transposase YP_004124068.1 PFAM: integrase family protein; KEGG: rpf:Rpic12D_5076 integrase family protein YP_004124069.1 KEGG: pna:Pnap_4414 hypothetical protein YP_004124070.1 KEGG: maq:Maqu_4078 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase YP_004124071.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: maq:Maqu_4077 DNA methylase N-4/N-6 domain-containing protein YP_004124072.1 PFAM: PemK family protein; KEGG: xcv:XCVc0002 putative PemK-like protein YP_004124073.1 KEGG: xcv:XCVc0003 hypothetical protein YP_004124074.1 PFAM: restriction endonuclease; DNA topoisomerase type IA zn finger domain protein; KEGG: eba:ebA67 hypothetical protein YP_004124075.1 KEGG: ajs:Ajs_1589 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004124076.1 KEGG: vap:Vapar_5860 transcriptional regulator, XRE family YP_004124077.1 KEGG: reu:Reut_A2370 hypothetical protein YP_004124078.1 PFAM: transposase Tn3 family protein; KEGG: aau:AAur_pTC10224 IS1071, transposase YP_004124079.1 KEGG: rme:Rmet_6339 cupin 2 conserved barrel domain-containing protein; manually curated; PFAM: Cupin 2 conserved barrel domain protein YP_004124080.1 KEGG: rme:Rmet_6340 hypothetical protein YP_004124081.1 KEGG: tin:Tint_3241 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_004124082.1 KEGG: rme:Rmet_6342 antitoxin of a toxin/antitoxin system YP_004124083.1 PFAM: Resolvase domain; KEGG: rpf:Rpic12D_4479 resolvase domain protein YP_004124084.1 PFAM: transposase Tn3 family protein; KEGG: aau:AAur_pTC10224 IS1071, transposase YP_004124085.1 manually curated; KEGG: alv:Alvin_3256 Wgr YP_004124086.1 KEGG: xca:xccb100_0185 cysteine desulfurase YP_004124087.1 KEGG: oan:Oant_2921 AraC family transcriptional regulator YP_004124088.1 PFAM: initiator RepB protein; KEGG: bmj:BMULJ_05362 replication protein YP_004124676.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: dia:Dtpsy_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_004124677.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: dia:Dtpsy_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_004124678.1 TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; KEGG: dia:Dtpsy_0003 DNA gyrase, B subunit; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_004124679.1 PFAM: protein of unknown function UPF0153; KEGG: dia:Dtpsy_0006 protein of unknown function UPF0153 YP_004124680.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_A2137 acyl-CoA transferase/carnitine dehydratase YP_004124681.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_A2138 enoyl-CoA hydratase/carnithine racemase YP_004124682.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reh:H16_A2139 LysR family transcriptional regulator YP_004124683.1 KEGG: reh:H16_A2140 extra-cytoplasmic solute receptor YP_004124684.1 PFAM: protein of unknown function DUF1446; KEGG: reh:H16_A2141 hypothetical protein YP_004124685.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: reh:H16_A2142 acetyl-CoA carboxylase alpha chain YP_004124686.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: reh:H16_A2143 acyl-CoA dehydrogenase, long-chain specific YP_004124687.1 KEGG: reh:H16_A2144 propionyl-CoA carboxylase beta chain; PFAM: carboxyl transferase YP_004124688.1 PFAM: acylphosphatase; KEGG: ajs:Ajs_4152 acylphosphatase YP_004124689.1 KEGG: ajs:Ajs_4153 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004124690.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: ajs:Ajs_4155 homoserine dehydrogenase YP_004124691.1 SMART: helicase c2; DEAD-like helicase; KEGG: ajs:Ajs_4158 ATP-dependent DNA helicase DinG YP_004124692.1 PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: ajs:Ajs_4160 DNA polymerase III, epsilon subunit; SMART: Exonuclease YP_004124693.1 PFAM: NLP/P60 protein; KEGG: ajs:Ajs_0001 NLP/P60 protein YP_004124694.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ajs:Ajs_0002 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004124695.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; KEGG: dia:Dtpsy_0021 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein YP_004124696.1 KEGG: dia:Dtpsy_0022 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004124697.1 KEGG: ajs:Ajs_0005 hypothetical protein YP_004124698.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpt:Bpet3280 hypothetical protein YP_004124699.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpt:Bpet3281 acyl-CoA dehydrogenase YP_004124700.1 KEGG: bpt:Bpet3282 secreted protein YP_004124701.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; CoA-binding domain protein; KEGG: rme:Rmet_0842 CoA-binding YP_004124702.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rme:Rmet_0841 enoyl-CoA hydratase YP_004124703.1 KEGG: bpt:Bpet3285 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004124704.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: dia:Dtpsy_0024 hypothetical protein YP_004124705.1 KEGG: ajs:Ajs_0007 hypothetical protein YP_004124706.1 PFAM: exonuclease RdgC; KEGG: ajs:Ajs_0008 recombination associated protein YP_004124707.1 PFAM: nucleoside recognition domain protein; KEGG: ajs:Ajs_0012 nucleoside recognition domain-containing protein YP_004124708.1 KEGG: dia:Dtpsy_0031 hypothetical protein YP_004124709.1 KEGG: blt:Balat_0053 beta-galactosidase I YP_004124710.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: dia:Dtpsy_0035 transcriptional regulator, MerR family; SMART: regulatory protein MerR YP_004124711.1 PFAM: Heavy metal transport/detoxification protein; KEGG: dia:Dtpsy_0036 heavy metal transport/detoxification protein YP_004124712.1 KEGG: dia:Dtpsy_0037 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004124713.1 KEGG: ajs:Ajs_0020 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004124714.1 KEGG: aav:Aave_0038 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_004124715.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: aav:Aave_0039 RND family efflux transporter MFP subunit YP_004124716.1 PFAM: outer membrane efflux protein; KEGG: aav:Aave_0040 outer membrane efflux protein YP_004124717.1 KEGG: aav:Aave_0041 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004124718.1 KEGG: aav:Aave_0042 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two-component sensor kinase domain-containing protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004124719.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: dia:Dtpsy_0040 NADH:flavin oxidoreductase/NADH oxidase YP_004124720.1 PFAM: Glutathione S-transferase domain; KEGG: dia:Dtpsy_0042 glutathione S-transferase domain protein YP_004124721.1 PFAM: protein of unknown function UPF0153; KEGG: dia:Dtpsy_0043 protein of unknown function UPF0153 YP_004124722.1 PFAM: NADPH-dependent FMN reductase; KEGG: dia:Dtpsy_0044 NADPH-dependent FMN reductase YP_004124723.1 manually curated; TIGRFAM: glucose inhibited division protein A; KEGG: dia:Dtpsy_0045 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: glucose-inhibited division protein A YP_004124724.1 KEGG: pct:PC1_0787 hypothetical protein YP_004124725.1 KEGG: dia:Dtpsy_0046 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_004124726.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dia:Dtpsy_0047 lysine exporter protein (LysE/YggA) YP_004124727.1 KEGG: dia:Dtpsy_0048 cobyrinic acid ac-diamide synthase YP_004124728.1 PFAM: protein of unknown function DUF1234; KEGG: ajs:Ajs_0030 hypothetical protein YP_004124729.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: aav:Aave_0056 chromosome segregation DNA-binding protein; SMART: ParB domain protein nuclease YP_004124730.1 KEGG: ajs:Ajs_0032 methyltransferase type 12 YP_004124731.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: dia:Dtpsy_0052 peptidoglycan-binding domain 1 protein YP_004124732.1 SMART: Helix-turn-helix, AraC domain; KEGG: dia:Dtpsy_0054 transcriptional regulator, AraC family YP_004124733.1 PFAM: major facilitator superfamily MFS_1; KEGG: dia:Dtpsy_0055 major facilitator superfamily MFS_1 YP_004124734.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bpy:Bphyt_0752 MscS mechanosensitive ion channel YP_004124736.1 PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0040 fis family transcriptional regulator YP_004124737.1 KEGG: shi:Shel_23880 hypothetical protein YP_004124738.1 KEGG: rsq:Rsph17025_2099 phage virion morphogenesis protein YP_004124739.1 PFAM: head morphogenesis protein SPP1 gp7; KEGG: bpt:Bpet4409 F protein (gpF) (protein GP30) YP_004124740.1 PFAM: protein of unknown function DUF935; KEGG: rsc:RCFBP_11714 hypothetical protein YP_004124741.1 KEGG: rce:RC1_1112 terminase large subunit YP_004124742.1 KEGG: bps:BPSL1153 hypothetical protein YP_004124743.1 KEGG: cvi:CV_2153 hypothetical protein YP_004124744.1 KEGG: aav:Aave_4097 hypothetical protein YP_004124745.1 KEGG: pna:Pnap_2245 hypothetical protein YP_004124746.1 KEGG: scl:sce2651 carbohydrate ABC transporter YP_004124747.1 KEGG: aav:Aave_4094 hypothetical protein YP_004124748.1 KEGG: aav:Aave_4093 hypothetical protein YP_004124749.1 KEGG: pna:Pnap_2241 hypothetical protein YP_004124750.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: aav:Aave_4108 D12 class N6 adenine-specific DNA methyltransferase YP_004124751.1 TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: dia:Dtpsy_0063 ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_004124752.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0044 hypothetical protein YP_004124753.1 TIGRFAM: succinate CoA transferase; KEGG: ajs:Ajs_0046 acetyl-CoA hydrolase; PFAM: acetyl-CoA hydrolase/transferase YP_004124754.1 KEGG: dia:Dtpsy_0067 hypothetical protein YP_004124755.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_5369 LysR family transcriptional regulator YP_004124756.1 KEGG: reu:Reut_B4598 hypothetical protein YP_004124757.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB2766 short chain dehydrogenase YP_004124758.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_0736 short-chain dehydrogenase/reductase SDR YP_004124759.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase YP_004124760.1 KEGG: ajs:Ajs_0048 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004124761.1 TIGRFAM: methyltransferase FkbM family; KEGG: sna:Snas_6312 methyltransferase FkbM family YP_004124762.1 KEGG: ajs:Ajs_0052 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding YP_004124763.1 KEGG: dia:Dtpsy_0074 acetoacetyl-CoA synthetase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase YP_004124764.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_0055 LysR family transcriptional regulator YP_004124765.1 KEGG: ajs:Ajs_0056 hypothetical protein YP_004124766.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_0061 acyl-CoA dehydrogenase domain-containing protein YP_004124767.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_0062 acyl-CoA dehydrogenase domain-containing protein YP_004124768.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_0063 enoyl-CoA hydratase YP_004124769.1 manually curated; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; KEGG: dia:Dtpsy_0083 CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004124770.1 manually curated; TIGRFAM: TonB-dependent siderophore receptor; KEGG: neu:NE2433 TonB-dependent receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004124771.1 KEGG: neu:NE2432 hypothetical protein YP_004124772.1 KEGG: rpt:Rpal_2080 hypothetical protein YP_004124773.1 KEGG: dia:Dtpsy_0084 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC YP_004124774.1 TIGRFAM: septum site-determining protein MinD; KEGG: dia:Dtpsy_0085 septum site-determining protein MinD YP_004124775.1 KEGG: dia:Dtpsy_0086 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE YP_004124776.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pna:Pnap_1015 LysR family transcriptional regulator YP_004124777.1 KEGG: pol:Bpro_4513 hypothetical protein YP_004124778.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mes:Meso_4537 galactonate dehydratase YP_004124779.1 KEGG: ajs:Ajs_0068 flavin reductase domain-containing protein; manually curated; PFAM: flavin reductase domain protein FMN-binding YP_004124780.1 PFAM: alpha/beta hydrolase fold; KEGG: dia:Dtpsy_0088 alpha/beta hydrolase fold protein YP_004124781.1 PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0073 TetR family transcriptional regulator YP_004124782.1 PFAM: UspA domain-containing protein; KEGG: ajs:Ajs_0074 UspA domain-containing protein YP_004124783.1 PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0075 metallophosphoesterase YP_004124784.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_0076 LysR family transcriptional regulator YP_004124785.1 KEGG: ajs:Ajs_0077 hypothetical protein YP_004124786.1 KEGG: dac:Daci_0114 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (GTP) YP_004124787.1 KEGG: dia:Dtpsy_0098 hypothetical protein YP_004124788.1 KEGG: dia:Dtpsy_0099 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein YP_004124789.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain-containing protein YP_004124790.1 KEGG: pfl:PFL_4078 magnesium-transporting ATPase MgtA; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004124791.1 PFAM: homocysteine S-methyltransferase; KEGG: ajs:Ajs_0083 methionine synthase (B12-dependent) YP_004124792.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_0175 LysR family transcriptional regulator YP_004124793.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: aav:Aave_0176 acyl-CoA dehydrogenase domain-containing protein YP_004124794.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: aav:Aave_0177 cupin 2 domain-containing protein YP_004124795.1 KEGG: aav:Aave_0180 hypothetical protein YP_004124796.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; helicase domain protein; DEAD/DEAH box helicase domain protein; HRDC domain protein; KEGG: dia:Dtpsy_0103 ATP-dependent DNA helicase RecQ; SMART: helicase domain protein; DEAD-like helicase ; HRDC domain protein YP_004124797.1 KEGG: ajs:Ajs_0085 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein YP_004124798.1 KEGG: dia:Dtpsy_0105 hypothetical protein YP_004124799.1 KEGG: dia:Dtpsy_0106 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein YP_004124800.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: ajs:Ajs_0088 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_004124801.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dia:Dtpsy_0108 hemerythrin HHE cation binding domain-containing protein YP_004124802.1 KEGG: dia:Dtpsy_0109 nitric oxide reductase large subunit YP_004124803.1 KEGG: dia:Dtpsy_0110 anaerobic nitric oxide reductase transcription regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004124804.1 KEGG: ctt:CtCNB1_2843 hypothetical protein YP_004124805.1 TIGRFAM: L-serine dehydratase 1; KEGG: dia:Dtpsy_0112 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004124806.1 KEGG: dia:Dtpsy_0114 hypothetical protein YP_004124807.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0098 AMP-dependent synthetase and ligase YP_004124808.1 KEGG: ajs:Ajs_0099 hypothetical protein YP_004124809.1 PFAM: thioesterase superfamily protein; KEGG: dia:Dtpsy_0117 thioesterase superfamily protein YP_004124810.1 KEGG: dia:Dtpsy_0118 hypothetical protein YP_004124811.1 KEGG: dia:Dtpsy_0119 hypothetical protein YP_004124812.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain-containing protein YP_004124813.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0104 AMP-dependent synthetase and ligase YP_004124814.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: dia:Dtpsy_0122 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004124815.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_0106 short-chain dehydrogenase/reductase SDR YP_004124816.1 KEGG: dia:Dtpsy_0125 hypothetical protein YP_004124817.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_0109 short-chain dehydrogenase/reductase SDR YP_004124819.1 KEGG: dia:Dtpsy_0128 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004124820.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0112 L-carnitine dehydratase/bile acid-inducible protein F YP_004124821.1 KEGG: reh:H16_B1448 extra-cytoplasmic solute receptor YP_004124822.1 PFAM: protein of unknown function DUF35; KEGG: reh:H16_A2147 hypothetical protein YP_004124823.1 KEGG: reh:H16_A2148 acetyl-CoA acetyltransferase YP_004124824.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: reh:H16_A2149 acyl-CoA dehydrogenase, long-chain specific YP_004124825.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_A2150 long-chain-fatty-acid--CoA ligase YP_004124826.1 KEGG: reh:H16_A2151 acyl dehydratase; PFAM: MaoC domain protein dehydratase YP_004124827.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_A2152 short chain dehydrogenase YP_004124828.1 KEGG: reh:H16_A2153 extra-cytoplasmic solute receptor YP_004124829.1 KEGG: reh:H16_A2154 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004124830.1 KEGG: ajs:Ajs_0113 major facilitator superfamily transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_004124831.1 KEGG: dia:Dtpsy_0131 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase YP_004124832.1 KEGG: ajs:Ajs_3918 transposase, IS4 family protein; manually curated; PFAM: transposase IS4 family protein YP_004124833.1 PFAM: MmgE/PrpD family protein; KEGG: dia:Dtpsy_0134 MmgE/PrpD family protein YP_004124834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F YP_004124835.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dac:Daci_0198 acyl-CoA dehydrogenase domain-containing protein YP_004124836.1 KEGG: dia:Dtpsy_0137 hypothetical protein YP_004124837.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_0138 short-chain dehydrogenase/reductase SDR YP_004124838.1 KEGG: ajs:Ajs_0121 dehydratase; PFAM: MaoC domain protein dehydratase YP_004124839.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dia:Dtpsy_0140 enoyl-CoA hydratase/isomerase YP_004124840.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: ajs:Ajs_0123 acetyl-CoA hydrolase/transferase YP_004124841.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ajs:Ajs_0124 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004124842.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_0188 LysR family transcriptional regulator YP_004124843.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: dac:Daci_0189 L-carnitine dehydratase/bile acid-inducible protein F YP_004124844.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_0190 alcohol dehydrogenase YP_004124845.1 KEGG: dac:Daci_0191 hypothetical protein YP_004124846.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_3679 LysR family transcriptional regulator YP_004124847.1 KEGG: aav:Aave_3678 hypothetical protein YP_004124848.1 TIGRFAM: amidohydrolase; KEGG: aav:Aave_3677 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004124849.1 KEGG: ajs:Ajs_0125 hypothetical protein YP_004124850.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dia:Dtpsy_0144 AMP-dependent synthetase and ligase YP_004124851.1 KEGG: dia:Dtpsy_0145 hypothetical protein YP_004124852.1 KEGG: reh:H16_B1474 extra-cytoplasmic solute receptor YP_004124853.1 PFAM: peptidase M20; peptidase dimerisation domain protein; manually curated; KEGG: reu:Reut_B4300 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase YP_004124854.1 PFAM: protein of unknown function DUF35; KEGG: ajs:Ajs_0128 hypothetical protein YP_004124855.1 KEGG: ajs:Ajs_0129 thiolase YP_004124856.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_0148 acyl-CoA dehydrogenase domain protein YP_004124857.1 PFAM: thioesterase superfamily protein; KEGG: dac:Daci_0175 thioesterase superfamily protein YP_004124858.1 KEGG: vei:Veis_2216 regulatory proteins, IclR; PFAM: regulatory protein IclR; SMART: regulatory protein IclR YP_004124859.1 PFAM: Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: vei:Veis_2212 hypothetical protein YP_004124860.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vei:Veis_2211 short-chain dehydrogenase/reductase SDR YP_004124861.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: reu:Reut_B5206 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal YP_004124862.1 KEGG: reu:Reut_B4463 propionyl-CoA carboxylase; PFAM: carboxyl transferase YP_004124863.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: reu:Reut_B4462 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal YP_004124864.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vei:Veis_2207 enoyl-CoA hydratase/isomerase YP_004124865.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: reu:Reut_B4460 carbamoyl-phosphate synthase subunit L YP_004124866.1 PFAM: protein of unknown function DUF1446; KEGG: reu:Reut_B4459 hypothetical protein YP_004124867.1 KEGG: reu:Reut_B4458 hypothetical protein YP_004124868.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2206 L-carnitine dehydratase/bile acid-inducible protein F YP_004124869.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_0150 transcriptional regulator, LysR family YP_004124870.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: dia:Dtpsy_0151 L-carnitine dehydratase/bile acid-inducible protein F YP_004124871.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctt:CtCNB1_0218 transcriptional regulator, LysR family YP_004124872.1 KEGG: ctt:CtCNB1_0219 twin-arginine translocation pathway signal YP_004124873.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F YP_004124874.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: dia:Dtpsy_0153 Glu/Leu/Phe/Val dehydrogenase YP_004124875.1 PFAM: transmembrane pair domain-containing protein; KEGG: dia:Dtpsy_0156 transmembrane pair domain protein YP_004124876.1 TIGRFAM: methionine synthase; KEGG: dac:Daci_0232 methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_004124877.1 TIGRFAM: CRISPR-associated protein, Csn1 family; KEGG: vei:Veis_1230 CRISPR-associated endonuclease Csn1 family protein YP_004124878.1 KEGG: vei:Veis_1231 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_004124879.1 KEGG: vei:Veis_1232 CRISPR-associated Cas2 family protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: Virulence-associated protein D / CRISPR associated protein Cas2 YP_004124880.1 PFAM: conjugation TrbI family protein; KEGG: ajs:Ajs_2902 conjugation TrbI family protein YP_004124881.1 KEGG: ajs:Ajs_2903 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX YP_004124882.1 KEGG: rpi:Rpic_2651 conjugal transfer protein TrbF YP_004124883.1 KEGG: ajs:Ajs_2905 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein YP_004124884.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: ajs:Ajs_2907 conjugal transfer protein TrbJ YP_004124885.1 KEGG: ajs:Ajs_2908 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase YP_004124886.1 KEGG: ajs:Ajs_2909 conjugal transfer TrbD transmembrane protein YP_004124887.1 PFAM: Conjugal transfer protein TrbC; KEGG: dac:Daci_2698 conjugal transfer protein TrbC YP_004124888.1 KEGG: ajs:Ajs_2911 type II secretion system protein E; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E YP_004124889.1 KEGG: ajs:Ajs_2912 CopG/DNA-binding domain-containing protein YP_004124890.1 PFAM: TRAG family protein; KEGG: dac:Daci_2701 conjugal transfer coupling protein TraG YP_004124891.1 KEGG: bmj:BMULJ_00894 probable lipoprotein YP_004124892.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sml:Smlt1302 LysR family transcriptional regulator YP_004124893.1 KEGG: ajs:Ajs_1849 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_004124894.1 KEGG: ajs:Ajs_1848 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004124895.1 PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_1847 outer membrane efflux protein YP_004124896.1 manually curated; KEGG: dar:Daro_2621 hypothetical protein YP_004124897.1 KEGG: ajs:Ajs_2700 hypothetical protein YP_004124898.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: dia:Dtpsy_2215 two component heavy metal response transcriptional regulator, winged helix family; SMART: response regulator receiver YP_004124899.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: dia:Dtpsy_2216 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004124900.1 KEGG: ara:Arad_2530 transporter YP_004124901.1 manually curated; KEGG: sfr:Sfri_3475 hypothetical protein YP_004124902.1 KEGG: vap:Vapar_3562 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004124903.1 SMART: regulatory protein MerR; manually curated; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; KEGG: mpt:Mpe_A1657 transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR YP_004124904.1 KEGG: dac:Daci_0453 hypothetical protein YP_004124905.1 manually curated; KEGG: sml:Smlt1309 hypothetical protein YP_004124906.1 PFAM: Peptidase S26, conserved region; KEGG: dia:Dtpsy_1292 TraF peptidase. Serine peptidase. MEROPS family S26C YP_004124907.1 KEGG: dia:Dtpsy_3522 hypothetical protein YP_004124908.1 KEGG: aav:Aave_0688 hypothetical protein YP_004124909.1 KEGG: tgr:Tgr7_1879 cobyrinic acid ac-diamide synthase YP_004124910.1 PFAM: Replication initiator protein A; KEGG: dac:Daci_2721 replication initiator and transcription repressor protein YP_004124911.1 KEGG: ajs:Ajs_2652 hypothetical protein YP_004124912.1 KEGG: ajs:Ajs_2651 hypothetical protein YP_004124913.1 KEGG: dia:Dtpsy_3529 lipoprotein YP_004124914.1 KEGG: dia:Dtpsy_3530 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004124915.1 PFAM: protein of unknown function DUF736; KEGG: aav:Aave_0681 hypothetical protein YP_004124916.1 KEGG: rpc:RPC_3544 phage associated protein YP_004124917.1 PFAM: RelA/SpoT domain protein; KEGG: rpc:RPC_3545 RelA/SpoT YP_004124918.1 KEGG: dac:Daci_2732 hypothetical protein YP_004124919.1 KEGG: dia:Dtpsy_3534 ParB domain protein nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_004124920.1 KEGG: ajs:Ajs_2944 hypothetical protein YP_004124921.1 KEGG: hse:Hsero_2905 hypothetical protein YP_004124922.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: hse:Hsero_2904 XRE family transcription regulator protein; SMART: helix-turn-helix domain protein YP_004124923.1 KEGG: rme:Rmet_1473 retron reverse transcriptase YP_004124924.1 KEGG: ajs:Ajs_2957 transcriptional regulator YP_004124925.1 KEGG: bpr:GBP346_A0938 probable addiction module killer protein; TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891 YP_004124926.1 PFAM: integrase family protein; KEGG: ajs:Ajs_2959 phage integrase family protein YP_004124927.1 KEGG: dia:Dtpsy_0168 shikimate kinase; PFAM: shikimate kinase YP_004124928.1 PFAM: ribonuclease BN; KEGG: ajs:Ajs_0151 ribonuclease BN YP_004124929.1 KEGG: ajs:Ajs_0152 17 kDa surface antigen YP_004124930.1 KEGG: ajs:Ajs_0153 ferredoxin--NADP(+) reductase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein YP_004124931.1 PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_0172 extracellular ligand-binding receptor YP_004124932.1 PFAM: inner-membrane translocator; KEGG: ajs:Ajs_0155 inner-membrane translocator YP_004124933.1 KEGG: vei:Veis_0860 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004124934.1 KEGG: kpe:KPK_1160 peptidoglycan binding domain/papain family cysteine protease; PFAM: peptidase C1A papain; SMART: peptidase C1A papain YP_004124935.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: dia:Dtpsy_0179 Mg chelatase, subunit ChlI; SMART: AAA ATPase YP_004124936.1 PFAM: Conserved hypothetical protein CHP02001; KEGG: dia:Dtpsy_0180 hypothetical protein YP_004124937.1 PFAM: nitrogen regulatory protein P-II; KEGG: aav:Aave_0233 nitrogen regulatory protein P-II YP_004124938.1 KEGG: ajs:Ajs_0164 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004124939.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_5424 LysR family transcriptional regulator YP_004124940.1 KEGG: rme:Rmet_4431 6-phosphogluconate dehydrogenase, NAD-binding; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004124941.1 PFAM: Aldehyde Dehydrogenase; KEGG: amd:AMED_3840 succinate-semialdehyde dehydrogenase (NADP+) YP_004124942.1 KEGG: bbr:BB3069 hypothetical protein YP_004124943.1 KEGG: mrd:Mrad2831_3256 beta-lactamase domain-containing protein YP_004124944.1 KEGG: reu:Reut_B3887 UreA/short-chain amide ABC transporter YP_004124945.1 KEGG: esa:ESA_04058 hypothetical protein; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004124946.1 PFAM: alpha/beta hydrolase fold; KEGG: msm:MSMEG_2534 carboxylesterase protein YP_004124947.1 KEGG: tcu:Tcur_0017 hypothetical protein YP_004124948.1 KEGG: vap:Vapar_4786 membrane protein AbrB duplication; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase YP_004124949.1 PFAM: MmgE/PrpD family protein; KEGG: vei:Veis_3318 MmgE/PrpD family protein YP_004124950.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rme:Rmet_5425 butyryl-CoA dehydrogenase YP_004124951.1 KEGG: vei:Veis_3320 hypothetical protein YP_004124952.1 PFAM: CoA-binding domain protein; KEGG: dac:Daci_1885 CoA-binding domain-containing protein YP_004124953.1 PFAM: FAD linked oxidase domain protein; KEGG: dia:Dtpsy_0184 FAD linked oxidase domain protein YP_004124954.1 PFAM: protein of unknown function DUF1275; KEGG: dia:Dtpsy_0185 protein of unknown function DUF1275 YP_004124955.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ajs:Ajs_0168 glycolate oxidase iron-sulfur subunit YP_004124956.1 PFAM: Fertility inhibition FinO-like; KEGG: dia:Dtpsy_0187 ProQ activator of osmoprotectant transporter ProP YP_004124957.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0174 hypothetical protein YP_004124958.1 PFAM: major facilitator superfamily MFS_1; KEGG: dia:Dtpsy_0193 lysophospholipid transporter LplT YP_004124959.1 TIGRFAM: alanine racemase; KEGG: ajs:Ajs_0176 alanine racemase; PFAM: alanine racemase domain protein YP_004124960.1 KEGG: dia:Dtpsy_0196 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase YP_004124961.1 PFAM: Glutathione S-transferase domain; KEGG: dia:Dtpsy_0197 glutathione S-transferase domain protein YP_004124962.1 KEGG: dia:Dtpsy_0199 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_004124963.1 KEGG: rme:Rmet_1769 hypothetical protein YP_004124964.1 PFAM: Amidase; KEGG: reh:H16_A1882 Asp-tRNA Asn / Glu-tRNA Gln amidotransferase A subunit or related amidase YP_004124965.1 KEGG: ajs:Ajs_0181 hypothetical protein YP_004124966.1 KEGG: ajs:Ajs_0182 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_004124967.1 PFAM: Zinc finger, CHCC-type; KEGG: ajs:Ajs_0183 hypothetical protein YP_004124968.1 PFAM: O-antigen polymerase; KEGG: ajs:Ajs_0184 O-antigen polymerase YP_004124969.1 PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_0185 glycosyl transferase, group 1 YP_004124970.1 PFAM: glycosyl transferase family 2; KEGG: ajs:Ajs_0186 glycosyl transferase family protein YP_004124971.1 KEGG: ajs:Ajs_0187 hypothetical protein YP_004124972.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_0188 2-nitropropane dioxygenase, NPD YP_004124973.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_0189 LysR family transcriptional regulator YP_004124974.1 KEGG: dia:Dtpsy_0209 protein of unknown function DUF1228 YP_004124975.1 PFAM: MOSC domain containing protein; KEGG: dia:Dtpsy_0210 MOSC domain containing protein YP_004124976.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dia:Dtpsy_0211 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004124977.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: oca:OCAR_5014 activator of HSP90 ATPase 1 family protein YP_004124978.1 PFAM: MaoC domain protein dehydratase; KEGG: dac:Daci_0013 dehydratase YP_004124979.1 KEGG: dac:Daci_0012 hypothetical protein YP_004124980.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_0011 LysR family transcriptional regulator YP_004124981.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: dac:Daci_0010 L-carnitine dehydratase/bile acid-inducible protein F YP_004124982.1 KEGG: dia:Dtpsy_0212 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004124983.1 KEGG: ajs:Ajs_0194 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004124984.1 PFAM: major facilitator superfamily MFS_1; KEGG: dia:Dtpsy_0214 major facilitator superfamily MFS_1 YP_004124985.1 KEGG: dia:Dtpsy_0215 transcriptional regulator, AraC family; PFAM: Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_004124986.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0201 hypothetical protein YP_004124987.1 PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_0203 peptidase M48, Ste24p YP_004124988.1 KEGG: ajs:Ajs_0204 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_004124989.1 KEGG: lch:Lcho_3364 sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; Activator of aromatic catabolism; 4-vinyl reductase 4VR; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004124990.1 PFAM: Phenol hydroxylase subunit; KEGG: avn:Avin_30760 multi-component phenol hydoxylase, assembly subunit; LapK YP_004124991.1 KEGG: azo:azo2443 phenol hydroxylase, subunit P1; PFAM: methane/phenol/toluene hydroxylase YP_004124992.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: azo:azo2442 phenol hydrolase, subunit P2 YP_004124993.1 PFAM: methane/phenol/toluene hydroxylase; YHS domain-containing protein; KEGG: azo:azo2441 phenol hydroxylase, subunit P3 YP_004124994.1 PFAM: Phenol hydroxylase conserved region; KEGG: rpf:Rpic12D_3551 phenol hydroxylase conserved region YP_004124995.1 PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: azo:azo1850 phenol 2-monooxygenase YP_004124996.1 PFAM: ferredoxin; KEGG: ajs:Ajs_0217 ferredoxin YP_004124997.1 KEGG: ajs:Ajs_0218 catechol 2,3-dioxygenase; TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004124998.1 PFAM: protein of unknown function DUF336; KEGG: ajs:Ajs_0219 hypothetical protein YP_004124999.1 KEGG: ctt:CtCNB1_3154 ZorfX YP_004125000.1 KEGG: ajs:Ajs_0220 betaine-aldehyde dehydrogenase; TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004125001.1 PFAM: alpha/beta hydrolase fold; KEGG: ctt:CtCNB1_3150 alpha/beta hydrolase fold protein YP_004125002.1 TIGRFAM: 2-oxopent-4-enoate hydratase; KEGG: ajs:Ajs_0222 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004125003.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: ajs:Ajs_0223 acetaldehyde dehydrogenase; PFAM: Acetaldehyde dehydrogenase ; Semialdehyde dehydrogenase NAD - binding YP_004125004.1 KEGG: ajs:Ajs_0224 4-hydroxy-2-ketovalerate aldolase; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein YP_004125005.1 TIGRFAM: 4-oxalocrotonate decarboxylase; KEGG: ajs:Ajs_0225 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004125006.1 KEGG: ctt:CtCNB1_3145 twin-arginine translocation pathway signal YP_004125007.1 KEGG: ajs:Ajs_0227 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_004125008.1 KEGG: ajs:Ajs_0228 beta-lactamase domain-containing protein YP_004125009.1 KEGG: dac:Daci_4281 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004125010.1 KEGG: dac:Daci_4280 hypothetical protein YP_004125011.1 PFAM: amidohydrolase 2; KEGG: dac:Daci_4279 amidohydrolase 2 YP_004125012.1 KEGG: dac:Daci_4278 hypothetical protein YP_004125013.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_4277 dimethylmenaquinone methyltransferase YP_004125014.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: vap:Vapar_5586 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004125015.1 KEGG: vap:Vapar_3894 hypothetical protein YP_004125016.1 KEGG: dac:Daci_4274 hypothetical protein YP_004125017.1 PFAM: amidohydrolase 2; KEGG: dac:Daci_4273 amidohydrolase 2 YP_004125018.1 PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: dac:Daci_4272 SMP-30/gluconolaconase/LRE domain-containing protein YP_004125019.1 KEGG: rme:Rmet_4433 extra-cytoplasmic solute receptor YP_004125020.1 KEGG: vei:Veis_2089 6-phosphogluconate dehydrogenase, NAD-binding; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004125021.1 PFAM: Aldehyde Dehydrogenase; KEGG: vei:Veis_2088 betaine-aldehyde dehydrogenase YP_004125022.1 KEGG: rme:Rmet_4432 IclR family transcriptional regulator family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004125023.1 KEGG: tcu:Tcur_0017 hypothetical protein YP_004125024.1 PFAM: alpha/beta hydrolase fold; KEGG: msm:MSMEG_2534 carboxylesterase protein YP_004125025.1 PFAM: Extracellular ligand-binding receptor; KEGG: bav:BAV0983 ABC transporter, substrate-binding protein YP_004125026.1 PFAM: inner-membrane translocator; KEGG: bav:BAV0982 ABC transporter, permease protein YP_004125027.1 PFAM: inner-membrane translocator; KEGG: dma:DMR_11370 ABC transporter permease protein YP_004125028.1 KEGG: pth:PTH_2348 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125029.1 KEGG: oan:Oant_4420 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125030.1 PFAM: amidohydrolase 2; KEGG: bbr:BB2353 hypothetical protein YP_004125031.1 KEGG: ajs:Ajs_0229 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_004125032.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_0230 acyl-CoA dehydrogenase domain-containing protein YP_004125033.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_0225 short-chain dehydrogenase/reductase SDR YP_004125034.1 PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_0232 aminoglycoside phosphotransferase YP_004125035.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: dia:Dtpsy_0227 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_004125036.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: dia:Dtpsy_0228 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004125037.1 KEGG: dia:Dtpsy_0229 hypothetical protein YP_004125038.1 KEGG: dac:Daci_0351 glutamyl-tRNA(Gln) amidotransferase, B subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase YP_004125039.1 KEGG: ajs:Ajs_0237 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_004125040.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; KEGG: aav:Aave_0293 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_004125041.1 KEGG: dia:Dtpsy_0233 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_004125042.1 KEGG: ajs:Ajs_0240 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_004125043.1 KEGG: ajs:Ajs_0241 rod shape-determining MreD transmembrane protein; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_004125044.1 TIGRFAM: penicillin-binding protein 2; KEGG: dia:Dtpsy_0236 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004125045.1 KEGG: dia:Dtpsy_0241 arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase YP_004125046.1 PFAM: protein of unknown function DUF81; KEGG: aav:Aave_0304 hypothetical protein YP_004125047.1 KEGG: ajs:Ajs_0249 glucose-methanol-choline oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_004125048.1 PFAM: protein of unknown function DUF140; KEGG: ajs:Ajs_0250 hypothetical protein YP_004125049.1 KEGG: ajs:Ajs_0251 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125050.1 PFAM: Mammalian cell entry related domain protein; KEGG: dia:Dtpsy_0246 mammalian cell entry related domain protein YP_004125051.1 PFAM: protein of unknown function DUF330; KEGG: ajs:Ajs_0253 lipoprotein YP_004125052.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6198 LysR family transcriptional regulator YP_004125053.1 PFAM: aconitate hydratase domain-containing protein; KEGG: cti:RALTA_B0856 hydrolyase YP_004125054.1 KEGG: cti:RALTA_B0858 conserved hypothetical protein; UPF0065 YP_004125055.1 KEGG: mmi:MMAR_5403 ribonuclease activity regulator protein RraA; TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase YP_004125056.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: dia:Dtpsy_0253 multiple antibiotic resistance (MarC)-related protein YP_004125057.1 KEGG: dia:Dtpsy_0255 carboxymethylenebutenolidase YP_004125058.1 KEGG: dia:Dtpsy_0256 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004125059.1 PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_0262 secretion protein HlyD family protein YP_004125060.1 KEGG: dia:Dtpsy_0258 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004125061.1 KEGG: ajs:Ajs_0264 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004125062.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: dia:Dtpsy_0260 Mg2 transporter protein CorA family protein YP_004125063.1 KEGG: ajs:Ajs_0266 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_004125064.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: dia:Dtpsy_0262 biotin/lipoate A/B protein ligase YP_004125065.1 PFAM: Uncharacterised protein family UPF0093; KEGG: dia:Dtpsy_0263 hypothetical protein YP_004125066.1 PFAM: VanZ family protein; KEGG: ajs:Ajs_0269 VanZ family protein YP_004125067.1 KEGG: dia:Dtpsy_0265 ferredoxin-like protein YP_004125068.1 KEGG: dia:Dtpsy_0266 transmembrane protein YP_004125069.1 KEGG: ajs:Ajs_0272 penicillin-binding protein 6; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004125070.1 KEGG: dia:Dtpsy_0268 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_004125071.1 KEGG: dia:Dtpsy_0269 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_004125072.1 KEGG: ajs:Ajs_0275 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004125073.1 KEGG: ajs:Ajs_0276 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004125074.1 KEGG: vei:Veis_1263 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_004125075.1 KEGG: dia:Dtpsy_0273 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_004125076.1 PFAM: ribosomal protein L4/L1e; KEGG: dia:Dtpsy_0274 50S ribosomal protein L4 YP_004125077.1 PFAM: Ribosomal protein L25/L23; KEGG: dia:Dtpsy_0275 50S ribosomal protein L23 YP_004125078.1 KEGG: dia:Dtpsy_0276 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_004125079.1 KEGG: dac:Daci_0395 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_004125080.1 KEGG: dac:Daci_0396 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_004125081.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: aav:Aave_0344 30S ribosomal protein S3; SMART: KH domain protein YP_004125082.1 KEGG: dia:Dtpsy_0280 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004125083.1 KEGG: dia:Dtpsy_0281 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004125084.1 KEGG: dia:Dtpsy_0282 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_004125085.1 PFAM: Redoxin domain protein; KEGG: ajs:Ajs_0288 redoxin domain-containing protein YP_004125086.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dia:Dtpsy_0284 GCN5-related N-acetyltransferase YP_004125087.1 KEGG: dia:Dtpsy_0285 cytochrome b561 YP_004125088.1 PFAM: Redoxin domain protein; KEGG: dia:Dtpsy_0287 redoxin domain protein YP_004125089.1 KEGG: dia:Dtpsy_0288 hypothetical protein YP_004125090.1 PFAM: PTS system fructose subfamily IIA component; KEGG: ajs:Ajs_0295 PTS system fructose subfamily IIA component YP_004125091.1 KEGG: dia:Dtpsy_0291 phosphocarrier, HPr family; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004125092.1 KEGG: ajs:Ajs_0297 phosphoenolpyruvate--protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_004125093.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: dia:Dtpsy_0293 lipoyl synthase; PFAM: Radical SAM domain protein YP_004125094.1 TIGRFAM: lipoate-protein ligase B; KEGG: ajs:Ajs_0299 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_004125095.1 PFAM: protein of unknown function DUF493; KEGG: dia:Dtpsy_0295 protein of unknown function DUF493 YP_004125096.1 PFAM: ATP synthase I chain; KEGG: aav:Aave_0365 ATP synthase protein I YP_004125097.1 KEGG: dia:Dtpsy_0297 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_004125098.1 KEGG: dac:Daci_0415 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_004125099.1 KEGG: dia:Dtpsy_0299 F0F1 ATP synthase subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_004125100.1 KEGG: dia:Dtpsy_0300 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_004125101.1 KEGG: aav:Aave_0370 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_004125102.1 KEGG: dia:Dtpsy_0302 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_004125103.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: dia:Dtpsy_0303 F0F1 ATP synthase subunit beta; SMART: AAA ATPase YP_004125104.1 KEGG: dia:Dtpsy_0304 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like YP_004125105.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctt:CtCNB1_2574 transcriptional regulator, LysR family YP_004125106.1 PFAM: protein of unknown function DUF477; KEGG: ajs:Ajs_0314 hypothetical protein YP_004125107.1 PFAM: protein of unknown function DUF477; KEGG: ajs:Ajs_0315 hypothetical protein YP_004125108.1 PFAM: LemA family protein; KEGG: aav:Aave_0381 LemA family protein YP_004125109.1 KEGG: dia:Dtpsy_0312 hypothetical protein YP_004125110.1 KEGG: ajs:Ajs_0319 hypothetical protein YP_004125111.1 PFAM: cytochrome c class I; KEGG: aav:Aave_0385 cytochrome c, class I YP_004125112.1 KEGG: dia:Dtpsy_0316 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004125113.1 KEGG: dia:Dtpsy_0317 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004125114.1 KEGG: dia:Dtpsy_0318 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004125115.1 PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain-containing protein; KEGG: dia:Dtpsy_0319 transcriptional regulator, TetR family YP_004125116.1 KEGG: ajs:Ajs_0276 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004125117.1 KEGG: ajs:Ajs_3903 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_004125118.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: dia:Dtpsy_3251 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein YP_004125119.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: aav:Aave_4535 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_004125120.1 KEGG: dia:Dtpsy_3249 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_004125121.1 PFAM: ribosomal protein L10; KEGG: aav:Aave_4533 50S ribosomal protein L10 YP_004125122.1 KEGG: dia:Dtpsy_3247 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 ; ribosomal protein 60S YP_004125123.1 KEGG: aav:Aave_4531 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_004125124.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: dia:Dtpsy_3245 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_004125125.1 KEGG: dia:Dtpsy_3244 hypothetical protein YP_004125126.1 KEGG: dia:Dtpsy_3243 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein YP_004125127.1 KEGG: ajs:Ajs_3893 hypothetical protein YP_004125128.1 KEGG: ajs:Ajs_3892 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_004125129.1 KEGG: dia:Dtpsy_3240 two component transcriptional regulator, fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver YP_004125130.1 KEGG: dia:Dtpsy_3238 hypothetical protein YP_004125131.1 KEGG: dia:Dtpsy_3237 hypothetical protein YP_004125132.1 KEGG: dia:Dtpsy_3236 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004125133.1 PFAM: protein of unknown function DUF955; KEGG: dia:Dtpsy_3235 protein of unknown function DUF955 YP_004125134.1 PFAM: Integrase catalytic region; regulatory protein MerR; KEGG: ctt:CtCNB1_2459 IstA YP_004125135.1 KEGG: ctt:CtCNB1_3734 IstB-like ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004125136.1 KEGG: bbr:BB2493 phage-related DNA-binding protein; manually curated; PFAM: protein of unknown function DUF955 YP_004125137.1 KEGG: ppg:PputGB1_4812 hypothetical protein YP_004125138.1 KEGG: sbn:Sbal195_1558 hypothetical protein YP_004125139.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bpy:Bphyt_3723 CMP/dCMP deaminase zinc-binding YP_004125140.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: dia:Dtpsy_0400 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004125141.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: dia:Dtpsy_0401 NAD-dependent epimerase/dehydratase YP_004125142.1 KEGG: dia:Dtpsy_0402 glycosyltransferase YP_004125143.1 PFAM: glycosyl transferase family 2; KEGG: ajs:Ajs_0411 glycosyl transferase family protein YP_004125144.1 KEGG: ajs:Ajs_0412 hypothetical protein YP_004125145.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dia:Dtpsy_0405 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004125146.1 PFAM: Uncharacterised protein family UPF0102; KEGG: ajs:Ajs_0414 hypothetical protein YP_004125147.1 KEGG: dia:Dtpsy_0407 phosphoheptose isomerase YP_004125148.1 KEGG: ajs:Ajs_0416 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004125149.1 KEGG: dia:Dtpsy_0409 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004125150.1 KEGG: ajs:Ajs_0418 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E YP_004125151.1 KEGG: dia:Dtpsy_0411 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004125152.1 KEGG: aav:Aave_0637 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E YP_004125153.1 PFAM: alanine racemase domain protein; KEGG: dac:Daci_1069 alanine racemase domain-containing protein YP_004125154.1 PFAM: aminotransferase class V; KEGG: dia:Dtpsy_0414 aminotransferase class V YP_004125155.1 manually curated; KEGG: aav:Aave_0642 hypothetical protein YP_004125156.1 PFAM: protein of unknown function DUF445; KEGG: ajs:Ajs_0423 hypothetical protein YP_004125157.1 PFAM: FAD linked oxidase domain protein; KEGG: dia:Dtpsy_0417 FAD linked oxidase domain protein YP_004125158.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_0418 transcriptional regulator, LysR family YP_004125159.1 KEGG: dia:Dtpsy_0419 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_004125160.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: ctt:CtCNB1_4372 diguanylate cyclase/phosphodiesterase with; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004125161.1 PFAM: protein of unknown function DUF399; KEGG: ajs:Ajs_0430 hypothetical protein YP_004125162.1 KEGG: ajs:Ajs_0431 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein YP_004125163.1 KEGG: dia:Dtpsy_0423 GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_004125164.1 KEGG: dia:Dtpsy_0424 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004125165.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0434 major facilitator superfamily transporter YP_004125166.1 KEGG: dia:Dtpsy_0426 nitrite transporter; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1 YP_004125167.1 KEGG: ajs:Ajs_0436 respiratory nitrate reductase alpha subunit apoprotein; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_004125168.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: dia:Dtpsy_0428 nitrate reductase, beta subunit YP_004125169.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: dia:Dtpsy_0429 nitrate reductase molybdenum cofactor assembly chaperone; PFAM: TorD-like chaperone YP_004125170.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: dia:Dtpsy_0430 respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit YP_004125171.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dia:Dtpsy_0431 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004125172.1 KEGG: dia:Dtpsy_0432 carbonate dehydratase; PFAM: carbonic anhydrase YP_004125173.1 PFAM: nitroreductase; KEGG: dia:Dtpsy_0434 nitroreductase YP_004125174.1 KEGG: dia:Dtpsy_0435 hypothetical protein YP_004125175.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dia:Dtpsy_0436 hemerythrin HHE cation binding domain protein YP_004125176.1 KEGG: ajs:Ajs_0446 hypothetical protein YP_004125177.1 KEGG: dia:Dtpsy_0438 hypothetical protein YP_004125178.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ajs:Ajs_0449 fumarylacetoacetate (FAA) hydrolase YP_004125179.1 KEGG: cph:Cpha266_1840 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004125180.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: ajs:Ajs_0451 molybdopterin oxidoreductase YP_004125181.1 KEGG: vei:Veis_1579 hypothetical protein YP_004125182.1 KEGG: cti:RALTA_B1739 citrate lyase/aldolase; PFAM: HpcH/HpaI aldolase YP_004125183.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_1581 formyl-CoA transferase YP_004125184.1 KEGG: cti:RALTA_B1741 hypothetical protein YP_004125185.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: cti:RALTA_B1742 acyl CoA dehydrogenase oxidoreductase protein YP_004125186.1 PFAM: MaoC domain protein dehydratase; KEGG: cti:RALTA_B1743 hypothetical protein YP_004125187.1 PFAM: MmgE/PrpD family protein; KEGG: vei:Veis_1585 MmgE/PrpD family protein YP_004125188.1 KEGG: xau:Xaut_1974 citryl-CoA lyase; PFAM: HpcH/HpaI aldolase YP_004125189.1 PFAM: regulatory protein IclR; KEGG: rcu:RCOM_0002820 Transcriptional regulator kdgR, putative YP_004125190.1 TIGRFAM: amidohydrolase; KEGG: dia:Dtpsy_0444 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004125191.1 PFAM: acyl-coA-binding protein ACBP; KEGG: dia:Dtpsy_0446 acyl-coA-binding protein ACBP YP_004125192.1 PFAM: aminopeptidase; KEGG: dia:Dtpsy_0447 zinc protease protein YP_004125193.1 KEGG: ajs:Ajs_0457 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_004125194.1 KEGG: dia:Dtpsy_0450 hypothetical protein YP_004125195.1 KEGG: ajs:Ajs_0460 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004125196.1 PFAM: Domain of unknown function DUF1840; KEGG: dia:Dtpsy_0452 hypothetical protein YP_004125197.1 KEGG: ajs:Ajs_0462 hypothetical protein YP_004125198.1 KEGG: vap:Vapar_5015 hypothetical protein YP_004125199.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dia:Dtpsy_0455 phenylacetate-CoA ligase YP_004125200.1 KEGG: ctt:CtCNB1_4329 high-affinity branched-chain amino acid transport ATP-binding protein LivF; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125201.1 KEGG: dac:Daci_1155 hypothetical protein YP_004125202.1 PFAM: inner-membrane translocator; KEGG: ctt:CtCNB1_4327 membrane protein YP_004125203.1 PFAM: inner-membrane translocator; KEGG: ctt:CtCNB1_4326 high-affinity branched-chain amino acidtransport system permease protein LivH YP_004125204.1 KEGG: dac:Daci_1158 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125205.