-- dump date 20140618_193347 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002539452.1 222102413 7380202 70..1296 1 NC_011981.1 replication protein A 1296 repA 7380202 repA Agrobacterium vitis S4 replication protein A YP_002539452.1 70 D 311402 CDS YP_002539453.1 222102414 7380204 1293..2306 1 NC_011981.1 replication protein B 2306 repB 7380204 repB Agrobacterium vitis S4 replication protein B YP_002539453.1 1293 D 311402 CDS YP_002539454.1 222102415 7380205 2470..3684 1 NC_011981.1 replication initiation protein RepC 3684 repC 7380205 repC Agrobacterium vitis S4 replication initiation protein RepC YP_002539454.1 2470 D 311402 CDS YP_002539455.1 222102416 7380206 complement(4003..5256) 1 NC_011981.1 Flavin-containing monooxygenase 5256 7380206 Avi_7004 Agrobacterium vitis S4 Flavin-containing monooxygenase YP_002539455.1 4003 R 311402 CDS YP_002539456.1 222102417 7380207 5807..7513 1 NC_011981.1 GGDEF family protein 7513 7380207 Avi_7005 Agrobacterium vitis S4 GGDEF family protein YP_002539456.1 5807 D 311402 CDS YP_002539457.1 222102418 7380208 complement(7955..9118) 1 NC_011981.1 phage integrase family protein 9118 7380208 Avi_7008 Agrobacterium vitis S4 phage integrase family protein YP_002539457.1 7955 R 311402 CDS YP_002539458.1 222102419 7380211 complement(11193..11645) 1 NC_011981.1 transcriptional regulator 11645 7380211 Avi_7013 Agrobacterium vitis S4 transcriptional regulator YP_002539458.1 11193 R 311402 CDS YP_002539459.1 222102420 7380212 complement(11936..12985) 1 NC_011981.1 malate dehydrogenase 12985 mdh 7380212 mdh Agrobacterium vitis S4 malate dehydrogenase YP_002539459.1 11936 R 311402 CDS YP_002539460.1 222102421 7380213 13283..14869 1 NC_011981.1 ABC transporter substrate binding protein (oligopeptide) 14869 7380213 Avi_7015 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002539460.1 13283 D 311402 CDS YP_002539461.1 222102422 7380214 14987..17008 1 NC_011981.1 hydantoin utilization protein 17008 hyuA 7380214 hyuA Agrobacterium vitis S4 hydantoin utilization protein YP_002539461.1 14987 D 311402 CDS YP_002539462.1 222102423 7380215 17011..18726 1 NC_011981.1 hydantoin utilization protein 18726 hyuB 7380215 hyuB Agrobacterium vitis S4 hydantoin utilization protein YP_002539462.1 17011 D 311402 CDS YP_002539463.1 222102424 7380216 18723..19625 1 NC_011981.1 peptide ABC transporter permease 19625 dppC 7380216 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002539463.1 18723 D 311402 CDS YP_002539464.1 222102425 7380217 19628..20629 1 NC_011981.1 peptide ABC transporter permease 20629 dppB 7380217 dppB Agrobacterium vitis S4 peptide ABC transporter permease YP_002539464.1 19628 D 311402 CDS YP_002539465.1 222102426 7380218 20632..21648 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 21648 7380218 Avi_7020 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539465.1 20632 D 311402 CDS YP_002539466.1 222102427 7380219 21645..22625 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 22625 7380219 Avi_7021 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539466.1 21645 D 311402 CDS YP_002539467.1 222102428 7380220 22680..23708 1 NC_011981.1 hypothetical protein 23708 7380220 Avi_7022 Agrobacterium vitis S4 hypothetical protein YP_002539467.1 22680 D 311402 CDS YP_002539468.1 222102429 7380223 complement(24717..25697) 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 25697 7380223 Avi_7026 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539468.1 24717 R 311402 CDS YP_002539469.1 222102430 7380224 complement(25694..26662) 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 26662 7380224 Avi_7027 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539469.1 25694 R 311402 CDS YP_002539470.1 222102431 7380225 complement(26664..27590) 1 NC_011981.1 peptide ABC transporter permease 27590 7380225 Avi_7028 Agrobacterium vitis S4 peptide ABC transporter permease YP_002539470.1 26664 R 311402 CDS YP_002539471.1 222102432 7380226 complement(27595..28518) 1 NC_011981.1 peptide ABC transporter permease 28518 7380226 Avi_7029 Agrobacterium vitis S4 peptide ABC transporter permease YP_002539471.1 27595 R 311402 CDS YP_002539472.1 222102433 7380227 complement(28572..30185) 1 NC_011981.1 ABC transporter substrate binding protein (oligopeptide) 30185 7380227 Avi_7030 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002539472.1 28572 R 311402 CDS YP_002539473.1 222102434 7380228 30546..31193 1 NC_011981.1 TetR family transcriptional regulator 31193 7380228 Avi_7032 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002539473.1 30546 D 311402 CDS YP_002539474.1 222102435 7380229 31376..31669 1 NC_011981.1 hypothetical protein 31669 7380229 Avi_7033 Agrobacterium vitis S4 hypothetical protein YP_002539474.1 31376 D 311402 CDS YP_002539475.1 222102436 7380230 complement(31828..33282) 1 NC_011981.1 hypothetical cytosolic protein 33282 7380230 Avi_7034 Agrobacterium vitis S4 hypothetical cytosolic protein YP_002539475.1 31828 R 311402 CDS YP_002539476.1 222102437 7380231 33780..35495 1 NC_011981.1 ParB family; plasmid partitioning protein 35495 parB 7380231 parB Agrobacterium vitis S4 plasmid partitioning protein YP_002539476.1 33780 D 311402 CDS YP_002539477.1 222102438 7380232 35577..36239 1 NC_011981.1 hypothetical protein 36239 7380232 Avi_7036 Agrobacterium vitis S4 hypothetical protein YP_002539477.1 35577 D 311402 CDS YP_002539478.1 222102439 7380233 36664..37509 1 NC_011981.1 hypothetical protein 37509 7380233 Avi_7038 Agrobacterium vitis S4 hypothetical protein YP_002539478.1 36664 D 311402 CDS YP_002539479.1 222102440 7380234 complement(37605..38432) 1 NC_011981.1 short chain dehydrogenase 38432 7380234 Avi_7039 Agrobacterium vitis S4 short chain dehydrogenase YP_002539479.1 37605 R 311402 CDS YP_002539480.1 222102441 7380235 38508..39440 1 NC_011981.1 AraC family transcriptional regulator 39440 7380235 Avi_7040 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002539480.1 38508 D 311402 CDS YP_002539481.1 222102442 7380236 complement(39527..39943) 1 NC_011981.1 hypothetical protein 39943 7380236 Avi_7041 Agrobacterium vitis S4 hypothetical protein YP_002539481.1 39527 R 311402 CDS YP_002539482.1 222102443 7380237 complement(40213..40491) 1 NC_011981.1 HNS-type DNA binding protein 40491 hupT 7380237 hupT Agrobacterium vitis S4 HNS-type DNA binding protein YP_002539482.1 40213 R 311402 CDS YP_002539483.1 222102444 7380238 40592..41044 1 NC_011981.1 transposase 41044 7380238 Avi_7043 Agrobacterium vitis S4 transposase YP_002539483.1 40592 D 311402 CDS YP_002539484.1 222102445 7380239 41041..41394 1 NC_011981.1 transposase 41394 7380239 Avi_7044 Agrobacterium vitis S4 transposase YP_002539484.1 41041 D 311402 CDS YP_002539485.1 222102446 7380240 41440..43098 1 NC_011981.1 transposase 43098 7380240 Avi_7045 Agrobacterium vitis S4 transposase YP_002539485.1 41440 D 311402 CDS YP_002539486.1 222102447 7380028 complement(43079..43312) 1 NC_011981.1 transposase 43312 7380028 Avi_7046 Agrobacterium vitis S4 transposase YP_002539486.1 43079 R 311402 CDS YP_002539487.1 222102448 7380111 complement(43451..43663) 1 NC_011981.1 hypothetical protein 43663 7380111 Avi_7047 Agrobacterium vitis S4 hypothetical protein YP_002539487.1 43451 R 311402 CDS YP_002539488.1 222102449 7380112 complement(43932..44465) 1 NC_011981.1 hypothetical protein 44465 7380112 Avi_7050 Agrobacterium vitis S4 hypothetical protein YP_002539488.1 43932 R 311402 CDS YP_002539489.1 222102450 7380113 complement(44560..45033) 1 NC_011981.1 hypothetical protein 45033 7380113 Avi_7051 Agrobacterium vitis S4 hypothetical protein YP_002539489.1 44560 R 311402 CDS YP_002539490.1 222102451 7380114 complement(45038..46090) 1 NC_011981.1 hypothetical protein 46090 7380114 Avi_7052 Agrobacterium vitis S4 hypothetical protein YP_002539490.1 45038 R 311402 CDS YP_002539491.1 222102452 7380115 complement(46095..47153) 1 NC_011981.1 hypothetical protein 47153 7380115 Avi_7053 Agrobacterium vitis S4 hypothetical protein YP_002539491.1 46095 R 311402 CDS YP_002539492.1 222102453 7380116 complement(47162..48556) 1 NC_011981.1 hypothetical protein 48556 7380116 Avi_7054 Agrobacterium vitis S4 hypothetical protein YP_002539492.1 47162 R 311402 CDS YP_002539493.1 222102454 7380117 complement(48553..49623) 1 NC_011981.1 hypothetical protein 49623 7380117 Avi_7055 Agrobacterium vitis S4 hypothetical protein YP_002539493.1 48553 R 311402 CDS YP_002539494.1 222102455 7380118 complement(49634..51859) 1 NC_011981.1 vgrG protein 51859 vgrG 7380118 vgrG Agrobacterium vitis S4 vgrG protein YP_002539494.1 49634 R 311402 CDS YP_002539495.1 222102456 7380119 complement(52241..52570) 1 NC_011981.1 hypothetical protein 52570 7380119 Avi_7057 Agrobacterium vitis S4 hypothetical protein YP_002539495.1 52241 R 311402 CDS YP_002539496.1 222102457 7380120 complement(52567..52872) 1 NC_011981.1 hypothetical protein 52872 7380120 Avi_7058 Agrobacterium vitis S4 hypothetical protein YP_002539496.1 52567 R 311402 CDS YP_002539497.1 222102458 7380121 complement(53348..55315) 1 NC_011981.1 VirD4 family; conjugal transfer coupling protein TraG 55315 traG 7380121 traG Agrobacterium vitis S4 conjugal transfer coupling protein TraG YP_002539497.1 53348 R 311402 CDS YP_002539498.1 222102459 7380122 complement(55302..55547) 1 NC_011981.1 conjugal transfer protein TraD 55547 traD 7380122 traD Agrobacterium vitis S4 conjugal transfer protein TraD YP_002539498.1 55302 R 311402 CDS YP_002539499.1 222102460 7380123 complement(55522..55818) 1 NC_011981.1 conjugal transfer protein Dtr system 55818 traC 7380123 traC Agrobacterium vitis S4 conjugal transfer protein Dtr system YP_002539499.1 55522 R 311402 CDS YP_002539500.1 222102461 7380124 56074..59376 1 NC_011981.1 conjugal transfer system TraA; oriT nicking enzyme; Dtr system oriT relaxase 59376 traA 7380124 traA Agrobacterium vitis S4 Dtr system oriT relaxase YP_002539500.1 56074 D 311402 CDS YP_002539501.1 222102462 7380125 59394..59903 1 NC_011981.1 conjugal transfer pilin processing protease TraF 59903 traF 7380125 traF Agrobacterium vitis S4 conjugal transfer pilin processing protease TraF YP_002539501.1 59394 D 311402 CDS YP_002539502.1 222102463 7380126 59974..61059 1 NC_011981.1 conjugal transfer protein TraB 61059 traB 7380126 traB Agrobacterium vitis S4 conjugal transfer protein TraB YP_002539502.1 59974 D 311402 CDS YP_002539503.1 222102464 7380127 61071..61721 1 NC_011981.1 conjugal transfer protein TraH 61721 traH 7380127 traH Agrobacterium vitis S4 conjugal transfer protein TraH YP_002539503.1 61071 D 311402 CDS YP_002539504.1 222102465 7380128 62486..63337 1 NC_011981.1 AraC family transcriptional regulator 63337 7380128 Avi_7070 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002539504.1 62486 D 311402 CDS YP_002539505.1 222102466 7380129 63440..64354 1 NC_011981.1 hypothetical protein 64354 7380129 Avi_7072 Agrobacterium vitis S4 hypothetical protein YP_002539505.1 63440 D 311402 CDS YP_002539506.1 222102467 7380130 64988..65404 1 NC_011981.1 transcriptional regulator 65404 7380130 Avi_7073 Agrobacterium vitis S4 transcriptional regulator YP_002539506.1 64988 D 311402 CDS YP_002539507.1 222102468 7380131 complement(65523..66239) 1 NC_011981.1 transposase 66239 7380131 Avi_7074 Agrobacterium vitis S4 transposase YP_002539507.1 65523 R 311402 CDS YP_002539508.1 222102469 7380132 complement(66567..67679) 1 NC_011981.1 major facilitator family transporter 67679 7380132 Avi_7075 Agrobacterium vitis S4 major facilitator family transporter YP_002539508.1 66567 R 311402 CDS YP_002539509.1 222102470 7380133 complement(67729..68790) 1 NC_011981.1 zinc-binding dehydrogenase 68790 7380133 Avi_7076 Agrobacterium vitis S4 zinc-binding dehydrogenase YP_002539509.1 67729 R 311402 CDS YP_002539510.1 222102471 7380134 complement(69237..69911) 1 NC_011981.1 hypothetical protein 69911 menG 7380134 menG Agrobacterium vitis S4 hypothetical protein YP_002539510.1 69237 R 311402 CDS YP_002539511.1 222102472 7380135 complement(69942..70892) 1 NC_011981.1 D-3-phosphoglycerate dehydrogenase 70892 serA 7380135 serA Agrobacterium vitis S4 D-3-phosphoglycerate dehydrogenase YP_002539511.1 69942 R 311402 CDS YP_002539512.1 222102473 7380136 71096..71791 1 NC_011981.1 Transcriptional regulator 71791 7380136 Avi_7080 Agrobacterium vitis S4 Transcriptional regulator YP_002539512.1 71096 D 311402 CDS YP_002539513.1 222102474 7380137 71843..72802 1 NC_011981.1 hypothetical protein 72802 7380137 Avi_7081 Agrobacterium vitis S4 hypothetical protein YP_002539513.1 71843 D 311402 CDS YP_002539514.1 222102475 7380138 72799..73260 1 NC_011981.1 hypothetical protein 73260 7380138 Avi_7082 Agrobacterium vitis S4 hypothetical protein YP_002539514.1 72799 D 311402 CDS YP_002539515.1 222102476 7380139 73292..74800 1 NC_011981.1 hypothetical protein 74800 7380139 Avi_7083 Agrobacterium vitis S4 hypothetical protein YP_002539515.1 73292 D 311402 CDS YP_002539516.1 222102477 7380140 74891..76069 1 NC_011981.1 dehydrogenase 76069 7380140 Avi_7084 Agrobacterium vitis S4 dehydrogenase YP_002539516.1 74891 D 311402 CDS YP_002539517.1 222102478 7380141 complement(76152..76820) 1 NC_011981.1 transposase 76820 7380141 Avi_7085 Agrobacterium vitis S4 transposase YP_002539517.1 76152 R 311402 CDS YP_002539518.1 222102479 7380142 complement(76852..77577) 1 NC_011981.1 TetR family transcriptional regulator 77577 ameR 7380142 ameR Agrobacterium vitis S4 TetR family transcriptional regulator YP_002539518.1 76852 R 311402 CDS YP_002539519.1 222102480 7380143 77781..79088 1 NC_011981.1 ABC transporter substrate-binding protein 79088 7380143 Avi_7087 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002539519.1 77781 D 311402 CDS YP_002539520.1 222102481 7380144 79081..79842 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (ribose) 79842 rbsA 7380144 rbsA Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (ribose) YP_002539520.1 79081 D 311402 CDS YP_002539521.1 222102482 7380145 79820..80524 1 NC_011981.1 ABC transporter ATPase 80524 7380145 Avi_7089 Agrobacterium vitis S4 ABC transporter ATPase YP_002539521.1 79820 D 311402 CDS YP_002539522.1 222102483 7380146 80521..81390 1 NC_011981.1 urea/amide ABC transporter permease 81390 7380146 Avi_7090 Agrobacterium vitis S4 urea/amide ABC transporter permease YP_002539522.1 80521 D 311402 CDS YP_002539523.1 222102484 7380147 81387..82346 1 NC_011981.1 ABC transporter ATPase 82346 7380147 Avi_7091 Agrobacterium vitis S4 ABC transporter ATPase YP_002539523.1 81387 D 311402 CDS YP_002539524.1 222102485 7380148 82343..83800 1 NC_011981.1 amidase 83800 7380148 Avi_7092 Agrobacterium vitis S4 amidase YP_002539524.1 82343 D 311402 CDS YP_002539525.1 222102486 7380149 83891..84262 1 NC_011981.1 transposase 84262 7380149 Avi_7093 Agrobacterium vitis S4 transposase YP_002539525.1 83891 D 311402 CDS YP_002539526.1 222102487 7380150 84346..84654 1 NC_011981.1 transposase 84654 7380150 Avi_7095 Agrobacterium vitis S4 transposase YP_002539526.1 84346 D 311402 CDS YP_002539527.1 222102488 7380151 84694..85212 1 NC_011981.1 hypothetical protein 85212 7380151 Avi_7096 Agrobacterium vitis S4 hypothetical protein YP_002539527.1 84694 D 311402 CDS YP_002539528.1 222102489 7380152 complement(85515..86114) 1 NC_011981.1 RhtB family transporter 86114 rhtB 7380152 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002539528.1 85515 R 311402 CDS YP_002539529.1 222102490 7380153 complement(86119..86688) 1 NC_011981.1 hypothetical protein 86688 7380153 Avi_7100 Agrobacterium vitis S4 hypothetical protein YP_002539529.1 86119 R 311402 CDS YP_002539530.1 222102491 7380155 complement(87943..88314) 1 NC_011981.1 Transposase and inactivated derivatives IS5 family 88314 7380155 Avi_7103 Agrobacterium vitis S4 Transposase and inactivated derivatives IS5 family YP_002539530.1 87943 R 311402 CDS YP_002539531.1 222102492 7380156 complement(88356..88640) 1 NC_011981.1 hypothetical protein 88640 7380156 Avi_7104 Agrobacterium vitis S4 hypothetical protein YP_002539531.1 88356 R 311402 CDS YP_002539532.1 222102493 7380157 88930..90174 1 NC_011981.1 phosphoenolpyruvate synthase-related protein 90174 7380157 Avi_7106 Agrobacterium vitis S4 phosphoenolpyruvate synthase-related protein YP_002539532.1 88930 D 311402 CDS YP_002539533.1 222102494 7380158 90249..91325 1 NC_011981.1 hypothetical protein 91325 7380158 Avi_7108 Agrobacterium vitis S4 hypothetical protein YP_002539533.1 90249 D 311402 CDS YP_002539534.1 222102495 7380159 91322..91936 1 NC_011981.1 hypothetical protein 91936 7380159 Avi_7109 Agrobacterium vitis S4 hypothetical protein YP_002539534.1 91322 D 311402 CDS YP_002539535.1 222102496 7380160 91936..92706 1 NC_011981.1 transferase 92706 7380160 Avi_7110 Agrobacterium vitis S4 transferase YP_002539535.1 91936 D 311402 CDS YP_002539536.1 222102497 7380161 92703..93350 1 NC_011981.1 RhtB family transporter 93350 rhtB 7380161 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002539536.1 92703 D 311402 CDS YP_002539537.1 222102498 7380162 93419..94009 1 NC_011981.1 hypothetical protein 94009 7380162 Avi_7112 Agrobacterium vitis S4 hypothetical protein YP_002539537.1 93419 D 311402 CDS YP_002539538.1 222102499 7380163 complement(94454..95137) 1 NC_011981.1 transposase 95137 7380163 Avi_7114 Agrobacterium vitis S4 transposase YP_002539538.1 94454 R 311402 CDS YP_002539539.1 222102500 7380164 complement(95236..95781) 1 NC_011981.1 transposase 95781 7380164 Avi_7117 Agrobacterium vitis S4 transposase YP_002539539.1 95236 R 311402 CDS YP_002539540.1 222102501 7380165 complement(95854..96180) 1 NC_011981.1 transposase 96180 7380165 Avi_7120 Agrobacterium vitis S4 transposase YP_002539540.1 95854 R 311402 CDS YP_002539541.1 222102502 7380166 complement(96351..97313) 1 NC_011981.1 LysR family transcriptional regulator 97313 7380166 Avi_7121 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002539541.1 96351 R 311402 CDS YP_002539542.1 222102503 7380167 complement(97429..98709) 1 NC_011981.1 MFS permease 98709 7380167 Avi_7122 Agrobacterium vitis S4 MFS permease YP_002539542.1 97429 R 311402 CDS YP_002539543.1 222102504 7380168 complement(98742..99611) 1 NC_011981.1 D-N-carbamoylase 99611 7380168 Avi_7123 Agrobacterium vitis S4 D-N-carbamoylase YP_002539543.1 98742 R 311402 CDS YP_002539544.1 222102505 7380169 complement(99745..100434) 1 NC_011981.1 hydrolase 100434 7380169 Avi_7125 Agrobacterium vitis S4 hydrolase YP_002539544.1 99745 R 311402 CDS YP_002539545.1 222102506 7380170 100680..101783 1 NC_011981.1 hypothetical protein 101783 7380170 Avi_7126 Agrobacterium vitis S4 hypothetical protein YP_002539545.1 100680 D 311402 CDS YP_002539546.1 222102507 7380171 complement(102052..103362) 1 NC_011981.1 hypothetical protein 103362 7380171 Avi_7127 Agrobacterium vitis S4 hypothetical protein YP_002539546.1 102052 R 311402 CDS YP_002539547.1 222102508 7380172 103570..104073 1 NC_011981.1 flavoprotein oxidoreductase 104073 7380172 Avi_7128 Agrobacterium vitis S4 flavoprotein oxidoreductase YP_002539547.1 103570 D 311402 CDS YP_002539548.1 222102509 7380173 104155..105462 1 NC_011981.1 ABC transporter substrate binding protein (spermidine/putrescine) 105462 7380173 Avi_7129 Agrobacterium vitis S4 ABC transporter substrate binding protein (spermidine/putrescine) YP_002539548.1 104155 D 311402 CDS YP_002539549.1 222102510 7380174 105491..106360 1 NC_011981.1 spermidine/putrescine ABC transporter permease 106360 7380174 Avi_7130 Agrobacterium vitis S4 spermidine/putrescine ABC transporter permease YP_002539549.1 105491 D 311402 CDS YP_002539550.1 222102511 7380175 106364..107209 1 NC_011981.1 spermidine/putrescine ABC transporter permease 107209 7380175 Avi_7131 Agrobacterium vitis S4 spermidine/putrescine ABC transporter permease YP_002539550.1 106364 D 311402 CDS YP_002539551.1 222102512 7380176 107237..108310 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (spermidine/putrescine) 108310 7380176 Avi_7132 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (spermidine/putrescine) YP_002539551.1 107237 D 311402 CDS YP_002539552.1 222102513 7380177 complement(108406..109317) 1 NC_011981.1 Integrase catalytic core 109317 7380177 Avi_7134 Agrobacterium vitis S4 Integrase catalytic core YP_002539552.1 108406 R 311402 CDS YP_002539553.1 222102514 7380178 complement(109395..109688) 1 NC_011981.1 hypothetical protein 109688 7380178 Avi_7135 Agrobacterium vitis S4 hypothetical protein YP_002539553.1 109395 R 311402 CDS YP_002539554.1 222102515 7380179 complement(109685..109978) 1 NC_011981.1 hypothetical protein 109978 7380179 Avi_7136 Agrobacterium vitis S4 hypothetical protein YP_002539554.1 109685 R 311402 CDS YP_002539555.1 222102516 7380180 110468..110992 1 NC_011981.1 AraC family transcriptional regulator 110992 7380180 Avi_7140 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002539555.1 110468 D 311402 CDS YP_002539556.1 222102517 7380181 111121..111663 1 NC_011981.1 hypothetical protein 111663 7380181 Avi_7142 Agrobacterium vitis S4 hypothetical protein YP_002539556.1 111121 D 311402 CDS YP_002539557.1 222102518 7380182 complement(112177..113175) 1 NC_011981.1 OmpA family protein 113175 7380182 Avi_7144 Agrobacterium vitis S4 OmpA family protein YP_002539557.1 112177 R 311402 CDS YP_002539558.1 222102519 7380183 114361..114690 1 NC_011981.1 Restriction endonuclease 114690 7380183 Avi_7146 Agrobacterium vitis S4 Restriction endonuclease YP_002539558.1 114361 D 311402 CDS YP_002539559.1 222102520 7380184 complement(114792..115490) 1 NC_011981.1 transposase 115490 7380184 Avi_7148 Agrobacterium vitis S4 transposase YP_002539559.1 114792 R 311402 CDS YP_002539560.1 222102521 7380185 115974..117344 1 NC_011981.1 P-450 monooxygenase 117344 virH2 7380185 virH2 Agrobacterium vitis S4 P-450 monooxygenase YP_002539560.1 115974 D 311402 CDS YP_002539561.1 222102522 7380186 117341..118090 1 NC_011981.1 methyltransferase 118090 7380186 Avi_7150 Agrobacterium vitis S4 methyltransferase YP_002539561.1 117341 D 311402 CDS YP_002539562.1 222102523 7380187 118131..118826 1 NC_011981.1 hypothetical protein 118826 7380187 Avi_7151 Agrobacterium vitis S4 hypothetical protein YP_002539562.1 118131 D 311402 CDS YP_002539563.1 222102524 7380188 118848..119786 1 NC_011981.1 sulfotransferase 119786 7380188 Avi_7152 Agrobacterium vitis S4 sulfotransferase YP_002539563.1 118848 D 311402 CDS YP_002539564.1 222102525 7380189 complement(119889..120803) 1 NC_011981.1 hypothetical protein 120803 7380189 Avi_7153 Agrobacterium vitis S4 hypothetical protein YP_002539564.1 119889 R 311402 CDS YP_002539565.1 222102526 7380190 complement(121123..121797) 1 NC_011981.1 transposase 121797 7380190 Avi_7154 Agrobacterium vitis S4 transposase YP_002539565.1 121123 R 311402 CDS YP_002539566.1 222102527 7380191 122247..123653 1 NC_011981.1 nitrilotriacetate monooxygenase 123653 7380191 Avi_7155 Agrobacterium vitis S4 nitrilotriacetate monooxygenase YP_002539566.1 122247 D 311402 CDS YP_002539567.1 222102528 7380192 123779..124573 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) 124573 7380192 Avi_7156 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) YP_002539567.1 123779 D 311402 CDS YP_002539568.1 222102529 7380203 124570..125451 1 NC_011981.1 branched-chain amino acid ABC transporter permease 125451 7380203 Avi_7157 Agrobacterium vitis S4 branched-chain amino acid ABC transporter permease YP_002539568.1 124570 D 311402 CDS YP_002539569.1 222102530 7380324 125455..126507 1 NC_011981.1 branched-chain amino acid ABC transporter permease 126507 7380324 Avi_7158 Agrobacterium vitis S4 branched-chain amino acid ABC transporter permease YP_002539569.1 125455 D 311402 CDS YP_002539570.1 222102531 7380325 126525..127853 1 NC_011981.1 hypothetical protein 127853 7380325 Avi_7159 Agrobacterium vitis S4 hypothetical protein YP_002539570.1 126525 D 311402 CDS YP_002539571.1 222102532 7380326 127916..129265 1 NC_011981.1 hypothetical protein 129265 7380326 Avi_7160 Agrobacterium vitis S4 hypothetical protein YP_002539571.1 127916 D 311402 CDS YP_002539572.1 222102533 7380327 129417..130217 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) 130217 7380327 Avi_7161 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) YP_002539572.1 129417 D 311402 CDS YP_002539573.1 222102534 7380328 130257..131483 1 NC_011981.1 thermophilic desulfurizing enzyme 131483 7380328 Avi_7162 Agrobacterium vitis S4 thermophilic desulfurizing enzyme YP_002539573.1 130257 D 311402 CDS YP_002539574.1 222102535 7380329 131638..132648 1 NC_011981.1 taurine ABC transporter periplasmic binding protein 132648 tauA 7380329 tauA Agrobacterium vitis S4 taurine ABC transporter periplasmic binding protein YP_002539574.1 131638 D 311402 CDS YP_002539575.1 222102536 7380330 132716..133507 1 NC_011981.1 ABC transporter ATPase 133507 7380330 Avi_7165 Agrobacterium vitis S4 ABC transporter ATPase YP_002539575.1 132716 D 311402 CDS YP_002539576.1 222102537 7380331 133570..134355 1 NC_011981.1 taurine uptake ABC transporter permease protein 134355 7380331 Avi_7166 Agrobacterium vitis S4 taurine uptake ABC transporter permease protein YP_002539576.1 133570 D 311402 CDS YP_002539577.1 222102538 7380332 complement(134438..135508) 1 NC_011981.1 sulfonate monooxygenase 135508 ssuD 7380332 ssuD Agrobacterium vitis S4 sulfonate monooxygenase YP_002539577.1 134438 R 311402 CDS YP_002539578.1 222102539 7380333 complement(135594..136652) 1 NC_011981.1 hypothetical protein 136652 7380333 Avi_7168 Agrobacterium vitis S4 hypothetical protein YP_002539578.1 135594 R 311402 CDS YP_002539579.1 222102540 7380334 complement(136667..137269) 1 NC_011981.1 hypothetical protein 137269 7380334 Avi_7169 Agrobacterium vitis S4 hypothetical protein YP_002539579.1 136667 R 311402 CDS YP_002539580.1 222102541 7380335 complement(137282..137860) 1 NC_011981.1 hypothetical protein 137860 7380335 Avi_7170 Agrobacterium vitis S4 hypothetical protein YP_002539580.1 137282 R 311402 CDS YP_002539581.1 222102542 7380336 complement(137893..138939) 1 NC_011981.1 monooxygenase 138939 7380336 Avi_7171 Agrobacterium vitis S4 monooxygenase YP_002539581.1 137893 R 311402 CDS YP_002539582.1 222102543 7380337 complement(138936..140579) 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 140579 7380337 Avi_7172 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539582.1 138936 R 311402 CDS YP_002539583.1 222102544 7380338 complement(140576..141454) 1 NC_011981.1 peptide ABC transporter permease 141454 dppC 7380338 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002539583.1 140576 R 311402 CDS YP_002539584.1 222102545 7380339 complement(141451..142395) 1 NC_011981.1 peptide ABC transporter permease 142395 dppB 7380339 dppB Agrobacterium vitis S4 peptide ABC transporter permease YP_002539584.1 141451 R 311402 CDS YP_002539585.1 222102546 7380340 complement(142458..144089) 1 NC_011981.1 ABC transporter substrate binding protein (oligopeptide) 144089 7380340 Avi_7175 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002539585.1 142458 R 311402 CDS YP_002539586.1 222102547 7380341 complement(144788..145972) 1 NC_011981.1 acyl-CoA dehydrogenase 145972 acd 7380341 acd Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002539586.1 144788 R 311402 CDS YP_002539587.1 222102548 7380342 complement(145969..147003) 1 NC_011981.1 desulfurizing enzyme 147003 7380342 Avi_7180 Agrobacterium vitis S4 desulfurizing enzyme YP_002539587.1 145969 R 311402 CDS YP_002539588.1 222102549 7380343 complement(147070..148698) 1 NC_011981.1 ABC transporter substrate binding protein (oligopeptide) 148698 7380343 Avi_7181 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002539588.1 147070 R 311402 CDS YP_002539589.1 222102550 7380344 148964..149953 1 NC_011981.1 peptide ABC transporter permease 149953 7380344 Avi_7182 Agrobacterium vitis S4 peptide ABC transporter permease YP_002539589.1 148964 D 311402 CDS YP_002539590.1 222102551 7380345 149950..150957 1 NC_011981.1 peptide ABC transporter permease 150957 7380345 Avi_7183 Agrobacterium vitis S4 peptide ABC transporter permease YP_002539590.1 149950 D 311402 CDS YP_002539591.1 222102552 7380346 150954..151952 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 151952 7380346 Avi_7185 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539591.1 150954 D 311402 CDS YP_002539592.1 222102553 7380347 151930..152871 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 152871 7380347 Avi_7187 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539592.1 151930 D 311402 CDS YP_002539593.1 222102554 7380348 152887..153936 1 NC_011981.1 aldo/keto reductase 153936 7380348 Avi_7188 Agrobacterium vitis S4 aldo/keto reductase YP_002539593.1 152887 D 311402 CDS YP_002539594.1 222102555 7380349 153997..155235 1 NC_011981.1 acyl-CoA dehydrogenase 155235 acd 7380349 acd Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002539594.1 153997 D 311402 CDS YP_002539595.1 222102556 7380350 complement(155286..156047) 1 NC_011981.1 Nitroreductase 156047 7380350 Avi_7190 Agrobacterium vitis S4 Nitroreductase YP_002539595.1 155286 R 311402 CDS YP_002539596.1 222102557 7380351 complement(156158..157852) 1 NC_011981.1 ABC transporter ATPase 157852 7380351 Avi_7191 Agrobacterium vitis S4 ABC transporter ATPase YP_002539596.1 156158 R 311402 CDS YP_002539597.1 222102558 7380352 complement(157849..158775) 1 NC_011981.1 peptide ABC transporter permease 158775 7380352 Avi_7192 Agrobacterium vitis S4 peptide ABC transporter permease YP_002539597.1 157849 R 311402 CDS YP_002539598.1 222102559 7380353 complement(158780..159760) 1 NC_011981.1 peptide ABC transporter permease 159760 7380353 Avi_7193 Agrobacterium vitis S4 peptide ABC transporter permease YP_002539598.1 158780 R 311402 CDS YP_002539599.1 222102560 7380354 complement(159867..161453) 1 NC_011981.1 ABC transporter substrate binding protein (oligopeptide) 161453 7380354 Avi_7194 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002539599.1 159867 R 311402 CDS YP_002539600.1 222102561 7380355 complement(161669..163000) 1 NC_011981.1 monooxygenase 163000 7380355 Avi_7195 Agrobacterium vitis S4 monooxygenase YP_002539600.1 161669 R 311402 CDS YP_002539601.1 222102562 7380356 complement(163043..163828) 1 NC_011981.1 sulfate ester transporter permease protein 163828 7380356 Avi_7196 Agrobacterium vitis S4 sulfate ester transporter permease protein YP_002539601.1 163043 R 311402 CDS YP_002539602.1 222102563 7380357 complement(163831..164649) 1 NC_011981.1 aliphatic sulfonate ABC transporter permease 164649 7380357 Avi_7197 Agrobacterium vitis S4 aliphatic sulfonate ABC transporter permease YP_002539602.1 163831 R 311402 CDS YP_002539603.1 222102564 7380358 complement(164673..165746) 1 NC_011981.1 ABC transporter substrate binding protein (aliphatic sulfonate) 165746 7380358 Avi_7198 Agrobacterium vitis S4 ABC transporter substrate binding protein (aliphatic sulfonate) YP_002539603.1 164673 R 311402 CDS YP_002539604.1 222102565 7380359 complement(165813..166649) 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (nitrate/sulfonates) 166649 ssuB 7380359 ssuB Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (nitrate/sulfonates) YP_002539604.1 165813 R 311402 CDS YP_002539605.1 222102566 7380360 complement(166775..168115) 1 NC_011981.1 nitrilotriacetate monooxygenase 168115 7380360 Avi_7200 Agrobacterium vitis S4 nitrilotriacetate monooxygenase YP_002539605.1 166775 R 311402 CDS YP_002539606.1 222102567 7380361 complement(168138..169769) 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (peptide) 169769 7380361 Avi_7201 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (peptide) YP_002539606.1 168138 R 311402 CDS YP_002539607.1 222102568 7380362 complement(169766..170638) 1 NC_011981.1 peptide ABC transporter permease 170638 dppC 7380362 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002539607.1 169766 R 311402 CDS YP_002539608.1 222102569 7380363 complement(170635..171681) 1 NC_011981.1 peptide ABC transporter permease 171681 7380363 Avi_7203 Agrobacterium vitis S4 peptide ABC transporter permease YP_002539608.1 170635 R 311402 CDS YP_002539609.1 222102570 7380365 complement(175062..176063) 1 NC_011981.1 hypothetical protein 176063 7380365 Avi_7206 Agrobacterium vitis S4 hypothetical protein YP_002539609.1 175062 R 311402 CDS YP_002539610.1 222102571 7380366 176317..176943 