-- dump date 20240506_063726 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP025281.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP025281.1.REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623xREFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and NanoporeREFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 2 of 12REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 2 of 12 Pseudo Genes (incomplete) :: 11 of 12REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 2 of 12 Pseudo Genes (incomplete) :: 11 of 12 Pseudo Genes (internal stop) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 2 of 12 Pseudo Genes (incomplete) :: 11 of 12 Pseudo Genes (internal stop) :: 0 of 12 Pseudo Genes (multiple problems) :: 1 of 12REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 2 of 12 Pseudo Genes (incomplete) :: 11 of 12 Pseudo Genes (internal stop) :: 0 of 12 Pseudo Genes (multiple problems) :: 1 of 12 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP025281.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.8 Genome Coverage :: 623x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/09/2024 01:18:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,735 CDSs (total) :: 4,634 Genes (coding) :: 4,622 CDSs (with protein) :: 4,622 Genes (RNA) :: 101 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 2 of 12 Pseudo Genes (incomplete) :: 11 of 12 Pseudo Genes (internal stop) :: 0 of 12 Pseudo Genes (multiple problems) :: 1 of 12 ##Genome-Annotation-Data-END## COMPLETENESS: full length.