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase YP_004125206.1 KEGG: dia:Dtpsy_0462 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase YP_004125207.1 KEGG: ajs:Ajs_0472 hypothetical protein YP_004125208.1 KEGG: ajs:Ajs_0473 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004125209.1 KEGG: ajs:Ajs_0474 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_004125210.1 KEGG: dia:Dtpsy_0466 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004125211.1 KEGG: dac:Daci_1191 hypothetical protein YP_004125212.1 KEGG: dia:Dtpsy_0467 hypothetical protein YP_004125213.1 PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_0479 serine/threonine protein kinase YP_004125214.1 KEGG: dia:Dtpsy_0471 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; UspA domain-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain YP_004125215.1 PFAM: metallophosphoesterase; KEGG: dia:Dtpsy_0472 metallophosphoesterase YP_004125216.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0058 L-carnitine dehydratase/bile acid-inducible protein F YP_004125217.1 KEGG: ctt:CtCNB1_2196 hypothetical protein YP_004125218.1 KEGG: ctt:CtCNB1_2197 TctC YP_004125219.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_0476 3-hydroxybutyryl-CoA dehydrogenase YP_004125220.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: dia:Dtpsy_0477 choline dehydrogenase YP_004125221.1 KEGG: ajs:Ajs_3712 ABC transporter; TIGRFAM: ABC transporter; PFAM: ABC transporter YP_004125222.1 KEGG: ajs:Ajs_3711 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125223.1 PFAM: Tannase and feruloyl esterase; KEGG: reu:Reut_A1509 tannase and feruloyl esterase YP_004125224.1 TIGRFAM: AMP nucleosidase; KEGG: aav:Aave_4246 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1 YP_004125225.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold-3 domain protein; KEGG: dia:Dtpsy_0486 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004125226.1 manually curated; TIGRFAM: cation diffusion facilitator family transporter; KEGG: ajs:Ajs_3707 cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004125227.1 KEGG: dia:Dtpsy_0488 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004125228.1 PFAM: protein of unknown function DUF81; KEGG: dia:Dtpsy_0490 protein of unknown function DUF81 YP_004125229.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_1220 LysR family transcriptional regulator YP_004125230.1 KEGG: dac:Daci_1221 hypothetical protein YP_004125231.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: dac:Daci_1222 L-carnitine dehydratase/bile acid-inducible protein F YP_004125232.1 KEGG: dac:Daci_1223 quinone oxidoreductase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004125233.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1709 acyl-CoA synthetase YP_004125234.1 PFAM: protein of unknown function UPF0054; KEGG: ajs:Ajs_3702 hypothetical protein YP_004125235.1 PFAM: PhoH family protein; KEGG: dia:Dtpsy_0492 PhoH family protein YP_004125236.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: dia:Dtpsy_0493 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1 YP_004125237.1 KEGG: dia:Dtpsy_0494 endoproteinase Arg-C YP_004125238.1 KEGG: ajs:Ajs_3698 DnaK-related protein YP_004125239.1 KEGG: dac:Daci_5720 heat-shock chaperone protein YP_004125240.1 KEGG: dac:Daci_5721 hypothetical protein YP_004125241.1 SMART: AAA ATPase; manually curated; KEGG: dia:Dtpsy_0499 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain YP_004125242.1 PFAM: MgtC/SapB transporter; KEGG: dac:Daci_1228 MgtC/SapB transporter YP_004125243.1 KEGG: dia:Dtpsy_3519 hypothetical protein YP_004125244.1 KEGG: ctt:CtCNB1_4283 hypothetical protein YP_004125245.1 PFAM: alanine racemase domain protein; KEGG: dia:Dtpsy_0501 alanine racemase domain protein YP_004125246.1 PFAM: Phosphoglycerate mutase; KEGG: dia:Dtpsy_0502 phosphoglycerate mutase YP_004125247.1 KEGG: dia:Dtpsy_0504 hypothetical protein YP_004125248.1 PFAM: PP-loop domain protein; KEGG: dia:Dtpsy_0505 PP-loop domain protein YP_004125249.1 PFAM: dihydroneopterin aldolase; KEGG: dia:Dtpsy_0506 dihydroneopterin aldolase YP_004125250.1 PFAM: dihydroneopterin aldolase; KEGG: dia:Dtpsy_0507 dihydroneopterin aldolase YP_004125251.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bge:BC1002_2951 short-chain dehydrogenase/reductase SDR YP_004125252.1 PFAM: protein of unknown function DUF185; KEGG: dia:Dtpsy_0510 protein of unknown function DUF185 YP_004125253.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_4030 hypothetical protein YP_004125254.1 KEGG: dia:Dtpsy_0515 hypothetical protein YP_004125255.1 PFAM: ROK family protein; KEGG: ajs:Ajs_0500 glucokinase YP_004125256.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: ajs:Ajs_0501 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_004125257.1 KEGG: dia:Dtpsy_0519 trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_004125258.1 KEGG: dia:Dtpsy_0520 thioredoxin; TIGRFAM: thioredoxin; MJ0042 family finger-like protein; PFAM: Thioredoxin domain-containing protein YP_004125259.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: dia:Dtpsy_0521 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_004125260.1 KEGG: vei:Veis_3990 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004125261.1 KEGG: vei:Veis_3993 hypothetical protein YP_004125262.1 KEGG: vei:Veis_3992 hypothetical protein YP_004125263.1 KEGG: vei:Veis_3991 hypothetical protein YP_004125264.1 PFAM: metallophosphoesterase; KEGG: dia:Dtpsy_0522 metallophosphoesterase YP_004125265.1 PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0507 glutathione S-transferase domain-containing protein YP_004125266.1 KEGG: dia:Dtpsy_0524 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004125267.1 PFAM: Lytic transglycosylase catalytic; KEGG: dia:Dtpsy_0525 lytic transglycosylase catalytic YP_004125268.1 KEGG: ajs:Ajs_0510 cytochrome b561 YP_004125269.1 KEGG: dia:Dtpsy_0527 signal peptide protein YP_004125270.1 KEGG: ajs:Ajs_0512 hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit YP_004125271.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ajs:Ajs_0513 (S)-2-hydroxy-acid oxidase YP_004125272.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_0514 TonB-dependent receptor YP_004125273.1 KEGG: ajs:Ajs_0515 beta-lactamase domain-containing protein YP_004125274.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase YP_004125275.1 KEGG: dia:Dtpsy_0533 PGAP1 family protein YP_004125276.1 PFAM: Beta-ketoacyl synthase; KEGG: dia:Dtpsy_0542 beta-ketoacyl synthase YP_004125277.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: dia:Dtpsy_0541 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004125278.1 KEGG: ajs:Ajs_0524 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004125279.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: ajs:Ajs_0523 CBS domain-containing protein YP_004125280.1 KEGG: ajs:Ajs_0522 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase YP_004125281.1 KEGG: dia:Dtpsy_0537 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004125282.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: ajs:Ajs_0520 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004125283.1 TIGRFAM: phenylalanine-4-hydroxylase; KEGG: dia:Dtpsy_0534 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase-like YP_004125284.1 KEGG: pol:Bpro_0273 branched-chain alpha-keto acid dehydrogenase E1 component; PFAM: dehydrogenase E1 component YP_004125285.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: pol:Bpro_0274 branched-chain alpha-keto acid dehydrogenase E1 component YP_004125286.1 PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bpt:Bpet3509 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_004125287.1 KEGG: bch:Bcen2424_1246 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004125288.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: dac:Daci_1288 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit YP_004125289.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: ajs:Ajs_0528 glycine--tRNA ligase YP_004125290.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: dia:Dtpsy_0545 histidinol-phosphate phosphatase family protein YP_004125291.1 KEGG: ajs:Ajs_0530 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004125292.1 PFAM: protein of unknown function DUF45; KEGG: dia:Dtpsy_0547 protein of unknown function DUF45 YP_004125293.1 SMART: Rhodanese domain protein; KEGG: ajs:Ajs_0532 rhodanese domain-containing protein YP_004125294.1 KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; transport-associated; SMART: Peptidoglycan-binding LysM YP_004125295.1 KEGG: dia:Dtpsy_0550 pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_004125296.1 PFAM: regulatory protein TetR; KEGG: dia:Dtpsy_0551 transcriptional regulator, TetR family YP_004125297.1 KEGG: dia:Dtpsy_0552 poly(hydroxyalkanoate) granule-associated protein; TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein YP_004125298.1 KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004125299.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: ajs:Ajs_0538 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004125300.1 KEGG: bvi:Bcep1808_3215 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004125301.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: dia:Dtpsy_0556 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004125302.1 PFAM: protein of unknown function DUF1972; glycosyl transferase group 1; KEGG: gme:Gmet_2169 glycosyltransferase-like protein YP_004125303.1 KEGG: ajs:Ajs_0541 rhamnosyltransferase; TIGRFAM: rhamnosyltransferase; PFAM: glycosyl transferase family 2 YP_004125304.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: vei:Veis_0688 general secretory pathway protein E YP_004125305.1 PFAM: Type II secretion system F domain; KEGG: eba:ebA1619 general secretion pathway protein F YP_004125306.1 KEGG: aav:Aave_4158 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_004125307.1 KEGG: dac:Daci_1302 general secretion pathway protein H YP_004125308.1 KEGG: vei:Veis_0684 general secretion pathway protein I YP_004125309.1 KEGG: vei:Veis_0683 general secretion pathway protein J YP_004125310.1 KEGG: eba:ebA1612 general secretory pathway protein K YP_004125311.1 PFAM: Fimbrial assembly family protein; KEGG: aav:Aave_4153 fimbrial assembly family protein YP_004125312.1 PFAM: General secretion pathway protein M; KEGG: vei:Veis_0680 general secretion pathway protein M YP_004125313.1 KEGG: fgr:FG01491.1 hypothetical protein YP_004125314.1 KEGG: eba:ebA1602 general (type II) secretion pathway (GSP) D protein; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein YP_004125315.1 KEGG: dac:Daci_1310 hypothetical protein YP_004125316.1 KEGG: azc:AZC_2635 hypothetical protein YP_004125317.1 KEGG: dre:541320 integrin, alpha 6b YP_004125318.1 KEGG: aco:Amico_0081 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004125319.1 PFAM: Methyltransferase type 11; KEGG: pnu:Pnuc_0320 methyltransferase type 11 YP_004125320.1 PFAM: glycosyl transferase family 2; KEGG: ter:Tery_4437 glycosyl transferase family protein YP_004125321.1 PFAM: glycosyl transferase group 1; KEGG: lxx:Lxx04950 glycosyl transferase YP_004125322.1 PFAM: ABC transporter; KEGG: mag:amb1063 ABC-type polysaccharide/polyol phosphate export systems YP_004125323.1 KEGG: vei:Veis_0673 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125324.1 KEGG: ajs:Ajs_3056 lipid A biosynthesis acyltransferase YP_004125325.1 PFAM: Methyltransferase type 11; KEGG: azl:AZL_f01750 hypothetical protein YP_004125326.1 PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc0977 transglycosylase signal peptide protein YP_004125327.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: vei:Veis_1227 glycosyl transferase family protein YP_004125328.1 TIGRFAM: acetylglutamate kinase; KEGG: ajs:Ajs_0588 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004125329.1 PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0589 nucleoid occlusion protein YP_004125330.1 PFAM: regulatory protein TetR; KEGG: dia:Dtpsy_0570 transcriptional regulator, TetR family YP_004125331.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_0571 acyl-CoA dehydrogenase domain protein YP_004125332.1 KEGG: dia:Dtpsy_0572 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2147 YP_004125333.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: dac:Daci_1339 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_004125334.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: mpt:Mpe_A0416 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004125335.1 KEGG: dia:Dtpsy_0576 hypothetical protein YP_004125336.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dia:Dtpsy_0577 enoyl-CoA hydratase YP_004125337.1 PFAM: protein of unknown function DUF583; KEGG: dia:Dtpsy_0579 protein of unknown function DUF583 YP_004125338.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0601 thioesterase superfamily protein YP_004125339.1 KEGG: ajs:Ajs_0602 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004125340.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:PHG398 acyl-CoA synthetase YP_004125341.1 PFAM: MaoC domain protein dehydratase; KEGG: reh:PHG397 hypothetical protein YP_004125342.1 KEGG: reh:PHG396 NagM-like protein YP_004125343.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: reh:PHG395 2-nitropropane dioxygenase YP_004125344.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reh:PHG401 regulatory protein YP_004125345.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: ajs:Ajs_0603 MazG nucleotide pyrophosphohydrolase YP_004125346.1 KEGG: ajs:Ajs_0604 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_004125347.1 KEGG: ajs:Ajs_0605 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004125348.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ajs:Ajs_0606 tripartite ATP-independent periplasmic transporter DctQ YP_004125349.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dia:Dtpsy_0586 transcriptional regulator, LysR family YP_004125350.1 KEGG: dia:Dtpsy_0588 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004125351.1 KEGG: dia:Dtpsy_0589 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004125352.1 KEGG: dia:Dtpsy_0590 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004125353.1 KEGG: dia:Dtpsy_0591 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125354.1 KEGG: dia:Dtpsy_0592 ornithine cyclodeaminase; PFAM: ornithine cyclodeaminase/mu-crystallin YP_004125355.1 KEGG: ajs:Ajs_0616 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004125356.1 KEGG: ctt:CtCNB1_0527 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004125357.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rfr:Rfer_0646 short-chain dehydrogenase/reductase SDR YP_004125358.1 TIGRFAM: adenosylhomocysteinase; KEGG: dia:Dtpsy_0597 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_004125359.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_0619 ribosomal RNA methyltransferase RrmJ/FtsJ YP_004125360.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: dia:Dtpsy_0599 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_004125361.1 KEGG: ajs:Ajs_0622 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A YP_004125362.1 PFAM: protein of unknown function DUF519; KEGG: dia:Dtpsy_0602 protein of unknown function DUF519 YP_004125363.1 KEGG: ajs:Ajs_0624 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain YP_004125364.1 KEGG: aav:Aave_4053 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_004125365.1 PFAM: ribosomal protein S9; KEGG: ctt:CtCNB1_0541 ribosomal protein S9 YP_004125366.1 KEGG: dia:Dtpsy_0608 iron-sulfur cluster insertion protein ErpA; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004125367.1 KEGG: rfr:Rfer_0842 hypothetical protein YP_004125368.1 PFAM: protein of unknown function UPF0075; KEGG: dia:Dtpsy_0609 anhydro-N-acetylmuramic acid kinase YP_004125369.1 PFAM: Peptidase M23; KEGG: ajs:Ajs_0631 peptidase M23B YP_004125370.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; KEGG: ajs:Ajs_0632 tyrosyl-tRNA synthetase; SMART: RNA-binding S4 domain protein YP_004125371.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_0634 LysR family transcriptional regulator YP_004125372.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: ajs:Ajs_0636 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_004125373.1 KEGG: ajs:Ajs_0637 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein YP_004125374.1 KEGG: dia:Dtpsy_0617 MerR family transcriptional regulator YP_004125375.1 KEGG: dia:Dtpsy_0618 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004125376.1 KEGG: ajs:Ajs_0640 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004125377.1 KEGG: dia:Dtpsy_0620 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_004125378.1 manually curated; KEGG: vei:Veis_4900 hypothetical protein YP_004125379.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004125380.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004125381.1 KEGG: ctt:CtCNB1_4017 hypothetical protein YP_004125382.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ctt:CtCNB1_4018 oxidoreductase, molybdopterin binding protein YP_004125383.1 KEGG: ctt:CtCNB1_4019 transmembrane hydrogenase cytochrome YP_004125384.1 KEGG: pol:Bpro_0543 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004125385.1 KEGG: vap:Vapar_2987 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004125386.1 KEGG: rru:Rru_A2708 hypothetical protein YP_004125387.1 KEGG: cja:CJA_0975 von Willebrand factor type A domain protein; PFAM: protein of unknown function DUF1555; von Willebrand factor type A; SMART: von Willebrand factor type A YP_004125388.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: rfr:Rfer_0711 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase YP_004125389.1 KEGG: rfr:Rfer_0658 polysaccharide export protein; TIGRFAM: polysaccharide export protein, PEP-CTERM sytem-associated; PFAM: polysaccharide export protein; Soluble ligand binding domain YP_004125390.1 manually curated; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; KEGG: rfr:Rfer_0659 lipopolysaccharide biosynthesis; PFAM: lipopolysaccharide biosynthesis protein YP_004125391.1 manually curated; KEGG: app:CAP2UW1_1413 non-specific protein-tyrosine kinase YP_004125392.1 TIGRFAM: PEP-CTERM system associated protein; KEGG: rfr:Rfer_0661 hypothetical protein YP_004125393.1 KEGG: rfr:Rfer_0662 ATPase; TIGRFAM: secretion ATPase, PEP-CTERM locus subfamily; SMART: AAA ATPase YP_004125394.1 KEGG: app:CAP2UW1_1417 polysaccharide deactylase family protein, PEP-Cterm locus subfamily; TIGRFAM: polysaccharide deactylase family protein, PEP-CTERM locus subfamily; PFAM: polysaccharide deacetylase YP_004125395.1 KEGG: rfr:Rfer_0665 hypothetical protein; manually curated; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated YP_004125396.1 KEGG: dar:Daro_2405 glycosyl transferase, group 1; TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated; PFAM: glycosyl transferase group 1 YP_004125397.1 KEGG: rfr:Rfer_0666 hypothetical protein; TIGRFAM: exosortase 1; eight transmembrane protein EpsH; EpsI family protein; PFAM: Exosortase EpsH-related YP_004125398.1 TIGRFAM: exosortase 1 system-associated amidotransferase 1; asparagine synthase (glutamine-hydrolyzing); KEGG: rfr:Rfer_0669 asparagine synthase, glutamine-hydrolyzing; PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004125399.1 KEGG: dar:Daro_2407 glycosyl transferase, group 1; TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated; PFAM: glycosyl transferase group 1 YP_004125400.1 KEGG: dar:Daro_2409 glycosyl transferase, group 1; manually curated; PFAM: glycosyl transferase group 1 YP_004125401.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: gme:Gmet_1489 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004125402.1 KEGG: geo:Geob_3227 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004125403.1 PFAM: glycosyl transferase group 1; KEGG: hse:Hsero_2751 glycosyltransferase 1 protein YP_004125405.1 KEGG: hse:Hsero_2764 O-antigen polymerase; TIGRFAM: wzy family polymerase, exosortase system type 1 associated; PFAM: O-antigen polymerase YP_004125406.1 PFAM: polysaccharide deacetylase; KEGG: azo:azo3266 polysaccharide deacetylase YP_004125407.1 PFAM: polysaccharide deacetylase; KEGG: nmu:Nmul_A0301 polysaccharide deacetylase YP_004125408.1 KEGG: psl:Psta_3837 hypothetical protein YP_004125409.1 PFAM: glycosyl transferase family 2; KEGG: aeh:Mlg_0132 glycosyl transferase family protein YP_004125410.1 PFAM: polysaccharide biosynthesis protein; KEGG: nwa:Nwat_1744 polysaccharide biosynthesis protein YP_004125411.1 KEGG: reu:Reut_B5375 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004125412.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: abo:ABO_0909 4-epimerase YP_004125413.1 PFAM: sulfatase; KEGG: eli:ELI_12100 sulfatase YP_004125414.1 KEGG: hse:Hsero_2760 hypothetical protein YP_004125415.1 manually curated; KEGG: alv:Alvin_1802 hypothetical protein YP_004125416.1 PFAM: protein of unknown function DUF1555; KEGG: ppd:Ppro_2434 hypothetical protein YP_004125417.1 KEGG: rfr:Rfer_0694 esterase/lipase/thioesterase family protein; TIGRFAM: hydrolase, ortholog 1, exosortase system type 1 associated; PFAM: alpha/beta hydrolase fold YP_004125418.1 TIGRFAM: hydrolase, ortholog 2, exosortase system type 1 associated; KEGG: app:CAP2UW1_4344 hydrolase, exosortase system type 1 associated YP_004125419.1 KEGG: rfr:Rfer_0698 hypothetical protein YP_004125420.1 KEGG: app:CAP2UW1_1626 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; TIGRFAM: acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; PFAM: AMP-dependent synthetase and ligase YP_004125421.1 KEGG: rfr:Rfer_0700 Orn/DAP/Arg decarboxylase 2; TIGRFAM: pyridoxal-dependent decarboxylase, exosortase system type 1 associated; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004125422.1 TIGRFAM: PEP-CTERM system histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_0703 periplasmic sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004125423.1 TIGRFAM: PEP-CTERM system response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: rfr:Rfer_0704 two component, sigma54 specific, fis family transcriptional regulator; SMART: response regulator receiver; AAA ATPase YP_004125424.1 KEGG: rfr:Rfer_0705 tetratricopeptide TPR_2; TIGRFAM: PEP-CTERM system TPR-repeat lipoprotein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein YP_004125425.1 KEGG: rfr:Rfer_0710 peptidase S1 and S6, chymotrypsin/Hap; manually curated; PFAM: peptidase S1 and S6 chymotrypsin/Hap YP_004125426.1 KEGG: dia:Dtpsy_0625 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004125427.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: dia:Dtpsy_0631 2OG-Fe(II) oxygenase YP_004125428.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0653 AMP-dependent synthetase and ligase YP_004125429.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ctt:CtCNB1_2425 FAD-binding oxidoreductase YP_004125430.1 KEGG: vap:Vapar_3422 hypothetical protein YP_004125431.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; Peptidoglycan-binding domain 1 protein; KEGG: pph:Ppha_2260 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin YP_004125432.1 PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_0654 DsbA oxidoreductase YP_004125433.1 PFAM: CreA family protein; KEGG: dia:Dtpsy_0634 CreA family protein YP_004125434.1 KEGG: dia:Dtpsy_0635 cyanophycin synthetase; TIGRFAM: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; cytoplasmic peptidoglycan synthetase domain protein YP_004125435.1 TIGRFAM: cyanophycin synthetase; KEGG: ctt:CtCNB1_0610 cyanophycin synthetase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding YP_004125436.1 manually curated; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: dia:Dtpsy_0637 ABC transporter related; SMART: AAA ATPase YP_004125437.1 KEGG: dia:Dtpsy_0638 hypothetical protein YP_004125438.1 KEGG: dia:Dtpsy_0639 hypothetical protein YP_004125439.1 KEGG: vap:Vapar_5542 elongation factor G; TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor G domain-containing protein YP_004125440.1 KEGG: vei:Veis_1630 5-nucleotidase; PFAM: 5-nucleotidase YP_004125441.1 KEGG: dia:Dtpsy_0642 general secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain YP_004125442.1 KEGG: ajs:Ajs_0664 luciferase family protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004125443.1 KEGG: ajs:Ajs_0665 hypothetical protein YP_004125444.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: dia:Dtpsy_0645 general secretory pathway protein E; SMART: AAA ATPase YP_004125445.1 KEGG: dia:Dtpsy_0646 general secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein YP_004125446.1 KEGG: ajs:Ajs_0668 general secretory pathway N transmembrane protein YP_004125447.1 PFAM: General secretion pathway M protein; KEGG: ajs:Ajs_0669 hypothetical protein YP_004125448.1 PFAM: General secretion pathway L; KEGG: ajs:Ajs_0670 general secretion pathway L YP_004125449.1 KEGG: ajs:Ajs_0671 general secretion pathway protein K YP_004125450.1 KEGG: ajs:Ajs_0672 hypothetical protein YP_004125451.1 KEGG: dia:Dtpsy_0652 general secretion pathway protein I; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J YP_004125452.1 KEGG: dia:Dtpsy_0653 general secretion pathway protein H; manually curated; TIGRFAM: general secretion pathway protein H YP_004125453.1 KEGG: aav:Aave_0925 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_004125454.1 KEGG: dia:Dtpsy_0655 hypothetical protein YP_004125455.1 PFAM: Phosphoglycerate mutase; KEGG: dia:Dtpsy_0656 phosphoglycerate mutase YP_004125456.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: dia:Dtpsy_0657 cobalamin-5-phosphate synthase CobS YP_004125457.1 KEGG: dia:Dtpsy_0658 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain-containing protein YP_004125458.1 PFAM: OsmC family protein; KEGG: dia:Dtpsy_0659 OsmC family protein YP_004125459.1 KEGG: dia:Dtpsy_0660 ubiquinone biosynthesis protein YP_004125460.1 PFAM: porin Gram-negative type; KEGG: aav:Aave_0932 porin YP_004125461.1 PFAM: porin Gram-negative type; KEGG: dia:Dtpsy_0662 porin gram-negative type YP_004125462.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0664 binding-protein-dependent transport systems inner membrane component YP_004125463.1 TIGRFAM: amidohydrolase; KEGG: dia:Dtpsy_0665 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004125464.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0667 binding-protein-dependent transport systems inner membrane component YP_004125465.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dia:Dtpsy_0668 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004125466.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dia:Dtpsy_0669 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004125467.1 PFAM: PEBP family protein; KEGG: dia:Dtpsy_0671 PEBP family protein YP_004125468.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ajs:Ajs_0694 RpiR family transcriptional regulator YP_004125469.1 KEGG: dia:Dtpsy_0674 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004125470.1 KEGG: ajs:Ajs_0697 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_004125471.1 KEGG: aav:Aave_0945 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004125472.1 PFAM: Chaperonin Cpn10; KEGG: dac:Daci_5660 co-chaperonin GroES YP_004125473.1 KEGG: ajs:Ajs_0701 cytidyltransferase-like protein; TIGRFAM: cytidyltransferase-related domain protein; PFAM: NUDIX hydrolase; cytidylyltransferase YP_004125474.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: dia:Dtpsy_0683 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_004125475.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0706 lipid A biosynthesis acyltransferase YP_004125476.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0707 lipid A biosynthesis acyltransferase YP_004125477.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_1352 LysR family transcriptional regulator YP_004125478.1 KEGG: vei:Veis_1351 fis family transcriptional regulator YP_004125479.1 KEGG: cti:RALTA_B1946 conserved hypothetical protein UPF0065 YP_004125480.1 KEGG: vei:Veis_1349 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004125481.1 PFAM: amidohydrolase 2; KEGG: bbt:BBta_3003 hypothetical protein YP_004125482.1 KEGG: aav:Aave_0983 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_004125483.1 PFAM: cytochrome c class I; KEGG: ajs:Ajs_0710 cytochrome c, class I YP_004125484.1 KEGG: dia:Dtpsy_0691 ResB family protein YP_004125485.1 KEGG: ajs:Ajs_0712 cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein YP_004125486.1 PFAM: oxidoreductase molybdopterin binding; KEGG: dia:Dtpsy_0693 sulfite oxidase subunit YedY YP_004125487.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: dia:Dtpsy_0694 ferric reductase domain protein transmembrane component YP_004125488.1 KEGG: dia:Dtpsy_0695 beta-lactamase domain protein YP_004125489.1 KEGG: dia:Dtpsy_0696 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004125490.1 manually curated; KEGG: ajs:Ajs_0717 hypothetical protein YP_004125491.1 KEGG: ajs:Ajs_0728 frataxin family protein; TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein YP_004125492.1 KEGG: dia:Dtpsy_0698 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004125493.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: ajs:Ajs_0730 type IV pilus assembly protein PilM YP_004125494.1 PFAM: Fimbrial assembly family protein; KEGG: ajs:Ajs_0731 fimbrial assembly family protein YP_004125495.1 KEGG: ajs:Ajs_0732 pilus assembly protein, PilO YP_004125496.1 PFAM: Pilus assembly protein PilP; KEGG: dia:Dtpsy_0702 pilus assembly protein PilP YP_004125497.1 KEGG: dia:Dtpsy_0703 type IV pilus secretin PilQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain YP_004125498.1 PFAM: Ig family protein; KEGG: eba:ebA2288 hypothetical protein YP_004125499.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: dia:Dtpsy_0704 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_004125500.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_0736 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: metal-dependent phosphohydrolase HD region YP_004125501.1 PFAM: protein of unknown function DUF1415; KEGG: dia:Dtpsy_0706 protein of unknown function DUF1415 YP_004125502.1 KEGG: dia:Dtpsy_0707 hypothetical protein YP_004125503.1 KEGG: hse:Hsero_3067 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004125504.1 KEGG: hse:Hsero_3068 branched-chain amino acid ABC transporter periplasmic protein YP_004125505.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: hse:Hsero_3069 LysR family transcription regulator protein YP_004125506.1 KEGG: vap:Vapar_1151 protein of unknown function DUF1568 YP_004125507.1 KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_004125508.1 KEGG: dia:Dtpsy_0710 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004125509.1 KEGG: ajs:Ajs_0743 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004125510.1 KEGG: ajs:Ajs_0744 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004125511.1 KEGG: dia:Dtpsy_0713 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125512.1 KEGG: vei:Veis_4017 hypothetical protein YP_004125513.1 KEGG: ajs:Ajs_0746 spermidine synthase; PFAM: Spermine synthase YP_004125514.1 KEGG: dia:Dtpsy_0715 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related YP_004125515.1 KEGG: dia:Dtpsy_0716 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125516.1 PFAM: protein of unknown function DUF140; KEGG: dia:Dtpsy_0717 protein of unknown function DUF140 YP_004125517.1 PFAM: Mammalian cell entry related domain protein; KEGG: dia:Dtpsy_0718 mammalian cell entry related domain protein YP_004125518.1 PFAM: VacJ family lipoprotein; KEGG: ajs:Ajs_0751 VacJ family lipoprotein YP_004125519.1 PFAM: toluene tolerance family protein; KEGG: dia:Dtpsy_0720 toluene tolerance family protein YP_004125520.1 KEGG: dia:Dtpsy_0721 sulfate transporter/antisigma-factor antagonist STAS YP_004125521.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: cps:CPS_0452 sensory box protein; SMART: GGDEF domain containing protein; PAS domain containing protein YP_004125522.1 KEGG: dia:Dtpsy_0722 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125523.1 PFAM: ABC transporter; KEGG: aav:Aave_1020 ABC transporter YP_004125524.1 PFAM: BolA family protein; KEGG: dia:Dtpsy_0724 BolA family protein YP_004125525.1 KEGG: ctt:CtCNB1_0710 UDP-N-acetylglucosamine; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004125526.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: dia:Dtpsy_0726 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region YP_004125527.1 TIGRFAM: histidinol dehydrogenase; KEGG: aav:Aave_1024 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004125528.1 KEGG: dac:Daci_5523 hypothetical protein YP_004125529.1 KEGG: ctt:CtCNB1_0716 hypothetical protein YP_004125530.1 KEGG: dia:Dtpsy_0729 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004125531.1 KEGG: dia:Dtpsy_0730 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_004125532.1 KEGG: dia:Dtpsy_0731 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004125533.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: ajs:Ajs_0765 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_004125534.1 KEGG: ajs:Ajs_0766 hypothetical protein YP_004125535.1 KEGG: ajs:Ajs_0767 transmembrane protein YP_004125536.1 PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_0768 glycosyl transferase, group 1 YP_004125537.1 KEGG: ajs:Ajs_0769 transmembrane protein YP_004125538.1 KEGG: ajs:Ajs_0770 transmembrane protein YP_004125539.1 KEGG: ajs:Ajs_0771 lipoprotein YP_004125540.1 KEGG: ajs:Ajs_0772 TPR repeat-containing protein YP_004125541.1 PFAM: TM1410 hypothetical protein-related protein; polysaccharide deacetylase; KEGG: ajs:Ajs_0773 polysaccharide deacetylase YP_004125542.1 KEGG: ajs:Ajs_0774 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004125543.1 KEGG: dia:Dtpsy_0738 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_004125544.1 KEGG: aav:Aave_1048 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase YP_004125545.1 KEGG: dia:Dtpsy_0740 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like YP_004125546.1 KEGG: dia:Dtpsy_0741 transmembrane protein YP_004125547.1 PFAM: Patatin; KEGG: ajs:Ajs_0779 patatin YP_004125548.1 PFAM: histidine triad (HIT) protein; KEGG: dia:Dtpsy_0743 histidine triad (HIT) protein YP_004125549.1 KEGG: ajs:Ajs_0781 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004125550.1 KEGG: dia:Dtpsy_0745 sec-independent translocase; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004125551.1 KEGG: dia:Dtpsy_0746 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_004125552.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ajs:Ajs_0784 peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein YP_004125553.1 PFAM: protein of unknown function DUF34; KEGG: dia:Dtpsy_0749 protein of unknown function DUF34 YP_004125554.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: ajs:Ajs_0787 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_004125555.1 KEGG: dac:Daci_5504 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_004125556.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; KEGG: ajs:Ajs_0789 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal YP_004125557.1 PFAM: Cytochrome b/b6 domain; KEGG: dia:Dtpsy_0753 cytochrome b/b6 domain protein YP_004125558.1 KEGG: ajs:Ajs_0791 cytochrome c1; manually curated; PFAM: cytochrome c1 YP_004125559.1 PFAM: Glutathione S-transferase domain; KEGG: dia:Dtpsy_0755 glutathione S-transferase domain protein YP_004125560.1 PFAM: Stringent starvation protein B; KEGG: dia:Dtpsy_0756 stringent starvation protein B YP_004125561.1 KEGG: dia:Dtpsy_0757 hypothetical protein YP_004125562.1 KEGG: dia:Dtpsy_0759 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_004125563.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: ajs:Ajs_0797 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ YP_004125564.1 PFAM: protein of unknown function DUF815; KEGG: dia:Dtpsy_0761 protein of unknown function DUF815 YP_004125565.1 PFAM: NUDIX hydrolase; KEGG: dia:Dtpsy_0762 NUDIX hydrolase YP_004125566.1 PFAM: protein of unknown function DUF329; KEGG: dia:Dtpsy_0763 protein of unknown function DUF329 YP_004125567.1 PFAM: protein of unknown function DUF1342; KEGG: dia:Dtpsy_0764 hypothetical protein YP_004125568.1 TIGRFAM: dephospho-CoA kinase; KEGG: ajs:Ajs_0802 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_004125569.1 KEGG: dia:Dtpsy_0766 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_004125570.1 PFAM: Type II secretion system F domain; KEGG: ajs:Ajs_0804 type II secretion system protein YP_004125571.1 TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: ajs:Ajs_0805 type IV-A pilus assembly ATPase PilB; SMART: AAA ATPase YP_004125572.1 KEGG: pca:Pcar_1822 DNA primase YP_004125573.1 KEGG: lch:Lcho_1774 hypothetical protein YP_004125574.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004125575.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004125576.1 KEGG: rpf:Rpic12D_2703 DNA binding domain protein, excisionase family YP_004125577.1 PFAM: integrase family protein; KEGG: rpf:Rpic12D_2659 integrase family protein YP_004125578.1 PFAM: Polyprenyl synthetase; KEGG: ajs:Ajs_0840 dimethylallyltranstransferase YP_004125579.1 KEGG: ajs:Ajs_0841 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_004125580.1 KEGG: dia:Dtpsy_0771 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_004125581.1 KEGG: ajs:Ajs_0843 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_004125582.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: dia:Dtpsy_0773 gamma-glutamyl kinase; SMART: PUA domain containing protein YP_004125583.1 PFAM: NUDIX hydrolase; KEGG: dia:Dtpsy_0774 dinucleoside polyphosphate hydrolase YP_004125584.1 KEGG: dia:Dtpsy_0775 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_004125585.1 PFAM: Lytic transglycosylase catalytic; KEGG: ajs:Ajs_0847 lytic transglycosylase, catalytic YP_004125586.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: dia:Dtpsy_0777 protein of unknown function DUF21 YP_004125587.1 KEGG: aav:Aave_3667 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004125588.1 KEGG: dia:Dtpsy_0778 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin YP_004125589.1 KEGG: ajs:Ajs_0850 HemK family modification methylase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004125590.1 KEGG: ajs:Ajs_0851 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_004125591.1 KEGG: dia:Dtpsy_0781 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_004125592.1 KEGG: dia:Dtpsy_0782 hypothetical protein YP_004125593.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_0783 transcriptional regulator, LysR family YP_004125594.1 KEGG: ajs:Ajs_0855 hypothetical protein YP_004125595.1 PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_0856 N-formylglutamate amidohydrolase YP_004125596.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_0857 MscS mechanosensitive ion channel YP_004125597.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dia:Dtpsy_0787 glycerophosphodiester phosphodiesterase YP_004125598.1 KEGG: ctt:CtCNB1_0786 sn-glycerol-3-phosphate transport ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004125599.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0789 binding-protein-dependent transport systems inner membrane component YP_004125600.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctt:CtCNB1_0788 sn-glycerol-3-phosphate transport systempermease protein UgpA YP_004125601.1 PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_0862 extracellular solute-binding protein YP_004125602.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: ajs:Ajs_0863 D-3-phosphoglycerate dehydrogenase YP_004125603.1 PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dia:Dtpsy_0793 FAD linked oxidase domain protein YP_004125604.1 PFAM: histidine triad (HIT) protein; KEGG: ajs:Ajs_0865 histidine triad (HIT) protein YP_004125605.1 KEGG: dia:Dtpsy_0795 protein of unknown function DUF971 YP_004125606.1 KEGG: dia:Dtpsy_0796 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004125607.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: dia:Dtpsy_0797 import inner membrane translocase subunit Tim44 YP_004125608.1 KEGG: dia:Dtpsy_0798 hypothetical protein YP_004125609.1 KEGG: dia:Dtpsy_0799 ubiquinone biosynthesis protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein YP_004125610.1 PFAM: Na+/solute symporter; KEGG: dia:Dtpsy_0800 Na+/solute symporter YP_004125611.1 KEGG: dia:Dtpsy_0801 regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB YP_004125612.1 PFAM: protein of unknown function DUF502; KEGG: dia:Dtpsy_0802 protein of unknown function DUF502 YP_004125613.1 KEGG: dia:Dtpsy_0803 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_004125614.1 PFAM: NUDIX hydrolase; KEGG: dia:Dtpsy_0805 NUDIX hydrolase YP_004125615.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dia:Dtpsy_0806 endonuclease/exonuclease/phosphatase YP_004125616.1 KEGG: dia:Dtpsy_0807 phospholipase D/transphosphatidylase YP_004125617.1 KEGG: dia:Dtpsy_0808 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004125618.1 PFAM: BLUF domain protein; KEGG: dia:Dtpsy_0809 BLUF domain protein YP_004125619.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dia:Dtpsy_0810 protein of unknown function DUF6 transmembrane YP_004125620.1 KEGG: dar:Daro_2490 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004125621.1 KEGG: dar:Daro_2491 LuxR response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004125622.1 PFAM: cytochrome c class I; KEGG: azo:azo2669 cytochrome c family protein YP_004125623.1 KEGG: aav:Aave_3628 hypothetical protein YP_004125624.1 KEGG: dia:Dtpsy_0813 hypothetical protein YP_004125625.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_0885 lysine exporter protein LysE/YggA YP_004125626.1 PFAM: Amidase; KEGG: dia:Dtpsy_0815 amidase YP_004125627.1 PFAM: extracellular solute-binding protein family 5; KEGG: dia:Dtpsy_0816 extracellular solute-binding protein family 5 YP_004125628.1 KEGG: dia:Dtpsy_0817 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004125629.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dia:Dtpsy_0818 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004125630.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0819 binding-protein-dependent transport systems inner membrane component YP_004125631.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0820 binding-protein-dependent transport systems inner membrane component YP_004125632.1 KEGG: dia:Dtpsy_0821 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004125633.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: dia:Dtpsy_0822 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_004125634.1 KEGG: dia:Dtpsy_0823 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_004125635.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: dia:Dtpsy_0824 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004125636.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: ajs:Ajs_0896 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase YP_004125637.1 PFAM: outer membrane lipoprotein LolB; KEGG: dia:Dtpsy_0826 lipoprotein YP_004125638.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ajs:Ajs_0898 TPR repeat-containing protein YP_004125639.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: ajs:Ajs_0899 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_004125640.1 manually curated; KEGG: dia:Dtpsy_0829 hypothetical protein YP_004125641.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: dia:Dtpsy_0830 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_004125642.1 KEGG: dia:Dtpsy_0831 hypothetical protein YP_004125643.1 KEGG: ajs:Ajs_0903 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_004125644.1 PFAM: ATP-NAD/AcoX kinase; KEGG: dia:Dtpsy_0833 NAD(+)/NADH kinase family protein YP_004125645.1 KEGG: dia:Dtpsy_0847 heat-inducible transcription repressor; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like YP_004125646.1 KEGG: dac:Daci_4429 hypothetical protein; manually curated; PFAM: Dimethylmenaquinone methyltransferase YP_004125647.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bxe:Bxe_B0983 2-hydroxyacid dehydrogenase YP_004125648.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_3933 transcriptional regulator, LysR family YP_004125649.1 KEGG: mno:Mnod_0890 aminotransferase class I and II; manually curated; PFAM: aminotransferase class I and II YP_004125650.1 KEGG: psp:PSPPH_2462 glutamine ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004125651.1 KEGG: vap:Vapar_6370 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004125652.1 KEGG: rsl:RPSI07_mp0646 amino-acid ATP-binding ABC transporter protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125653.1 KEGG: mno:Mnod_0891 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004125654.1 KEGG: avi:Avi_7667 ABC transporter substrate binding protein (amino acid); PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004125655.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: mno:Mnod_0887 Asp/Glu/hydantoin racemase YP_004125656.1 manually curated; KEGG: bbr:BB4733 biotin carboxyl carrier protein of acetyl-CoA carboxylase YP_004125657.1 KEGG: vap:Vapar_6364 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_004125658.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: rsl:RPSI07_mp0640 conserved hypothethical protein, allophanate hydrolase subunit 2 domain; PFAM: Allophanate hydrolase subunit 2 YP_004125659.1 PFAM: LamB/YcsF family protein; KEGG: mno:Mnod_0902 LamB/YcsF family protein YP_004125660.1 KEGG: bph:Bphy_2629 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004125661.1 KEGG: bbr:BB4735 biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004125662.1 PFAM: Sporulation domain-containing protein; KEGG: aav:Aave_3575 sporulation domain-containing protein YP_004125663.1 KEGG: ajs:Ajs_0920 hypothetical protein YP_004125664.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; KEGG: dia:Dtpsy_0856 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004125665.1 KEGG: dia:Dtpsy_0857 deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_004125666.1 TIGRFAM: ribonuclease PH; KEGG: dia:Dtpsy_0858 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_004125667.1 KEGG: dia:Dtpsy_0859 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein YP_004125668.1 KEGG: dia:Dtpsy_0860 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain YP_004125669.1 PFAM: domain of unknown function DUF1732; YicC-like domain-containing protein; KEGG: ajs:Ajs_0926 hypothetical protein YP_004125670.1 KEGG: cag:Cagg_1487 hypothetical protein YP_004125671.1 KEGG: cag:Cagg_1488 hypothetical protein YP_004125672.1 KEGG: bra:BRADO4376 hypothetical protein YP_004125673.1 KEGG: chl:Chy400_2341 hypothetical protein YP_004125674.1 PFAM: GPW/gp25 family protein; KEGG: cag:Cagg_1491 gpW/GP25 family protein YP_004125675.1 KEGG: aba:Acid345_0852 hypothetical protein YP_004125676.1 KEGG: nde:NIDE2232 hypothetical protein YP_004125677.1 KEGG: nde:NIDE2231 hypothetical protein YP_004125678.1 KEGG: aba:Acid345_0855 hypothetical protein YP_004125679.1 KEGG: nde:NIDE2229 hypothetical protein YP_004125680.1 KEGG: scl:sce1839 hypothetical protein YP_004125681.1 KEGG: nde:NIDE2225 hypothetical protein YP_004125682.1 KEGG: scl:sce2110 hypothetical protein YP_004125683.1 KEGG: nde:NIDE2224 ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004125684.1 KEGG: nde:NIDE2223 hypothetical protein YP_004125685.1 KEGG: twh:TWT151 hypothetical protein YP_004125686.1 KEGG: scl:sce2087 hypothetical protein YP_004125687.1 TIGRFAM: conserved hypothetical protein; KEGG: cag:Cagg_1504 hypothetical protein YP_004125688.1 KEGG: nha:Nham_0832 phage tail sheath protein YP_004125689.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: dia:Dtpsy_0862 guanylate kinase; PFAM: guanylate kinase YP_004125690.1 KEGG: dia:Dtpsy_0863 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_004125691.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: dia:Dtpsy_0864 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein YP_004125692.1 KEGG: ajs:Ajs_0950 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004125693.1 KEGG: dia:Dtpsy_0866 hypothetical protein YP_004125694.1 KEGG: dia:Dtpsy_0867 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_004125695.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: ctt:CtCNB1_1057 3' exoribonuclease; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_004125696.1 KEGG: dia:Dtpsy_0869 NAD(P)H quinone oxidoreductase, PIG3 family; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004125697.1 TIGRFAM: triosephosphate isomerase; KEGG: dia:Dtpsy_0870 triosephosphate isomerase; PFAM: triosephosphate isomerase YP_004125698.1 KEGG: dia:Dtpsy_0871 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004125699.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: ajs:Ajs_0957 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_004125700.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: dia:Dtpsy_0873 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004125701.1 KEGG: aav:Aave_1265 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004125702.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: dia:Dtpsy_0875 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_004125703.1 KEGG: dia:Dtpsy_0876 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004125704.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: dia:Dtpsy_0877 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_004125705.1 KEGG: aav:Aave_1269 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase YP_004125706.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dia:Dtpsy_0879 NADH dehydrogenase (quinone) YP_004125707.1 KEGG: dia:Dtpsy_0880 NADH dehydrogenase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I YP_004125708.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: dia:Dtpsy_0881 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004125709.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: dia:Dtpsy_0882 NADH-ubiquinone oxidoreductase chain 4L YP_004125710.1 KEGG: dia:Dtpsy_0883 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_004125711.1 KEGG: dia:Dtpsy_0884 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004125712.1 KEGG: dia:Dtpsy_0885 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004125713.1 KEGG: dia:Dtpsy_0886 transmembrane protein YP_004125714.1 KEGG: dia:Dtpsy_0887 protein of unknown function DUF1178; manually curated; PFAM: protein of unknown function DUF1178 YP_004125715.1 KEGG: ajs:Ajs_0974 hypothetical protein YP_004125716.1 KEGG: ajs:Ajs_0977 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region YP_004125717.1 KEGG: ajs:Ajs_0978 DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_004125718.1 KEGG: dia:Dtpsy_0894 17 kDa surface antigen YP_004125719.1 PFAM: SNARE associated Golgi protein; KEGG: dia:Dtpsy_1467 SNARE associated Golgi protein YP_004125720.1 KEGG: vap:Vapar_3881 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase YP_004125721.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: dac:Daci_5908 xanthine/uracil/vitamin C permease YP_004125722.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vap:Vapar_3905 transcriptional regulator, LysR family YP_004125723.1 KEGG: vap:Vapar_3906 xanthine dehydrogenase, molybdopterin binding subunit; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_004125724.1 KEGG: dac:Daci_5910 xanthine dehydrogenase, small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain-containing protein; CO dehydrogenase flavoprotein domain protein YP_004125725.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: har:HEAR2969 hypothetical protein YP_004125726.1 KEGG: ajs:Ajs_0983 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_004125727.1 KEGG: dia:Dtpsy_0899 protein of unknown function UPF0079; manually curated; PFAM: Uncharacterised protein family UPF0079, ATPase YP_004125728.1 PFAM: Auxin Efflux Carrier; KEGG: dia:Dtpsy_0901 auxin efflux carrier YP_004125729.1 KEGG: dia:Dtpsy_0902 hypothetical protein YP_004125730.1 KEGG: dia:Dtpsy_0903 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004125731.1 KEGG: ctt:CtCNB1_2005 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein YP_004125732.1 KEGG: ajs:Ajs_0989 hypothetical protein YP_004125733.1 KEGG: dia:Dtpsy_0905 diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_004125734.1 KEGG: dia:Dtpsy_0906 diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_004125735.1 KEGG: dia:Dtpsy_0907 protein of unknown function DUF455; manually curated; PFAM: protein of unknown function DUF455 YP_004125736.1 KEGG: ajs:Ajs_0993 transferase hexapeptide protein YP_004125737.1 PFAM: Hsp33 protein; KEGG: ajs:Ajs_0994 HSP33 protein YP_004125738.1 KEGG: rfr:Rfer_1525 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004125739.1 KEGG: rfr:Rfer_1524 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004125740.1 KEGG: rfr:Rfer_1523 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004125741.1 KEGG: rfr:Rfer_1521 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125742.1 PFAM: Septum formation initiator; KEGG: dia:Dtpsy_0911 septum formation initiator YP_004125743.1 TIGRFAM: enolase; KEGG: aav:Aave_1322 phosphopyruvate hydratase; PFAM: Enolase-like YP_004125744.1 PFAM: protein of unknown function DUF1330; KEGG: dac:Daci_5107 hypothetical protein YP_004125745.1 KEGG: dac:Daci_5106 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004125746.1 TIGRFAM: CTP synthase; KEGG: dia:Dtpsy_0915 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_004125747.