1 NC_011981.1 acetyltransferase 176943 7380366 Avi_7207 Agrobacterium vitis S4 acetyltransferase YP_002539610.1 176317 D 311402 CDS YP_002539611.1 222102572 7380367 177000..178025 1 NC_011981.1 monooxygenase 178025 7380367 Avi_7208 Agrobacterium vitis S4 monooxygenase YP_002539611.1 177000 D 311402 CDS YP_002539612.1 222102573 7380368 178062..179063 1 NC_011981.1 hypothetical protein 179063 7380368 Avi_7209 Agrobacterium vitis S4 hypothetical protein YP_002539612.1 178062 D 311402 CDS YP_002539613.1 222102574 7380369 179082..180416 1 NC_011981.1 monooxygenase 180416 7380369 Avi_7210 Agrobacterium vitis S4 monooxygenase YP_002539613.1 179082 D 311402 CDS YP_002539614.1 222102575 7380370 complement(181186..182781) 1 NC_011981.1 ABC transporter substrate binding protein (oligopeptide) 182781 7380370 Avi_7212 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002539614.1 181186 R 311402 CDS YP_002539615.1 222102576 7380371 complement(182799..183137) 1 NC_011981.1 hypothetical protein 183137 7380371 Avi_7213 Agrobacterium vitis S4 hypothetical protein YP_002539615.1 182799 R 311402 CDS YP_002539616.1 222102577 7380372 complement(183191..184789) 1 NC_011981.1 ABC transporter substrate binding protein (oligopeptide) 184789 7380372 Avi_7214 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002539616.1 183191 R 311402 CDS YP_002539617.1 222102578 7380373 complement(184832..186025) 1 NC_011981.1 hippurate hydrolase 186025 7380373 Avi_7215 Agrobacterium vitis S4 hippurate hydrolase YP_002539617.1 184832 R 311402 CDS YP_002539618.1 222102579 7380374 complement(186111..187280) 1 NC_011981.1 monooxygenase 187280 7380374 Avi_7216 Agrobacterium vitis S4 monooxygenase YP_002539618.1 186111 R 311402 CDS YP_002539619.1 222102580 7380375 188026..188994 1 NC_011981.1 ABC transporter substrate binding protein (aliphatic sulfonate) 188994 7380375 Avi_7220 Agrobacterium vitis S4 ABC transporter substrate binding protein (aliphatic sulfonate) YP_002539619.1 188026 D 311402 CDS YP_002539620.1 222102581 7380376 189020..189868 1 NC_011981.1 nitrate/sulfonate ABC transporter permease 189868 7380376 Avi_7221 Agrobacterium vitis S4 nitrate/sulfonate ABC transporter permease YP_002539620.1 189020 D 311402 CDS YP_002539621.1 222102582 7380377 189868..190605 1 NC_011981.1 ABC transporter ATPase 190605 7380377 Avi_7222 Agrobacterium vitis S4 ABC transporter ATPase YP_002539621.1 189868 D 311402 CDS YP_002539622.1 222102583 7380378 190715..191488 1 NC_011981.1 ABC transporter substrate binding protein (nopaline) 191488 nocT 7380378 nocT Agrobacterium vitis S4 ABC transporter substrate binding protein (nopaline) YP_002539622.1 190715 D 311402 CDS YP_002539623.1 222102584 7380379 191612..192271 1 NC_011981.1 amino acid ABC transporter permease 192271 7380379 Avi_7225 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002539623.1 191612 D 311402 CDS YP_002539624.1 222102585 7380380 192268..193029 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (nopaline) 193029 nocP 7380380 nocP Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (nopaline) YP_002539624.1 192268 D 311402 CDS YP_002539625.1 222102586 7380381 193369..194169 1 NC_011981.1 outer membrane lipoprotein 194169 7380381 Avi_7228 Agrobacterium vitis S4 outer membrane lipoprotein YP_002539625.1 193369 D 311402 CDS YP_002539626.1 222102587 7380382 194247..195314 1 NC_011981.1 ABC transporter ATPase 195314 7380382 Avi_7230 Agrobacterium vitis S4 ABC transporter ATPase YP_002539626.1 194247 D 311402 CDS YP_002539627.1 222102588 7380383 195319..195960 1 NC_011981.1 ABC transporter permease 195960 7380383 Avi_7231 Agrobacterium vitis S4 ABC transporter permease YP_002539627.1 195319 D 311402 CDS YP_002539628.1 222102589 7380384 196120..196920 1 NC_011981.1 outer membrane lipoprotein 196920 7380384 Avi_7233 Agrobacterium vitis S4 outer membrane lipoprotein YP_002539628.1 196120 D 311402 CDS YP_002539629.1 222102590 7380385 196911..198065 1 NC_011981.1 ABC transporter ATPase 198065 7380385 Avi_7234 Agrobacterium vitis S4 ABC transporter ATPase YP_002539629.1 196911 D 311402 CDS YP_002539630.1 222102591 7380386 198046..198699 1 NC_011981.1 ABC transporter permease 198699 7380386 Avi_7235 Agrobacterium vitis S4 ABC transporter permease YP_002539630.1 198046 D 311402 CDS YP_002539631.1 222102592 7380387 199739..200020 1 NC_011981.1 transposase 200020 7380387 Avi_7237 Agrobacterium vitis S4 transposase YP_002539631.1 199739 D 311402 CDS YP_002539632.1 222102593 7380388 200266..200940 1 NC_011981.1 GntR family transcriptional regulator 200940 7380388 Avi_7238 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002539632.1 200266 D 311402 CDS YP_002539633.1 222102594 7380389 201032..201883 1 NC_011981.1 ABC transporter substrate binding protein (nopaline) 201883 nocT 7380389 nocT Agrobacterium vitis S4 ABC transporter substrate binding protein (nopaline) YP_002539633.1 201032 D 311402 CDS YP_002539634.1 222102595 7380390 201900..202670 1 NC_011981.1 nopaline ABC transporter permease 202670 nocQ 7380390 nocQ Agrobacterium vitis S4 nopaline ABC transporter permease YP_002539634.1 201900 D 311402 CDS YP_002539635.1 222102596 7380391 202667..203359 1 NC_011981.1 nopaline ABC transporter permease 203359 nocM 7380391 nocM Agrobacterium vitis S4 nopaline ABC transporter permease YP_002539635.1 202667 D 311402 CDS YP_002539636.1 222102597 7380392 203401..204996 1 NC_011981.1 gamma-glutamyltransferase 204996 ggt 7380392 ggt Agrobacterium vitis S4 gamma-glutamyltransferase YP_002539636.1 203401 D 311402 CDS YP_002539637.1 222102598 7380393 complement(205215..205568) 1 NC_011981.1 phospholipase/Carboxylesterase family protein 205568 7380393 Avi_7245 Agrobacterium vitis S4 phospholipase/Carboxylesterase family protein YP_002539637.1 205215 R 311402 CDS YP_002539638.1 222102599 7380394 complement(205803..206186) 1 NC_011981.1 hypothetical protein 206186 7380394 Avi_7246 Agrobacterium vitis S4 hypothetical protein YP_002539638.1 205803 R 311402 CDS YP_002539639.1 222102600 7380396 complement(207210..208208) 1 NC_011981.1 AraC family transcriptional regulator 208208 7380396 Avi_7250 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002539639.1 207210 R 311402 CDS YP_002539640.1 222102601 7380397 complement(208262..209260) 1 NC_011981.1 hydroxyproline-2-epimerase 209260 7380397 Avi_7251 Agrobacterium vitis S4 hydroxyproline-2-epimerase YP_002539640.1 208262 R 311402 CDS YP_002539641.1 222102602 7380398 complement(209280..210137) 1 NC_011981.1 ABC transporter permease 210137 7380398 Avi_7252 Agrobacterium vitis S4 ABC transporter permease YP_002539641.1 209280 R 311402 CDS YP_002539642.1 222102603 7380399 complement(210134..210982) 1 NC_011981.1 ABC transporter 210982 7380399 Avi_7253 Agrobacterium vitis S4 ABC transporter YP_002539642.1 210134 R 311402 CDS YP_002539643.1 222102604 7380400 complement(210993..212084) 1 NC_011981.1 ABC transporter ATPase 212084 7380400 Avi_7254 Agrobacterium vitis S4 ABC transporter ATPase YP_002539643.1 210993 R 311402 CDS YP_002539644.1 222102605 7380401 complement(212176..213027) 1 NC_011981.1 ABC transporter substrate binding protein (glycine-betaine) 213027 7380401 Avi_7255 Agrobacterium vitis S4 ABC transporter substrate binding protein (glycine-betaine) YP_002539644.1 212176 R 311402 CDS YP_002539645.1 222102606 7380402 complement(213106..214452) 1 NC_011981.1 oxidoreductase 214452 7380402 Avi_7256 Agrobacterium vitis S4 oxidoreductase YP_002539645.1 213106 R 311402 CDS YP_002539646.1 222102607 7380403 complement(214449..215966) 1 NC_011981.1 aldehyde dehydrogenase 215966 dhaL 7380403 dhaL Agrobacterium vitis S4 aldehyde dehydrogenase YP_002539646.1 214449 R 311402 CDS YP_002539647.1 222102608 7380404 complement(215959..216870) 1 NC_011981.1 dihydrodipicolinate synthase 216870 dapA 7380404 dapA Agrobacterium vitis S4 dihydrodipicolinate synthase YP_002539647.1 215959 R 311402 CDS YP_002539648.1 222102609 7380405 complement(216867..217577) 1 NC_011981.1 GntR family transcriptional regulator 217577 7380405 Avi_7259 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002539648.1 216867 R 311402 CDS YP_002539649.1 222102610 7380488 217980..218669 1 NC_011981.1 GntR family transcriptional regulator 218669 7380488 Avi_7262 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002539649.1 217980 D 311402 CDS YP_002539650.1 222102611 7380489 complement(218712..219026) 1 NC_011981.1 transposase 219026 7380489 Avi_7263 Agrobacterium vitis S4 transposase YP_002539650.1 218712 R 311402 CDS YP_002539651.1 222102612 7380490 219073..219225 1 NC_011981.1 truncated Tnp 219225 7380490 Avi_7264 Agrobacterium vitis S4 truncated Tnp YP_002539651.1 219073 D 311402 CDS YP_002539652.1 222102613 7380491 complement(219320..220255) 1 NC_011981.1 Ethanolamine kinase 220255 7380491 Avi_7265 Agrobacterium vitis S4 Ethanolamine kinase YP_002539652.1 219320 R 311402 CDS YP_002539653.1 222102614 7380492 complement(220271..221236) 1 NC_011981.1 aminoglycoside phosphotransferase 221236 7380492 Avi_7266 Agrobacterium vitis S4 aminoglycoside phosphotransferase YP_002539653.1 220271 R 311402 CDS YP_002539654.1 222102615 7380493 complement(221233..222468) 1 NC_011981.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 222468 amaB 7380493 amaB Agrobacterium vitis S4 allantoate amidohydrolase YP_002539654.1 221233 R 311402 CDS YP_002539655.1 222102616 7380494 complement(222521..223282) 1 NC_011981.1 transcriptional regulator DeoR family 223282 7380494 Avi_7268 Agrobacterium vitis S4 transcriptional regulator DeoR family YP_002539655.1 222521 R 311402 CDS YP_002539656.1 222102617 7380495 complement(223338..225182) 1 NC_011981.1 ABC transporter ATPase 225182 moaD 7380495 moaD Agrobacterium vitis S4 ABC transporter ATPase YP_002539656.1 223338 R 311402 CDS YP_002539657.1 222102618 7380496 complement(225182..226102) 1 NC_011981.1 peptide ABC transporter permease 226102 dppC 7380496 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002539657.1 225182 R 311402 CDS YP_002539658.1 222102619 7380497 complement(226099..227079) 1 NC_011981.1 peptide ABC transporter permease 227079 7380497 Avi_7271 Agrobacterium vitis S4 peptide ABC transporter permease YP_002539658.1 226099 R 311402 CDS YP_002539659.1 222102620 7380498 complement(227162..228748) 1 NC_011981.1 peptide ABC transporter substrate-binding protein 228748 7380498 Avi_7272 Agrobacterium vitis S4 peptide ABC transporter substrate-binding protein YP_002539659.1 227162 R 311402 CDS YP_002539660.1 222102621 7380499 229181..230149 1 NC_011981.1 DNA topoisomerase 230149 7380499 Avi_7273 Agrobacterium vitis S4 DNA topoisomerase YP_002539660.1 229181 D 311402 CDS YP_002539661.1 222102622 7380500 230317..233289 1 NC_011981.1 hypothetical protein 233289 7380500 Avi_7274 Agrobacterium vitis S4 hypothetical protein YP_002539661.1 230317 D 311402 CDS YP_002539662.1 222102623 7380501 complement(233401..233913) 1 NC_011981.1 hypothetical protein 233913 7380501 Avi_7275 Agrobacterium vitis S4 hypothetical protein YP_002539662.1 233401 R 311402 CDS YP_002539663.1 222102624 7380502 234111..235064 1 NC_011981.1 hypothetical protein 235064 7380502 Avi_7276 Agrobacterium vitis S4 hypothetical protein YP_002539663.1 234111 D 311402 CDS YP_002539664.1 222102625 7380503 235067..235753 1 NC_011981.1 hypothetical protein 235753 7380503 Avi_7277 Agrobacterium vitis S4 hypothetical protein YP_002539664.1 235067 D 311402 CDS YP_002539665.1 222102626 7380504 complement(235794..236444) 1 NC_011981.1 Transcriptional regulator 236444 7380504 Avi_7278 Agrobacterium vitis S4 Transcriptional regulator YP_002539665.1 235794 R 311402 CDS YP_002539666.1 222102627 7380505 236582..238144 1 NC_011981.1 hypothetical protein 238144 7380505 Avi_7279 Agrobacterium vitis S4 hypothetical protein YP_002539666.1 236582 D 311402 CDS YP_002539667.1 222102628 7380506 238155..238655 1 NC_011981.1 Electron transport protein SCO1/SenC 238655 7380506 Avi_7280 Agrobacterium vitis S4 Electron transport protein SCO1/SenC YP_002539667.1 238155 D 311402 CDS YP_002539668.1 222102629 7380507 239090..239491 1 NC_011981.1 hypothetical protein 239491 7380507 Avi_7281 Agrobacterium vitis S4 hypothetical protein YP_002539668.1 239090 D 311402 CDS YP_002539669.1 222102630 7380508 239488..240621 1 NC_011981.1 HlyD family secretion protein 240621 7380508 Avi_7282 Agrobacterium vitis S4 HlyD family secretion protein YP_002539669.1 239488 D 311402 CDS YP_002539670.1 222102631 7380509 240618..243674 1 NC_011981.1 Acr family transporter 243674 7380509 Avi_7283 Agrobacterium vitis S4 Acr family transporter YP_002539670.1 240618 D 311402 CDS YP_002539671.1 222102632 7380510 complement(243791..244750) 1 NC_011981.1 two component sensor kinase 244750 fecR 7380510 fecR Agrobacterium vitis S4 two component sensor kinase YP_002539671.1 243791 R 311402 CDS YP_002539672.1 222102633 7380511 complement(245080..245622) 1 NC_011981.1 sigma factor 245622 7380511 Avi_7286 Agrobacterium vitis S4 sigma factor YP_002539672.1 245080 R 311402 CDS YP_002539673.1 222102634 7380512 complement(245916..246710) 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (iron (III) dicitrate) 246710 fecE 7380512 fecE Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (iron (III) dicitrate) YP_002539673.1 245916 R 311402 CDS YP_002539674.1 222102635 7380513 complement(246700..247683) 1 NC_011981.1 ABC transporter 247683 fecD 7380513 fecD Agrobacterium vitis S4 ABC transporter YP_002539674.1 246700 R 311402 CDS YP_002539675.1 222102636 7380514 complement(247680..248708) 1 NC_011981.1 Fe3+ dicitrate ABC transporter permease 248708 fecC 7380514 fecC Agrobacterium vitis S4 Fe3+ dicitrate ABC transporter permease YP_002539675.1 247680 R 311402 CDS YP_002539676.1 222102637 7380515 complement(248705..249640) 1 NC_011981.1 Fe3+ dicitrate ABC transporter permease 249640 fecB 7380515 fecB Agrobacterium vitis S4 Fe3+ dicitrate ABC transporter permease YP_002539676.1 248705 R 311402 CDS YP_002539677.1 222102638 7380516 complement(249699..252206) 1 NC_011981.1 TonB-dependent receptor 252206 7380516 Avi_7293 Agrobacterium vitis S4 TonB-dependent receptor YP_002539677.1 249699 R 311402 CDS YP_002539678.1 222102639 7380517 complement(252303..253181) 1 NC_011981.1 hypothetical protein 253181 7380517 Avi_7294 Agrobacterium vitis S4 hypothetical protein YP_002539678.1 252303 R 311402 CDS YP_002539679.1 222102640 7380518 complement(253238..254032) 1 NC_011981.1 thioesterase 254032 grsT 7380518 grsT Agrobacterium vitis S4 thioesterase YP_002539679.1 253238 R 311402 CDS YP_002539680.1 222102641 7380519 complement(254029..255603) 1 NC_011981.1 microcystin synthetase B 255603 mcyB 7380519 mcyB Agrobacterium vitis S4 microcystin synthetase B YP_002539680.1 254029 R 311402 CDS YP_002539681.1 222102642 7380520 complement(255728..263449) 1 NC_011981.1 peptide synthetase 263449 7380520 Avi_7298 Agrobacterium vitis S4 peptide synthetase YP_002539681.1 255728 R 311402 CDS YP_002539682.1 222102643 7380521 complement(263446..267846) 1 NC_011981.1 polyketide synthetase 267846 7380521 Avi_7299 Agrobacterium vitis S4 polyketide synthetase YP_002539682.1 263446 R 311402 CDS YP_002539683.1 222102644 7380522 complement(267880..268440) 1 NC_011981.1 hypothetical protein 268440 7380522 Avi_7300 Agrobacterium vitis S4 hypothetical protein YP_002539683.1 267880 R 311402 CDS YP_002539684.1 222102645 7380523 complement(268437..269015) 1 NC_011981.1 hypothetical protein 269015 7380523 Avi_7301 Agrobacterium vitis S4 hypothetical protein YP_002539684.1 268437 R 311402 CDS YP_002539685.1 222102646 7380524 complement(269252..270652) 1 NC_011981.1 polyketide synthase and peptide synthetase 270652 mcyE 7380524 mcyE Agrobacterium vitis S4 polyketide synthase and peptide synthetase YP_002539685.1 269252 R 311402 CDS YP_002539686.1 222102647 7380525 complement(270649..271539) 1 NC_011981.1 hypothetical protein 271539 7380525 Avi_7304 Agrobacterium vitis S4 hypothetical protein YP_002539686.1 270649 R 311402 CDS YP_002539687.1 222102648 7380526 complement(271520..276040) 1 NC_011981.1 peptide synthetase 276040 7380526 Avi_7306 Agrobacterium vitis S4 peptide synthetase YP_002539687.1 271520 R 311402 CDS YP_002539688.1 222102649 7380527 276366..278633 1 NC_011981.1 polyketide synthetase 278633 7380527 Avi_7308 Agrobacterium vitis S4 polyketide synthetase YP_002539688.1 276366 D 311402 CDS YP_002539689.1 222102650 7380528 278797..283257 1 NC_011981.1 polyketide synthase 283257 7380528 Avi_7309 Agrobacterium vitis S4 polyketide synthase YP_002539689.1 278797 D 311402 CDS YP_002539690.1 222102651 7380529 283302..284369 1 NC_011981.1 monooxygenase 284369 7380529 Avi_7310 Agrobacterium vitis S4 monooxygenase YP_002539690.1 283302 D 311402 CDS YP_002539691.1 222102652 7380530 284375..290926 1 NC_011981.1 peptide synthetase 290926 7380530 Avi_7311 Agrobacterium vitis S4 peptide synthetase YP_002539691.1 284375 D 311402 CDS YP_002539692.1 222102653 7380531 290930..292306 1 NC_011981.1 hypothetical protein 292306 7380531 Avi_7312 Agrobacterium vitis S4 hypothetical protein YP_002539692.1 290930 D 311402 CDS YP_002539693.1 222102654 7380532 292394..292912 1 NC_011981.1 hypothetical protein 292912 7380532 Avi_7313 Agrobacterium vitis S4 hypothetical protein YP_002539693.1 292394 D 311402 CDS YP_002539694.1 222102655 7380533 complement(293638..294453) 1 NC_011981.1 hypothetical protein 294453 7380533 Avi_7315 Agrobacterium vitis S4 hypothetical protein YP_002539694.1 293638 R 311402 CDS YP_002539695.1 222102656 7380534 complement(294618..294815) 1 NC_011981.1 transposase 294815 7380534 Avi_7317 Agrobacterium vitis S4 transposase YP_002539695.1 294618 R 311402 CDS YP_002539696.1 222102657 7380536 295759..298083 1 NC_011981.1 methyl-accepting chemotaxis protein 298083 7380536 Avi_7320 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002539696.1 295759 D 311402 CDS YP_002539697.1 222102658 7380537 complement(298934..299899) 1 NC_011981.1 asparaginase 299899 asg 7380537 asg Agrobacterium vitis S4 asparaginase YP_002539697.1 298934 R 311402 CDS YP_002539698.1 222102659 7380538 complement(299936..300754) 1 NC_011981.1 hypothetical protein 300754 7380538 Avi_7323 Agrobacterium vitis S4 hypothetical protein YP_002539698.1 299936 R 311402 CDS YP_002539699.1 222102660 7380539 complement(300840..301742) 1 NC_011981.1 peptide ABC transporter permease 301742 dppC 7380539 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002539699.1 300840 R 311402 CDS YP_002539700.1 222102661 7380540 complement(301750..302670) 1 NC_011981.1 peptide ABC transporter permease 302670 dppB 7380540 dppB Agrobacterium vitis S4 peptide ABC transporter permease YP_002539700.1 301750 R 311402 CDS YP_002539701.1 222102662 7380541 complement(302806..304359) 1 NC_011981.1 ABC transporter substrate binding protein (dipeptide) 304359 dppA 7380541 dppA Agrobacterium vitis S4 ABC transporter substrate binding protein (dipeptide) YP_002539701.1 302806 R 311402 CDS YP_002539702.1 222102663 7380542 complement(304403..306283) 1 NC_011981.1 ABC transporter ATPase 306283 7380542 Avi_7329 Agrobacterium vitis S4 ABC transporter ATPase YP_002539702.1 304403 R 311402 CDS YP_002539703.1 222102664 7380543 complement(306321..307262) 1 NC_011981.1 transcriptional regulator 307262 7380543 Avi_7330 Agrobacterium vitis S4 transcriptional regulator YP_002539703.1 306321 R 311402 CDS YP_002539704.1 222102665 7380544 307726..308790 1 NC_011981.1 Transcriptional regulator/sugar kinase 308790 7380544 Avi_7332 Agrobacterium vitis S4 Transcriptional regulator/sugar kinase YP_002539704.1 307726 D 311402 CDS YP_002539705.1 222102666 7380545 complement(308759..309997) 1 NC_011981.1 transcriptional regulator ROK family 309997 xylR 7380545 xylR Agrobacterium vitis S4 transcriptional regulator ROK family YP_002539705.1 308759 R 311402 CDS YP_002539706.1 222102667 7380546 complement(310077..313100) 1 NC_011981.1 alpha-D-mannosidase 313100 7380546 Avi_7334 Agrobacterium vitis S4 alpha-D-mannosidase YP_002539706.1 310077 R 311402 CDS YP_002539707.1 222102668 7380547 complement(313134..313976) 1 NC_011981.1 sugar ABC transporter permease 313976 7380547 Avi_7335 Agrobacterium vitis S4 sugar ABC transporter permease YP_002539707.1 313134 R 311402 CDS YP_002539708.1 222102669 7380548 complement(313973..314815) 1 NC_011981.1 ABC transporter permease 314815 7380548 Avi_7336 Agrobacterium vitis S4 ABC transporter permease YP_002539708.1 313973 R 311402 CDS YP_002539709.1 222102670 7380549 complement(314967..316262) 1 NC_011981.1 ABC transporter substrate-binding protein 316262 7380549 Avi_7337 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002539709.1 314967 R 311402 CDS YP_002539710.1 222102671 7380550 316447..317445 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (sugar) 317445 7380550 Avi_7338 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (sugar) YP_002539710.1 316447 D 311402 CDS YP_002539711.1 222102672 7380551 complement(317614..319251) 1 NC_011981.1 transacetylase 319251 attR 7380551 attR Agrobacterium vitis S4 transacetylase YP_002539711.1 317614 R 311402 CDS YP_002539712.1 222102673 7380552 complement(319257..321104) 1 NC_011981.1 hypothetical protein 321104 7380552 Avi_7340 Agrobacterium vitis S4 hypothetical protein YP_002539712.1 319257 R 311402 CDS YP_002539713.1 222102674 7380553 complement(321179..322459) 1 NC_011981.1 sugar ABC transporter substrate-binding protein 322459 7380553 Avi_7341 Agrobacterium vitis S4 sugar ABC transporter substrate-binding protein YP_002539713.1 321179 R 311402 CDS YP_002539714.1 222102675 7380554 complement(322509..323219) 1 NC_011981.1 hypothetical protein 323219 7380554 Avi_7342 Agrobacterium vitis S4 hypothetical protein YP_002539714.1 322509 R 311402 CDS YP_002539715.1 222102676 7380555 complement(323232..324341) 1 NC_011981.1 ABC transporter ATPase 324341 7380555 Avi_7343 Agrobacterium vitis S4 ABC transporter ATPase YP_002539715.1 323232 R 311402 CDS YP_002539716.1 222102677 7380556 complement(324356..325528) 1 NC_011981.1 Unsaturated glucuronyl hydrolase 325528 7380556 Avi_7344 Agrobacterium vitis S4 Unsaturated glucuronyl hydrolase YP_002539716.1 324356 R 311402 CDS YP_002539717.1 222102678 7380557 complement(325533..326369) 1 NC_011981.1 sugar ABC transporter permease 326369 7380557 Avi_7346 Agrobacterium vitis S4 sugar ABC transporter permease YP_002539717.1 325533 R 311402 CDS YP_002539718.1 222102679 7380558 complement(326373..327335) 1 NC_011981.1 sugar ABC transporter permease 327335 7380558 Avi_7347 Agrobacterium vitis S4 sugar ABC transporter permease YP_002539718.1 326373 R 311402 CDS YP_002539719.1 222102680 7380559 327547..329352 1 NC_011981.1 hypothetical protein 329352 7380559 Avi_7349 Agrobacterium vitis S4 hypothetical protein YP_002539719.1 327547 D 311402 CDS YP_002539720.1 222102681 7380560 329364..330149 1 NC_011981.1 hypothetical protein 330149 7380560 Avi_7350 Agrobacterium vitis S4 hypothetical protein YP_002539720.1 329364 D 311402 CDS YP_002539721.1 222102682 7380561 complement(330153..331007) 1 NC_011981.1 GntR family transcriptional regulator 331007 7380561 Avi_7351 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002539721.1 330153 R 311402 CDS YP_002539722.1 222102683 7380562 complement(331026..331283) 1 NC_011981.1 hypothetical protein 331283 ych 7380562 ych Agrobacterium vitis S4 hypothetical protein YP_002539722.1 331026 R 311402 CDS YP_002539723.1 222102684 7380563 complement(331392..331832) 1 NC_011981.1 hypothetical protein 331832 7380563 Avi_7353 Agrobacterium vitis S4 hypothetical protein YP_002539723.1 331392 R 311402 CDS YP_002539724.1 222102685 7380564 332202..333254 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (sugars) 333254 7380564 Avi_7355 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (sugars) YP_002539724.1 332202 D 311402 CDS YP_002539725.1 222102686 7380565 333642..335015 1 NC_011981.1 ABC transporter, binding protein 335015 7380565 Avi_7356 Agrobacterium vitis S4 ABC transporter, binding protein YP_002539725.1 333642 D 311402 CDS YP_002539726.1 222102687 7380566 335160..336269 1 NC_011981.1 sugar ABC transporter permease 336269 7380566 Avi_7357 Agrobacterium vitis S4 sugar ABC transporter permease YP_002539726.1 335160 D 311402 CDS YP_002539727.1 222102688 7380567 336280..337200 1 NC_011981.1 ABC transporter permease 337200 7380567 Avi_7358 Agrobacterium vitis S4 ABC transporter permease YP_002539727.1 336280 D 311402 CDS YP_002539728.1 222102689 7380568 337242..337697 1 NC_011981.1 hypothetical protein 337697 7380568 Avi_7360 Agrobacterium vitis S4 hypothetical protein YP_002539728.1 337242 D 311402 CDS YP_002539729.1 222102690 7380569 337708..338634 1 NC_011981.1 ribokinase 338634 rbsK 7380569 rbsK Agrobacterium vitis S4 ribokinase YP_002539729.1 337708 D 311402 CDS YP_002539730.1 222102691 7380570 338738..339718 1 NC_011981.1 xylose isomerase 339718 7380570 Avi_7362 Agrobacterium vitis S4 xylose isomerase YP_002539730.1 338738 D 311402 CDS YP_002539731.1 222102692 7380406 339924..340874 1 NC_011981.1 ABC transporter substrate-binding protein 340874 7380406 Avi_7364 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002539731.1 339924 D 311402 CDS YP_002539732.1 222102693 7380407 340939..342459 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (ribose) 342459 rbsA 7380407 rbsA Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (ribose) YP_002539732.1 340939 D 311402 CDS YP_002539733.1 222102694 7380408 342479..343456 1 NC_011981.1 ribose ABC transporter permease 343456 rbsC 7380408 rbsC Agrobacterium vitis S4 ribose ABC transporter permease YP_002539733.1 342479 D 311402 CDS YP_002539734.1 222102695 7380409 343453..344328 1 NC_011981.1 involved in rpiB and als operon repression; DNA-binding transcriptional repressor RpiR 344328 7380409 Avi_7367 Agrobacterium vitis S4 DNA-binding transcriptional repressor RpiR YP_002539734.1 343453 D 311402 CDS YP_002539735.1 222102696 7380410 344325..345224 1 NC_011981.1 ribokinase 345224 7380410 Avi_7369 Agrobacterium vitis S4 ribokinase YP_002539735.1 344325 D 311402 CDS YP_002539736.1 222102697 7380411 complement(345322..346077) 1 NC_011981.1 transcriptional regulator 346077 7380411 Avi_7370 Agrobacterium vitis S4 transcriptional regulator YP_002539736.1 345322 R 311402 CDS YP_002539737.1 222102698 7380412 346190..347104 1 NC_011981.1 zinc-binding oxidoreductase 347104 7380412 Avi_7371 Agrobacterium vitis S4 zinc-binding oxidoreductase YP_002539737.1 346190 D 311402 CDS YP_002539738.1 222102699 7380413 347511..348617 1 NC_011981.1 hypothetical protein 348617 7380413 Avi_7373 Agrobacterium vitis S4 hypothetical protein YP_002539738.1 347511 D 311402 CDS YP_002539739.1 222102700 7380414 complement(348707..350341) 1 NC_011981.1 ribitol kinase 350341 7380414 Avi_7374 Agrobacterium vitis S4 ribitol kinase YP_002539739.1 348707 R 311402 CDS YP_002539740.1 222102701 7380415 complement(350398..351126) 1 NC_011981.1 ribitol 2-dehydrogenase 351126 rdh 7380415 rdh Agrobacterium vitis S4 ribitol 2-dehydrogenase YP_002539740.1 350398 R 311402 CDS YP_002539741.1 222102702 7380416 complement(351152..352411) 1 NC_011981.1 xylose ABC transporter permease 352411 xylH 7380416 xylH Agrobacterium vitis S4 xylose ABC transporter permease YP_002539741.1 351152 R 311402 CDS YP_002539742.1 222102703 7380417 complement(352408..353241) 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (xylose) 353241 xylG 7380417 xylG Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (xylose) YP_002539742.1 352408 R 311402 CDS YP_002539743.1 222102704 7380418 complement(353313..354359) 1 NC_011981.1 ABC transporter substrate binding protein (xylose) 354359 xylF 7380418 xylF Agrobacterium vitis S4 ABC transporter substrate binding protein (xylose) YP_002539743.1 353313 R 311402 CDS YP_002539744.1 222102705 7380419 354596..355639 1 NC_011981.1 transcriptional regulator LacI family 355639 7380419 Avi_7379 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002539744.1 354596 D 311402 CDS YP_002539745.1 222102706 7380420 356152..356562 1 NC_011981.1 hypothetical protein 356562 7380420 Avi_7380 Agrobacterium vitis S4 hypothetical protein YP_002539745.1 356152 D 311402 CDS YP_002539746.1 222102707 7380421 complement(356732..357940) 1 NC_011981.1 permease 357940 7380421 Avi_7381 Agrobacterium vitis S4 permease YP_002539746.1 356732 R 311402 CDS YP_002539747.1 222102708 7380422 complement(358001..358990) 1 NC_011981.1 AraC family transcriptional regulator 358990 7380422 Avi_7382 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002539747.1 358001 R 311402 CDS YP_002539748.1 222102709 7380423 359928..360227 1 NC_011981.1 glutaredoxin protein 360227 nrdH 7380423 nrdH Agrobacterium vitis S4 glutaredoxin protein YP_002539748.1 359928 D 311402 CDS YP_002539749.1 222102710 7380424 360238..360654 1 NC_011981.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 360654 nrdI 7380424 nrdI Agrobacterium vitis S4 ribonucleotide reductase stimulatory protein YP_002539749.1 360238 D 311402 CDS YP_002539750.1 222102711 7380425 360696..362777 1 NC_011981.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 362777 7380425 Avi_7387 Agrobacterium vitis S4 ribonucleotide-diphosphate reductase subunit alpha YP_002539750.1 360696 D 311402 CDS YP_002539751.1 222102712 7380426 362792..363781 1 NC_011981.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 363781 nrdF 7380426 nrdF Agrobacterium vitis S4 ribonucleotide-diphosphate reductase subunit beta YP_002539751.1 362792 D 311402 CDS YP_002539752.1 222102713 7380427 complement(364029..364340) 1 NC_011981.1 transcriptional regulator 364340 7380427 Avi_7389 Agrobacterium vitis S4 transcriptional regulator YP_002539752.1 364029 R 311402 CDS YP_002539753.1 222102714 7380428 364439..365530 1 NC_011981.1 xenobiotic reductase A 365530 7380428 Avi_7390 Agrobacterium vitis S4 xenobiotic reductase A YP_002539753.1 364439 D 311402 CDS YP_002539754.1 222102715 7380429 366219..367574 1 NC_011981.1 glutamyl-tRNA amidotransferase subunit A 367574 gatA 7380429 gatA Agrobacterium vitis S4 glutamyl-tRNA amidotransferase subunit A YP_002539754.1 366219 D 311402 CDS YP_002539755.1 222102716 7380430 367608..368393 1 NC_011981.1 amino acid ABC transporter substrate-binding protein 368393 7380430 Avi_7393 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002539755.1 367608 D 311402 CDS YP_002539756.1 222102717 7380431 368464..369186 1 NC_011981.1 ABC transporter permease 369186 7380431 Avi_7394 Agrobacterium vitis S4 ABC transporter permease YP_002539756.1 368464 D 311402 CDS YP_002539757.1 222102718 7380432 369188..369874 1 NC_011981.1 ABC transporter permease 369874 7380432 Avi_7395 Agrobacterium vitis S4 ABC transporter permease YP_002539757.1 369188 D 311402 CDS YP_002539758.1 222102719 7380433 369971..370864 1 NC_011981.1 Transcriptional regulator 370864 7380433 Avi_7396 Agrobacterium vitis S4 Transcriptional regulator YP_002539758.1 369971 D 311402 CDS YP_002539759.1 222102720 7380434 complement(371039..372187) 1 NC_011981.1 Selenocysteine lyase 372187 7380434 Avi_7397 Agrobacterium vitis S4 Selenocysteine lyase YP_002539759.1 371039 R 311402 CDS YP_002539760.1 222102721 7380435 complement(372196..373212) 1 NC_011981.1 ornithine cyclodeaminase 373212 7380435 Avi_7398 Agrobacterium vitis S4 ornithine cyclodeaminase YP_002539760.1 372196 R 311402 CDS YP_002539761.1 222102722 7380436 373498..374628 1 NC_011981.1 oxidoreductase 374628 7380436 Avi_7399 Agrobacterium vitis S4 oxidoreductase YP_002539761.1 373498 D 311402 CDS YP_002539762.1 222102723 7380437 374625..374975 1 NC_011981.1 hypothetical protein 374975 7380437 Avi_7400 Agrobacterium vitis S4 hypothetical protein YP_002539762.1 374625 D 311402 CDS YP_002539763.1 222102724 7380438 375396..376295 1 NC_011981.1 Transcriptional regulator 376295 7380438 Avi_7402 Agrobacterium vitis S4 Transcriptional regulator YP_002539763.1 375396 D 311402 CDS YP_002539764.1 222102725 7380439 376370..377011 1 NC_011981.1 hypothetical protein 377011 7380439 Avi_7403 Agrobacterium vitis S4 hypothetical protein YP_002539764.1 376370 D 311402 CDS YP_002539765.1 222102726 7380440 377643..378932 1 NC_011981.1 Acyl-CoA dehydrogenase 378932 7380440 Avi_7405 Agrobacterium vitis S4 Acyl-CoA dehydrogenase YP_002539765.1 377643 D 311402 CDS YP_002539766.1 222102727 7380441 378983..379618 1 NC_011981.1 4-hydroxyphenylacetate 3-monooxygenase reductase component 379618 7380441 Avi_7406 Agrobacterium vitis S4 4-hydroxyphenylacetate 3-monooxygenase reductase component YP_002539766.1 378983 D 311402 CDS YP_002539767.1 222102728 7380442 379820..382147 1 NC_011981.1 ferrienterobactin-like protein 382147 7380442 Avi_7407 Agrobacterium vitis S4 ferrienterobactin-like protein YP_002539767.1 379820 D 311402 CDS YP_002539768.1 222102729 7380443 complement(382376..383233) 1 NC_011981.1 Transcriptional regulator 383233 7380443 Avi_7409 Agrobacterium vitis S4 Transcriptional regulator YP_002539768.1 382376 R 311402 CDS YP_002539769.1 222102730 7380444 383454..384209 1 NC_011981.1 arylmalonate decarboxylase 384209 7380444 Avi_7410 Agrobacterium vitis S4 arylmalonate decarboxylase YP_002539769.1 383454 D 311402 CDS YP_002539770.1 222102731 7380445 384226..385377 1 NC_011981.