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: dia:Dtpsy_0916 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_004125748.1 KEGG: vap:Vapar_3441 hypothetical protein YP_004125749.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: dia:Dtpsy_0917 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase YP_004125750.1 KEGG: dia:Dtpsy_0919 fkbp-type peptidyl-prolyl cis-trans isomerase YP_004125751.1 SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: dia:Dtpsy_0920 cupin 4 family protein YP_004125752.1 KEGG: dia:Dtpsy_0921 hypothetical protein YP_004125753.1 KEGG: ajs:Ajs_1009 NlpB/DapX family lipoprotein YP_004125754.1 KEGG: dia:Dtpsy_0924 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004125755.1 PFAM: Methyltransferase type 11; KEGG: dia:Dtpsy_0925 methyltransferase type 12 YP_004125756.1 KEGG: ajs:Ajs_1012 hypothetical protein YP_004125757.1 KEGG: dia:Dtpsy_0927 major facilitator superfamily MFS_1; manually curated; PFAM: major facilitator superfamily MFS_1 YP_004125758.1 PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; KEGG: dia:Dtpsy_0928 DNA topoisomerase IV subunit B; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_004125759.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: ajs:Ajs_1016 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004125760.1 PFAM: Endoribonuclease L-PSP; KEGG: ajs:Ajs_1018 endoribonuclease L-PSP YP_004125761.1 KEGG: dia:Dtpsy_0933 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004125762.1 PFAM: Aldehyde Dehydrogenase; KEGG: dia:Dtpsy_0944 aldehyde dehydrogenase YP_004125763.1 KEGG: ajs:Ajs_1033 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004125764.1 KEGG: dia:Dtpsy_0952 transmembrane protein YP_004125765.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ajs:Ajs_1035 Rieske (2Fe-2S) domain-containing protein YP_004125766.1 KEGG: ajs:Ajs_1036 exodeoxyribonuclease VII, small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_004125767.1 PFAM: Polyprenyl synthetase; KEGG: dia:Dtpsy_0955 polyprenyl synthetase YP_004125768.1 KEGG: dia:Dtpsy_0956 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; dehydrogenase E1 component; Transketolase domain-containing protein YP_004125769.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: ctt:CtCNB1_3520 twin-arginine translocation pathway signal YP_004125770.1 KEGG: gdi:GDI_2676 DEAD/H associated; region: DEAD_assoc; pfam08494; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004125771.1 KEGG: dia:Dtpsy_0958 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004125772.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ctt:CtCNB1_3517 tripartite ATP-independent periplasmic protein YP_004125773.1 PFAM: inositol monophosphatase; KEGG: dia:Dtpsy_0963 inositol-phosphate phosphatase YP_004125774.1 KEGG: ajs:Ajs_1046 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004125775.1 TIGRFAM: serine O-acetyltransferase; KEGG: ajs:Ajs_1047 serine O-acetyltransferase YP_004125776.1 PFAM: nitroreductase; KEGG: dia:Dtpsy_0966 nitroreductase YP_004125777.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dia:Dtpsy_0967 alcohol dehydrogenase zinc-binding domain protein YP_004125778.1 KEGG: ajs:Ajs_1051 molybdopterin adenylyltransferase; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_004125779.1 PFAM: protein of unknown function DUF615; KEGG: dia:Dtpsy_0970 protein of unknown function DUF615 YP_004125780.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: dia:Dtpsy_0971 peptidase U62 modulator of DNA gyrase YP_004125781.1 KEGG: srm:SRM_02731 two-component sensor histidine kinase YP_004125782.1 KEGG: xca:xccb100_2303 siroheme synthase YP_004125783.1 PFAM: Hemolysin-type calcium-binding region; KEGG: cvi:CV_0516 calcium binding hemolysin YP_004125784.1 KEGG: reu:Reut_C5923 hypothetical protein YP_004125785.1 KEGG: mpt:Mpe_B0404 hypothetical protein YP_004125786.1 TIGRFAM: LexA repressor; KEGG: bpy:Bphyt_3718 LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004125787.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004125788.1 KEGG: dac:Daci_5142 hypothetical protein YP_004125789.1 KEGG: dac:Daci_5141 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004125790.1 KEGG: dac:Daci_2654 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type hydro-lyase tartrate/fumarate alpha region YP_004125791.1 KEGG: aav:Aave_1491 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_004125792.1 KEGG: dia:Dtpsy_0976 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004125793.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dia:Dtpsy_0979 glycine betaine transporter periplasmic subunit YP_004125794.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0980 binding-protein-dependent transport systems inner membrane component YP_004125795.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: ajs:Ajs_1065 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004125796.1 KEGG: aav:Aave_1499 acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004125797.1 KEGG: aav:Aave_1061 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_004125798.1 PFAM: protein of unknown function DUF58; KEGG: aav:Aave_1062 hypothetical protein YP_004125799.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: aav:Aave_1063 ATPase YP_004125800.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: aav:Aave_1064 peptidase S1 and S6, chymotrypsin/Hap YP_004125801.1 KEGG: dia:Dtpsy_2753 alkylhydroperoxidase like protein, AhpD family; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004125802.1 KEGG: dia:Dtpsy_2752 transcriptional regulator, TrmB; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004125803.1 KEGG: dia:Dtpsy_2751 hypothetical protein YP_004125804.1 PFAM: TatD-related deoxyribonuclease; KEGG: ajs:Ajs_3416 TatD-related deoxyribonuclease YP_004125805.1 KEGG: dia:Dtpsy_2749 hypothetical protein YP_004125806.1 KEGG: dia:Dtpsy_2748 hypothetical protein YP_004125807.1 KEGG: dia:Dtpsy_2747 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase YP_004125808.1 KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468 YP_004125809.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein YP_004125810.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_2744 short-chain dehydrogenase/reductase SDR YP_004125811.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: ajs:Ajs_3408 TRAP dicarboxylate transporter-DctP subunit YP_004125812.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: dia:Dtpsy_2742 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004125813.1 KEGG: ajs:Ajs_3406 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane YP_004125814.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dia:Dtpsy_2740 alcohol dehydrogenase zinc-binding domain protein YP_004125815.1 PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_3404 NUDIX hydrolase YP_004125816.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_3178 LysR family transcriptional regulator YP_004125817.1 KEGG: dia:Dtpsy_2738 hypothetical protein; manually curated; PFAM: Bile acid:sodium symporter YP_004125818.1 KEGG: aav:Aave_3461 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein YP_004125819.1 PFAM: metallophosphoesterase; KEGG: vap:Vapar_1261 metallophosphoesterase YP_004125820.1 KEGG: vap:Vapar_1262 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004125821.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1263 binding-protein-dependent transport systems inner membrane component YP_004125822.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1264 binding-protein-dependent transport systems inner membrane component YP_004125823.1 PFAM: extracellular solute-binding protein family 1; KEGG: vap:Vapar_1265 extracellular solute-binding protein family 1 YP_004125824.1 KEGG: vap:Vapar_1266 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004125825.1 TIGRFAM: lipoprotein signal peptidase; KEGG: dia:Dtpsy_2736 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_004125826.1 KEGG: dia:Dtpsy_2735 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_004125827.1 KEGG: ajs:Ajs_3398 bifunctional riboflavin kinase/FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase YP_004125828.1 KEGG: dia:Dtpsy_2733 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004125829.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_2732 acyl-CoA dehydrogenase domain protein YP_004125830.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_2731 acyl-CoA dehydrogenase domain protein YP_004125831.1 PFAM: protein of unknown function DUF480; KEGG: ctt:CtCNB1_0874 hypothetical protein YP_004125832.1 KEGG: dac:Daci_5372 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_004125833.1 PFAM: Fmu (Sun) domain protein; KEGG: aav:Aave_3433 Fmu (Sun) domain-containing protein YP_004125834.1 KEGG: dia:Dtpsy_2723 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_004125835.1 KEGG: ctt:CtCNB1_0883 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_004125836.1 manually curated; TIGRFAM: thioredoxin reductase; KEGG: dia:Dtpsy_2721 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004125837.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: ajs:Ajs_3382 DNA translocase FtsK YP_004125838.1 KEGG: ajs:Ajs_3381 outer membrane lipoprotein carrier protein LolA; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA YP_004125839.1 PFAM: UbiA prenyltransferase; KEGG: eba:ebA3963 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_004125840.1 KEGG: dia:Dtpsy_2718 uracil-DNA glycosylase superfamily YP_004125841.1 KEGG: ajs:Ajs_3365 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004125842.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2712 inner-membrane translocator YP_004125843.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2711 inner-membrane translocator YP_004125844.1 KEGG: dia:Dtpsy_2710 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125845.1 KEGG: ajs:Ajs_3361 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125846.1 PFAM: protein of unknown function DUF486; KEGG: dia:Dtpsy_2708 protein of unknown function DUF486 YP_004125847.1 KEGG: aav:Aave_1879 OmpA domain-containing protein YP_004125848.1 PFAM: Putitive phosphate transport regulator; KEGG: dia:Dtpsy_2707 protein of unknown function DUF47 YP_004125849.1 PFAM: phosphate transporter; KEGG: dia:Dtpsy_2706 phosphate transporter YP_004125850.1 KEGG: dia:Dtpsy_2705 hypothetical protein YP_004125851.1 KEGG: dia:Dtpsy_2704 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004125852.1 KEGG: dia:Dtpsy_2703 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_004125853.1 KEGG: dia:Dtpsy_2702 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_004125854.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: ajs:Ajs_3353 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_004125855.1 KEGG: dac:Daci_5342 ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_004125856.1 PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_3351 NUDIX hydrolase YP_004125857.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: dia:Dtpsy_2698 cobalamin biosynthesis protein CbiB YP_004125858.1 KEGG: vap:Vapar_1479 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004125859.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pne:Pnec_1354 sulphate transporter YP_004125860.1 KEGG: dia:Dtpsy_2697 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_004125861.1 KEGG: dia:Dtpsy_2696 transcriptional coactivator/pterin dehydratase; manually curated; PFAM: transcriptional coactivator/pterin dehydratase YP_004125862.1 KEGG: dia:Dtpsy_2695 STE24 endopeptidase; PFAM: peptidase M48 Ste24p YP_004125863.1 KEGG: dia:Dtpsy_2694 oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004125864.1 PFAM: Extracellular ligand-binding receptor; KEGG: vap:Vapar_5221 extracellular ligand-binding receptor YP_004125865.1 KEGG: dia:Dtpsy_2693 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004125866.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_1895 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004125867.1 KEGG: ajs:Ajs_3344 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004125868.1 PFAM: protein of unknown function DUF461; KEGG: dia:Dtpsy_2691 protein of unknown function DUF461 YP_004125869.1 KEGG: ajs:Ajs_3342 hypothetical protein YP_004125870.1 KEGG: dia:Dtpsy_2689 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004125871.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dia:Dtpsy_2688 TonB-dependent receptor YP_004125872.1 KEGG: dia:Dtpsy_2687 periplasmic component of ABC-type transport system YP_004125873.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component YP_004125874.1 KEGG: dia:Dtpsy_2681 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125875.1 PFAM: NnrS family protein; KEGG: dia:Dtpsy_2680 NnrS family protein YP_004125876.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: dia:Dtpsy_2686 TonB-dependent receptor plug YP_004125877.1 KEGG: dia:Dtpsy_2685 cobaltochelatase; PFAM: CobN/magnesium chelatase YP_004125878.1 KEGG: tdn:Suden_1229 hypothetical protein YP_004125879.1 KEGG: dia:Dtpsy_2684 hypothetical protein YP_004125880.1 PFAM: Protein of unknown function DUF2149; KEGG: dia:Dtpsy_2683 hypothetical protein YP_004125881.1 KEGG: sgl:SG1173 phage integrase YP_004125882.1 KEGG: aav:Aave_1735 hypothetical protein YP_004125883.1 KEGG: pna:Pnap_2277 hypothetical protein YP_004125884.1 KEGG: see:SNSL254_p_0061 hypothetical protein YP_004125885.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: mlo:mlr7992 DNA modification methylase YP_004125886.1 KEGG: rsh:Rsph17029_0652 hypothetical protein YP_004125887.1 KEGG: amd:AMED_0550 exopolysaccharide biosynthesis protein YP_004125888.1 KEGG: dac:Daci_2614 hypothetical protein YP_004125889.1 KEGG: ang:An16g04440 hypothetical protein YP_004125890.1 KEGG: pol:Bpro_2970 hypothetical protein YP_004125891.1 PFAM: replication gene A; KEGG: dac:Daci_2615 replication gene A YP_004125892.1 KEGG: dac:Daci_2616 hypothetical protein YP_004125893.1 KEGG: amd:AMED_8985 hypothetical protein YP_004125894.1 KEGG: rso:RSc1667 hypothetical protein YP_004125895.1 PFAM: transcriptional activator Ogr/delta; KEGG: dac:Daci_2617 transcriptional activator Ogr/delta YP_004125896.1 KEGG: pct:PC1_2629 hypothetical protein YP_004125897.1 KEGG: aau:AAur_4085 transcriptional regulator YP_004125898.1 KEGG: kse:Ksed_24630 capsular exopolysaccharide biosynthesis protein YP_004125899.1 KEGG: aav:Aave_3589 phage repressor; manually curated; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004125900.1 KEGG: eic:NT01EI_3144 hypothetical protein YP_004125901.1 KEGG: aav:Aave_1749 hypothetical protein YP_004125902.1 PFAM: Protein of unknown function DUF2442; KEGG: avn:Avin_37320 hypothetical protein YP_004125903.1 KEGG: eba:ebA5912 hypothetical protein YP_004125904.1 KEGG: dac:Daci_2620 late control D family protein YP_004125905.1 PFAM: P2 GpU family protein; KEGG: dac:Daci_2621 P2 GpU family protein YP_004125906.1 KEGG: pna:Pnap_3313 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_004125907.1 KEGG: dsi:Dsim_GD23071 GD23071 gene product from transcript GD23071-RA YP_004125908.1 PFAM: P2 GpE family protein; KEGG: dac:Daci_2623 P2 GpE family protein YP_004125909.1 PFAM: tail E family protein; KEGG: dac:Daci_2624 tail E family protein YP_004125910.1 KEGG: dac:Daci_2625 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_004125911.1 KEGG: dac:Daci_2626 tail sheath protein YP_004125912.1 KEGG: hsm:HSM_0915 hypothetical protein YP_004125913.1 KEGG: mag:amb0391 hypothetical protein YP_004125914.1 KEGG: spv:SPH_1885 cell wall surface anchor family protein YP_004125915.1 KEGG: mca:MCA2902 hypothetical protein YP_004125916.1 KEGG: mca:MCA2904 hypothetical protein YP_004125917.1 KEGG: mca:MCA2905 prophage MuMc02 tail fiber domain-containing protein YP_004125918.1 PFAM: Baseplate J family protein; KEGG: dac:Daci_2635 baseplate J family protein YP_004125919.1 PFAM: GPW/gp25 family protein; KEGG: dac:Daci_2636 gpW/GP25 family protein YP_004125920.1 TIGRFAM: phage baseplate assembly protein V; KEGG: dac:Daci_2637 phage baseplate assembly protein V YP_004125921.1 TIGRFAM: phage virion morphogenesis protein; KEGG: csa:Csal_1389 phage virion morphogenesis (tail completion) protein YP_004125922.1 KEGG: vvi:100251070 hypothetical protein LOC100251070 YP_004125923.1 KEGG: dac:Daci_2638 P2 phage tail completion R family protein YP_004125924.1 PFAM: Protein of unknown function DUF2514; KEGG: dac:Daci_2639 hypothetical protein YP_004125925.1 KEGG: rlt:Rleg2_1424 major facilitator superfamily MFS_1 YP_004125926.1 PFAM: glycoside hydrolase family 24; KEGG: eba:ebA7232 phage-related lysozyme YP_004125927.1 KEGG: dac:Daci_2641 hypothetical protein YP_004125928.1 PFAM: tail X family protein; KEGG: dac:Daci_2642 tail X family protein YP_004125929.1 PFAM: head completion protein; KEGG: bps:BPSL0168 phage head completion/stabilization protein YP_004125930.1 PFAM: small terminase subunit; KEGG: pna:Pnap_3292 phage small terminase subunit YP_004125931.1 KEGG: csa:Csal_1397 phage major capsid protein, P2; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_004125932.1 PFAM: capsid scaffolding; KEGG: pfs:PFLU1589 capsid scafolding protein YP_004125933.1 KEGG: pna:Pnap_3289 hypothetical protein YP_004125934.1 KEGG: hse:Hsero_0910 bacteriophage capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_004125935.1 KEGG: aav:Aave_1911 guanosine 5'-monophosphate oxidoreductase; TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase YP_004125936.1 PFAM: UvrD/REP helicase; KEGG: dia:Dtpsy_2677 UvrD/REP helicase YP_004125937.1 PFAM: protein of unknown function DUF839; KEGG: aav:Aave_1926 exported alkaline phosphatase YP_004125938.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; KEGG: dba:Dbac_1471 diguanylate cyclase; SMART: GGDEF domain containing protein; extracellular solute-binding protein family 3 YP_004125939.1 KEGG: ajs:Ajs_3321 hypothetical protein YP_004125940.1 TIGRFAM: homoserine kinase; KEGG: ajs:Ajs_3320 homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_004125941.1 KEGG: dia:Dtpsy_2671 hypothetical protein YP_004125942.1 KEGG: ajs:Ajs_3318 hypothetical protein YP_004125943.1 SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; TIGRFAM: DNA polymerase I; KEGG: dia:Dtpsy_2669 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease YP_004125944.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B1464 transcriptional regulator, LysR family YP_004125945.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: afv:AFLA_059270 short-chain dehydrogenases/reductase, putative YP_004125946.1 KEGG: dac:Daci_0250 hypothetical protein YP_004125947.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bpt:Bpet3546 hypothetical protein YP_004125948.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet4163 LysR family transcriptional regulator YP_004125949.1 KEGG: bpt:Bpet4162 secreted protein YP_004125950.1 KEGG: bpt:Bpet4161 acyl-CoA transferase/carnitine dehydratase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_004125951.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpt:Bpet4160 enoyl-CoA hydratase YP_004125952.1 KEGG: dia:Dtpsy_2668 carboxymethylenebutenolidase YP_004125953.1 PFAM: zinc/iron permease; KEGG: dia:Dtpsy_2667 zinc/iron permease YP_004125954.1 KEGG: ajs:Ajs_3314 LytR/AlgR family transcriptional regulator; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver YP_004125955.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: dia:Dtpsy_2506 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004125956.1 KEGG: ppw:PputW619_2172 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; Mannitol dehydrogenase domain YP_004125957.1 KEGG: dia:Dtpsy_2505 hypothetical protein YP_004125958.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: ajs:Ajs_3157 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_004125959.1 KEGG: dia:Dtpsy_2503 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004125960.1 KEGG: dia:Dtpsy_2502 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_004125961.1 KEGG: dia:Dtpsy_2501 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004125962.1 KEGG: dia:Dtpsy_2500 osmolarity response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004125963.1 PFAM: protein of unknown function DUF541; KEGG: dia:Dtpsy_2499 protein of unknown function DUF541 YP_004125964.1 KEGG: dia:Dtpsy_2498 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_004125965.1 PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_3150 alpha/beta hydrolase fold YP_004125966.1 TIGRFAM: RelA/SpoT family protein; KEGG: ajs:Ajs_3149 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; amino acid-binding ACT domain protein YP_004125967.1 KEGG: dia:Dtpsy_2387 hypothetical protein YP_004125968.1 KEGG: dia:Dtpsy_2389 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein YP_004125969.1 KEGG: dia:Dtpsy_2495 polyhydroxyalkonate synthesis repressor, PhaR; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein YP_004125970.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: dia:Dtpsy_2494 ribosomal protein S12 methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB YP_004125971.1 KEGG: dia:Dtpsy_2493 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type YP_004125972.1 KEGG: dia:Dtpsy_2492 transcriptional regulator YP_004125973.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_3144 LysR family transcriptional regulator YP_004125974.1 PFAM: pyruvate carboxyltransferase; KEGG: dia:Dtpsy_2490 pyruvate carboxyltransferase YP_004125975.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_3142 L-carnitine dehydratase/bile acid-inducible protein F YP_004125976.1 KEGG: dia:Dtpsy_2488 hypothetical protein YP_004125977.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: ajs:Ajs_3139 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004125978.1 PFAM: methyladenine glycosylase; KEGG: neu:NE0447 hypothetical protein YP_004125979.1 KEGG: rhi:NGR_b07690 hypothetical protein YP_004125980.1 KEGG: dia:Dtpsy_2485 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004125981.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; KEGG: ajs:Ajs_3137 DNA primase; SMART: Toprim sub domain-containing protein YP_004125982.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dia:Dtpsy_2483 AMP-dependent synthetase and ligase YP_004125983.1 KEGG: maq:Maqu_3283 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004125984.1 PFAM: regulatory protein LysR; KEGG: ajs:Ajs_3130 molybdate metabolism transcriptional regulator YP_004125985.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3129 binding-protein-dependent transport systems inner membrane component YP_004125986.1 KEGG: ajs:Ajs_3128 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125987.1 PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_3127 extracellular solute-binding protein YP_004125988.1 KEGG: pna:Pnap_0462 hypothetical protein YP_004125989.1 TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain-containing protein; KEGG: ajs:Ajs_3126 molybdate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004125990.1 KEGG: ajs:Ajs_3125 molybdate ABC transporter, inner membrane subunit; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004125991.1 KEGG: dia:Dtpsy_2470 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004125992.1 PFAM: TOBE domain-containing protein; regulatory protein LysR; KEGG: dia:Dtpsy_2469 transcriptional regulator, ModE family YP_004125993.1 KEGG: dia:Dtpsy_2468 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125994.1 KEGG: ajs:Ajs_3121 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004125995.1 PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_2466 extracellular ligand-binding receptor YP_004125996.1 PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3119 extracellular ligand-binding receptor YP_004125997.1 KEGG: dia:Dtpsy_2464 inner-membrane translocator; manually curated; PFAM: inner-membrane translocator YP_004125998.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2463 inner-membrane translocator YP_004125999.1 KEGG: ajs:Ajs_3116 secreted hydrolase-like protein YP_004126000.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ajs:Ajs_3115 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_004126001.1 PFAM: protein of unknown function DUF214; KEGG: dia:Dtpsy_2460 protein of unknown function DUF214 YP_004126002.1 PFAM: heat shock protein Hsp20; KEGG: ajs:Ajs_3113 heat shock protein HSP20 YP_004126003.1 KEGG: dia:Dtpsy_2458 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126004.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: dia:Dtpsy_2457 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_004126005.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3110 Bcr/CflA subfamily drug resistance transporter YP_004126006.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: dia:Dtpsy_2455 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004126007.1 PFAM: histidine triad (HIT) protein; KEGG: dia:Dtpsy_2454 histidine triad (HIT) protein YP_004126008.1 PFAM: porin Gram-negative type; KEGG: dia:Dtpsy_2452 porin gram-negative type YP_004126009.1 KEGG: dia:Dtpsy_2451 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp YP_004126010.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: dia:Dtpsy_2450 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein YP_004126011.1 KEGG: dia:Dtpsy_2447 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126012.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2446 inner-membrane translocator YP_004126013.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2445 inner-membrane translocator YP_004126014.1 PFAM: basic membrane lipoprotein; KEGG: dia:Dtpsy_2444 basic membrane lipoprotein YP_004126015.1 PFAM: basic membrane lipoprotein; KEGG: dia:Dtpsy_2443 basic membrane lipoprotein YP_004126016.1 PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc3407 oxidoreductase protein YP_004126017.1 KEGG: rso:RSc3408 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126018.1 KEGG: rso:RSc3409 amino-acid transmembrane ABC transporter protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004126019.1 KEGG: rsl:RPSI07_0031 amino acid-binding periplasmic (Pbp) abc transporter protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004126020.1 KEGG: rso:RSc3411 transcription regulator protein; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004126021.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: reu:Reut_C6271 hypothetical protein YP_004126022.1 TIGRFAM: adenosine deaminase; KEGG: dia:Dtpsy_2442 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_004126023.1 KEGG: bav:BAV1558 acyl coenzyme A thioester hydrolase; PFAM: acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase YP_004126024.1 PFAM: extracellular solute-binding protein family 5; KEGG: bav:BAV1559 ABC transporter, substrate binding protein YP_004126025.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: rsl:RPSI07_1508 dipeptide transport ATP-binding (ABC superfamily); SMART: AAA ATPase YP_004126026.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: rpf:Rpic12D_1762 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004126027.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1562 ABC transporter, permease protein YP_004126028.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1563 ABC transporter, permease protein YP_004126029.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsc:RCFBP_11452 transcriptional regulator, LysR family YP_004126030.1 TIGRFAM: arylformamidase; KEGG: dia:Dtpsy_2438 arylformamidase; PFAM: cyclase family protein YP_004126031.1 PFAM: protein of unknown function UPF0153; KEGG: dia:Dtpsy_2436 protein of unknown function UPF0153 YP_004126032.1 PFAM: FeoA family protein; KEGG: dia:Dtpsy_2435 FeoA family protein YP_004126033.1 KEGG: dia:Dtpsy_2434 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein YP_004126034.1 KEGG: dac:Daci_2177 hypothetical protein YP_004126035.1 PFAM: protein of unknown function UPF0153; KEGG: ajs:Ajs_3004 hypothetical protein YP_004126036.1 KEGG: pde:Pden_4005 hypothetical protein YP_004126037.1 KEGG: bbr:BB2477 hypothetical protein YP_004126038.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: dia:Dtpsy_2430 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004126039.1 KEGG: dia:Dtpsy_2429 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_004126040.1 KEGG: dia:Dtpsy_2428 hypothetical protein YP_004126041.1 manually curated; KEGG: vap:Vapar_5710 hypothetical protein YP_004126042.1 KEGG: rfr:Rfer_0842 hypothetical protein YP_004126043.1 KEGG: dia:Dtpsy_2427 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_004126044.1 KEGG: ajs:Ajs_2999 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_004126045.1 KEGG: ajs:Ajs_2998 hypothetical protein YP_004126046.1 PFAM: UspA domain-containing protein; KEGG: dia:Dtpsy_2423 UspA domain protein YP_004126047.1 KEGG: dia:Dtpsy_2422 hypothetical protein YP_004126048.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: ajs:Ajs_2994 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004126049.1 TIGRFAM: gamma-glutamyltransferase; KEGG: aci:ACIAD0929 gamma-glutamyltranspeptidase precursor; PFAM: gamma-glutamyltranspeptidase YP_004126050.1 KEGG: aav:Aave_1971 chromosomal replication initiator, DnaA; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA YP_004126051.1 KEGG: dia:Dtpsy_2419 HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_004126052.1 KEGG: dia:Dtpsy_2418 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region YP_004126053.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: ajs:Ajs_2990 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_004126054.1 PFAM: glycosyl transferase family 2; KEGG: bav:BAV2928 bactoprenol glucosyl transferase YP_004126055.1 PFAM: glycosyl transferase family 39; KEGG: dac:Daci_2190 glycosyl transferase family protein YP_004126056.1 PFAM: GtrA family protein; KEGG: dar:Daro_2757 GtrA-like protein YP_004126057.1 PFAM: YdjC family protein; KEGG: vap:Vapar_5574 YdjC family protein YP_004126058.1 KEGG: ajs:Ajs_2989 hypothetical protein YP_004126059.1 KEGG: reu:Reut_B5440 hypothetical protein YP_004126060.1 KEGG: reu:Reut_B5441 uroporphyrinogen decarboxylase YP_004126061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B5443 regulatory protein, LysR:LysR, substrate-binding YP_004126062.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: hch:HCH_06702 cysteine synthase YP_004126063.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: dia:Dtpsy_2414 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_004126064.1 PFAM: TrkA-N domain protein; KEGG: ajs:Ajs_2986 NAD-dependent epimerase/dehydratase YP_004126065.1 KEGG: dia:Dtpsy_2412 hypothetical protein YP_004126066.1 KEGG: dia:Dtpsy_2411 hypothetical protein YP_004126067.1 KEGG: ajs:Ajs_3918 transposase, IS4 family protein; manually curated; PFAM: transposase IS4 family protein YP_004126068.1 KEGG: ajs:Ajs_2981 hypothetical protein YP_004126069.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: dia:Dtpsy_2408 L-carnitine dehydratase/bile acid-inducible protein F YP_004126070.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_2407 acyl-CoA dehydrogenase domain protein YP_004126071.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_2978 LysR family transcriptional regulator YP_004126072.1 PFAM: LrgB family protein; KEGG: dia:Dtpsy_2405 LrgB family protein YP_004126073.1 PFAM: LrgA family protein; KEGG: dia:Dtpsy_2404 LrgA family protein YP_004126074.1 KEGG: dia:Dtpsy_2403 hypothetical protein YP_004126075.1 KEGG: dgr:Dgri_GH23134 GH23134 gene product from transcript GH23134-RA YP_004126076.1 KEGG: ajs:Ajs_2619 hypothetical protein YP_004126077.1 PFAM: protein of unknown function DUF1555; KEGG: tbd:Tbd_0194 hypothetical protein YP_004126078.1 TIGRFAM: phage head-tail adaptor; KEGG: bcm:Bcenmc03_1291 phage head-tail adaptor YP_004126079.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: bcm:Bcenmc03_1290 phage protein DNA packaging protein YP_004126080.1 PFAM: Terminase; KEGG: pap:PSPA7_5155 phage terminase, large subunit YP_004126081.1 KEGG: xbo:XBJ1_2042 terminase small subunit YP_004126082.1 KEGG: pap:PSPA7_5153 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004126083.1 KEGG: bcm:Bcenmc03_1286 HK97 family phage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_004126084.1 KEGG: bcm:Bcenmc03_1285 HK97 family phage prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97 YP_004126085.1 KEGG: bcm:Bcenmc03_1284 major capsid protein HK97 YP_004126086.1 manually curated; KEGG: ajs:Ajs_1730 hypothetical protein YP_004126087.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004126088.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004126089.1 KEGG: rpi:Rpic_2748 hypothetical protein YP_004126090.1 PFAM: Prophage CP4-57 regulatory; KEGG: bra:BRADO6209 prophage CP4-57 regulatory protein YP_004126091.1 KEGG: tbd:Tbd_2676 hypothetical protein YP_004126092.1 KEGG: rpc:RPC_3988 tetratricopeptide TPR_2 YP_004126093.1 PFAM: integrase family protein; KEGG: lch:Lcho_2200 integrase family protein YP_004126094.1 KEGG: ajs:Ajs_2610 peptidase M14, carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_004126095.1 KEGG: ajs:Ajs_2609 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004126096.1 KEGG: dia:Dtpsy_1200 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126097.1 KEGG: ajs:Ajs_2606 TRAP transporter solute receptor TAXI family protein YP_004126098.1 PFAM: peptidase S58 DmpA; KEGG: ajs:Ajs_2605 peptidase S58, DmpA YP_004126099.1 PFAM: protein of unknown function DUF411; KEGG: dia:Dtpsy_1206 protein of unknown function DUF411 YP_004126100.1 PFAM: blue (type 1) copper domain protein; KEGG: ajs:Ajs_2601 blue (type1) copper domain-containing protein YP_004126101.1 KEGG: dia:Dtpsy_1211 hypothetical protein YP_004126102.1 KEGG: dia:Dtpsy_1212 protein of unknown function DUF161; manually curated; PFAM: protein of unknown function DUF161 YP_004126103.1 KEGG: ajs:Ajs_2594 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004126104.1 KEGG: dia:Dtpsy_1215 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_004126105.1 PFAM: protein of unknown function DUF140; KEGG: dia:Dtpsy_1216 protein of unknown function DUF140 YP_004126106.1 PFAM: Mammalian cell entry related domain protein; KEGG: dia:Dtpsy_1217 mammalian cell entry related domain protein YP_004126107.1 KEGG: dia:Dtpsy_1218 hypothetical protein YP_004126108.1 KEGG: vap:Vapar_0122 hypothetical protein YP_004126109.1 KEGG: ajs:Ajs_2588 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein YP_004126110.1 KEGG: ajs:Ajs_2587 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004126111.1 PFAM: Amidase; KEGG: ajs:Ajs_2586 amidase YP_004126112.1 KEGG: ajs:Ajs_2585 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_004126113.1 KEGG: dia:Dtpsy_1224 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_004126114.1 KEGG: dia:Dtpsy_1225 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004126115.1 KEGG: dia:Dtpsy_1226 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_004126116.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: dia:Dtpsy_1227 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_004126117.1 PFAM: phosphatidate cytidylyltransferase; KEGG: dia:Dtpsy_1228 phosphatidate cytidylyltransferase YP_004126118.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: dia:Dtpsy_1229 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein YP_004126119.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: ajs:Ajs_2578 peptidase RseP; SMART: PDZ/DHR/GLGF domain protein YP_004126120.1 KEGG: dia:Dtpsy_1231 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004126121.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: ajs:Ajs_2576 outer membrane chaperone Skp (OmpH) YP_004126122.1 KEGG: dia:Dtpsy_1233 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_004126123.1 KEGG: aav:Aave_1834 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004126124.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: ajs:Ajs_2573 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004126125.1 PFAM: glycosyl transferase family 19; manually curated; KEGG: dia:Dtpsy_1236 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase YP_004126126.1 KEGG: dia:Dtpsy_1237 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_004126127.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dia:Dtpsy_1238 tRNA/rRNA methyltransferase (SpoU) YP_004126128.1 PFAM: integrase family protein; KEGG: glo:Glov_1428 integrase family protein YP_004126129.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004126130.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004126131.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: ctt:CtCNB1_2987 inositol YP_004126132.1 KEGG: dia:Dtpsy_2249 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase YP_004126133.1 manually curated; KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_004126134.1 TIGRFAM: diaminopimelate dehydrogenase; KEGG: ajs:Ajs_2757 diaminopimelate dehydrogenase; PFAM: dihydrodipicolinate reductase YP_004126135.1 PFAM: alpha/beta hydrolase fold; KEGG: dia:Dtpsy_2246 alpha/beta hydrolase fold protein YP_004126136.1 PFAM: extracellular solute-binding protein family 1; KEGG: dac:Daci_4801 extracellular solute-binding protein YP_004126137.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4800 binding-protein-dependent transport systems inner membrane component YP_004126138.1 KEGG: dac:Daci_4799 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004126139.1 PFAM: aldo/keto reductase; KEGG: ajs:Ajs_2755 aldo/keto reductase YP_004126140.1 KEGG: ajs:Ajs_2754 YbaK/EbsC protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_004126141.1 PFAM: protein of unknown function DUF205; KEGG: dia:Dtpsy_2243 protein of unknown function DUF205 YP_004126142.1 KEGG: dia:Dtpsy_2242 metal dependent phosphohydrolase YP_004126143.1 KEGG: ajs:Ajs_2751 hypothetical protein YP_004126144.1 PFAM: protein of unknown function DUF520; KEGG: ajs:Ajs_2750 nucleotide-binding protein YP_004126145.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: dia:Dtpsy_2239 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein YP_004126146.1 KEGG: dac:Daci_4779 SPW repeat-containing protein YP_004126147.1 KEGG: dia:Dtpsy_2235 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_004126148.1 KEGG: dia:Dtpsy_2234 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_004126149.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: reu:Reut_C6172 acetone carboxylase, beta subunit YP_004126150.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: tmz:Tmz1t_3470 hydantoinase B/oxoprolinase YP_004126151.1 PFAM: Acetone carboxylase gamma subunit; KEGG: eba:ebA4702 acetone carboxylase gamma subunit YP_004126152.1 KEGG: tmz:Tmz1t_3466 GAF modulated sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004126153.1 TIGRFAM: argininosuccinate synthase; KEGG: dia:Dtpsy_2233 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_004126154.1 PFAM: protein of unknown function DUF1255; KEGG: dia:Dtpsy_2232 protein of unknown function DUF1255 YP_004126155.1 KEGG: dia:Dtpsy_2231 17 kDa surface antigen YP_004126156.1 PFAM: arsenate reductase and related; KEGG: dia:Dtpsy_2230 arsenate reductase and related YP_004126157.1 TIGRFAM: FolC bifunctional protein; KEGG: ajs:Ajs_2739 FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004126158.1 PFAM: Sporulation domain-containing protein; KEGG: dia:Dtpsy_2228 sporulation domain protein YP_004126159.1 PFAM: Colicin V production protein; Protein of unknown function DUF2474; KEGG: dia:Dtpsy_2227 colicin V production protein YP_004126160.1 KEGG: dia:Dtpsy_2226 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_004126161.1 TIGRFAM: O-succinylhomoserine sulfhydrylase; KEGG: dac:Daci_4768 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004126162.1 KEGG: dia:Dtpsy_2224 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004126163.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_2108 short-chain dehydrogenase/reductase SDR YP_004126164.1 KEGG: cfl:Cfla_1172 lipoate--protein ligase YP_004126165.1 manually curated; KEGG: cci:CC1G_12013 tRNA (guanine-N2-)-methyltransferase YP_004126167.1 KEGG: dia:Dtpsy_2523 transposase IS66 YP_004126168.1 PFAM: IS66 Orf2 family protein; KEGG: rfr:Rfer_2710 IS66 Orf2 like YP_004126169.1 PFAM: transposase IS3/IS911 family protein; KEGG: rfr:Rfer_2709 transposase IS3/IS911 YP_004126170.1 KEGG: cbt:CLH_2513 1,4-beta-N-acetylmuramidase YP_004126171.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_3784 integrase catalytic subunit YP_004126172.1 PFAM: transposase IS3/IS911 family protein; KEGG: ctt:CtCNB1_1899 transposase IS3/IS911 YP_004126173.1 KEGG: xac:XAC3233 transposase YP_004126174.1 KEGG: reu:Reut_C5919 hypothetical protein YP_004126175.1 KEGG: mpt:Mpe_B0404 hypothetical protein YP_004126176.1 TIGRFAM: LexA repressor; KEGG: bpy:Bphyt_3718 LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004126177.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004126178.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004126179.1 PFAM: extracellular solute-binding protein family 1; KEGG: ajs:Ajs_1607 extracellular solute-binding protein YP_004126180.1 KEGG: dia:Dtpsy_1366 phasin family protein; TIGRFAM: phasin family protein; PFAM: Phasin YP_004126181.1 PFAM: thioesterase superfamily protein; KEGG: dia:Dtpsy_1367 thioesterase superfamily protein YP_004126182.1 KEGG: dia:Dtpsy_1368 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_004126183.1 KEGG: ajs:Ajs_2491 transmembrane protein YP_004126184.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: dia:Dtpsy_1370 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004126185.1 PFAM: protein of unknown function DUF195; KEGG: azo:azo2787 RumC-like protein YP_004126186.1 PFAM: major facilitator superfamily MFS_1; KEGG: dia:Dtpsy_1372 major facilitator superfamily MFS_1 YP_004126187.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: ajs:Ajs_2487 hypothetical protein YP_004126188.1 KEGG: dia:Dtpsy_1374 camphor resistance protein CrcB; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_004126189.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: dia:Dtpsy_1379 hypothetical protein YP_004126190.1 PFAM: Na+/H+ antiporter subunit; KEGG: dia:Dtpsy_1381 Na+/H+ antiporter subunit YP_004126191.1 PFAM: multiple resistance and pH regulation protein F; KEGG: dia:Dtpsy_1382 multiple resistance and pH regulation protein F YP_004126192.1 PFAM: cation antiporter; KEGG: dia:Dtpsy_1383 monovalent cation/H+ antiporter subunit E YP_004126193.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ajs:Ajs_2476 monovalent cation/H+ antiporter subunit D YP_004126194.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: dia:Dtpsy_1385 monovalent cation/H+ antiporter subunit C YP_004126195.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: dia:Dtpsy_1386 monovalent cation/H+ antiporter subunit A YP_004126196.1 KEGG: ajs:Ajs_2473 hypothetical protein YP_004126197.1 KEGG: dia:Dtpsy_1389 hypothetical protein YP_004126198.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dia:Dtpsy_2031 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004126199.1 PFAM: BolA family protein; KEGG: dia:Dtpsy_2030 BolA family protein YP_004126200.1 KEGG: ajs:Ajs_1675 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A YP_004126201.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: dia:Dtpsy_2028 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B YP_004126202.1 PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_2025 extracellular ligand-binding receptor YP_004126203.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2024 inner-membrane translocator YP_004126204.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2023 inner-membrane translocator YP_004126205.1 KEGG: dia:Dtpsy_2022 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126206.1 KEGG: dia:Dtpsy_2021 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126207.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_1684 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase YP_004126208.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: dia:Dtpsy_2019 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004126209.1 KEGG: ctt:CtCNB1_1865 glutamate-binding protein precursor; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004126210.1 KEGG: dac:Daci_4388 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004126211.1 KEGG: ctt:CtCNB1_1867 amino acid ABC transporter, permease protein PEB1; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004126212.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_2017 acyl-CoA dehydrogenase domain protein YP_004126213.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: dia:Dtpsy_2016 NAD(P)H dehydrogenase (quinone) YP_004126214.1 KEGG: bpt:Bpet3196 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane YP_004126215.1 KEGG: psa:PST_2393 NAD-specific glutamate dehydrogenase YP_004126216.1 KEGG: eli:ELI_12715 phosphoribosylamine--glycine ligase YP_004126218.1 KEGG: bvi:Bcep1808_6849 hypothetical protein; manually curated; PFAM: VRR-NUC domain-containing protein YP_004126219.1 PFAM: Primase 2; KEGG: tin:Tint_1139 primase 2 YP_004126220.1 KEGG: ddr:Deide_01150 glutaminyl-tRNA synthetase YP_004126221.1 KEGG: vap:Vapar_3800 hypothetical protein YP_004126222.1 KEGG: ajs:Ajs_3336 hypothetical protein YP_004126223.1 KEGG: pna:Pnap_0969 hypothetical protein YP_004126224.1 PFAM: integrase family protein; KEGG: tin:Tint_1145 integrase family protein YP_004126225.1 KEGG: dia:Dtpsy_1835 type I secretion outer membrane protein, TolC family; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_004126226.1 SMART: Rhodanese domain protein; KEGG: dia:Dtpsy_1836 rhodanese domain protein YP_004126227.1 PFAM: Methyltransferase type 11; KEGG: dia:Dtpsy_1837 protein-L-isoaspartate(D-aspartate) O-methyltransferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_004126228.1 PFAM: regulatory protein TetR; KEGG: ajs:Ajs_2029 TetR family transcriptional regulator YP_004126229.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: ajs:Ajs_2030 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_004126230.1 KEGG: ajs:Ajs_2032 hypothetical protein YP_004126231.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dia:Dtpsy_1842 TonB-dependent receptor YP_004126232.1 KEGG: ajs:Ajs_2034 hypothetical protein YP_004126233.1 KEGG: ajs:Ajs_2035 chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter YP_004126234.1 PFAM: Auxin Efflux Carrier; KEGG: dia:Dtpsy_1882 auxin efflux carrier YP_004126235.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: dia:Dtpsy_1881 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_004126236.1 PFAM: ChaC family protein; KEGG: dia:Dtpsy_1879 ChaC family protein YP_004126237.1 PFAM: OmpA/MotB domain protein; KEGG: dia:Dtpsy_1878 OmpA/MotB domain protein YP_004126238.1 PFAM: protein of unknown function DUF72; KEGG: dia:Dtpsy_1999 protein of unknown function DUF72 YP_004126239.1 KEGG: dia:Dtpsy_1998 hypothetical protein YP_004126240.1 KEGG: ajs:Ajs_1707 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_004126241.1 KEGG: bbr:BB0544 hypothetical protein YP_004126242.1 PFAM: protein of unknown function DUF35; KEGG: bbr:BB0545 hypothetical protein YP_004126243.1 KEGG: bbr:BB0546 acetyl-CoA acetyltransferase YP_004126244.1 KEGG: reu:Reut_A0842 hypothetical protein YP_004126245.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpd:RPD_4223 short-chain dehydrogenase/reductase SDR YP_004126246.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB0547 ligase YP_004126247.1 KEGG: bbr:BB0564 hypothetical protein YP_004126248.1 KEGG: bbr:BB0548 LacI family regulatory protein; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004126249.1 PFAM: Citrate synthase; KEGG: rme:Rmet_4144 citrate synthase YP_004126250.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_B4958 L-carnitine dehydratase/bile acid-inducible protein F YP_004126251.1 KEGG: aav:Aave_3937 hypothetical protein YP_004126252.1 KEGG: rme:Rmet_4146 extra-cytoplasmic solute receptor YP_004126253.1 PFAM: amidohydrolase 2; KEGG: bam:Bamb_4804 amidohydrolase 2 YP_004126254.1 KEGG: cti:pRALTA_0434 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004126255.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_1708 signal transduction protein YP_004126256.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ajs:Ajs_1712 hydratase/decarboxylase YP_004126257.1 KEGG: ajs:Ajs_1713 alpha/beta hydrolase domain-containing protein YP_004126258.1 PFAM: thioesterase superfamily protein; GCN5-related N-acetyltransferase; KEGG: dia:Dtpsy_1990 thioesterase superfamily protein YP_004126259.1 PFAM: protein of unknown function DUF336; KEGG: dac:Daci_1203 hypothetical protein YP_004126260.1 KEGG: dac:Daci_1204 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004126261.1 KEGG: dac:Daci_1205 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004126262.1 PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_2202 major facilitator transporter YP_004126263.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dia:Dtpsy_2009 CMP/dCMP deaminase zinc-binding YP_004126264.1 KEGG: ajs:Ajs_1715 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_004126265.1 PFAM: aminodeoxychorismate lyase; KEGG: ajs:Ajs_1716 aminodeoxychorismate lyase YP_004126266.1 TIGRFAM: thymidylate kinase; KEGG: dia:Dtpsy_1987 thymidylate kinase; PFAM: thymidylate kinase YP_004126267.1 KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase YP_004126268.1 PFAM: type IV pilus assembly PilZ; KEGG: dia:Dtpsy_1985 type IV pilus assembly PilZ YP_004126269.1 KEGG: ajs:Ajs_1720 TatD family hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_004126270.1 KEGG: dia:Dtpsy_1983 ankyrin YP_004126271.1 KEGG: hoh:Hoch_1597 hypothetical protein YP_004126272.1 KEGG: app:CAP2UW1_0424 hypothetical protein YP_004126273.1 KEGG: aav:Aave_3515 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004126274.1 PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B1760 major facilitator superfamily transporter AAHS family protein YP_004126275.1 PFAM: LamB/YcsF family protein; KEGG: aav:Aave_3513 LamB/YcsF family protein YP_004126276.1 PFAM: protein of unknown function DUF1445; KEGG: reh:H16_B1759 hypothetical protein YP_004126277.1 SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: urea amidolyase related protein; KEGG: reu:Reut_A2450 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1 YP_004126278.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding YP_004126279.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: dia:Dtpsy_1982 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; SMART: AAA ATPase YP_004126280.1 KEGG: dia:Dtpsy_1981 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein YP_004126281.1 KEGG: dia:Dtpsy_1980 peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_004126282.1 TIGRFAM: tol-pal system protein YbgF; KEGG: ajs:Ajs_1725 TPR repeat-containing protein YP_004126283.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: aav:Aave_3403 UBA/ThiF-type NAD/FAD binding protein YP_004126284.1 PFAM: integrase family protein; KEGG: hse:Hsero_0876 site-specific phage recombinase/integrase YP_004126285.1 manually curated; KEGG: rpt:Rpal_3050 hypothetical protein YP_004126286.1 KEGG: pan:PODANSg1201 hypothetical protein YP_004126287.1 KEGG: bph:Bphy_1918 hypothetical protein YP_004126288.1 KEGG: spx:SPG_1105 hypothetical protein YP_004126289.1 KEGG: mes:Meso_1184 hypothetical protein YP_004126290.1 KEGG: scb:SCAB_33391 hypothetical protein YP_004126291.1 KEGG: dac:Daci_3203 hypothetical protein YP_004126292.1 PFAM: YqaJ viral recombinase family; KEGG: dac:Daci_1915 exonuclease, phage-type YP_004126293.1 PFAM: ERF family protein; KEGG: mrd:Mrad2831_5739 ERF family protein YP_004126295.1 KEGG: dac:Daci_1917 hypothetical protein YP_004126296.1 KEGG: sml:Smlt2731 general secretion pathway protein H YP_004126297.1 KEGG: bta:505723 La ribonucleoprotein domain family, member 4B YP_004126298.1 KEGG: tgr:Tgr7_1656 hypothetical protein YP_004126299.1 KEGG: pag:PLES_07901 hypothetical protein YP_004126300.1 KEGG: vha:VIBHAR_02019 hypothetical protein YP_004126301.1 KEGG: vap:Vapar_6373 hypothetical protein YP_004126302.1 KEGG: tmz:Tmz1t_0111 hypothetical protein YP_004126303.1 KEGG: vap:Vapar_4558 nuclease (SNase domain protein); PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein) YP_004126304.1 PFAM: protein of unknown function DUF1555; KEGG: gsu:GSU1949 hypothetical protein YP_004126305.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: aav:Aave_1607 prophage repressor YP_004126306.1 KEGG: mbn:Mboo_1574 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004126307.1 KEGG: chl:Chy400_3663 secretion protein HlyD family protein YP_004126308.1 KEGG: pca:Pcar_1084 transposase and inactivated derivatives YP_004126310.1 KEGG: scb:SCAB_27931 neutral zinc metalloprotease YP_004126311.1 KEGG: ssn:SSON_1580 unknown prophage protein YP_004126312.1 PFAM: DnaB domain protein helicase domain protein; KEGG: bvi:Bcep1808_1163 DnaB domain-containing protein YP_004126313.1 KEGG: aav:Aave_1760 hypothetical protein YP_004126314.1 KEGG: sen:SACE_5054 mannitol dehydrogenase YP_004126315.1 PFAM: endodeoxyribonuclease RusA; KEGG: bav:BAV1307 phage endonuclease YP_004126316.1 KEGG: bpt:Bpet0967 hypothetical protein YP_004126317.1 KEGG: aav:Aave_1763 hypothetical protein YP_004126318.1 KEGG: aav:Aave_1697 hypothetical protein YP_004126319.1 KEGG: aav:Aave_2352 hypothetical protein YP_004126320.1 KEGG: aav:Aave_2353 terminase large subunit protein YP_004126321.1 KEGG: aav:Aave_1700 phage associated protein YP_004126322.1 KEGG: aav:Aave_1702 hypothetical protein YP_004126323.1 KEGG: ngk:NGK_0673 phage associated protein YP_004126324.1 KEGG: aav:Aave_1704 phage associated protein YP_004126325.1 KEGG: aav:Aave_1705 phage associated protein YP_004126326.1 KEGG: aav:Aave_1706 hypothetical protein YP_004126327.1 KEGG: aav:Aave_1716 hypothetical protein YP_004126328.1 KEGG: bpr:GBP346_A1728 hypothetical protein YP_004126329.1 KEGG: neu:NE1381 hypothetical protein YP_004126330.1 KEGG: hse:Hsero_1548 hypothetical protein YP_004126331.1 manually curated; KEGG: hse:Hsero_1549 hypothetical protein YP_004126332.1 KEGG: lpf:lpl0182 hypothetical protein YP_004126333.1 PFAM: SMF family protein; KEGG: amc:MADE_00299 smf protein YP_004126334.1 KEGG: ctt:CtCNB1_2656 hypothetical protein YP_004126335.1 KEGG: rer:RER_25240 hypothetical protein YP_004126336.1 KEGG: pag:PLES_13611 hypothetical protein YP_004126337.1 KEGG: olu:OSTLU_23918 predicted protein YP_004126338.1 KEGG: aav:Aave_1709 hypothetical protein YP_004126339.1 KEGG: gym:GYMC10_1290 transcriptional regulator, AraC family YP_004126340.1 KEGG: sml:Smlt1972 YP_004126341.1 KEGG: aav:Aave_1715 hypothetical protein YP_004126342.1 KEGG: aav:Aave_1722 hypothetical protein YP_004126343.1 KEGG: aav:Aave_1723 hypothetical protein YP_004126344.1 KEGG: aav:Aave_1724 hypothetical protein YP_004126345.1 KEGG: ent:Ent638_0148 hypothetical protein YP_004126346.1 KEGG: aav:Aave_1728 hypothetical protein YP_004126347.1 KEGG: bbr:BB3482 phage lysozyme YP_004126348.1 KEGG: pha:PSHAa0938 hypothetical protein YP_004126349.1 manually curated; KEGG: aav:Aave_2360 hypothetical protein YP_004126350.1 PFAM: Uncharacterised protein family UPF0150; KEGG: bpa:BPP2077 hypothetical protein YP_004126351.1 PFAM: YcfA family protein; KEGG: bpa:BPP2078 hypothetical protein YP_004126352.1 KEGG: dac:Daci_1655 hypothetical protein YP_004126353.1 KEGG: dac:Daci_1656 hypothetical protein YP_004126354.1 KEGG: vei:Veis_5041 hypothetical protein YP_004126355.1 KEGG: saq:Sare_4718 pantoate--beta-alanine ligase YP_004126356.1 PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3395 transposase, IS4 family protein YP_004126357.1 KEGG: mea:Mex_2p0814 hypothetical protein YP_004126358.1 KEGG: mpt:Mpe_A2996 transposase; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004126359.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_6160 integrase catalytic subunit YP_004126360.1 KEGG: mms:mma_3457 hypothetical protein YP_004126361.1 KEGG: lch:Lcho_3476 hypothetical protein YP_004126362.1 manually curated; KEGG: ajs:Ajs_3336 hypothetical protein YP_004126363.1 KEGG: lch:Lcho_3471 hypothetical protein YP_004126364.1 KEGG: ajs:Ajs_3340 phage integrase family protein; manually curated; PFAM: integrase family protein YP_004126365.1 KEGG: aav:Aave_2648 signal peptide protein YP_004126366.1 KEGG: dia:Dtpsy_1977 hypothetical protein YP_004126367.1 PFAM: Lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding lysin domain; KEGG: ajs:Ajs_1742 lytic transglycosylase, catalytic YP_004126368.1 TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: dia:Dtpsy_1975 hydroxyacylglutathione hydrolase YP_004126369.1 PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_1744 methyltransferase type 11 YP_004126370.1 PFAM: ribonuclease H; KEGG: dia:Dtpsy_1973 ribonuclease H YP_004126371.1 PFAM: aminotransferase class I and II; KEGG: rso:RSp1232 aspartate aminotransferase A protein YP_004126372.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: app:CAP2UW1_2989 dimethylmenaquinone methyltransferase YP_004126373.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: app:CAP2UW1_2990 dimethylmenaquinone methyltransferase YP_004126374.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS03179 transcription regulator protein YP_004126375.1 KEGG: aav:Aave_4073 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004126376.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsl:RPSI07_mp1263 dimethylmenaquinone methyltransferase; protein YP_004126377.1 KEGG: mms:mma_2446 tricarboxylate binding receptor YP_004126378.1 KEGG: dac:Daci_4475 hypothetical protein YP_004126379.1 PFAM: Thioredoxin domain-containing protein; KEGG: dia:Dtpsy_1972 thioredoxin domain protein YP_004126380.1 KEGG: dia:Dtpsy_1971 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV YP_004126381.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_2657 GCN5-related N-acetyltransferase YP_004126382.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: dia:Dtpsy_1970 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_004126383.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: dia:Dtpsy_1969 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004126384.1 KEGG: ajs:Ajs_1750 hypothetical protein YP_004126385.1 KEGG: ajs:Ajs_1755 hypothetical protein YP_004126386.1 PFAM: Aldehyde Dehydrogenase; KEGG: dia:Dtpsy_1966 aldehyde dehydrogenase YP_004126387.1 TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: dia:Dtpsy_1965 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase YP_004126388.1 KEGG: dia:Dtpsy_1964 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase YP_004126389.1 KEGG: ajs:Ajs_1759 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004126390.1 KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004126391.1 PFAM: protein of unknown function DUF482; KEGG: vei:Veis_1736 hypothetical protein YP_004126392.1 KEGG: vei:Veis_1737 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004126393.1 PFAM: nitrogen regulatory protein P-II; KEGG: dia:Dtpsy_1960 nitrogen regulatory protein P-II YP_004126394.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: dia:Dtpsy_1959 hypothetical protein YP_004126395.1 PFAM: diacylglycerol kinase; KEGG: dia:Dtpsy_1958 diacylglycerol kinase YP_004126396.1 PFAM: RDD domain containing protein; KEGG: ajs:Ajs_1765 RDD domain-containing protein YP_004126397.1 KEGG: ajs:Ajs_1766 transmembrane protein YP_004126398.1 KEGG: dia:Dtpsy_1955 transmembrane protein YP_004126399.1 KEGG: dia:Dtpsy_1954 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2 YP_004126400.1 KEGG: ajs:Ajs_1769 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004126401.1 KEGG: ctt:CtCNB1_1659 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004126402.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: dia:Dtpsy_1951 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase YP_004126403.1 KEGG: vei:Veis_1753 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004126404.1 KEGG: tmz:Tmz1t_0854 maleylacetoacetate isomerase; TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain YP_004126405.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: tmz:Tmz1t_0853 fumarylacetoacetate (FAA) hydrolase YP_004126406.1 PFAM: major facilitator superfamily MFS_1; KEGG: hse:Hsero_1116 4-hydroxybenzoate transporter transmembrane protein YP_004126407.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azo:azo3679 glyoxalase-family protein YP_004126408.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_3346 LysR family transcriptional regulator YP_004126409.1 TIGRFAM: 2-isopropylmalate synthase; KEGG: dia:Dtpsy_1949 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004126410.1 KEGG: ajs:Ajs_1774 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004126411.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: ajs:Ajs_1775 murein-dd-endopeptidase YP_004126412.1 KEGG: dia:Dtpsy_1946 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004126413.1 KEGG: dac:Daci_5942 sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004126414.1 KEGG: dac:Daci_5941 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase YP_004126415.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_1945 acyl-CoA dehydrogenase domain protein YP_004126416.1 PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_1778 aminoglycoside phosphotransferase YP_004126417.1 KEGG: ajs:Ajs_1779 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004126418.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dia:Dtpsy_1942 enoyl-CoA hydratase/isomerase YP_004126419.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_1941 3-hydroxy-acyl-CoA dehydrogenase YP_004126420.1 KEGG: dia:Dtpsy_1940 hypothetical protein YP_004126421.1 KEGG: dia:Dtpsy_1939 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_004126422.1 PFAM: thiazole biosynthesis family protein; KEGG: dia:Dtpsy_1938 thiazole synthase YP_004126423.1 KEGG: dia:Dtpsy_1937 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_004126424.1 KEGG: dia:Dtpsy_1936 FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase YP_004126425.1 KEGG: ajs:Ajs_1787 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004126426.1 KEGG: dia:Dtpsy_1934 SH3 type 3 domain protein; PFAM: SH3 type 3 domain protein; protein of unknown function DUF1058; SMART: SH3 domain protein YP_004126427.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: ctt:CtCNB1_2972 cytosine/purines/uracil permease YP_004126428.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dia:Dtpsy_1933 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004126429.1 KEGG: dia:Dtpsy_1932 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004126430.1 TIGRFAM: sulfate adenylyltransferase, large subunit; KEGG: dia:Dtpsy_1931 sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding YP_004126431.1 KEGG: aav:Aave_3055 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase YP_004126432.1 KEGG: ajs:Ajs_1793 phosphoadenylylsulfate reductase (thioredoxin); PFAM: phosphoadenosine phosphosulfate reductase YP_004126433.1 PFAM: Uncharacterised conserved protein UCP030820; KEGG: dia:Dtpsy_1928 hypothetical protein YP_004126434.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: dia:Dtpsy_1927 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004126435.1 PFAM: protein of unknown function DUF81; KEGG: aav:Aave_3052 hypothetical protein YP_004126436.1 KEGG: dac:Daci_4644 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752 YP_004126437.1 PFAM: Uncharacterised protein family UPF0126; KEGG: dia:Dtpsy_1925 protein of unknown function UPF0126 YP_004126438.1 PFAM: Fe(II) trafficking protein YggX; KEGG: ctt:CtCNB1_3078 Fe(II) trafficking protein YggX YP_004126439.1 KEGG: ajs:Ajs_1799 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004126440.1 KEGG: rfr:Rfer_1780 NADPH-dependent FMN reductase YP_004126441.1 KEGG: rme:Rmet_3794 TetR family transcriptional regulator YP_004126443.1 PFAM: AMP-dependent synthetase and ligase; KEGG: azl:AZL_a10790 long-chain fatty-acid-CoA ligase YP_004126444.1 KEGG: bxe:Bxe_B2740 lipid-transfer protein; PFAM: Thiolase-like YP_004126445.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_4328 short-chain dehydrogenase/reductase SDR YP_004126446.1 PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_C0498 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_004126447.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0499 branched chain amino acid ABC transporter inner membrane protein YP_004126448.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0500 branched chain amino acid ABC transporter inner membrane protein YP_004126449.1 KEGG: bxe:Bxe_C0501 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126450.1 KEGG: bxe:Bxe_C0502 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126451.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: pat:Patl_3926 carboxymuconolactone decarboxylase YP_004126452.1 PFAM: AMP-dependent synthetase and ligase; KEGG: tfu:Tfu_1300 DitJ-like CoA ligase YP_004126453.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ctt:CtCNB1_1711 short-chain dehydrogenase/reductase SDR YP_004126454.1 PFAM: Lytic transglycosylase catalytic; Sel1 domain protein repeat-containing protein; KEGG: rfr:Rfer_0483 lytic transglycosylase, catalytic YP_004126455.1 KEGG: ecc:c1165 P4 family integrase YP_004126456.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004126457.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004126458.1 KEGG: ajs:Ajs_2230 hypothetical protein YP_004126459.1 KEGG: ajs:Ajs_2229 hypothetical protein YP_004126460.1 KEGG: rpf:Rpic12D_0659 hypothetical protein YP_004126461.1 KEGG: ajs:Ajs_1298 mercuric reductase; TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004126462.1 KEGG: ajs:Ajs_1299 mercuric transport protein periplasmic component; TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein YP_004126463.1 PFAM: Mercuric transport protein MerT; KEGG: ajs:Ajs_1300 mercuric transport protein YP_004126464.1 TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: ajs:Ajs_1301 MerR family transcriptional regulator; SMART: regulatory protein MerR YP_004126465.1 KEGG: mpt:Mpe_A2362 hypothetical protein YP_004126466.1 KEGG: mpt:Mpe_A2363 hypothetical protein YP_004126467.1 KEGG: mpt:Mpe_A2364 hypothetical protein YP_004126468.1 KEGG: tmz:Tmz1t_0975 hypothetical protein YP_004126469.1 KEGG: tmz:Tmz1t_0974 hypothetical protein YP_004126470.1 KEGG: mpt:Mpe_A2367 hypothetical protein YP_004126471.1 KEGG: ajs:Ajs_2220 helicase domain-containing protein YP_004126472.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004126473.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004126474.1 PFAM: integrase family protein; KEGG: mpt:Mpe_A2408 integrase (int) YP_004126475.1 KEGG: ajs:Ajs_1664 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004126476.1 manually curated; KEGG: dia:Dtpsy_2039 hypothetical protein YP_004126477.1 KEGG: dia:Dtpsy_2037 hypothetical protein YP_004126478.1 KEGG: dia:Dtpsy_2036 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_004126479.1 manually curated; PFAM: CBS domain containing protein; HPP family protein; KEGG: ajs:Ajs_1669 CBS domain-containing protein; SMART: CBS domain containing protein YP_004126480.1 KEGG: dia:Dtpsy_2034 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004126481.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ajs:Ajs_4119 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004126482.1 PFAM: protein of unknown function DUF1624; KEGG: ajs:Ajs_1672 hypothetical protein YP_004126483.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: dia:Dtpsy_1390 integration host factor, beta subunit; SMART: histone family protein DNA-binding protein YP_004126484.1 KEGG: dia:Dtpsy_1391 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_004126485.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; cytidylate kinase; KEGG: dia:Dtpsy_1392 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); cytidylate kinase region YP_004126486.1 KEGG: dia:Dtpsy_1393 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_004126487.1 KEGG: dia:Dtpsy_1394 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein YP_004126488.1 TIGRFAM: phosphoserine aminotransferase; KEGG: dia:Dtpsy_1395 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_004126489.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: ajs:Ajs_2464 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004126490.1 PFAM: OmpA/MotB domain protein; KEGG: dia:Dtpsy_1397 OmpA/MotB domain protein YP_004126491.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: dia:Dtpsy_1398 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11 YP_004126492.1 KEGG: ajs:Ajs_2461 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004126493.1 PFAM: protein of unknown function DUF159; KEGG: tin:Tint_2914 protein of unknown function DUF159 YP_004126494.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: tin:Tint_2913 peptidase S24/S26A/S26B, conserved region YP_004126495.1 KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_004126496.1 KEGG: mca:MCA2632 hypothetical protein YP_004126497.1 KEGG: mca:MCA2633 prophage LambdaMc01, site-specific recombinase resolvase family protein, truncation YP_004126498.1 PFAM: Resolvase domain; Recombinase; KEGG: mca:MCA2634 prophage LambdaMc01, site-specific recombinase resolvase family protein YP_004126499.1 KEGG: mca:MCA2635 hypothetical protein YP_004126500.1 KEGG: mca:MCA2636 hypothetical protein YP_004126501.1 KEGG: sml:Smlt1898 HTH transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004126502.1 KEGG: nde:NIDE0076 hypothetical protein YP_004126503.1 KEGG: ara:Arad_14159 hydantoin utilization protein B; PFAM: Hydantoinase B/oxoprolinase YP_004126504.1 PFAM: transposase IS3/IS911 family protein; KEGG: rfr:Rfer_2709 transposase IS3/IS911 YP_004126505.1 PFAM: IS66 Orf2 family protein; KEGG: rfr:Rfer_2710 IS66 Orf2 like YP_004126506.1 KEGG: dia:Dtpsy_2523 transposase IS66 YP_004126507.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004126508.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004126509.1 manually curated; KEGG: pol:Bpro_4342 sarcosine oxidase alpha subunit YP_004126510.1 PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_4343 FAD dependent oxidoreductase YP_004126511.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_4348 LysR family transcriptional regulator YP_004126512.1 TIGRFAM: Glutaminase, core; KEGG: thermolabile glutaminase (glutaminase A); PFAM: Glutaminase, core YP_004126513.1 TIGRFAM: amidohydrolase; KEGG: pol:Bpro_4523 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004126514.1 KEGG: rme:Rmet_5758 major facilitator protein family permease YP_004126515.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4525 LysR family transcriptional regulator YP_004126516.1 KEGG: sde:Sde_2785 hypothetical protein YP_004126517.1 manually curated; KEGG: afr:AFE_1417 acetyltransferase, GNAT family YP_004126518.1 PFAM: protein of unknown function DUF1778; KEGG: afr:AFE_1418 hypothetical protein YP_004126519.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1692 major facilitator superfamily transporter YP_004126520.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_2008 gluconate 5-dehydrogenase YP_004126521.1 PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_1696 hypothetical protein YP_004126522.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: ajs:Ajs_1697 alcohol dehydrogenase YP_004126523.1 KEGG: ajs:Ajs_1699 glutathione S-transferase-related protein YP_004126524.1 KEGG: dia:Dtpsy_2002 protein of unknown function DUF1566 YP_004126525.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1703 major facilitator superfamily transporter YP_004126526.1 KEGG: ajs:Ajs_1801 deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_004126527.1 KEGG: ajs:Ajs_1629 hypothetical protein YP_004126528.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: ajs:Ajs_1630 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_004126529.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_1631 LysR family transcriptional regulator YP_004126530.1 KEGG: dac:Daci_3074 hypothetical protein YP_004126531.1 KEGG: dac:Daci_0667 hypothetical protein YP_004126532.1 PFAM: isocitrate lyase and phosphorylmutase; KEGG: dac:Daci_3579 PEP phosphonomutase YP_004126533.1 KEGG: dac:Daci_3586 AcnD-accessory protein PrpF; TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453 YP_004126534.1 KEGG: dia:Dtpsy_2080 aconitate hydratase; TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; PFAM: aconitate hydratase domain-containing protein YP_004126535.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: ajs:Ajs_1635 methylcitrate synthase; PFAM: Citrate synthase YP_004126536.1 KEGG: dia:Dtpsy_2078 thioesterase superfamily protein; manually curated; PFAM: thioesterase superfamily protein YP_004126537.1 KEGG: ajs:Ajs_1637 XRE family transcriptional regulator; PFAM: Protein of unknown function DUF2083,transcriptional regulator; protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004126538.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B2225 transcription regulator, LysR family YP_004126539.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cti:RALTA_B2224 metallothiol transferase YP_004126540.1 KEGG: hse:Hsero_2301 hypothetical protein YP_004126541.1 KEGG: ajs:Ajs_1639 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004126542.1 KEGG: dia:Dtpsy_2074 histidine kinase; PFAM: Two-component sensor kinase domain-containing protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004126543.1 KEGG: ajs:Ajs_1641 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004126544.1 KEGG: dia:Dtpsy_2072 hypothetical protein YP_004126545.1 KEGG: dia:Dtpsy_2071 hypothetical protein YP_004126546.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein YP_004126547.1 KEGG: dia:Dtpsy_2060 D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; PFAM: D-(-)-3-hydroxybutyrate oligomer hydrolase, putative YP_004126548.1 KEGG: ctt:CtCNB1_3704 lipoprotein YP_004126549.1 KEGG: dia:Dtpsy_2056 hypothetical protein YP_004126550.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ajs:Ajs_1649 protein of unknown function DUF395, YeeE/YedE YP_004126551.1 KEGG: dia:Dtpsy_2054 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004126552.1 TIGRFAM: ferrochelatase; KEGG: ajs:Ajs_1652 ferrochelatase; PFAM: ferrochelatase YP_004126553.1 KEGG: dac:Daci_2563 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004126554.1 KEGG: dia:Dtpsy_2050 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004126555.1 PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_1655 alpha/beta hydrolase fold YP_004126556.1 KEGG: ajs:Ajs_1656 O-acetylhomoserine aminocarboxypropyltransferase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004126557.1 KEGG: dia:Dtpsy_2047 CBS domain containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004126558.1 TIGRFAM: chorismate synthase; KEGG: dia:Dtpsy_2046 chorismate synthase; PFAM: chorismate synthase YP_004126559.1 PFAM: ATP-cone domain protein; KEGG: dia:Dtpsy_2045 transcriptional regulator NrdR YP_004126560.1 KEGG: dia:Dtpsy_2044 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004126561.1 PFAM: Lytic transglycosylase catalytic; KEGG: dia:Dtpsy_2043 lytic transglycosylase catalytic YP_004126562.1 KEGG: ajs:Ajs_1662 hypothetical protein YP_004126563.1 KEGG: dia:Dtpsy_2041 hypothetical protein YP_004126564.1 SMART: Cold shock protein; manually curated; KEGG: dia:Dtpsy_1240 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_004126565.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_1241 short-chain dehydrogenase/reductase SDR YP_004126566.1 KEGG: aav:Aave_3388 cytochrome c553-like protein YP_004126567.1 KEGG: aav:Aave_3387 cytochrome c, class I; PFAM: cytochrome c class I YP_004126568.1 PFAM: Thioredoxin domain-containing protein; KEGG: dia:Dtpsy_1244 hypothetical protein YP_004126569.1 PFAM: protein of unknown function DUF150; KEGG: dia:Dtpsy_1245 hypothetical protein YP_004126570.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; KEGG: dia:Dtpsy_1246 NusA antitermination factor; SMART: KH domain protein YP_004126571.1 KEGG: dia:Dtpsy_1247 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein ; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein YP_004126572.1 KEGG: aav:Aave_3382 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004126573.1 KEGG: ajs:Ajs_2559 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_004126574.1 KEGG: ajs:Ajs_2558 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004126575.1 KEGG: vap:Vapar_3272 hypothetical protein YP_004126576.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_2556 3-hydroxyisobutyryl-CoA hydrolase YP_004126577.1 KEGG: ajs:Ajs_2555 transmembrane anti-sigma factor YP_004126578.1 KEGG: dia:Dtpsy_1254 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004126579.1 KEGG: dia:Dtpsy_1255 secreted repeat of unknown function YP_004126580.1 KEGG: dia:Dtpsy_1256 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_004126581.1 PFAM: cyclase/dehydrase; KEGG: dia:Dtpsy_1257 cyclase/dehydrase YP_004126582.1 PFAM: protein of unknown function UPF0125; KEGG: ajs:Ajs_2550 hypothetical protein YP_004126583.1 KEGG: ajs:Ajs_2549 hypothetical protein YP_004126584.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: dia:Dtpsy_1260 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_004126585.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; KEGG: dac:Daci_3013 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_004126586.1 PFAM: integrase family protein; KEGG: bam:Bamb_2021 phage integrase family protein YP_004126587.1 KEGG: dia:Dtpsy_2288 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_004126588.1 PFAM: protein of unknown function DUF339; KEGG: ajs:Ajs_2797 hypothetical protein YP_004126589.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: dac:Daci_2424 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin YP_004126590.1 KEGG: dia:Dtpsy_2285 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004126591.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: aav:Aave_2203 succinate dehydrogenase subunit D YP_004126592.1 KEGG: dia:Dtpsy_2283 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_004126593.1 KEGG: dia:Dtpsy_2282 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004126594.1 KEGG: dia:Dtpsy_2281 malate dehydrogenase; TIGRFAM: malate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_004126595.1 KEGG: dac:Daci_2430 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 12 YP_004126596.1 KEGG: dia:Dtpsy_2278 hypothetical protein YP_004126597.1 KEGG: ajs:Ajs_2787 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B; aconitate hydratase domain-containing protein YP_004126598.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctt:CtCNB1_3364 transcriptional regulator, LysR family YP_004126599.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ctt:CtCNB1_3363 acyl-CoA dehydrogenase-like protein YP_004126600.1 KEGG: ctt:CtCNB1_3361 AccB YP_004126601.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ctt:CtCNB1_3358 L-carnitine dehydratase/bile acid-inducible YP_004126602.1 KEGG: dac:Daci_2356 glutathione-disulfide reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004126603.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: vei:Veis_4544 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_004126604.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: vap:Vapar_1594 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_004126605.1 KEGG: pol:Bpro_0576 molybdopterin dehydrogenase, FAD-binding; PFAM: molybdopterin dehydrogenase FAD-binding YP_004126606.1 KEGG: dac:Daci_2251 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_004126607.1 PFAM: VWA containing CoxE family protein; KEGG: vei:Veis_4536 VWA containing CoxE family protein YP_004126608.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: pol:Bpro_0573 carbon monoxide dehydrogenase subunit G YP_004126609.1 PFAM: protein of unknown function DUF182; KEGG: pol:Bpro_0572 hypothetical protein YP_004126610.1 KEGG: aeh:Mlg_1568 molybdenum cofactor cytidylyltransferase YP_004126611.1 KEGG: dia:Dtpsy_2274 hypothetical protein YP_004126612.1 KEGG: gox:GOX2135 hypothetical protein YP_004126613.1 PFAM: amine oxidase; KEGG: xal:XALc_2703 probable protoporphyrinogen oxidase protein YP_004126614.1 manually curated; KEGG: reh:H16_A2892 hypothetical protein YP_004126615.1 KEGG: cph:Cpha266_0350 glycosyl transferase family protein; manually curated; PFAM: glycosyl transferase family 2 YP_004126616.1 PFAM: peptidase U32; KEGG: dia:Dtpsy_2273 peptidase U32 YP_004126617.1 KEGG: dac:Daci_1894 hypothetical protein YP_004126618.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_2444 LysR family transcriptional regulator YP_004126619.1 PFAM: protein of unknown function DUF81; KEGG: pol:Bpro_2443 hypothetical protein YP_004126620.1 KEGG: dia:Dtpsy_2271 two component transcriptional regulator, fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver YP_004126621.1 KEGG: ajs:Ajs_2780 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004126622.1 PFAM: Surfeit locus 1 family protein; KEGG: ajs:Ajs_2779 surfeit locus 1 family protein YP_004126623.1 KEGG: ajs:Ajs_2778 cytochrome c oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_004126624.1 KEGG: dia:Dtpsy_2267 cytochrome o ubiquinol oxidase, subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III YP_004126625.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: ajs:Ajs_2776 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I YP_004126626.1 KEGG: ajs:Ajs_2775 ubiquinol oxidase, subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II YP_004126627.1 KEGG: ajs:Ajs_2774 general substrate transporter YP_004126628.1 KEGG: dia:Dtpsy_2263 protein TolA; TIGRFAM: protein TolA; TonB family protein; PFAM: Tol-Pal system TolA YP_004126629.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2772 biopolymer transport protein ExbD/TolR YP_004126630.1 KEGG: dia:Dtpsy_2261 protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_004126631.1 KEGG: dia:Dtpsy_2260 tol-pal system-associated acyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein YP_004126632.1 PFAM: aminotransferase class I and II; KEGG: dia:Dtpsy_2259 aminotransferase YP_004126633.1 KEGG: dia:Dtpsy_2258 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_004126634.1 KEGG: ajs:Ajs_2767 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_004126635.1 KEGG: dia:Dtpsy_2256 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_004126636.1 PFAM: ferredoxin; KEGG: dia:Dtpsy_2255 ferredoxin YP_004126637.1 PFAM: NUDIX hydrolase; KEGG: pna:Pnap_2699 NUDIX hydrolase YP_004126638.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_2522 short-chain dehydrogenase/reductase SDR YP_004126639.1 TIGRFAM: glutamate/cysteine ligase; KEGG: dia:Dtpsy_1339 glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase YP_004126640.1 KEGG: vap:Vapar_3567 protein of unknown function DUF893 YccS/YhfK YP_004126641.1 KEGG: aav:Aave_2269 hypothetical protein YP_004126642.1 PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_4413 endoribonuclease L-PSP YP_004126643.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_4414 BFD-like (2Fe-2S)-binding region YP_004126644.1 KEGG: pol:Bpro_4415 hypothetical protein YP_004126645.1 KEGG: pol:Bpro_4416 FAD dependent oxidoreductase; manually curated; PFAM: FAD dependent oxidoreductase YP_004126646.1 KEGG: dac:Daci_0779 hypothetical protein YP_004126647.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_4347 LysR family transcriptional regulator YP_004126648.1 KEGG: ajs:Ajs_2510 GTP-binding protein, HSR1-related; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related YP_004126649.1 KEGG: dia:Dtpsy_1352 hypothetical protein YP_004126650.1 KEGG: dia:Dtpsy_1355 pseudouridine synthase; manually curated; PFAM: pseudouridine synthase YP_004126651.1 KEGG: dia:Dtpsy_1356 hypothetical protein YP_004126652.1 PFAM: phosphoesterase DHHA1; KEGG: ajs:Ajs_2502 phosphoesterase, DHHA1 YP_004126653.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2285 major facilitator superfamily transporter YP_004126654.1 KEGG: ajs:Ajs_2501 nuclease; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein) YP_004126655.1 TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: dia:Dtpsy_1360 RarD protein, DMT superfamily transporter YP_004126656.1 PFAM: pseudouridine synthase; KEGG: dia:Dtpsy_1363 pseudouridine synthase YP_004126657.1 PFAM: Peptidase M23; KEGG: ajs:Ajs_2496 peptidase M23B YP_004126658.1 PFAM: fumarate lyase; Fumarase C-like; KEGG: dia:Dtpsy_1365 fumarate lyase YP_004126659.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: dac:Daci_2483 protein of unknown function DUF306 MetA and HslJ YP_004126660.1 PFAM: protein of unknown function DUF924; KEGG: dia:Dtpsy_3311 protein of unknown function DUF924 YP_004126661.1 KEGG: ajs:Ajs_1608 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_004126662.1 KEGG: dia:Dtpsy_2105 hypothetical protein YP_004126663.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: ajs:Ajs_1610 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_004126664.1 PFAM: alpha/beta hydrolase fold; KEGG: dia:Dtpsy_2103 alpha/beta hydrolase fold protein YP_004126665.1 PFAM: Class I peptide chain release factor; KEGG: dia:Dtpsy_2102 class I peptide chain release factor YP_004126666.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ajs:Ajs_1613 extradiol ring-cleavage dioxygenase III subunit B YP_004126667.1 PFAM: phospholipase/Carboxylesterase; KEGG: vei:Veis_2297 phospholipase/carboxylesterase YP_004126668.1 KEGG: ajs:Ajs_1615 hypothetical protein YP_004126669.1 KEGG: ajs:Ajs_1616 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004126670.1 KEGG: ajs:Ajs_1617 2-oxoacid dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; alpha-ketoglutarate dehydrogenase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_004126671.1 PFAM: Amidase; KEGG: bpt:Bpet0082 amidase YP_004126672.1 manually curated; KEGG: aav:Aave_3937 hypothetical protein YP_004126673.1 PFAM: Mor transcription activator domain protein; KEGG: bbr:BB3657 phage-related DNA-binding protein YP_004126674.1 KEGG: cvi:CV_2164 hypothetical protein YP_004126675.1 KEGG: aav:Aave_1666 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004126676.1 KEGG: aav:Aave_4127 hypothetical protein YP_004126677.1 KEGG: pol:Bpro_3763 hypothetical protein YP_004126678.1 KEGG: pna:Pnap_3330 hypothetical protein YP_004126679.1 KEGG: gla:GL50803_88750 hypothetical protein YP_004126681.1 KEGG: pol:Bpro_3759 hypothetical protein YP_004126682.1 KEGG: bqu:BQ10670 hypothetical protein YP_004126683.1 KEGG: lch:Lcho_2277 hypothetical protein YP_004126684.1 KEGG: glo:Glov_0377 hypothetical protein YP_004126686.1 KEGG: sgl:SG0822 hypothetical protein YP_004126687.1 PFAM: Integrase catalytic region; KEGG: cvi:CV_2156 hypothetical protein YP_004126688.1 KEGG: cvi:CV_2155 hypothetical protein YP_004126689.1 PFAM: regulatory protein IclR; KEGG: mfa:Mfla_2714 hypothetical protein YP_004126690.1 KEGG: bps:BPSL1153 hypothetical protein YP_004126691.1 KEGG: bbr:BB3644 hypothetical protein YP_004126692.1 KEGG: bbt:BBta_4603 polysaccharide deacetylase YP_004126693.1 KEGG: gau:GAU_1846 hypothetical protein YP_004126694.1 KEGG: bbr:BB3643 hypothetical protein YP_004126695.1 KEGG: bcj:BCAL1594 hypothetical protein YP_004126696.1 PFAM: CI repressor; KEGG: hsm:HSM_0646 hypothetical protein YP_004126697.1 KEGG: nvi:100122395 similar to n6-adenosine-methyltransferase ime4 YP_004126698.1 KEGG: sml:Smlt0146 TPR repeat protein YP_004126699.1 KEGG: rsc:RCFBP_11706 phage-related membrane protein YP_004126700.1 PFAM: Lytic transglycosylase catalytic; KEGG: dvm:DvMF_0723 lytic transglycosylase catalytic YP_004126701.1 KEGG: bcb:BCB4264_A3495 hypothetical protein YP_004126702.1 KEGG: ctt:CtCNB1_3551 hypothetical protein YP_004126703.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: pol:Bpro_3778 TraR/DksA family transcriptional regulator YP_004126704.1 KEGG: bbr:BB3635 hypothetical protein YP_004126705.1 KEGG: bbr:BB3634 hypothetical protein YP_004126706.1 KEGG: bbr:BB3633 hypothetical protein YP_004126707.1 KEGG: pap:PSPA7_2455 formate/nitrate transporter YP_004126708.1 KEGG: mca:MCA2933 prophage MuMc02, terminase, ATPase subunit, putative YP_004126709.1 PFAM: protein of unknown function DUF935; KEGG: slt:Slit_0224 protein of unknown function DUF935 YP_004126710.1 PFAM: head morphogenesis protein SPP1 gp7; KEGG: hdu:HD1557 bacteriophage Mu GP30-like protein YP_004126711.1 TIGRFAM: phage virion morphogenesis protein; KEGG: hdu:HD1558 bacteriophage Mu G-like protein YP_004126712.1 PFAM: Mu-like prophage I protein; KEGG: pag:PLES_15791 protease (I) and scaffold (Z) proteins YP_004126713.1 KEGG: mag:amb1767 hypothetical protein YP_004126714.1 KEGG: mag:amb1768 Mu-like prophage major head subunit gpT YP_004126715.1 KEGG: mag:amb1769 hypothetical protein YP_004126716.1 PFAM: protein of unknown function DUF1320; KEGG: hdu:HD1562 hypothetical protein YP_004126717.1 KEGG: hma:rrnAC2056 D-3-phosphoglycerate dehydrogenase YP_004126718.1 KEGG: fre:Franean1_4038 inner-membrane translocator YP_004126719.1 KEGG: dac:Daci_1328 hypothetical protein YP_004126720.1 KEGG: sco:SCO4763 hypothetical protein YP_004126721.1 PFAM: protein of unknown function DUF1799 phage-related; KEGG: mfa:Mfla_2690 hypothetical protein YP_004126722.1 PFAM: Prophage tail length tape measure; KEGG: pop:POPTR_595161 hypothetical protein YP_004126723.1 KEGG: aav:Aave_1783 carbohydrate-binding family V/XII protein YP_004126724.1 KEGG: dac:Daci_1333 hypothetical protein YP_004126725.1 KEGG: wsu:WS1759 flagellar hook protein FlgE YP_004126726.1 KEGG: dac:Daci_2627 hypothetical protein YP_004126727.1 KEGG: scl:sce7319 hypothetical protein YP_004126728.1 KEGG: rru:Rru_A2371 hydroxyacylglutathione hydrolase YP_004126729.1 KEGG: rsl:RPSI07_0238 hypothetical protein YP_004126730.1 KEGG: sil:SPO2726 hypothetical protein YP_004126731.1 KEGG: ajs:Ajs_3918 transposase, IS4 family protein; manually curated; PFAM: transposase IS4 family protein YP_004126732.1 KEGG: mno:Mnod_2441 hypothetical protein YP_004126733.1 KEGG: vap:Vapar_5547 hypothetical protein YP_004126734.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: hmg:100212933 similar to lysR transcriptional regulator YP_004126735.1 KEGG: vap:Vapar_5148 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004126736.1 PFAM: major facilitator superfamily MFS_1; KEGG: vap:Vapar_5147 major facilitator superfamily MFS_1 YP_004126737.1 KEGG: vap:Vapar_5146 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004126738.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: vap:Vapar_5145 NAD-dependent epimerase/dehydratase YP_004126739.1 PFAM: type III effector Hrp-dependent outers; KEGG: vap:Vapar_5144 type III effector Hrp-dependent outers YP_004126740.1 PFAM: class II aldolase/adducin family protein; KEGG: vap:Vapar_5143 aldolase YP_004126741.1 KEGG: pol:Bpro_4876 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004126742.1 PFAM: protein of unknown function DUF980; KEGG: ajs:Ajs_1618 hypothetical protein YP_004126743.1 PFAM: metallophosphoesterase; KEGG: dia:Dtpsy_2095 UDP-2,3-diacylglucosamine hydrolase YP_004126744.1 KEGG: dia:Dtpsy_2094 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004126745.1 KEGG: dia:Dtpsy_2093 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004126746.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG YP_004126747.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: aav:Aave_2319 TPR repeat-containing protein YP_004126748.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: ajs:Ajs_1623 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_004126749.1 SMART: HhH-GPD family protein; manually curated; KEGG: dia:Dtpsy_2090 HhH-GPD family protein; PFAM: HhH-GPD family protein YP_004126750.1 KEGG: ajs:Ajs_1625 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_004126751.1 KEGG: ajs:Ajs_1627 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase YP_004126752.1 KEGG: aav:Aave_2324 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_004126753.1 PFAM: Cl- channel voltage-gated family protein; KEGG: aav:Aave_4712 Cl-channel, voltage-gated family protein YP_004126754.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004126755.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004126756.1 KEGG: dia:Dtpsy_1685 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004126757.1 PFAM: protein of unknown function DUF214; KEGG: dia:Dtpsy_1686 protein of unknown function DUF214 YP_004126758.1 KEGG: ajs:Ajs_1836 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126759.1 KEGG: ajs:Ajs_1837 lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein YP_004126760.1 PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: ajs:Ajs_1838 exonuclease I; SMART: Exonuclease YP_004126761.1 PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_1839 silent information regulator protein Sir2 YP_004126762.1 KEGG: dia:Dtpsy_1696 phytochrome sensor protein; PFAM: protein of unknown function UPF0118; GAF domain protein; SMART: GAF domain protein YP_004126763.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_3219 GCN5-related N-acetyltransferase YP_004126764.1 KEGG: dia:Dtpsy_1697 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004126765.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dia:Dtpsy_1698 pyridoxal-5'-phosphate-dependent protein beta subunit YP_004126766.1 PFAM: protein of unknown function DUF28; KEGG: dia:Dtpsy_1700 hypothetical protein YP_004126767.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG YP_004126768.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: ara:Arad_12230 cytochrome bd-type quinol oxidase subunit 1 YP_004126769.1 KEGG: msl:Msil_2643 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004126770.1 PFAM: Protein of unknown function DUF2474; KEGG: ara:Arad_12232 hypothetical protein YP_004126771.1 PFAM: LrgB family protein; KEGG: dia:Dtpsy_2405 LrgB family protein YP_004126772.1 PFAM: LrgA family protein; KEGG: ctt:CtCNB1_3605 LrgA YP_004126773.1 KEGG: mpt:Mpe_A0752 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004126774.1 PFAM: Glutathione S-transferase domain; KEGG: dia:Dtpsy_1701 glutathione S-transferase domain protein YP_004126775.1 PFAM: protein of unknown function DUF853 NPT hydrolase; KEGG: dia:Dtpsy_1702 protein of unknown function DUF853 NPT hydrolase putative YP_004126776.1 PFAM: protein of unknown function DUF28; KEGG: dia:Dtpsy_1703 hypothetical protein YP_004126777.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: ajs:Ajs_1899 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_004126778.1 KEGG: dia:Dtpsy_1705 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_004126779.1 KEGG: dia:Dtpsy_1706 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_004126780.1 PFAM: protein of unknown function DUF163; KEGG: aav:Aave_3199 rRNA large subunit methyltransferase YP_004126781.1 KEGG: dia:Dtpsy_1708 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004126782.1 KEGG: dia:Dtpsy_1709 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004126783.1 KEGG: dia:Dtpsy_1710 cytochrome d1 heme region; PFAM: cytochrome c class I YP_004126784.1 PFAM: Radical SAM domain protein; KEGG: dia:Dtpsy_1711 radical SAM domain protein YP_004126785.1 KEGG: ajs:Ajs_1907 AsnC family transcriptional regulator YP_004126786.1 KEGG: dia:Dtpsy_1714 transcriptional regulator, AsnC family YP_004126787.1 KEGG: ajs:Ajs_1910 cytochrome d1, heme region YP_004126788.1 KEGG: dia:Dtpsy_1716 hypothetical protein YP_004126789.1 KEGG: dia:Dtpsy_1717 hydroxylamine reductase YP_004126790.1 KEGG: dia:Dtpsy_1718 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004126791.1 KEGG: ajs:Ajs_1914 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004126792.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pca:Pcar_0095 sensory transduction system, regulatory protein; SMART: GGDEF domain containing protein YP_004126793.1 PFAM: aminotransferase class I and II; KEGG: dia:Dtpsy_1720 aminotransferase YP_004126794.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_1721 transcriptional regulator CysB-like protein YP_004126795.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: dia:Dtpsy_1722 cobalamin (vitamin B12) biosynthesis CbiX protein YP_004126796.1 PFAM: permease YjgP/YjgQ family protein; KEGG: dia:Dtpsy_1723 permease YjgP/YjgQ family protein YP_004126797.1 KEGG: dia:Dtpsy_1724 permease YjgP/YjgQ family protein; manually curated; PFAM: permease YjgP/YjgQ family protein YP_004126798.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: ajs:Ajs_1921 PepA aminopeptidase YP_004126799.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: ajs:Ajs_1922 DNA polymerase III chi subunit, HolC YP_004126800.1 KEGG: dia:Dtpsy_1727 hypothetical protein YP_004126801.1 PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_1925 extracellular ligand-binding receptor YP_004126802.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ajs:Ajs_1926 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004126803.1 KEGG: bmd:BMD_3062 N-acetylmuramoyl-L-alanine amidase YP_004126804.1 manually curated; KEGG: ajs:Ajs_1927 hypothetical protein YP_004126805.1 KEGG: dia:Dtpsy_1731 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2257 YP_004126806.1 PFAM: UspA domain-containing protein; KEGG: dia:Dtpsy_1732 UspA domain protein YP_004126807.1 KEGG: dac:Daci_4355 hypothetical protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein YP_004126808.1 KEGG: ajs:Ajs_1930 hypothetical protein YP_004126809.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: dia:Dtpsy_1734 beta-ketothiolase; PFAM: Thiolase-like YP_004126810.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_1735 short-chain dehydrogenase/reductase SDR YP_004126811.1 PFAM: pseudouridine synthase; KEGG: ajs:Ajs_1933 ribosomal large subunit pseudouridine synthase A YP_004126812.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; KEGG: dia:Dtpsy_1737 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver YP_004126813.1 KEGG: dia:Dtpsy_1738 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type YP_004126814.1 KEGG: dia:Dtpsy_1772 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_004126815.1 KEGG: dia:Dtpsy_1773 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004126816.1 KEGG: dia:Dtpsy_1406 hypothetical protein YP_004126817.1 PFAM: Redoxin domain protein; KEGG: ajs:Ajs_2433 redoxin domain-containing protein YP_004126818.1 KEGG: dia:Dtpsy_1426 2',5' RNA ligase YP_004126819.1 KEGG: ajs:Ajs_2417 hypothetical protein YP_004126820.1 KEGG: dia:Dtpsy_1431 hypothetical protein YP_004126821.1 KEGG: dia:Dtpsy_1432 transmembrane anti-sigma factor YP_004126822.1 KEGG: dia:Dtpsy_1433 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004126823.1 KEGG: dia:Dtpsy_1434 hypothetical protein YP_004126824.1 KEGG: dia:Dtpsy_1435 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase YP_004126825.1 TIGRFAM: D-serine ammonia-lyase; KEGG: ajs:Ajs_2250 D-serine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004126826.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: ajs:Ajs_2244 hypothetical protein YP_004126827.1 KEGG: har:HEAR1365 azurin precursor; TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein YP_004126828.1 KEGG: dia:Dtpsy_1631 radical SAM domain protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004126829.1 KEGG: ajs:Ajs_2151 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II YP_004126830.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: dia:Dtpsy_1636 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_004126831.1 KEGG: dia:Dtpsy_1637 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004126832.1 TIGRFAM: cysteine desulfurase IscS; KEGG: dia:Dtpsy_1638 cysteine desulfurase IscS; PFAM: aminotransferase class V YP_004126833.1 KEGG: dia:Dtpsy_1639 FeS cluster assembly scaffold IscU; TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein YP_004126834.1 KEGG: dia:Dtpsy_1640 iron-sulfur cluster assembly protein IscA; TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004126835.1 TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; KEGG: dia:Dtpsy_1641 co-chaperone Hsc20; SMART: heat shock protein DnaJ domain protein YP_004126836.1 KEGG: dia:Dtpsy_1642 chaperone protein HscA; TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70 YP_004126837.1 KEGG: dia:Dtpsy_1643 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin YP_004126838.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: ajs:Ajs_2138 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III YP_004126839.1 PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2136 FAD dependent oxidoreductase YP_004126840.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB YP_004126841.1 KEGG: dia:Dtpsy_1648 hypothetical protein YP_004126842.1 KEGG: ajs:Ajs_2133 hypothetical protein YP_004126843.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: ajs:Ajs_2132 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase YP_004126844.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: ajs:Ajs_2131 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase YP_004126845.1 PFAM: glutaredoxin; KEGG: dia:Dtpsy_1652 glutaredoxin YP_004126846.1 KEGG: ajs:Ajs_2129 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004126847.1 KEGG: dac:Daci_3983 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004126848.1 KEGG: ctt:CtCNB1_2245 two component transcriptional regulator, LuxR; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004126849.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: dia:Dtpsy_1656 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_004126850.1 KEGG: dia:Dtpsy_1657 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein YP_004126851.1 KEGG: dia:Dtpsy_1658 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004126852.1 KEGG: dia:Dtpsy_1659 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; biotin/lipoyl attachment domain-containing protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004126853.1 KEGG: lth:KLTH0B01034g KLTH0B01034p YP_004126854.1 KEGG: mgr:MGG_07539 hypothetical protein YP_004126855.1 KEGG: aav:Aave_2466 hypothetical protein YP_004126856.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: pna:Pnap_3558 filamentation induced by cAMP protein Fic YP_004126857.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rfr:Rfer_0879 LysR family transcriptional regulator YP_004126858.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: cai:Caci_5818 dimethylmenaquinone methyltransferase YP_004126859.1 PFAM: MmgE/PrpD family protein; KEGG: rsh:Rsph17029_3583 MmgE/PrpD family protein YP_004126860.1 KEGG: reu:Reut_B3949 hypothetical protein YP_004126861.1 KEGG: dia:Dtpsy_1661 hypothetical protein YP_004126862.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ajs:Ajs_2093 6-phosphogluconate dehydrogenase, NAD-binding YP_004126863.1 KEGG: rpc:RPC_0065 OmpA/MotB YP_004126864.1 PFAM: protein of unknown function DUF55; KEGG: aav:Aave_2834 hypothetical protein YP_004126865.1 PFAM: Transglycosylase-associated protein; KEGG: aav:Aave_2831 transglycosylase-associated protein YP_004126866.1 KEGG: ajs:Ajs_2091 NLP/P60 protein; manually curated; PFAM: NLP/P60 protein YP_004126867.1 PFAM: amino acid permease-associated region; KEGG: dac:Daci_3739 D-alanine/D-serine/glycine permease YP_004126869.1 KEGG: dia:Dtpsy_1665 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004126870.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE domain protein; PAS fold domain protein; KEGG: dia:Dtpsy_1667 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004126871.1 PFAM: protein of unknown function UPF0060; KEGG: ajs:Ajs_2087 hypothetical protein YP_004126872.1 PFAM: protein of unknown function DUF1555; KEGG: nar:Saro_2119 hypothetical protein YP_004126873.1 KEGG: dia:Dtpsy_1669 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein YP_004126874.1 SMART: ZipA FtsZ-binding region protein; KEGG: dia:Dtpsy_1670 ZipA FtsZ-binding region YP_004126875.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: ajs:Ajs_2083 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein YP_004126876.1 PFAM: Patatin; KEGG: ajs:Ajs_2082 patatin YP_004126877.1 KEGG: ajs:Ajs_2081 glycosyl transferase family protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004126878.1 PFAM: major facilitator superfamily MFS_1; KEGG: dia:Dtpsy_1675 major facilitator superfamily MFS_1 YP_004126879.1 PFAM: NUDIX hydrolase; KEGG: dia:Dtpsy_1676 NUDIX hydrolase YP_004126880.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: dia:Dtpsy_1677 fumarylacetoacetate (FAA) hydrolase YP_004126881.1 KEGG: dia:Dtpsy_1678 maleylacetoacetate isomerase; TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain YP_004126882.1 PFAM: protein of unknown function DUF152; KEGG: dia:Dtpsy_1679 protein of unknown function DUF152 YP_004126883.1 KEGG: dia:Dtpsy_1680 hypothetical protein YP_004126884.1 KEGG: dia:Dtpsy_1681 poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold YP_004126885.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ajs:Ajs_2073 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004126886.1 KEGG: ajs:Ajs_2072 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004126887.1 KEGG: ajs:Ajs_2071 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126888.1 KEGG: dac:Daci_3609 hypothetical protein YP_004126889.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dac:Daci_3610 acyl-CoA dehydrogenase domain-containing protein YP_004126890.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dac:Daci_3611 AMP-dependent synthetase and ligase YP_004126891.