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 385377 7380445 Avi_7411 Agrobacterium vitis S4 acetyl-CoA acetyltransferase YP_002539770.1 384226 D 311402 CDS YP_002539771.1 222102732 7380446 385841..387226 1 NC_011981.1 ScoB 387226 7380446 Avi_7413 Agrobacterium vitis S4 ScoB YP_002539771.1 385841 D 311402 CDS YP_002539772.1 222102733 7380447 387340..387768 1 NC_011981.1 hypothetical protein 387768 7380447 Avi_7414 Agrobacterium vitis S4 hypothetical protein YP_002539772.1 387340 D 311402 CDS YP_002539773.1 222102734 7380448 complement(388188..389435) 1 NC_011981.1 Permeases of the major facilitator superfamily 389435 7380448 Avi_7416 Agrobacterium vitis S4 Permeases of the major facilitator superfamily YP_002539773.1 388188 R 311402 CDS YP_002539774.1 222102735 7380449 389768..390919 1 NC_011981.1 oxidoreductase 390919 7380449 Avi_7417 Agrobacterium vitis S4 oxidoreductase YP_002539774.1 389768 D 311402 CDS YP_002539775.1 222102736 7380450 391027..391692 1 NC_011981.1 gamma-carboxymuconolactone decarboxylase subunit 391692 7380450 Avi_7418 Agrobacterium vitis S4 gamma-carboxymuconolactone decarboxylase subunit YP_002539775.1 391027 D 311402 CDS YP_002539776.1 222102737 7380451 391694..392398 1 NC_011981.1 hypothetical protein 392398 7380451 Avi_7419 Agrobacterium vitis S4 hypothetical protein YP_002539776.1 391694 D 311402 CDS YP_002539777.1 222102738 7380452 392484..393329 1 NC_011981.1 oxidoreductase 393329 7380452 Avi_7421 Agrobacterium vitis S4 oxidoreductase YP_002539777.1 392484 D 311402 CDS YP_002539778.1 222102739 7380453 393334..393894 1 NC_011981.1 hypothetical protein 393894 7380453 Avi_7422 Agrobacterium vitis S4 hypothetical protein YP_002539778.1 393334 D 311402 CDS YP_002539779.1 222102740 7380454 393954..394808 1 NC_011981.1 fumarylacetoacetate (FAA) hydrolase family protein 394808 hpcE 7380454 hpcE Agrobacterium vitis S4 fumarylacetoacetate (FAA) hydrolase family protein YP_002539779.1 393954 D 311402 CDS YP_002539780.1 222102741 7380455 complement(395057..396568) 1 NC_011981.1 catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase 396568 mhpA 7380455 mhpA Agrobacterium vitis S4 3-(3-hydroxyphenyl)propionate hydroxylase YP_002539780.1 395057 R 311402 CDS YP_002539781.1 222102742 7380456 complement(396552..398033) 1 NC_011981.1 2-methylcitrate dehydratase family protein 398033 7380456 Avi_7426 Agrobacterium vitis S4 2-methylcitrate dehydratase family protein YP_002539781.1 396552 R 311402 CDS YP_002539782.1 222102743 7380457 398288..398731 1 NC_011981.1 hypothetical protein 398731 7380457 Avi_7427 Agrobacterium vitis S4 hypothetical protein YP_002539782.1 398288 D 311402 CDS YP_002539783.1 222102744 7380458 398827..399360 1 NC_011981.1 ring-cleavage extradiol dioxygenase 399360 7380458 Avi_7428 Agrobacterium vitis S4 ring-cleavage extradiol dioxygenase YP_002539783.1 398827 D 311402 CDS YP_002539784.1 222102745 7380459 399505..400440 1 NC_011981.1 fumarylacetoacetate (FAA) hydrolase family protein 400440 7380459 Avi_7430 Agrobacterium vitis S4 fumarylacetoacetate (FAA) hydrolase family protein YP_002539784.1 399505 D 311402 CDS YP_002539785.1 222102746 7380460 400596..401369 1 NC_011981.1 Transcriptional regulator 401369 7380460 Avi_7431 Agrobacterium vitis S4 Transcriptional regulator YP_002539785.1 400596 D 311402 CDS YP_002539786.1 222102747 7380461 401388..401936 1 NC_011981.1 hypothetical protein 401936 7380461 Avi_7432 Agrobacterium vitis S4 hypothetical protein YP_002539786.1 401388 D 311402 CDS YP_002539787.1 222102748 7380462 complement(401961..403052) 1 NC_011981.1 branched-chain amino acid ABC transporter permease 403052 7380462 Avi_7433 Agrobacterium vitis S4 branched-chain amino acid ABC transporter permease YP_002539787.1 401961 R 311402 CDS YP_002539788.1 222102749 7380463 complement(403063..403926) 1 NC_011981.1 branched-chain amino acid ABC transporter permease 403926 7380463 Avi_7434 Agrobacterium vitis S4 branched-chain amino acid ABC transporter permease YP_002539788.1 403063 R 311402 CDS YP_002539789.1 222102750 7380464 complement(403913..404638) 1 NC_011981.1 ABC transporter 404638 7380464 Avi_7436 Agrobacterium vitis S4 ABC transporter YP_002539789.1 403913 R 311402 CDS YP_002539790.1 222102751 7380465 complement(404635..405354) 1 NC_011981.1 ABC transporter ATPase 405354 7380465 Avi_7437 Agrobacterium vitis S4 ABC transporter ATPase YP_002539790.1 404635 R 311402 CDS YP_002539791.1 222102752 7380466 complement(405413..406807) 1 NC_011981.1 ABC transporter substrate-binding protein 406807 7380466 Avi_7438 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002539791.1 405413 R 311402 CDS YP_002539792.1 222102753 7380467 complement(407029..408786) 1 NC_011981.1 2,4-dichlorophenol hydroxylase 408786 7380467 Avi_7439 Agrobacterium vitis S4 2,4-dichlorophenol hydroxylase YP_002539792.1 407029 R 311402 CDS YP_002539793.1 222102754 7380468 complement(408815..409888) 1 NC_011981.1 maleylacetate reductase 409888 macA 7380468 macA Agrobacterium vitis S4 maleylacetate reductase YP_002539793.1 408815 R 311402 CDS YP_002539794.1 222102755 7380469 409990..410940 1 NC_011981.1 LysR family transcriptional regulator 410940 7380469 Avi_7441 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002539794.1 409990 D 311402 CDS YP_002539795.1 222102756 7380470 complement(410951..411283) 1 NC_011981.1 hypothetical protein 411283 7380470 Avi_7442 Agrobacterium vitis S4 hypothetical protein YP_002539795.1 410951 R 311402 CDS YP_002539796.1 222102757 7380471 complement(411297..412133) 1 NC_011981.1 dioxygenase 412133 7380471 Avi_7443 Agrobacterium vitis S4 dioxygenase YP_002539796.1 411297 R 311402 CDS YP_002539797.1 222102758 7380472 complement(413058..416144) 1 NC_011981.1 alpha-D-mannosidase 416144 7380472 Avi_7446 Agrobacterium vitis S4 alpha-D-mannosidase YP_002539797.1 413058 R 311402 CDS YP_002539798.1 222102759 7380473 416575..417717 1 NC_011981.1 extracellular solute-binding protein 417717 7380473 Avi_7450 Agrobacterium vitis S4 extracellular solute-binding protein YP_002539798.1 416575 D 311402 CDS YP_002539799.1 222102760 7380474 417721..418590 1 NC_011981.1 ABC transporter permease 418590 potB 7380474 potB Agrobacterium vitis S4 ABC transporter permease YP_002539799.1 417721 D 311402 CDS YP_002539800.1 222102761 7380475 418593..419408 1 NC_011981.1 ABC transporter permease 419408 7380475 Avi_7452 Agrobacterium vitis S4 ABC transporter permease YP_002539800.1 418593 D 311402 CDS YP_002539801.1 222102762 7380476 419448..420491 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (iron) 420491 afuC 7380476 afuC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (iron) YP_002539801.1 419448 D 311402 CDS YP_002539802.1 222102763 7380477 complement(420492..421757) 1 NC_011981.1 transcriptional regulator ROK family 421757 7380477 Avi_7454 Agrobacterium vitis S4 transcriptional regulator ROK family YP_002539802.1 420492 R 311402 CDS YP_002539803.1 222102764 7380478 complement(421804..422682) 1 NC_011981.1 hypothetical protein 422682 7380478 Avi_7455 Agrobacterium vitis S4 hypothetical protein YP_002539803.1 421804 R 311402 CDS YP_002539804.1 222102765 7380479 422937..424013 1 NC_011981.1 hypothetical protein 424013 7380479 Avi_7457 Agrobacterium vitis S4 hypothetical protein YP_002539804.1 422937 D 311402 CDS YP_002539805.1 222102766 7380480 complement(424178..424789) 1 NC_011981.1 hypothetical protein 424789 7380480 Avi_7458 Agrobacterium vitis S4 hypothetical protein YP_002539805.1 424178 R 311402 CDS YP_002539806.1 222102767 7380481 complement(424795..425244) 1 NC_011981.1 transcriptional regulator 425244 7380481 Avi_7459 Agrobacterium vitis S4 transcriptional regulator YP_002539806.1 424795 R 311402 CDS YP_002539807.1 222102768 7380482 complement(425400..425609) 1 NC_011981.1 hypothetical protein 425609 7380482 Avi_7461 Agrobacterium vitis S4 hypothetical protein YP_002539807.1 425400 R 311402 CDS YP_002539808.1 222102769 7380484 complement(427750..429228) 1 NC_011981.1 hypothetical protein 429228 7380484 Avi_7466 Agrobacterium vitis S4 hypothetical protein YP_002539808.1 427750 R 311402 CDS YP_002539809.1 222102770 7380485 complement(429225..430457) 1 NC_011981.1 hypothetical protein 430457 7380485 Avi_7467 Agrobacterium vitis S4 hypothetical protein YP_002539809.1 429225 R 311402 CDS YP_002539810.1 222102771 7380487 430710..431300 1 NC_011981.1 transposase 431300 7380487 Avi_7470 Agrobacterium vitis S4 transposase YP_002539810.1 430710 D 311402 CDS YP_002539811.1 222102772 7380030 431762..432781 1 NC_011981.1 transcriptional regulator LacI family 432781 7380030 Avi_7472 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002539811.1 431762 D 311402 CDS YP_002539812.1 222102773 7380031 432816..433775 1 NC_011981.1 ABC transporter ATPase 433775 7380031 Avi_7473 Agrobacterium vitis S4 ABC transporter ATPase YP_002539812.1 432816 D 311402 CDS YP_002539813.1 222102774 7380032 433772..434587 1 NC_011981.1 ABC transporter ATPase 434587 7380032 Avi_7475 Agrobacterium vitis S4 ABC transporter ATPase YP_002539813.1 433772 D 311402 CDS YP_002539814.1 222102775 7380033 434584..435588 1 NC_011981.1 sugar ABC transporter permease 435588 7380033 Avi_7476 Agrobacterium vitis S4 sugar ABC transporter permease YP_002539814.1 434584 D 311402 CDS YP_002539815.1 222102776 7380034 435592..436659 1 NC_011981.1 resiniferatoxin-binding phosphotriesterase-related protein 436659 7380034 Avi_7477 Agrobacterium vitis S4 resiniferatoxin-binding phosphotriesterase-related protein YP_002539815.1 435592 D 311402 CDS YP_002539816.1 222102777 7380035 436690..437460 1 NC_011981.1 hypothetical protein 437460 7380035 Avi_7478 Agrobacterium vitis S4 hypothetical protein YP_002539816.1 436690 D 311402 CDS YP_002539817.1 222102778 7380036 complement(437466..438362) 1 NC_011981.1 ribokinase 438362 rbsK 7380036 rbsK Agrobacterium vitis S4 ribokinase YP_002539817.1 437466 R 311402 CDS YP_002539818.1 222102779 7380037 438409..439251 1 NC_011981.1 hypothetical protein 439251 7380037 Avi_7481 Agrobacterium vitis S4 hypothetical protein YP_002539818.1 438409 D 311402 CDS YP_002539819.1 222102780 7380038 439257..440552 1 NC_011981.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 440552 amaB 7380038 amaB Agrobacterium vitis S4 allantoate amidohydrolase YP_002539819.1 439257 D 311402 CDS YP_002539820.1 222102781 7380039 complement(440590..443673) 1 NC_011981.1 Acr family transporter 443673 7380039 Avi_7483 Agrobacterium vitis S4 Acr family transporter YP_002539820.1 440590 R 311402 CDS YP_002539821.1 222102782 7380040 complement(443670..444725) 1 NC_011981.1 HlyD family secretion protein 444725 7380040 Avi_7484 Agrobacterium vitis S4 HlyD family secretion protein YP_002539821.1 443670 R 311402 CDS YP_002539822.1 222102783 7380041 complement(444788..446260) 1 NC_011981.1 nodulation protein T precursor 446260 nodT 7380041 nodT Agrobacterium vitis S4 nodulation protein T precursor YP_002539822.1 444788 R 311402 CDS YP_002539823.1 222102784 7380042 446416..447102 1 NC_011981.1 two component response regulator 447102 chvI 7380042 chvI Agrobacterium vitis S4 two component response regulator YP_002539823.1 446416 D 311402 CDS YP_002539824.1 222102785 7380043 447102..448373 1 NC_011981.1 Signal transduction histidine kinase 448373 7380043 Avi_7490 Agrobacterium vitis S4 Signal transduction histidine kinase YP_002539824.1 447102 D 311402 CDS YP_002539825.1 222102786 7380046 complement(449507..450397) 1 NC_011981.1 LysR family transcriptional regulator 450397 gstR 7380046 gstR Agrobacterium vitis S4 LysR family transcriptional regulator YP_002539825.1 449507 R 311402 CDS YP_002539826.1 222102787 7380047 complement(450527..451267) 1 NC_011981.1 hypothetical protein 451267 7380047 Avi_7498 Agrobacterium vitis S4 hypothetical protein YP_002539826.1 450527 R 311402 CDS YP_002539827.1 222102788 7380048 complement(451681..452448) 1 NC_011981.1 transposase 452448 7380048 Avi_7500 Agrobacterium vitis S4 transposase YP_002539827.1 451681 R 311402 CDS YP_002539828.1 222102789 7380049 complement(452804..453727) 1 NC_011981.1 regulator protein pecM 453727 pecM 7380049 pecM Agrobacterium vitis S4 regulator protein pecM YP_002539828.1 452804 R 311402 CDS YP_002539829.1 222102790 7380050 complement(454438..455295) 1 NC_011981.1 IS3 family transposase 455295 orfB 7380050 orfB Agrobacterium vitis S4 IS3 family transposase YP_002539829.1 454438 R 311402 CDS YP_002539830.1 222102791 7380051 complement(455324..455677) 1 NC_011981.1 hypothetical protein 455677 7380051 Avi_7505 Agrobacterium vitis S4 hypothetical protein YP_002539830.1 455324 R 311402 CDS YP_002539831.1 222102792 7380052 complement(455701..456381) 1 NC_011981.1 nopaline ABC transporter permease 456381 nocM 7380052 nocM Agrobacterium vitis S4 nopaline ABC transporter permease YP_002539831.1 455701 R 311402 CDS YP_002539832.1 222102793 7380053 complement(456383..457096) 1 NC_011981.1 nopaline ABC transporter permease 457096 nocQ 7380053 nocQ Agrobacterium vitis S4 nopaline ABC transporter permease YP_002539832.1 456383 R 311402 CDS YP_002539833.1 222102794 7380054 complement(457157..457975) 1 NC_011981.1 amino acid ABC transporter substrate-binding protein 457975 7380054 Avi_7508 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002539833.1 457157 R 311402 CDS YP_002539834.1 222102795 7380055 complement(458014..458790) 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (nopaline) 458790 nocP 7380055 nocP Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (nopaline) YP_002539834.1 458014 R 311402 CDS YP_002539835.1 222102796 7380056 complement(458809..460212) 1 NC_011981.1 hypothetical protein 460212 bioA 7380056 bioA Agrobacterium vitis S4 hypothetical protein YP_002539835.1 458809 R 311402 CDS YP_002539836.1 222102797 7380057 460437..460913 1 NC_011981.1 transcriptional regulator AsnC family 460913 7380057 Avi_7513 Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002539836.1 460437 D 311402 CDS YP_002539837.1 222102798 7380058 461338..461610 1 NC_011981.1 transposase 461610 7380058 Avi_7514 Agrobacterium vitis S4 transposase YP_002539837.1 461338 D 311402 CDS YP_002539838.1 222102799 7380059 462221..463141 1 NC_011981.1 carboxyphosphonoenolpyruvate phosphonomutase (CPEP Phosphonomutase) 463141 7380059 Avi_7515 Agrobacterium vitis S4 carboxyphosphonoenolpyruvate phosphonomutase (CPEP Phosphonomutase) YP_002539838.1 462221 D 311402 CDS YP_002539839.1 222102800 7380060 463236..464933 1 NC_011981.1 ABC transporter substrate binding protein (oligopeptide) 464933 7380060 Avi_7516 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002539839.1 463236 D 311402 CDS YP_002539840.1 222102801 7380061 464930..465883 1 NC_011981.1 peptide ABC transporter permease 465883 dppB 7380061 dppB Agrobacterium vitis S4 peptide ABC transporter permease YP_002539840.1 464930 D 311402 CDS YP_002539841.1 222102802 7380062 465891..466778 1 NC_011981.1 peptide ABC transporter permease 466778 dppC 7380062 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002539841.1 465891 D 311402 CDS YP_002539842.1 222102803 7380063 466778..467803 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 467803 7380063 Avi_7520 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539842.1 466778 D 311402 CDS YP_002539843.1 222102804 7380064 467800..468792 1 NC_011981.1 ABC transporter ATPase 468792 moaD 7380064 moaD Agrobacterium vitis S4 ABC transporter ATPase YP_002539843.1 467800 D 311402 CDS YP_002539844.1 222102805 7380065 468870..470054 1 NC_011981.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 470054 7380065 Avi_7524 Agrobacterium vitis S4 aromatic amino acid aminotransferase YP_002539844.1 468870 D 311402 CDS YP_002539845.1 222102806 7380066 complement(470060..471931) 1 NC_011981.1 LysR family transcriptional regulator 471931 nocR 7380066 nocR Agrobacterium vitis S4 LysR family transcriptional regulator YP_002539845.1 470060 R 311402 CDS YP_002539846.1 222102807 7380067 472246..473613 1 NC_011981.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473613 7380067 Avi_7527 Agrobacterium vitis S4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002539846.1 472246 D 311402 CDS YP_002539847.1 222102808 7380068 473610..474185 1 NC_011981.1 3-polyprenyl-4-hydroxybenzoate decarboxylase 474185 7380068 Avi_7528 Agrobacterium vitis S4 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_002539847.1 473610 D 311402 CDS YP_002539848.1 222102809 7380069 474294..475919 1 NC_011981.1 ABC transporter substrate binding protein (dipeptide) 475919 dppA 7380069 dppA Agrobacterium vitis S4 ABC transporter substrate binding protein (dipeptide) YP_002539848.1 474294 D 311402 CDS YP_002539849.1 222102810 7380070 475985..476917 1 NC_011981.1 carboxyphosphonoenolpyruvate phosphonomutase 476917 7380070 Avi_7530 Agrobacterium vitis S4 carboxyphosphonoenolpyruvate phosphonomutase YP_002539849.1 475985 D 311402 CDS YP_002539850.1 222102811 7380071 476889..478061 1 NC_011981.1 peptide ABC transporter permease 478061 dppB 7380071 dppB Agrobacterium vitis S4 peptide ABC transporter permease YP_002539850.1 476889 D 311402 CDS YP_002539851.1 222102812 7380072 478058..478978 1 NC_011981.1 peptide ABC transporter permease 478978 dppC 7380072 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002539851.1 478058 D 311402 CDS YP_002539852.1 222102813 7380073 478980..479993 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 479993 7380073 Avi_7533 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539852.1 478980 D 311402 CDS YP_002539853.1 222102814 7380074 479986..480963 1 NC_011981.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 480963 7380074 Avi_7536 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002539853.1 479986 D 311402 CDS YP_002539854.1 222102815 7380075 480974..481495 1 NC_011981.1 hypothetical protein 481495 7380075 Avi_7537 Agrobacterium vitis S4 hypothetical protein YP_002539854.1 480974 D 311402 CDS YP_002539855.1 222102816 7380076 481492..482868 1 NC_011981.1 allantoinase protein 482868 7380076 Avi_7538 Agrobacterium vitis S4 allantoinase protein YP_002539855.1 481492 D 311402 CDS YP_002539856.1 222102817 7380077 482873..484132 1 NC_011981.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 484132 amaB 7380077 amaB Agrobacterium vitis S4 allantoate amidohydrolase YP_002539856.1 482873 D 311402 CDS YP_002539857.1 222102818 7380078 484241..485854 1 NC_011981.1 histidine ammonia-lyase 485854 hutH 7380078 hutH Agrobacterium vitis S4 histidine ammonia-lyase YP_002539857.1 484241 D 311402 CDS YP_002539858.1 222102819 7380079 485953..486312 1 NC_011981.1 transposase 486312 7380079 Avi_7541 Agrobacterium vitis S4 transposase YP_002539858.1 485953 D 311402 CDS YP_002539859.1 222102820 7380080 complement(486526..488442) 1 NC_011981.1 hypothetical protein 488442 7380080 Avi_7543 Agrobacterium vitis S4 hypothetical protein YP_002539859.1 486526 R 311402 CDS YP_002539860.1 222102821 7380081 complement(488445..489587) 1 NC_011981.1 von Willebrand factor type A (vWA) domain-containing protein 489587 7380081 Avi_7544 Agrobacterium vitis S4 von Willebrand factor type A (vWA) domain-containing protein YP_002539860.1 488445 R 311402 CDS YP_002539861.1 222102822 7380082 complement(489584..493573) 1 NC_011981.1 dihydrolipoamide acetyltransferase 493573 aceF 7380082 aceF Agrobacterium vitis S4 dihydrolipoamide acetyltransferase YP_002539861.1 489584 R 311402 CDS YP_002539862.1 222102823 7380083 complement(493596..495890) 1 NC_011981.1 hypothetical protein 495890 7380083 Avi_7548 Agrobacterium vitis S4 hypothetical protein YP_002539862.1 493596 R 311402 CDS YP_002539863.1 222102824 7380084 complement(495898..496989) 1 NC_011981.1 moxR-like ATPase 496989 7380084 Avi_7549 Agrobacterium vitis S4 moxR-like ATPase YP_002539863.1 495898 R 311402 CDS YP_002539864.1 222102825 7380085 complement(497289..498467) 1 NC_011981.1 adenylosuccinate synthetase 498467 purA 7380085 purA Agrobacterium vitis S4 adenylosuccinate synthetase YP_002539864.1 497289 R 311402 CDS YP_002539865.1 222102826 7380086 complement(498464..499396) 1 NC_011981.1 hypothetical protein 499396 7380086 Avi_7551 Agrobacterium vitis S4 hypothetical protein YP_002539865.1 498464 R 311402 CDS YP_002539866.1 222102827 7380087 complement(499389..500414) 1 NC_011981.1 hypothetical protein 500414 7380087 Avi_7552 Agrobacterium vitis S4 hypothetical protein YP_002539866.1 499389 R 311402 CDS YP_002539867.1 222102828 7380088 500590..501249 1 NC_011981.1 hypothetical protein 501249 7380088 Avi_7553 Agrobacterium vitis S4 hypothetical protein YP_002539867.1 500590 D 311402 CDS YP_002539868.1 222102829 7380089 complement(501813..502559) 1 NC_011981.1 hypothetical protein 502559 7380089 Avi_7554 Agrobacterium vitis S4 hypothetical protein YP_002539868.1 501813 R 311402 CDS YP_002539869.1 222102830 7380090 503466..505427 1 NC_011981.1 vgrG protein 505427 vgrG 7380090 vgrG Agrobacterium vitis S4 vgrG protein YP_002539869.1 503466 D 311402 CDS YP_002539870.1 222102831 7380091 505592..506602 1 NC_011981.1 hypothetical protein 506602 7380091 Avi_7558 Agrobacterium vitis S4 hypothetical protein YP_002539870.1 505592 D 311402 CDS YP_002539871.1 222102832 7380092 506592..507974 1 NC_011981.1 phospholipase A1 507974 7380092 Avi_7559 Agrobacterium vitis S4 phospholipase A1 YP_002539871.1 506592 D 311402 CDS YP_002539872.1 222102833 7380093 507987..509033 1 NC_011981.1 hypothetical protein 509033 7380093 Avi_7560 Agrobacterium vitis S4 hypothetical protein YP_002539872.1 507987 D 311402 CDS YP_002539873.1 222102834 7380094 509109..509534 1 NC_011981.1 hypothetical protein 509534 7380094 Avi_7561 Agrobacterium vitis S4 hypothetical protein YP_002539873.1 509109 D 311402 CDS YP_002539874.1 222102835 7380095 complement(510082..510786) 1 NC_011981.1 hypothetical protein 510786 7380095 Avi_7563 Agrobacterium vitis S4 hypothetical protein YP_002539874.1 510082 R 311402 CDS YP_002539875.1 222102836 7380096 complement(510783..511328) 1 NC_011981.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 511328 7380096 Avi_7564 Agrobacterium vitis S4 RNA polymerase sigma factor YP_002539875.1 510783 R 311402 CDS YP_002539876.1 222102837 7380097 511533..512321 1 NC_011981.1 hypothetical protein 512321 7380097 Avi_7565 Agrobacterium vitis S4 hypothetical protein YP_002539876.1 511533 D 311402 CDS YP_002539877.1 222102838 7380098 512660..513391 1 NC_011981.1 transposase 513391 tnp 7380098 tnp Agrobacterium vitis S4 transposase YP_002539877.1 512660 D 311402 CDS YP_002539878.1 222102839 7380099 complement(513930..514610) 1 NC_011981.1 hypothetical protein 514610 7380099 Avi_7569 Agrobacterium vitis S4 hypothetical protein YP_002539878.1 513930 R 311402 CDS YP_002539879.1 222102840 7380100 complement(514622..515998) 1 NC_011981.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 515998 7380100 Avi_7570 Agrobacterium vitis S4 glucose-6-phosphate 1-dehydrogenase YP_002539879.1 514622 R 311402 CDS YP_002539880.1 222102841 7380101 complement(515995..517008) 1 NC_011981.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase-like protein 517008 7380101 Avi_7571 Agrobacterium vitis S4 6-phosphogluconate dehydrogenase-like protein YP_002539880.1 515995 R 311402 CDS YP_002539881.1 222102842 7380102 complement(517027..519432) 1 NC_011981.1 glucan 1,4-alpha-glucosidase 519432 7380102 Avi_7572 Agrobacterium vitis S4 glucan 1,4-alpha-glucosidase YP_002539881.1 517027 R 311402 CDS YP_002539882.1 222102843 7380103 complement(519622..521025) 1 NC_011981.1 GntR family transcriptional regulator 521025 7380103 Avi_7573 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002539882.1 519622 R 311402 CDS YP_002539883.1 222102844 7380104 521364..521846 1 NC_011981.1 hypothetical protein 521846 7380104 Avi_7575 Agrobacterium vitis S4 hypothetical protein YP_002539883.1 521364 D 311402 CDS YP_002539884.1 222102845 7380105 521926..522969 1 NC_011981.1 amidohydrolase 522969 7380105 Avi_7576 Agrobacterium vitis S4 amidohydrolase YP_002539884.1 521926 D 311402 CDS YP_002539885.1 222102846 7380106 523043..524014 1 NC_011981.1 Biotin synthase-related enzyme 524014 7380106 Avi_7577 Agrobacterium vitis S4 Biotin synthase-related enzyme YP_002539885.1 523043 D 311402 CDS YP_002539886.1 222102847 7380107 524011..524553 1 NC_011981.1 GCN5 family N-acetyltransferase 524553 7380107 Avi_7578 Agrobacterium vitis S4 GCN5 family N-acetyltransferase YP_002539886.1 524011 D 311402 CDS YP_002539887.1 222102848 7380108 524556..525542 1 NC_011981.1 selenophosphate synthetase-related protein 525542 7380108 Avi_7579 Agrobacterium vitis S4 selenophosphate synthetase-related protein YP_002539887.1 524556 D 311402 CDS YP_002539888.1 222102849 7380109 525563..526696 1 NC_011981.1 WbdA; mannosyl transferase A 526696 7380109 Avi_7580 Agrobacterium vitis S4 WbdA; mannosyl transferase A YP_002539888.1 525563 D 311402 CDS YP_002539889.1 222102850 7380110 526698..526976 1 NC_011981.1 hypothetical protein 526976 7380110 Avi_7582 Agrobacterium vitis S4 hypothetical protein YP_002539889.1 526698 D 311402 CDS YP_002539890.1 222102851 7380241 526988..528259 1 NC_011981.1 flavin-containing monooxygenase 528259 7380241 Avi_7583 Agrobacterium vitis S4 flavin-containing monooxygenase YP_002539890.1 526988 D 311402 CDS YP_002539891.1 222102852 7380242 528320..529129 1 NC_011981.1 yype IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV) B subunit 529129 7380242 Avi_7584 Agrobacterium vitis S4 yype IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV) B subunit YP_002539891.1 528320 D 311402 CDS YP_002539892.1 222102853 7380243 529444..530520 1 NC_011981.1 Catalase 530520 7380243 Avi_7585 Agrobacterium vitis S4 Catalase YP_002539892.1 529444 D 311402 CDS YP_002539893.1 222102854 7380244 530551..532887 1 NC_011981.1 formate dehydrogenase H alpha subunit 532887 fdhF 7380244 fdhF Agrobacterium vitis S4 formate dehydrogenase H alpha subunit YP_002539893.1 530551 D 311402 CDS YP_002539894.1 222102855 7380245 complement(532931..533443) 1 NC_011981.1 acetyltransferase 533443 7380245 Avi_7587 Agrobacterium vitis S4 acetyltransferase YP_002539894.1 532931 R 311402 CDS YP_002539895.1 222102856 7380246 complement(533454..534329) 1 NC_011981.1 hypothetical protein 534329 7380246 Avi_7588 Agrobacterium vitis S4 hypothetical protein YP_002539895.1 533454 R 311402 CDS YP_002539896.1 222102857 7380247 complement(534339..535175) 1 NC_011981.1 hypothetical protein 535175 7380247 Avi_7589 Agrobacterium vitis S4 hypothetical protein YP_002539896.1 534339 R 311402 CDS YP_002539897.1 222102858 7380248 complement(535272..536615) 1 NC_011981.1 ABC transporter substrate binding protein (sugar) 536615 7380248 Avi_7590 Agrobacterium vitis S4 ABC transporter substrate binding protein (sugar) YP_002539897.1 535272 R 311402 CDS YP_002539898.1 222102859 7380249 complement(536612..537439) 1 NC_011981.1 ABC transporter permease 537439 7380249 Avi_7591 Agrobacterium vitis S4 ABC transporter permease YP_002539898.1 536612 R 311402 CDS YP_002539899.1 222102860 7380250 complement(537439..538359) 1 NC_011981.1 ABC transporter 538359 7380250 Avi_7592 Agrobacterium vitis S4 ABC transporter YP_002539899.1 537439 R 311402 CDS YP_002539900.1 222102861 7380251 complement(538343..539536) 1 NC_011981.1 ABC transporter ATPase 539536 7380251 Avi_7593 Agrobacterium vitis S4 ABC transporter ATPase YP_002539900.1 538343 R 311402 CDS YP_002539901.1 222102862 7380252 539865..540536 1 NC_011981.1 TetR family transcriptional regulator 540536 7380252 Avi_7595 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002539901.1 539865 D 311402 CDS YP_002539902.1 222102863 7380253 540758..541576 1 NC_011981.1 non-heme chloroperoxidase 541576 prxC 7380253 prxC Agrobacterium vitis S4 non-heme chloroperoxidase YP_002539902.1 540758 D 311402 CDS YP_002539903.1 222102864 7380254 complement(541652..542314) 1 NC_011981.1 hypothetical protein 542314 7380254 Avi_7599 Agrobacterium vitis S4 hypothetical protein YP_002539903.1 541652 R 311402 CDS YP_002539904.1 222102865 7380255 complement(542316..543740) 1 NC_011981.1 proline dipeptidase 543740 pepQ 7380255 pepQ Agrobacterium vitis S4 proline dipeptidase YP_002539904.1 542316 R 311402 CDS YP_002539905.1 222102866 7380256 complement(543769..544590) 1 NC_011981.1 ABC transporter permease 544590 7380256 Avi_7601 Agrobacterium vitis S4 ABC transporter permease YP_002539905.1 543769 R 311402 CDS YP_002539906.1 222102867 7380257 complement(544583..545410) 1 NC_011981.1 ABC transporter permease 545410 7380257 Avi_7602 Agrobacterium vitis S4 ABC transporter permease YP_002539906.1 544583 R 311402 CDS YP_002539907.1 222102868 7380258 complement(545420..546460) 1 NC_011981.1 ABC transporter substrate-binding protein 546460 7380258 Avi_7603 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002539907.1 545420 R 311402 CDS YP_002539908.1 222102869 7380259 complement(546481..547722) 1 NC_011981.1 ABC transporter ATPase 547722 7380259 Avi_7604 Agrobacterium vitis S4 ABC transporter ATPase YP_002539908.1 546481 R 311402 CDS YP_002539909.1 222102870 7380260 548168..549157 1 NC_011981.1 amino acid ABC transporter substrate-binding protein 549157 7380260 Avi_7606 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002539909.1 548168 D 311402 CDS YP_002539910.1 222102871 7380261 549161..550033 1 NC_011981.1 amino acid ABC transporter permease 550033 7380261 Avi_7608 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002539910.1 549161 D 311402 CDS YP_002539911.1 222102872 7380262 550112..551242 1 NC_011981.1 hypothetical protein 551242 7380262 Avi_7610 Agrobacterium vitis S4 hypothetical protein YP_002539911.1 550112 D 311402 CDS YP_002539912.1 222102873 7380263 551525..552277 1 NC_011981.1 GntR family transcriptional regulator 552277 7380263 Avi_7611 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002539912.1 551525 D 311402 CDS YP_002539913.1 222102874 7380264 complement(552863..553261) 1 NC_011981.