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_3612 LysR family transcriptional regulator YP_004126892.1 KEGG: ajs:Ajs_2070 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004126893.1 KEGG: ajs:Ajs_2069 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004126894.1 KEGG: dia:Dtpsy_1891 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E YP_004126895.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: dia:Dtpsy_1890 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004126896.1 KEGG: dia:Dtpsy_1889 succinyldiaminopimelate transaminase; TIGRFAM: succinyldiaminopimelate transaminase; PFAM: aminotransferase class I and II YP_004126897.1 KEGG: dia:Dtpsy_1887 electron transport complex, RnfABCDGE type, B subunit; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein YP_004126898.1 KEGG: ajs:Ajs_2063 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_004126899.1 PFAM: RelA/SpoT domain protein; KEGG: dia:Dtpsy_1885 RelA/SpoT domain protein YP_004126900.1 KEGG: dia:Dtpsy_1883 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS YP_004126901.1 PFAM: MaoC domain protein dehydratase; KEGG: pde:Pden_4680 dehydratase YP_004126902.1 PFAM: regulatory protein TetR; KEGG: pde:Pden_4681 TetR family transcriptional regulator YP_004126903.1 PFAM: Saccharopine dehydrogenase; KEGG: dia:Dtpsy_1846 saccharopine dehydrogenase YP_004126904.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dia:Dtpsy_1847 AMP-dependent synthetase and ligase YP_004126905.1 KEGG: dia:Dtpsy_1848 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004126906.1 PFAM: pyruvate carboxyltransferase; KEGG: sno:Snov_3532 pyruvate carboxyltransferase YP_004126907.1 KEGG: aav:Aave_3152 hypothetical protein YP_004126908.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: hne:HNE_1079 L-carnitine dehydratase YP_004126909.1 KEGG: rpt:Rpal_2644 transcriptional regulator, XRE family; PFAM: Protein of unknown function DUF2083,transcriptional regulator; protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004126910.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: dia:Dtpsy_1849 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_004126911.1 KEGG: dia:Dtpsy_1850 arginine/ornithine transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein YP_004126912.1 PFAM: carboxyl transferase; KEGG: ajs:Ajs_2042 carboxyl transferase YP_004126913.1 KEGG: dia:Dtpsy_1853 carbamoyl-phosphate synthase L chain ATP-binding; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein YP_004126914.1 KEGG: dia:Dtpsy_1854 lactoylglutathione lyase YP_004126915.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: ajs:Ajs_2045 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004126916.1 KEGG: pol:Bpro_1449 twin-arginine translocation pathway signal YP_004126917.1 KEGG: pol:Bpro_1450 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004126918.1 KEGG: pol:Bpro_1451 histidine kinase; PFAM: Two-component sensor kinase domain-containing protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004126919.1 KEGG: pol:Bpro_1452 hypothetical protein YP_004126920.1 PFAM: OsmC family protein; KEGG: pna:Pnap_2833 OsmC family protein YP_004126921.1 KEGG: pna:Pnap_2832 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004126922.1 KEGG: pna:Pnap_2829 hypothetical protein YP_004126923.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: alv:Alvin_1195 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004126924.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_2831 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004126925.1 PFAM: outer membrane efflux protein; KEGG: pna:Pnap_2830 TolC family type I secretion outer membrane protein YP_004126926.1 PFAM: acriflavin resistance protein; KEGG: pna:Pnap_2828 acriflavin resistance protein YP_004126927.1 KEGG: pna:Pnap_2827 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004126928.1 KEGG: pna:Pnap_2826 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004126929.1 PFAM: HpcH/HpaI aldolase; KEGG: tjr:TherJR_2256 2-dehydro-3-deoxyglucarate aldolase YP_004126930.1 KEGG: rpa:RPA2008 hypothetical protein YP_004126931.1 KEGG: cti:RALTA_B0210 conserved hypothetical protein; periplasmic receptor protein, UPF0065 YP_004126932.1 KEGG: bpt:Bpet3225 secreted protein YP_004126933.1 KEGG: bxe:Bxe_C0307 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004126934.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bph:Bphy_7421 short-chain dehydrogenase/reductase SDR YP_004126935.1 TIGRFAM: histidinol dehydrogenase; KEGG: bxe:Bxe_C0309 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004126936.1 PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_2324 methyltransferase type 11 YP_004126937.1 PFAM: DTW domain containing protein; KEGG: dia:Dtpsy_1758 DTW domain containing protein YP_004126938.1 KEGG: dia:Dtpsy_1757 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004126939.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: ajs:Ajs_1955 sulfatase YP_004126940.1 KEGG: dia:Dtpsy_1755 PAP2 (acid phosphatase) superfamily protein-like protein YP_004126941.1 KEGG: dia:Dtpsy_1754 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004126942.1 KEGG: dia:Dtpsy_1753 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004126943.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB4306 enoyl-CoA hydratase/isomerase family protein YP_004126944.1 KEGG: bbr:BB4305 hypothetical protein YP_004126945.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbr:BB4304 zinc-binding dehydrogenase YP_004126946.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB4303 racemase YP_004126947.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bbr:BB1199 acyl-CoA dehydrogenase YP_004126948.1 KEGG: bbr:BB1197 hypothetical protein YP_004126949.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cti:RALTA_B0352 acyl-CoA transferases/carnitine dehydratase YP_004126950.1 PFAM: regulatory protein TetR; KEGG: bbr:BB4302 TetR family transcriptional regulator YP_004126951.1 KEGG: dia:Dtpsy_1751 electron-transferring-flavoprotein dehydrogenase; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase YP_004126952.1 PFAM: protein of unknown function DUF534; KEGG: ajs:Ajs_1949 hypothetical protein YP_004126953.1 PFAM: inner-membrane translocator; KEGG: dac:Daci_4312 inner-membrane translocator YP_004126954.1 KEGG: dia:Dtpsy_1748 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004126955.1 KEGG: azo:azo3875 sigma-54-dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004126956.1 PFAM: alpha/beta hydrolase fold; KEGG: vap:Vapar_5337 alpha/beta hydrolase fold protein YP_004126957.1 KEGG: azo:azo3873 glucase dehydrogenase alpha subunit; PFAM: glucose-methanol-choline oxidoreductase; monooxygenase FAD-binding YP_004126958.1 KEGG: azo:azo3872 hypothetical protein YP_004126959.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: azo:azo3871 lipoate protein ligase YP_004126960.1 KEGG: azo:azo3870 hypothetical protein; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes YP_004126961.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rfr:Rfer_3967 biotin/lipoyl attachment YP_004126962.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: rfr:Rfer_3966 transketolase YP_004126963.1 KEGG: azo:azo3867 acetoin dehydrogenase, alpha subunit; PFAM: dehydrogenase E1 component YP_004126964.1 KEGG: dia:Dtpsy_1745 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004126965.1 KEGG: ajs:Ajs_1941 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_004126966.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dia:Dtpsy_1743 tripartite ATP-independent periplasmic transporter DctQ component YP_004126967.1 KEGG: dia:Dtpsy_1742 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004126968.1 KEGG: bpt:Bpet1117 metallo-beta-lactamase family protein YP_004126969.1 KEGG: aav:Aave_3145 glycine cleavage system T protein; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_004126970.1 KEGG: dia:Dtpsy_1740 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_004126971.1 KEGG: dia:Dtpsy_1739 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like YP_004126972.1 PFAM: protein of unknown function DUF156; KEGG: ajs:Ajs_2799 hypothetical protein YP_004126973.1 KEGG: dia:Dtpsy_2290 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004126974.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: ajs:Ajs_2801 carboxylesterase; PFAM: esterase YP_004126976.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctt:CtCNB1_2228 transcriptional regulator, LysR family YP_004126977.1 PFAM: Radical SAM domain protein; KEGG: ajs:Ajs_2803 radical SAM domain-containing protein YP_004126978.1 PFAM: transcription elongation factor GreA/GreB domain-containing protein; KEGG: ajs:Ajs_2805 GreA/GreB family elongation factor YP_004126979.1 PFAM: acyltransferase 3; KEGG: dia:Dtpsy_2295 acyltransferase 3 YP_004126980.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD YP_004126981.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dia:Dtpsy_2297 acyl-CoA dehydrogenase domain protein YP_004126982.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit YP_004126983.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit YP_004126984.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dia:Dtpsy_2301 enoyl-CoA hydratase/isomerase YP_004126985.1 PFAM: histone deacetylase superfamily; KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein YP_004126986.1 KEGG: dia:Dtpsy_2303 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase YP_004126987.1 PFAM: protein of unknown function DUF58; KEGG: ajs:Ajs_2815 hypothetical protein YP_004126988.1 KEGG: ajs:Ajs_2816 transglutaminase domain-containing protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004126989.1 TIGRFAM: lytic murein transglycosylase B; KEGG: dia:Dtpsy_2306 lytic murein transglycosylase B YP_004126990.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: lch:Lcho_4275 transketolase central region YP_004126991.1 PFAM: Transketolase domain-containing protein; KEGG: dac:Daci_0728 transketolase domain-containing protein YP_004126992.1 KEGG: pol:Bpro_1457 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004126993.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: lch:Lcho_0406 tripartite ATP-independent periplasmic transporter DctQ YP_004126994.1 KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_004126995.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lch:Lcho_0404 short-chain dehydrogenase/reductase SDR YP_004126996.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_1453 LysR family transcriptional regulator YP_004126997.1 KEGG: hse:Hsero_0506 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_004126998.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bxe:Bxe_B0983 2-hydroxyacid dehydrogenase YP_004126999.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_2307 transcriptional regulator, LysR family YP_004127000.1 PFAM: Uncharacterised protein family UPF0324; KEGG: dia:Dtpsy_2308 hypothetical protein YP_004127001.1 KEGG: dia:Dtpsy_2309 transporter signal peptide protein YP_004127002.1 PFAM: Protein of unknown function DUF2242; KEGG: dia:Dtpsy_2310 lipoprotein YP_004127003.1 PFAM: protein of unknown function DUF214; KEGG: dia:Dtpsy_2312 protein of unknown function DUF214 YP_004127004.1 KEGG: dia:Dtpsy_2313 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127005.1 KEGG: dia:Dtpsy_2314 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004127006.1 KEGG: dia:Dtpsy_2315 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004127007.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: dia:Dtpsy_2317 DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease YP_004127008.1 KEGG: dia:Dtpsy_2323 signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004127009.1 KEGG: dia:Dtpsy_2324 calcium-binding EF-hand-containing protein YP_004127010.1 KEGG: aav:Aave_2112 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004127011.1 KEGG: dia:Dtpsy_2326 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004127012.1 KEGG: dia:Dtpsy_2327 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004127013.1 KEGG: ajs:Ajs_2839 assimilatory nitrite reductase (NAD(P)H) large subunit precursor; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004127014.1 KEGG: ajs:Ajs_2840 assimilatory nitrite reductase (NAD(P)H) small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain YP_004127015.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ajs:Ajs_2841 assimilatory nitrate reductase (NADH) alpha subunit apoprotein YP_004127016.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3273 major facilitator transporter YP_004127017.1 PFAM: SNARE associated Golgi protein; KEGG: net:Neut_2429 hypothetical protein YP_004127018.1 PFAM: Glycosyl transferase, family 3-like; KEGG: ajs:Ajs_2842 glycosyl transferase family protein YP_004127019.1 KEGG: dia:Dtpsy_2332 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004127020.1 PFAM: thioesterase superfamily protein; KEGG: dia:Dtpsy_2333 thioesterase superfamily protein YP_004127021.1 PFAM: HI0933 family protein; KEGG: dia:Dtpsy_2335 HI0933 family protein YP_004127022.1 PFAM: NnrS family protein; KEGG: ajs:Ajs_2847 NnrS family protein YP_004127023.1 KEGG: dia:Dtpsy_2337 hypothetical protein YP_004127024.1 KEGG: reu:Reut_A1607 hypothetical protein YP_004127025.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_C0851 acyl-CoA synthetase YP_004127026.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bxe:Bxe_C0852 acyl-CoA dehydrogenase YP_004127027.1 KEGG: aav:Aave_3937 hypothetical protein YP_004127028.1 KEGG: bxe:Bxe_C0853 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004127029.1 KEGG: bxe:Bxe_C0854 dihydrolipoamide acyltransferase (E2) component of 2-oxoacid dehydrogenase complexes; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; E3 binding domain protein; biotin/lipoyl attachment domain-containing protein YP_004127030.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_C0855 short chain enoyl-CoA hydratase YP_004127031.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: bxe:Bxe_C0856 2-oxo acid dehydrogenase beta subunit YP_004127032.1 KEGG: bxe:Bxe_C0857 2-oxo acid dehydrogenase alpha subunit; PFAM: dehydrogenase E1 component YP_004127033.1 PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_C0858 dehydratase YP_004127034.1 KEGG: bbr:BB4714 hypothetical protein YP_004127035.1 PFAM: protein of unknown function DUF35; KEGG: bxe:Bxe_C0859 hypothetical protein YP_004127036.1 KEGG: bbr:BB4712 hypothetical protein YP_004127037.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bbr:BB4710 acyl-CoA dehydrogenase YP_004127038.1 PFAM: CoA-binding domain protein; KEGG: bbr:BB4708 pimeloyl-CoA synthetase YP_004127039.1 KEGG: bxe:Bxe_C0866 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004127040.1 KEGG: dia:Dtpsy_2338 FeS assembly SUF system protein SufT; TIGRFAM: FeS assembly SUF system protein SufT; PFAM: protein of unknown function DUF59 YP_004127041.1 KEGG: dia:Dtpsy_2339 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein YP_004127042.1 KEGG: ajs:Ajs_2851 aminotransferase, class V; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_004127043.1 PFAM: SufBD protein; KEGG: ajs:Ajs_2852 SufBD protein YP_004127044.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: dia:Dtpsy_2342 FeS assembly ATPase SufC; SMART: AAA ATPase YP_004127045.1 KEGG: dia:Dtpsy_2343 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_004127046.1 KEGG: vap:Vapar_3540 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004127047.1 KEGG: aav:Aave_2091 GatB/YqeY domain-containing protein YP_004127048.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_1963 metal dependent phosphohydrolase YP_004127049.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: dia:Dtpsy_1763 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_004127050.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: pna:Pnap_2658 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_004127051.1 TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold domain protein; KEGG: dia:Dtpsy_1761 transcriptional regulator, LuxR family; SMART: regulatory protein LuxR; PAS domain containing protein YP_004127052.1 PFAM: acyltransferase 3; KEGG: ajs:Ajs_2326 acyltransferase 3 YP_004127053.1 KEGG: ajs:Ajs_2327 N-acetylglutamate synthase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase YP_004127054.1 PFAM: Endoribonuclease L-PSP; KEGG: bam:Bamb_3393 endoribonuclease L-PSP YP_004127055.1 KEGG: bam:Bamb_3394 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004127056.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: vei:Veis_4472 Asp/Glu racemase YP_004127057.1 PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_4471 extracellular ligand-binding receptor YP_004127058.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_4470 inner-membrane translocator YP_004127059.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_4469 inner-membrane translocator YP_004127060.1 KEGG: vei:Veis_4468 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127061.1 KEGG: vei:Veis_4467 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127062.1 PFAM: Extracellular ligand-binding receptor; KEGG: bcm:Bcenmc03_6241 extracellular ligand-binding receptor YP_004127063.1 KEGG: tbd:Tbd_1098 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004127064.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: xau:Xaut_0390 indolepyruvate ferredoxin oxidoreductase YP_004127065.1 KEGG: vei:Veis_4063 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004127066.1 KEGG: dar:Daro_3357 hypothetical protein; PFAM: GAF domain protein; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region YP_004127067.1 PFAM: Disulphide bond formation protein DsbB; KEGG: dia:Dtpsy_1523 disulphide bond formation protein DsbB YP_004127068.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: dia:Dtpsy_1522 sulfate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004127069.1 KEGG: ajs:Ajs_2336 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004127070.1 KEGG: dia:Dtpsy_1520 sulfate ABC transporter, inner membrane subunit CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004127071.1 KEGG: dia:Dtpsy_1519 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004127072.1 PFAM: protein of unknown function DUF1234; KEGG: aav:Aave_2544 hypothetical protein YP_004127073.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_1518 transcriptional regulator, LysR family YP_004127074.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: dia:Dtpsy_1517 NAD(P)H dehydrogenase (quinone) YP_004127075.1 PFAM: NADPH-dependent FMN reductase; KEGG: dia:Dtpsy_1516 NADPH-dependent FMN reductase YP_004127076.1 KEGG: dia:Dtpsy_1515 lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004127077.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_1513 binding-protein-dependent transport systems inner membrane component YP_004127078.1 KEGG: dia:Dtpsy_1512 DL-methionine transporter ATP-binding subunit; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_004127079.1 KEGG: ajs:Ajs_2347 membrane protein-like protein YP_004127080.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: dia:Dtpsy_1509 recombination protein RecR; SMART: Toprim sub domain-containing protein YP_004127081.1 PFAM: Uncharacterised protein family UPF0133; KEGG: ctt:CtCNB1_1631 hypothetical protein YP_004127082.1 SMART: AAA ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; KEGG: dia:Dtpsy_1507 DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein YP_004127083.1 KEGG: cti:RALTA_A0628 transcriptional repressor for molybdate uptake; TIGRFAM: molybdate transport repressor, ModE; PFAM: TOBE domain-containing protein; regulatory protein LysR YP_004127084.1 TIGRFAM: modD protein; KEGG: cli:Clim_0375 ModD protein; PFAM: Quinolinate phosphoribosyl transferase YP_004127085.1 KEGG: dac:Daci_3882 binding-protein-dependent transport systems inner membrane component; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004127086.1 KEGG: dac:Daci_3883 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004127087.1 KEGG: ajs:Ajs_3918 transposase, IS4 family protein; manually curated; PFAM: transposase IS4 family protein YP_004127088.1 PFAM: Methyltransferase type 11; KEGG: bpt:Bpet1277 hypothetical protein YP_004127089.1 KEGG: dac:Daci_4650 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127090.1 PFAM: transport system permease protein; KEGG: dac:Daci_4649 transport system permease protein YP_004127091.1 PFAM: periplasmic binding protein; KEGG: dac:Daci_4648 periplasmic binding protein YP_004127092.1 PFAM: Protein of unknown function DUF2478; KEGG: bpt:Bpet1276 hypothetical protein YP_004127093.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: ctt:CtCNB1_0594 TonB-dependent receptor YP_004127094.1 KEGG: dia:Dtpsy_1506 hypothetical protein YP_004127095.1 PFAM: HI0933 family protein; KEGG: dia:Dtpsy_1505 HI0933 family protein YP_004127096.1 PFAM: Pirin domain protein; KEGG: bpe:BP2937 hypothetical protein YP_004127097.1 PFAM: Pirin domain protein; KEGG: pag:PLES_41041 pirin protein YP_004127098.1 PFAM: UvrD/REP helicase; KEGG: dia:Dtpsy_1503 UvrD/REP helicase YP_004127099.1 KEGG: ajs:Ajs_2356 exonuclease-like protein YP_004127100.1 KEGG: vap:Vapar_2323 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004127101.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: ajs:Ajs_2358 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_004127102.1 KEGG: dia:Dtpsy_1495 ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004127103.1 KEGG: ajs:Ajs_2364 inner membrane transmembrane protein YP_004127104.1 KEGG: ajs:Ajs_2365 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004127105.1 TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: dia:Dtpsy_1492 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004127106.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: ajs:Ajs_2367 two component transcriptional regulator; SMART: response regulator receiver YP_004127107.1 KEGG: ajs:Ajs_2368 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_004127108.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: aav:Aave_2629 phosphate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004127109.1 KEGG: ajs:Ajs_2370 phosphate transporter permease subunit PtsA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_004127110.1 KEGG: dia:Dtpsy_1487 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_004127111.1 KEGG: dia:Dtpsy_1486 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004127112.1 KEGG: dia:Dtpsy_1483 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase YP_004127113.1 PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_2377 phosphohistidine phosphatase, SixA YP_004127114.1 TIGRFAM: Polyphosphate kinase; KEGG: dia:Dtpsy_1480 polyphosphate kinase; PFAM: Polyphosphate kinase YP_004127115.1 KEGG: dia:Dtpsy_1479 ornithine-acyl(acyl carrier protein) N-acyltransferase YP_004127116.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: ajs:Ajs_2380 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004127117.1 KEGG: dia:Dtpsy_1477 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004127118.1 TIGRFAM: dihydropteroate synthase; KEGG: ajs:Ajs_2382 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_004127119.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: dia:Dtpsy_1475 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein YP_004127120.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: dia:Dtpsy_1474 ribosomal RNA methyltransferase RrmJ/FtsJ YP_004127121.1 PFAM: protein of unknown function UPF0044; KEGG: dia:Dtpsy_1473 protein of unknown function UPF0044 YP_004127122.1 KEGG: dac:Daci_4928 hypothetical protein YP_004127123.1 KEGG: ajs:Ajs_2388 hypothetical protein YP_004127124.1 KEGG: dia:Dtpsy_1469 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004127125.1 KEGG: dia:Dtpsy_1458 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_004127126.1 KEGG: aav:Aave_2610 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_004127127.1 KEGG: dia:Dtpsy_1455 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004127128.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: dia:Dtpsy_1454 integration host factor subunit alpha; SMART: histone family protein DNA-binding protein YP_004127129.1 KEGG: ajs:Ajs_2395 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_004127130.1 KEGG: dia:Dtpsy_1452 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_004127131.1 KEGG: ajs:Ajs_2397 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_004127132.1 KEGG: aav:Aave_2857 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35 YP_004127133.1 KEGG: dia:Dtpsy_1449 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_004127134.1 KEGG: ajs:Ajs_2400 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein YP_004127135.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbr:BB4124 enzyme-regulator fusion protein YP_004127136.1 KEGG: dia:Dtpsy_1447 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_004127137.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_2402 hypothetical protein YP_004127138.1 KEGG: dia:Dtpsy_1444 SWIB/MDM2 domain protein; PFAM: SWIB/MDM2 domain-containing protein; SMART: SWIB domain YP_004127139.1 KEGG: dia:Dtpsy_1443 BFD domain protein (2Fe-2S)-binding domain protein; manually curated; PFAM: BFD domain protein [2Fe-2S]-binding domain protein YP_004127140.1 KEGG: dia:Dtpsy_1442 TonB family protein; TIGRFAM: TonB family protein; PFAM: TonB domain YP_004127141.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dia:Dtpsy_1441 MotA/TolQ/ExbB proton channel YP_004127142.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2408 biopolymer transport protein ExbD/TolR YP_004127143.1 PFAM: Hemin uptake protein hemP; KEGG: ajs:Ajs_2409 hypothetical protein YP_004127144.1 PFAM: protein of unknown function DUF336; KEGG: dia:Dtpsy_1438 protein of unknown function DUF336 YP_004127145.1 PFAM: protein of unknown function UPF0005; KEGG: dia:Dtpsy_1437 protein of unknown function UPF0005 YP_004127146.1 KEGG: rme:Rmet_3623 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004127147.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B5563 major facilitator transporter YP_004127148.1 KEGG: ajs:Ajs_2412 hypothetical protein YP_004127149.1 PFAM: small multidrug resistance protein; KEGG: dia:Dtpsy_1617 small multidrug resistance protein YP_004127150.1 PFAM: Chromate transporter; KEGG: dia:Dtpsy_1615 chromate transporter YP_004127151.1 PFAM: Chromate transporter; KEGG: dia:Dtpsy_1614 chromate transporter YP_004127152.1 PFAM: Silent information regulator protein Sir2; KEGG: dia:Dtpsy_1612 silent information regulator protein Sir2 YP_004127153.1 PFAM: regulatory protein TetR; KEGG: dia:Dtpsy_1611 regulatory protein TetR YP_004127154.1 PFAM: protein of unknown function DUF1428; KEGG: dia:Dtpsy_1610 protein of unknown function DUF1428 YP_004127155.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pol:Bpro_2417 glutathione-dependent formaldehyde-activating, GFA YP_004127156.1 KEGG: ajs:Ajs_2265 3-demethylubiquinone-9 3-methyltransferase YP_004127157.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: dia:Dtpsy_1608 activator of HSP90 ATPase 1 family protein YP_004127158.1 KEGG: gur:Gura_0848 3-demethylubiquinone-9 3-methyltransferase YP_004127159.1 KEGG: dac:Daci_4029 hypothetical protein YP_004127160.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: dar:Daro_2725 hypothetical protein YP_004127161.1 KEGG: dia:Dtpsy_1606 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_004127162.1 PFAM: sodium:dicarboxylate symporter; KEGG: dia:Dtpsy_1605 serine/threonine transporter SstT YP_004127163.1 KEGG: dia:Dtpsy_1604 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127164.1 KEGG: dia:Dtpsy_1603 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family YP_004127165.1 PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: dia:Dtpsy_1602 integral membrane protein YP_004127166.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: dia:Dtpsy_1601 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004127167.1 KEGG: dia:Dtpsy_1600 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004127168.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ajs:Ajs_2275 sulphate transporter YP_004127169.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dia:Dtpsy_1598 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004127170.1 KEGG: dia:Dtpsy_1597 cobyrinic acid ac-diamide synthase YP_004127171.1 KEGG: dia:Dtpsy_1825 propionyl-CoA synthetase; TIGRFAM: propionate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004127172.1 PFAM: isochorismatase hydrolase; KEGG: dia:Dtpsy_1824 isochorismatase hydrolase YP_004127173.1 PFAM: NHL repeat containing protein; KEGG: dia:Dtpsy_1823 glucose sorbosone dehydrogenase YP_004127174.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_1814 transcriptional regulator, LysR family YP_004127175.1 KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase [acylating]; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004127176.1 KEGG: ajs:Ajs_2008 hypothetical protein YP_004127177.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_2007 acyl-CoA dehydrogenase domain-containing protein YP_004127178.1 KEGG: dia:Dtpsy_1810 hypothetical protein YP_004127179.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: dia:Dtpsy_1809 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004127180.1 TIGRFAM: methyltransferase FkbM family; KEGG: ter:Tery_1754 FkbM family methyltransferase YP_004127181.1 KEGG: dia:Dtpsy_1801 hypothetical protein YP_004127182.1 KEGG: dia:Dtpsy_1800 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004127183.1 PFAM: protein of unknown function DUF469; KEGG: dia:Dtpsy_1799 protein of unknown function DUF469 YP_004127184.1 TIGRFAM: galactarate dehydratase; KEGG: ajs:Ajs_1998 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_004127185.1 KEGG: ajs:Ajs_1997 hypothetical protein YP_004127186.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ctt:CtCNB1_0239 mandelate racemase/muconate lactonizing YP_004127187.1 KEGG: ctt:CtCNB1_0240 GntR-like protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004127188.1 KEGG: dia:Dtpsy_1794 hypothetical protein YP_004127189.1 TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; KEGG: dia:Dtpsy_1793 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase YP_004127190.1 KEGG: ajs:Ajs_1992 hypothetical protein YP_004127191.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ajs:Ajs_1991 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004127192.1 KEGG: dia:Dtpsy_1790 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_004127193.1 PFAM: Aldehyde Dehydrogenase; KEGG: ctt:CtCNB1_0246 aldehyde dehydrogenase YP_004127194.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: dia:Dtpsy_1788 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_004127195.1 PFAM: Arginine-tRNA-protein transferase domain protein; KEGG: dia:Dtpsy_1787 arginyl-tRNA-protein transferase YP_004127196.1 PFAM: Pirin domain protein; KEGG: ajs:Ajs_1985 pirin domain-containing protein YP_004127197.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_1784 transcriptional regulator, LysR family YP_004127198.1 PFAM: amine oxidase; KEGG: ajs:Ajs_1983 FAD dependent oxidoreductase YP_004127199.1 KEGG: ajs:Ajs_1982 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004127200.1 KEGG: dia:Dtpsy_1781 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_004127201.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dia:Dtpsy_1780 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004127202.1 KEGG: dia:Dtpsy_1779 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_004127203.1 PFAM: dihydrodipicolinate synthetase; KEGG: vap:Vapar_5222 dihydrodipicolinate synthetase YP_004127204.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ctt:CtCNB1_4596 tripartite ATP-independent periplasmic YP_004127205.1 KEGG: ctt:CtCNB1_4595 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004127206.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: ctt:CtCNB1_4594 TRAP dicarboxylate transporter, DctP subunit YP_004127207.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bpd:BURPS668_A0565 malate/L-lactate dehydrogenase family protein YP_004127208.1 KEGG: vap:Vapar_5216 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004127209.1 PFAM: pseudouridine synthase; KEGG: dia:Dtpsy_1777 pseudouridine synthase YP_004127210.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dia:Dtpsy_1832 GCN5-related N-acetyltransferase YP_004127211.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; KEGG: dia:Dtpsy_1831 3-deoxy-D-manno-octulosonic-acid transferase domain protein YP_004127212.1 KEGG: dia:Dtpsy_1830 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004127213.1 KEGG: dac:Daci_0982 hypothetical protein YP_004127214.1 KEGG: vei:Veis_0062 hypothetical protein YP_004127215.1 KEGG: rsc:RCFBP_20182 myo-inositol catabolism protein, protein IolB YP_004127216.1 PFAM: Protein of unknown function DUF2090; PfkB domain protein; KEGG: dac:Daci_0985 ribokinase-like domain-containing protein YP_004127217.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: dac:Daci_0986 RpiR family transcriptional regulator YP_004127218.1 KEGG: ajs:Ajs_2020 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada; PFAM: AlkA domain protein; Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; SMART: Helix-turn-helix, AraC domain; HhH-GPD family protein YP_004127219.1 KEGG: dia:Dtpsy_1828 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_004127220.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dia:Dtpsy_1827 protein of unknown function DUF6 transmembrane YP_004127221.1 KEGG: aav:Aave_3080 adenylate/guanylate cyclase; PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Forkhead-associated protein YP_004127222.1 KEGG: dia:Dtpsy_1593 muramoyltetrapeptide carboxypeptidase; PFAM: peptidase U61 LD-carboxypeptidase A YP_004127223.1 PFAM: CMP/dCMP deaminase zinc-binding; alpha/beta hydrolase fold; KEGG: ajs:Ajs_2282 CMP/dCMP deaminase, zinc-binding YP_004127224.1 PFAM: Negative transcriptional regulator; KEGG: vap:Vapar_2794 FMN-binding negative transcriptional regulator YP_004127225.1 PFAM: peptidase U32; KEGG: dia:Dtpsy_1589 peptidase U32 YP_004127226.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: dia:Dtpsy_1588 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004127227.1 PFAM: protein of unknown function DUF323; KEGG: dia:Dtpsy_1587 protein of unknown function DUF323 YP_004127228.1 KEGG: dia:Dtpsy_1586 methyltransferase; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260 YP_004127229.1 KEGG: dia:Dtpsy_1585 OmpW family protein; manually curated; PFAM: OmpW family protein YP_004127230.1 PFAM: protein of unknown function DUF808; KEGG: ajs:Ajs_2290 hypothetical protein YP_004127231.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: dia:Dtpsy_1582 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004127232.1 KEGG: dia:Dtpsy_1581 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_004127233.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: dia:Dtpsy_1580 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; protein of unknown function DUF294 nucleotidyltransferase; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein YP_004127234.1 KEGG: ctt:CtCNB1_3177 uracil-xanthine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004127235.1 TIGRFAM: peptide deformylase; KEGG: dac:Daci_4855 peptide deformylase; PFAM: formylmethionine deformylase YP_004127236.1 PFAM: protein of unknown function DUF454; KEGG: ajs:Ajs_2296 hypothetical protein YP_004127237.1 KEGG: pzu:PHZ_c2127 hypothetical protein YP_004127238.1 KEGG: pzu:PHZ_c2128 hypothetical protein YP_004127239.1 KEGG: aav:Aave_2572 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004127240.1 PFAM: protein of unknown function DUF192; KEGG: dia:Dtpsy_1560 protein of unknown function DUF192 YP_004127241.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: ajs:Ajs_2300 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type YP_004127242.1 KEGG: ajs:Ajs_2301 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like YP_004127243.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: ajs:Ajs_2302 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_004127244.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dia:Dtpsy_1556 MotA/TolQ/ExbB proton channel YP_004127245.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dia:Dtpsy_1555 biopolymer transport protein ExbD/TolR YP_004127246.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: ajs:Ajs_2305 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_004127247.1 PFAM: protein of unknown function DUF343; KEGG: dia:Dtpsy_1553 protein of unknown function DUF343 YP_004127248.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ajs:Ajs_2307 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_004127249.1 KEGG: dia:Dtpsy_1551 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein YP_004127250.1 KEGG: dia:Dtpsy_1550 asparaginase; PFAM: Asparaginase/glutaminase YP_004127251.1 KEGG: dia:Dtpsy_1549 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_004127252.1 KEGG: ajs:Ajs_2311 hypothetical protein YP_004127253.1 TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: dia:Dtpsy_1546 ATP-dependent helicase HrpA; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein YP_004127254.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ajs:Ajs_2317 acetyl-CoA acetyltransferases; PFAM: Thiolase-like YP_004127255.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dia:Dtpsy_1541 AMP-dependent synthetase and ligase YP_004127256.1 PFAM: BioY protein; KEGG: dia:Dtpsy_1540 BioY protein YP_004127257.1 PFAM: cobalt transport protein; KEGG: ajs:Ajs_2320 cobalt transport protein YP_004127258.1 KEGG: dia:Dtpsy_1538 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127259.1 KEGG: bte:BTH_II1296 hypothetical protein YP_004127260.1 KEGG: gdj:Gdia_1658 hypothetical protein YP_004127261.1 TIGRFAM: lactoylglutathione lyase; KEGG: dia:Dtpsy_1870 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004127262.1 PFAM: GTP-binding protein HSR1-related; KEGG: bpt:Bpet1383 hypothetical protein YP_004127263.1 KEGG: bpt:Bpet1384 hypothetical protein YP_004127264.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpt:Bpet1386 N-hydroxybenzoate transporter YP_004127265.1 KEGG: dia:Dtpsy_0161 hypothetical protein YP_004127266.1 TIGRFAM: muconolactone delta-isomerase; KEGG: bpt:Bpet1390 methylmuconolactone isomerase; PFAM: Muconolactone delta-isomerase YP_004127267.1 KEGG: bpt:Bpet1391 3-oxoadipate enol-lactone hydrolase; TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold YP_004127268.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpt:Bpet1396 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase YP_004127269.1 KEGG: bpt:Bpet1400 catechol 1,2-dioxygenase; TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein YP_004127270.1 KEGG: bpt:Bpet1401 chloromuconate cycloisomerase; TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein YP_004127271.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet1402 transcriptional regulator CatR YP_004127272.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: ajs:Ajs_2048 2-keto-3-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase YP_004127273.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: ajs:Ajs_2049 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004127274.1 KEGG: dia:Dtpsy_1873 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_004127275.1 KEGG: dia:Dtpsy_1874 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004127276.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dia:Dtpsy_1875 tripartite ATP-independent periplasmic transporter DctQ component YP_004127277.1 PFAM: shikimate kinase; manually curated; KEGG: ajs:Ajs_2053 carbohydrate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family YP_004127278.1 KEGG: ajs:Ajs_2054 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004127279.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: dia:Dtpsy_1896 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: AAA ATPase YP_004127280.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: dia:Dtpsy_1897 ATP-dependent Clp protease adaptor protein ClpS YP_004127281.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dia:Dtpsy_1898 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004127282.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: dia:Dtpsy_1899 outer membrane assembly lipoprotein YfiO YP_004127283.1 SMART: helicase c2; KEGG: ajs:Ajs_1828 helicase C2 YP_004127284.1 SMART: protein phosphatase 2C domain protein; KEGG: dia:Dtpsy_1901 protein serine/threonine phosphatase YP_004127285.1 KEGG: ajs:Ajs_1826 hypothetical protein YP_004127286.1 PFAM: AFG1-family ATPase; KEGG: dia:Dtpsy_1903 AFG1-family ATPase YP_004127287.1 KEGG: ajs:Ajs_1824 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004127288.1 KEGG: dia:Dtpsy_1905 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004127289.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: ajs:Ajs_1822 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component YP_004127290.1 PFAM: protein of unknown function UPF0118; KEGG: dia:Dtpsy_1907 protein of unknown function UPF0118 YP_004127291.1 KEGG: dia:Dtpsy_1908 hypothetical protein YP_004127292.1 KEGG: dia:Dtpsy_1909 hypothetical protein YP_004127293.1 PFAM: protein of unknown function DUF1446; KEGG: dia:Dtpsy_1910 protein of unknown function DUF1446 YP_004127294.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_1817 LysR family transcriptional regulator YP_004127295.1 PFAM: UspA domain-containing protein; KEGG: ajs:Ajs_1816 UspA domain-containing protein YP_004127296.1 KEGG: dia:Dtpsy_1915 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004127297.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_1916 binding-protein-dependent transport systems inner membrane component YP_004127298.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_1811 binding-protein-dependent transport systems inner membrane component YP_004127299.1 KEGG: dia:Dtpsy_2487 protein-S-isoprenylcysteine methyltransferase-like protein YP_004127300.1 PFAM: extracellular solute-binding protein family 5; KEGG: dia:Dtpsy_1918 extracellular solute-binding protein family 5 YP_004127301.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_1919 short-chain dehydrogenase/reductase SDR YP_004127302.1 KEGG: rsc:RCFBP_10755 multidrug resistance efflux transporter YP_004127303.1 PFAM: protein of unknown function DUF465; KEGG: cvi:CV_3311 hypothetical protein YP_004127304.1 KEGG: dia:Dtpsy_2251 DNA ligase; PFAM: ATP dependent DNA ligase YP_004127305.1 PFAM: Integral membrane protein TerC; KEGG: aav:Aave_4673 integral membrane protein TerC YP_004127306.1 KEGG: ajs:Ajs_2762 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_004127307.1 KEGG: dia:Dtpsy_2253 hypothetical protein YP_004127308.1 KEGG: dia:Dtpsy_2254 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_004127309.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rfr:Rfer_0879 LysR family transcriptional regulator YP_004127310.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: ajs:Ajs_2520 thiamine pyrophosphate protein YP_004127311.1 PFAM: protein of unknown function UPF0060; KEGG: psa:PST_2099 inner membrane lipoprotein YP_004127312.1 PFAM: integrase family protein; KEGG: mpt:Mpe_A1729 phage integrase family protein YP_004127313.1 KEGG: bch:Bcen2424_3197 NADPH-dependent FMN reductase; TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase YP_004127314.1 KEGG: pol:Bpro_1191 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004127315.1 KEGG: pna:Pnap_2845 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004127316.1 KEGG: shi:Shel_20950 haloacid dehalogenase superfamily enzyme, subfamily IA YP_004127317.1 PFAM: permease; KEGG: app:CAP2UW1_2749 permease YP_004127318.1 KEGG: reu:Reut_B4599 thiol-disulfide isomerase and thioredoxins YP_004127319.1 PFAM: OsmC family protein; KEGG: psa:PST_0230 redox protein, regulator of disulfide bond formation YP_004127320.1 KEGG: rfr:Rfer_3644 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004127321.1 KEGG: rfr:Rfer_3651 hypothetical protein YP_004127322.1 PFAM: glutamine amidotransferase class-II; KEGG: pol:Bpro_1189 glutamine amidotransferase, class-II YP_004127323.1 PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: nis:NIS_0087 hypothetical protein YP_004127324.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: aeh:Mlg_2706 acetyl-CoA acetyltransferases; PFAM: Thiolase-like YP_004127325.1 KEGG: eba:ebA4129 hypothetical protein YP_004127326.1 KEGG: lch:Lcho_1324 redox-active disulfide protein 2 YP_004127327.1 PFAM: permease; KEGG: lch:Lcho_1323 permease YP_004127328.1 manually curated; KEGG: ava:Ava_4263 hypothetical protein YP_004127329.1 manually curated; KEGG: eum:ECUMN_2307 hypothetical protein YP_004127330.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004127331.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004127332.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; KEGG: ajs:Ajs_2233 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein YP_004127333.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tmz:Tmz1t_0991 single-stranded DNA-binding protein YP_004127334.1 KEGG: rpf:Rpic12D_0642 hypothetical protein YP_004127335.1 KEGG: rpf:Rpic12D_0641 hypothetical protein; TIGRFAM: Domain of unknown function DUF1845; PFAM: Domain of unknown function DUF1845 YP_004127336.1 KEGG: rpf:Rpic12D_0640 hypothetical protein YP_004127337.1 KEGG: rpf:Rpic12D_0639 hypothetical protein YP_004127338.1 KEGG: rpf:Rpic12D_0638 hypothetical protein YP_004127339.1 KEGG: rpf:Rpic12D_0637 hypothetical protein YP_004127340.1 KEGG: rpf:Rpic12D_0636 cobyrinic acid ac-diamide synthase YP_004127341.1 PFAM: Prophage CP4-57 regulatory; KEGG: tmz:Tmz1t_1000 phage transcriptional regulator, AlpA YP_004127342.1 KEGG: tmz:Tmz1t_1001 hypothetical protein YP_004127343.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpf:Rpic12D_0633 transcriptional regulator, LysR family YP_004127344.1 KEGG: ajs:Ajs_1232 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_004127345.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: lch:Lcho_2049 RND family efflux transporter MFP subunit YP_004127346.1 KEGG: lch:Lcho_2050 CzcC family heavy metal RND efflux outer membrane protein YP_004127347.1 KEGG: lch:Lcho_2051 hypothetical protein YP_004127348.1 KEGG: maq:Maqu_0130 hypothetical protein YP_004127349.1 KEGG: dia:Dtpsy_2191 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004127350.1 KEGG: ajs:Ajs_2709 hypothetical protein YP_004127351.1 PFAM: cytochrome c class I; KEGG: dia:Dtpsy_2192 cytochrome c class I YP_004127352.1 KEGG: dia:Dtpsy_2193 isoprenylcysteine carboxyl methyltransferase YP_004127353.1 KEGG: dia:Dtpsy_2194 hypothetical protein YP_004127354.1 KEGG: dia:Dtpsy_2195 hypothetical protein YP_004127355.1 KEGG: ajs:Ajs_2667 hypothetical protein YP_004127356.1 PFAM: blue (type 1) copper domain protein; KEGG: net:Neut_0023 blue (type1) copper domain-containing protein YP_004127357.1 PFAM: copper resistance B precursor; KEGG: bmj:BMULJ_00902 copper resistance protein B YP_004127358.1 KEGG: bmj:BMULJ_00903 copper resistance transmembrane protein; TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2 YP_004127359.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: dia:Dtpsy_2201 two component heavy metal response transcriptional regulator, winged helix family; SMART: response regulator receiver YP_004127360.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_2726 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004127361.1 KEGG: ajs:Ajs_2662 hypothetical protein YP_004127362.1 KEGG: vap:Vapar_3675 protein of unknown function DUF411 YP_004127363.1 KEGG: net:Neut_0014 twin-arginine translocation pathway signal; PFAM: multicopper oxidase type 3; multicopper oxidase type 2 YP_004127364.1 PFAM: transposase IS3/IS911 family protein; KEGG: aav:Aave_4117 transposase IS3/IS911 family protein YP_004127365.1 PFAM: Integrase catalytic region; KEGG: aav:Aave_4118 integrase catalytic subunit YP_004127366.1 KEGG: aca:ACP_0600 hypothetical protein YP_004127367.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4649 hypothetical protein YP_004127368.1 manually curated; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: xau:Xaut_4952 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004127369.1 PFAM: protein of unknown function DUF156; KEGG: pde:Pden_3352 hypothetical protein YP_004127370.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpf:Rpic12D_0613 transcriptional regulator, LysR family YP_004127371.1 KEGG: pol:Bpro_5021 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004127372.1 KEGG: pol:Bpro_4958 histone-like DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004127373.1 KEGG: abb:ABBFA_001155 transcriptional regulatory protein QseB YP_004127375.1 KEGG: dia:Dtpsy_0973 hypothetical protein YP_004127376.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_2361 LysR family transcriptional regulator YP_004127377.1 TIGRFAM: tartrate dehydrogenase; KEGG: aav:Aave_2087 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004127378.1 PFAM: Patatin; KEGG: dac:Daci_3706 patatin YP_004127379.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_2084 LysR family transcriptional regulator YP_004127380.1 KEGG: ctt:CtCNB1_3468 TctC YP_004127381.1 KEGG: ctt:CtCNB1_3469 outer membrane protein precursor; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_004127382.1 KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004127383.1 KEGG: ctt:CtCNB1_3471 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase YP_004127384.1 PFAM: protein of unknown function DUF938; KEGG: dia:Dtpsy_2352 protein of unknown function DUF938 YP_004127385.1 TIGRFAM: glutamate racemase; KEGG: ajs:Ajs_2867 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004127386.1 KEGG: aav:Aave_2959 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase YP_004127387.1 KEGG: dac:Daci_0155 N-formimino-L-glutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase YP_004127388.1 TIGRFAM: imidazolonepropionase; KEGG: pol:Bpro_1035 imidazolonepropionase; PFAM: amidohydrolase YP_004127389.1 PFAM: protein of unknown function DUF886; KEGG: aav:Aave_2962 hypothetical protein YP_004127390.1 KEGG: pol:Bpro_1038 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127391.1 KEGG: pol:Bpro_1039 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004127392.1 KEGG: pol:Bpro_1040 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004127393.1 KEGG: pol:Bpro_1041 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004127394.1 TIGRFAM: urocanate hydratase; KEGG: dac:Daci_0150 urocanate hydratase; PFAM: Urocanase YP_004127395.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: ctt:CtCNB1_0166 cytosine/purines/uracil permease YP_004127396.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: ctt:CtCNB1_0165 transcriptional regulator, histidine; SMART: regulatory protein GntR HTH YP_004127397.1 TIGRFAM: histidine ammonia-lyase; KEGG: aav:Aave_2965 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_004127398.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: aav:Aave_2966 histidine utilization repressor; SMART: regulatory protein GntR HTH YP_004127399.1 KEGG: aav:Aave_2967 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127400.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2968 binding-protein-dependent transport systems inner membrane component YP_004127401.1 KEGG: aav:Aave_2969 substrate-binding region of ABC-type glycine betaine transport system YP_004127402.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dac:Daci_0142 acyl-CoA dehydrogenase domain-containing protein YP_004127403.1 KEGG: dac:Daci_0143 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_004127404.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctt:CtCNB1_0157 L-carnitine dehydratase/bile acid-inducible YP_004127405.1 KEGG: ajs:Ajs_2869 hypothetical protein YP_004127406.1 KEGG: dia:Dtpsy_2357 hypothetical protein YP_004127407.1 PFAM: pyruvate carboxyltransferase; KEGG: dia:Dtpsy_2358 pyruvate carboxyltransferase YP_004127408.1 KEGG: dia:Dtpsy_2359 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_004127409.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_2873 LysR family transcriptional regulator YP_004127410.1 KEGG: ajs:Ajs_2874 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP015557; PFAM: Uncharacterised conserved protein UCP015557 YP_004127411.1 KEGG: dia:Dtpsy_2362 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein YP_004127412.1 KEGG: ajs:Ajs_2876 hypothetical protein YP_004127413.1 KEGG: dia:Dtpsy_2364 calcium-binding EF-hand-containing protein; TIGRFAM: sodium symporter protein; PFAM: Na+/solute symporter YP_004127414.1 TIGRFAM: solute symporter protein; KEGG: ajs:Ajs_2878 hypothetical protein YP_004127415.1 KEGG: dia:Dtpsy_2366 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_004127416.1 PFAM: protein of unknown function DUF299; KEGG: dia:Dtpsy_2367 hypothetical protein YP_004127417.1 KEGG: tmz:Tmz1t_2382 heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_004127418.1 KEGG: ajs:Ajs_1330 hypothetical protein YP_004127419.1 KEGG: dia:Dtpsy_1144 hypothetical protein YP_004127420.1 PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_1332 outer membrane efflux protein YP_004127421.1 KEGG: mpt:Mpe_A2670 hypothetical protein YP_004127422.1 KEGG: meh:M301_0051 catalase; PFAM: Catalase related subgroup; Catalase domain protein YP_004127423.1 KEGG: aav:Aave_1376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin YP_004127424.1 TIGRFAM: peroxiredoxin; KEGG: aav:Aave_1375 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_004127425.1 KEGG: dia:Dtpsy_2370 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein YP_004127426.1 PFAM: flagellar transcriptional activator; KEGG: ajs:Ajs_2884 flagellar transcriptional activator, FlhD subunit YP_004127427.1 PFAM: flagellar transcriptional activator FlhC; KEGG: ajs:Ajs_2885 transcriptional activator FlhC YP_004127428.1 KEGG: dia:Dtpsy_2376 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region YP_004127429.1 TIGRFAM: porphobilinogen deaminase; KEGG: dia:Dtpsy_2377 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_004127430.1 KEGG: ajs:Ajs_2891 uroporphyrinogen-III synthase YP_004127431.1 PFAM: protein of unknown function DUF513 hemX; KEGG: ajs:Ajs_2892 protein of unknown function DUF513, HemX YP_004127432.1 PFAM: HemY domain protein; KEGG: ajs:Ajs_2893 HemY domain-containing protein YP_004127433.1 KEGG: net:Neut_1582 cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_004127434.1 PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: net:Neut_1583 cytochrome c oxidase, mono-heme subunit/FixO YP_004127435.1 PFAM: cytochrome c class I; KEGG: net:Neut_1584 cytochrome c, class I YP_004127436.1 KEGG: net:Neut_1585 hypothetical protein YP_004127437.1 KEGG: pol:Bpro_1263 hypothetical protein YP_004127438.1 KEGG: dia:Dtpsy_2382 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_004127439.1 KEGG: dia:Dtpsy_2383 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_004127440.1 PFAM: SirA-like domain-containing protein; KEGG: dia:Dtpsy_2384 SirA family protein YP_004127441.1 PFAM: NUDIX hydrolase; KEGG: dia:Dtpsy_2385 NUDIX hydrolase YP_004127442.1 KEGG: dia:Dtpsy_2386 cysteine synthase B; TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004127443.1 PFAM: Protein of unknown function DUF2274; KEGG: ajs:Ajs_2901 hypothetical protein YP_004127444.1 PFAM: conjugation TrbI family protein; KEGG: rpi:Rpic_2653 conjugation TrbI family protein YP_004127445.1 KEGG: dia:Dtpsy_3498 P-type conjugative transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX YP_004127446.1 KEGG: dia:Dtpsy_3499 conjugal transfer protein TrbF YP_004127447.1 KEGG: dia:Dtpsy_3500 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein YP_004127448.1 KEGG: dac:Daci_2694 lipoprotein YP_004127449.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: dia:Dtpsy_3502 conjugal transfer protein TrbJ YP_004127450.1 KEGG: tgr:Tgr7_1898 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase YP_004127451.1 KEGG: rme:Rmet_1343 conjugal transfer TrbD transmembrane protein YP_004127452.1 PFAM: Conjugal transfer protein TrbC; KEGG: dia:Dtpsy_3505 conjugal transfer protein TrbC YP_004127453.1 KEGG: sml:Smlt1291 conjugal transfer protein; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E YP_004127454.1 KEGG: dac:Daci_2700 CopG/DNA-binding domain-containing protein YP_004127455.1 PFAM: TRAG family protein; KEGG: dac:Daci_2701 conjugal transfer coupling protein TraG YP_004127456.1 KEGG: dia:Dtpsy_3509 hypothetical protein YP_004127457.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_1314 transcriptional regulator, LysR family YP_004127458.1 manually curated; KEGG: dia:Dtpsy_1313 hypothetical protein YP_004127459.1 manually curated; KEGG: dia:Dtpsy_1312 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase YP_004127460.1 PFAM: UspA domain-containing protein; KEGG: dia:Dtpsy_1311 UspA domain protein YP_004127461.1 KEGG: dia:Dtpsy_1310 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004127462.1 KEGG: dia:Dtpsy_1309 hypothetical protein YP_004127463.1 PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: dia:Dtpsy_1308 poly-beta-hydroxybutyrate polymerase domain protein YP_004127464.1 PFAM: regulatory protein TetR; KEGG: dia:Dtpsy_1307 transcriptional regulator, TetR family YP_004127465.1 KEGG: dia:Dtpsy_1306 hypothetical protein YP_004127466.1 PFAM: secretion protein HlyD family protein; KEGG: dia:Dtpsy_1305 hypothetical protein YP_004127467.1 KEGG: dia:Dtpsy_1304 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127468.1 PFAM: ABC transporter; KEGG: dia:Dtpsy_1303 ABC transporter YP_004127469.1 PFAM: ABC transporter; KEGG: dia:Dtpsy_1302 ABC transporter YP_004127470.1 KEGG: dia:Dtpsy_1301 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004127471.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: eba:ebA4623 alcohol dehydrogenase II YP_004127472.1 KEGG: dia:Dtpsy_1300 hypothetical protein YP_004127473.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: dia:Dtpsy_1299 beta-lactamase domain protein YP_004127474.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: dia:Dtpsy_1298 hypothetical protein YP_004127475.1 PFAM: Protein of unknown function DUF2219; KEGG: dia:Dtpsy_1297 hypothetical protein YP_004127476.1 KEGG: dia:Dtpsy_1296 hypothetical protein YP_004127477.1 TIGRFAM: acetate kinase; KEGG: dia:Dtpsy_1295 acetate kinase; PFAM: acetate and butyrate kinase YP_004127478.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; KEGG: dia:Dtpsy_1294 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YP_004127479.1 KEGG: ajs:Ajs_2417 hypothetical protein YP_004127480.1 KEGG: dia:Dtpsy_1431 hypothetical protein YP_004127481.1 KEGG: dia:Dtpsy_1432 transmembrane anti-sigma factor YP_004127482.1 KEGG: dia:Dtpsy_1433 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004127483.1 KEGG: dia:Dtpsy_3434 hypothetical protein YP_004127484.1 KEGG: dia:Dtpsy_3435 hypothetical protein YP_004127485.1 PFAM: flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ajs:Ajs_4088 oxidoreductase FAD/NAD(P)-binding subunit YP_004127486.1 KEGG: dia:Dtpsy_3437 ApbE family lipoprotein; manually curated; PFAM: ApbE family lipoprotein YP_004127487.1 KEGG: dia:Dtpsy_3438 hypothetical protein YP_004127488.1 KEGG: psa:PST_0904 cytochrome b561 YP_004127489.1 KEGG: sti:Sthe_3401 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004127490.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mlu:Mlut_09570 copper chaperone YP_004127491.1 KEGG: nca:Noca_1662 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004127492.1 KEGG: dac:Daci_0453 hypothetical protein YP_004127493.1 PFAM: Peptidase S26, conserved region; KEGG: rme:Rmet_1258 TraF peptidase YP_004127494.1 KEGG: rme:Rmet_1257 hypothetical protein YP_004127495.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004127496.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004127497.1 KEGG: bte:BTH_I0807 integrase protein YP_004127498.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_1631 enoyl-CoA hydratase/isomerase YP_004127499.1 KEGG: azc:AZC_4590 transcriptional regulator YP_004127500.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rlt:Rleg2_6334 AMP-dependent synthetase and ligase YP_004127501.1 PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_5269 hydroxymethylglutaryl-CoA lyase YP_004127502.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: pol:Bpro_5270 carbamoyl-phosphate synthase L chain, ATP-binding YP_004127503.1 KEGG: pol:Bpro_5271 carboxyl transferase; PFAM: carboxyl transferase YP_004127504.1 KEGG: rxy:Rxyl_1851 phenylacetate-CoA ligase YP_004127505.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vei:Veis_3871 enoyl-CoA hydratase/isomerase YP_004127506.1 PFAM: Extracellular ligand-binding receptor; KEGG: mno:Mnod_4450 extracellular ligand-binding receptor YP_004127507.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dia:Dtpsy_1188 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004127508.1 KEGG: dia:Dtpsy_1187 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004127509.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: dia:Dtpsy_1186 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004127510.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: dia:Dtpsy_1185 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_004127511.1 KEGG: ajs:Ajs_2624 hypothetical protein YP_004127512.1 PFAM: major facilitator superfamily MFS_1; KEGG: azo:azo3693 hypothetical protein YP_004127513.1 KEGG: ctt:CtCNB1_0646 histone-like nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004127514.1 KEGG: reh:H16_A2948 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004127515.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_0266 short-chain dehydrogenase/reductase SDR YP_004127516.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: tin:Tint_1589 acyl-CoA dehydrogenase domain protein YP_004127517.1 PFAM: AMP-dependent synthetase and ligase; KEGG: tin:Tint_1587 AMP-dependent synthetase and ligase YP_004127518.1 PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0264 extracellular ligand-binding receptor YP_004127519.1 KEGG: dac:Daci_0263 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127520.1 KEGG: dac:Daci_0262 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127521.1 PFAM: inner-membrane translocator; KEGG: dac:Daci_0261 inner-membrane translocator YP_004127522.1 PFAM: inner-membrane translocator; KEGG: dac:Daci_0260 inner-membrane translocator YP_004127523.1 KEGG: reu:Reut_B3884 hypothetical protein YP_004127524.1 PFAM: porin Gram-negative type; KEGG: bcm:Bcenmc03_6621 porin YP_004127525.1 KEGG: aav:Aave_4649 protein of unknown function DUF894, DitE; manually curated; PFAM: protein of unknown function DUF894 DitE YP_004127526.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB0629 enoyl-CoA hydratase YP_004127527.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_C7306 aldehyde dehydrogenase (acceptor) YP_004127528.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_C7305 aldehyde dehydrogenase (acceptor) YP_004127529.1 PFAM: MmgE/PrpD family protein; KEGG: bpa:BPP0622 hypothetical protein YP_004127530.1 KEGG: bbr:BB0625 hypothetical protein YP_004127531.1 KEGG: ank:AnaeK_1894 hydroxyacylglutathione hydrolase YP_004127532.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_C6756 aldehyde dehydrogenase (acceptor) YP_004127533.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_C7304 zinc-containing alcohol dehydrogenase superfamily protein YP_004127534.1 PFAM: Extracellular ligand-binding receptor; KEGG: jan:Jann_2263 extracellular ligand-binding receptor YP_004127535.1 PFAM: inner-membrane translocator; KEGG: jan:Jann_2267 inner-membrane translocator YP_004127536.1 PFAM: inner-membrane translocator; KEGG: jan:Jann_2266 inner-membrane translocator YP_004127537.1 KEGG: jan:Jann_2265 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127538.1 KEGG: jan:Jann_2264 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127539.1 KEGG: dia:Dtpsy_1751 electron-transferring-flavoprotein dehydrogenase; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase YP_004127540.1 PFAM: HpcH/HpaI aldolase; KEGG: bur:Bcep18194_C7302 HpcH/HpaI aldolase YP_004127541.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_C7301 L-carnitine dehydratase/bile acid-inducible protein F YP_004127542.1 KEGG: bbr:BB0622 hypothetical protein YP_004127543.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit YP_004127544.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit YP_004127545.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bur:Bcep18194_C7297 acyl-CoA dehydrogenase YP_004127546.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_C7296 LysR family transcriptional regulator YP_004127547.1 PFAM: MmgE/PrpD family protein; KEGG: bur:Bcep18194_C7308 MmgE/PrpD YP_004127548.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB0617 CaiB/BaiF family protein YP_004127549.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB0615 AMP-binding enzyme YP_004127550.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bur:Bcep18194_C7332 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004127551.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB0613 short chain dehydrogenase YP_004127552.1 KEGG: bpa:BPP0606 enoyl-CoA hydratase; PFAM: MaoC domain protein dehydratase YP_004127553.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bbr:BB0611 acyl-CoA dehydrogenase YP_004127554.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C7313 alpha/beta hydrolase fold YP_004127555.1 KEGG: bpa:BPP0603 IclR family regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004127556.1 KEGG: bbr:BB0608 IclR family regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004127557.1 PFAM: MmgE/PrpD family protein; KEGG: bur:Bcep18194_C6759 MmgE/PrpD YP_004127558.1 KEGG: bur:Bcep18194_C6760 hypothetical protein YP_004127559.1 KEGG: vei:Veis_2943 hypothetical protein YP_004127560.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_C7484 glucose-methanol-choline oxidoreductase YP_004127561.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_C7485 aldehyde dehydrogenase YP_004127562.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_C7486 LysR family transcriptional regulator YP_004127563.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F YP_004127564.1 KEGG: reu:Reut_A1831 hypothetical protein YP_004127565.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_5272 short chain enoyl-CoA hydratase YP_004127566.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C7276 short-chain dehydrogenase/reductase SDR YP_004127568.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal YP_004127569.1 PFAM: MaoC domain protein dehydratase; KEGG: reu:Reut_A1834 MaoC-like dehydratase YP_004127570.1 PFAM: protein of unknown function DUF1446; KEGG: sth:STH1574 hypothetical protein YP_004127571.1 KEGG: bbt:BBta_2933 hypothetical protein YP_004127572.1 KEGG: eba:ebA306 lipid-transfer protein; PFAM: Beta-ketoacyl synthase YP_004127573.1 KEGG: reu:Reut_A1831 hypothetical protein YP_004127574.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F YP_004127575.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_A1830 L-carnitine dehydratase/bile acid-inducible protein F YP_004127576.1 KEGG: dac:Daci_0790 hypothetical protein YP_004127577.1 KEGG: jan:Jann_3827 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase YP_004127578.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_C7493 alpha-methylacyl-CoA racemase YP_004127579.1 KEGG: bbr:BB0605 hypothetical protein YP_004127580.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2640 LysR family transcriptional regulator YP_004127581.1 PFAM: MmgE/PrpD family protein; KEGG: bur:Bcep18194_B2639 hypothetical protein YP_004127582.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB0604 short chain dehydrogenase YP_004127583.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; alanine dehydrogenase/PNT domain protein; KEGG: bbr:BB0603 NADH:flavin oxidoreductase / NADH oxidase family protein YP_004127584.1 KEGG: bbr:BB0602 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127585.1 KEGG: bbr:BB0601 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127586.1 PFAM: inner-membrane translocator; KEGG: bbr:BB0600 branched-chain amino acid transport system permease protein YP_004127587.1 PFAM: inner-membrane translocator; KEGG: bbr:BB0599 branched-chain amino acid transport system permease protein YP_004127588.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0598 extracellular ligand binding protein YP_004127589.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB0597 enoyl-CoA hydratase/isomerase family protein YP_004127590.1 PFAM: nitroreductase; KEGG: bbr:BB0596 nitroreductase family protein YP_004127591.1 KEGG: bbr:BB0595 hypothetical protein YP_004127592.1 KEGG: bbr:BB0594 hypothetical protein YP_004127593.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB0593 CaiB/BaiF family protein YP_004127594.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_B2644 L-carnitine dehydratase/bile acid-inducible protein F YP_004127595.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bur:Bcep18194_C7290 acyl-CoA dehydrogenase YP_004127596.1 PFAM: MaoC domain protein dehydratase; KEGG: bur:Bcep18194_C7289 MaoC-like dehydratase YP_004127597.1 KEGG: bbr:BB0589 hypothetical protein; PFAM: HpcH/HpaI aldolase YP_004127598.1 PFAM: regulatory protein TetR; KEGG: dac:Daci_4464 TetR family transcriptional regulator YP_004127599.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: dia:Dtpsy_1130 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_004127600.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: dia:Dtpsy_1129 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase YP_004127601.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: dia:Dtpsy_1128 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_004127602.1 KEGG: dia:Dtpsy_1127 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type YP_004127603.1 PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1207 acriflavin resistance protein YP_004127604.1 KEGG: dia:Dtpsy_1125 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004127605.1 KEGG: dia:Dtpsy_1124 squalene synthase HpnC; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase YP_004127606.1 TIGRFAM: squalene synthase HpnD; KEGG: dia:Dtpsy_1121 squalene synthase HpnD; PFAM: Squalene/phytoene synthase YP_004127607.1 KEGG: rfr:Rfer_3023 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004127608.1 KEGG: ajs:Ajs_1201 amine oxidase; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase YP_004127609.1 KEGG: pna:Pnap_2063 hypothetical protein YP_004127610.1 KEGG: dia:Dtpsy_1119 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004127611.1 PFAM: Protein of unknown function DUF2069, membrane; KEGG: dia:Dtpsy_1118 membrane protein-like protein YP_004127612.1 PFAM: FAD linked oxidase domain protein; KEGG: dia:Dtpsy_1117 FAD linked oxidase domain protein YP_004127613.1 TIGRFAM: thymidylate synthase; KEGG: ajs:Ajs_1197 thymidylate synthase; PFAM: thymidylate synthase YP_004127614.1 KEGG: dia:Dtpsy_1115 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_004127615.1 KEGG: vap:Vapar_3238 hypothetical protein YP_004127616.1 PFAM: OmpA/MotB domain protein; KEGG: vap:Vapar_3239 hypothetical protein YP_004127617.1 PFAM: protein of unknown function DUF802; KEGG: vap:Vapar_3240 protein of unknown function DUF802 YP_004127618.1 KEGG: vap:Vapar_3241 hypothetical protein YP_004127619.1 PFAM: transposase IS4 family protein; KEGG: nwi:Nwi_1015 transposase, IS4 YP_004127620.1 KEGG: rle:pRL110581 transposase-related protein YP_004127621.1 KEGG: tgr:Tgr7_1884 response regulator receiver protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004127622.1 KEGG: tgr:Tgr7_1885 sensor protein KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004127623.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: pap:PSPA7_3714 K+-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit YP_004127624.1 KEGG: tgr:Tgr7_1888 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004127625.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: pap:PSPA7_3712 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit YP_004127626.1 KEGG: shn:Shewana3_1258 XRE family transcriptional regulator YP_004127627.1 KEGG: dia:Dtpsy_1114 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_004127628.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: dia:Dtpsy_1112 nitrogen metabolism transcriptional regulator, NtrC, fis family; SMART: response regulator receiver; AAA ATPase YP_004127629.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dia:Dtpsy_1111 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004127630.1 KEGG: dia:Dtpsy_1110 signal peptide protein YP_004127631.1 KEGG: aav:Aave_1442 L-glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_004127632.1 PFAM: molybdopterin binding domain; KEGG: ajs:Ajs_1188 molybdopterin binding domain-containing protein YP_004127633.1 KEGG: dia:Dtpsy_1107 transmembrane protein YP_004127634.1 PFAM: fatty acid hydroxylase; KEGG: dia:Dtpsy_1106 fatty acid hydroxylase YP_004127635.1 KEGG: dia:Dtpsy_1105 polysaccharide deacetylase; manually curated; PFAM: polysaccharide deacetylase YP_004127636.1 KEGG: dia:Dtpsy_1104 hypothetical protein YP_004127637.1 PFAM: pseudouridine synthase; KEGG: ajs:Ajs_1183 ribosomal small subunit pseudouridine synthase A YP_004127638.1 PFAM: phosphoribosyltransferase; KEGG: ajs:Ajs_1182 phosphoribosyltransferase YP_004127639.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: dia:Dtpsy_1101 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_004127640.1 KEGG: ajs:Ajs_1180 tRNA synthetase, class II (G, H, P and S); TIGRFAM: histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S) YP_004127641.1 PFAM: Protein of unknown function DUF2065; KEGG: ajs:Ajs_1179 hypothetical protein YP_004127642.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: ajs:Ajs_1178 HflC protein; SMART: band 7 protein YP_004127643.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: dia:Dtpsy_1097 HflK protein; SMART: band 7 protein YP_004127644.1 KEGG: ajs:Ajs_1176 small GTP-binding protein; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related YP_004127645.1 KEGG: dia:Dtpsy_1095 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_004127646.1 KEGG: dia:Dtpsy_1094 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004127647.1 KEGG: dia:Dtpsy_1093 outer membrane assembly lipoprotein YfgL; TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat-containing protein YP_004127648.1 PFAM: Protein of unknown function DUF2133; KEGG: dia:Dtpsy_1092 hypothetical protein YP_004127649.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: dia:Dtpsy_1091 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004127650.1 KEGG: dia:Dtpsy_1090 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_004127651.1 KEGG: dia:Dtpsy_1089 hypothetical protein YP_004127652.1 KEGG: dia:Dtpsy_1088 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_1 repeat-containing protein YP_004127653.1 KEGG: dia:Dtpsy_1087 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_004127654.1 PFAM: nucleoside diphosphate kinase; KEGG: ajs:Ajs_1166 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_004127655.1 KEGG: dia:Dtpsy_1085 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004127656.1 KEGG: dia:Dtpsy_1084 chromosome segregation and condensation protein, ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_004127657.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: dia:Dtpsy_1083 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_004127658.1 KEGG: dia:Dtpsy_1082 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004127659.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: dia:Dtpsy_1081 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004127660.1 KEGG: ajs:Ajs_1160 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_004127661.1 SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: dia:Dtpsy_1078 diguanylate cyclase; PFAM: GGDEF domain containing protein YP_004127662.1 KEGG: dia:Dtpsy_1077 alkaline phosphatase YP_004127663.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_0788 LysR family transcriptional regulator YP_004127664.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: dac:Daci_0789 FMN-dependent alpha-hydroxy acid dehydrogenase YP_004127665.1 KEGG: dac:Daci_5118 hypothetical protein YP_004127666.1 KEGG: bja:bll6360 bifunctional enzyme 2-hydroxyhepta-2,4-diene-1,7-dioatesomerase 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase protein; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004127667.1 PFAM: regulatory protein TetR; KEGG: bph:Bphy_3516 TetR family transcriptional regulator YP_004127668.1 SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; manually curated; KEGG: dia:Dtpsy_1076 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein YP_004127669.1 KEGG: dac:Daci_2259 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004127670.1 PFAM: acriflavin resistance protein; KEGG: dac:Daci_2258 acriflavin resistance protein YP_004127671.1 PFAM: acriflavin resistance protein; KEGG: dac:Daci_2257 acriflavin resistance protein YP_004127672.1 KEGG: dac:Daci_2256 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; protein of unknown function Spy-related YP_004127673.1 PFAM: alpha/beta hydrolase fold; KEGG: dia:Dtpsy_1074 alpha/beta hydrolase fold protein YP_004127674.1 KEGG: ajs:Ajs_1152 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_004127675.1 KEGG: vap:Vapar_3609 hypothetical protein YP_004127676.1 KEGG: vei:Veis_2284 hypothetical protein YP_004127677.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: vei:Veis_2283 signal transduction histidine kinase, LytS YP_004127678.1 KEGG: dia:Dtpsy_1069 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004127679.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpe:BP2600 hypothetical protein YP_004127680.1 PFAM: major facilitator superfamily MFS_1; KEGG: dia:Dtpsy_1068 major facilitator superfamily MFS_1 YP_004127681.1 PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_1146 monooxygenase, FAD-binding YP_004127682.1 KEGG: ajs:Ajs_1145 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein YP_004127683.1 KEGG: dia:Dtpsy_1065 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004127684.1 TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: dia:Dtpsy_1064 diadenosine tetraphosphatase; PFAM: metallophosphoesterase YP_004127685.1 PFAM: ApbE family lipoprotein; KEGG: dia:Dtpsy_1063 ApbE family lipoprotein YP_004127686.1 PFAM: cytochrome c class I; KEGG: dia:Dtpsy_1062 cytochrome c class I YP_004127687.1 KEGG: dia:Dtpsy_1061 hypothetical protein YP_004127688.1 KEGG: ajs:Ajs_1139 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II YP_004127689.1 PFAM: FMN-binding domain protein; KEGG: dia:Dtpsy_1059 FMN-binding domain protein YP_004127690.1 KEGG: dia:Dtpsy_1058 periplasmic copper-binding; PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat YP_004127691.1 KEGG: dia:Dtpsy_1057 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127692.1 KEGG: dia:Dtpsy_1056 ABC transporter YP_004127693.1 KEGG: dia:Dtpsy_1055 NosL family protein YP_004127694.1 KEGG: dia:Dtpsy_1054 hypothetical protein YP_004127695.1 KEGG: dia:Dtpsy_1053 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004127696.1 PFAM: protein of unknown function zinc metallopeptidase; KEGG: dia:Dtpsy_1052 protein of unknown function zinc metallopeptidase putative YP_004127697.1 TIGRFAM: deoxycytidine triphosphate deaminase; KEGG: dia:Dtpsy_1050 deoxycytidine triphosphate deaminase YP_004127698.1 PFAM: protein of unknown function DUF989; KEGG: ajs:Ajs_1128 hypothetical protein YP_004127699.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; KEGG: ajs:Ajs_1125 hypothetical protein YP_004127700.1 KEGG: dia:Dtpsy_1044 hypothetical protein YP_004127701.1 TIGRFAM: hydroxyisourate hydrolase; KEGG: dia:Dtpsy_1043 hydroxyisourate hydrolase; PFAM: Transthyretin YP_004127702.1 TIGRFAM: gamma-glutamyltransferase; KEGG: dac:Daci_2120 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004127703.1 KEGG: dac:Daci_0940 hypothetical protein YP_004127704.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: dac:Daci_2119 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004127705.1 TIGRFAM: hydroxypyruvate isomerase; KEGG: ctt:CtCNB1_3709 xylose isomerase-like TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004127706.1 KEGG: dac:Daci_2117 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004127707.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_2116 LysR family transcriptional regulator YP_004127708.1 KEGG: lch:Lcho_4024 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004127709.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B0665 aminotransferase YP_004127710.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: tmz:Tmz1t_1334 transcriptional regulator, LysR family YP_004127711.1 KEGG: ajs:Ajs_1122 hydroxypyruvate reductase; PFAM: MOFRL domain protein YP_004127712.1 KEGG: dia:Dtpsy_1041 hypothetical protein YP_004127713.1 TIGRFAM: tartrate dehydrogenase; KEGG: ajs:Ajs_1120 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004127714.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_1039 transcriptional regulator, LysR family YP_004127715.1 KEGG: dia:Dtpsy_1038 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004127716.1 TIGRFAM: urate catabolism protein; KEGG: dia:Dtpsy_1037 urate catabolism protein; PFAM: polysaccharide deacetylase YP_004127717.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; KEGG: ajs:Ajs_1115 bifunctional OHCU decarboxylase/allantoate amidohydrolase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; peptidase M20; peptidase dimerisation domain protein YP_004127718.1 PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: dia:Dtpsy_1035 peptidase dimerisation domain protein YP_004127719.1 KEGG: dia:Dtpsy_2395 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004127720.1 KEGG: dac:Daci_2107 xanthine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004127721.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: ajs:Ajs_1112 malic enzyme YP_004127722.1 PFAM: YceI family protein; KEGG: dia:Dtpsy_1028 YceI family protein YP_004127723.1 PFAM: YceI family protein; KEGG: dia:Dtpsy_1027 YceI family protein YP_004127724.1 KEGG: dia:Dtpsy_1026 cytochrome b561 YP_004127725.1 KEGG: ajs:Ajs_1106 hypothetical protein YP_004127726.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dia:Dtpsy_2562 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004127727.1 KEGG: dia:Dtpsy_2563 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc YP_004127728.1 PFAM: Aldehyde Dehydrogenase; KEGG: bpd:BURPS668_A2080 piperideine-6-carboxylate dehydrogenase YP_004127729.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: dia:Dtpsy_2565 replicative DNA helicase; SMART: AAA ATPase YP_004127730.1 KEGG: dia:Dtpsy_2566 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_004127731.1 KEGG: aav:Aave_1230 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_004127732.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dia:Dtpsy_2568 primosomal replication protein YP_004127733.1 KEGG: dia:Dtpsy_2569 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_004127734.1 PFAM: GrpE protein; KEGG: dia:Dtpsy_2570 heat shock protein GrpE YP_004127735.1 KEGG: dia:Dtpsy_2571 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_004127736.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: dia:Dtpsy_2572 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_004127737.1 PFAM: protein of unknown function DUF1555; KEGG: maq:Maqu_1010 hypothetical protein YP_004127738.1 KEGG: rfr:Rfer_2475 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004127739.1 PFAM: peptidase U32; KEGG: ajs:Ajs_3220 peptidase U32 YP_004127740.1 PFAM: peptidase U32; KEGG: ajs:Ajs_3221 peptidase U32 YP_004127741.1 PFAM: Sterol-binding domain protein; KEGG: ajs:Ajs_3222 hypothetical protein YP_004127742.1 PFAM: DGC domain protein; KEGG: ajs:Ajs_3223 hypothetical protein YP_004127743.1 KEGG: dia:Dtpsy_2577 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004127744.1 KEGG: ajs:Ajs_3225 3-octaprenyl-4hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_004127745.1 PFAM: cytochrome P450; KEGG: ajs:Ajs_3226 cytochrome P450 YP_004127746.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: dia:Dtpsy_2580 beta-lactamase domain protein YP_004127747.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_2581 transcriptional regulator, LysR family YP_004127748.1 KEGG: ajs:Ajs_3229 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_004127749.1 PFAM: Entericidin EcnAB; KEGG: dac:Daci_5236 entericidin EcnAB YP_004127750.1 KEGG: dia:Dtpsy_2585 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004127751.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: dia:Dtpsy_2586 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004127752.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: ctt:CtCNB1_1004 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004127753.1 TIGRFAM: FimV N-terminal domain; FimV C-terminal domain; KEGG: ajs:Ajs_3236 transmembrane protein YP_004127754.1 KEGG: dia:Dtpsy_2590 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004127755.1 KEGG: ajs:Ajs_3238 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_004127756.1 KEGG: ajs:Ajs_3239 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004127757.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: ajs:Ajs_3240 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain YP_004127758.1 KEGG: ajs:Ajs_3241 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_004127759.1 PFAM: protein of unknown function YGGT; KEGG: dia:Dtpsy_2595 protein of unknown function YGGT YP_004127760.1 KEGG: vei:Veis_4864 peptidase S16, lon domain-containing protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein YP_004127761.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: pol:Bpro_3983 polysaccharide biosynthesis protein CapD YP_004127762.1 PFAM: polysaccharide biosynthesis protein; KEGG: bpt:Bpet1527 hypothetical protein YP_004127763.1 KEGG: bpt:Bpet1526 acetyltransferase YP_004127764.1 PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet1525 glycosyltransferase YP_004127765.1 PFAM: glycosyl transferase family 2; KEGG: bpt:Bpet1524 glycosyltransferase YP_004127766.1 PFAM: Methyltransferase type 11; KEGG: mpt:Mpe_A0605 hypothetical protein YP_004127767.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein YP_004127768.1 PFAM: sugar transferase; KEGG: lch:Lcho_0300 sugar transferase YP_004127769.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: ajs:Ajs_3250 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004127770.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_3252 small-conductance mechanosensitive channel-like protein YP_004127771.1 PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_4331 extracellular ligand-binding receptor YP_004127772.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2607 inner-membrane translocator YP_004127773.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_2608 leucine/isoleucine/valine transporter permease subunit YP_004127774.1 KEGG: dac:Daci_4334 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127775.1 KEGG: dia:Dtpsy_2610 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004127776.1 PFAM: phosphofructokinase; KEGG: ajs:Ajs_3260 6-phosphofructokinase YP_004127777.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dia:Dtpsy_2614 beta-N-acetylhexosaminidase YP_004127778.1 KEGG: dia:Dtpsy_2615 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_004127779.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: dia:Dtpsy_2616 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ YP_004127780.1 KEGG: ajs:Ajs_3265 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_004127781.1 KEGG: dia:Dtpsy_2619 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_004127782.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: ajs:Ajs_3267 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_004127783.1 KEGG: dia:Dtpsy_2621 transmembrane protein YP_004127784.1 KEGG: dia:Dtpsy_2622 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_004127785.1 KEGG: dia:Dtpsy_2623 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004127786.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: dia:Dtpsy_2624 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004127787.1 KEGG: dia:Dtpsy_2625 sigma E regulatory protein, MucB/RseB; manually curated; PFAM: MucB/RseB family protein YP_004127788.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: dia:Dtpsy_2626 anti sigma-E protein, RseA YP_004127789.1 KEGG: dia:Dtpsy_2627 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004127790.1 KEGG: dia:Dtpsy_2628 hypothetical protein YP_004127791.1 KEGG: dia:Dtpsy_2629 3-oxoacyl-(acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_004127792.1 KEGG: ctt:CtCNB1_0973 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_004127793.1 KEGG: dia:Dtpsy_2631 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004127794.1 KEGG: ajs:Ajs_3279 [acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_004127795.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: dia:Dtpsy_2633 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_004127796.1 manually curated; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; KEGG: dia:Dtpsy_2634 glycerol-3-phosphate acyltransferase PlsX; PFAM: fatty acid synthesis plsX protein YP_004127797.1 KEGG: aav:Aave_1181 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_004127798.1 PFAM: protein of unknown function DUF177; KEGG: dia:Dtpsy_2636 protein of unknown function DUF177 YP_004127799.1 KEGG: dia:Dtpsy_2637 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004127800.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dia:Dtpsy_2638 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004127801.1 PFAM: peptidase S49; KEGG: dia:Dtpsy_2639 peptidase S49 YP_004127802.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dia:Dtpsy_2640 Rieske (2Fe-2S) domain protein YP_004127803.1 KEGG: dia:Dtpsy_2641 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004127804.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; Zinc finger, FLYWCH-type; KEGG: dia:Dtpsy_2642 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_004127805.1 KEGG: ajs:Ajs_3290 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004127806.1 PFAM: protein of unknown function DUF328; KEGG: dia:Dtpsy_2644 hypothetical protein YP_004127807.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: ajs:Ajs_3293 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit YP_004127808.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: ajs:Ajs_3294 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004127809.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: dia:Dtpsy_2648 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAC repeat-containing protein YP_004127810.1 KEGG: aav:Aave_1964 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_004127811.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB0984 LysR family transcriptional regulator YP_004127812.1 KEGG: bbr:BB0983 hypothetical protein YP_004127813.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB0982 hypothetical protein YP_004127814.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bbr:BB0981 acyl-CoA dehydrogenase YP_004127815.1 KEGG: dia:Dtpsy_2650 hypothetical protein YP_004127816.1 KEGG: ajs:Ajs_3298 (S)-2-hydroxy-acid oxidase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_004127817.1 PFAM: OmpA/MotB domain protein; KEGG: dac:Daci_3484 OmpA/MotB domain-containing protein YP_004127818.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: dac:Daci_3483 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein YP_004127819.1 KEGG: dac:Daci_3482 hypothetical protein YP_004127820.1 TIGRFAM: penicillin-binding protein 1C; KEGG: ajs:Ajs_3299 penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein YP_004127821.1 KEGG: dia:Dtpsy_2653 hypothetical protein YP_004127822.1 KEGG: bbr:BB0464 dehydratase/racemase YP_004127823.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: app:CAP2UW1_2497 acyl-CoA dehydrogenase domain protein YP_004127824.1 PFAM: CoA-binding domain protein; KEGG: dac:Daci_1885 CoA-binding domain-containing protein YP_004127825.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rme:Rmet_5425 butyryl-CoA dehydrogenase YP_004127826.1 KEGG: mms:mma_1624 L-asparaginase; PFAM: Asparaginase/glutaminase YP_004127827.1 KEGG: vap:Vapar_4821 hypothetical protein YP_004127828.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_2067 LysR family transcriptional regulator YP_004127829.1 PFAM: metallophosphoesterase; KEGG: dac:Daci_4972 metallophosphoesterase YP_004127830.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: dia:Dtpsy_2661 alpha-2-macroglobulin domain protein YP_004127831.1 KEGG: ajs:Ajs_3311 hypothetical protein YP_004127832.1 KEGG: dia:Dtpsy_2664 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004127833.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: ajs:Ajs_3313 histidine kinase internal region YP_004127834.1 KEGG: dia:Dtpsy_2507 lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004127835.1 PFAM: SpoVR family protein; KEGG: dac:Daci_2329 SpoVR family protein YP_004127836.1 PFAM: protein of unknown function DUF444; KEGG: dac:Daci_2328 hypothetical protein YP_004127837.1 KEGG: ctt:CtCNB1_1949 serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_004127838.1 KEGG: dia:Dtpsy_2510 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004127839.1 KEGG: dia:Dtpsy_2511 hemerythrin HHE cation binding domain protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein YP_004127840.1 KEGG: aav:Aave_1570 globin-like protein YP_004127841.1 KEGG: dia:Dtpsy_2512 hypothetical protein YP_004127842.1 KEGG: ajs:Ajs_3166 hypothetical protein YP_004127843.1 PFAM: aldo/keto reductase; KEGG: ajs:Ajs_3167 aldo/keto reductase YP_004127844.1 KEGG: dia:Dtpsy_2515 SlyX family protein YP_004127845.1 PFAM: aminotransferase class I and II; KEGG: aav:Aave_1563 GntR family transcriptional regulator YP_004127846.1 PFAM: transcription activator effector binding; KEGG: dac:Daci_3099 AraC family transcriptional regulator YP_004127847.1 KEGG: dac:Daci_2828 hypothetical protein YP_004127848.1 PFAM: Amidase; KEGG: dac:Daci_2827 amidase YP_004127849.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_2826 LysR family transcriptional regulator YP_004127850.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: ajs:Ajs_3170 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_004127851.1 KEGG: pag:PLES_35831 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_004127852.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: ajs:Ajs_3176 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_004127853.1 KEGG: ajs:Ajs_3178 adenosylcobyric acid synthase (glutamine-hydrolysing); TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004127854.1 PFAM: aminotransferase class I and II; KEGG: dia:Dtpsy_2532 aminotransferase class I and II YP_004127855.1 KEGG: ajs:Ajs_3180 adenosylcobinamide-phosphate synthase; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_004127856.1 KEGG: ajs:Ajs_3182 type-4 fimbrial pilin related signal peptide protein YP_004127857.1 TIGRFAM: type IV pilus modification protein PilV; KEGG: dac:Daci_5194 type IV pilus modification protein PilV YP_004127858.1 KEGG: dac:Daci_5195 hypothetical protein YP_004127859.1 KEGG: dac:Daci_5196 hypothetical protein YP_004127860.1 KEGG: dac:Daci_5197 FG-GAP repeat-containing protein YP_004127861.1 KEGG: dia:Dtpsy_2540 fimbrial protein pilin YP_004127862.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: dia:Dtpsy_2542 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_004127863.1 KEGG: dia:Dtpsy_2543 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004127864.1 PFAM: dihydrouridine synthase DuS; KEGG: dia:Dtpsy_2544 dihydrouridine synthase DuS YP_004127865.1 PFAM: methyltransferase small; KEGG: aav:Aave_1253 methyltransferase small YP_004127866.1 KEGG: dia:Dtpsy_2546 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase YP_004127867.1 PFAM: Aldehyde Dehydrogenase; KEGG: dia:Dtpsy_2547 aldehyde dehydrogenase YP_004127868.1 KEGG: dia:Dtpsy_2549 hypothetical protein YP_004127869.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: dia:Dtpsy_2550 ATP-dependent chaperone ClpB; SMART: AAA ATPase YP_004127870.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: ajs:Ajs_3199 molybdopterin synthase subunit MoaE YP_004127871.1 KEGG: dia:Dtpsy_2552 hypothetical protein YP_004127872.1 KEGG: dia:Dtpsy_2553 hypothetical protein YP_004127873.1 KEGG: dia:Dtpsy_2554 hypothetical protein YP_004127874.1 KEGG: dac:Daci_5213 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004127875.1 KEGG: dia:Dtpsy_2555 molybdopterin converting factor, subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_004127876.1 KEGG: ajs:Ajs_3203 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_004127877.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: dia:Dtpsy_2557 molybdopterin-guanine dinucleotide biosynthesis protein B YP_004127878.1 TIGRFAM: threonine synthase; KEGG: dia:Dtpsy_2558 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004127879.1 PFAM: PilT protein domain protein; KEGG: geo:Geob_1146 PilT protein domain protein YP_004127880.1 TIGRFAM: prevent-host-death family protein; KEGG: bts:Btus_3191 prevent-host-death family protein YP_004127881.1 KEGG: ajs:Ajs_3206 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein YP_004127882.1 PFAM: aminotransferase class I and II; KEGG: dia:Dtpsy_2560 aminotransferase AlaT YP_004127883.1 PFAM: protein of unknown function DUF498; KEGG: dia:Dtpsy_2561 protein of unknown function DUF498 YP_004127884.1 KEGG: vap:Vapar_5507 hypothetical protein YP_004127885.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rme:Rmet_5530 acyl-CoA dehydrogenase YP_004127886.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: reh:H16_B0372 pimeloyl-CoA dehydrogenase (small subunit) YP_004127887.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: rpi:Rpic_2640 electron transfer flavoprotein alpha subunit YP_004127888.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dia:Dtpsy_2299 electron transfer flavoprotein alpha/beta-subunit YP_004127889.1 KEGG: vap:Vapar_1676 hypothetical protein YP_004127890.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: vap:Vapar_0843 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004127891.1 PFAM: protein of unknown function DUF35; KEGG: bbr:BB4332 hypothetical protein YP_004127892.1 KEGG: vei:Veis_4266 hypothetical protein YP_004127893.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_C0267 short chain enoyl-CoA hydratase YP_004127894.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: fal:FRAAL3384 acyl-CoA dehydrogenase YP_004127895.1 PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: reu:Reut_B4556 CoA-binding YP_004127896.1 PFAM: protein of unknown function DUF35; KEGG: rpc:RPC_1073 hypothetical protein YP_004127897.1 KEGG: rpc:RPC_1074 thiolase YP_004127898.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_0344 enoyl-CoA hydratase YP_004127899.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: rme:Rmet_5110 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase YP_004127900.1 KEGG: gct:GC56T3_1469 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004127901.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: pol:Bpro_5276 acyl-CoA dehydrogenase-like YP_004127902.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: vap:Vapar_1314 acyl-CoA dehydrogenase domain protein YP_004127903.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_0321 1,4-dihydroxy-2-naphthoate synthase YP_004127904.1 KEGG: vap:Vapar_5494 gamma-BHC dehydrochlorinase YP_004127905.1 KEGG: reu:Reut_B3884 hypothetical protein YP_004127906.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azl:AZL_d00150 3-hydroxybutyrate dehydrogenase YP_004127907.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pag:PLES_04421 acyl-CoA transferase YP_004127908.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_4672 3-oxoacyl-(acyl-carrier-protein) reductase YP_004127909.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ara:Arad_7507 3-oxoacyl-(acyl-carrier-protein) reductase protein YP_004127910.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pde:Pden_3227 L-carnitine dehydratase/bile acid-inducible protein F YP_004127911.1 KEGG: reh:H16_B0202 extra-cytoplasmic solute receptor YP_004127912.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gbm:Gbem_2134 NADH:flavin oxidoreductase/NADH oxidase YP_004127913.1 PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_2354 methyltransferase type 11 YP_004127914.1 KEGG: dia:Dtpsy_1019 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_004127915.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: ctt:CtCNB1_1848 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_004127916.1 manually curated; PFAM: ABC transporter related; KEGG: dia:Dtpsy_1017 ABC transporter related; SMART: AAA ATPase YP_004127917.1 PFAM: transport system permease protein; KEGG: dia:Dtpsy_1016 transport system permease protein YP_004127918.1 PFAM: periplasmic binding protein; KEGG: dia:Dtpsy_1015 periplasmic binding protein YP_004127919.1 KEGG: dia:Dtpsy_1014 cobalbumin biosynthesis protein; PFAM: cobalbumin biosynthesis protein YP_004127920.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: dia:Dtpsy_1013 CobB/CobQ domain protein glutamine amidotransferase YP_004127921.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: aav:Aave_1537 TonB-dependent receptor YP_004127922.1 KEGG: ajs:Ajs_1095 hypothetical protein YP_004127923.1 PFAM: protein of unknown function DUF710; KEGG: dia:Dtpsy_1010 protein of unknown function DUF710 YP_004127924.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: dac:Daci_2786 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004127925.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: aav:Aave_1533 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004127926.1 KEGG: ajs:Ajs_1093 hypothetical protein YP_004127927.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: dia:Dtpsy_1008 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004127928.1 KEGG: ajs:Ajs_1091 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_004127929.1 KEGG: dia:Dtpsy_1006 hypothetical protein YP_004127930.1 KEGG: dia:Dtpsy_1005 hypothetical protein YP_004127931.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG YP_004127932.1 KEGG: ajs:Ajs_1087 cytochrome c oxidase, cbb3-type, subunit III; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I YP_004127933.1 KEGG: dia:Dtpsy_1002 Cbb3-type cytochrome oxidase component YP_004127934.1 KEGG: dia:Dtpsy_1001 cbb3-type cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO YP_004127935.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; KEGG: dia:Dtpsy_1000 cbb3-type cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I YP_004127936.1 KEGG: dia:Dtpsy_0999 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type YP_004127937.1 KEGG: dia:Dtpsy_0998 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004127938.1 PFAM: UspA domain-containing protein; KEGG: dia:Dtpsy_0997 UspA domain protein YP_004127939.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dia:Dtpsy_0996 malonyl-CoA synthase YP_004127940.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_1079 enoyl-CoA hydratase/isomerase YP_004127941.1 KEGG: dia:Dtpsy_0994 hypothetical protein YP_004127942.1 KEGG: ajs:Ajs_1077 malonyl-CoA decarboxylase; PFAM: Malonyl-CoA decarboxylase YP_004127943.1 KEGG: dia:Dtpsy_0992 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004127944.1 KEGG: dia:Dtpsy_0991 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_004127945.1 KEGG: dia:Dtpsy_0990 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein YP_004127946.1 PFAM: thioesterase superfamily protein; KEGG: dia:Dtpsy_0989 thioesterase superfamily protein YP_004127947.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: dia:Dtpsy_0988 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004127948.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: dia:Dtpsy_0987 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004127949.1 KEGG: dia:Dtpsy_0986 hypothetical protein YP_004127950.1 PFAM: cytochrome c class I; KEGG: dia:Dtpsy_0985 cytochrome c class I YP_004127951.1 TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: dia:Dtpsy_2754 lipoprotein releasing system, ATP-binding protein; SMART: AAA ATPase YP_004127952.1 KEGG: dia:Dtpsy_2755 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_004127953.1 PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; KEGG: dia:Dtpsy_2757 hypothetical protein YP_004127954.1 KEGG: ajs:Ajs_3424 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_004127955.1 KEGG: dia:Dtpsy_2762 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004127956.1 manually curated; PFAM: PHP domain protein; KEGG: dia:Dtpsy_2763 PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004127957.1 KEGG: dia:Dtpsy_2764 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_004127958.1 KEGG: dac:Daci_5413 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_004127959.1 PFAM: peptidase M50; KEGG: dia:Dtpsy_2770 peptidase M50 YP_004127960.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: dia:Dtpsy_2771 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004127961.1 KEGG: ctt:CtCNB1_0831 two component transcriptional regulator, winged; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004127962.1 KEGG: dac:Daci_5417 peptidoglycan-binding LysM; PFAM: FecR protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004127963.1 KEGG: dac:Daci_5418 histidine kinase; PFAM: CHASE2 domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004127964.1 TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rfr:Rfer_0702 undecaprenyl-phosphate galactosephosphotransferase; PFAM: sugar transferase YP_004127965.1 KEGG: rfr:Rfer_0701 hypothetical protein YP_004127966.1 KEGG: dac:Daci_5376 hypothetical protein YP_004127967.1 TIGRFAM: seryl-tRNA synthetase; KEGG: dia:Dtpsy_2772 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_004127968.1 KEGG: aav:Aave_3769 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004127969.