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 553261 7380264 Avi_7612 Agrobacterium vitis S4 nickel responsive regulator YP_002539913.1 552863 R 311402 CDS YP_002539914.1 222102875 7380265 553410..554990 1 NC_011981.1 nickel ABC transporter periplasmic nickel-binding protein 554990 nikA 7380265 nikA Agrobacterium vitis S4 nickel ABC transporter periplasmic nickel-binding protein YP_002539914.1 553410 D 311402 CDS YP_002539915.1 222102876 7380266 554994..555938 1 NC_011981.1 with NikACDE is involved in nickel transport into the cell; nickel transporter permease NikB 555938 nikB 7380266 nikB Agrobacterium vitis S4 nickel transporter permease NikB YP_002539915.1 554994 D 311402 CDS YP_002539916.1 222102877 7380267 555935..556810 1 NC_011981.1 with NikABDE is involved in nickel transport into the cell; nickel transporter permease NikC 556810 nikC 7380267 nikC Agrobacterium vitis S4 nickel transporter permease NikC YP_002539916.1 555935 D 311402 CDS YP_002539917.1 222102878 7380268 556807..557595 1 NC_011981.1 with NikABCE is involved in nickel transport into the cell; nickel transporter ATP-binding protein NikD 557595 nikD 7380268 nikD Agrobacterium vitis S4 nickel transporter ATP-binding protein NikD YP_002539917.1 556807 D 311402 CDS YP_002539918.1 222102879 7380269 557592..558386 1 NC_011981.1 with NikABCD is involved with nickel transport into the cell; nickel transporter ATP-binding protein NikE 558386 nikE 7380269 nikE Agrobacterium vitis S4 nickel transporter ATP-binding protein NikE YP_002539918.1 557592 D 311402 CDS YP_002539919.1 222102880 7380270 558560..558955 1 NC_011981.1 hypothetical protein 558955 7380270 Avi_7619 Agrobacterium vitis S4 hypothetical protein YP_002539919.1 558560 D 311402 CDS YP_002539920.1 222102881 7380271 559070..559768 1 NC_011981.1 transcriptional activator Crp family 559768 fnrN 7380271 fnrN Agrobacterium vitis S4 transcriptional activator Crp family YP_002539920.1 559070 D 311402 CDS YP_002539921.1 222102882 7380272 559787..561076 1 NC_011981.1 ABC transporter substrate binding protein (iron) 561076 7380272 Avi_7622 Agrobacterium vitis S4 ABC transporter substrate binding protein (iron) YP_002539921.1 559787 D 311402 CDS YP_002539922.1 222102883 7380273 561073..562137 1 NC_011981.1 Fe3+ ABC transporter permease 562137 7380273 Avi_7623 Agrobacterium vitis S4 Fe3+ ABC transporter permease YP_002539922.1 561073 D 311402 CDS YP_002539923.1 222102884 7380274 562134..562919 1 NC_011981.1 ABC transporter 562919 7380274 Avi_7625 Agrobacterium vitis S4 ABC transporter YP_002539923.1 562134 D 311402 CDS YP_002539924.1 222102885 7380275 562916..563839 1 NC_011981.1 hypothetical protein 563839 7380275 Avi_7626 Agrobacterium vitis S4 hypothetical protein YP_002539924.1 562916 D 311402 CDS YP_002539925.1 222102886 7380276 563836..564495 1 NC_011981.1 electron transport protein 564495 sco1 7380276 sco1 Agrobacterium vitis S4 electron transport protein YP_002539925.1 563836 D 311402 CDS YP_002539926.1 222102887 7380277 564492..565277 1 NC_011981.1 intracellular protease/amidase 565277 7380277 Avi_7628 Agrobacterium vitis S4 intracellular protease/amidase YP_002539926.1 564492 D 311402 CDS YP_002539927.1 222102888 7380278 complement(565611..566639) 1 NC_011981.1 molybdenum cofactor biosynthesis protein A 566639 moaA 7380278 moaA Agrobacterium vitis S4 molybdenum cofactor biosynthesis protein A YP_002539927.1 565611 R 311402 CDS YP_002539928.1 222102889 7380279 complement(566633..567988) 1 NC_011981.1 hypothetical protein 567988 7380279 Avi_7630 Agrobacterium vitis S4 hypothetical protein YP_002539928.1 566633 R 311402 CDS YP_002539929.1 222102890 7380280 complement(567985..568290) 1 NC_011981.1 ferredoxin 568290 fdxA 7380280 fdxA Agrobacterium vitis S4 ferredoxin YP_002539929.1 567985 R 311402 CDS YP_002539930.1 222102891 7380281 complement(568363..570489) 1 NC_011981.1 reductase 570489 7380281 Avi_7633 Agrobacterium vitis S4 reductase YP_002539930.1 568363 R 311402 CDS YP_002539931.1 222102892 7380282 570675..571589 1 NC_011981.1 AraC family transcriptional regulator 571589 7380282 Avi_7634 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002539931.1 570675 D 311402 CDS YP_002539932.1 222102893 7380283 572212..573078 1 NC_011981.1 AraC family transcriptional regulator 573078 7380283 Avi_7635 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002539932.1 572212 D 311402 CDS YP_002539933.1 222102894 7380284 complement(573139..574389) 1 NC_011981.1 Acyl-CoA dehydrogenase 574389 7380284 Avi_7637 Agrobacterium vitis S4 Acyl-CoA dehydrogenase YP_002539933.1 573139 R 311402 CDS YP_002539934.1 222102895 7380285 574970..576937 1 NC_011981.1 hypothetical protein 576937 7380285 Avi_7641 Agrobacterium vitis S4 hypothetical protein YP_002539934.1 574970 D 311402 CDS YP_002539935.1 222102896 7380286 complement(577013..578740) 1 NC_011981.1 sensory methylation accepting chemotaxis protein 578740 7380286 Avi_7643 Agrobacterium vitis S4 sensory methylation accepting chemotaxis protein YP_002539935.1 577013 R 311402 CDS YP_002539936.1 222102897 7380287 579230..580588 1 NC_011981.1 hypothetical protein 580588 7380287 Avi_7645 Agrobacterium vitis S4 hypothetical protein YP_002539936.1 579230 D 311402 CDS YP_002539937.1 222102898 7380288 580634..582223 1 NC_011981.1 TPR repeat-containing protein 582223 7380288 Avi_7646 Agrobacterium vitis S4 TPR repeat-containing protein YP_002539937.1 580634 D 311402 CDS YP_002539938.1 222102899 7380289 582859..584745 1 NC_011981.1 transcriptional regulator 584745 acoR 7380289 acoR Agrobacterium vitis S4 transcriptional regulator YP_002539938.1 582859 D 311402 CDS YP_002539939.1 222102900 7380290 584910..585983 1 NC_011981.1 zinc-binding dehydrogenase 585983 7380290 Avi_7649 Agrobacterium vitis S4 zinc-binding dehydrogenase YP_002539939.1 584910 D 311402 CDS YP_002539940.1 222102901 7380291 586099..587901 1 NC_011981.1 flavin-containing monooxygenase 587901 7380291 Avi_7650 Agrobacterium vitis S4 flavin-containing monooxygenase YP_002539940.1 586099 D 311402 CDS YP_002539941.1 222102902 7380292 complement(588203..588877) 1 NC_011981.1 demethylmenaquinone methyltransferase 588877 menG 7380292 menG Agrobacterium vitis S4 demethylmenaquinone methyltransferase YP_002539941.1 588203 R 311402 CDS YP_002539942.1 222102903 7380293 589053..589952 1 NC_011981.1 Transcriptional regulator 589952 7380293 Avi_7653 Agrobacterium vitis S4 Transcriptional regulator YP_002539942.1 589053 D 311402 CDS YP_002539943.1 222102904 7380294 590128..590547 1 NC_011981.1 acetyl-CoA carboxylase biotin carboxyl carrier protein 590547 accB 7380294 accB Agrobacterium vitis S4 acetyl-CoA carboxylase biotin carboxyl carrier protein YP_002539943.1 590128 D 311402 CDS YP_002539944.1 222102905 7380295 590544..591917 1 NC_011981.1 acetyl-CoA carboxylase biotin carboxylase 591917 accC 7380295 accC Agrobacterium vitis S4 acetyl-CoA carboxylase biotin carboxylase YP_002539944.1 590544 D 311402 CDS YP_002539945.1 222102906 7380296 591914..592357 1 NC_011981.1 hypothetical protein 592357 7380296 Avi_7656 Agrobacterium vitis S4 hypothetical protein YP_002539945.1 591914 D 311402 CDS YP_002539946.1 222102907 7380297 592357..593067 1 NC_011981.1 hypothetical protein 593067 7380297 Avi_7657 Agrobacterium vitis S4 hypothetical protein YP_002539946.1 592357 D 311402 CDS YP_002539947.1 222102908 7380298 593064..594062 1 NC_011981.1 hypothetical protein 594062 7380298 Avi_7658 Agrobacterium vitis S4 hypothetical protein YP_002539947.1 593064 D 311402 CDS YP_002539948.1 222102909 7380299 594078..594845 1 NC_011981.1 LamB/YcsF family protein 594845 7380299 Avi_7659 Agrobacterium vitis S4 LamB/YcsF family protein YP_002539948.1 594078 D 311402 CDS YP_002539949.1 222102910 7380300 594894..596108 1 NC_011981.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 596108 aatA 7380300 aatA Agrobacterium vitis S4 aspartate aminotransferase YP_002539949.1 594894 D 311402 CDS YP_002539950.1 222102911 7380301 complement(596173..597078) 1 NC_011981.1 LysR family transcriptional regulator 597078 nac 7380301 nac Agrobacterium vitis S4 LysR family transcriptional regulator YP_002539950.1 596173 R 311402 CDS YP_002539951.1 222102912 7380302 597318..598070 1 NC_011981.1 short-chain dehydrogenase 598070 7380302 Avi_7662 Agrobacterium vitis S4 short-chain dehydrogenase YP_002539951.1 597318 D 311402 CDS YP_002539952.1 222102913 7380303 598067..598774 1 NC_011981.1 amino acid ABC transporter permease 598774 7380303 Avi_7663 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002539952.1 598067 D 311402 CDS YP_002539953.1 222102914 7380304 598771..599523 1 NC_011981.1 amino acid ABC transporter permease 599523 7380304 Avi_7664 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002539953.1 598771 D 311402 CDS YP_002539954.1 222102915 7380305 599529..600296 1 NC_011981.1 ABC transporter ATPase 600296 7380305 Avi_7665 Agrobacterium vitis S4 ABC transporter ATPase YP_002539954.1 599529 D 311402 CDS YP_002539955.1 222102916 7380306 600370..601209 1 NC_011981.1 amino acid ABC transporter substrate-binding protein 601209 7380306 Avi_7667 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002539955.1 600370 D 311402 CDS YP_002539956.1 222102917 7380307 601422..601793 1 NC_011981.1 transposase 601793 7380307 Avi_7669 Agrobacterium vitis S4 transposase YP_002539956.1 601422 D 311402 CDS YP_002539957.1 222102918 7380308 601790..602185 1 NC_011981.1 transposase 602185 7380308 Avi_7671 Agrobacterium vitis S4 transposase YP_002539957.1 601790 D 311402 CDS YP_002539958.1 222102919 7380309 complement(602286..602615) 1 NC_011981.1 methyl-accepting chemotaxis protein 602615 7380309 Avi_7673 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002539958.1 602286 R 311402 CDS YP_002539959.1 222102920 7380310 complement(602711..604411) 1 NC_011981.1 oxidoreductase 604411 7380310 Avi_7674 Agrobacterium vitis S4 oxidoreductase YP_002539959.1 602711 R 311402 CDS YP_002539960.1 222102921 7380311 complement(604414..605730) 1 NC_011981.1 hypothetical protein 605730 7380311 Avi_7675 Agrobacterium vitis S4 hypothetical protein YP_002539960.1 604414 R 311402 CDS YP_002539961.1 222102922 7380312 complement(605730..607205) 1 NC_011981.1 FAD dependent oxidoreductase 607205 7380312 Avi_7676 Agrobacterium vitis S4 FAD dependent oxidoreductase YP_002539961.1 605730 R 311402 CDS YP_002539962.1 222102923 7380313 607733..608221 1 NC_011981.1 hypothetical protein 608221 7380313 Avi_7677 Agrobacterium vitis S4 hypothetical protein YP_002539962.1 607733 D 311402 CDS YP_002539963.1 222102924 7380314 608583..609776 1 NC_011981.1 Permeases of the major facilitator superfamily 609776 7380314 Avi_7679 Agrobacterium vitis S4 Permeases of the major facilitator superfamily YP_002539963.1 608583 D 311402 CDS YP_002539964.1 222102925 7380315 609978..611372 1 NC_011981.1 porin B 611372 7380315 Avi_7680 Agrobacterium vitis S4 porin B YP_002539964.1 609978 D 311402 CDS YP_002539965.1 222102926 7380316 complement(611605..612105) 1 NC_011981.1 CbaR 612105 7380316 Avi_7681 Agrobacterium vitis S4 CbaR YP_002539965.1 611605 R 311402 CDS YP_002539966.1 222102927 7380317 complement(612135..613373) 1 NC_011981.1 ferredoxin reductase 613373 7380317 Avi_7682 Agrobacterium vitis S4 ferredoxin reductase YP_002539966.1 612135 R 311402 CDS YP_002539967.1 222102928 7380318 complement(613702..614919) 1 NC_011981.1 cytochrome P450 hydroxylase 614919 7380318 Avi_7683 Agrobacterium vitis S4 cytochrome P450 hydroxylase YP_002539967.1 613702 R 311402 CDS YP_002539968.1 222102929 7380319 complement(615296..615505) 1 NC_011981.1 transposase 615505 7380319 Avi_7685 Agrobacterium vitis S4 transposase YP_002539968.1 615296 R 311402 CDS YP_002539969.1 222102930 7380320 complement(615820..617247) 1 NC_011981.1 NAD-dependent succinate aldehyde dehydrogenase 617247 attK 7380320 attK Agrobacterium vitis S4 NAD-dependent succinate aldehyde dehydrogenase YP_002539969.1 615820 R 311402 CDS YP_002539970.1 222102931 7380321 complement(617309..618811) 1 NC_011981.1 long-chain-fatty-acid-CoA-ligase 618811 fadD 7380321 fadD Agrobacterium vitis S4 long-chain-fatty-acid-CoA-ligase YP_002539970.1 617309 R 311402 CDS YP_002539971.1 222102932 7380322 complement(619051..620067) 1 NC_011981.1 transcriptional regulatory protein 620067 7380322 Avi_7688 Agrobacterium vitis S4 transcriptional regulatory protein YP_002539971.1 619051 R 311402 CDS YP_002539972.1 222102933 7380323 620258..621793 1 NC_011981.1 3-methylcrotonoyl-CoA carboxylase beta subunit 621793 mccB 7380323 mccB Agrobacterium vitis S4 3-methylcrotonoyl-CoA carboxylase beta subunit YP_002539972.1 620258 D 311402 CDS YP_002539973.1 222102934 7380193 621801..622601 1 NC_011981.1 Enoyl-CoA hydratase/isomerase family protein 622601 7380193 Avi_7690 Agrobacterium vitis S4 Enoyl-CoA hydratase/isomerase family protein YP_002539973.1 621801 D 311402 CDS YP_002539974.1 222102935 7380194 622613..624601 1 NC_011981.1 acetyl-CoA carboxylase biotin carboxylase 624601 accC 7380194 accC Agrobacterium vitis S4 acetyl-CoA carboxylase biotin carboxylase YP_002539974.1 622613 D 311402 CDS YP_002539975.1 222102936 7380195 624612..625535 1 NC_011981.1 hydroxymethylglutaryl-CoA lyase 625535 hmgL 7380195 hmgL Agrobacterium vitis S4 hydroxymethylglutaryl-CoA lyase YP_002539975.1 624612 D 311402 CDS YP_002539976.1 222102937 7380196 complement(626117..626932) 1 NC_011981.1 transcriptional regulator MerR family 626932 7380196 Avi_7693 Agrobacterium vitis S4 transcriptional regulator MerR family YP_002539976.1 626117 R 311402 CDS YP_002539977.1 222102938 7380197 627075..628355 1 NC_011981.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 628355 argD 7380197 argD Agrobacterium vitis S4 4-aminobutyrate aminotransferase YP_002539977.1 627075 D 311402 CDS YP_002539978.1 222102939 7380198 complement(628382..628708) 1 NC_011981.1 hypothetical protein 628708 7380198 Avi_7695 Agrobacterium vitis S4 hypothetical protein YP_002539978.1 628382 R 311402 CDS YP_002539979.1 222102940 7380200 629087..630115 1 NC_011981.1 IS1111A/IS1328/IS1533 family transposase 630115 7380200 Avi_7698 Agrobacterium vitis S4 IS1111A/IS1328/IS1533 family transposase YP_002539979.1 629087 D 311402 CDS YP_002539980.1 222102941 7380201 complement(630217..631296) 1 NC_011981.1 IS3 family transposase 631296 orfB 7380201 orfB Agrobacterium vitis S4 IS3 family transposase YP_002539980.1 630217 R 311402 CDS YP_002539981.1 222080118 7365286 136..1251 1 NC_011982.1 replication protein A 1251 repA 7365286 repA Agrobacterium vitis S4 replication protein A YP_002539981.1 136 D 311402 CDS YP_002539982.1 222080119 7365133 1336..2331 1 NC_011982.1 replication protein B 2331 repB 7365133 repB Agrobacterium vitis S4 replication protein B YP_002539982.1 1336 D 311402 CDS YP_002539983.1 222080120 7365134 2487..3731 1 NC_011982.1 replication initiation protein RepC 3731 repC 7365134 repC Agrobacterium vitis S4 replication initiation protein RepC YP_002539983.1 2487 D 311402 CDS YP_002539984.1 222080121 7365135 3966..5258 1 NC_011982.1 hypothetical protein 5258 7365135 Avi_8003 Agrobacterium vitis S4 hypothetical protein YP_002539984.1 3966 D 311402 CDS YP_002539985.1 222080122 7365136 complement(5296..6183) 1 NC_011982.1 hypothetical protein 6183 7365136 Avi_8004 Agrobacterium vitis S4 hypothetical protein YP_002539985.1 5296 R 311402 CDS YP_002539986.1 222080123 7365137 6341..7270 1 NC_011982.1 hypothetical protein 7270 7365137 Avi_8005 Agrobacterium vitis S4 hypothetical protein YP_002539986.1 6341 D 311402 CDS YP_002539987.1 222080124 7365138 complement(7357..8493) 1 NC_011982.1 integrase protein 8493 7365138 Avi_8006 Agrobacterium vitis S4 integrase protein YP_002539987.1 7357 R 311402 CDS YP_002539988.1 222080125 7365139 9562..10257 1 NC_011982.1 hypothetical protein 10257 7365139 Avi_8008 Agrobacterium vitis S4 hypothetical protein YP_002539988.1 9562 D 311402 CDS YP_002539989.1 222080126 7365140 complement(10347..10919) 1 NC_011982.1 hypothetical protein 10919 7365140 Avi_8010 Agrobacterium vitis S4 hypothetical protein YP_002539989.1 10347 R 311402 CDS YP_002539990.1 222080127 7365141 11011..11868 1 NC_011982.1 transposase protein 11868 7365141 Avi_8011 Agrobacterium vitis S4 transposase protein YP_002539990.1 11011 D 311402 CDS YP_002539991.1 222080128 7365142 11908..12624 1 NC_011982.1 transposase protein 12624 7365142 Avi_8012 Agrobacterium vitis S4 transposase protein YP_002539991.1 11908 D 311402 CDS YP_002539992.1 222080129 7365143 12803..13006 1 NC_011982.1 hypothetical protein 13006 7365143 Avi_8013 Agrobacterium vitis S4 hypothetical protein YP_002539992.1 12803 D 311402 CDS YP_002539993.1 222080130 7365144 13035..13523 1 NC_011982.1 hypothetical protein 13523 7365144 Avi_8014 Agrobacterium vitis S4 hypothetical protein YP_002539993.1 13035 D 311402 CDS YP_002539994.1 222080131 7365145 13818..14705 1 NC_011982.1 Ku protein 14705 7365145 Avi_8015 Agrobacterium vitis S4 Ku protein YP_002539994.1 13818 D 311402 CDS YP_002539995.1 222080132 7365146 14709..15530 1 NC_011982.1 Ku protein 15530 7365146 Avi_8016 Agrobacterium vitis S4 Ku protein YP_002539995.1 14709 D 311402 CDS YP_002539996.1 222080133 7365147 complement(15594..18275) 1 NC_011982.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 18275 ligD 7365147 ligD Agrobacterium vitis S4 ATP-dependent DNA ligase YP_002539996.1 15594 R 311402 CDS YP_002539997.1 222080134 7365148 complement(18618..19502) 1 NC_011982.1 transposase 19502 7365148 Avi_8018 Agrobacterium vitis S4 transposase YP_002539997.1 18618 R 311402 CDS YP_002539998.1 222080135 7365149 19976..20953 1 NC_011982.1 dehydrogenase/flavin-dependent oxidoreductase protein 20953 7365149 Avi_8019 Agrobacterium vitis S4 dehydrogenase/flavin-dependent oxidoreductase protein YP_002539998.1 19976 D 311402 CDS YP_002539999.1 222080136 7365150 21013..22674 1 NC_011982.1 trehalose synthase 22674 7365150 Avi_8020 Agrobacterium vitis S4 trehalose synthase YP_002539999.1 21013 D 311402 CDS YP_002540000.1 222080137 7365151 complement(23158..23997) 1 NC_011982.1 hypothetical protein 23997 7365151 Avi_8022 Agrobacterium vitis S4 hypothetical protein YP_002540000.1 23158 R 311402 CDS YP_002540001.1 222080138 7365153 24955..26739 1 NC_011982.1 sensory methylation accepting chemotaxis protein 26739 7365153 Avi_8025 Agrobacterium vitis S4 sensory methylation accepting chemotaxis protein YP_002540001.1 24955 D 311402 CDS YP_002540002.1 222080139 7365154 complement(27093..27371) 1 NC_011982.1 HNS-type DNA binding protein 27371 7365154 Avi_8027 Agrobacterium vitis S4 HNS-type DNA binding protein YP_002540002.1 27093 R 311402 CDS YP_002540003.1 222080140 7365155 28128..28448 1 NC_011982.1 transcriptional regulator ArsR family 28448 nolR 7365155 nolR Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002540003.1 28128 D 311402 CDS YP_002540004.1 222080141 7365158 29340..30140 1 NC_011982.1 potential exonuclease 30140 7365158 Avi_8032 Agrobacterium vitis S4 potential exonuclease YP_002540004.1 29340 D 311402 CDS YP_002540005.1 222080142 7365160 complement(30726..31265) 1 NC_011982.1 transposase 31265 tnp 7365160 tnp Agrobacterium vitis S4 transposase YP_002540005.1 30726 R 311402 CDS YP_002540006.1 222080143 7365163 complement(32520..33272) 1 NC_011982.1 AraC family transcriptional regulator 33272 7365163 Avi_8042 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002540006.1 32520 R 311402 CDS YP_002540007.1 222080144 7365164 33343..34059 1 NC_011982.1 transposase 34059 7365164 Avi_8044 Agrobacterium vitis S4 transposase YP_002540007.1 33343 D 311402 CDS YP_002540008.1 222080145 7365165 complement(34845..35393) 1 NC_011982.1 Ti-type conjugative transfer system protein TraG 35393 traG 7365165 traG Agrobacterium vitis S4 Ti-type conjugative transfer system protein TraG YP_002540008.1 34845 R 311402 CDS YP_002540009.1 222080146 7365166 complement(35380..35595) 1 NC_011982.1 conjugal transfer protein Dtr system 35595 traD 7365166 traD Agrobacterium vitis S4 conjugal transfer protein Dtr system YP_002540009.1 35380 R 311402 CDS YP_002540010.1 222080147 7365167 complement(35600..35896) 1 NC_011982.1 conjugal transfer protein TraC 35896 traC 7365167 traC Agrobacterium vitis S4 conjugal transfer protein TraC YP_002540010.1 35600 R 311402 CDS YP_002540011.1 222080148 7365171 complement(40885..41259) 1 NC_011982.1 transposase 41259 7365171 Avi_8059 Agrobacterium vitis S4 transposase YP_002540011.1 40885 R 311402 CDS YP_002540012.1 222080149 7365175 complement(44012..44956) 1 NC_011982.1 hypothetical protein 44956 7365175 Avi_8066 Agrobacterium vitis S4 hypothetical protein YP_002540012.1 44012 R 311402 CDS YP_002540013.1 222080150 7365176 complement(44953..45393) 1 NC_011982.1 transcriptional regulator 45393 exsI 7365176 exsI Agrobacterium vitis S4 transcriptional regulator YP_002540013.1 44953 R 311402 CDS YP_002540014.1 222080151 7365177 complement(45390..47018) 1 NC_011982.1 GGDEF family protein 47018 7365177 Avi_8068 Agrobacterium vitis S4 GGDEF family protein YP_002540014.1 45390 R 311402 CDS YP_002540015.1 222080152 7365178 47843..48883 1 NC_011982.1 transposase 48883 7365178 Avi_8070 Agrobacterium vitis S4 transposase YP_002540015.1 47843 D 311402 CDS YP_002540016.1 222080153 7365180 complement(49695..49979) 1 NC_011982.1 transposase 49979 7365180 Avi_8072 Agrobacterium vitis S4 transposase YP_002540016.1 49695 R 311402 CDS YP_002540017.1 222080154 7365181 complement(49976..51265) 1 NC_011982.1 hypothetical protein 51265 7365181 Avi_8073 Agrobacterium vitis S4 hypothetical protein YP_002540017.1 49976 R 311402 CDS YP_002540018.1 222080155 7365182 complement(51395..51682) 1 NC_011982.1 transcriptional regulator 51682 7365182 Avi_8074 Agrobacterium vitis S4 transcriptional regulator YP_002540018.1 51395 R 311402 CDS YP_002540019.1 222080156 7365183 complement(51718..52392) 1 NC_011982.1 hypothetical protein 52392 7365183 Avi_8075 Agrobacterium vitis S4 hypothetical protein YP_002540019.1 51718 R 311402 CDS YP_002540020.1 222080157 7365184 52672..53013 1 NC_011982.1 hypothetical protein 53013 7365184 Avi_8076 Agrobacterium vitis S4 hypothetical protein YP_002540020.1 52672 D 311402 CDS YP_002540021.1 222080158 7365185 52985..54193 1 NC_011982.1 hypothetical protein 54193 7365185 Avi_8077 Agrobacterium vitis S4 hypothetical protein YP_002540021.1 52985 D 311402 CDS YP_002540022.1 222080159 7365186 54336..54938 1 NC_011982.1 hypothetical protein 54938 7365186 Avi_8078 Agrobacterium vitis S4 hypothetical protein YP_002540022.1 54336 D 311402 CDS YP_002540023.1 222080160 7365187 55167..56579 1 NC_011982.1 helicase SNF2 family 56579 7365187 Avi_8079 Agrobacterium vitis S4 helicase SNF2 family YP_002540023.1 55167 D 311402 CDS YP_002540024.1 222080161 7365188 56800..57684 1 NC_011982.1 transposase 57684 7365188 Avi_8080 Agrobacterium vitis S4 transposase YP_002540024.1 56800 D 311402 CDS YP_002540025.1 222080162 7365189 57688..61323 1 NC_011982.1 helicase 61323 7365189 Avi_8083 Agrobacterium vitis S4 helicase YP_002540025.1 57688 D 311402 CDS YP_002540026.1 222080163 7365190 complement(61659..64496) 1 NC_011982.1 hypothetical protein 64496 7365190 Avi_8085 Agrobacterium vitis S4 hypothetical protein YP_002540026.1 61659 R 311402 CDS YP_002540027.1 222080164 7365191 complement(64493..65224) 1 NC_011982.1 rhizobiocin/RTX toxin 65224 rzcA 7365191 rzcA Agrobacterium vitis S4 rhizobiocin/RTX toxin YP_002540027.1 64493 R 311402 CDS YP_002540028.1 222080165 7365192 complement(65582..66406) 1 NC_011982.1 PEP phosphonomutase 66406 7365192 Avi_8089 Agrobacterium vitis S4 PEP phosphonomutase YP_002540028.1 65582 R 311402 CDS YP_002540029.1 222080166 7365194 68595..69068 1 NC_011982.1 hypothetical protein 69068 7365194 Avi_8094 Agrobacterium vitis S4 hypothetical protein YP_002540029.1 68595 D 311402 CDS YP_002540030.1 222080167 7365195 69065..69952 1 NC_011982.1 hypothetical protein 69952 7365195 Avi_8095 Agrobacterium vitis S4 hypothetical protein YP_002540030.1 69065 D 311402 CDS YP_002540031.1 222080168 7365196 69949..70353 1 NC_011982.1 hypothetical protein 70353 7365196 Avi_8097 Agrobacterium vitis S4 hypothetical protein YP_002540031.1 69949 D 311402 CDS YP_002540032.1 222080169 7365197 70699..71298 1 NC_011982.1 hypothetical protein 71298 7365197 Avi_8098 Agrobacterium vitis S4 hypothetical protein YP_002540032.1 70699 D 311402 CDS YP_002540033.1 222080170 7365198 71614..72540 1 NC_011982.1 antirestriction protein 72540 ardC 7365198 ardC Agrobacterium vitis S4 antirestriction protein YP_002540033.1 71614 D 311402 CDS YP_002540034.1 222080171 7365199 complement(73428..73613) 1 NC_011982.1 transposase 73613 7365199 Avi_8103 Agrobacterium vitis S4 transposase YP_002540034.1 73428 R 311402 CDS YP_002540035.1 222080172 7365200 complement(73595..74479) 1 NC_011982.1 transposase 74479 7365200 Avi_8104 Agrobacterium vitis S4 transposase YP_002540035.1 73595 R 311402 CDS YP_002540036.1 222080173 7365201 complement(74734..75630) 1 NC_011982.1 IS1111A/IS1328/IS1533 family transposase 75630 7365201 Avi_8105 Agrobacterium vitis S4 IS1111A/IS1328/IS1533 family transposase YP_002540036.1 74734 R 311402 CDS YP_002540037.1 222080174 7365203 complement(77849..78151) 1 NC_011982.1 hypothetical protein 78151 7365203 Avi_8111 Agrobacterium vitis S4 hypothetical protein YP_002540037.1 77849 R 311402 CDS YP_002540038.1 222080175 7365204 78540..79766 1 NC_011982.1 integrase/recombinase 79766 7365204 Avi_8114 Agrobacterium vitis S4 integrase/recombinase YP_002540038.1 78540 D 311402 CDS YP_002540039.1 222080176 7365205 79742..80680 1 NC_011982.1 site-specific tyrosine recombinase XerC 80680 xerC 7365205 xerC Agrobacterium vitis S4 site-specific tyrosine recombinase XerC YP_002540039.1 79742 D 311402 CDS YP_002540040.1 222080177 7365206 80677..81684 1 NC_011982.1 integrase/recombinase 81684 7365206 Avi_8116 Agrobacterium vitis S4 integrase/recombinase YP_002540040.1 80677 D 311402 CDS YP_002540041.1 222080178 7365207 82014..82316 1 NC_011982.1 hypothetical protein 82316 7365207 Avi_8119 Agrobacterium vitis S4 hypothetical protein YP_002540041.1 82014 D 311402 CDS YP_002540042.1 222080179 7365208 82457..82654 1 NC_011982.1 hypothetical protein 82654 7365208 Avi_8120 Agrobacterium vitis S4 hypothetical protein YP_002540042.1 82457 D 311402 CDS YP_002540043.1 222080180 7365209 82794..83042 1 NC_011982.1 hypothetical protein 83042 7365209 Avi_8121 Agrobacterium vitis S4 hypothetical protein YP_002540043.1 82794 D 311402 CDS YP_002540044.1 222080181 7365210 complement(83145..83423) 1 NC_011982.1 HNS-type DNA binding protein 83423 7365210 Avi_8123 Agrobacterium vitis S4 HNS-type DNA binding protein YP_002540044.1 83145 R 311402 CDS YP_002540045.1 222080182 7365211 complement(83507..83815) 1 NC_011982.1 hypothetical protein 83815 7365211 Avi_8126 Agrobacterium vitis S4 hypothetical protein YP_002540045.1 83507 R 311402 CDS YP_002540046.1 222080183 7365212 complement(83870..84310) 1 NC_011982.1 nuclease 84310 yci 7365212 yci Agrobacterium vitis S4 nuclease YP_002540046.1 83870 R 311402 CDS YP_002540047.1 222080184 7365213 complement(84307..86271) 1 NC_011982.1 VirD4 family; conjugal transfer coupling protein TraG 86271 traG 7365213 traG Agrobacterium vitis S4 conjugal transfer coupling protein TraG YP_002540047.1 84307 R 311402 CDS YP_002540048.1 222080185 7365214 complement(86258..86473) 1 NC_011982.1 conjugal transfer protein Dtr system 86473 traD 7365214 traD Agrobacterium vitis S4 conjugal transfer protein Dtr system YP_002540048.1 86258 R 311402 CDS YP_002540049.1 222080186 7365287 complement(86478..86774) 1 NC_011982.1 conjugal transfer protein TraC 86774 traC 7365287 traC Agrobacterium vitis S4 conjugal transfer protein TraC YP_002540049.1 86478 R 311402 CDS YP_002540050.1 222080187 7365050 87030..90332 1 NC_011982.1 conjugal transfer system TraA; oriT nicking enzyme; Dtr system oriT relaxase 90332 traA 7365050 traA Agrobacterium vitis S4 Dtr system oriT relaxase YP_002540050.1 87030 D 311402 CDS YP_002540051.1 222080188 7365051 90329..90859 1 NC_011982.1 conjugal transfer pilin processing protease TraF 90859 traF 7365051 traF Agrobacterium vitis S4 conjugal transfer pilin processing protease TraF YP_002540051.1 90329 D 311402 CDS YP_002540052.1 222080189 7365053 92094..92723 1 NC_011982.1 conjugal transfer protein TraH 92723 traH 7365053 traH Agrobacterium vitis S4 conjugal transfer protein TraH YP_002540052.1 92094 D 311402 CDS YP_002540053.1 222080190 7365054 92879..93325 1 NC_011982.1 hypothetical protein 93325 7365054 Avi_8136 Agrobacterium vitis S4 hypothetical protein YP_002540053.1 92879 D 311402 CDS YP_002540054.1 222080191 7365055 93351..93785 1 NC_011982.1 hypothetical protein 93785 7365055 Avi_8137 Agrobacterium vitis S4 hypothetical protein YP_002540054.1 93351 D 311402 CDS YP_002540055.1 222080192 7365056 94123..94431 1 NC_011982.1 transcriptional repressor 94431 traM 7365056 traM Agrobacterium vitis S4 transcriptional repressor YP_002540055.1 94123 D 311402 CDS YP_002540056.1 222080193 7365057 complement(94839..95522) 1 NC_011982.1 quorum-sensing transcriptional regulator; transcriptional regulator TraR 95522 traR 7365057 traR Agrobacterium vitis S4 transcriptional regulator TraR YP_002540056.1 94839 R 311402 CDS YP_002540057.1 222080194 7365058 complement(95892..96776) 1 NC_011982.1 alanine racemase 96776 alr 7365058 alr Agrobacterium vitis S4 alanine racemase YP_002540057.1 95892 R 311402 CDS YP_002540058.1 222080195 7365059 96911..97372 1 NC_011982.1 transcriptional regulator 97372 7365059 Avi_8143 Agrobacterium vitis S4 transcriptional regulator YP_002540058.1 96911 D 311402 CDS YP_002540059.1 222080196 7365060 complement(97789..98604) 1 NC_011982.1 transcriptional regulator IclR family 98604 7365060 Avi_8145 Agrobacterium vitis S4 transcriptional regulator IclR family YP_002540059.1 97789 R 311402 CDS YP_002540060.1 222080197 7365061 98782..99897 1 NC_011982.1 spermidine/putrescine binding protein of ABC transporter 99897 7365061 Avi_8146 Agrobacterium vitis S4 spermidine/putrescine binding protein of ABC transporter YP_002540060.1 98782 D 311402 CDS YP_002540061.1 222080198 7365062 100330..101070 1 NC_011982.1 ABC transporter ATPase 101070 7365062 Avi_8147 Agrobacterium vitis S4 ABC transporter ATPase YP_002540061.1 100330 D 311402 CDS YP_002540062.1 222080199 7365063 101072..101953 1 NC_011982.1 ABC transporter permease 101953 potB 7365063 potB Agrobacterium vitis S4 ABC transporter permease YP_002540062.1 101072 D 311402 CDS YP_002540063.1 222080200 7365064 101950..102750 1 NC_011982.1 ABC transporter 102750 7365064 Avi_8149 Agrobacterium vitis S4 ABC transporter YP_002540063.1 101950 D 311402 CDS YP_002540064.1 222080201 7365065 102871..104217 1 NC_011982.1 hypothetical protein 104217 bioA 7365065 bioA Agrobacterium vitis S4 hypothetical protein YP_002540064.1 102871 D 311402 CDS YP_002540065.1 222080202 7365066 104805..105662 1 NC_011982.1 ABC transporter permease 105662 potB 7365066 potB Agrobacterium vitis S4 ABC transporter permease YP_002540065.1 104805 D 311402 CDS YP_002540066.1 222080203 7365067 105659..106453 1 NC_011982.1 ABC transporter 106453 7365067 Avi_8156 Agrobacterium vitis S4 ABC transporter YP_002540066.1 105659 D 311402 CDS YP_002540067.1 222080204 7365068 106492..107529 1 NC_011982.1 ABC transporter substrate binding protein (putrescine) 107529 potF 7365068 potF Agrobacterium vitis S4 ABC transporter substrate binding protein (putrescine) YP_002540067.1 106492 D 311402 CDS YP_002540068.1 222080205 7365069 107614..108747 1 NC_011982.1 ABC transporter nucleotide binding/ATPase protein (putrescine) 108747 potG 7365069 potG Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (putrescine) YP_002540068.1 107614 D 311402 CDS YP_002540069.1 222080206 7365070 108866..110350 1 NC_011982.1 NAD-dependent succinate aldehyde dehydrogenase 110350 attK 7365070 attK Agrobacterium vitis S4 NAD-dependent succinate aldehyde dehydrogenase YP_002540069.1 108866 D 311402 CDS YP_002540070.1 222080207 7365071 110875..112443 1 NC_011982.1 ABC transporter substrate binding protein (peptide) 112443 dfpA 7365071 dfpA Agrobacterium vitis S4 ABC transporter substrate binding protein (peptide) YP_002540070.1 110875 D 311402 CDS YP_002540071.1 222080208 7365072 complement(112588..113337) 1 NC_011982.1 transcriptional regulator IclR family 113337 7365072 Avi_8163 Agrobacterium vitis S4 transcriptional regulator IclR family YP_002540071.1 112588 R 311402 CDS YP_002540072.1 222080209 7365073 complement(113659..115041) 1 NC_011982.1 oxidoreductase 115041 7365073 Avi_8165 Agrobacterium vitis S4 oxidoreductase YP_002540072.1 113659 R 311402 CDS YP_002540073.1 222080210 7365074 complement(115013..115870) 1 NC_011982.1 hypothetical protein 115870 7365074 Avi_8166 Agrobacterium vitis S4 hypothetical protein YP_002540073.1 115013 R 311402 CDS YP_002540074.1 222080211 7365075 complement(115983..117338) 1 NC_011982.1 hypothetical protein 117338 7365075 Avi_8168 Agrobacterium vitis S4 hypothetical protein YP_002540074.1 115983 R 311402 CDS YP_002540075.1 222080212 7365076 complement(117493..118275) 1 NC_011982.1 ABC transporter permease 118275 7365076 Avi_8169 Agrobacterium vitis S4 ABC transporter permease YP_002540075.1 117493 R 311402 CDS YP_002540076.1 222080213 7365077 complement(118272..119141) 1 NC_011982.1 ABC transporter permease 119141 potB 7365077 potB Agrobacterium vitis S4 ABC transporter permease YP_002540076.1 118272 R 311402 CDS YP_002540077.1 222080214 7365078 complement(119141..120235) 1 NC_011982.1 ABC transporter nucleotide binding/ATPase protein (iron) 120235 afuC 7365078 afuC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (iron) YP_002540077.1 119141 R 311402 CDS YP_002540078.1 222080215 7365079 complement(120250..121284) 1 NC_011982.1 ABC transporter substrate binding protein (spermidine/putrescine) 121284 7365079 Avi_8173 Agrobacterium vitis S4 ABC transporter substrate