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: ajs:Ajs_3447 hypothetical protein YP_004127970.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: ajs:Ajs_3448 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_004127971.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dia:Dtpsy_2776 peptidylprolyl isomerase FKBP-type YP_004127972.1 KEGG: ajs:Ajs_3450 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004127973.1 KEGG: dia:Dtpsy_2778 hypothetical protein YP_004127974.1 KEGG: dia:Dtpsy_2779 Smr protein/MutS2; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_004127975.1 KEGG: reu:Reut_B4844 hypothetical protein YP_004127976.1 KEGG: reu:Reut_B4843 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein YP_004127977.1 KEGG: reu:Reut_B4842 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004127978.1 PFAM: isocitrate lyase and phosphorylmutase; KEGG: reu:Reut_B4841 2,3-dimethylmalate lyase YP_004127979.1 KEGG: reu:Reut_B4840 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004127980.1 PFAM: globin; KEGG: ajs:Ajs_3454 globin YP_004127981.1 KEGG: dia:Dtpsy_2782 transcriptional regulator, TraR/DksA family YP_004127982.1 KEGG: ajs:Ajs_3456 hypothetical protein YP_004127983.1 KEGG: dia:Dtpsy_2784 hypothetical protein YP_004127984.1 PFAM: protein of unknown function DUF214; KEGG: dia:Dtpsy_2785 protein of unknown function DUF214 YP_004127985.1 PFAM: formate dehydrogenase subunit FdhD; KEGG: dia:Dtpsy_2786 formate dehydrogenase subunit FdhD YP_004127986.1 KEGG: dia:Dtpsy_2787 hypothetical protein YP_004127987.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: ajs:Ajs_3461 formate dehydrogenase gamma subunit YP_004127988.1 KEGG: dia:Dtpsy_2789 lipoprotein YP_004127989.1 KEGG: dia:Dtpsy_2790 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004127990.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: dia:Dtpsy_2791 molybdopterin oxidoreductase YP_004127991.1 TIGRFAM: formate dehydrogenase region TAT target; KEGG: dia:Dtpsy_2792 formate dehydrogenase region TAT target YP_004127992.1 KEGG: dia:Dtpsy_2793 cytoplasmic chaperone TorD family protein YP_004127993.1 manually curated; KEGG: ajs:Ajs_3467 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004127994.1 KEGG: ajs:Ajs_3468 hypothetical protein YP_004127995.1 KEGG: dia:Dtpsy_2796 hypothetical protein YP_004127996.1 KEGG: dia:Dtpsy_2797 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; molydopterin dinucleotide-binding region YP_004127997.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: dia:Dtpsy_2798 respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_004127998.1 PFAM: HpcH/HpaI aldolase; KEGG: bpy:Bphyt_0618 citrate (pro-3S)-lyase YP_004127999.1 PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_4176 major facilitator transporter YP_004128000.1 KEGG: bpt:Bpet0853 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH YP_004128001.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpt:Bpet0852 hypothetical protein YP_004128002.1 KEGG: bpt:Bpet0851 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein YP_004128003.1 PFAM: MmgE/PrpD family protein; KEGG: bpt:Bpet0850 hypothetical protein YP_004128004.1 KEGG: vap:Vapar_0801 hypothetical protein YP_004128005.1 PFAM: MaoC domain protein dehydratase; KEGG: bpt:Bpet0844 hypothetical protein YP_004128006.1 PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: ajs:Ajs_3476 hypothetical protein YP_004128007.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: dia:Dtpsy_2801 C4-dicarboxylate transporter/malic acid transport protein YP_004128008.1 KEGG: ajs:Ajs_3479 selenophosphate synthase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004128009.1 KEGG: dia:Dtpsy_2803 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein YP_004128010.1 PFAM: restriction endonuclease; KEGG: dia:Dtpsy_2804 restriction endonuclease YP_004128011.1 PFAM: Patatin; KEGG: dia:Dtpsy_2805 patatin YP_004128012.1 KEGG: dia:Dtpsy_2806 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein YP_004128013.1 KEGG: dac:Daci_1842 hypothetical protein YP_004128014.1 KEGG: tmz:Tmz1t_0986 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004128015.1 KEGG: dac:Daci_3710 benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein YP_004128016.1 PFAM: alanine racemase domain protein; KEGG: dac:Daci_3709 alanine racemase domain-containing protein YP_004128017.1 PFAM: glutamine amidotransferase class-I; KEGG: tmz:Tmz1t_0983 glutamine amidotransferase YP_004128018.1 KEGG: ajs:Ajs_3485 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; helix-turn-helix Fis-type; SMART: Helix-turn-helix, AraC domain YP_004128019.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dia:Dtpsy_2809 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004128020.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ajs:Ajs_3487 FMN-dependent alpha-hydroxy acid dehydrogenase YP_004128021.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: ajs:Ajs_3488 hypothetical protein YP_004128022.1 KEGG: dac:Daci_1840 lipoprotein YP_004128023.1 KEGG: ajs:Ajs_3491 hypothetical protein YP_004128024.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: ajs:Ajs_3492 condensin subunit ScpA YP_004128025.1 KEGG: sml:Smlt2675 carboxymuconolactone decarboxylase family protein; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004128026.1 KEGG: reh:H16_A1911 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004128027.1 KEGG: vei:Veis_1080 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004128028.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: dia:Dtpsy_2818 5-carboxymethyl-2-hydroxymuconate isomerase YP_004128029.1 KEGG: ajs:Ajs_3496 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV YP_004128030.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: dia:Dtpsy_2820 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_004128031.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: dia:Dtpsy_2821 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004128032.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: dia:Dtpsy_2822 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_004128033.1 KEGG: ajs:Ajs_3500 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_004128034.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB0990 LysR family transcriptional regulator YP_004128035.1 KEGG: bpa:BPP0896 hypothetical protein YP_004128036.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bbr:BB0988 hypothetical protein YP_004128037.1 PFAM: protein of unknown function DUF81; KEGG: bpa:BPP0894 hypothetical protein YP_004128038.1 KEGG: bpa:BPP0893 hypothetical protein YP_004128039.1 KEGG: pna:Pnap_3576 hypothetical protein YP_004128040.1 KEGG: ajs:Ajs_3501 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; manually curated; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_004128041.1 KEGG: dia:Dtpsy_2825 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_004128042.1 KEGG: dia:Dtpsy_2826 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin YP_004128043.1 KEGG: dia:Dtpsy_2827 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004128044.1 TIGRFAM: phosphoglycerate mutase 1 family; KEGG: ajs:Ajs_3505 phosphoglyceromutase; PFAM: Phosphoglycerate mutase YP_004128045.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: ajs:Ajs_3506 C-terminal processing peptidase-3; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_004128046.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: ajs:Ajs_3507 UBA/ThiF-type NAD/FAD binding protein YP_004128047.1 KEGG: dia:Dtpsy_2831 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004128048.1 KEGG: dia:Dtpsy_2832 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004128049.1 KEGG: ajs:Ajs_3510 multi-sensor signal transduction histidine kinase; PFAM: CHASE3 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004128050.1 PFAM: protein of unknown function DUF1328; KEGG: dia:Dtpsy_2834 hypothetical protein YP_004128051.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: dia:Dtpsy_2835 hypothetical protein YP_004128052.1 KEGG: dia:Dtpsy_2837 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004128053.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: dia:Dtpsy_2839 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_004128054.1 TIGRFAM: methyltransferase; KEGG: dia:Dtpsy_2840 methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_004128055.1 KEGG: dia:Dtpsy_2841 peptidase M16 domain protein; manually curated; PFAM: peptidase M16 domain protein YP_004128056.1 PFAM: peptidase M16 domain protein; KEGG: dia:Dtpsy_2842 peptidase M16 domain protein YP_004128057.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: dia:Dtpsy_2843 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_004128058.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_1392 LysR family transcriptional regulator YP_004128059.1 PFAM: dihydrodipicolinate synthetase; KEGG: dac:Daci_3342 dihydrodipicolinate synthetase YP_004128060.1 KEGG: dac:Daci_3341 hypothetical protein YP_004128061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_5678 short-chain dehydrogenase/reductase SDR YP_004128062.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dac:Daci_3339 mandelate racemase/muconate lactonizing protein YP_004128063.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: dia:Dtpsy_2844 CutA1 divalent ion tolerance protein YP_004128064.1 KEGG: dac:Daci_4557 hypothetical protein YP_004128065.1 KEGG: vap:Vapar_6186 hypothetical protein YP_004128066.1 PFAM: aconitate hydratase domain-containing protein; KEGG: dac:Daci_4555 aconitate hydratase YP_004128067.1 KEGG: dac:Daci_4554 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004128068.1 KEGG: dac:Daci_4553 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004128069.1 KEGG: dac:Daci_4552 hemagglutinin-related protein YP_004128070.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rpa:RPA3655 alcohol dehydrogenase YP_004128071.1 KEGG: pol:Bpro_1513 hydratase/decarboxylase YP_004128072.1 KEGG: dac:Daci_2714 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004128073.1 manually curated; PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: dac:Daci_2713 histidine kinase; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004128074.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: dac:Daci_2712 hypothetical protein YP_004128075.1 manually curated; KEGG: dac:Daci_2711 cytochrome b561 YP_004128076.1 KEGG: dac:Daci_2710 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004128077.1 KEGG: dac:Daci_2709 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_004128078.1 KEGG: dac:Daci_2708 hypothetical protein YP_004128079.1 KEGG: dac:Daci_2707 outer membrane efflux protein YP_004128080.1 KEGG: dba:Dbac_1405 ABC transporter related YP_004128081.1 KEGG: dia:Dtpsy_2845 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_004128082.1 KEGG: dia:Dtpsy_2846 hypothetical protein YP_004128083.1 PFAM: electron transport protein SCO1/SenC; KEGG: dia:Dtpsy_2849 electron transport protein SCO1/SenC YP_004128084.1 KEGG: dia:Dtpsy_2850 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004128085.1 PFAM: cytochrome oxidase assembly; KEGG: ajs:Ajs_3528 cytochrome oxidase assembly YP_004128086.1 KEGG: ajs:Ajs_3529 hypothetical protein YP_004128087.1 KEGG: dia:Dtpsy_2853 transmembrane cytochrome oxidase YP_004128088.1 KEGG: ajs:Ajs_3531 transmembrane protein YP_004128089.1 PFAM: cytochrome c oxidase subunit III; KEGG: dia:Dtpsy_2855 cytochrome c oxidase subunit III YP_004128090.1 KEGG: dia:Dtpsy_2856 hypothetical protein YP_004128091.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: dia:Dtpsy_2857 cytochrome c oxidase assembly protein YP_004128092.1 KEGG: vap:Vapar_4390 hypothetical protein YP_004128093.1 KEGG: ajs:Ajs_3536 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_004128094.1 KEGG: dia:Dtpsy_2860 cytochrome c oxidase, subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I YP_004128095.1 KEGG: ajs:Ajs_3539 biotin synthesis protein BioC YP_004128096.1 PFAM: phosphoribosyltransferase; KEGG: ajs:Ajs_3540 ComF family protein YP_004128097.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dia:Dtpsy_2864 tRNA/rRNA methyltransferase (SpoU) YP_004128098.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_3911 LysR family transcriptional regulator YP_004128099.1 KEGG: aav:Aave_3912 hypothetical protein YP_004128100.1 KEGG: dia:Dtpsy_2866 cobyrinic acid ac-diamide synthase YP_004128101.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3544 lysine exporter protein LysE/YggA YP_004128102.1 KEGG: dia:Dtpsy_2868 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_004128103.1 KEGG: mav:MAV_1744 transcriptional regulator, GntR family protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004128104.1 PFAM: isocitrate lyase and phosphorylmutase; KEGG: cak:Caul_0509 carboxyvinyl-carboxyphosphonate phosphorylmutase YP_004128105.1 KEGG: bja:bll0416 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_004128106.1 KEGG: cak:Caul_0508 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004128107.1 KEGG: pol:Bpro_2294 hypothetical protein YP_004128108.1 PFAM: protein of unknown function DUF453; KEGG: cak:Caul_0497 hypothetical protein YP_004128109.1 PFAM: MmgE/PrpD family protein; KEGG: vei:Veis_4268 MmgE/PrpD family protein YP_004128110.1 KEGG: vap:Vapar_4085 hypothetical protein YP_004128111.1 KEGG: vap:Vapar_4972 hypothetical protein YP_004128112.1 TIGRFAM: amidohydrolase; KEGG: bph:Bphy_3769 amidohydrolase; PFAM: peptidase M20 YP_004128113.1 KEGG: bpt:Bpet0051 secreted protein YP_004128114.1 PFAM: LysR substrate-binding; KEGG: rec:RHECIAT_CH0001484 transcriptional regulator protein, LysR family YP_004128115.1 KEGG: dia:Dtpsy_2869 hypothetical protein YP_004128116.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_3940 short-chain dehydrogenase/reductase SDR YP_004128117.1 TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; KEGG: dac:Daci_5563 beta-ketoadipyl CoA thiolase; PFAM: Thiolase-like YP_004128118.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: dia:Dtpsy_2872 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_004128119.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: dia:Dtpsy_2873 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_004128120.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; KEGG: dia:Dtpsy_2874 transcriptional regulator, IclR family; SMART: regulatory protein IclR YP_004128121.1 PFAM: Domain of unknown function DUF1841; KEGG: ajs:Ajs_3553 hypothetical protein YP_004128122.1 PFAM: UspA domain-containing protein; KEGG: ajs:Ajs_3554 UspA domain-containing protein YP_004128123.1 PFAM: cytochrome c class I; KEGG: dia:Dtpsy_2878 cytochrome c class I YP_004128124.1 KEGG: ajs:Ajs_3556 ATPase central domain-containing protein; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_004128125.1 KEGG: dia:Dtpsy_2881 GCN5-related N-acetyltransferase YP_004128126.1 KEGG: cti:RALTA_B1738 conserved hypothetical protein; UPF0065 YP_004128127.1 KEGG: bpy:Bphyt_0617 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH YP_004128128.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: sti:Sthe_3003 formyl-CoA transferase YP_004128129.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: sti:Sthe_1794 acyl-CoA dehydrogenase domain protein YP_004128130.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pzu:PHZ_c3022 enoyl-CoA hydratase/isomerase family protein YP_004128131.1 PFAM: MmgE/PrpD family protein; KEGG: nmg:Nmag_3457 MmgE/PrpD family protein YP_004128132.1 KEGG: ajs:Ajs_3559 hypothetical protein YP_004128133.1 PFAM: surface antigen (D15); KEGG: dia:Dtpsy_2883 surface antigen (D15) YP_004128134.1 PFAM: protein of unknown function DUF490; KEGG: ajs:Ajs_3561 hypothetical protein YP_004128135.1 KEGG: sdn:Sden_0296 hypothetical protein YP_004128136.1 KEGG: sbi:SORBI_03g042340 hypothetical protein YP_004128137.1 KEGG: rpf:Rpic12D_4805 hypothetical protein YP_004128138.1 KEGG: vei:Veis_3760 hypothetical protein YP_004128139.1 KEGG: dhd:Dhaf_3041 excinuclease ABC subunit C YP_004128140.1 KEGG: dac:Daci_3452 lysozyme YP_004128141.1 KEGG: ana:all0634 hypothetical protein YP_004128142.1 KEGG: mav:MAV_0791 hypothetical protein YP_004128143.1 KEGG: cel:Y25C1A.3 C-type LECtin YP_004128144.1 KEGG: nml:Namu_4228 conserved repeat domain protein YP_004128145.1 KEGG: cph:Cpha266_1609 hypothetical protein YP_004128146.1 KEGG: nmg:Nmag_3292 Cna B domain protein YP_004128147.1 KEGG: cre:CHLREDRAFT_167270 hypothetical protein YP_004128148.1 KEGG: pna:Pnap_2248 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_004128149.1 KEGG: hth:HTH_0895 hypothetical protein YP_004128150.1 KEGG: pna:Pnap_2250 hypothetical protein YP_004128151.1 KEGG: pna:Pnap_2251 hypothetical protein YP_004128152.1 KEGG: mes:Meso_1217 phage protein GP20 YP_004128153.1 KEGG: xal:XALc_0211 hypothetical protein YP_004128154.1 PFAM: peptidase S49; KEGG: met:M446_4143 peptidase S49 YP_004128155.1 KEGG: lhk:LHK_01658 phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda YP_004128156.1 KEGG: sus:Acid_3400 hypothetical protein YP_004128157.1 KEGG: hmg:100211620 similar to H28G03.4 YP_004128158.1 PFAM: terminase GpA; KEGG: dac:Daci_4687 terminase GpA YP_004128159.1 PFAM: DNA packaging Nu1; KEGG: dac:Daci_4688 hypothetical protein YP_004128161.1 KEGG: bph:Bphy_1886 hypothetical protein YP_004128162.1 KEGG: bpt:Bpet0970 hypothetical protein YP_004128163.1 KEGG: apt:APA01_05090 hypothetical protein YP_004128164.1 KEGG: bvu:BVU_2841 hypothetical protein YP_004128165.1 KEGG: hiq:CGSHiGG_04860 hypothetical protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_004128166.1 KEGG: aav:Aave_1760 hypothetical protein YP_004128167.1 KEGG: pna:Pnap_2259 hypothetical protein YP_004128168.1 KEGG: pna:Pnap_2262 hypothetical protein YP_004128169.1 KEGG: pzu:PHZ_c1002 competence-damaged inducible protein YP_004128170.1 KEGG: act:ACLA_020300 Hsp70 family chaperone Lhs1/Orp150, putative YP_004128171.1 manually curated; KEGG: pfl:PFL_2126 Cro/CI family transcriptional regulator YP_004128172.1 KEGG: sbn:Sbal195_0751 hypothetical protein YP_004128173.1 PFAM: Protein of unknown function DUF2511; KEGG: pna:Pnap_2266 hypothetical protein YP_004128174.1 KEGG: mva:Mvan_4791 OsmC family protein YP_004128175.1 KEGG: tbi:Tbis_2085 LuxR family ATP-dependent transcriptional regulator YP_004128176.1 KEGG: xfn:XfasM23_1198 hypothetical protein YP_004128177.1 KEGG: cyc:PCC7424_3069 transcriptional regulator, XRE family YP_004128178.1 KEGG: mag:amb1496 hypothetical protein YP_004128179.1 KEGG: rpi:Rpic_2348 hypothetical protein YP_004128180.1 KEGG: fal:FRAAL1878 hypothetical protein YP_004128181.1 KEGG: msm:MSMEG_0978 aminotransferase, class V superfamily protein YP_004128182.1 KEGG: ypy:YPK_1206 hypothetical protein YP_004128183.1 PFAM: Protein of unknown function DUF2303; KEGG: nhl:Nhal_0958 hypothetical protein YP_004128184.1 KEGG: pna:Pnap_2272 hypothetical protein YP_004128185.1 KEGG: nhl:Nhal_0985 hypothetical protein YP_004128186.1 KEGG: met:M446_4802 helicase domain-containing protein YP_004128187.1 KEGG: aav:Aave_1670 hypothetical protein YP_004128188.1 KEGG: pna:Pnap_3326 hypothetical protein YP_004128189.1 KEGG: rpi:Rpic_2348 hypothetical protein YP_004128190.1 KEGG: bgl:bglu_1g15260 hypothetical protein YP_004128191.1 KEGG: slt:Slit_0203 retron-type reverse transcriptase YP_004128192.1 PFAM: Gp37Gp68 family protein; KEGG: bpm:BURPS1710b_1658 GP38 YP_004128193.1 KEGG: ppp:PHYPADRAFT_20818 hypothetical protein YP_004128194.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: aav:Aave_1680 C-5 cytosine-specific DNA methylase YP_004128196.1 KEGG: bpy:Bphyt_1156 hypothetical protein YP_004128197.1 PFAM: integrase family protein; KEGG: eba:ebA29 phage integrase YP_004128198.1 KEGG: ngr:NAEGRDRAFT_75750 hypothetical protein YP_004128199.1 KEGG: dsy:DSY3857 hypothetical protein YP_004128201.1 KEGG: rbe:RBE_0670 hypothetical protein YP_004128202.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: bte:BTH_I2733 helix-turn-helix domain-containing protein; SMART: helix-turn-helix domain protein YP_004128203.1 KEGG: cpi:Cpin_2216 hypothetical protein YP_004128204.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: rpi:Rpic_0452 relaxase/mobilization nuclease family protein YP_004128205.1 manually curated; KEGG: bid:Bind_0669 hypothetical protein YP_004128206.1 KEGG: sit:TM1040_1587 DNA adenine methylase Dam; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_004128207.1 KEGG: mgm:Mmc1_1280 hypothetical protein YP_004128208.1 PFAM: integrase family protein; KEGG: mms:mma_2533 phage integrase/recombinase YP_004128209.1 KEGG: avn:Avin_00950 cytochrome oxidase assembly protein YP_004128210.1 KEGG: mag:amb2220 hypothetical protein YP_004128211.1 PFAM: cytochrome c oxidase subunit II; KEGG: app:CAP2UW1_1791 cytochrome c oxidase subunit II YP_004128212.1 KEGG: app:CAP2UW1_1790 cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I YP_004128213.1 KEGG: app:CAP2UW1_1789 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004128214.1 PFAM: Redoxin domain protein; KEGG: app:CAP2UW1_1788 electron transport protein SCO1/SenC YP_004128215.1 PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: app:CAP2UW1_1327 methyl-viologen-reducing hydrogenase delta subunit YP_004128216.1 KEGG: app:CAP2UW1_1325 hypothetical protein YP_004128217.1 KEGG: app:CAP2UW1_3424 cytochrome c oxidase, subunit I YP_004128218.1 PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; Cytochrome b/b6 domain; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein YP_004128219.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_3563 cardiolipin synthetase 2 YP_004128220.1 KEGG: aav:Aave_3963 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004128221.1 KEGG: vap:Vapar_2384 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004128222.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: aav:Aave_3965 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004128223.1 KEGG: ajs:Ajs_3564 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_004128224.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_3565 binding-protein-dependent transport systems inner membrane component YP_004128225.1 KEGG: ajs:Ajs_3566 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004128226.1 KEGG: dia:Dtpsy_2891 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004128227.1 PFAM: amidohydrolase; KEGG: dia:Dtpsy_2892 amidohydrolase YP_004128228.1 KEGG: dia:Dtpsy_2893 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_004128229.1 KEGG: dia:Dtpsy_2894 phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004128230.1 KEGG: dia:Dtpsy_2895 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_004128231.1 KEGG: dia:Dtpsy_2896 protein of unknown function DUF179; manually curated; PFAM: protein of unknown function DUF179 YP_004128232.1 KEGG: dia:Dtpsy_2897 CheA signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein YP_004128233.1 KEGG: dia:Dtpsy_2898 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004128234.1 KEGG: ajs:Ajs_3576 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004128235.1 KEGG: dia:Dtpsy_2900 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004128236.1 KEGG: aav:Aave_0901 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004128237.1 KEGG: dia:Dtpsy_2902 rubredoxin-type Fe(Cys)4 protein; manually curated; PFAM: Rubredoxin-type Fe(Cys)4 protein YP_004128238.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: dia:Dtpsy_2903 phosphomethylpyrimidine kinase type-1 YP_004128239.1 KEGG: dia:Dtpsy_2904 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_004128240.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: dia:Dtpsy_2907 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_004128241.1 PFAM: helix-turn-helix Fis-type; KEGG: dia:Dtpsy_2908 transcriptional regulator, fis family YP_004128242.1 KEGG: dia:Dtpsy_2909 TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_004128243.1 KEGG: dia:Dtpsy_2910 hypothetical protein YP_004128244.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dia:Dtpsy_2911 transcriptional regulator, LysR family YP_004128245.1 KEGG: dia:Dtpsy_2912 hypothetical protein YP_004128246.1 KEGG: dia:Dtpsy_2913 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein YP_004128247.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: dia:Dtpsy_2745 protein of unknown function DUF112 transmembrane YP_004128248.1 KEGG: vap:Vapar_0318 protein of unknown function DUF1468 YP_004128249.1 KEGG: mms:mma_0288 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004128250.1 KEGG: bpt:Bpet1596 two-component transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; response regulator receiver; SMART: response regulator receiver YP_004128251.1 KEGG: dia:Dtpsy_2928 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_004128252.1 KEGG: ajs:Ajs_3620 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase YP_004128253.1 PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: ajs:Ajs_3621 thiol:disulfide interchange protein DsbC YP_004128254.1 PFAM: peptidase M61 domain protein; KEGG: ajs:Ajs_3622 peptidase M61 domain-containing protein YP_004128255.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3623 short chain enoyl-CoA hydratase YP_004128256.1 KEGG: aav:Aave_0876 hypothetical protein YP_004128257.1 TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: dia:Dtpsy_2935 (dimethylallyl)adenosine tRNA methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB YP_004128258.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: ajs:Ajs_3626 signal recognition particle subunit FFH/SRP54 (SRP54); SMART: AAA ATPase YP_004128259.1 PFAM: cytochrome c assembly protein; KEGG: dia:Dtpsy_2937 cytochrome c assembly protein YP_004128260.1 KEGG: dia:Dtpsy_2938 hypothetical protein YP_004128261.1 KEGG: dia:Dtpsy_2939 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004128262.1 KEGG: dia:Dtpsy_2940 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004128263.1 KEGG: dia:Dtpsy_2941 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_004128264.1 KEGG: ajs:Ajs_3632 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein YP_004128265.1 KEGG: dia:Dtpsy_2943 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_004128266.1 KEGG: dia:Dtpsy_2944 histone protein YP_004128267.1 PFAM: PfkB domain protein; KEGG: dia:Dtpsy_2945 PfkB domain protein YP_004128268.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: dia:Dtpsy_2946 MJ0042 family finger-like protein YP_004128269.1 KEGG: ajs:Ajs_3637 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_004128270.1 KEGG: ajs:Ajs_3638 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004128271.1 KEGG: dia:Dtpsy_2949 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004128272.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dia:Dtpsy_2950 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004128273.1 KEGG: ajs:Ajs_3641 hypothetical protein YP_004128274.1 manually curated; TIGRFAM: UDP-N-acetylmuramate; KEGG: ajs:Ajs_3642 UDP-N-acetylmuramate; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004128275.1 KEGG: dia:Dtpsy_2953 hypothetical protein YP_004128276.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: dia:Dtpsy_2954 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004128277.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: dia:Dtpsy_2956 peptidase U62 modulator of DNA gyrase YP_004128278.1 KEGG: dia:Dtpsy_2957 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_004128279.1 PFAM: protein of unknown function UPF0227; KEGG: ajs:Ajs_3649 hypothetical protein YP_004128280.1 PFAM: O-antigen polymerase; KEGG: dia:Dtpsy_2960 O-antigen polymerase YP_004128281.1 PFAM: cytochrome c class I; KEGG: dia:Dtpsy_2961 cytochrome c class I YP_004128282.1 KEGG: ajs:Ajs_3652 hypothetical protein YP_004128283.1 KEGG: dia:Dtpsy_2963 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004128284.1 PFAM: ribonuclease II; KEGG: ajs:Ajs_3654 ribonuclease II YP_004128285.1 TIGRFAM: TonB family protein; KEGG: ajs:Ajs_3655 TonB family protein YP_004128286.1 KEGG: ajs:Ajs_3656 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_004128287.1 KEGG: ajs:Ajs_3657 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_004128288.1 KEGG: rso:RSc1775 hemagglutinin-related protein YP_004128289.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_3784 integrase catalytic subunit YP_004128290.1 PFAM: transposase IS3/IS911 family protein; KEGG: ctt:CtCNB1_1899 transposase IS3/IS911 YP_004128291.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: dia:Dtpsy_2968 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_004128292.1 PFAM: helix-turn-helix HxlR type; KEGG: mlo:mlr1855 hypothetical protein YP_004128293.1 PFAM: Methyltransferase type 11; KEGG: acp:A2cp1_1683 methyltransferase type 11 YP_004128294.1 KEGG: dia:Dtpsy_2971 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_004128295.1 KEGG: dia:Dtpsy_2972 hypothetical protein YP_004128296.1 KEGG: dia:Dtpsy_2973 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_004128297.1 KEGG: bav:BAV0211 IclR-family transcriptional regulator; PFAM: regulatory protein IclR; SMART: regulatory protein IclR YP_004128298.1 KEGG: aav:Aave_3942 hypothetical protein YP_004128299.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bpt:Bpet0794 acyl-CoA synthetase YP_004128300.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB4035 oxidoreductase YP_004128301.1 PFAM: Extracellular ligand-binding receptor; KEGG: reu:Reut_B3887 UreA/short-chain amide ABC transporter YP_004128302.1 KEGG: bav:BAV0225 exported protein YP_004128303.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bav:BAV0226 acyl-CoA dehydrogenase YP_004128304.1 KEGG: dia:Dtpsy_2975 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_004128305.1 KEGG: dia:Dtpsy_2976 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_004128306.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: dia:Dtpsy_2977 cell division protein FtsQ YP_004128307.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: ajs:Ajs_3668 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_004128308.1 KEGG: dia:Dtpsy_2979 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_004128309.1 KEGG: aav:Aave_0821 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28 YP_004128310.1 KEGG: ajs:Ajs_3671 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_004128311.1 KEGG: dia:Dtpsy_2982 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004128312.1 KEGG: dia:Dtpsy_2983 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004128313.1 KEGG: ajs:Ajs_3674 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004128314.1 KEGG: dia:Dtpsy_2985 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004128315.1 KEGG: dia:Dtpsy_2986 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004128316.1 KEGG: aav:Aave_0814 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL YP_004128317.1 KEGG: dia:Dtpsy_2988 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_004128318.1 KEGG: dia:Dtpsy_2989 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_004128319.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: dia:Dtpsy_2990 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase YP_004128320.1 PFAM: 20S proteasome A and B subunits; KEGG: dia:Dtpsy_2991 ATP-dependent protease peptidase subunit YP_004128321.1 KEGG: dia:Dtpsy_2992 hypothetical protein YP_004128322.1 TIGRFAM: RNA polymerase-binding protein DksA; KEGG: dia:Dtpsy_2993 transcriptional regulator, TraR/DksA family YP_004128323.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dia:Dtpsy_2994 cobalamin synthesis protein P47K YP_004128324.1 KEGG: dac:Daci_1875 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004128325.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: response regulator receiver; regulatory protein MerR; KEGG: dac:Daci_1874 response regulator receiver protein; SMART: response regulator receiver YP_004128326.1 KEGG: ctt:CtCNB1_1998 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004128327.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: response regulator receiver; regulatory protein MerR; KEGG: aav:Aave_2239 response regulator receiver protein; SMART: response regulator receiver YP_004128328.1 KEGG: lch:Lcho_0734 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004128329.1 KEGG: dac:Daci_0737 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004128330.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: dac:Daci_0735 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein YP_004128331.1 KEGG: lch:Lcho_4371 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004128332.1 KEGG: rfr:Rfer_1480 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004128333.1 KEGG: dia:Dtpsy_2996 tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004128334.1 PFAM: protein of unknown function DUF484; KEGG: dia:Dtpsy_2997 protein of unknown function DUF484 YP_004128335.1 KEGG: dia:Dtpsy_2998 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004128336.1 PFAM: NUDIX hydrolase; KEGG: dia:Dtpsy_3001 beta-lactamase domain protein YP_004128337.1 KEGG: dia:Dtpsy_3002 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004128338.1 KEGG: ajs:Ajs_3722 hypothetical protein YP_004128339.1 KEGG: dac:Daci_1442 cysteine synthase; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004128340.1 PFAM: heat shock protein DnaJ domain protein; KEGG: bvi:Bcep1808_3882 heat shock protein DnaJ domain-containing protein YP_004128341.1 PFAM: FAD dependent oxidoreductase; KEGG: dia:Dtpsy_3010 FAD dependent oxidoreductase YP_004128342.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: dac:Daci_0909 carboxymuconolactone decarboxylase YP_004128343.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_3510 LysR family transcriptional regulator YP_004128344.1 KEGG: dac:Daci_3511 citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase YP_004128345.1 KEGG: dac:Daci_3512 hypothetical protein YP_004128346.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: dac:Daci_3513 L-carnitine dehydratase/bile acid-inducible protein F YP_004128347.1 KEGG: dac:Daci_3514 amidohydrolase 2; manually curated; PFAM: amidohydrolase 2 YP_004128348.1 KEGG: dac:Daci_3515 hypothetical protein YP_004128349.1 KEGG: cti:RALTA_B1490 transcriptional activator of cyclohexanecarboxylate anaerobic degradation; MarR type; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004128350.1 KEGG: lch:Lcho_1185 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_004128351.1 KEGG: vei:Veis_4105 enoyl-CoA hydratase/isomerase; TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase YP_004128352.1 KEGG: lch:Lcho_1187 cyclohexanecarboxyl-CoA dehydrogenase; TIGRFAM: cyclohexanecarboxyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein YP_004128353.1 KEGG: pna:Pnap_2126 cyclohexanecarboxylate-CoA ligase; TIGRFAM: cyclohexanecarboxylate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004128354.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit YP_004128355.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit YP_004128356.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_3732 2-nitropropane dioxygenase, NPD YP_004128357.1 KEGG: dac:Daci_1400 hypothetical protein YP_004128358.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_3734 L-carnitine dehydratase/bile acid-inducible protein F YP_004128359.1 PFAM: thioesterase superfamily protein; KEGG: mrb:Mrub_0164 thioesterase superfamily protein YP_004128360.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dia:Dtpsy_3016 enoyl-CoA hydratase YP_004128361.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dac:Daci_1396 acyl-CoA dehydrogenase domain-containing protein YP_004128362.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_3737 acyl-CoA dehydrogenase domain-containing protein YP_004128363.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: dia:Dtpsy_3019 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004128364.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: dac:Daci_1393 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_004128365.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_1392 LysR family transcriptional regulator YP_004128366.1 KEGG: bpe:BP0072 transposase YP_004128367.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein YP_004128368.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit YP_004128369.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_3784 integrase catalytic subunit YP_004128370.1 PFAM: transposase IS3/IS911 family protein; KEGG: ctt:CtCNB1_1899 transposase IS3/IS911 YP_004128371.1 KEGG: vap:Vapar_6180 glyoxalase/bleomycin resistance protein/dioxygenase YP_004128372.1 KEGG: dia:Dtpsy_2523 transposase IS66 YP_004128373.1 PFAM: IS66 Orf2 family protein; KEGG: rfr:Rfer_2710 IS66 Orf2 like YP_004128374.1 PFAM: transposase IS3/IS911 family protein; KEGG: rfr:Rfer_2709 transposase IS3/IS911 YP_004128375.1 PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_3742 heat shock protein HtpX YP_004128376.1 KEGG: ajs:Ajs_3743 transmembrane protein YP_004128377.1 TIGRFAM: dihydroorotase, homodimeric type; KEGG: dia:Dtpsy_3026 dihydroorotase; PFAM: amidohydrolase YP_004128378.1 PFAM: protein of unknown function DUF488; KEGG: rfr:Rfer_4130 hypothetical protein YP_004128379.1 KEGG: ote:Oter_3729 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004128380.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: ajs:Ajs_3747 UvrA family protein; SMART: AAA ATPase YP_004128381.1 PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_3029 extracellular ligand-binding receptor YP_004128382.1 KEGG: ajs:Ajs_3750 hypothetical protein YP_004128383.1 KEGG: ajs:Ajs_3751 porin YP_004128384.1 KEGG: ajs:Ajs_3752 major facilitator superfamily transporter YP_004128385.1 PFAM: protein of unknown function DUF485; KEGG: dac:Daci_5956 hypothetical protein YP_004128386.1 KEGG: rpf:Rpic12D_0449 SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004128387.1 KEGG: pna:Pnap_0481 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004128388.1 KEGG: dac:Daci_5960 CBS domain-containing protein; PFAM: protein of unknown function DUF294 nucleotidyltransferase; CBS domain containing protein; cyclic nucleotide-binding; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein YP_004128389.1 PFAM: DSBA oxidoreductase; KEGG: dac:Daci_5961 DsbA oxidoreductase YP_004128390.1 PFAM: protein of unknown function DUF1289; KEGG: dia:Dtpsy_3035 protein of unknown function DUF1289 YP_004128391.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: vap:Vapar_4709 YbaK/prolyl-tRNA synthetase associated region YP_004128392.1 PFAM: pyruvate carboxyltransferase; KEGG: ajs:Ajs_3757 hydroxymethylglutaryl-CoA lyase YP_004128393.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dia:Dtpsy_3039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004128394.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: ajs:Ajs_3759 3-methylcrotonoyl-CoA carboxylase, alpha subunit YP_004128395.1 KEGG: dia:Dtpsy_3041 transmembrane protein YP_004128396.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3761 enoyl-CoA hydratase YP_004128397.1 KEGG: dia:Dtpsy_3044 propionyl-CoA carboxylase; PFAM: carboxyl transferase YP_004128398.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dia:Dtpsy_3045 AMP-binding domain protein YP_004128399.1 KEGG: dia:Dtpsy_3046 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004128400.1 PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_3767 glutathione S-transferase domain-containing protein YP_004128401.1 KEGG: vei:Veis_0287 glucose-methanol-choline oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_004128402.1 PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_0291 extracellular ligand-binding receptor YP_004128403.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_0290 inner-membrane translocator YP_004128404.1 KEGG: vei:Veis_0289 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase YP_004128405.1 KEGG: vei:Veis_0288 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004128406.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: vei:Veis_0287 glucose-methanol-choline oxidoreductase YP_004128407.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3769 AMP-dependent synthetase and ligase YP_004128408.1 KEGG: ctt:CtCNB1_3118 transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004128409.1 KEGG: dac:Daci_0287 hydroxymethylglutaryl-CoA reductase, degradative; TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative YP_004128410.1 KEGG: dia:Dtpsy_3047 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004128411.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: dia:Dtpsy_3048 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein YP_004128412.1 PFAM: extracellular solute-binding protein family 5; KEGG: dia:Dtpsy_3049 extracellular solute-binding protein family 5 YP_004128413.1 KEGG: rfr:Rfer_2484 hypothetical protein YP_004128414.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: rfr:Rfer_2485 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004128415.1 KEGG: dac:Daci_5982 hypothetical protein YP_004128416.1 KEGG: pna:Pnap_0218 hypothetical protein YP_004128417.1 PFAM: protein of unknown function DUF421; KEGG: aav:Aave_4363 hypothetical protein YP_004128418.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reh:H16_A2299 IclR family transcriptional regulator YP_004128419.1 KEGG: aav:Aave_4364 peptidase E; PFAM: peptidase S51 dipeptidase E YP_004128420.1 PFAM: protein of unknown function DUF1177; KEGG: reh:H16_A2301 hypothetical protein YP_004128421.1 PFAM: AroM family protein; KEGG: cti:RALTA_A1846 hypothetical protein YP_004128422.1 KEGG: cti:RALTA_A1847 conserved hypothetical protein, UPF0065 YP_004128423.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_3774 acyl-CoA dehydrogenase domain-containing protein YP_004128424.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_3053 short chain dehydrogenase YP_004128425.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ctt:CtCNB1_0487 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004128426.1 KEGG: ajs:Ajs_3777 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase YP_004128427.1 KEGG: dia:Dtpsy_3056 carbonate dehydratase; PFAM: carbonic anhydrase YP_004128428.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ajs:Ajs_3779 isovaleryl-CoA dehydrogenase YP_004128429.1 KEGG: dia:Dtpsy_3058 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_004128430.1 KEGG: ajs:Ajs_3785 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004128431.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: dia:Dtpsy_3060 response regulator receiver modulated CheB methylesterase; SMART: response regulator receiver YP_004128432.1 PFAM: CheD family protein; KEGG: ajs:Ajs_3787 chemoreceptor glutamine deamidase CheD YP_004128433.1 PFAM: MCP methyltransferase CheR-type; KEGG: dia:Dtpsy_3062 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_004128434.1 KEGG: dia:Dtpsy_3063 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004128435.1 KEGG: ajs:Ajs_3790 CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_004128436.1 KEGG: dia:Dtpsy_3065 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004128437.1 KEGG: dia:Dtpsy_3066 hypothetical protein YP_004128438.1 KEGG: ajs:Ajs_3793 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein YP_004128439.1 KEGG: dia:Dtpsy_3068 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004128440.1 KEGG: ajs:Ajs_3795 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_004128441.1 KEGG: ajs:Ajs_3796 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_004128442.1 KEGG: ajs:Ajs_3797 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_004128443.1 KEGG: ajs:Ajs_3798 flagellar biosynthesis protein, FliO YP_004128444.1 KEGG: dia:Dtpsy_3073 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_004128445.1 KEGG: dia:Dtpsy_3074 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_004128446.1 PFAM: flagellar basal body-associated protein FliL; KEGG: dia:Dtpsy_3075 flagellar basal body-associated protein FliL YP_004128447.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: ajs:Ajs_3802 flagellar hook-length control protein YP_004128448.1 KEGG: dia:Dtpsy_3077 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein YP_004128449.1 TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: dia:Dtpsy_3078 ATPase FliI/YscN; SMART: AAA ATPase YP_004128450.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dia:Dtpsy_3079 flagellar assembly protein FliH YP_004128451.1 KEGG: dia:Dtpsy_3080 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_004128452.1 KEGG: dia:Dtpsy_3081 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_004128453.1 KEGG: dia:Dtpsy_3082 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_004128454.1 KEGG: dia:Dtpsy_3083 flagellar protein FliT YP_004128455.1 KEGG: dia:Dtpsy_3084 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_004128456.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; flagellin hook IN repeat protein; KEGG: aav:Aave_4399 flagellar hook-associated 2 domain-containing protein YP_004128457.1 PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: aav:Aave_4400 flagellin domain-containing protein YP_004128458.1 PFAM: flagellin domain protein; KEGG: aav:Aave_4401 flagellin domain-containing protein YP_004128459.1 KEGG: psa:PST_1402 hypothetical protein; manually curated; PFAM: glycosyl transferase family 2; Capsule polysaccharide biosynthesis protein YP_004128460.1 PFAM: Dimethylmenaquinone methyltransferase; acylneuraminate cytidylyltransferase; KEGG: syd:Syncc9605_2247 demethylmenaquinone methyltransferase-like YP_004128461.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dia:Dtpsy_3088 MotA/TolQ/ExbB proton channel YP_004128462.1 PFAM: OmpA/MotB domain protein; KEGG: dia:Dtpsy_3089 OmpA/MotB domain protein YP_004128463.1 KEGG: dia:Dtpsy_3090 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004128464.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: ajs:Ajs_3818 chemotaxis phosphatase, CheZ YP_004128465.1 PFAM: type III secretion exporter; KEGG: dia:Dtpsy_3092 type III secretion exporter YP_004128466.1 KEGG: dia:Dtpsy_3093 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_004128467.1 TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: ajs:Ajs_3821 GTP-binding signal recognition particle; SMART: AAA ATPase YP_004128468.1 KEGG: ajs:Ajs_3822 hypothetical protein YP_004128469.1 KEGG: dia:Dtpsy_3096 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004128470.1 KEGG: ajs:Ajs_3824 hypothetical protein YP_004128471.1 KEGG: dia:Dtpsy_3098 anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein YP_004128472.1 KEGG: dia:Dtpsy_3099 flagella basal body P-ring formation protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein YP_004128473.1 KEGG: ajs:Ajs_3827 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_004128474.1 KEGG: dia:Dtpsy_3101 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004128475.1 PFAM: flagellar hook capping protein; KEGG: dia:Dtpsy_3102 flagellar hook capping protein YP_004128476.1 KEGG: aav:Aave_4423 hypothetical protein; TIGRFAM: flagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004128477.1 KEGG: dia:Dtpsy_3104 flagellar basal-body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body protein; PFAM: flagellar basal body rod protein YP_004128478.1 KEGG: dia:Dtpsy_3105 flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004128479.1 PFAM: flagellar L-ring protein; KEGG: aav:Aave_4426 flagellar L-ring protein YP_004128480.1 PFAM: flagellar P-ring protein; KEGG: aav:Aave_4428 flagellar basal body P-ring protein YP_004128481.1 TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: ajs:Ajs_3836 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2 YP_004128482.1 KEGG: dia:Dtpsy_3110 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004128483.1 KEGG: aav:Aave_4431 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_004128484.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_3839 signal transduction protein YP_004128485.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_3841 2-nitropropane dioxygenase, NPD YP_004128486.1 KEGG: dia:Dtpsy_3115 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004128487.1 KEGG: ajs:Ajs_3843 hypothetical protein YP_004128488.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: vap:Vapar_0746 protein of unknown function DUF6 transmembrane YP_004128489.1 PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_3845 GntR family transcriptional regulator YP_004128490.1 KEGG: dia:Dtpsy_3119 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_004128491.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dia:Dtpsy_3120 hypothetical protein YP_004128492.1 KEGG: dia:Dtpsy_3121 hypothetical protein YP_004128493.1 PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_3122 extracellular ligand-binding receptor YP_004128494.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_3123 short-chain dehydrogenase/reductase SDR YP_004128495.1 PFAM: Phosphoglycerate mutase; KEGG: dia:Dtpsy_3124 phosphoglycerate mutase YP_004128496.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pmy:Pmen_1813 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004128497.1 PFAM: nuclear export factor GLE1; KEGG: vap:Vapar_4773 protein of unknown function DUF461 YP_004128498.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ctt:CtCNB1_0607 TonB-dependent receptor YP_004128499.1 KEGG: vap:Vapar_2119 hypothetical protein YP_004128500.1 PFAM: Creatininase; KEGG: dia:Dtpsy_3125 creatininase YP_004128501.1 PFAM: Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: dac:Daci_0588 hypothetical protein YP_004128502.1 KEGG: dia:Dtpsy_3127 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region YP_004128503.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: vap:Vapar_0729 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004128504.1 PFAM: protein of unknown function DUF81; KEGG: har:HEAR3236 hypothetical protein YP_004128505.1 PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: bpt:Bpet1138 peptidoglycan binding-like domain-containing protein YP_004128506.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: ajs:Ajs_3861 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_004128507.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: dia:Dtpsy_3135 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein YP_004128508.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: dia:Dtpsy_0032 beta-ketothiolase; PFAM: Thiolase-like YP_004128509.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dac:Daci_0026 enoyl-CoA hydratase/isomerase YP_004128510.1 KEGG: dac:Daci_0028 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004128511.1 PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0029 extracellular ligand-binding receptor YP_004128512.1 PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4064 inner-membrane translocator YP_004128513.1 PFAM: inner-membrane translocator; KEGG: dac:Daci_0031 inner-membrane translocator YP_004128514.1 KEGG: dac:Daci_0032 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004128515.1 PFAM: regulatory protein TetR; KEGG: dac:Daci_0033 TetR family transcriptional regulator YP_004128516.1 PFAM: Auxin Efflux Carrier; KEGG: ajs:Ajs_3864 auxin efflux carrier YP_004128517.1 PFAM: UvrD/REP helicase; KEGG: dia:Dtpsy_3138 UvrD/REP helicase YP_004128518.1 manually curated; KEGG: dia:Dtpsy_3139 hypothetical protein YP_004128519.1 KEGG: dia:Dtpsy_3140 phospholipase A1; PFAM: phospholipase A1 YP_004128520.1 PFAM: protein of unknown function DUF323; KEGG: reu:Reut_B4568 hypothetical protein YP_004128521.1 PFAM: sulfatase; KEGG: pap:PSPA7_3903 arylsulfatase YP_004128522.1 KEGG: reu:Reut_B4677 catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004128523.1 PFAM: monooxygenase FAD-binding; KEGG: reu:Reut_B4679 monooxygenase, FAD-binding YP_004128524.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4678 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_004128525.1 KEGG: vap:Vapar_4252 porin YP_004128526.1 KEGG: reu:Reut_B4680 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004128527.1 KEGG: dia:Dtpsy_3141 hypothetical protein YP_004128528.1 PFAM: UspA domain-containing protein; KEGG: dia:Dtpsy_3142 UspA domain protein YP_004128529.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: dia:Dtpsy_3143 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_004128530.1 KEGG: dia:Dtpsy_3145 hypothetical protein YP_004128531.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: dar:Daro_3803 PAS; SMART: PAS domain containing protein; PAC repeat-containing protein YP_004128532.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: dac:Daci_4431 6-phosphogluconate dehydrogenase NAD-binding YP_004128533.1 KEGG: dac:Daci_4430 hypothetical protein YP_004128534.1 KEGG: dac:Daci_5794 hypothetical protein YP_004128535.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_4429 hypothetical protein YP_004128536.1 KEGG: bpt:Bpet0387 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004128537.1 KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase YP_004128538.