binding protein (spermidine/putrescine) YP_002540078.1 120250 R 311402 CDS YP_002540079.1 222080216 7365080 complement(121315..123072) 1 NC_011982.1 hydantoin utilization protein 123072 hyuB 7365080 hyuB Agrobacterium vitis S4 hydantoin utilization protein YP_002540079.1 121315 R 311402 CDS YP_002540080.1 222080217 7365081 complement(123085..125130) 1 NC_011982.1 hydantoin utilization protein 125130 hyuA 7365081 hyuA Agrobacterium vitis S4 hydantoin utilization protein YP_002540080.1 123085 R 311402 CDS YP_002540081.1 222080218 7365082 125585..126352 1 NC_011982.1 Transcriptional regulator 126352 7365082 Avi_8178 Agrobacterium vitis S4 Transcriptional regulator YP_002540081.1 125585 D 311402 CDS YP_002540082.1 222080219 7365083 126581..127522 1 NC_011982.1 peptide ABC transporter permease 127522 7365083 Avi_8180 Agrobacterium vitis S4 peptide ABC transporter permease YP_002540082.1 126581 D 311402 CDS YP_002540083.1 222080220 7365084 127519..128400 1 NC_011982.1 ABC transporter permease 128400 7365084 Avi_8181 Agrobacterium vitis S4 ABC transporter permease YP_002540083.1 127519 D 311402 CDS YP_002540084.1 222080221 7365085 128400..130190 1 NC_011982.1 ABC transporter ATPase 130190 7365085 Avi_8183 Agrobacterium vitis S4 ABC transporter ATPase YP_002540084.1 128400 D 311402 CDS YP_002540085.1 222080222 7365086 130199..131530 1 NC_011982.1 MmgE/PrpD family protein 131530 7365086 Avi_8184 Agrobacterium vitis S4 MmgE/PrpD family protein YP_002540085.1 130199 D 311402 CDS YP_002540086.1 222080223 7365087 131825..132874 1 NC_011982.1 alcohol dehydrogenase 132874 adhP 7365087 adhP Agrobacterium vitis S4 alcohol dehydrogenase YP_002540086.1 131825 D 311402 CDS YP_002540087.1 222080224 7365088 132911..134464 1 NC_011982.1 aldehyde dehydrogenase 134464 7365088 Avi_8188 Agrobacterium vitis S4 aldehyde dehydrogenase YP_002540087.1 132911 D 311402 CDS YP_002540088.1 222080225 7365091 137201..137929 1 NC_011982.1 T-DNA oncoprotein 137929 7365091 Avi_8194 Agrobacterium vitis S4 T-DNA oncoprotein YP_002540088.1 137201 D 311402 CDS YP_002540089.1 222080226 7365092 complement(138220..139356) 1 NC_011982.1 D-nopaline dehydrogenase 139356 nos 7365092 nos Agrobacterium vitis S4 D-nopaline dehydrogenase YP_002540089.1 138220 R 311402 CDS YP_002540090.1 222080227 7365094 141732..142943 1 NC_011982.1 replication protein A 142943 repA 7365094 repA Agrobacterium vitis S4 replication protein A YP_002540090.1 141732 D 311402 CDS YP_002540091.1 222080228 7365095 142940..143977 1 NC_011982.1 replication protein B 143977 repB 7365095 repB Agrobacterium vitis S4 replication protein B YP_002540091.1 142940 D 311402 CDS YP_002540092.1 222080229 7365096 144222..145484 1 NC_011982.1 replication protein C 145484 repC 7365096 repC Agrobacterium vitis S4 replication protein C YP_002540092.1 144222 D 311402 CDS YP_002540093.1 222080230 7365097 complement(145481..146581) 1 NC_011982.1 transposase 146581 7365097 Avi_8202 Agrobacterium vitis S4 transposase YP_002540093.1 145481 R 311402 CDS YP_002540094.1 222080231 7365100 complement(148205..150673) 1 NC_011982.1 virA/G regulated protein 150673 virD5 7365100 virD5 Agrobacterium vitis S4 virA/G regulated protein YP_002540094.1 148205 R 311402 CDS YP_002540095.1 222080232 7365101 complement(150781..152772) 1 NC_011982.1 coupling protein TraG/VirD4 family; type IV secretion system protein VirD4 152772 virD4 7365101 virD4 Agrobacterium vitis S4 type IV secretion system protein VirD4 YP_002540095.1 150781 R 311402 CDS YP_002540096.1 222080233 7365102 complement(152830..155502) 1 NC_011982.1 virA/G regulated protein 155502 virD3 7365102 virD3 Agrobacterium vitis S4 virA/G regulated protein YP_002540096.1 152830 R 311402 CDS YP_002540097.1 222080234 7365103 complement(155516..156727) 1 NC_011982.1 type IV secretion system T-DNA border endonuclease VirD2 156727 virD2 7365103 virD2 Agrobacterium vitis S4 type IV secretion system T-DNA border endonuclease VirD2 YP_002540097.1 155516 R 311402 CDS YP_002540098.1 222080235 7365104 complement(156754..157200) 1 NC_011982.1 type IV secretion system T-DNA border endonuclease VirD1 157200 virD1 7365104 virD1 Agrobacterium vitis S4 type IV secretion system T-DNA border endonuclease VirD1 YP_002540098.1 156754 R 311402 CDS YP_002540099.1 222080236 7365105 157457..158152 1 NC_011982.1 putative crown gall tumor protein VirC1 158152 virC1 7365105 virC1 Agrobacterium vitis S4 putative crown gall tumor protein VirC1 YP_002540099.1 157457 D 311402 CDS YP_002540100.1 222080237 7365106 158149..158763 1 NC_011982.1 putative crown gall tumor protein VirC2 158763 virC2 7365106 virC2 Agrobacterium vitis S4 putative crown gall tumor protein VirC2 YP_002540100.1 158149 D 311402 CDS YP_002540101.1 222080238 7365107 complement(158885..159610) 1 NC_011982.1 two-component response regulator VirG 159610 virG 7365107 virG Agrobacterium vitis S4 two-component response regulator VirG YP_002540101.1 158885 R 311402 CDS YP_002540102.1 222080239 7365108 complement(159841..160875) 1 NC_011982.1 ATPase; type IV secretion system protein VirB11 160875 virB11 7365108 virB11 Agrobacterium vitis S4 type IV secretion system protein VirB11 YP_002540102.1 159841 R 311402 CDS YP_002540103.1 222080240 7365109 complement(160909..162030) 1 NC_011982.1 type IV secretion system protein VirB10 162030 virB10 7365109 virB10 Agrobacterium vitis S4 type IV secretion system protein VirB10 YP_002540103.1 160909 R 311402 CDS YP_002540104.1 222080241 7365110 complement(162030..162908) 1 NC_011982.1 type IV secretion system protein VirB9 162908 virB9 7365110 virB9 Agrobacterium vitis S4 type IV secretion system protein VirB9 YP_002540104.1 162030 R 311402 CDS YP_002540105.1 222080242 7365111 complement(162905..163618) 1 NC_011982.1 type IV secretion system protein VirB8 163618 virB8 7365111 virB8 Agrobacterium vitis S4 type IV secretion system protein VirB8 YP_002540105.1 162905 R 311402 CDS YP_002540106.1 222080322 7365112 complement(163605..163772) 1 NC_011982.1 type IV secretion system lipoprotein VirB7 163772 virB7 7365112 virB7 Agrobacterium vitis S4 type IV secretion system lipoprotein VirB7 YP_002540106.1 163605 R 311402 CDS YP_002540107.1 222080243 7365284 complement(163800..164687) 1 NC_011982.1 type IV secretion system protein VirB6 164687 virB6 7365284 virB6 Agrobacterium vitis S4 type IV secretion system protein VirB6 YP_002540107.1 163800 R 311402 CDS YP_002540108.1 222080244 7365113 complement(164747..165415) 1 NC_011982.1 type IV secretion system protein VirB5 165415 virB5 7365113 virB5 Agrobacterium vitis S4 type IV secretion system protein VirB5 YP_002540108.1 164747 R 311402 CDS YP_002540109.1 222080245 7365114 complement(165443..167812) 1 NC_011982.1 type IV secretion system protein VirB4 167812 virB4 7365114 virB4 Agrobacterium vitis S4 type IV secretion system protein VirB4 YP_002540109.1 165443 R 311402 CDS YP_002540110.1 222080246 7365115 complement(167812..168138) 1 NC_011982.1 type IV secretion system protein VirB3 168138 virB3 7365115 virB3 Agrobacterium vitis S4 type IV secretion system protein VirB3 YP_002540110.1 167812 R 311402 CDS YP_002540111.1 222080247 7365116 complement(168135..168500) 1 NC_011982.1 type IV secretion system pilin subunit VirB2 168500 virB2 7365116 virB2 Agrobacterium vitis S4 type IV secretion system pilin subunit VirB2 YP_002540111.1 168135 R 311402 CDS YP_002540112.1 222080248 7365117 complement(168516..169232) 1 NC_011982.1 type IV secretion system lytic transglycosylase VirB1 169232 virB1 7365117 virB1 Agrobacterium vitis S4 type IV secretion system lytic transglycosylase VirB1 YP_002540112.1 168516 R 311402 CDS YP_002540113.1 222080249 7365119 170524..170877 1 NC_011982.1 transposase 170877 7365119 Avi_8230 Agrobacterium vitis S4 transposase YP_002540113.1 170524 D 311402 CDS YP_002540114.1 222080250 7365120 170939..172600 1 NC_011982.1 transposase 172600 7365120 Avi_8231 Agrobacterium vitis S4 transposase YP_002540114.1 170939 D 311402 CDS YP_002540115.1 222080251 7365122 complement(172907..173212) 1 NC_011982.1 hypothetical protein 173212 7365122 Avi_8233 Agrobacterium vitis S4 hypothetical protein YP_002540115.1 172907 R 311402 CDS YP_002540116.1 222080252 7365124 complement(174077..174439) 1 NC_011982.1 transposase 174439 7365124 Avi_8237 Agrobacterium vitis S4 transposase YP_002540116.1 174077 R 311402 CDS YP_002540117.1 222080253 7365125 complement(174421..174783) 1 NC_011982.1 transposase 174783 7365125 Avi_8238 Agrobacterium vitis S4 transposase YP_002540117.1 174421 R 311402 CDS YP_002540118.1 222080254 7365127 complement(175275..177296) 1 NC_011982.1 virA/G regulated protein 177296 virE3 7365127 virE3 Agrobacterium vitis S4 virA/G regulated protein YP_002540118.1 175275 R 311402 CDS YP_002540119.1 222080255 7365128 complement(177363..179033) 1 NC_011982.1 type IV secretion system single-stranded DNA binding protein VirE2 179033 virE2 7365128 virE2 Agrobacterium vitis S4 type IV secretion system single-stranded DNA binding protein VirE2 YP_002540119.1 177363 R 311402 CDS YP_002540120.1 222080256 7365129 complement(179047..179238) 1 NC_011982.1 in Agrobacterium tumefaciens plasmid Ti this protein binds VirE2; type IV secretion system chaperone VirE1 179238 virE1 7365129 virE1 Agrobacterium vitis S4 type IV secretion system chaperone VirE1 YP_002540120.1 179047 R 311402 CDS YP_002540121.1 222080257 7365132 181933..182286 1 NC_011982.1 transposase 182286 7365132 Avi_8248 Agrobacterium vitis S4 transposase YP_002540121.1 181933 D 311402 CDS YP_002540122.1 222080258 7365215 182348..184009 1 NC_011982.1 transposase 184009 7365215 Avi_8249 Agrobacterium vitis S4 transposase YP_002540122.1 182348 D 311402 CDS YP_002540123.1 222080259 7365216 complement(184278..186821) 1 NC_011982.1 two-component VirA-like sensor kinase 186821 virA 7365216 virA Agrobacterium vitis S4 two-component VirA-like sensor kinase YP_002540123.1 184278 R 311402 CDS YP_002540124.1 222080260 7365217 complement(187013..188221) 1 NC_011982.1 P-450 monooxygenase 188221 virH1 7365217 virH1 Agrobacterium vitis S4 P-450 monooxygenase YP_002540124.1 187013 R 311402 CDS YP_002540125.1 222080261 7365218 188557..189786 1 NC_011982.1 phage integrase family protein 189786 7365218 Avi_8253 Agrobacterium vitis S4 phage integrase family protein YP_002540125.1 188557 D 311402 CDS YP_002540126.1 222080262 7365219 189783..190805 1 NC_011982.1 transposase 190805 tnp 7365219 tnp Agrobacterium vitis S4 transposase YP_002540126.1 189783 D 311402 CDS YP_002540127.1 222080263 7365220 complement(191202..191570) 1 NC_011982.1 transposase 191570 tnp 7365220 tnp Agrobacterium vitis S4 transposase YP_002540127.1 191202 R 311402 CDS YP_002540128.1 222080264 7365221 complement(191686..192522) 1 NC_011982.1 reverse transcriptase-like protein 192522 7365221 Avi_8256 Agrobacterium vitis S4 reverse transcriptase-like protein YP_002540128.1 191686 R 311402 CDS YP_002540129.1 222080265 7365222 complement(192645..192974) 1 NC_011982.1 integrase/recombinase 192974 7365222 Avi_8257 Agrobacterium vitis S4 integrase/recombinase YP_002540129.1 192645 R 311402 CDS YP_002540130.1 222080266 7365223 complement(192978..193862) 1 NC_011982.1 transposase 193862 7365223 Avi_8258 Agrobacterium vitis S4 transposase YP_002540130.1 192978 R 311402 CDS YP_002540131.1 222080267 7365224 complement(194083..194823) 1 NC_011982.1 integrase/recombinase 194823 7365224 Avi_8259 Agrobacterium vitis S4 integrase/recombinase YP_002540131.1 194083 R 311402 CDS YP_002540132.1 222080268 7365225 complement(194813..195790) 1 NC_011982.1 integrase/recombinase 195790 7365225 Avi_8260 Agrobacterium vitis S4 integrase/recombinase YP_002540132.1 194813 R 311402 CDS YP_002540133.1 222080269 7365226 complement(195790..196767) 1 NC_011982.1 integrase/recombinase 196767 7365226 Avi_8262 Agrobacterium vitis S4 integrase/recombinase YP_002540133.1 195790 R 311402 CDS YP_002540134.1 222080270 7365227 complement(197080..197853) 1 NC_011982.1 18S rRNA intron 1 protein 197853 7365227 Avi_8264 Agrobacterium vitis S4 18S rRNA intron 1 protein YP_002540134.1 197080 R 311402 CDS YP_002540135.1 222080271 7365228 197920..198693 1 NC_011982.1 hypothetical protein 198693 7365228 Avi_8265 Agrobacterium vitis S4 hypothetical protein YP_002540135.1 197920 D 311402 CDS YP_002540136.1 222080272 7365229 complement(198912..199241) 1 NC_011982.1 hypothetical protein 199241 7365229 Avi_8266 Agrobacterium vitis S4 hypothetical protein YP_002540136.1 198912 R 311402 CDS YP_002540137.1 222080273 7365230 200377..200997 1 NC_011982.1 protein 6b 200997 7365230 Avi_8269 Agrobacterium vitis S4 protein 6b YP_002540137.1 200377 D 311402 CDS YP_002540138.1 222080274 7365231 complement(201537..202619) 1 NC_011982.1 D-vitopine dehydrogenase 202619 7365231 Avi_8271 Agrobacterium vitis S4 D-vitopine dehydrogenase YP_002540138.1 201537 R 311402 CDS YP_002540139.1 222080275 7365232 203032..203541 1 NC_011982.1 insertion sequence ATP-binding protein 203541 7365232 Avi_8272 Agrobacterium vitis S4 insertion sequence ATP-binding protein YP_002540139.1 203032 D 311402 CDS YP_002540140.1 222080276 7365233 203849..204409 1 NC_011982.1 transposase 204409 tnp 7365233 tnp Agrobacterium vitis S4 transposase YP_002540140.1 203849 D 311402 CDS YP_002540141.1 222080277 7365234 205056..206207 1 NC_011982.1 ATP-dependent DNA ligase 206207 7365234 Avi_8275 Agrobacterium vitis S4 ATP-dependent DNA ligase YP_002540141.1 205056 D 311402 CDS YP_002540142.1 222080278 7365235 complement(206271..206633) 1 NC_011982.1 hypothetical protein 206633 7365235 Avi_8276 Agrobacterium vitis S4 hypothetical protein YP_002540142.1 206271 R 311402 CDS YP_002540143.1 222080279 7365237 207335..207958 1 NC_011982.1 virP 207958 7365237 Avi_8278 Agrobacterium vitis S4 virP YP_002540143.1 207335 D 311402 CDS YP_002540144.1 222080280 7365238 complement(208159..209580) 1 NC_011982.1 transposase 209580 tnp 7365238 tnp Agrobacterium vitis S4 transposase YP_002540144.1 208159 R 311402 CDS YP_002540145.1 222080281 7365239 209856..210158 1 NC_011982.1 hypothetical protein 210158 7365239 Avi_8280 Agrobacterium vitis S4 hypothetical protein YP_002540145.1 209856 D 311402 CDS YP_002540146.1 222080282 7365240 complement(210169..211389) 1 NC_011982.1 transposase for insertion sequence element isrm3 211389 7365240 Avi_8282 Agrobacterium vitis S4 transposase for insertion sequence element isrm3 YP_002540146.1 210169 R 311402 CDS YP_002540147.1 222080283 7365244 complement(213627..215015) 1 NC_011982.1 catalyzes the formation of indole-3-acetic acid from indole-3-acetamide; indole acetimide hydrolase 215015 tms2 7365244 tms2 Agrobacterium vitis S4 indole acetimide hydrolase YP_002540147.1 213627 R 311402 CDS YP_002540148.1 222080284 7365245 215346..217517 1 NC_011982.1 tryptophan 2-monooxygenase 217517 tms1 7365245 tms1 Agrobacterium vitis S4 tryptophan 2-monooxygenase YP_002540148.1 215346 D 311402 CDS YP_002540149.1 222080285 7365247 complement(218818..219702) 1 NC_011982.1 transposase 219702 7365247 Avi_8291 Agrobacterium vitis S4 transposase YP_002540149.1 218818 R 311402 CDS YP_002540150.1 222080286 7365248 complement(219847..220458) 1 NC_011982.1 IS21 family transposase 220458 istA 7365248 istA Agrobacterium vitis S4 IS21 family transposase YP_002540150.1 219847 R 311402 CDS YP_002540151.1 222080287 7365249 221625..222335 1 NC_011982.1 isopentenyl transferase 222335 ipt 7365249 ipt Agrobacterium vitis S4 isopentenyl transferase YP_002540151.1 221625 D 311402 CDS YP_002540152.1 222080288 7365250 complement(222853..223242) 1 NC_011982.1 D-vitopine dehydrogenase 223242 7365250 Avi_8295 Agrobacterium vitis S4 D-vitopine dehydrogenase YP_002540152.1 222853 R 311402 CDS YP_002540153.1 222080289 7365251 complement(223484..223786) 1 NC_011982.1 D-vitopine dehydrogenase 223786 7365251 Avi_8296 Agrobacterium vitis S4 D-vitopine dehydrogenase YP_002540153.1 223484 R 311402 CDS YP_002540154.1 222080290 7365252 224691..225107 1 NC_011982.1 hypothetical protein 225107 7365252 Avi_8298 Agrobacterium vitis S4 hypothetical protein YP_002540154.1 224691 D 311402 CDS YP_002540155.1 222080291 7365253 complement(225258..225950) 1 NC_011982.1 quorum-sensing transcriptional regulator; transcriptional regulator TraR 225950 traR 7365253 traR Agrobacterium vitis S4 transcriptional regulator TraR YP_002540155.1 225258 R 311402 CDS YP_002540156.1 222080292 7365254 complement(226174..227568) 1 NC_011982.1 D-nopaline dehydrogenase 227568 noxA 7365254 noxA Agrobacterium vitis S4 D-nopaline dehydrogenase YP_002540156.1 226174 R 311402 CDS YP_002540157.1 222080293 7365255 complement(227851..228921) 1 NC_011982.1 D-nopaline dehydrogenase 228921 noxB 7365255 noxB Agrobacterium vitis S4 D-nopaline dehydrogenase YP_002540157.1 227851 R 311402 CDS YP_002540158.1 222080294 7365256 complement(228990..229787) 1 NC_011982.1 ABC transporter 229787 7365256 Avi_8304 Agrobacterium vitis S4 ABC transporter YP_002540158.1 228990 R 311402 CDS YP_002540159.1 222080295 7365257 complement(229784..230641) 1 NC_011982.1 mannopine ABC transporter permease 230641 attA2 7365257 attA2 Agrobacterium vitis S4 mannopine ABC transporter permease YP_002540159.1 229784 R 311402 CDS YP_002540160.1 222080296 7365258 complement(230638..231681) 1 NC_011982.1 ABC transporter ATPase 231681 7365258 Avi_8306 Agrobacterium vitis S4 ABC transporter ATPase YP_002540160.1 230638 R 311402 CDS YP_002540161.1 222080297 7365259 complement(231828..232862) 1 NC_011982.1 ABC transporter substrate-binding protein 232862 7365259 Avi_8307 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002540161.1 231828 R 311402 CDS YP_002540162.1 222080298 7365260 232967..233869 1 NC_011982.1 LysR family transcriptional regulator 233869 nocR 7365260 nocR Agrobacterium vitis S4 LysR family transcriptional regulator YP_002540162.1 232967 D 311402 CDS YP_002540163.1 222080299 7365261 complement(234022..235884) 1 NC_011982.1 ABC transporter ATPase 235884 moaD 7365261 moaD Agrobacterium vitis S4 ABC transporter ATPase YP_002540163.1 234022 R 311402 CDS YP_002540164.1 222080300 7365262 complement(235881..236738) 1 NC_011982.1 peptide ABC transporter permease 236738 dppC 7365262 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002540164.1 235881 R 311402 CDS YP_002540165.1 222080301 7365263 complement(236735..237688) 1 NC_011982.1 peptide ABC transporter permease 237688 7365263 Avi_8312 Agrobacterium vitis S4 peptide ABC transporter permease YP_002540165.1 236735 R 311402 CDS YP_002540166.1 222080302 7365264 complement(237843..239393) 1 NC_011982.1 ABC transporter substrate binding protein (oligopeptide) 239393 7365264 Avi_8313 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002540166.1 237843 R 311402 CDS YP_002540167.1 222080303 7365265 239982..240278 1 NC_011982.1 NAD(FAD)-dependent dehydrogenase 240278 7365265 Avi_8314 Agrobacterium vitis S4 NAD(FAD)-dependent dehydrogenase YP_002540167.1 239982 D 311402 CDS YP_002540168.1 222080304 7365266 240275..241684 1 NC_011982.1 D-nopaline dehydrogenase 241684 noxA 7365266 noxA Agrobacterium vitis S4 D-nopaline dehydrogenase YP_002540168.1 240275 D 311402 CDS YP_002540169.1 222080305 7365267 241677..242030 1 NC_011982.1 Endoribonuclease L-PSP 242030 7365267 Avi_8317 Agrobacterium vitis S4 Endoribonuclease L-PSP YP_002540169.1 241677 D 311402 CDS YP_002540170.1 222080306 7365268 complement(242167..243891) 1 NC_011982.1 hydantoin utilization protein 243891 hyuB 7365268 hyuB Agrobacterium vitis S4 hydantoin utilization protein YP_002540170.1 242167 R 311402 CDS YP_002540171.1 222080307 7365269 complement(243894..245924) 1 NC_011982.1 hydantoin utilization protein 245924 hyuA 7365269 hyuA Agrobacterium vitis S4 hydantoin utilization protein YP_002540171.1 243894 R 311402 CDS YP_002540172.1 222080308 7365270 complement(246018..247160) 1 NC_011982.1 D-nopaline dehydrogenase 247160 noxB 7365270 noxB Agrobacterium vitis S4 D-nopaline dehydrogenase YP_002540172.1 246018 R 311402 CDS YP_002540173.1 222080309 7365271 247266..248156 1 NC_011982.1 LysR family transcriptional regulator 248156 nocR 7365271 nocR Agrobacterium vitis S4 LysR family transcriptional regulator YP_002540173.1 247266 D 311402 CDS YP_002540174.1 222080310 7365272 complement(248211..249524) 1 NC_011982.1 conjugal transfer protein TrbI 249524 trbI 7365272 trbI Agrobacterium vitis S4 conjugal transfer protein TrbI YP_002540174.1 248211 R 311402 CDS YP_002540175.1 222080311 7365273 complement(249537..250013) 1 NC_011982.1 conjugal transfer protein TrbH 250013 trbH 7365273 trbH Agrobacterium vitis S4 conjugal transfer protein TrbH YP_002540175.1 249537 R 311402 CDS YP_002540176.1 222080312 7365274 complement(250013..250867) 1 NC_011982.1 conjugal transfer protein TrbG 250867 trbG 7365274 trbG Agrobacterium vitis S4 conjugal transfer protein TrbG YP_002540176.1 250013 R 311402 CDS YP_002540177.1 222080313 7365275 complement(250884..251546) 1 NC_011982.1 conjugal transfer protein TrbF 251546 trbF 7365275 trbF Agrobacterium vitis S4 conjugal transfer protein TrbF YP_002540177.1 250884 R 311402 CDS YP_002540178.1 222080314 7365276 complement(251561..252589) 1 NC_011982.1 conjugal transfer protein TrbL 252589 trbL 7365276 trbL Agrobacterium vitis S4 conjugal transfer protein TrbL YP_002540178.1 251561 R 311402 CDS YP_002540179.1 222080315 7365277 complement(252739..252966) 1 NC_011982.1 entry-exclusion protein 252966 trbK 7365277 trbK Agrobacterium vitis S4 entry-exclusion protein YP_002540179.1 252739 R 311402 CDS YP_002540180.1 222080316 7365278 complement(252963..253772) 1 NC_011982.1 conjugal transfer protein TrbJ 253772 trbJ 7365278 trbJ Agrobacterium vitis S4 conjugal transfer protein TrbJ YP_002540180.1 252963 R 311402 CDS YP_002540181.1 222080317 7365279 complement(253744..256206) 1 NC_011982.1 type IV secretion system ATPase; VirB4 family; conjugal transfer protein TrbE 256206 trbE 7365279 trbE Agrobacterium vitis S4 conjugal transfer protein TrbE YP_002540181.1 253744 R 311402 CDS YP_002540182.1 222080318 7365280 complement(256217..256516) 1 NC_011982.1 conjugal transfer protein TrbD 256516 trbD 7365280 trbD Agrobacterium vitis S4 conjugal transfer protein TrbD YP_002540182.1 256217 R 311402 CDS YP_002540183.1 222080319 7365281 complement(256509..256913) 1 NC_011982.1 conjugal transfer protein TrbC 256913 trbC 7365281 trbC Agrobacterium vitis S4 conjugal transfer protein TrbC YP_002540183.1 256509 R 311402 CDS YP_002540184.1 222080320 7365282 complement(256903..257874) 1 NC_011982.1 VirB11 family protein; ATPase; conjugal transfer protein TrbB 257874 trbB 7365282 trbB Agrobacterium vitis S4 conjugal transfer protein TrbB YP_002540184.1 256903 R 311402 CDS YP_002540185.1 222080321 7365283 complement(257871..258509) 1 NC_011982.1 putative autoinducer synthesis protein 258509 traI 7365283 traI Agrobacterium vitis S4 putative autoinducer synthesis protein YP_002540185.1 257871 R 311402 CDS YP_002542549.1 222083146 7367867 109..1308 1 NC_011984.1 replication protein A 1308 repA 7367867 repA Agrobacterium vitis S4 replication protein A YP_002542549.1 109 D 311402 CDS YP_002542550.1 222083147 7367754 1391..2368 1 NC_011984.1 replication protein B 2368 repB 7367754 repB Agrobacterium vitis S4 replication protein B YP_002542550.1 1391 D 311402 CDS YP_002542551.1 222083148 7367755 2556..3833 1 NC_011984.1 replication initiation protein RepC 3833 repC 7367755 repC Agrobacterium vitis S4 replication initiation protein RepC YP_002542551.1 2556 D 311402 CDS YP_002542552.1 222083149 7367756 complement(3839..4780) 1 NC_011984.1 DNA invertase 4780 7367756 Avi_9004 Agrobacterium vitis S4 DNA invertase YP_002542552.1 3839 R 311402 CDS YP_002542553.1 222083150 7367757 6113..7192 1 NC_011984.1 two component sensor kinase 7192 exsG 7367757 exsG Agrobacterium vitis S4 two component sensor kinase YP_002542553.1 6113 D 311402 CDS YP_002542554.1 222083151 7367758 complement(7500..8633) 1 NC_011984.1 phage integrase family protein 8633 7367758 Avi_9008 Agrobacterium vitis S4 phage integrase family protein YP_002542554.1 7500 R 311402 CDS YP_002542555.1 222083152 7367759 8746..9711 1 NC_011984.1 hypothetical protein 9711 7367759 Avi_9009 Agrobacterium vitis S4 hypothetical protein YP_002542555.1 8746 D 311402 CDS YP_002542556.1 222083153 7367760 9973..10422 1 NC_011984.1 hypothetical protein 10422 7367760 Avi_9010 Agrobacterium vitis S4 hypothetical protein YP_002542556.1 9973 D 311402 CDS YP_002542557.1 222083154 7367761 complement(10412..10786) 1 NC_011984.1 hypothetical protein 10786 7367761 Avi_9011 Agrobacterium vitis S4 hypothetical protein YP_002542557.1 10412 R 311402 CDS YP_002542558.1 222083155 7367762 complement(10791..11003) 1 NC_011984.1 Translation initiation factor 2 (IF-2; GTPase) 11003 7367762 Avi_9013 Agrobacterium vitis S4 Translation initiation factor 2 (IF-2; GTPase) YP_002542558.1 10791 R 311402 CDS YP_002542559.1 222083156 7367763 11140..11832 1 NC_011984.1 hypothetical protein 11832 7367763 Avi_9014 Agrobacterium vitis S4 hypothetical protein YP_002542559.1 11140 D 311402 CDS YP_002542560.1 222083157 7367766 complement(13900..14274) 1 NC_011984.1 transposase 14274 7367766 Avi_9019 Agrobacterium vitis S4 transposase YP_002542560.1 13900 R 311402 CDS YP_002542561.1 222083158 7367767 complement(14326..15093) 1 NC_011984.1 integrase/recombinase 15093 7367767 Avi_9020 Agrobacterium vitis S4 integrase/recombinase YP_002542561.1 14326 R 311402 CDS YP_002542562.1 222083159 7367770 complement(17042..17995) 1 NC_011984.1 sensory transduction histidine kinase 17995 7367770 Avi_9026 Agrobacterium vitis S4 sensory transduction histidine kinase YP_002542562.1 17042 R 311402 CDS YP_002542563.1 222083160 7367771 complement(18104..18475) 1 NC_011984.1 two component sensor kinase/response regulator hybrid 18475 7367771 Avi_9028 Agrobacterium vitis S4 two component sensor kinase/response regulator hybrid YP_002542563.1 18104 R 311402 CDS YP_002542564.1 222083161 7367772 complement(18707..19432) 1 NC_011984.1 hypothetical protein 19432 7367772 Avi_9030 Agrobacterium vitis S4 hypothetical protein YP_002542564.1 18707 R 311402 CDS YP_002542565.1 222083162 7367774 complement(21766..22341) 1 NC_011984.1 transposase IS4 family protein 22341 7367774 Avi_9035 Agrobacterium vitis S4 transposase IS4 family protein YP_002542565.1 21766 R 311402 CDS YP_002542566.1 222083163 7367775 complement(22412..22726) 1 NC_011984.1 hypothetical protein 22726 7367775 Avi_9036 Agrobacterium vitis S4 hypothetical protein YP_002542566.1 22412 R 311402 CDS YP_002542567.1 222083164 7367776 23098..24783 1 NC_011984.1 hypothetical protein 24783 7367776 Avi_9037 Agrobacterium vitis S4 hypothetical protein YP_002542567.1 23098 D 311402 CDS YP_002542568.1 222083165 7367777 24776..25312 1 NC_011984.1 hypothetical protein 25312 7367777 Avi_9038 Agrobacterium vitis S4 hypothetical protein YP_002542568.1 24776 D 311402 CDS YP_002542569.1 222083166 7367778 complement(25407..26138) 1 NC_011984.1 transposase 26138 7367778 Avi_9039 Agrobacterium vitis S4 transposase YP_002542569.1 25407 R 311402 CDS YP_002542570.1 222083167 7367779 complement(26163..28268) 1 NC_011984.1 two component sensor kinase/response regulator hybrid 28268 cvgS 7367779 cvgS Agrobacterium vitis S4 two component sensor kinase/response regulator hybrid YP_002542570.1 26163 R 311402 CDS YP_002542571.1 222083168 7367780 complement(28639..29355) 1 NC_011984.1 transposase 29355 7367780 Avi_9042 Agrobacterium vitis S4 transposase YP_002542571.1 28639 R 311402 CDS YP_002542572.1 222083169 7367781 complement(29502..29999) 1 NC_011984.1 hypothetical protein 29999 7367781 Avi_9043 Agrobacterium vitis S4 hypothetical protein YP_002542572.1 29502 R 311402 CDS YP_002542573.1 222083170 7367782 complement(30063..30977) 1 NC_011984.1 hypothetical protein 30977 7367782 Avi_9044 Agrobacterium vitis S4 hypothetical protein YP_002542573.1 30063 R 311402 CDS YP_002542574.1 222083171 7367783 complement(30995..31510) 1 NC_011984.1 chemotaxis response regulator 31510 7367783 Avi_9047 Agrobacterium vitis S4 chemotaxis response regulator YP_002542574.1 30995 R 311402 CDS YP_002542575.1 222083172 7367784 31975..32436 1 NC_011984.1 Transcriptional regulator 32436 7367784 Avi_9049 Agrobacterium vitis S4 Transcriptional regulator YP_002542575.1 31975 D 311402 CDS YP_002542576.1 222083173 7367785 32650..32895 1 NC_011984.1 Phage envelope protein 32895 7367785 Avi_9050 Agrobacterium vitis S4 Phage envelope protein YP_002542576.1 32650 D 311402 CDS YP_002542577.1 222083174 7367786 33087..34187 1 NC_011984.1 polyhydroxybutyrate depolymerase 34187 7367786 Avi_9052 Agrobacterium vitis S4 polyhydroxybutyrate depolymerase YP_002542577.1 33087 D 311402 CDS YP_002542578.1 222083175 7367787 34433..35254 1 NC_011984.1 hypothetical protein 35254 7367787 Avi_9053 Agrobacterium vitis S4 hypothetical protein YP_002542578.1 34433 D 311402 CDS YP_002542579.1 222083176 7367788 complement(35626..36870) 1 NC_011984.1 hypothetical protein 36870 7367788 Avi_9054 Agrobacterium vitis S4 hypothetical protein YP_002542579.1 35626 R 311402 CDS YP_002542580.1 222083177 7367789 complement(36863..37198) 1 NC_011984.1 hypothetical protein 37198 7367789 Avi_9055 Agrobacterium vitis S4 hypothetical protein YP_002542580.1 36863 R 311402 CDS YP_002542581.1 222083178 7367790 37429..39786 1 NC_011984.1 hypothetical protein 39786 7367790 Avi_9056 Agrobacterium vitis S4 hypothetical protein YP_002542581.1 37429 D 311402 CDS YP_002542582.1 222083179 7367791 complement(39913..40578) 1 NC_011984.1 hypothetical protein 40578 7367791 Avi_9057 Agrobacterium vitis S4 hypothetical protein YP_002542582.1 39913 R 311402 CDS YP_002542583.1 222083180 7367792 40715..40927 1 NC_011984.1 Translation initiation factor 2 (IF-2; GTPase) 40927 7367792 Avi_9059 Agrobacterium vitis S4 Translation initiation factor 2 (IF-2; GTPase) YP_002542583.1 40715 D 311402 CDS YP_002542584.1 222083181 7367793 40932..41306 1 NC_011984.1 hypothetical protein 41306 7367793 Avi_9061 Agrobacterium vitis S4 hypothetical protein YP_002542584.1 40932 D 311402 CDS YP_002542585.1 222083182 7367795 complement(42169..43698) 1 NC_011984.1 methyl-accepting chemotaxis protein 43698 mcpC 7367795 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002542585.1 42169 R 311402 CDS YP_002542586.1 222083183 7367796 43937..44251 1 NC_011984.1 IS298 transposase OrfA 44251 7367796 Avi_9066 Agrobacterium vitis S4 IS298 transposase OrfA YP_002542586.1 43937 D 311402 CDS YP_002542587.1 222083184 7367797 44322..44717 1 NC_011984.1 transposase 44717 7367797 Avi_9067 Agrobacterium vitis S4 transposase YP_002542587.1 44322 D 311402 CDS YP_002542588.1 222083185 7367798 complement(45005..45976) 1 NC_011984.1 AraC family transcriptional regulator 45976 7367798 Avi_9068 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002542588.1 45005 R 311402 CDS YP_002542589.1 222083186 7367799 complement(46632..47027) 1 NC_011984.1 hypothetical protein 47027 7367799 Avi_9071 Agrobacterium vitis S4 hypothetical protein YP_002542589.1 46632 R 311402 CDS YP_002542590.1 222083187 7367800 complement(47098..47412) 1 NC_011984.1 hypothetical protein 47412 7367800 Avi_9072 Agrobacterium vitis S4 hypothetical protein YP_002542590.1 47098 R 311402 CDS YP_002542591.1 222083188 7367801 47521..48102 1 NC_011984.1 hypothetical protein 48102 7367801 Avi_9073 Agrobacterium vitis S4 hypothetical protein YP_002542591.1 47521 D 311402 CDS YP_002542592.1 222083189 7367802 complement(48487..48798) 1 NC_011984.1 hypothetical protein 48798 7367802 Avi_9074 Agrobacterium vitis S4 hypothetical protein YP_002542592.1 48487 R 311402 CDS YP_002542593.1 222083190 7367803 48919..50595 1 NC_011984.1 hypothetical protein 50595 7367803 Avi_9075 Agrobacterium vitis S4 hypothetical protein YP_002542593.1 48919 D 311402 CDS YP_002542594.1 222083191 7367804 50659..52497 1 NC_011984.1 methyl-accepting chemotaxis protein 52497 mcpC 7367804 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002542594.1 50659 D 311402 CDS YP_002542595.1 222083192 7367805 52940..53986 1 NC_011984.1 methyl-accepting chemotaxis protein 53986 mcpA 7367805 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002542595.1 52940 D 311402 CDS YP_002542596.1 222083193 7367806 54054..54428 1 NC_011984.1 transposase 54428 7367806 Avi_9079 Agrobacterium vitis S4 transposase YP_002542596.1 54054 D 311402 CDS YP_002542597.1 222083194 7367808 complement(55855..58425) 1 NC_011984.1 bacteriophytochrome protein 58425 7367808 Avi_9083 Agrobacterium vitis S4 bacteriophytochrome protein YP_002542597.1 55855 R 311402 CDS YP_002542598.1 222083195 7367809 complement(58448..59395) 1 NC_011984.1 AraC family transcriptional regulator 59395 agpT 7367809 agpT Agrobacterium vitis S4 AraC family transcriptional regulator YP_002542598.1 58448 R 311402 CDS YP_002542599.1 222083196 7367810 60362..62647 1 NC_011984.1 methyl-accepting chemotaxis protein 62647 mcpC 7367810 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002542599.1 60362 D 311402 CDS YP_002542600.1 222083197 7367813 64855..65088 1 NC_011984.1 hypothetical protein 65088 7367813 Avi_9093 Agrobacterium vitis S4 hypothetical protein YP_002542600.1 64855 D 311402 CDS YP_002542601.1 222083198 7367815 complement(66774..67127) 1 NC_011984.1 transposition-related protein 67127 7367815 Avi_9096 Agrobacterium vitis S4 transposition-related protein YP_002542601.1 66774 R 311402 CDS YP_002542602.1 222083199 7367816 complement(67124..67612) 1 NC_011984.1 TRm1a transposase 67612 7367816 Avi_9097 Agrobacterium vitis S4 TRm1a transposase YP_002542602.1 67124 R 311402 CDS YP_002542603.1 222083200 7367817 complement(67960..69096) 1 NC_011984.1 bacteriophytochrome protein 69096 7367817 Avi_9098 Agrobacterium vitis S4 bacteriophytochrome protein YP_002542603.1 67960 R 311402 CDS YP_002542604.1 222083201 7367818 complement(69096..69665) 1 NC_011984.1 protein-glutamate methylesterase 69665 cheB 7367818 cheB Agrobacterium vitis S4 protein-glutamate methylesterase YP_002542604.1 69096 R 311402 CDS YP_002542605.1 222083202 7367819 complement(69662..70495) 1 NC_011984.1 chemotaxis methyltransferase 70495 cheR 7367819 cheR Agrobacterium vitis S4 chemotaxis methyltransferase YP_002542605.1 69662 R 311402 CDS YP_002542606.1 222083203 7367820 complement(70492..73929) 1 NC_011984.1 multi-sensor hybrid histidine kinase 73929 7367820 Avi_9103 Agrobacterium vitis S4 multi-sensor hybrid histidine kinase YP_002542606.1 70492 R 311402 CDS YP_002542607.1 222083204 7367821 74206..74586 1 NC_011984.1 hypothetical protein 74586 7367821 Avi_9104 Agrobacterium vitis S4 hypothetical protein YP_002542607.1 74206 D 311402 CDS YP_002542608.1 222083205 7367822 74603..75058 1 NC_011984.1 hypothetical protein 75058 7367822 Avi_9105 Agrobacterium vitis S4 hypothetical protein YP_002542608.1 74603 D 311402 CDS YP_002542609.1 222083206 7367823 75091..75744 1 NC_011984.1 hypothetical protein 75744 7367823 Avi_9106 Agrobacterium vitis S4 hypothetical protein YP_002542609.1 75091 D 311402 CDS YP_002542610.1 222083207 7367824 75741..76172 1 NC_011984.1 pilT protein, N-terminal 76172 7367824 Avi_9108 Agrobacterium vitis S4 pilT protein, N-terminal YP_002542610.1 75741 D 311402 CDS YP_002542611.1 222083208 7367825 complement(76207..77067) 1 NC_011984.1 hypothetical protein 77067 7367825 Avi_9109 Agrobacterium vitis S4 hypothetical protein YP_002542611.1 76207 R 311402 CDS YP_002542612.1 222083209 7367829 complement(79068..79436) 1 NC_011984.1 transposase protein 79436 7367829 Avi_9114 Agrobacterium vitis S4 transposase protein YP_002542612.1 79068 R 311402 CDS YP_002542613.1 222083210 7367830 complement(79451..79828) 1 NC_011984.1 transposase protein 79828 7367830 Avi_9115 Agrobacterium vitis S4 transposase protein YP_002542613.1 79451 R 311402 CDS YP_002542614.1 222083211 7367831 79930..80811 1 NC_011984.1 molybdopterin biosynthesis protein 80811 moeB 7367831 moeB Agrobacterium vitis S4 molybdopterin biosynthesis protein YP_002542614.1 79930 D 311402 CDS YP_002542615.1 222083212 7367832 80928..81428 1 NC_011984.1 hypothetical protein 81428 7367832 Avi_9117 Agrobacterium vitis S4 hypothetical protein YP_002542615.1 80928 D 311402 CDS YP_002542616.1 222083213 7367672 complement(81683..83116) 1 NC_011984.1 pyruvate kinase 83116 pykA 7367672 pykA Agrobacterium vitis S4 pyruvate kinase YP_002542616.1 81683 R 311402 CDS YP_002542617.1 222083214 7367673 complement(83123..84358) 1 NC_011984.1 hydroxypyruvate reductase 84358 7367673 Avi_9119 Agrobacterium vitis S4 hydroxypyruvate reductase YP_002542617.1 83123 R 311402 CDS YP_002542618.1 222083215 7367674 complement(84388..85476) 1 NC_011984.1 tartrate dehydrogenase 85476 7367674 Avi_9120 Agrobacterium vitis S4 tartrate dehydrogenase YP_002542618.1 84388 R 311402 CDS YP_002542619.1 222083216 7367675 complement(85498..86796) 1 NC_011984.1 MFS permease 86796 7367675 Avi_9121 Agrobacterium vitis S4 MFS permease YP_002542619.1 85498 R 311402 CDS YP_002542620.1 222083217 7367676 86920..87834 1 NC_011984.1 LysR family transcriptional regulator 87834 7367676 Avi_9122 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002542620.1 86920 D 311402 CDS YP_002542621.1 222083218 7367677 complement(88238..88753) 1 NC_011984.1 gluconokinase 88753 gntK 7367677 gntK Agrobacterium vitis S4 gluconokinase YP_002542621.1 88238 R 311402 CDS YP_002542622.1 222083219 7367678 complement(88901..89671) 1 NC_011984.1 catalyzes the formation of 5-dehydro-D-gluconate from D-gluconate; gluconate 5-dehydrogenase 89671 idnO 7367678 idnO Agrobacterium vitis S4 gluconate 5-dehydrogenase YP_002542622.1 88901 R 311402 CDS YP_002542623.1 222083220 7367679 complement(89674..91161) 1 NC_011984.1 ABC transporter nucleotide binding/ATPase protein (sugar) 91161 7367679 Avi_9125 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (sugar) YP_002542623.1 89674 R 311402 CDS YP_002542624.1 222083221 7367680 complement(91158..92210) 1 NC_011984.1 ribose ABC transporter permease 92210 rbsC 7367680 rbsC Agrobacterium vitis S4 ribose ABC transporter permease YP_002542624.1 91158 R 311402 CDS YP_002542625.1 222083222 7367681 complement(92339..93454) 1 NC_011984.1 sugar ABC transporter (sugar-binding protein) 93454 7367681 Avi_9127 Agrobacterium vitis S4 sugar ABC transporter (sugar-binding protein) YP_002542625.1 92339 R 311402 CDS YP_002542626.1 222083223 7367682 93805..95847 1 NC_011984.1 hydantoin utilization protein 95847 hyuA 7367682 hyuA Agrobacterium vitis S4 hydantoin utilization protein YP_002542626.1 93805 D 311402 CDS YP_002542627.1 222083224 7367683 95913..97835 1 NC_011984.1 hydantoin utilization protein 97835 hyuB 7367683 hyuB Agrobacterium vitis S4 hydantoin utilization protein YP_002542627.1 95913 D 311402 CDS YP_002542628.1 222083225 7367684 97851..99242 1 NC_011984.1 aminotransferase 99242 7367684 Avi_9130 Agrobacterium vitis S4 aminotransferase YP_002542628.1 97851 D 311402 CDS YP_002542629.1 222083226 7367685 99284..100354 1 NC_011984.1 transcriptional regulator LacI family 100354 7367685 Avi_9131 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002542629.1 99284 D 311402 CDS YP_002542630.1 222083227 7367686 complement(100905..101066) 1 NC_011984.1 transposase 101066 7367686 Avi_9132 Agrobacterium vitis S4 transposase YP_002542630.1 100905 R 311402 CDS YP_002542631.1 222083228 7367687 complement(101338..102495) 1 NC_011984.1 transposase 102495 tnp 7367687 tnp Agrobacterium vitis S4 transposase YP_002542631.1 101338 R 311402 CDS YP_002542632.1 222083229 7367688 complement(102532..103074) 1 NC_011984.1 transposase 103074 7367688 Avi_9135 Agrobacterium vitis S4 transposase YP_002542632.1 102532 R 311402 CDS YP_002542633.1 222083230 7367691 complement(104195..105196) 1 NC_011984.1 ABC transporter nucleotide binding/ATPase protein (oligopeptide) 105196 7367691 Avi_9140 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase protein (oligopeptide) YP_002542633.1 104195 R 311402 CDS YP_002542634.1 222083231 7367692 complement(105193..106836) 1 NC_011984.1 ABC transporter ATPase 106836 dppD 7367692 dppD Agrobacterium vitis S4 ABC transporter ATPase YP_002542634.1 105193 R 311402 CDS YP_002542635.1 222083232 7367693 complement(107004..107954) 1 NC_011984.1 peptide ABC transporter permease 107954 dppB 7367693 dppB Agrobacterium vitis S4 peptide ABC transporter permease YP_002542635.1 107004 R 311402 CDS YP_002542636.1 222083233 7367694 complement(108061..109584) 1 NC_011984.1 ABC transporter substrate binding protein (oligopeptide) 109584 7367694 Avi_9144 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002542636.1 108061 R 311402 CDS YP_002542637.1 222083234 7367695 complement(109964..110845) 1 NC_011984.1 GntR family transcriptional regulator 110845 7367695 Avi_9145 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002542637.1 109964 R 311402 CDS YP_002542638.1 222083235 7367696 110960..111943 1 NC_011984.1 yurP 111943 7367696 Avi_9146 Agrobacterium vitis S4 yurP YP_002542638.1 110960 D 311402 CDS YP_002542639.1 222083236 7367697 112114..112980 1 NC_011984.1 Sugar kinase ribokinase family 112980 7367697 Avi_9147 Agrobacterium vitis S4 Sugar kinase ribokinase family YP_002542639.1 112114 D 311402 CDS YP_002542640.1 222083237 7367698 113085..115148 1 NC_011984.1 hydantoin utilization protein 115148 hyuA 7367698 hyuA Agrobacterium vitis S4 hydantoin utilization protein YP_002542640.1 113085 D 311402 CDS YP_002542641.1 222083238 7367699 115141..116841 1 NC_011984.1 hydantoin utilization protein 116841 hyuB 7367699 hyuB Agrobacterium vitis S4 hydantoin utilization protein YP_002542641.1 115141 D 311402 CDS YP_002542642.1 222083239 7367700 116912..117685 1 NC_011984.1 dinucleotide-utilizing enzyme 117685 7367700 Avi_9150 Agrobacterium vitis S4 dinucleotide-utilizing enzyme YP_002542642.1 116912 D 311402 CDS YP_002542643.1 222083240 7367701 117724..118692 1 NC_011984.1 threonine dehydratase 118692 ilvA 7367701 ilvA Agrobacterium vitis S4 threonine dehydratase YP_002542643.1 117724 D 311402 CDS YP_002542644.1 222083241 7367702 118728..119957 1 NC_011984.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 119957 7367702 Avi_9152 Agrobacterium vitis S4 aspartate aminotransferase YP_002542644.1 118728 D 311402 CDS YP_002542645.1 222083242 7367703 120104..120742 1 NC_011984.1 hypothetical protein 120742 7367703 Avi_9153 Agrobacterium vitis S4 hypothetical protein YP_002542645.1 120104 D 311402 CDS YP_002542646.1 222083243 7367704 120739..121224 1 NC_011984.1 hypothetical protein 121224 7367704 Avi_9154 Agrobacterium vitis S4 hypothetical protein YP_002542646.1 120739 D 311402 CDS YP_002542647.1 222083244 7367705 121509..122600 1 NC_011984.1 DNA polymerase III alpha chain 122600 dnaE 7367705 dnaE Agrobacterium vitis S4 DNA polymerase III alpha chain YP_002542647.1 121509 D 311402 CDS YP_002542648.1 222083245 7367706 123011..123358 1 NC_011984.1 Helicase subunit of the DNA excision repair complex 123358 7367706 Avi_9156 Agrobacterium vitis S4 Helicase subunit of the DNA excision repair complex YP_002542648.1 123011 D 311402 CDS YP_002542649.1 222083246 7367707 123569..124531 1 NC_011984.1 hypothetical protein 124531 7367707 Avi_9158 Agrobacterium vitis S4 hypothetical protein YP_002542649.1 123569 D 311402 CDS YP_002542650.1 222083247 7367708 124737..125276 1 NC_011984.1 hypothetical protein 125276 7367708 Avi_9160 Agrobacterium vitis S4 hypothetical protein YP_002542650.1 124737 D 311402 CDS YP_002542651.1 222083248 7367709 125291..125692 1 NC_011984.1 hypothetical protein 125692 7367709 Avi_9161 Agrobacterium vitis S4 hypothetical protein YP_002542651.1 125291 D 311402 CDS YP_002542652.1 222083249 7367710 125793..130886 1 NC_011984.1 helicase SNF2 family 130886 7367710 Avi_9162 Agrobacterium vitis S4 helicase SNF2 family YP_002542652.1 125793 D 311402 CDS YP_002542653.1 222083250 7367711 complement(131019..131879) 1 NC_011984.1 hypothetical protein 131879 7367711 Avi_9163 Agrobacterium vitis S4 hypothetical protein YP_002542653.1 131019 R 311402 CDS YP_002542654.1 222083251 7367712 132159..133997 1 NC_011984.1 ParB family; plasmid partitioning protein 133997 parB 7367712 parB Agrobacterium vitis S4 plasmid partitioning protein YP_002542654.1 132159 D 311402 CDS YP_002542655.1 222083252 7367713 134098..134568 1 NC_011984.1 hypothetical protein 134568 7367713 Avi_9166 Agrobacterium vitis S4 hypothetical protein YP_002542655.1 134098 D 311402 CDS YP_002542656.1 222083253 7367714 134565..135455 1 NC_011984.1 hypothetical protein 135455 7367714 Avi_9167 Agrobacterium vitis S4 hypothetical protein YP_002542656.1 134565 D 311402 CDS YP_002542657.1 222083254 7367715 135452..136147 1 NC_011984.1 hypothetical protein 136147 7367715 Avi_9168 Agrobacterium vitis S4 hypothetical protein YP_002542657.1 135452 D 311402 CDS YP_002542658.1 222083255 7367716 136688..137287 1 NC_011984.1 hypothetical protein 137287 7367716 Avi_9171 Agrobacterium vitis S4 hypothetical protein YP_002542658.1 136688 D 311402 CDS YP_002542659.1 222083256 7367717 137593..138525 1 NC_011984.1 antirestriction protein 138525 ardC 7367717 ardC Agrobacterium vitis S4 antirestriction protein YP_002542659.1 137593 D 311402 CDS YP_002542660.1 222083257 7367718 138522..139493 1 NC_011984.1 hypothetical protein 139493 7367718 Avi_9174 Agrobacterium vitis S4 hypothetical protein YP_002542660.1 138522 D 311402 CDS YP_002542661.1 222083258 7367719 140093..140449 1 NC_011984.1 hypothetical protein 140449 7367719 Avi_9175 Agrobacterium vitis S4 hypothetical protein YP_002542661.1 140093 D 311402 CDS YP_002542662.1 222083259 7367720 140770..140940 1 NC_011984.1 hypothetical protein 140940 7367720 Avi_9177 Agrobacterium vitis S4 hypothetical protein YP_002542662.1 140770 D 311402 CDS YP_002542663.1 222083260 7367721 complement(140982..141260) 1 NC_011984.1 HNS-type DNA binding protein 141260 7367721 Avi_9178 Agrobacterium vitis S4 HNS-type DNA binding protein YP_002542663.1 140982 R 311402 CDS YP_002542664.1 222083261 7367722 complement(141398..141655) 1 NC_011984.1 hypothetical protein 141655 7367722 Avi_9182 Agrobacterium vitis S4 hypothetical protein YP_002542664.1 141398 R 311402 CDS YP_002542665.1 222083262 7367723 complement(141893..142276) 1 NC_011984.1 nuclease protein 142276 7367723 Avi_9184 Agrobacterium vitis S4 nuclease protein YP_002542665.1 141893 R 311402 CDS YP_002542666.1 222083263 7367724 complement(142273..142671) 1 NC_011984.1 hypothetical protein 142671 7367724 Avi_9185 Agrobacterium vitis S4 hypothetical protein YP_002542666.1 142273 R 311402 CDS YP_002542667.1 222083264 7367725 complement(142668..144638) 1 NC_011984.1 VirD4 family; conjugal transfer coupling protein TraG 144638 traG 7367725 traG Agrobacterium vitis S4 conjugal transfer coupling protein TraG YP_002542667.1 142668 R 311402 CDS YP_002542668.1 222083265 7367726 complement(144625..144870) 1 NC_011984.1 conjugal transfer protein TraD 144870 traD 7367726 traD Agrobacterium vitis S4 conjugal transfer protein TraD YP_002542668.1 144625 R 311402 CDS YP_002542669.1 222083266 7367727 complement(144845..145222) 1 NC_011984.1 conjugal transfer protein Dtr system 145222 traC 7367727 traC Agrobacterium vitis S4 conjugal transfer protein Dtr system YP_002542669.1 144845 R 311402 CDS YP_002542670.1 222083267 7367728 145321..148692 1 NC_011984.1 conjugal transfer system TraA; oriT nicking enzyme; Dtr system oriT relaxase 148692 traA 7367728 traA Agrobacterium vitis S4 Dtr system oriT relaxase YP_002542670.1 145321 D 311402 CDS YP_002542671.1 222083268 7367729 148689..149219 1 NC_011984.1 conjugal transfer pilin processing protease TraF 149219 traF 7367729 traF Agrobacterium vitis S4 conjugal transfer pilin processing protease TraF YP_002542671.1 148689 D 311402 CDS YP_002542672.1 222083269 7367730 149236..150447 1 NC_011984.1 conjugal transfer protein TraB 150447 traB 7367730 traB Agrobacterium vitis S4 conjugal transfer protein TraB YP_002542672.1 149236 D 311402 CDS YP_002542673.1 222083270 7367731 150465..151091 1 NC_011984.1 conjugal transfer protein TraH 151091 traH 7367731 traH Agrobacterium vitis S4 conjugal transfer protein TraH YP_002542673.1 150465 D 311402 CDS YP_002542674.1 222083271 7367732 151405..151713 1 NC_011984.1 transcriptional repressor 151713 traM 7367732 traM Agrobacterium vitis S4 transcriptional repressor YP_002542674.1 151405 D 311402 CDS YP_002542675.1 222083272 7367733 complement(151773..152477) 1 NC_011984.1 quorum-sensing transcriptional regulator; transcriptional regulator TraR 152477 traR 7367733 traR Agrobacterium vitis S4 transcriptional regulator TraR YP_002542675.1 151773 R 311402 CDS YP_002542676.1 222083273 7367734 complement(152864..153658) 1 NC_011984.1 hypothetical protein 153658 7367734 Avi_9196 Agrobacterium vitis S4 hypothetical protein YP_002542676.1 152864 R 311402 CDS YP_002542677.1 222083274 7367735 complement(153733..154812) 1 NC_011984.1 ABC transporter ATPase 154812 7367735 Avi_9197 Agrobacterium vitis S4 ABC transporter ATPase YP_002542677.1 153733 R 311402 CDS YP_002542678.1 222083275 7367736 complement(154815..155693) 1 NC_011984.1 ABC transporter 155693 7367736 Avi_9198 Agrobacterium vitis S4 ABC transporter YP_002542678.1 154815 R 311402 CDS YP_002542679.1 222083276 7367737 complement(155690..156562) 1 NC_011984.1 sugar ABC transporter permease 156562 7367737 Avi_9199 Agrobacterium vitis S4 sugar ABC transporter permease YP_002542679.1 155690 R 311402 CDS YP_002542680.1 222083277 7367738 complement(156633..157757) 1 NC_011984.1 sugar ABC transporter substrate-binding protein 157757 7367738 Avi_9200 Agrobacterium vitis S4 sugar ABC transporter substrate-binding protein YP_002542680.1 156633 R 311402 CDS YP_002542681.1 222083278 7367739 157922..159064 1 NC_011984.1 GntR family transcriptional regulator 159064 7367739 Avi_9201 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002542681.1 157922 D 311402 CDS YP_002542682.1 222083279 7367740 159826..160521 1 NC_011984.1 hypothetical protein 160521 7367740 Avi_9202 Agrobacterium vitis S4 hypothetical protein YP_002542682.1 159826 D 311402 CDS YP_002542683.1 222083280 7367741 complement(161260..162000) 1 NC_011984.1 3-oxoacyl-ACP reductase 162000 fabG 7367741 fabG Agrobacterium vitis S4 3-oxoacyl-ACP reductase YP_002542683.1 161260 R 311402 CDS YP_002542684.1 222083281 7367742 complement(161997..162929) 1 NC_011984.1 nucleoside-diphosphate-sugar epimerase 162929 7367742 Avi_9208 Agrobacterium vitis S4 nucleoside-diphosphate-sugar epimerase YP_002542684.1 161997 R 311402 CDS YP_002542685.1 222083282 7367744 164040..165197 1 NC_011984.1 transposase 165197 tnp 7367744 tnp Agrobacterium vitis S4 transposase YP_002542685.1 164040 D 311402 CDS YP_002542686.1 222083283 7367745 165466..166023 1 NC_011984.1 transposase for insertion sequence 166023 7367745 Avi_9214 Agrobacterium vitis S4 transposase for insertion sequence YP_002542686.1 165466 D 311402 CDS YP_002542687.1 222083284 7367747 167092..168162 1 NC_011984.1 HlyD family secretion protein 168162 7367747 Avi_9216 Agrobacterium vitis S4 HlyD family secretion protein YP_002542687.1 167092 D 311402 CDS YP_002542688.1 222083285 7367748 168165..170906 1 NC_011984.1 ABC transporter ATPase 170906 7367748 Avi_9217 Agrobacterium vitis S4 ABC transporter ATPase YP_002542688.1 168165 D 311402 CDS YP_002542689.1 222083286 7367749 170909..172033 1 NC_011984.1 ABC transporter 172033 7367749 Avi_9218 Agrobacterium vitis S4 ABC transporter YP_002542689.1 170909 D 311402 CDS YP_002542690.1 222083287 7367750 172654..173796 1 NC_011984.1 NAD(P) transhydrogenase alpha subunit 173796 pntA 7367750 pntA Agrobacterium vitis S4 NAD(P) transhydrogenase alpha subunit YP_002542690.1 172654 D 311402 CDS YP_002542691.1 222083288 7367751 173793..174101 1 NC_011984.1 NAD/NADP transhydrogenase alpha subunit 174101 7367751 Avi_9220 Agrobacterium vitis S4 NAD/NADP transhydrogenase alpha subunit YP_002542691.1 173793 D 311402 CDS YP_002542692.1 222083289 7367752 174105..175538 1 NC_011984.1 NAD(P)+ transhydrogenase beta chain 175538 pntB 7367752 pntB Agrobacterium vitis S4 NAD(P)+ transhydrogenase beta chain YP_002542692.1 174105 D 311402 CDS YP_002542693.1 222083290 7367753 175580..176971 1 NC_011984.1 NAD-dependent succinate aldehyde dehydrogenase 176971 attK 7367753 attK Agrobacterium vitis S4 NAD-dependent succinate aldehyde dehydrogenase YP_002542693.1 175580 D 311402 CDS YP_002542694.1 222083291 7367868 176968..178011 1 NC_011984.1 alcohol dehydrogenase 178011 adhP 7367868 adhP Agrobacterium vitis S4 alcohol dehydrogenase YP_002542694.1 176968 D 311402 CDS YP_002542695.1 222083292 7367833 complement(178928..179215) 1 NC_011984.1 transposase 179215 7367833 Avi_9225 Agrobacterium vitis S4 transposase YP_002542695.1 178928 R 311402 CDS YP_002542696.1 222083293 7367834 complement(179212..179709) 1 NC_011984.1 transcriptional regulator 179709 7367834 Avi_9227 Agrobacterium vitis S4 transcriptional regulator YP_002542696.1 179212 R 311402 CDS YP_002542697.1 222083294 7367835 179754..181268 1 NC_011984.1 hypothetical protein 181268 7367835 Avi_9228 Agrobacterium vitis S4 hypothetical protein YP_002542697.1 179754 D 311402 CDS YP_002542698.1 222083295 7367836 complement(181736..182365) 1 NC_011984.1 TetR family transcriptional regulator 182365 7367836 Avi_9229 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002542698.1 181736 R 311402 CDS YP_002542699.1 222083296 7367837 182583..183698 1 NC_011984.1 epoxide hydrolase 183698 7367837 Avi_9230 Agrobacterium vitis S4 epoxide hydrolase YP_002542699.1 182583 D 311402 CDS YP_002542700.1 222083297 7367838 complement(183824..184567) 1 NC_011984.1 TetR family transcriptional regulator 184567 7367838 Avi_9231 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002542700.1 183824 R 311402 CDS YP_002542701.1 222083298 7367839 184708..185838 1 NC_011984.1 Monooxygenase FAD-binding 185838 7367839 Avi_9233 Agrobacterium vitis S4 Monooxygenase FAD-binding YP_002542701.1 184708 D 311402 CDS YP_002542702.1 222083299 7367842 complement(188108..188836) 1 NC_011984.1 ABC transporter ATPase 188836 7367842 Avi_9237 Agrobacterium vitis S4 ABC transporter ATPase YP_002542702.1 188108 R 311402 CDS YP_002542703.1 222083300 7367843 complement(188833..189540) 1 NC_011984.1 amino acid ABC transporter permease 189540 7367843 Avi_9239 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002542703.1 188833 R 311402 CDS YP_002542704.1 222083301 7367844 complement(189540..190220) 1 NC_011984.1 ABC transporter permease 190220 7367844 Avi_9240 Agrobacterium vitis S4 ABC transporter permease YP_002542704.1 189540 R 311402 CDS YP_002542705.1 222083302 7367845 complement(190255..191073) 1 NC_011984.1 amino acid ABC transporter substrate-binding protein 191073 7367845 Avi_9241 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002542705.1 190255 R 311402 CDS YP_002542706.1 222083303 7367846 191370..192737 1 NC_011984.1 hypothetical protein 192737 7367846 Avi_9243 Agrobacterium vitis S4 hypothetical protein YP_002542706.1 191370 D 311402 CDS YP_002542707.1 222083304 7367847 complement(192798..193478) 1 NC_011984.1 GntR family transcriptional regulator 193478 7367847 Avi_9244 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002542707.1 192798 R 311402 CDS YP_002542708.1 222083305 7367848 193815..194564 1 NC_011984.1 electron transfer flavoprotein beta subunit 194564 etfB 7367848 etfB Agrobacterium vitis S4 electron transfer flavoprotein beta subunit YP_002542708.1 193815 D 311402 CDS YP_002542709.1 222083306 7367849 194588..195547 1 NC_011984.1 electron transfer flavoprotein alpha subunit 195547 etfA 7367849 etfA Agrobacterium vitis S4 electron transfer flavoprotein alpha subunit YP_002542709.1 194588 D 311402 CDS YP_002542710.1 222083307 7367850 195555..196457 1 NC_011984.1 pyrroline-5-carboxylate reductase 196457 proC 7367850 proC Agrobacterium vitis S4 pyrroline-5-carboxylate reductase YP_002542710.1 195555 D 311402 CDS YP_002542711.1 222083308 7367851 complement(196892..197008) 1 NC_011984.1 transposase 197008 7367851 Avi_9251 Agrobacterium vitis S4 transposase YP_002542711.1 196892 R 311402 CDS YP_002542712.1 222083309 7367852 197317..198570 1 NC_011984.1 phosphonoacetate hydrolase 198570 7367852 Avi_9252 Agrobacterium vitis S4 phosphonoacetate hydrolase YP_002542712.1 197317 D 311402 CDS YP_002542713.1 222083310 7367853 complement(198594..199517) 1 NC_011984.1 LysR family transcriptional regulator 199517 7367853 Avi_9253 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002542713.1 198594 R 311402 CDS YP_002542714.1 222083311 7367854 complement(200194..200544) 1 NC_011984.1 hypothetical protein 200544 7367854 Avi_9254 Agrobacterium vitis S4 hypothetical protein YP_002542714.1 200194 R 311402 CDS YP_002542715.1 222083312 7367855 complement(201057..202370) 1 NC_011984.1 conjugal transfer protein TrbI 202370 trbI 7367855 trbI Agrobacterium vitis S4 conjugal transfer protein TrbI YP_002542715.1 201057 R 311402 CDS YP_002542716.1 222083313 7367856 complement(202382..202858) 1 NC_011984.1 conjugal transfer protein TrbH 202858 trbH 7367856 trbH Agrobacterium vitis S4 conjugal transfer protein TrbH YP_002542716.1 202382 R 311402 CDS YP_002542717.1 222083314 7367857 complement(202858..203748) 1 NC_011984.1 conjugal transfer protein TrbG 203748 trbG 7367857 trbG Agrobacterium vitis S4 conjugal transfer protein TrbG YP_002542717.1 202858 R 311402 CDS YP_002542718.1 222083315 7367858 complement(203730..204392) 1 NC_011984.1 conjugal transfer protein TrbF 204392 trbF 7367858 trbF Agrobacterium vitis S4 conjugal transfer protein TrbF YP_002542718.1 203730 R 311402 CDS YP_002542719.1 222083316 7367859 complement(204407..205603) 1 NC_011984.1 conjugal transfer protein TrbL 205603 trbL 7367859 trbL Agrobacterium vitis S4 conjugal transfer protein TrbL YP_002542719.1 204407 R 311402 CDS YP_002542720.1 222083317 7367860 complement(205597..205818) 1 NC_011984.1 entry-exclusion protein 205818 trbK 7367860 trbK Agrobacterium vitis S4 entry-exclusion protein YP_002542720.1 205597 R 311402 CDS YP_002542721.1 222083318 7367861 complement(205815..206624) 1 NC_011984.1 conjugal transfer protein TrbJ 206624 trbJ 7367861 trbJ Agrobacterium vitis S4 conjugal transfer protein TrbJ YP_002542721.1 205815 R 311402 CDS YP_002542722.1 222083319 7367862 complement(206596..209064) 1 NC_011984.1 type IV secretion system ATPase; VirB4 family; conjugal transfer protein TrbE 209064 trbE 7367862 trbE Agrobacterium vitis S4 conjugal transfer protein TrbE YP_002542722.1 206596 R 311402 CDS YP_002542723.1 222083320 7367863 complement(209075..209374) 1 NC_011984.1 conjugal transfer protein TrbD 209374 trbD 7367863 trbD Agrobacterium vitis S4 conjugal transfer protein TrbD YP_002542723.1 209075 R 311402 CDS YP_002542724.1 222083321 7367864 complement(209367..209771) 1 NC_011984.1 conjugal transfer protein TrbC 209771 trbC 7367864 trbC Agrobacterium vitis S4 conjugal transfer protein TrbC YP_002542724.1 209367 R 311402 CDS YP_002542725.1 222083322 7367865 complement(209761..210732) 1 NC_011984.1 VirB11 family protein; ATPase; conjugal transfer protein TrbB 210732 trbB 7367865 trbB Agrobacterium vitis S4 conjugal transfer protein TrbB YP_002542725.1 209761 R 311402 CDS YP_002542726.1 222083323 7367866 complement(210729..211367) 1 NC_011984.1 putative autoinducer synthesis protein 211367 traI 7367866 traI Agrobacterium vitis S4 putative autoinducer synthesis protein YP_002542726.1 210729 R 311402 CDS YP_002546471.1 222102330 7380026 206..1435 1 NC_011986.1 replication protein A 1435 repA 7380026 repA Agrobacterium vitis S4 replication protein A YP_002546471.1 206 D 311402 CDS YP_002546472.1 222102331 7379946 1481..2518 1 NC_011986.1 replication protein B 2518 repB 7379946 repB Agrobacterium vitis S4 replication protein B YP_002546472.1 1481 D 311402 CDS YP_002546473.1 222102332 7379947 2673..3887 1 NC_011986.1 replication initiation protein RepC 3887 repC 7379947 repC Agrobacterium vitis S4 replication initiation protein RepC YP_002546473.1 2673 D 311402 CDS YP_002546474.1 222102333 7379948 complement(4021..4503) 1 NC_011986.1 helix turn helix transcriptional regulator 4503 7379948 Avi_9804 Agrobacterium vitis S4 helix turn helix transcriptional regulator YP_002546474.1 4021 R 311402 CDS YP_002546475.1 222102334 7379949 complement(5117..5581) 1 NC_011986.1 hypothetical protein 5581 7379949 Avi_9805 Agrobacterium vitis S4 hypothetical protein YP_002546475.1 5117 R 311402 CDS YP_002546476.1 222102335 7379950 complement(5586..6287) 1 NC_011986.1 chromosome partitioning protein 6287 parA 7379950 parA Agrobacterium vitis S4 chromosome partitioning protein YP_002546476.1 5586 R 311402 CDS YP_002546477.1 222102336 7379951 6996..7397 1 NC_011986.1 mob protein 7397 7379951 Avi_9807 Agrobacterium vitis S4 mob protein YP_002546477.1 6996 D 311402 CDS YP_002546478.1 222102337 7379952 7399..10161 1 NC_011986.1 Ti-type conjugative transfer relaxase TraA 10161 traA 7379952 traA Agrobacterium vitis S4 Ti-type conjugative transfer relaxase TraA YP_002546478.1 7399 D 311402 CDS YP_002546479.1 222102338 7379953 complement(10420..12519) 1 NC_011986.1 conjugative coupling protein 12519 avhD4 7379953 avhD4 Agrobacterium vitis S4 conjugative coupling protein YP_002546479.1 10420 R 311402 CDS YP_002546480.1 222102339 7379954 complement(12516..13538) 1 NC_011986.1 type IV secretion protein AvhB11 13538 avhB11 7379954 avhB11 Agrobacterium vitis S4 type IV secretion protein AvhB11 YP_002546480.1 12516 R 311402 CDS YP_002546481.1 222102340 7379955 complement(13519..14727) 1 NC_011986.1 type IV secretion protein AvhB10 14727 avhB10 7379955 avhB10 Agrobacterium vitis S4 type IV secretion protein AvhB10 YP_002546481.1 13519 R 311402 CDS YP_002546482.1 222102341 7379956 complement(14727..15536) 1 NC_011986.1 type IV secretion protein AvhB9 15536 avhB9 7379956 avhB9 Agrobacterium vitis S4 type IV secretion protein AvhB9 YP_002546482.1 14727 R 311402 CDS YP_002546483.1 222102342 7379957 complement(15533..16225) 1 NC_011986.1 Type IV secretory pathway component VirB8 16225 avhB8 7379957 avhB8 Agrobacterium vitis S4 Type IV secretory pathway component VirB8 YP_002546483.1 15533 R 311402 CDS YP_002546484.1 222102343 7379958 complement(16261..17289) 1 NC_011986.1 type IV secretion protein AvhB6 17289 avhB6 7379958 avhB6 Agrobacterium vitis S4 type IV secretion protein AvhB6 YP_002546484.1 16261 R 311402 CDS YP_002546485.1 222102344 7379959 complement(17302..17529) 1 NC_011986.1 hypothetical protein 17529 7379959 Avi_9817 Agrobacterium vitis S4 hypothetical protein YP_002546485.1 17302 R 311402 CDS YP_002546486.1 222102345 7379960 complement(17522..18220) 1 NC_011986.1 hypothetical protein 18220 7379960 Avi_9818 Agrobacterium vitis S4 hypothetical protein YP_002546486.1 17522 R 311402 CDS YP_002546487.1 222102346 7379961 complement(18233..19321) 1 NC_011986.1 type IV system transglycosylase 19321 avhB1b 7379961 avhB1b Agrobacterium vitis S4 type IV system transglycosylase YP_002546487.1 18233 R 311402 CDS YP_002546488.1 222102347 7379962 complement(19318..21777) 1 NC_011986.1 type IV secretion protein AvhB4 21777 avhB4 7379962 avhB4 Agrobacterium vitis S4 type IV secretion protein AvhB4 YP_002546488.1 19318 R 311402 CDS YP_002546489.1 222102348 7379963 complement(22081..22431) 1 NC_011986.1 type IV secrection system pilin protein 22431 avhB2 7379963 avhB2 Agrobacterium vitis S4 type IV secrection system pilin protein YP_002546489.1 22081 R 311402 CDS YP_002546490.1 222102349 7379964 complement(22444..23412) 1 NC_011986.1 type IV system transglycosylase 23412 avhB1a 7379964 avhB1a Agrobacterium vitis S4 type IV system transglycosylase YP_002546490.1 22444 R 311402 CDS YP_002546491.1 222102350 7379965 23570..24178 1 NC_011986.1 hypothetical protein 24178 7379965 Avi_9825 Agrobacterium vitis S4 hypothetical protein YP_002546491.1 23570 D 311402 CDS YP_002546492.1 222102351 7379966 24175..24714 1 NC_011986.1 hypothetical protein 24714 7379966 Avi_9826 Agrobacterium vitis S4 hypothetical protein YP_002546492.1 24175 D 311402 CDS YP_002546493.1 222102352 7379967 24711..25415 1 NC_011986.1 Micrococcal nuclease (thermonuclease) 25415 7379967 Avi_9827 Agrobacterium vitis S4 Micrococcal nuclease (thermonuclease) YP_002546493.1 24711 D 311402 CDS YP_002546494.1 222102353 7379968 25416..25796 1 NC_011986.1 hypothetical protein 25796 7379968 Avi_9829 Agrobacterium vitis S4 hypothetical protein YP_002546494.1 25416 D 311402 CDS YP_002546495.1 222102354 7379969 25801..26397 1 NC_011986.1 hypothetical protein 26397 7379969 Avi_9830 Agrobacterium vitis S4 hypothetical protein YP_002546495.1 25801 D 311402 CDS YP_002546496.1 222102355 7379970 26408..26833 1 NC_011986.1 hypothetical protein 26833 7379970 Avi_9831 Agrobacterium vitis S4 hypothetical protein YP_002546496.1 26408 D 