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: pna:Pnap_0392 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 YP_004128539.1 PFAM: phosphoribosyltransferase; KEGG: tbd:Tbd_0103 transcriptional regulator PyrR, putative YP_004128540.1 PFAM: phosphoribosyltransferase; KEGG: rfr:Rfer_0394 phosphoribosyltransferase YP_004128541.1 KEGG: rfr:Rfer_0395 dienelactone hydrolase YP_004128542.1 KEGG: azo:azo0111 alcohol dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein YP_004128543.1 KEGG: dia:Dtpsy_3156 hypothetical protein YP_004128544.1 PFAM: monooxygenase FAD-binding; KEGG: ajs:Ajs_3884 FAD dependent oxidoreductase YP_004128545.1 KEGG: ajs:Ajs_3885 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004128546.1 PFAM: domain of unknown function DUF1745; FIST C domain; KEGG: dia:Dtpsy_3160 domain of unknown function DUF1745 YP_004128547.1 KEGG: dia:Dtpsy_3161 hypothetical protein YP_004128548.1 KEGG: dia:Dtpsy_3162 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004128549.1 KEGG: ajs:Ajs_3890 protein tyrosine/serine phosphatase YP_004128550.1 KEGG: dia:Dtpsy_0399 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_004128551.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: dia:Dtpsy_0398 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_004128552.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: aav:Aave_0625 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_004128553.1 KEGG: aav:Aave_0624 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_004128554.1 KEGG: dia:Dtpsy_0395 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_004128555.1 KEGG: ctt:CtCNB1_4432 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_004128556.1 manually curated; TIGRFAM: preprotein translocase, SecY subunit; KEGG: dia:Dtpsy_0393 preprotein translocase subunit SecY; PFAM: SecY protein YP_004128557.1 TIGRFAM: ribosomal protein L15; KEGG: ctt:CtCNB1_4434 ribosomal protein L15 YP_004128558.1 KEGG: dia:Dtpsy_0391 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_004128559.1 KEGG: dia:Dtpsy_0390 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5 YP_004128560.1 KEGG: dia:Dtpsy_0389 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_004128561.1 KEGG: dia:Dtpsy_0388 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_004128562.1 PFAM: ribosomal protein S8; KEGG: aav:Aave_0615 30S ribosomal protein S8 YP_004128563.1 PFAM: ribosomal protein S14; KEGG: dia:Dtpsy_0386 30S ribosomal protein S14 YP_004128564.1 KEGG: dia:Dtpsy_0385 50S ribosomal protein L5 YP_004128565.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: dia:Dtpsy_0384 50S ribosomal protein L24; SMART: KOW domain protein YP_004128566.1 KEGG: dia:Dtpsy_0383 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_004128567.1 KEGG: aav:Aave_0610 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004128568.1 KEGG: ajs:Ajs_0383 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; regulatory protein Crp YP_004128569.1 KEGG: dia:Dtpsy_0373 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_004128570.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: dia:Dtpsy_0372 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004128571.1 PFAM: Spore coat protein CotH; KEGG: glo:Glov_2109 spore coat protein CotH YP_004128572.1 KEGG: dia:Dtpsy_0371 4-hydroxybenzoate polyprenyl transferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_004128573.1 PFAM: Ferritin Dps family protein; KEGG: dia:Dtpsy_0369 ferritin Dps family protein YP_004128574.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_0368 transcriptional regulator, LysR family YP_004128575.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: ajs:Ajs_0376 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_004128576.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dia:Dtpsy_0366 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004128577.1 KEGG: dia:Dtpsy_0365 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004128578.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0373 hypothetical protein YP_004128579.1 KEGG: ctt:CtCNB1_4698 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_004128580.1 KEGG: vei:Veis_0179 hypothetical protein YP_004128581.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_0178 LysR family transcriptional regulator YP_004128582.1 KEGG: dia:Dtpsy_0363 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily YP_004128583.1 KEGG: dia:Dtpsy_0361 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004128584.1 KEGG: ctt:CtCNB1_4464 hypothetical protein YP_004128585.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: dia:Dtpsy_0359 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_004128586.1 KEGG: dia:Dtpsy_0358 anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004128587.1 KEGG: bpt:Bpet1027 receptor protein-tyrosine kinase YP_004128588.1 PFAM: Prophage CP4-57 regulatory; KEGG: ajs:Ajs_1320 phage transcriptional regulator, AlpA YP_004128589.1 KEGG: ajs:Ajs_1319 cobyrinic acid a,c-diamide synthase YP_004128590.1 KEGG: ajs:Ajs_1318 hypothetical protein YP_004128591.1 KEGG: bpt:Bpet1031 hypothetical protein YP_004128592.1 PFAM: Protein of unknown function DUF2857; KEGG: rme:Rmet_2293 hypothetical protein YP_004128593.1 KEGG: bpt:Bpet1033 hypothetical protein YP_004128594.1 KEGG: bpt:Bpet1034 transposon; TIGRFAM: Domain of unknown function DUF1845; PFAM: Domain of unknown function DUF1845 YP_004128595.1 PFAM: Protein of unknown function DUF3158; KEGG: bpt:Bpet1035 hypothetical protein YP_004128596.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ajs:Ajs_1446 single-stranded DNA-binding protein YP_004128597.1 PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: ajs:Ajs_1445 DNA topoisomerase III; SMART: DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein YP_004128598.1 KEGG: ctt:CtCNB1_3734 IstB-like ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004128599.1 PFAM: Integrase catalytic region; regulatory protein MerR; KEGG: ctt:CtCNB1_2459 IstA YP_004128600.1 KEGG: rme:Rmet_2326 hypothetical protein YP_004128601.1 KEGG: ajs:Ajs_1420 hypothetical protein YP_004128602.1 KEGG: ajs:Ajs_1419 hypothetical protein YP_004128603.1 KEGG: ajs:Ajs_1286 hypothetical protein YP_004128604.1 SMART: DEAD-like helicase; KEGG: rme:Rmet_2330 helicase-like protein YP_004128605.1 TIGRFAM: Integrating conjugative element protein PilL, PFGI-1; KEGG: pla:Plav_3409 hypothetical protein YP_004128606.1 KEGG: bpt:Bpet1067 hypothetical protein YP_004128607.1 KEGG: bpt:Bpet1068 hypothetical protein YP_004128608.1 PFAM: Lytic transglycosylase catalytic; KEGG: bpt:Bpet1069 hypothetical protein YP_004128609.1 KEGG: bpt:Bpet1070 hypothetical protein YP_004128610.1 manually curated; KEGG: ajs:Ajs_1274 hypothetical protein YP_004128611.1 TIGRFAM: Integrating conjugative element protein, PFL4697, membrane; KEGG: dia:Dtpsy_1174 hypothetical protein YP_004128612.1 PFAM: Protein of unknown function, RAQPRD; KEGG: bpt:Bpet1073 hypothetical protein YP_004128613.1 KEGG: ajs:Ajs_1263 hypothetical protein YP_004128614.1 KEGG: bpt:Bpet1075 hypothetical protein YP_004128615.1 KEGG: bpt:Bpet1076 hypothetical protein YP_004128616.1 KEGG: bpt:Bpet1077 hypothetical protein YP_004128617.1 KEGG: dia:Dtpsy_1167 secreted protein YP_004128618.1 TIGRFAM: Integrating conjugative element protein, PFL4705; KEGG: bpt:Bpet1079 hypothetical protein YP_004128619.1 TIGRFAM: Conjugative transfer region lipoprotein; KEGG: ajs:Ajs_1257 secreted protein YP_004128620.1 KEGG: ajs:Ajs_1398 hypothetical protein YP_004128621.1 PFAM: DSBA oxidoreductase; KEGG: bpt:Bpet1082 hypothetical protein YP_004128622.1 KEGG: bpt:Bpet1083 DNA repair protein RadC-like protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004128623.1 KEGG: bpt:Bpet1084 secreted protein; TIGRFAM: protein of unknown function DUF1525; PFAM: protein of unknown function DUF1525 YP_004128624.1 KEGG: bpt:Bpet1502 hypothetical protein; TIGRFAM: protein of unknown function DUF1527; PFAM: protein of unknown function DUF1527 YP_004128625.1 TIGRFAM: Integrating conjugative element protein, PFL4711; KEGG: bpt:Bpet1086 hypothetical protein YP_004128626.1 KEGG: bpt:Bpet1504 hypothetical protein YP_004128627.1 KEGG: ajs:Ajs_1391 hypothetical protein YP_004128628.1 KEGG: ajs:Ajs_1390 hypothetical protein YP_004128629.1 PFAM: RES domain protein; KEGG: bpt:Bpet1090 hypothetical protein YP_004128630.1 KEGG: ajs:Ajs_1388 hypothetical protein YP_004128631.1 PFAM: Relaxase; protein of unknown function DUF1528; KEGG: har:HEAR2031 hypothetical protein YP_004128632.1 manually curated; KEGG: dds:Ddes_1324 hypothetical protein YP_004128633.1 KEGG: pla:Plav_3441 hypothetical protein YP_004128634.1 KEGG: pla:Plav_3442 hypothetical protein YP_004128635.1 PFAM: Integrase catalytic region; regulatory protein MerR; KEGG: ctt:CtCNB1_2459 IstA YP_004128636.1 KEGG: ctt:CtCNB1_3734 IstB-like ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004128637.1 KEGG: bpf:BpOF4_15365 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_004128638.1 KEGG: pna:Pnap_4804 hypothetical protein YP_004128639.1 PFAM: RES domain protein; KEGG: avn:Avin_32410 hypothetical protein YP_004128640.1 KEGG: avn:Avin_32400 hypothetical protein YP_004128641.1 PFAM: Chorismate mutase, type II; KEGG: dia:Dtpsy_0357 chorismate mutase YP_004128642.1 TIGRFAM: anthranilate synthase component I; KEGG: dia:Dtpsy_0356 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_004128643.1 KEGG: dia:Dtpsy_0354 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004128644.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold domain protein; KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein; PAC repeat-containing protein YP_004128645.1 KEGG: dia:Dtpsy_0352 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004128646.1 KEGG: ajs:Ajs_0362 hypothetical protein YP_004128647.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: dia:Dtpsy_0350 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004128648.1 PFAM: ApaG domain protein; KEGG: dia:Dtpsy_0349 ApaG YP_004128649.1 PFAM: site-specific recombinase Gcr; KEGG: ajs:Ajs_0359 site-specific recombinase transmembrane protein YP_004128650.1 PFAM: sodium/hydrogen exchanger; KEGG: ajs:Ajs_0358 sodium/hydrogen exchanger YP_004128651.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: dia:Dtpsy_0346 carboxylate-amine ligase YP_004128652.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: ajs:Ajs_0356 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004128653.1 PFAM: regulatory protein TetR; KEGG: bte:BTH_II0441 TetR family transcriptional regulator YP_004128654.1 PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: eba:ebA5073 poly-beta-hydroxyalkanoate synthase YP_004128655.1 KEGG: har:HEAR2593 outer membrane transport protein involved in copper (silver) tolerance (CusC); TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004128656.1 PFAM: secretion protein HlyD family protein; KEGG: har:HEAR2592 ABC transport system, membrane protein YP_004128657.1 KEGG: dac:Daci_0759 ABC transporter related; PFAM: ABC transporter related; ABC transporter; SMART: AAA ATPase YP_004128658.1 PFAM: ABC transporter; KEGG: dia:Dtpsy_1496 ABC transporter YP_004128659.1 KEGG: rpf:Rpic12D_4426 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: MaoC domain protein dehydratase; phosphate acetyl/butaryl transferase YP_004128660.1 KEGG: dac:Daci_0754 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_004128661.1 PFAM: phosphatidylglycerophosphatase A; KEGG: dia:Dtpsy_0344 phosphatidylglycerophosphatase A YP_004128662.1 PFAM: CinA domain protein; KEGG: ajs:Ajs_0354 CinA domain-containing protein YP_004128663.1 KEGG: lch:Lcho_3216 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004128664.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: slt:Slit_1460 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein YP_004128665.1 KEGG: nhl:Nhal_1312 response regulator receiver; PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver YP_004128666.1 KEGG: lch:Lcho_2722 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein YP_004128667.1 PFAM: SEC-C motif domain protein; KEGG: dia:Dtpsy_0342 sec-C motif domain protein YP_004128668.1 KEGG: dia:Dtpsy_0340 hypothetical protein YP_004128669.1 KEGG: ajs:Ajs_0350 RNA methylase; PFAM: RNA methylase; THUMP domain-containing protein YP_004128670.1 KEGG: aav:Aave_0421 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004128671.1 KEGG: ajs:Ajs_0349 hypothetical protein YP_004128672.1 KEGG: dia:Dtpsy_0337 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_004128673.1 KEGG: aav:Aave_0418 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004128674.1 KEGG: dia:Dtpsy_0335 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein YP_004128675.1 PFAM: DSBA oxidoreductase; KEGG: dia:Dtpsy_0334 DsbA oxidoreductase YP_004128676.1 PFAM: Sporulation domain-containing protein; KEGG: dia:Dtpsy_0333 sporulation domain protein YP_004128677.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: ajs:Ajs_0343 arginyl-tRNA synthetase YP_004128678.1 PFAM: PsiF repeat-containing protein; KEGG: dia:Dtpsy_0331 PsiF repeat protein YP_004128679.1 PFAM: Protein of unknown function DUF2214, membrane; KEGG: ajs:Ajs_0341 transmembrane protein YP_004128680.1 PFAM: sodium:dicarboxylate symporter; KEGG: dac:Daci_2923 sodium:dicarboxylate symporter YP_004128681.1 KEGG: dac:Daci_2922 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_004128682.1 KEGG: dac:Daci_2921 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_004128683.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_0328 transcriptional regulator, LysR family YP_004128684.1 TIGRFAM: malate synthase G; KEGG: dia:Dtpsy_0327 malate synthase G; PFAM: Malate synthase family protein YP_004128685.1 manually curated; KEGG: ajs:Ajs_0337 hypothetical protein YP_004128686.1 KEGG: dia:Dtpsy_0325 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_004128687.1 PFAM: protein of unknown function DUF169; KEGG: bbt:BBta_4610 hypothetical protein YP_004128688.1 PFAM: glutamine amidotransferase class-II; KEGG: ajs:Ajs_0335 glutamine amidotransferase, class-II YP_004128689.1 TIGRFAM: glutathione synthetase; KEGG: dia:Dtpsy_3256 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_004128690.1 KEGG: dia:Dtpsy_3257 benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein YP_004128691.1 PFAM: K potassium transporter; KEGG: dia:Dtpsy_3258 K potassium transporter YP_004128692.1 KEGG: dia:Dtpsy_3259 glutamate/cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA YP_004128693.1 PFAM: cation transporter; KEGG: dac:Daci_5998 cation transporter YP_004128694.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dia:Dtpsy_3261 potassium transporter peripheral membrane component YP_004128695.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: ajs:Ajs_3913 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase YP_004128696.1 KEGG: pde:Pden_0614 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_004128697.1 KEGG: ank:AnaeK_1753 RimK domain protein ATP-grasp YP_004128698.1 KEGG: cph:Cpha266_0056 peptidase M12A, astacin; PFAM: peptidase M12A astacin; SMART: peptidase metallopeptidase YP_004128699.1 KEGG: dia:Dtpsy_3263 hypothetical protein YP_004128700.1 KEGG: dia:Dtpsy_3264 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta YP_004128701.1 PFAM: Rare lipoprotein B; KEGG: dia:Dtpsy_3265 rare lipoprotein B YP_004128702.1 KEGG: ajs:Ajs_3917 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_004128703.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ajs:Ajs_3919 MscS mechanosensitive ion channel YP_004128704.1 PFAM: Aldehyde Dehydrogenase; KEGG: bmj:BMULJ_03133 NAD-dependent aldehyde dehydrogenase YP_004128705.1 KEGG: pna:Pnap_0735 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004128706.1 KEGG: pna:Pnap_0736 cytochrome c-type protein YP_004128707.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; EAL domain protein; KEGG: bxe:Bxe_C0015 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein YP_004128708.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_3920 biopolymer transport protein ExbD/TolR YP_004128709.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dia:Dtpsy_3269 MotA/TolQ/ExbB proton channel YP_004128710.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: ajs:Ajs_3922 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_004128711.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: dia:Dtpsy_3271 SmpA/OmlA domain protein YP_004128712.1 PFAM: ferric-uptake regulator; KEGG: dia:Dtpsy_3272 ferric uptake regulator, Fur family YP_004128713.1 PFAM: HPr serine kinase domain-containing protein; KEGG: dia:Dtpsy_3273 HPr kinase/phosphorylase YP_004128714.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ajs:Ajs_3926 PTS IIA-like nitrogen-regulatory protein PtsN YP_004128715.1 KEGG: dia:Dtpsy_3275 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004128716.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: dia:Dtpsy_3276 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004128717.1 KEGG: dia:Dtpsy_3279 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004128718.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: dia:Dtpsy_3282 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004128719.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: dia:Dtpsy_3283 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004128720.1 KEGG: ajs:Ajs_3936 translation factor SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein YP_004128721.1 KEGG: ajs:Ajs_3937 lipase YP_004128722.1 KEGG: aav:Aave_2743 hypothetical protein YP_004128723.1 KEGG: app:CAP2UW1_2151 ATPase YP_004128724.1 KEGG: pna:Pnap_4127 hypothetical protein YP_004128725.1 KEGG: bbt:BBta_1239 hypothetical protein YP_004128726.1 KEGG: bvi:Bcep1808_0010 hypothetical protein YP_004128727.1 KEGG: ppg:PputGB1_3382 hypothetical protein YP_004128728.1 KEGG: rpf:Rpic12D_2698 hypothetical protein YP_004128729.1 KEGG: xac:XAC3233 transposase YP_004128730.1 KEGG: ajs:Ajs_3918 transposase, IS4 family protein; manually curated; PFAM: transposase IS4 family protein YP_004128731.1 KEGG: aba:Acid345_1066 hypothetical protein YP_004128732.1 KEGG: xac:XAC3234 hypothetical protein YP_004128733.1 PFAM: OmpW family protein; KEGG: pna:Pnap_1827 OmpW family protein YP_004128734.1 KEGG: pna:Pnap_1828 hypothetical protein YP_004128735.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: dia:Dtpsy_3288 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_004128736.1 PFAM: peptidase M22 glycoprotease; KEGG: ajs:Ajs_3940 peptidase M22, glycoprotease YP_004128737.1 KEGG: dia:Dtpsy_3290 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004128738.1 KEGG: dia:Dtpsy_3291 phage SPO1 DNA polymerase-related protein YP_004128739.1 KEGG: dac:Daci_0973 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_004128740.1 KEGG: dre:554779 odorant receptor, family C, subfamily 103, member 2 YP_004128741.1 KEGG: rle:pRL100018 NTP-binding transposase-related protein YP_004128742.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: dia:Dtpsy_3298 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_004128743.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3950 AMP-dependent synthetase and ligase YP_004128744.1 KEGG: ctt:CtCNB1_0258 NAD(P) transhydrogenase, beta subunit; PFAM: NAD(P) transhydrogenase beta subunit YP_004128745.1 KEGG: bpt:Bpet4170 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein YP_004128746.1 KEGG: dia:Dtpsy_3302 hypothetical protein YP_004128747.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: dia:Dtpsy_3304 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II YP_004128748.1 TIGRFAM: pyruvate kinase; KEGG: dia:Dtpsy_3305 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_004128749.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: dia:Dtpsy_3306 peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein YP_004128750.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dac:Daci_0802 enoyl-CoA hydratase YP_004128751.1 KEGG: dac:Daci_0801 hypothetical protein YP_004128752.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: dac:Daci_0800 L-carnitine dehydratase/bile acid-inducible protein F YP_004128753.1 KEGG: rme:Rmet_5111 thiolase YP_004128754.1 PFAM: protein of unknown function DUF35; KEGG: rme:Rmet_5112 hypothetical protein YP_004128755.1 KEGG: rme:Rmet_5113 extra-cytoplasmic solute receptor YP_004128756.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_5106 LysR family transcriptional regulator YP_004128757.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ajs:Ajs_3958 nucleotidyl transferase YP_004128758.1 manually curated; TIGRFAM: transketolase; KEGG: dia:Dtpsy_3309 transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_004128759.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004128760.1 KEGG: dia:Dtpsy_3312 ribosomal subunit interface protein, putative YP_004128761.1 PFAM: peptidase C26; KEGG: dia:Dtpsy_3313 peptidase C26 YP_004128762.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_2148 LysR family transcriptional regulator YP_004128763.1 PFAM: amidohydrolase 2; KEGG: pol:Bpro_2147 amidohydrolase 2 YP_004128764.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_2146 short-chain dehydrogenase/reductase SDR YP_004128765.1 KEGG: pol:Bpro_2145 hypothetical protein YP_004128766.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase YP_004128767.1 KEGG: pol:Bpro_2143 hypothetical protein YP_004128768.1 KEGG: dac:Daci_2267 PepSY-associated TM helix domain-containing protein YP_004128769.1 KEGG: ctt:CtCNB1_3496 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004128770.1 KEGG: dia:Dtpsy_3314 peptidylprolyl isomerase, FKBP-type YP_004128771.1 KEGG: ctt:CtCNB1_4653 TctC YP_004128772.1 KEGG: ctt:CtCNB1_4654 hypothetical protein YP_004128773.1 PFAM: protein of unknown function DUF1446; KEGG: ctt:CtCNB1_4655 NAD-dependent aldehyde dehydrogenase YP_004128774.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctt:CtCNB1_4656 transcriptional regulator, LysR family YP_004128775.1 PFAM: transcription activator effector binding; KEGG: aav:Aave_4607 transcription activator, effector binding YP_004128776.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_3318 short-chain dehydrogenase/reductase SDR YP_004128777.1 KEGG: dia:Dtpsy_3319 hypothetical protein YP_004128778.1 PFAM: DTW domain containing protein; KEGG: ajs:Ajs_3970 DTW domain-containing protein YP_004128779.1 KEGG: ajs:Ajs_3971 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004128780.1 KEGG: ajs:Ajs_3972 thiolase YP_004128781.1 PFAM: protein of unknown function DUF35; KEGG: ajs:Ajs_3973 hypothetical protein YP_004128782.1 KEGG: dia:Dtpsy_3324 hypothetical protein YP_004128783.1 PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: dia:Dtpsy_3325 CoA-binding domain protein YP_004128784.1 PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_3976 glutathione S-transferase domain-containing protein YP_004128785.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_3977 3-ketoacyl-(acyl-carrier-protein) reductase YP_004128786.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_3978 glyoxalase/bleomycin resistance protein/dioxygenase YP_004128787.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; SWIB/MDM2 domain-containing protein; KEGG: ajs:Ajs_3990 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; SWIB domain YP_004128788.1 KEGG: dia:Dtpsy_3340 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET YP_004128789.1 KEGG: dia:Dtpsy_3341 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_004128790.1 PFAM: Sporulation domain-containing protein; KEGG: dia:Dtpsy_3342 sporulation domain protein YP_004128791.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_2134 alcohol dehydrogenase YP_004128792.1 PFAM: MaoC domain protein dehydratase; KEGG: reu:Reut_B4755 MaoC-like dehydratase YP_004128793.1 KEGG: reu:Reut_B4756 hypothetical protein YP_004128794.1 PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_2466 extracellular ligand-binding receptor YP_004128795.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C7155 AMP-dependent synthetase and ligase YP_004128796.1 KEGG: vei:Veis_4103 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004128797.1 KEGG: afw:Anae109_4130 hypothetical protein YP_004128798.1 PFAM: RES domain protein; KEGG: azo:azo2874 hypothetical protein YP_004128799.1 PFAM: NAD/NADP octopine/nopaline dehydrogenase; Ketopantoate reductase ApbA/PanE domain protein; KEGG: vap:Vapar_0420 NAD/NADP octopine/nopaline dehydrogenase YP_004128800.1 KEGG: vap:Vapar_0421 hypothetical protein YP_004128801.1 KEGG: dia:Dtpsy_3348 histidine kinase; PFAM: Two-component sensor kinase domain-containing protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004128802.1 KEGG: ajs:Ajs_3999 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004128803.1 KEGG: bcj:BCAL0446 2-aminoethylphosphonate--pyruvate transaminase; TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V YP_004128804.1 KEGG: reu:Reut_B5872 binding-protein dependent transport system inner membrane protein; TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component YP_004128805.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding protein component; PFAM: ABC transporter related; KEGG: reu:Reut_B5873 ABC transporter related; SMART: AAA ATPase YP_004128806.1 KEGG: reu:Reut_B5874 extracellular solute-binding protein; TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1 YP_004128807.1 TIGRFAM: phosphonate utilization associated transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: reu:Reut_B5875 GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_004128808.1 KEGG: reu:Reut_B5876 type I phosphodiesterase/nucleotide pyrophosphatase; TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase YP_004128809.1 KEGG: cti:RALTA_B0682 NAD+ dependent acetaldehyde dehydrogenase; TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004128810.1 TIGRFAM: phosphonate degradation operons associated HDIG domain protein; KEGG: vei:Veis_1186 HD phosphohydrolase-like protein YP_004128811.1 KEGG: bcm:Bcenmc03_3163 aminophosphonate oxidoreductase; TIGRFAM: aminophosphonate oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004128812.1 TIGRFAM: alanine racemase; KEGG: tmz:Tmz1t_3995 alanine racemase; PFAM: alanine racemase domain protein YP_004128813.1 PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_3117 D-amino acid dehydrogenase small subunit YP_004128814.1 KEGG: vap:Vapar_3966 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004128815.1 PFAM: regulatory protein MarR; KEGG: ajs:Ajs_4000 MarR family transcriptional regulator YP_004128816.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: dia:Dtpsy_3351 RecA protein; SMART: AAA ATPase YP_004128817.1 KEGG: dia:Dtpsy_3352 regulatory protein RecX YP_004128818.1 PFAM: protein of unknown function DUF1631; KEGG: dia:Dtpsy_3353 hypothetical protein YP_004128819.1 KEGG: dia:Dtpsy_3354 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004128820.1 KEGG: dia:Dtpsy_3355 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004128821.1 KEGG: dia:Dtpsy_3356 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_004128822.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: ajs:Ajs_4008 indolepyruvate ferredoxin oxidoreductase YP_004128823.1 KEGG: dia:Dtpsy_3359 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004128824.1 PFAM: protein of unknown function DUF894 DitE; KEGG: dia:Dtpsy_3362 protein of unknown function DUF894 DitE YP_004128825.1 PFAM: MltA domain protein; 3D domain-containing protein; KEGG: dia:Dtpsy_3363 MltA domain protein YP_004128826.1 KEGG: adg:Adeg_1325 hypothetical protein YP_004128827.1 PFAM: OmpA/MotB domain protein; KEGG: dia:Dtpsy_3364 OmpA/MotB domain protein YP_004128828.1 KEGG: ajs:Ajs_4015 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004128829.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: dia:Dtpsy_3366 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_004128830.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dia:Dtpsy_3367 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004128831.1 KEGG: dia:Dtpsy_3368 hypothetical protein YP_004128832.1 KEGG: dia:Dtpsy_3369 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: GlnD PII-uridylyltransferase; glutamate-ammonia ligase adenylyltransferase YP_004128833.1 KEGG: dia:Dtpsy_3372 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004128834.1 PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_4023 acriflavin resistance protein YP_004128835.1 PFAM: Glutathione S-transferase domain; KEGG: dia:Dtpsy_3375 glutathione S-transferase domain protein YP_004128836.1 KEGG: dia:Dtpsy_3376 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase domain-containing protein; fumarate lyase YP_004128837.1 PFAM: YaeQ family protein; KEGG: dia:Dtpsy_3377 YaeQ family protein YP_004128838.1 KEGG: dia:Dtpsy_3378 hypothetical protein YP_004128839.1 PFAM: protein of unknown function DUF1289; KEGG: dia:Dtpsy_3379 protein of unknown function DUF1289 YP_004128840.1 PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_4030 integral membrane protein TerC YP_004128841.1 KEGG: ajs:Ajs_4031 hypothetical protein YP_004128842.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_4070 LysR family transcriptional regulator YP_004128843.1 KEGG: dia:Dtpsy_2869 hypothetical protein YP_004128844.1 PFAM: membrane protein of unknown function; KEGG: dia:Dtpsy_3382 membrane protein of unknown function YP_004128845.1 PFAM: peptidase M48 Ste24p; KEGG: dia:Dtpsy_3383 peptidase M48 Ste24p YP_004128846.1 KEGG: ajs:Ajs_4034 GTP cyclohydrolase subunit MoaC; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC YP_004128847.1 KEGG: pna:Pnap_3943 FimB YP_004128848.1 KEGG: pau:PA14_58730 type IV pilin structural subunit YP_004128849.1 KEGG: pol:Bpro_4676 cyclic-AMP phosphodiesterase YP_004128850.1 KEGG: ajs:Ajs_4043 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein YP_004128851.1 KEGG: ajs:Ajs_4044 protein phosphatase 2C domain-containing protein; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein YP_004128852.1 PFAM: Integral membrane protein TerC; KEGG: ajs:Ajs_4045 integral membrane protein TerC YP_004128853.1 KEGG: dia:Dtpsy_3391 succinyl-CoA synthetase subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein YP_004128854.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: dia:Dtpsy_3392 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_004128855.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: dia:Dtpsy_3393 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding YP_004128856.1 KEGG: ajs:Ajs_4049 fis family transcriptional regulator; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_004128857.1 KEGG: ajs:Ajs_4050 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004128858.1 KEGG: dia:Dtpsy_3396 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_004128859.1 KEGG: ajs:Ajs_4052 lipoprotein transmembrane YP_004128860.1 KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_004128861.1 PFAM: AzlC family protein; KEGG: ajs:Ajs_4054 AzlC family protein YP_004128862.1 PFAM: branched-chain amino acid transport; KEGG: dia:Dtpsy_3400 branched-chain amino acid transport YP_004128863.1 KEGG: dia:Dtpsy_3401 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004128864.1 KEGG: dac:Daci_0827 hypothetical protein YP_004128865.1 KEGG: dac:Daci_0826 hypothetical protein YP_004128866.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dia:Dtpsy_3402 protein of unknown function DUF6 transmembrane YP_004128867.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: dia:Dtpsy_3403 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_004128868.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dia:Dtpsy_3404 transcriptional regulator, LysR family YP_004128869.1 KEGG: ajs:Ajs_4060 hypothetical protein YP_004128870.1 KEGG: dia:Dtpsy_3406 hypothetical protein YP_004128871.1 KEGG: aav:Aave_4703 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004128872.1 KEGG: dia:Dtpsy_3409 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_004128873.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_4065 major facilitator superfamily transporter YP_004128874.1 KEGG: ajs:Ajs_4066 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004128875.1 KEGG: bbr:BB4747 transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004128876.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB4746 hypothetical protein YP_004128877.1 KEGG: bbr:BB4754 hypothetical protein YP_004128878.1 PFAM: thioesterase superfamily protein; KEGG: bbr:BB4745 hypothetical protein YP_004128879.1 KEGG: bbr:BB4749 hypothetical protein YP_004128880.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB4750 short chain dehyrogenase YP_004128881.1 PFAM: MaoC domain protein dehydratase; KEGG: bbr:BB4751 hypothetical protein YP_004128882.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bbr:BB4752 acyl-CoA dehydrogenase YP_004128883.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB4753 hypothetical protein YP_004128884.1 KEGG: reu:Reut_C6107 1,4-dihydroxy-2-naphthoate synthase; TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase YP_004128885.1 KEGG: ajs:Ajs_4067 L-lactate transport; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_004128886.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: dia:Dtpsy_3413 tRNA-specific 2-thiouridylase MnmA YP_004128887.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_0298 LysR family transcriptional regulator YP_004128888.1 PFAM: protein of unknown function DUF453; KEGG: vei:Veis_0299 hypothetical protein YP_004128889.1 KEGG: vei:Veis_0300 hypothetical protein YP_004128890.1 PFAM: porin Gram-negative type; KEGG: vei:Veis_0301 porin YP_004128891.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pna:Pnap_3816 LysR family transcriptional regulator YP_004128892.1 KEGG: dia:Dtpsy_3415 tricarballylate dehydrogenase; TIGRFAM: precorrin 3B synthase CobZ; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004128893.1 TIGRFAM: CitB domain protein; KEGG: ajs:Ajs_4071 CitB domain-containing protein YP_004128894.1 KEGG: dia:Dtpsy_3417 hypothetical protein YP_004128895.1 KEGG: dia:Dtpsy_3418 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004128896.1 PFAM: carboxyl transferase; KEGG: dia:Dtpsy_3419 propionyl-CoA carboxylase YP_004128897.1 KEGG: dac:Daci_1098 hypothetical protein YP_004128898.1 PFAM: CoA-binding domain protein; KEGG: dia:Dtpsy_3421 CoA-binding domain protein YP_004128899.1 KEGG: dac:Daci_1096 carbamoyl-phosphate synthase L chain ATP-binding; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004128900.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: dia:Dtpsy_3423 biotin/lipoyl attachment domain-containing protein YP_004128901.1 PFAM: thioesterase superfamily protein; KEGG: dia:Dtpsy_3424 thioesterase superfamily protein YP_004128902.1 PFAM: NUDIX hydrolase; KEGG: dia:Dtpsy_3425 NUDIX hydrolase YP_004128903.1 KEGG: dia:Dtpsy_3426 hypothetical protein YP_004128904.1 KEGG: ajs:Ajs_4075 TonB-dependent copper receptor; TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004128905.1 PFAM: thioesterase superfamily protein; KEGG: met:M446_5737 thioesterase superfamily protein YP_004128906.1 KEGG: bxe:Bxe_C0866 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004128907.1 KEGG: aav:Aave_3937 hypothetical protein YP_004128908.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpf:Rpic12D_1541 L-carnitine dehydratase/bile acid-inducible protein F YP_004128909.1 KEGG: pzu:PHZ_c2530 hypothetical protein YP_004128910.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK2759 acetyl-CoA synthetase (acetate-CoA ligase) YP_004128911.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: ajs:Ajs_4077 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004128912.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bav:BAV2734 amino acid efflux protein YP_004128913.1 KEGG: ajs:Ajs_4082 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein YP_004128914.1 KEGG: dia:Dtpsy_3431 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004128915.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: dia:Dtpsy_3432 propeptide PepSY amd peptidase M4 YP_004128916.1 KEGG: bpt:Bpet0098 hypothetical protein YP_004128917.1 PFAM: Ferric reductase domain protein transmembrane component domain; Oxidoreductase FAD-binding domain protein; KEGG: dia:Dtpsy_3433 ferric reductase domain protein transmembrane component YP_004128918.1 KEGG: pag:PLES_43981 cytochrome b561 YP_004128919.1 KEGG: dia:Dtpsy_3434 hypothetical protein YP_004128920.1 KEGG: ajs:Ajs_4087 hypothetical protein YP_004128921.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; KEGG: ajs:Ajs_4088 oxidoreductase FAD/NAD(P)-binding subunit YP_004128922.1 PFAM: ApbE family lipoprotein; KEGG: dia:Dtpsy_3437 ApbE family lipoprotein YP_004128923.1 KEGG: ajs:Ajs_4090 hypothetical protein YP_004128924.1 KEGG: ajs:Ajs_4091 hypothetical protein YP_004128925.1 KEGG: dia:Dtpsy_3444 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004128926.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bpt:Bpet0267 hypothetical protein YP_004128927.1 KEGG: bpt:Bpetpseudo_01 hypothetical protein YP_004128928.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpt:Bpet0266 acyl-CoA dehydrogenase YP_004128929.1 KEGG: bpt:Bpet0265 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004128930.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpt:Bpet0264 acyl_CoA transferase/carnitine dehydratase YP_004128931.1 KEGG: bpt:Bpet0263 alcohol dehydrogenase III; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004128932.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: sth:STH2463 acyl-CoA dehydrogenase, short-chain specific YP_004128933.1 KEGG: bpt:Bpetpseudo_01 hypothetical protein YP_004128934.1 KEGG: bpt:Bpet0265 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004128935.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpt:Bpet0264 acyl_CoA transferase/carnitine dehydratase YP_004128936.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_4196 LysR family transcriptional regulator YP_004128937.1 KEGG: vap:Vapar_1641 hypothetical protein YP_004128938.1 TIGRFAM: gamma-glutamyltransferase; KEGG: vap:Vapar_1640 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004128939.1 KEGG: scl:sce0660 ABC transporter sodium permease YP_004128940.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: ajs:Ajs_4093 twin-arginine translocation pathway signal YP_004128941.1 PFAM: Spermine synthase; KEGG: dia:Dtpsy_3446 spermidine synthase YP_004128942.1 PFAM: protein of unknown function DUF350; KEGG: dia:Dtpsy_3447 protein of unknown function DUF350 YP_004128943.1 KEGG: dia:Dtpsy_3448 transmembrane protein YP_004128944.1 PFAM: band 7 protein; KEGG: ajs:Ajs_4099 transmembrane protein YP_004128945.1 PFAM: Protein of unknown function DUF2061, membrane; KEGG: dia:Dtpsy_3450 hypothetical protein YP_004128946.1 KEGG: dia:Dtpsy_3453 flagellar basal body rod protein YP_004128947.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_3454 transcriptional regulator, LysR family YP_004128948.1 KEGG: aav:Aave_4744 beta alanine--pyruvate transaminase; PFAM: aminotransferase class-III YP_004128949.1 KEGG: dia:Dtpsy_3456 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004128950.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: aav:Aave_4748 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004128951.1 KEGG: dia:Dtpsy_3457 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004128952.1 KEGG: dia:Dtpsy_3458 extracellular ligand-binding receptor YP_004128953.1 PFAM: inner-membrane translocator; KEGG: dia:Dtpsy_3459 inner-membrane translocator YP_004128954.1 PFAM: inner-membrane translocator; KEGG: dac:Daci_6025 inner-membrane translocator YP_004128955.1 KEGG: dia:Dtpsy_3461 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004128956.1 KEGG: dac:Daci_6027 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004128957.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: dia:Dtpsy_3463 amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004128958.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: dia:Dtpsy_3464 microcystin LR degradation protein MlrC-like protein YP_004128959.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: dia:Dtpsy_3465 malic enzyme YP_004128960.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: dia:Dtpsy_3466 guanine-specific ribonuclease N1 and T1 YP_004128961.1 PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor) YP_004128962.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: dia:Dtpsy_3468 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_004128963.1 PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dia:Dtpsy_3469 SurA domain protein YP_004128964.1 PFAM: Organic solvent tolerance protein; KEGG: dia:Dtpsy_3470 organic solvent tolerance protein YP_004128965.1 PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_4113 aminoglycoside phosphotransferase YP_004128966.1 PFAM: protein of unknown function DUF558; KEGG: dia:Dtpsy_3472 16S ribosomal RNA methyltransferase RsmE YP_004128967.1 KEGG: dia:Dtpsy_3473 hypothetical protein YP_004128968.1 KEGG: ajs:Ajs_4116 hypothetical protein YP_004128969.1 PFAM: SMC domain protein; KEGG: dia:Dtpsy_3475 SMC domain protein YP_004128970.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dia:Dtpsy_3479 peptidase M20 YP_004128971.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dia:Dtpsy_3480 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004128972.1 KEGG: scl:sce1833 hypothetical protein YP_004128973.1 PFAM: Domain of unknown function P63C; KEGG: bbr:BB2198 hypothetical protein YP_004128974.1 KEGG: cts:Ctha_0467 translation initiation factor IF-2 YP_004128975.1 KEGG: dia:Dtpsy_3482 methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein YP_004128976.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: ajs:Ajs_4125 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_004128977.1 PFAM: protein of unknown function UPF0016; KEGG: dia:Dtpsy_3484 protein of unknown function UPF0016 YP_004128978.1 KEGG: dia:Dtpsy_3485 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein YP_004128979.1 KEGG: ajs:Ajs_4128 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein YP_004128980.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_4129 short chain dehydrogenase YP_004128981.1 PFAM: protein of unknown function DUF1239; KEGG: dia:Dtpsy_3488 protein of unknown function DUF1239 YP_004128982.1 KEGG: dia:Dtpsy_3489 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family YP_004128983.1 SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: ajs:Ajs_4132 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_004128984.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; KEGG: ajs:Ajs_4133 potassium efflux system protein YP_004128985.1 KEGG: dia:Dtpsy_3492 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004128986.1 KEGG: ajs:Ajs_4136 hypothetical protein YP_004128987.1 KEGG: dia:Dtpsy_3494 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004128988.1 KEGG: ajs:Ajs_4138 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_004128989.1 KEGG: aav:Aave_1937 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004128990.1 PFAM: FAD dependent oxidoreductase; KEGG: vap:Vapar_1545 D-amino-acid dehydrogenase YP_004128991.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_1935 LysR family transcriptional regulator YP_004128992.1 KEGG: aav:Aave_1663 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004128993.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: aav:Aave_1662 D-aminopeptidase DppA YP_004128994.1 PFAM: peptidase S58 DmpA; KEGG: aav:Aave_1661 aminopeptidase DmpA YP_004128995.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1660 binding-protein-dependent transport systems inner membrane component YP_004128996.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1659 binding-protein-dependent transport systems inner membrane component YP_004128997.1 PFAM: extracellular solute-binding protein family 5; KEGG: aav:Aave_1658 extracellular solute-binding protein YP_004128998.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: aav:Aave_1657 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004128999.1 PFAM: peptidase T2 asparaginase 2; KEGG: aav:Aave_1656 asparaginase YP_004129000.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: aav:Aave_1655 RpiR family transcriptional regulator YP_004129001.1 PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_4139 extracellular solute-binding protein YP_004129002.1 KEGG: dia:Dtpsy_3542 YidC translocase/secretase; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_004129003.1 PFAM: protein of unknown function DUF37; KEGG: ajs:Ajs_4141 hypothetical protein YP_004129004.1 KEGG: dia:Dtpsy_3544 hypothetical protein YP_004129005.1 KEGG: vei:Veis_5015 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_004129006.1 manually curated; KEGG: see:SNSL254_p_0036 hypothetical protein YP_004129007.1 KEGG: reu:Reut_D6521 toprim; PFAM: hypothetical protein; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein YP_004129008.1 KEGG: bam:Bamb_6615 conjugal transfer protein YP_004129009.1 SMART: DNA topoisomerase I DNA-binding; Toprim sub domain-containing protein; DNA topoisomerase I ATP-binding; TIGRFAM: DNA topoisomerase III; KEGG: bam:Bamb_6614 DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein YP_004129010.1 KEGG: bam:Bamb_6613 conjugal transfer peptidase TraF; TIGRFAM: conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region YP_004129011.1 PFAM: TRAG family protein; KEGG: reu:Reut_D6525 conjugal transfer coupling protein TraG YP_004129012.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: reu:Reut_D6526 conjugal transfer relaxase TraI YP_004129013.1 KEGG: bam:Bamb_6610 conjugal transfer relaxosome component TraJ YP_004129014.1 KEGG: bam:Bamb_6609 TraK protein of DNA transfer system YP_004129015.1 KEGG: reu:Reut_D6529 conjugal transfer protein TraL YP_004129016.1 KEGG: bam:Bamb_6607 conjugal transfer protein TraM YP_004129017.1 KEGG: bam:Bamb_6606 hypothetical protein YP_004129018.1 KEGG: bam:Bamb_6605 conjugation protein TraO YP_004129019.1 KEGG: reu:Reut_D6443 hypothetical protein YP_004129020.1 TIGRFAM: parB-like partition protein; PFAM: KorB domain protein; ParB domain protein nuclease; KEGG: bam:Bamb_6603 ParB-like partition proteins; SMART: ParB domain protein nuclease YP_004129021.1 KEGG: bam:Bamb_6602 cobyrinic acid a,c-diamide synthase YP_004129022.1 KEGG: eba:p2D2 TrfB transcriptional repressor protein YP_004129023.1 KEGG: bam:Bamb_6601 hypothetical protein YP_004129024.1 KEGG: bam:Bamb_6600 hypothetical protein YP_004129025.1 KEGG: api:100160724 similar to glyoxylate reductase/hydroxypyruvate reductase YP_004129026.1 KEGG: bam:Bamb_6599 hypothetical protein YP_004129027.1 KEGG: bam:Bamb_6598 hypothetical protein YP_004129028.1 KEGG: bam:Bamb_6597 hypothetical protein YP_004129029.1 PFAM: antirestriction protein; KEGG: bam:Bamb_6596 antirestriction protein YP_004129030.1 KEGG: rme:Rmet_6068 transposase DNA binding site ISRme15; manually curated; PFAM: transposase IS3/IS911 family protein YP_004129031.1 KEGG: app:CAP2UW1_2427 thioesterase superfamily protein; manually curated; PFAM: thioesterase superfamily protein YP_004129032.1 PFAM: Integrase catalytic region; KEGG: tmz:Tmz1t_4040 hypothetical protein YP_004129033.1 KEGG: tmz:Tmz1t_3158 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004129034.1 KEGG: tmz:Tmz1t_4038 ankyrin YP_004129035.1 KEGG: tin:Tint_3241 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_004129036.1 KEGG: rme:Rmet_6342 antitoxin of a toxin/antitoxin system YP_004129037.1 PFAM: Resolvase domain; KEGG: rpf:Rpic12D_4479 resolvase domain protein YP_004129038.1 PFAM: transposase Tn3 family protein; KEGG: rpf:Rpic12D_4478 transposase Tn3 family protein YP_004129039.1 PFAM: transposase IS3/IS911 family protein; KEGG: sml:Smlt2414 ISXac3 like transposase for insertion sequence element YP_004129040.1 KEGG: ckr:CKR_2452 hypothetical protein; manually curated; PFAM: AAA-4 family protein YP_004129041.1 PFAM: Glutathione S-transferase domain; KEGG: bpt:Bpet1280 glutathione transferase YP_004129042.1 PFAM: regulatory protein TetR; KEGG: bpt:Bpet1592 TetR family transcriptional regulator YP_004129043.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_2977 short-chain dehydrogenase/reductase SDR YP_004129044.1 PFAM: Glutathione S-transferase domain; KEGG: xau:Xaut_2975 glutathione S-transferase domain-containing protein YP_004129045.1 PFAM: hypothetical protein; KEGG: bpy:Bphyt_5155 hypothetical protein YP_004129046.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rcu:RCOM_2149470 bacterioferritin comigratory protein, putative YP_004129047.1 KEGG: sjp:SJA_P1-00290 RelE/StbE-family addiction module toxin; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_004129048.1 KEGG: afr:AFE_1589 DNA-damage-inducible protein J; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin YP_004129049.1 PFAM: TrfA family protein; KEGG: bam:Bamb_6593 TrfA family protein YP_004129050.1 KEGG: bam:Bamb_6592 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004129051.1 KEGG: reu:Reut_D6501 conjugal transfer protein TrbA; PFAM: hypothetical protein; SMART: hypothetical protein YP_004129052.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: bam:Bamb_6635 conjugal transfer ATPase TrbB; SMART: AAA ATPase YP_004129053.1 PFAM: Conjugal transfer protein TrbC; KEGG: bam:Bamb_6634 conjugal transfer protein TrbC YP_004129054.1 KEGG: ajs:Ajs_4272 conjugal transfer protein TrbD YP_004129055.1 TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; KEGG: bam:Bamb_6632 conjugal transfer protein TrbE; SMART: AAA ATPase YP_004129056.1 KEGG: bam:Bamb_6631 conjugal transfer protein TrbF YP_004129057.1 KEGG: bam:Bamb_6630 conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX YP_004129058.1 KEGG: bam:Bamb_6629 conjugal transfer protein TrbH YP_004129059.1 PFAM: conjugation TrbI family protein; KEGG: bam:Bamb_6628 conjugal transfer protein TrbI YP_004129060.1 KEGG: bam:Bamb_6627 conjugal transfer protein TrbJ; TIGRFAM: P-type conjugative transfer protein TrbJ; PFAM: type IV secretion system family protein YP_004129061.1 KEGG: bam:Bamb_6626 entry exclusion protein TrbK YP_004129062.1 KEGG: bam:Bamb_6625 TrbL/VirB6 plasmid conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein YP_004129063.1 KEGG: bam:Bamb_6624 conjugal transfer protein TrbM YP_004129064.1 PFAM: Lytic transglycosylase catalytic; KEGG: bam:Bamb_6623 conjugal transfer protein TrbN YP_004129065.1 KEGG: bam:Bamb_6622 hypothetical protein YP_004129066.1 KEGG: bam:Bamb_6621 conjugal transfer protein TrbP YP_004129067.1 KEGG: ajs:Ajs_4259 hypothetical protein YP_004129068.1 PFAM: Resolvase domain; KEGG: tmz:Tmz1t_2147 resolvase domain protein YP_004129069.1 manually curated; TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: tmz:Tmz1t_2146 addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_004129070.1 PFAM: transposase Tn3 family protein; KEGG: tmz:Tmz1t_2145 transposase Tn3 family protein YP_004129071.1 PFAM: Integrase catalytic region; Transposase-like Mu; KEGG: rme:Rmet_4045 transposase YP_004129072.1 PFAM: TniB family protein; KEGG: tin:Tint_3210 TniB family protein YP_004129073.1 KEGG: bxe:Bxe_C1175 transposition protein TniQ YP_004129074.1 PFAM: Resolvase domain; KEGG: enc:ECL_A229 TniR protein YP_004129075.1 PFAM: MerE family protein; KEGG: enc:ECL_A230 mercury resistance protein MerE YP_004129076.1 TIGRFAM: mercuric resistence transcriptional repressor protein MerD; PFAM: regulatory protein MerR; KEGG: enc:ECL_A231 mercury repressor protein, MerD; SMART: regulatory protein MerR YP_004129077.1 KEGG: enc:ECL_A232 mercuric reductase; TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004129078.1 KEGG: enc:ECL_A233 mercury ion transport transmembrane protein MerF YP_004129079.1 KEGG: enc:ECL_A234 mercury ion transport protein periplasmic component MerP; TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein YP_004129080.1 PFAM: Mercuric transport protein MerT; KEGG: enc:ECL_A235 mercury ion transport integral membrane protein MerT YP_004129081.1 TIGRFAM: Hg+2-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: enc:ECL_A236 transcriptional regulator MerR; SMART: regulatory protein MerR YP_004129082.1 manually curated; KEGG: aba:Acid345_3707 hypothetical protein YP_004129083.1 KEGG: xcv:XCV2347 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004129084.1 KEGG: xcv:XCV2346 AraC family transcriptional regulator; PFAM: hypothetical protein; SMART: Helix-turn-helix, AraC domain YP_004129085.1 PFAM: DNA polymerase subunit beta; KEGG: tmz:Tmz1t_2148 DNA polymerase subunit beta YP_004129086.1 PFAM: hypothetical protein; KEGG: tmz:Tmz1t_2149 hypothetical protein YP_004129087.1 KEGG: bvi:Bcep1808_7240 hypothetical protein YP_004129088.1 KEGG: tmz:Tmz1t_2150 cupin 2 conserved barrel domain protein; manually curated; PFAM: Cupin 2 conserved barrel domain protein YP_004129089.1 KEGG: tmz:Tmz1t_2151 hypothetical protein YP_004129090.1 KEGG: tmz:Tmz1t_2152 hypothetical protein YP_004129091.1 KEGG: tmz:Tmz1t_2153 hypothetical protein YP_004129092.1 PFAM: Resolvase domain; Resolvase hypothetical protein; KEGG: tmz:Tmz1t_2154 resolvase domain protein