311402 CDS YP_002546497.1 222102356 7379971 complement(26850..27182) 1 NC_011986.1 hypothetical protein 27182 7379971 Avi_9832 Agrobacterium vitis S4 hypothetical protein YP_002546497.1 26850 R 311402 CDS YP_002546498.1 222102357 7379972 27576..28208 1 NC_011986.1 Resolvase Protein 28208 7379972 Avi_9833 Agrobacterium vitis S4 Resolvase Protein YP_002546498.1 27576 D 311402 CDS YP_002546499.1 222102358 7379973 complement(28344..29264) 1 NC_011986.1 hypothetical protein 29264 7379973 Avi_9834 Agrobacterium vitis S4 hypothetical protein YP_002546499.1 28344 R 311402 CDS YP_002546500.1 222102359 7379974 29463..31016 1 NC_011986.1 transposase 31016 tnp 7379974 tnp Agrobacterium vitis S4 transposase YP_002546500.1 29463 D 311402 CDS YP_002546501.1 222102360 7379975 31029..31805 1 NC_011986.1 transposase 31805 7379975 Avi_9836 Agrobacterium vitis S4 transposase YP_002546501.1 31029 D 311402 CDS YP_002546502.1 222102361 7379976 32043..32372 1 NC_011986.1 transposase protein 32372 7379976 Avi_9837 Agrobacterium vitis S4 transposase protein YP_002546502.1 32043 D 311402 CDS YP_002546503.1 222102362 7379977 32369..33274 1 NC_011986.1 transposase 33274 tnp 7379977 tnp Agrobacterium vitis S4 transposase YP_002546503.1 32369 D 311402 CDS YP_002546504.1 222102363 7379978 complement(33821..35170) 1 NC_011986.1 adenylate cyclase protein 35170 7379978 Avi_9841 Agrobacterium vitis S4 adenylate cyclase protein YP_002546504.1 33821 R 311402 CDS YP_002546505.1 222102364 7379979 complement(35256..35540) 1 NC_011986.1 hypothetical protein 35540 7379979 Avi_9842 Agrobacterium vitis S4 hypothetical protein YP_002546505.1 35256 R 311402 CDS YP_002546506.1 222102365 7379980 complement(35563..36042) 1 NC_011986.1 copper tolerance protein 36042 copC 7379980 copC Agrobacterium vitis S4 copper tolerance protein YP_002546506.1 35563 R 311402 CDS YP_002546507.1 222102366 7379981 complement(36182..36451) 1 NC_011986.1 hypothetical protein 36451 7379981 Avi_9845 Agrobacterium vitis S4 hypothetical protein YP_002546507.1 36182 R 311402 CDS YP_002546508.1 222102367 7379945 36644..37321 1 NC_011986.1 two component response regulator 37321 7379945 Avi_9846 Agrobacterium vitis S4 two component response regulator YP_002546508.1 36644 D 311402 CDS YP_002546509.1 222102368 7379982 37308..38681 1 NC_011986.1 two component sensor kinase 38681 7379982 Avi_9847 Agrobacterium vitis S4 two component sensor kinase YP_002546509.1 37308 D 311402 CDS YP_002546510.1 222102369 7379983 complement(38799..39083) 1 NC_011986.1 hypothetical protein 39083 7379983 Avi_9848 Agrobacterium vitis S4 hypothetical protein YP_002546510.1 38799 R 311402 CDS YP_002546511.1 222102370 7379984 complement(39106..39585) 1 NC_011986.1 copper tolerance protein 39585 copC 7379984 copC Agrobacterium vitis S4 copper tolerance protein YP_002546511.1 39106 R 311402 CDS YP_002546512.1 222102371 7379985 complement(39618..40967) 1 NC_011986.1 multicopper oxidase 40967 copA 7379985 copA Agrobacterium vitis S4 multicopper oxidase YP_002546512.1 39618 R 311402 CDS YP_002546513.1 222102372 7379986 complement(40981..42441) 1 NC_011986.1 copper tolerance protein 42441 copB 7379986 copB Agrobacterium vitis S4 copper tolerance protein YP_002546513.1 40981 R 311402 CDS YP_002546514.1 222102373 7379987 complement(42438..42707) 1 NC_011986.1 hypothetical protein 42707 7379987 Avi_9852 Agrobacterium vitis S4 hypothetical protein YP_002546514.1 42438 R 311402 CDS YP_002546515.1 222102374 7379988 complement(42755..43141) 1 NC_011986.1 hypothetical protein 43141 7379988 Avi_9853 Agrobacterium vitis S4 hypothetical protein YP_002546515.1 42755 R 311402 CDS YP_002546516.1 222102375 7379989 43389..43733 1 NC_011986.1 hypothetical protein 43733 7379989 Avi_9854 Agrobacterium vitis S4 hypothetical protein YP_002546516.1 43389 D 311402 CDS YP_002546517.1 222102376 7379990 43776..44204 1 NC_011986.1 hypothetical protein 44204 7379990 Avi_9856 Agrobacterium vitis S4 hypothetical protein YP_002546517.1 43776 D 311402 CDS YP_002546518.1 222102377 7379991 44214..44552 1 NC_011986.1 hypothetical protein 44552 7379991 Avi_9857 Agrobacterium vitis S4 hypothetical protein YP_002546518.1 44214 D 311402 CDS YP_002546519.1 222102378 7379992 complement(44651..46864) 1 NC_011986.1 copper-translocating P-type ATPase 46864 7379992 Avi_9859 Agrobacterium vitis S4 copper-translocating P-type ATPase YP_002546519.1 44651 R 311402 CDS YP_002546520.1 222102379 7379993 complement(47015..47299) 1 NC_011986.1 hypothetical protein 47299 7379993 Avi_9861 Agrobacterium vitis S4 hypothetical protein YP_002546520.1 47015 R 311402 CDS YP_002546521.1 222102380 7379994 47523..48107 1 NC_011986.1 cytochrome C-like protein 48107 7379994 Avi_9862 Agrobacterium vitis S4 cytochrome C-like protein YP_002546521.1 47523 D 311402 CDS YP_002546522.1 222102381 7379995 complement(48119..48562) 1 NC_011986.1 Cu(I)-responsive transcriptional regulator 48562 cueR 7379995 cueR Agrobacterium vitis S4 Cu(I)-responsive transcriptional regulator YP_002546522.1 48119 R 311402 CDS YP_002546523.1 222102382 7379996 complement(48578..51058) 1 NC_011986.1 heavy-metal transporting P-type ATPase 51058 7379996 Avi_9864 Agrobacterium vitis S4 heavy-metal transporting P-type ATPase YP_002546523.1 48578 R 311402 CDS YP_002546524.1 222102383 7379997 complement(51211..51414) 1 NC_011986.1 hypothetical protein 51414 7379997 Avi_9865 Agrobacterium vitis S4 hypothetical protein YP_002546524.1 51211 R 311402 CDS YP_002546525.1 222102384 7379998 51607..51993 1 NC_011986.1 hypothetical protein 51993 7379998 Avi_9866 Agrobacterium vitis S4 hypothetical protein YP_002546525.1 51607 D 311402 CDS YP_002546526.1 222102385 7379999 52116..52520 1 NC_011986.1 hypothetical protein 52520 7379999 Avi_9867 Agrobacterium vitis S4 hypothetical protein YP_002546526.1 52116 D 311402 CDS YP_002546527.1 222102386 7380000 52517..53944 1 NC_011986.1 Membrane-fusion protein 53944 7380000 Avi_9868 Agrobacterium vitis S4 Membrane-fusion protein YP_002546527.1 52517 D 311402 CDS YP_002546528.1 222102387 7380001 53941..57102 1 NC_011986.1 AcrB/AcrD/AcrF family protein 57102 7380001 Avi_9869 Agrobacterium vitis S4 AcrB/AcrD/AcrF family protein YP_002546528.1 53941 D 311402 CDS YP_002546529.1 222102388 7380002 57117..57572 1 NC_011986.1 hypothetical protein 57572 7380002 Avi_9870 Agrobacterium vitis S4 hypothetical protein YP_002546529.1 57117 D 311402 CDS YP_002546530.1 222102389 7380003 complement(57784..58347) 1 NC_011986.1 hypothetical protein 58347 7380003 Avi_9871 Agrobacterium vitis S4 hypothetical protein YP_002546530.1 57784 R 311402 CDS YP_002546531.1 222102390 7380004 complement(58507..58983) 1 NC_011986.1 hypothetical protein 58983 7380004 Avi_9872 Agrobacterium vitis S4 hypothetical protein YP_002546531.1 58507 R 311402 CDS YP_002546532.1 222102391 7380005 complement(59346..59786) 1 NC_011986.1 hypothetical protein 59786 7380005 Avi_9873 Agrobacterium vitis S4 hypothetical protein YP_002546532.1 59346 R 311402 CDS YP_002546533.1 222102392 7380006 59946..60419 1 NC_011986.1 polysaccharide inhibition protein 60419 7380006 Avi_9874 Agrobacterium vitis S4 polysaccharide inhibition protein YP_002546533.1 59946 D 311402 CDS YP_002546534.1 222102393 7380007 60578..61432 1 NC_011986.1 hypothetical protein 61432 7380007 Avi_9875 Agrobacterium vitis S4 hypothetical protein YP_002546534.1 60578 D 311402 CDS YP_002546535.1 222102394 7380008 complement(61815..62087) 1 NC_011986.1 hypothetical protein 62087 7380008 Avi_9878 Agrobacterium vitis S4 hypothetical protein YP_002546535.1 61815 R 311402 CDS YP_002546536.1 222102395 7380009 62304..62609 1 NC_011986.1 hypothetical protein 62609 7380009 Avi_9879 Agrobacterium vitis S4 hypothetical protein YP_002546536.1 62304 D 311402 CDS YP_002546537.1 222102396 7380010 63491..63730 1 NC_011986.1 hypothetical protein 63730 7380010 Avi_9881 Agrobacterium vitis S4 hypothetical protein YP_002546537.1 63491 D 311402 CDS YP_002546538.1 222102397 7380011 63730..64164 1 NC_011986.1 hypothetical protein 64164 7380011 Avi_9882 Agrobacterium vitis S4 hypothetical protein YP_002546538.1 63730 D 311402 CDS YP_002546539.1 222102398 7380012 complement(64503..64832) 1 NC_011986.1 hypothetical protein 64832 7380012 Avi_9884 Agrobacterium vitis S4 hypothetical protein YP_002546539.1 64503 R 311402 CDS YP_002546540.1 222102399 7380013 64947..66536 1 NC_011986.1 transmembrane protein 66536 7380013 Avi_9887 Agrobacterium vitis S4 transmembrane protein YP_002546540.1 64947 D 311402 CDS YP_002546541.1 222102400 7380014 66526..67527 1 NC_011986.1 hypothetical protein 67527 7380014 Avi_9888 Agrobacterium vitis S4 hypothetical protein YP_002546541.1 66526 D 311402 CDS YP_002546542.1 222102401 7380015 complement(67980..68315) 1 NC_011986.1 hypothetical protein 68315 7380015 Avi_9890 Agrobacterium vitis S4 hypothetical protein YP_002546542.1 67980 R 311402 CDS YP_002546543.1 222102402 7380016 69538..71475 1 NC_011986.1 transcriptional regulator 71475 7380016 Avi_9896 Agrobacterium vitis S4 transcriptional regulator YP_002546543.1 69538 D 311402 CDS YP_002546544.1 222102403 7380017 complement(71437..71979) 1 NC_011986.1 hypothetical protein 71979 7380017 Avi_9897 Agrobacterium vitis S4 hypothetical protein YP_002546544.1 71437 R 311402 CDS YP_002546545.1 222102404 7380018 complement(72227..73132) 1 NC_011986.1 transposase 73132 tnp 7380018 tnp Agrobacterium vitis S4 transposase YP_002546545.1 72227 R 311402 CDS YP_002546546.1 222102405 7380019 complement(73129..73458) 1 NC_011986.1 hypothetical protein 73458 7380019 Avi_9899 Agrobacterium vitis S4 hypothetical protein YP_002546546.1 73129 R 311402 CDS YP_002546547.1 222102406 7380020 73663..74943 1 NC_011986.1 replication protein C 74943 repC 7380020 repC Agrobacterium vitis S4 replication protein C YP_002546547.1 73663 D 311402 CDS YP_002546548.1 222102407 7380021 74940..75446 1 NC_011986.1 succinoglycan biosynthesis protein 75446 exoI 7380021 exoI Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002546548.1 74940 D 311402 CDS YP_002546549.1 222102408 7380022 75848..76183 1 NC_011986.1 hypothetical protein 76183 7380022 Avi_9904 Agrobacterium vitis S4 hypothetical protein YP_002546549.1 75848 D 311402 CDS YP_002546550.1 222102409 7380023 76304..76510 1 NC_011986.1 hypothetical protein 76510 7380023 Avi_9906 Agrobacterium vitis S4 hypothetical protein YP_002546550.1 76304 D 311402 CDS YP_002546551.1 222102410 7380024 76580..77644 1 NC_011986.1 cell filamentation protein 77644 7380024 Avi_9907 Agrobacterium vitis S4 cell filamentation protein YP_002546551.1 76580 D 311402 CDS YP_002546552.1 222102411 7380025 77873..78730 1 NC_011986.1 antirestriction protein 78730 ardC 7380025 ardC Agrobacterium vitis S4 antirestriction protein YP_002546552.1 77873 D 311402 CDS YP_002546919.1 222106128 7381168 287..1549 1 NC_011988.1 replication protein A 1549 repA 7381168 repA Agrobacterium vitis S4 replication protein A YP_002546919.1 287 D 311402 CDS YP_002546920.1 222106129 7381169 1546..2628 1 NC_011988.1 replication protein B 2628 repB 7381169 repB Agrobacterium vitis S4 replication protein B YP_002546920.1 1546 D 311402 CDS YP_002546921.1 222106130 7381170 3579..4796 1 NC_011988.1 replication initiation protein RepC 4796 repC 7381170 repC Agrobacterium vitis S4 replication initiation protein RepC YP_002546921.1 3579 D 311402 CDS YP_002546922.1 222106131 7381171 5079..6632 1 NC_011988.1 phospholipase/phosphatidylserine synthase 6632 7381171 Avi_5003 Agrobacterium vitis S4 phospholipase/phosphatidylserine synthase YP_002546922.1 5079 D 311402 CDS YP_002546923.1 222106132 7381172 complement(6736..7689) 1 NC_011988.1 hypothetical protein 7689 7381172 Avi_5004 Agrobacterium vitis S4 hypothetical protein YP_002546923.1 6736 R 311402 CDS YP_002546924.1 222106133 7381173 7754..8491 1 NC_011988.1 hypothetical protein 8491 7381173 Avi_5005 Agrobacterium vitis S4 hypothetical protein YP_002546924.1 7754 D 311402 CDS YP_002546925.1 222106134 7381174 complement(8635..9459) 1 NC_011988.1 hypothetical protein 9459 7381174 Avi_5006 Agrobacterium vitis S4 hypothetical protein YP_002546925.1 8635 R 311402 CDS YP_002546926.1 222106135 7381175 9913..10218 1 NC_011988.1 hypothetical protein 10218 7381175 Avi_5007 Agrobacterium vitis S4 hypothetical protein YP_002546926.1 9913 D 311402 CDS YP_002546927.1 222106136 7381176 10581..11219 1 NC_011988.1 exoD protein 11219 exoD 7381176 exoD Agrobacterium vitis S4 exoD protein YP_002546927.1 10581 D 311402 CDS YP_002546928.1 222106137 7381177 complement(11250..11717) 1 NC_011988.1 transcriptional regulator AsnC family 11717 7381177 Avi_5010 Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002546928.1 11250 R 311402 CDS YP_002546929.1 222106138 7381178 11880..12659 1 NC_011988.1 ABC transporter ATPase 12659 nocP1 7381178 nocP1 Agrobacterium vitis S4 ABC transporter ATPase YP_002546929.1 11880 D 311402 CDS YP_002546930.1 222106139 7381179 12704..13474 1 NC_011988.1 amino acid ABC transporter substrate-binding protein 13474 7381179 Avi_5014 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002546930.1 12704 D 311402 CDS YP_002546931.1 222106140 7381180 13491..14213 1 NC_011988.1 ABC transporter permease 14213 7381180 Avi_5015 Agrobacterium vitis S4 ABC transporter permease YP_002546931.1 13491 D 311402 CDS YP_002546932.1 222106141 7381181 14222..14911 1 NC_011988.1 ABC transporter permease 14911 7381181 Avi_5016 Agrobacterium vitis S4 ABC transporter permease YP_002546932.1 14222 D 311402 CDS YP_002546933.1 222106142 7381182 14929..15834 1 NC_011988.1 S-methyltransferase 15834 7381182 Avi_5017 Agrobacterium vitis S4 S-methyltransferase YP_002546933.1 14929 D 311402 CDS YP_002546934.1 222106143 7381183 complement(15844..16827) 1 NC_011988.1 Fe3+ ABC transporter permease 16827 7381183 Avi_5018 Agrobacterium vitis S4 Fe3+ ABC transporter permease YP_002546934.1 15844 R 311402 CDS YP_002546935.1 222106144 7381184 complement(16873..17832) 1 NC_011988.1 ABC transporter substrate binding protein (iron) 17832 7381184 Avi_5019 Agrobacterium vitis S4 ABC transporter substrate binding protein (iron) YP_002546935.1 16873 R 311402 CDS YP_002546936.1 222106145 7381185 complement(17855..19009) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (iron) 19009 7381185 Avi_5021 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (iron) YP_002546936.1 17855 R 311402 CDS YP_002546937.1 222106146 7381186 complement(19201..20637) 1 NC_011988.1 amidohydrolase 20637 7381186 Avi_5022 Agrobacterium vitis S4 amidohydrolase YP_002546937.1 19201 R 311402 CDS YP_002546938.1 222106147 7381187 complement(20772..21050) 1 NC_011988.1 hypothetical protein 21050 7381187 Avi_5023 Agrobacterium vitis S4 hypothetical protein YP_002546938.1 20772 R 311402 CDS YP_002546939.1 222106148 7381188 complement(21047..22552) 1 NC_011988.1 glycogen synthase 22552 glgA 7381188 glgA Agrobacterium vitis S4 glycogen synthase YP_002546939.1 21047 R 311402 CDS YP_002546940.1 222106149 7381189 complement(22624..22941) 1 NC_011988.1 hypothetical protein 22941 7381189 Avi_5025 Agrobacterium vitis S4 hypothetical protein YP_002546940.1 22624 R 311402 CDS YP_002546941.1 222106150 7381190 23186..23527 1 NC_011988.1 hypothetical protein 23527 7381190 Avi_5027 Agrobacterium vitis S4 hypothetical protein YP_002546941.1 23186 D 311402 CDS YP_002546942.1 222106151 7381191 complement(23627..24220) 1 NC_011988.1 hypothetical protein 24220 7381191 Avi_5028 Agrobacterium vitis S4 hypothetical protein YP_002546942.1 23627 R 311402 CDS YP_002546943.1 222106152 7381192 24625..25617 1 NC_011988.1 hypothetical protein 25617 7381192 Avi_5029 Agrobacterium vitis S4 hypothetical protein YP_002546943.1 24625 D 311402 CDS YP_002546944.1 222106153 7381193 complement(25671..26702) 1 NC_011988.1 zinc-binding dehydrogenase 26702 7381193 Avi_5030 Agrobacterium vitis S4 zinc-binding dehydrogenase YP_002546944.1 25671 R 311402 CDS YP_002546945.1 222106154 7381194 complement(26713..27660) 1 NC_011988.1 2-hydroxyacid dehydrogenase 27660 7381194 Avi_5031 Agrobacterium vitis S4 2-hydroxyacid dehydrogenase YP_002546945.1 26713 R 311402 CDS YP_002546946.1 222106155 7381195 27769..28527 1 NC_011988.1 catalyzes the formation of 5-dehydro-D-gluconate from D-gluconate; gluconate 5-dehydrogenase 28527 idnO 7381195 idnO Agrobacterium vitis S4 gluconate 5-dehydrogenase YP_002546946.1 27769 D 311402 CDS YP_002546947.1 222106156 7381196 28529..29032 1 NC_011988.1 gluconokinase 29032 gntK 7381196 gntK Agrobacterium vitis S4 gluconokinase YP_002546947.1 28529 D 311402 CDS YP_002546948.1 222106157 7381197 29035..29919 1 NC_011988.1 2-hydroxy-3-oxopropionate reductase 29919 garR 7381197 garR Agrobacterium vitis S4 2-hydroxy-3-oxopropionate reductase YP_002546948.1 29035 D 311402 CDS YP_002546949.1 222106158 7381198 29919..30251 1 NC_011988.1 hypothetical protein 30251 7381198 Avi_5036 Agrobacterium vitis S4 hypothetical protein YP_002546949.1 29919 D 311402 CDS YP_002546950.1 222106159 7381199 30378..31391 1 NC_011988.1 transcriptional regulator LacI family 31391 7381199 Avi_5038 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002546950.1 30378 D 311402 CDS YP_002546951.1 222106160 7381200 complement(31437..32531) 1 NC_011988.1 sugar ABC transporter substrate-binding protein 32531 7381200 Avi_5039 Agrobacterium vitis S4 sugar ABC transporter substrate-binding protein YP_002546951.1 31437 R 311402 CDS YP_002546952.1 222106161 7381201 complement(32570..33628) 1 NC_011988.1 sugar ABC transporter permease 33628 7381201 Avi_5041 Agrobacterium vitis S4 sugar ABC transporter permease YP_002546952.1 32570 R 311402 CDS YP_002546953.1 222106162 7381202 complement(33645..35141) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar) 35141 7381202 Avi_5042 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002546953.1 33645 R 311402 CDS YP_002546954.1 222106163 7381203 36674..37006 1 NC_011988.1 hypothetical protein 37006 7381203 Avi_5044 Agrobacterium vitis S4 hypothetical protein YP_002546954.1 36674 D 311402 CDS YP_002546955.1 222106164 7381204 37788..38825 1 NC_011988.1 hypothetical protein 38825 7381204 Avi_5045 Agrobacterium vitis S4 hypothetical protein YP_002546955.1 37788 D 311402 CDS YP_002546956.1 222106165 7381205 38955..39917 1 NC_011988.1 ABC transporter substrate binding protein (ribose) 39917 7381205 Avi_5046 Agrobacterium vitis S4 ABC transporter substrate binding protein (ribose) YP_002546956.1 38955 D 311402 CDS YP_002546957.1 222106166 7381206 40001..41539 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (ribose) 41539 7381206 Avi_5049 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (ribose) YP_002546957.1 40001 D 311402 CDS YP_002546958.1 222106167 7381207 41536..42576 1 NC_011988.1 ribose ABC transporter permease 42576 7381207 Avi_5050 Agrobacterium vitis S4 ribose ABC transporter permease YP_002546958.1 41536 D 311402 CDS YP_002546959.1 222106168 7381208 42573..43553 1 NC_011988.1 ribose ABC transporter permease 43553 7381208 Avi_5051 Agrobacterium vitis S4 ribose ABC transporter permease YP_002546959.1 42573 D 311402 CDS YP_002546960.1 222106169 7381209 43550..44278 1 NC_011988.1 transcriptional regulator 44278 7381209 Avi_5052 Agrobacterium vitis S4 transcriptional regulator YP_002546960.1 43550 D 311402 CDS YP_002546961.1 222106170 7381210 complement(44354..45802) 1 NC_011988.1 vanillin: NAD oxidoreductase 45802 vdh 7381210 vdh Agrobacterium vitis S4 vanillin: NAD oxidoreductase YP_002546961.1 44354 R 311402 CDS YP_002546962.1 222106171 7381211 complement(45882..47408) 1 NC_011988.1 vanillin: NAD oxidoreductase 47408 vdh 7381211 vdh Agrobacterium vitis S4 vanillin: NAD oxidoreductase YP_002546962.1 45882 R 311402 CDS YP_002546963.1 222106172 7381212 47628..48527 1 NC_011988.1 AraC family transcriptional regulator 48527 7381212 Avi_5055 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002546963.1 47628 D 311402 CDS YP_002546964.1 222106173 7381213 complement(48665..49390) 1 NC_011988.1 hypothetical protein 49390 7381213 Avi_5056 Agrobacterium vitis S4 hypothetical protein YP_002546964.1 48665 R 311402 CDS YP_002546965.1 222106174 7381214 complement(49408..51144) 1 NC_011988.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 51144 ilvD 7381214 ilvD Agrobacterium vitis S4 dihydroxy-acid dehydratase YP_002546965.1 49408 R 311402 CDS YP_002546966.1 222106175 7381215 complement(51188..52057) 1 NC_011988.1 ABC transporter permease 52057 7381215 Avi_5058 Agrobacterium vitis S4 ABC transporter permease YP_002546966.1 51188 R 311402 CDS YP_002546967.1 222106176 7381216 complement(52062..52877) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (nitrate/sulfonates) 52877 ssuB 7381216 ssuB Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (nitrate/sulfonates) YP_002546967.1 52062 R 311402 CDS YP_002546968.1 222106177 7381217 complement(53069..54052) 1 NC_011988.1 ABC transporter substrate-binding protein 54052 7381217 Avi_5060 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002546968.1 53069 R 311402 CDS YP_002546969.1 222106178 7381218 54302..55006 1 NC_011988.1 GntR family transcriptional regulator 55006 7381218 Avi_5061 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002546969.1 54302 D 311402 CDS YP_002546970.1 222106179 7381219 55427..56710 1 NC_011988.1 oxidoreductase 56710 7381219 Avi_5062 Agrobacterium vitis S4 oxidoreductase YP_002546970.1 55427 D 311402 CDS YP_002546971.1 222106180 7381220 56881..57480 1 NC_011988.1 NAD(P)H-flavin oxidoreductase 57480 7381220 Avi_5063 Agrobacterium vitis S4 NAD(P)H-flavin oxidoreductase YP_002546971.1 56881 D 311402 CDS YP_002546972.1 222106181 7381221 57596..57991 1 NC_011988.1 hypothetical protein 57991 7381221 Avi_5064 Agrobacterium vitis S4 hypothetical protein YP_002546972.1 57596 D 311402 CDS YP_002546973.1 222106182 7381222 58678..59781 1 NC_011988.1 cyclopropane-fatty-acyl-phospholipid synthase 59781 cfa 7381222 cfa Agrobacterium vitis S4 cyclopropane-fatty-acyl-phospholipid synthase YP_002546973.1 58678 D 311402 CDS YP_002546974.1 222106183 7381223 59876..61366 1 NC_011988.1 sulfate permease 61366 7381223 Avi_5067 Agrobacterium vitis S4 sulfate permease YP_002546974.1 59876 D 311402 CDS YP_002546975.1 222106184 7381224 61378..62232 1 NC_011988.1 Universal stress protein 62232 uspA 7381224 uspA Agrobacterium vitis S4 Universal stress protein YP_002546975.1 61378 D 311402 CDS YP_002546976.1 222106185 7381225 62339..63541 1 NC_011988.1 Major facilitator superfamily permease 63541 7381225 Avi_5070 Agrobacterium vitis S4 Major facilitator superfamily permease YP_002546976.1 62339 D 311402 CDS YP_002546977.1 222106186 7381226 complement(63703..65487) 1 NC_011988.1 hypothetical protein 65487 7381226 Avi_5072 Agrobacterium vitis S4 hypothetical protein YP_002546977.1 63703 R 311402 CDS YP_002546978.1 222106187 7381227 complement(65889..66572) 1 NC_011988.1 TetR family transcriptional regulator 66572 7381227 Avi_5073 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002546978.1 65889 R 311402 CDS YP_002546979.1 222106188 7381228 66801..68207 1 NC_011988.1 oxidoreductase 68207 7381228 Avi_5074 Agrobacterium vitis S4 oxidoreductase YP_002546979.1 66801 D 311402 CDS YP_002546980.1 222106189 7381229 68212..68739 1 NC_011988.1 hypothetical protein 68739 7381229 Avi_5075 Agrobacterium vitis S4 hypothetical protein YP_002546980.1 68212 D 311402 CDS YP_002546981.1 222106190 7381230 69066..70604 1 NC_011988.1 major facilitator superfamily permease 70604 7381230 Avi_5076 Agrobacterium vitis S4 major facilitator superfamily permease YP_002546981.1 69066 D 311402 CDS YP_002546982.1 222106191 7381231 70629..71237 1 NC_011988.1 nitrilotriacetate monooxygenase 71237 7381231 Avi_5077 Agrobacterium vitis S4 nitrilotriacetate monooxygenase YP_002546982.1 70629 D 311402 CDS YP_002546983.1 222106192 7381232 71280..72179 1 NC_011988.1 oxidoreductase 72179 7381232 Avi_5079 Agrobacterium vitis S4 oxidoreductase YP_002546983.1 71280 D 311402 CDS YP_002546984.1 222106193 7381233 72997..74346 1 NC_011988.1 Carbohydrate-selective porin 74346 7381233 Avi_5080 Agrobacterium vitis S4 Carbohydrate-selective porin YP_002546984.1 72997 D 311402 CDS YP_002546985.1 222106194 7381234 74593..75489 1 NC_011988.1 hypothetical protein 75489 7381234 Avi_5081 Agrobacterium vitis S4 hypothetical protein YP_002546985.1 74593 D 311402 CDS YP_002546986.1 222106195 7381235 75500..76354 1 NC_011988.1 2-hydroxyhepta-24-diene-1 76354 7381235 Avi_5082 Agrobacterium vitis S4 2-hydroxyhepta-24-diene-1 YP_002546986.1 75500 D 311402 CDS YP_002546987.1 222106196 7381236 76833..77324 1 NC_011988.1 CMP/dCMP deaminase zinc-binding 77324 7381236 Avi_5084 Agrobacterium vitis S4 CMP/dCMP deaminase zinc-binding YP_002546987.1 76833 D 311402 CDS YP_002546988.1 222106197 7381237 complement(77346..78086) 1 NC_011988.1 GntR family transcriptional regulator 78086 7381237 Avi_5085 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002546988.1 77346 R 311402 CDS YP_002546989.1 222106198 7380899 78435..79988 1 NC_011988.1 ABC transporter substrate binding protein (dipeptide) 79988 7380899 Avi_5086 Agrobacterium vitis S4 ABC transporter substrate binding protein (dipeptide) YP_002546989.1 78435 D 311402 CDS YP_002546990.1 222106199 7380900 79990..81351 1 NC_011988.1 beta-glucosidase 81351 bgl 7380900 bgl Agrobacterium vitis S4 beta-glucosidase YP_002546990.1 79990 D 311402 CDS YP_002546991.1 222106200 7380901 81376..82317 1 NC_011988.1 peptide ABC transporter permease 82317 7380901 Avi_5088 Agrobacterium vitis S4 peptide ABC transporter permease YP_002546991.1 81376 D 311402 CDS YP_002546992.1 222106201 7380902 82317..83198 1 NC_011988.1 peptide ABC transporter permease 83198 7380902 Avi_5089 Agrobacterium vitis S4 peptide ABC transporter permease YP_002546992.1 82317 D 311402 CDS YP_002546993.1 222106202 7380903 83201..84412 1 NC_011988.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 84412 7380903 Avi_5090 Agrobacterium vitis S4 dihydroorotase YP_002546993.1 83201 D 311402 CDS YP_002546994.1 222106203 7380904 84452..84943 1 NC_011988.1 hypothetical protein 84943 7380904 Avi_5091 Agrobacterium vitis S4 hypothetical protein YP_002546994.1 84452 D 311402 CDS YP_002546995.1 222106204 7380905 complement(84955..85782) 1 NC_011988.1 transcriptional regulator 85782 7380905 Avi_5093 Agrobacterium vitis S4 transcriptional regulator YP_002546995.1 84955 R 311402 CDS YP_002546996.1 222106205 7380906 85879..87075 1 NC_011988.1 L-seryl-tRNA(ser) selenium transferase 87075 selA 7380906 selA Agrobacterium vitis S4 L-seryl-tRNA(ser) selenium transferase YP_002546996.1 85879 D 311402 CDS YP_002546997.1 222106206 7380907 87500..89038 1 NC_011988.1 GGDEF family protein 89038 7380907 Avi_5096 Agrobacterium vitis S4 GGDEF family protein YP_002546997.1 87500 D 311402 CDS YP_002546998.1 222106207 7380908 89305..90198 1 NC_011988.1 hypothetical protein 90198 7380908 Avi_5097 Agrobacterium vitis S4 hypothetical protein YP_002546998.1 89305 D 311402 CDS YP_002546999.1 222106208 7380909 90294..91097 1 NC_011988.1 Transglutaminase domain-containing protein 91097 7380909 Avi_5101 Agrobacterium vitis S4 Transglutaminase domain-containing protein YP_002546999.1 90294 D 311402 CDS YP_002547000.1 222106209 7380910 91405..92076 1 NC_011988.1 Permeases of the major facilitator superfamily 92076 7380910 Avi_5102 Agrobacterium vitis S4 Permeases of the major facilitator superfamily YP_002547000.1 91405 D 311402 CDS YP_002547001.1 222106210 7380911 92361..92999 1 NC_011988.1 oxidoreductase with iron-sulfur subunit 92999 7380911 Avi_5103 Agrobacterium vitis S4 oxidoreductase with iron-sulfur subunit YP_002547001.1 92361 D 311402 CDS YP_002547002.1 222106211 7380912 92996..93946 1 NC_011988.1 oxidoreductase 93946 7380912 Avi_5106 Agrobacterium vitis S4 oxidoreductase YP_002547002.1 92996 D 311402 CDS YP_002547003.1 222106212 7380913 93950..96148 1 NC_011988.1 dehydrogenase 96148 7380913 Avi_5107 Agrobacterium vitis S4 dehydrogenase YP_002547003.1 93950 D 311402 CDS YP_002547004.1 222106213 7380914 96470..98164 1 NC_011988.1 two-component sensor 98164 7380914 Avi_5108 Agrobacterium vitis S4 two-component sensor YP_002547004.1 96470 D 311402 CDS YP_002547005.1 222106214 7380915 98265..99164 1 NC_011988.1 LysR family transcriptional regulator 99164 7380915 Avi_5109 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547005.1 98265 D 311402 CDS YP_002547006.1 222106215 7380916 complement(99220..99906) 1 NC_011988.1 hypothetical protein 99906 7380916 Avi_5111 Agrobacterium vitis S4 hypothetical protein YP_002547006.1 99220 R 311402 CDS YP_002547007.1 222106216 7380917 complement(100041..101228) 1 NC_011988.1 non-heme haloperoxidase 101228 7380917 Avi_5112 Agrobacterium vitis S4 non-heme haloperoxidase YP_002547007.1 100041 R 311402 CDS YP_002547008.1 222106217 7380918 complement(101290..101853) 1 NC_011988.1 3-oxoacyl-ACP reductase 101853 fabG 7380918 fabG Agrobacterium vitis S4 3-oxoacyl-ACP reductase YP_002547008.1 101290 R 311402 CDS YP_002547009.1 222106218 7380919 102248..102733 1 NC_011988.1 activates RNA polymerase to cleave back-tracked RNA during elongational pausing; transcription elongation factor regulatory protein 102733 greB 7380919 greB Agrobacterium vitis S4 transcription elongation factor regulatory protein YP_002547009.1 102248 D 311402 CDS YP_002547010.1 222106219 7380920 complement(102879..104240) 1 NC_011988.1 alpha-galactosidase 104240 melA 7380920 melA Agrobacterium vitis S4 alpha-galactosidase YP_002547010.1 102879 R 311402 CDS YP_002547011.1 222106220 7380921 complement(104266..105933) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 105933 7380921 Avi_5116 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547011.1 104266 R 311402 CDS YP_002547012.1 222106221 7380922 complement(105946..107067) 1 NC_011988.1 peptide ABC transporter permease 107067 7380922 Avi_5117 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547012.1 105946 R 311402 CDS YP_002547013.1 222106222 7380923 complement(107064..108077) 1 NC_011988.1 peptide ABC transporter permease 108077 7380923 Avi_5118 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547013.1 107064 R 311402 CDS YP_002547014.1 222106223 7380924 complement(108151..110238) 1 NC_011988.1 ABC transporter substrate binding protein (alpha-galactoside) 110238 agpA 7380924 agpA Agrobacterium vitis S4 ABC transporter substrate binding protein (alpha-galactoside) YP_002547014.1 108151 R 311402 CDS YP_002547015.1 222106224 7380925 complement(110353..111825) 1 NC_011988.1 alpha-galactosidase 111825 melA 7380925 melA Agrobacterium vitis S4 alpha-galactosidase YP_002547015.1 110353 R 311402 CDS YP_002547016.1 222106225 7380926 112016..112960 1 NC_011988.1 AraC family transcriptional regulator 112960 agpT 7380926 agpT Agrobacterium vitis S4 AraC family transcriptional regulator YP_002547016.1 112016 D 311402 CDS YP_002547017.1 222106226 7380927 complement(113066..113461) 1 NC_011988.1 hypothetical protein 113461 7380927 Avi_5123 Agrobacterium vitis S4 hypothetical protein YP_002547017.1 113066 R 311402 CDS YP_002547018.1 222106227 7380928 complement(113531..114028) 1 NC_011988.1 hypothetical protein 114028 7380928 Avi_5124 Agrobacterium vitis S4 hypothetical protein YP_002547018.1 113531 R 311402 CDS YP_002547019.1 222106228 7380929 114274..114942 1 NC_011988.1 two component response regulator 114942 phoP 7380929 phoP Agrobacterium vitis S4 two component response regulator YP_002547019.1 114274 D 311402 CDS YP_002547020.1 222106229 7380930 114939..116309 1 NC_011988.1 two component sensor kinase 116309 phoQ 7380930 phoQ Agrobacterium vitis S4 two component sensor kinase YP_002547020.1 114939 D 311402 CDS YP_002547021.1 222106230 7380931 116429..117037 1 NC_011988.1 molecular chaperone DnaJ family 117037 7380931 Avi_5127 Agrobacterium vitis S4 molecular chaperone DnaJ family YP_002547021.1 116429 D 311402 CDS YP_002547022.1 222106231 7380932 complement(117104..118117) 1 NC_011988.1 zinc-binding dehydrogenase 118117 7380932 Avi_5128 Agrobacterium vitis S4 zinc-binding dehydrogenase YP_002547022.1 117104 R 311402 CDS YP_002547023.1 222106232 7380933 complement(118171..119460) 1 NC_011988.1 hypothetical protein 119460 7380933 Avi_5129 Agrobacterium vitis S4 hypothetical protein YP_002547023.1 118171 R 311402 CDS YP_002547024.1 222106233 7380934 complement(119703..120515) 1 NC_011988.1 hypothetical protein 120515 7380934 Avi_5130 Agrobacterium vitis S4 hypothetical protein YP_002547024.1 119703 R 311402 CDS YP_002547025.1 222106234 7380935 complement(120518..121522) 1 NC_011988.1 oxidoreductase 121522 7380935 Avi_5131 Agrobacterium vitis S4 oxidoreductase YP_002547025.1 120518 R 311402 CDS YP_002547026.1 222106235 7380936 complement(121592..122533) 1 NC_011988.1 ABC transporter substrate binding protein (ribose) 122533 rbsB 7380936 rbsB Agrobacterium vitis S4 ABC transporter substrate binding protein (ribose) YP_002547026.1 121592 R 311402 CDS YP_002547027.1 222106236 7380937 complement(122632..123681) 1 NC_011988.1 ribose ABC transporter permease 123681 rbsC 7380937 rbsC Agrobacterium vitis S4 ribose ABC transporter permease YP_002547027.1 122632 R 311402 CDS YP_002547028.1 222106237 7380938 complement(123674..125248) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (ribose) 125248 rbsA 7380938 rbsA Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (ribose) YP_002547028.1 123674 R 311402 CDS YP_002547029.1 222106238 7380939 125415..126086 1 NC_011988.1 GntR family transcriptional regulator 126086 7380939 Avi_5136 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547029.1 125415 D 311402 CDS YP_002547030.1 222106239 7380940 126281..127582 1 NC_011988.1 extracellular solute-binding protein 127582 7380940 Avi_5137 Agrobacterium vitis S4 extracellular solute-binding protein YP_002547030.1 126281 D 311402 CDS YP_002547031.1 222106240 7380941 127678..128505 1 NC_011988.1 maltose ABC transporter permease 128505 malF 7380941 malF Agrobacterium vitis S4 maltose ABC transporter permease YP_002547031.1 127678 D 311402 CDS YP_002547032.1 222106241 7380942 128502..129326 1 NC_011988.1 ABC transporter permease 129326 aglG 7380942 aglG Agrobacterium vitis S4 ABC transporter permease YP_002547032.1 128502 D 311402 CDS YP_002547033.1 222106242 7380943 129387..130469 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar) 130469 7380943 Avi_5140 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002547033.1 129387 D 311402 CDS YP_002547034.1 222106243 7380944 130508..132733 1 NC_011988.1 hypothetical protein 132733 7380944 Avi_5141 Agrobacterium vitis S4 hypothetical protein YP_002547034.1 130508 D 311402 CDS YP_002547035.1 222106244 7380945 132809..134881 1 NC_011988.1 hypothetical protein 134881 7380945 Avi_5142 Agrobacterium vitis S4 hypothetical protein YP_002547035.1 132809 D 311402 CDS YP_002547036.1 222106245 7380946 134941..135972 1 NC_011988.1 transcriptional regulator LacI family 135972 7380946 Avi_5143 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002547036.1 134941 D 311402 CDS YP_002547037.1 222106246 7380947 136830..137720 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (branched chain amino acid) 137720 7380947 Avi_5146 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (branched chain amino acid) YP_002547037.1 136830 D 311402 CDS YP_002547038.1 222106247 7380948 137717..138616 1 NC_011988.1 branched-chain amino acid ABC transporter permease 138616 7380948 Avi_5147 Agrobacterium vitis S4 branched-chain amino acid ABC transporter permease YP_002547038.1 137717 D 311402 CDS YP_002547039.1 222106248 7380949 138620..139675 1 NC_011988.1 branched-chain amino acid ABC transporter permease 139675 7380949 Avi_5148 Agrobacterium vitis S4 branched-chain amino acid ABC transporter permease YP_002547039.1 138620 D 311402 CDS YP_002547040.1 222106249 7380950 139777..141111 1 NC_011988.1 hypothetical protein 141111 7380950 Avi_5149 Agrobacterium vitis S4 hypothetical protein YP_002547040.1 139777 D 311402 CDS YP_002547041.1 222106250 7380951 141303..142076 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (branched chain amino acid) 142076 7380951 Avi_5150 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (branched chain amino acid) YP_002547041.1 141303 D 311402 CDS YP_002547042.1 222106251 7380952 complement(142294..144624) 1 NC_011988.1 methyl-accepting chemotaxis protein 144624 mcpC 7380952 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002547042.1 142294 R 311402 CDS YP_002547043.1 222106252 7380953 144962..146326 1 NC_011988.1 nitrilotriacetate monooxygenase 146326 7380953 Avi_5152 Agrobacterium vitis S4 nitrilotriacetate monooxygenase YP_002547043.1 144962 D 311402 CDS YP_002547044.1 222106253 7380954 146569..147972 1 NC_011988.1 nitrilotriacetate monooxygenase 147972 7380954 Avi_5154 Agrobacterium vitis S4 nitrilotriacetate monooxygenase YP_002547044.1 146569 D 311402 CDS YP_002547045.1 222106254 7380955 148007..149275 1 NC_011988.1 acyl-CoA dehydrogenase 149275 acd 7380955 acd Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002547045.1 148007 D 311402 CDS YP_002547046.1 222106255 7380956 149297..150559 1 NC_011988.1 acyl-CoA dehydrogenase 150559 acd 7380956 acd Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002547046.1 149297 D 311402 CDS YP_002547047.1 222106256 7380957 150631..151674 1 NC_011988.1 hypothetical protein 151674 7380957 Avi_5157 Agrobacterium vitis S4 hypothetical protein YP_002547047.1 150631 D 311402 CDS YP_002547048.1 222106257 7380958 complement(151739..152992) 1 NC_011988.1 hypothetical protein 152992 7380958 Avi_5158 Agrobacterium vitis S4 hypothetical protein YP_002547048.1 151739 R 311402 CDS YP_002547049.1 222106258 7380959 complement(153026..154069) 1 NC_011988.1 ABC transporter binding protein 154069 7380959 Avi_5159 Agrobacterium vitis S4 ABC transporter binding protein YP_002547049.1 153026 R 311402 CDS YP_002547050.1 222106259 7380960 complement(154101..155147) 1 NC_011988.1 ribose ABC transporter permease 155147 rbsC 7380960 rbsC Agrobacterium vitis S4 ribose ABC transporter permease YP_002547050.1 154101 R 311402 CDS YP_002547051.1 222106260 7380961 complement(155147..156628) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (ribose) 156628 rbsA 7380961 rbsA Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (ribose) YP_002547051.1 155147 R 311402 CDS YP_002547052.1 222106261 7380962 156998..158044 1 NC_011988.1 ABC transporter binding protein 158044 7380962 Avi_5162 Agrobacterium vitis S4 ABC transporter binding protein YP_002547052.1 156998 D 311402 CDS YP_002547053.1 222106262 7380963 complement(158120..159442) 1 NC_011988.1 O-acetylhomoserine sulfhydrylase 159442 7380963 Avi_5163 Agrobacterium vitis S4 O-acetylhomoserine sulfhydrylase YP_002547053.1 158120 R 311402 CDS YP_002547054.1 222106263 7380964 159786..160799 1 NC_011988.1 ABC transporter substrate binding protein (ribose) 160799 rbsB 7380964 rbsB Agrobacterium vitis S4 ABC transporter substrate binding protein (ribose) YP_002547054.1 159786 D 311402 CDS YP_002547055.1 222106264 7380965 160872..162425 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (ribose) 162425 rbsA 7380965 rbsA Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (ribose) YP_002547055.1 160872 D 311402 CDS YP_002547056.1 222106265 7380966 162415..163464 1 NC_011988.1 ribose ABC transporter permease 163464 rbsC 7380966 rbsC Agrobacterium vitis S4 ribose ABC transporter permease YP_002547056.1 162415 D 311402 CDS YP_002547057.1 222106266 7380967 163472..164473 1 NC_011988.1 sugar ABC transporter permease 164473 7380967 Avi_5169 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547057.1 163472 D 311402 CDS YP_002547058.1 222106267 7380968 164714..165550 1 NC_011988.1 amino acid ABC transporter substrate-binding protein 165550 7380968 Avi_5170 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002547058.1 164714 D 311402 CDS YP_002547059.1 222106268 7380969 165712..166458 1 NC_011988.1 amino acid ABC transporter permease 166458 7380969 Avi_5171 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002547059.1 165712 D 311402 CDS YP_002547060.1 222106269 7380970 166455..167237 1 NC_011988.1 amino acid ABC transporter permease 167237 7380970 Avi_5172 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002547060.1 166455 D 311402 CDS YP_002547061.1 222106270 7380971 167250..168035 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (amino acid) 168035 7380971 Avi_5173 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (amino acid) YP_002547061.1 167250 D 311402 CDS YP_002547062.1 222106271 7380972 168044..169405 1 NC_011988.1 hypothetical protein 169405 7380972 Avi_5175 Agrobacterium vitis S4 hypothetical protein YP_002547062.1 168044 D 311402 CDS YP_002547063.1 222106272 7380973 169438..170727 1 NC_011988.1 monooxygenase 170727 7380973 Avi_5176 Agrobacterium vitis S4 monooxygenase YP_002547063.1 169438 D 311402 CDS YP_002547064.1 222106273 7380974 complement(170735..171736) 1 NC_011988.1 Ketopantoate reductase 171736 7380974 Avi_5177 Agrobacterium vitis S4 Ketopantoate reductase YP_002547064.1 170735 R 311402 CDS YP_002547065.1 222106274 7380975 complement(171736..172917) 1 NC_011988.1 acyl-CoA dehydrogenase-related protein 172917 7380975 Avi_5178 Agrobacterium vitis S4 acyl-CoA dehydrogenase-related protein YP_002547065.1 171736 R 311402 CDS YP_002547066.1 222106275 7380976 complement(173070..174173) 1 NC_011988.1 sulfonate monooxygenase 174173 ssuD 7380976 ssuD Agrobacterium vitis S4 sulfonate monooxygenase YP_002547066.1 173070 R 311402 CDS YP_002547067.1 222106276 7380977 complement(174340..175425) 1 NC_011988.1 monooxygenase 175425 7380977 Avi_5180 Agrobacterium vitis S4 monooxygenase YP_002547067.1 174340 R 311402 CDS YP_002547068.1 222106277 7380978 complement(175422..177158) 1 NC_011988.1 ABC transporter ATPase 177158 moaD 7380978 moaD Agrobacterium vitis S4 ABC transporter ATPase YP_002547068.1 175422 R 311402 CDS YP_002547069.1 222106278 7380979 complement(177137..177985) 1 NC_011988.1 peptide ABC transporter permease 177985 dppC 7380979 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002547069.1 177137 R 311402 CDS YP_002547070.1 222106279 7380980 complement(177982..178992) 1 NC_011988.1 peptide ABC transporter permease 178992 7380980 Avi_5183 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547070.1 177982 R 311402 CDS YP_002547071.1 222106280 7381321 complement(179017..180669) 1 NC_011988.1 ABC-type transporter substrate binding protein 180669 7381321 Avi_5184 Agrobacterium vitis S4 ABC-type transporter substrate binding protein YP_002547071.1 179017 R 311402 CDS YP_002547072.1 222106281 7381322 181293..184463 1 NC_011988.1 outer membrane autotransporter 184463 7381322 Avi_5186 Agrobacterium vitis S4 outer membrane autotransporter YP_002547072.1 181293 D 311402 CDS YP_002547073.1 222106282 7381323 184463..184990 1 NC_011988.1 Invasion protein B 184990 invB 7381323 invB Agrobacterium vitis S4 Invasion protein B YP_002547073.1 184463 D 311402 CDS YP_002547074.1 222106283 7381324 185225..185887 1 NC_011988.1 two component response regulator 185887 7381324 Avi_5188 Agrobacterium vitis S4 two component response regulator YP_002547074.1 185225 D 311402 CDS YP_002547075.1 222106284 7381325 complement(185858..187477) 1 NC_011988.1 Signal transduction histidine kinase 187477 7381325 Avi_5189 Agrobacterium vitis S4 Signal transduction histidine kinase YP_002547075.1 185858 R 311402 CDS YP_002547076.1 222106285 7381326 complement(187946..190129) 1 NC_011988.1 catalase 190129 katA 7381326 katA Agrobacterium vitis S4 catalase YP_002547076.1 187946 R 311402 CDS YP_002547077.1 222106286 7381327 complement(190980..191459) 1 NC_011988.1 hypothetical protein 191459 7381327 Avi_5192 Agrobacterium vitis S4 hypothetical protein YP_002547077.1 190980 R 311402 CDS YP_002547078.1 222106287 7381328 complement(191548..192489) 1 NC_011988.1 dihydrodipicolinate synthase 192489 dapA 7381328 dapA Agrobacterium vitis S4 dihydrodipicolinate synthase YP_002547078.1 191548 R 311402 CDS YP_002547079.1 222106288 7381329 complement(192570..193880) 1 NC_011988.1 Permeases of the major facilitator superfamily 193880 7381329 Avi_5194 Agrobacterium vitis S4 Permeases of the major facilitator superfamily YP_002547079.1 192570 R 311402 CDS YP_002547080.1 222106289 7381330 194252..195328 1 NC_011988.1 transcriptional regulator LacI family 195328 7381330 Avi_5195 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002547080.1 194252 D 311402 CDS YP_002547081.1 222106290 7381331 195955..196950 1 NC_011988.1 hypothetical protein 196950 7381331 Avi_5196 Agrobacterium vitis S4 hypothetical protein YP_002547081.1 195955 D 311402 CDS YP_002547082.1 222106291 7381332 197025..198317 1 NC_011988.1 monooxygenase 198317 7381332 Avi_5198 Agrobacterium vitis S4 monooxygenase YP_002547082.1 197025 D 311402 CDS YP_002547083.1 222106292 7381333 198440..199651 1 NC_011988.1 hippurate hydrolase 199651 7381333 Avi_5199 Agrobacterium vitis S4 hippurate hydrolase YP_002547083.1 198440 D 311402 CDS YP_002547084.1 222106293 7381334 199667..200209 1 NC_011988.1 acetyltransferase 200209 7381334 Avi_5200 Agrobacterium vitis S4 acetyltransferase YP_002547084.1 199667 D 311402 CDS YP_002547085.1 222106294 7381336 202072..203010 1 NC_011988.1 ABC transporter substrate-binding protein 203010 7381336 Avi_5205 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002547085.1 202072 D 311402 CDS YP_002547086.1 222106295 7381337 203068..204003 1 NC_011988.1 ABC transporter substrate-binding protein 204003 7381337 Avi_5206 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002547086.1 203068 D 311402 CDS YP_002547087.1 222106296 7381338 204047..205126 1 NC_011988.1 monooxygenase 205126 7381338 Avi_5208 Agrobacterium vitis S4 monooxygenase YP_002547087.1 204047 D 311402 CDS YP_002547088.1 222106297 7381339 complement(205200..206522) 1 NC_011988.1 two component sensor kinase 206522 envZ 7381339 envZ Agrobacterium vitis S4 two component sensor kinase YP_002547088.1 205200 R 311402 CDS YP_002547089.1 222106298 7381340 complement(206515..207240) 1 NC_011988.1 two component response regulator 207240 petR 7381340 petR Agrobacterium vitis S4 two component response regulator YP_002547089.1 206515 R 311402 CDS YP_002547090.1 222106299 7381341 207483..208559 1 NC_011988.1 HlyD family secretion protein 208559 7381341 Avi_5211 Agrobacterium vitis S4 HlyD family secretion protein YP_002547090.1 207483 D 311402 CDS YP_002547091.1 222106300 7381342 208556..211660 1 NC_011988.1 AcrB/AcrD/AcrF family protein 211660 7381342 Avi_5212 Agrobacterium vitis S4 AcrB/AcrD/AcrF family protein YP_002547091.1 208556 D 311402 CDS YP_002547092.1 222106301 7381343 211816..212613 1 NC_011988.1 hypothetical protein 212613 7381343 Avi_5213 Agrobacterium vitis S4 hypothetical protein YP_002547092.1 211816 D 311402 CDS YP_002547093.1 222106302 7381344 complement(212692..213627) 1 NC_011988.1 AraC family transcriptional regulator 213627 7381344 Avi_5215 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002547093.1 212692 R 311402 CDS YP_002547094.1 222106303 7381345 213879..215264 1 NC_011988.1 nitrilotriacetate monooxygenase 215264 7381345 Avi_5216 Agrobacterium vitis S4 nitrilotriacetate monooxygenase YP_002547094.1 213879 D 311402 CDS YP_002547095.1 222106304 7381346 215384..215833 1 NC_011988.1 flavoprotein oxidoreductase 215833 7381346 Avi_5217 Agrobacterium vitis S4 flavoprotein oxidoreductase YP_002547095.1 215384 D 311402 CDS YP_002547096.1 222106305 7381347 complement(216095..217585) 1 NC_011988.1 Permeases of the major facilitator superfamily 217585 7381347 Avi_5218 Agrobacterium vitis S4 Permeases of the major facilitator superfamily YP_002547096.1 216095 R 311402 CDS YP_002547097.1 222106306 7381348 complement(217671..218972) 1 NC_011988.1 oxidoreductase 218972 7381348 Avi_5219 Agrobacterium vitis S4 oxidoreductase YP_002547097.1 217671 R 311402 CDS YP_002547098.1 222106307 7381349 complement(219306..219827) 1 NC_011988.1 hypothetical protein 219827 7381349 Avi_5221 Agrobacterium vitis S4 hypothetical protein YP_002547098.1 219306 R 311402 CDS YP_002547099.1 222106308 7381350 complement(220317..220856) 1 NC_011988.1 transcriptional regulator 220856 7381350 Avi_5222 Agrobacterium vitis S4 transcriptional regulator YP_002547099.1 220317 R 311402 CDS YP_002547100.1 222106309 7381351 221145..222434 1 NC_011988.1 oxidoreductase 222434 7381351 Avi_5223 Agrobacterium vitis S4 oxidoreductase YP_002547100.1 221145 D 311402 CDS YP_002547101.1 222106310 7381352 222434..223600 1 NC_011988.1 hypothetical protein 223600 7381352 Avi_5224 Agrobacterium vitis S4 hypothetical protein YP_002547101.1 222434 D 311402 CDS YP_002547102.1 222106311 7381353 complement(223660..224841) 1 NC_011988.1 long-chain fatty acid transport protein 224841 fadL 7381353 fadL Agrobacterium vitis S4 long-chain fatty acid transport protein YP_002547102.1 223660 R 311402 CDS YP_002547103.1 222106312 7381354 complement(225377..226816) 1 NC_011988.1 aldehyde dehydrogenase 226816 7381354 Avi_5226 Agrobacterium vitis S4 aldehyde dehydrogenase YP_002547103.1 225377 R 311402 CDS YP_002547104.1 222106313 7381355 complement(226820..227971) 1 NC_011988.1 MFS permease 227971 7381355 Avi_5227 Agrobacterium vitis S4 MFS permease YP_002547104.1 226820 R 311402 CDS YP_002547105.1 222106314 7381356 228408..229439 1 NC_011988.1 AraC family transcriptional regulator 229439 7381356 Avi_5228 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002547105.1 228408 D 311402 CDS YP_002547106.1 222106315 7381357 229570..231168 1 NC_011988.1 xylulose kinase 231168 7381357 Avi_5229 Agrobacterium vitis S4 xylulose kinase YP_002547106.1 229570 D 311402 CDS YP_002547107.1 222106316 7381358 231161..231814 1 NC_011988.1 L-fuculose-phosphate aldolase 231814 7381358 Avi_5230 Agrobacterium vitis S4 L-fuculose-phosphate aldolase YP_002547107.1 231161 D 311402 CDS YP_002547108.1 222106317 7381359 231816..233276 1 NC_011988.1 glutamate-1-semialdehyde aminotransferase 233276 atrB 7381359 atrB Agrobacterium vitis S4 glutamate-1-semialdehyde aminotransferase YP_002547108.1 231816 D 311402 CDS YP_002547109.1 222106318 7381360 233284..233967 1 NC_011988.1 hypothetical protein 233967 7381360 Avi_5232 Agrobacterium vitis S4 hypothetical protein YP_002547109.1 233284 D 311402 CDS YP_002547110.1 222106319 7381361 234179..235228 1 NC_011988.1 hypothetical protein 235228 7381361 Avi_5234 Agrobacterium vitis S4 hypothetical protein YP_002547110.1 234179 D 311402 CDS YP_002547111.1 222106320 7381362 235257..236084 1 NC_011988.1 oxidoreductase 236084 7381362 Avi_5235 Agrobacterium vitis S4 oxidoreductase YP_002547111.1 235257 D 311402 CDS YP_002547112.1 222106321 7381363 236171..236833 1 NC_011988.1 hypothetical protein 236833 7381363 Avi_5237 Agrobacterium vitis S4 hypothetical protein YP_002547112.1 236171 D 311402 CDS YP_002547113.1 222106322 7381364 complement(236944..238167) 1 NC_011988.1 hypothetical protein 238167 7381364 Avi_5238 Agrobacterium vitis S4 hypothetical protein YP_002547113.1 236944 R 311402 CDS YP_002547114.1 222106323 7381365 complement(238171..239745) 1 NC_011988.1 hypothetical protein 239745 7381365 Avi_5240 Agrobacterium vitis S4 hypothetical protein YP_002547114.1 238171 R 311402 CDS YP_002547115.1 222106324 7381366 complement(239822..240271) 1 NC_011988.1 hypothetical protein 240271 7381366 Avi_5241 Agrobacterium vitis S4 hypothetical protein YP_002547115.1 239822 R 311402 CDS YP_002547116.1 222106325 7381367 complement(240268..240705) 1 NC_011988.1 hypothetical protein 240705 7381367 Avi_5242 Agrobacterium vitis S4 hypothetical protein YP_002547116.1 240268 R 311402 CDS YP_002547117.1 222106326 7381368 complement(240698..241276) 1 NC_011988.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 241276 sigW 7381368 sigW Agrobacterium vitis S4 RNA polymerase sigma factor YP_002547117.1 240698 R 311402 CDS YP_002547118.1 222106327 7381369 complement(241574..241969) 1 NC_011988.1 alkylphosphonate uptake protein 241969 phnA 7381369 phnA Agrobacterium vitis S4 alkylphosphonate uptake protein YP_002547118.1 241574 R 311402 CDS YP_002547119.1 222106328 7381370 242212..244641 1 NC_011988.1 pyrroloquinoline-quinone-dependent quinate dehydrogenase 244641 7381370 Avi_5248 Agrobacterium vitis S4 pyrroloquinoline-quinone-dependent quinate dehydrogenase YP_002547119.1 242212 D 311402 CDS YP_002547120.1 222106329 7381371 complement(244751..245893) 1 NC_011988.1 transcriptional regulator ROK family 245893 7381371 Avi_5249 Agrobacterium vitis S4 transcriptional regulator ROK family YP_002547120.1 244751 R 311402 CDS YP_002547121.1 222106330 7381372 245990..247363 1 NC_011988.1 ABC transporter substrate binding protein (sugar) 247363 7381372 Avi_5250 Agrobacterium vitis S4 ABC transporter substrate binding protein (sugar) YP_002547121.1 245990 D 311402 CDS YP_002547122.1 222106331 7381373 247433..248344 1 NC_011988.1 sugar ABC transporter permease 248344 7381373 Avi_5252 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547122.1 247433 D 311402 CDS YP_002547123.1 222106332 7381374 248344..249408 1 NC_011988.1 sugar ABC transporter permease 249408 7381374 Avi_5253 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547123.1 248344 D 311402 CDS YP_002547124.1 222106333 7381375 249414..250526 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar) 250526 7381375 Avi_5254 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002547124.1 249414 D 311402 CDS YP_002547125.1 222106334 7381376 250539..251261 1 NC_011988.1 glycerophosphodiester phosphodiesterase 251261 ugpQ 7381376 ugpQ Agrobacterium vitis S4 glycerophosphodiester phosphodiesterase YP_002547125.1 250539 D 311402 CDS YP_002547126.1 222106335 7381377 251366..252814 1 NC_011988.1 hypothetical protein 252814 7381377 Avi_5256 Agrobacterium vitis S4 hypothetical protein YP_002547126.1 251366 D 311402 CDS YP_002547127.1 222106336 7381378 complement(252873..253247) 1 NC_011988.1 acetyltransferase 253247 7381378 Avi_5257 Agrobacterium vitis S4 acetyltransferase YP_002547127.1 252873 R 311402 CDS YP_002547128.1 222106337 7381379 complement(253450..253761) 1 NC_011988.1 hypothetical protein 253761 7381379 Avi_5258 Agrobacterium vitis S4 hypothetical protein YP_002547128.1 253450 R 311402 CDS YP_002547129.1 222106338 7381380 complement(253758..254432) 1 NC_011988.1 hypothetical protein 254432 7381380 Avi_5259 Agrobacterium vitis S4 hypothetical protein YP_002547129.1 253758 R 311402 CDS YP_002547130.1 222106339 7381381 254829..260468 1 NC_011988.1 hypothetical protein 260468 7381381 Avi_5260 Agrobacterium vitis S4 hypothetical protein YP_002547130.1 254829 D 311402 CDS YP_002547131.1 222106340 7381382 260885..262903 1 NC_011988.1 Valyl-tRNA synthetase 262903 7381382 Avi_5261 Agrobacterium vitis S4 Valyl-tRNA synthetase YP_002547131.1 260885 D 311402 CDS YP_002547132.1 222106341 7381383 262944..264044 1 NC_011988.1 hypothetical protein 264044 7381383 Avi_5262 Agrobacterium vitis S4 hypothetical protein YP_002547132.1 262944 D 311402 CDS YP_002547133.1 222106342 7381384 complement(264063..264431) 1 NC_011988.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit G 264431 phaG 7381384 phaG Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit G YP_002547133.1 264063 R 311402 CDS YP_002547134.1 222106343 7381385 complement(264428..264709) 1 NC_011988.1 PH Adaption potassium efflux system 264709 phaF 7381385 phaF Agrobacterium vitis S4 PH Adaption potassium efflux system YP_002547134.1 264428 R 311402 CDS YP_002547135.1 222106344 7381386 complement(264706..265182) 1 NC_011988.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 265182 phaE 7381386 phaE Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit E YP_002547135.1 264706 R 311402 CDS YP_002547136.1 222106345 7381387 complement(265182..266813) 1 NC_011988.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 266813 phaD 7381387 phaD Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit D YP_002547136.1 265182 R 311402 CDS YP_002547137.1 222106346 7381388 complement(266810..267145) 1 NC_011988.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 267145 phaC 7381388 phaC Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit C YP_002547137.1 266810 R 311402 CDS YP_002547138.1 222106347 7381389 complement(267145..270048) 1 NC_011988.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 270048 phaA 7381389 phaA Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit A YP_002547138.1 267145 R 311402 CDS YP_002547139.1 222106348 7381390 270661..271647 1 NC_011988.1 hypothetical protein 271647 7381390 Avi_5270 Agrobacterium vitis S4 hypothetical protein YP_002547139.1 270661 D 311402 CDS YP_002547140.1 222106349 7381391 271655..273064 1 NC_011988.1 glutamyl-tRNA amidotransferase subunit A 273064 gatA 7381391 gatA Agrobacterium vitis S4 glutamyl-tRNA amidotransferase subunit A YP_002547140.1 271655 D 311402 CDS YP_002547141.1 222106350 7381392 273061..274581 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide) 274581 7381392 Avi_5272 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide) YP_002547141.1 273061 D 311402 CDS YP_002547142.1 222106351 7381393 274571..275620 1 NC_011988.1 sugar ABC transporter permease 275620 7381393 Avi_5273 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547142.1 274571 D 311402 CDS YP_002547143.1 222106352 7381394 275617..276561 1 NC_011988.1 sugar ABC transporter permease 276561 7381394 Avi_5274 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547143.1 275617 D 311402 CDS YP_002547144.1 222106353 7381395 276755..277867 1 NC_011988.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 277867 7381395 Avi_5276 Agrobacterium vitis S4 cytosine deaminase YP_002547144.1 276755 D 311402 CDS YP_002547145.1 222106354 7381396 complement(277861..279468) 1 NC_011988.1 cytosine deaminase 279468 7381396 Avi_5277 Agrobacterium vitis S4 cytosine deaminase YP_002547145.1 277861 R 311402 CDS YP_002547146.1 222106355 7381397 complement(279465..280511) 1 NC_011988.1 hypothetical protein 280511 7381397 Avi_5278 Agrobacterium vitis S4 hypothetical protein YP_002547146.1 279465 R 311402 CDS YP_002547147.1 222106356 7381398 complement(280508..281344) 1 NC_011988.1 creatinine amidohydrolase 281344 7381398 Avi_5280 Agrobacterium vitis S4 creatinine amidohydrolase YP_002547147.1 280508 R 311402 CDS YP_002547148.1 222106357 7381399 complement(281341..282822) 1 NC_011988.1 oxidoreductase 282822 7381399 Avi_5281 Agrobacterium vitis S4 oxidoreductase YP_002547148.1 281341 R 311402 CDS YP_002547149.1 222106358 7381400 complement(282815..283612) 1 NC_011988.1 ABC transporter 283612 7381400 Avi_5282 Agrobacterium vitis S4 ABC transporter YP_002547149.1 282815 R 311402 CDS YP_002547150.1 222106359 7381401 complement(283609..284487) 1 NC_011988.1 ABC transporter permease 284487 potB 7381401 potB Agrobacterium vitis S4 ABC transporter permease YP_002547150.1 283609 R 311402 CDS YP_002547151.1 222106360 7381402 complement(284484..285590) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (putrescine) 285590 potG 7381402 potG Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (putrescine) YP_002547151.1 284484 R 311402 CDS YP_002547152.1 222106361 7380653 complement(285594..286676) 1 NC_011988.1 ABC transporter substrate binding protein (putrescine) 286676 potF 7380653 potF Agrobacterium vitis S4 ABC transporter substrate binding protein (putrescine) YP_002547152.1 285594 R 311402 CDS YP_002547153.1 222106362 7380654 complement(286789..287790) 1 NC_011988.1 LysR family transcriptional regulator 287790 7380654 Avi_5286 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547153.1 286789 R 311402 CDS YP_002547154.1 222106363 7380655 complement(287951..290641) 1 NC_011988.1 two component response regulator 290641 7380655 Avi_5287 Agrobacterium vitis S4 two component response regulator YP_002547154.1 287951 R 311402 CDS YP_002547155.1 222106364 7380656 290717..292138 1 NC_011988.1 glutamyl-tRNA amidotransferase subunit A 292138 gatA 7380656 gatA Agrobacterium vitis S4 glutamyl-tRNA amidotransferase subunit A YP_002547155.1 290717 D 311402 CDS YP_002547156.1 222106365 7380657 292179..293732 1 NC_011988.1 ABC transporter 293732 7380657 Avi_5289 Agrobacterium vitis S4 ABC transporter YP_002547156.1 292179 D 311402 CDS YP_002547157.1 222106366 7380658 293788..294711 1 NC_011988.1 peptide ABC transporter permease 294711 7380658 Avi_5290 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547157.1 293788 D 311402 CDS YP_002547158.1 222106367 7380659 294708..295556 1 NC_011988.1 peptide ABC transporter permease 295556 dppC 7380659 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002547158.1 294708 D 311402 CDS YP_002547159.1 222106368 7380660 295553..296386 1 NC_011988.1 ABC transporter ATPase 296386 moaD 7380660 moaD Agrobacterium vitis S4 ABC transporter ATPase YP_002547159.1 295553 D 311402 CDS YP_002547160.1 222106369 7380661 296383..297267 1 NC_011988.1 ABC transporter ATPase 297267 moaD 7380661 moaD Agrobacterium vitis S4 ABC transporter ATPase YP_002547160.1 296383 D 311402 CDS YP_002547161.1 222106370 7380662 297354..299003 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (peptide) 299003 7380662 Avi_5294 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (peptide) YP_002547161.1 297354 D 311402 CDS YP_002547162.1 222106371 7380663 299389..299838 1 NC_011988.1 transcriptional regulator MarR family 299838 7380663 Avi_5296 Agrobacterium vitis S4 transcriptional regulator MarR family YP_002547162.1 299389 D 311402 CDS YP_002547163.1 222106372 7380664 299916..301247 1 NC_011988.1 oxidoreductase 301247 7380664 Avi_5297 Agrobacterium vitis S4 oxidoreductase YP_002547163.1 299916 D 311402 CDS YP_002547164.1 222106373 7380665 301451..303121 1 NC_011988.1 ABC transporter substrate binding protein (oligopeptide) 303121 7380665 Avi_5299 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002547164.1 301451 D 311402 CDS YP_002547165.1 222106374 7380666 303297..304247 1 NC_011988.1 peptide ABC transporter permease 304247 7380666 Avi_5300 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547165.1 303297 D 311402 CDS YP_002547166.1 222106375 7380667 304280..305170 1 NC_011988.1 peptide ABC transporter permease 305170 7380667 Avi_5301 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547166.1 304280 D 311402 CDS YP_002547167.1 222106376 7380668 305336..306475 1 NC_011988.1 transcriptional regulator ROK family 306475 xylR 7380668 xylR Agrobacterium vitis S4 transcriptional regulator ROK family YP_002547167.1 305336 D 311402 CDS YP_002547168.1 222106377 7380669 306472..307239 1 NC_011988.1 ABC transporter ATPase 307239 7380669 Avi_5304 Agrobacterium vitis S4 ABC transporter ATPase YP_002547168.1 306472 D 311402 CDS YP_002547169.1 222106378 7380670 307276..308316 1 NC_011988.1 ABC transporter binding protein 308316 7380670 Avi_5305 Agrobacterium vitis S4 ABC transporter binding protein YP_002547169.1 307276 D 311402 CDS YP_002547170.1 222106379 7380671 308369..309373 1 NC_011988.1 ribose ABC transporter permease 309373 rbsC 7380671 rbsC Agrobacterium vitis S4 ribose ABC transporter permease YP_002547170.1 308369 D 311402 CDS YP_002547171.1 222106380 7380672 309370..310140 1 NC_011988.1 dehydrogenase 310140 7380672 Avi_5308 Agrobacterium vitis S4 dehydrogenase YP_002547171.1 309370 D 311402 CDS YP_002547172.1 222106381 7380673 complement(310237..310734) 1 NC_011988.1 Transcriptional regulator 310734 7380673 Avi_5309 Agrobacterium vitis S4 Transcriptional regulator YP_002547172.1 310237 R 311402 CDS YP_002547173.1 222106382 7380674 310912..311457 1 NC_011988.1 flavoprotein oxidoreductase 311457 7380674 Avi_5310 Agrobacterium vitis S4 flavoprotein oxidoreductase YP_002547173.1 310912 D 311402 CDS YP_002547174.1 222106383 7380675 311704..312987 1 NC_011988.1 indole dioxygenase 312987 7380675 Avi_5311 Agrobacterium vitis S4 indole dioxygenase YP_002547174.1 311704 D 311402 CDS YP_002547175.1 222106384 7380676 313060..314382 1 NC_011988.1 MFS permease 314382 7380676 Avi_5313 Agrobacterium vitis S4 MFS permease YP_002547175.1 313060 D 311402 CDS YP_002547176.1 222106385 7380677 314409..315788 1 NC_011988.1 Carbohydrate-selective porin 315788 7380677 Avi_5314 Agrobacterium vitis S4 Carbohydrate-selective porin YP_002547176.1 314409 D 311402 CDS YP_002547177.1 222106386 7380678 315851..316270 1 NC_011988.1 hypothetical protein 316270 7380678 Avi_5315 Agrobacterium vitis S4 hypothetical protein YP_002547177.1 315851 D 311402 CDS YP_002547178.1 222106387 7380679 316343..316933 1 NC_011988.1 glutathione S-transferase 316933 attY 7380679 attY Agrobacterium vitis S4 glutathione S-transferase YP_002547178.1 316343 D 311402 CDS YP_002547179.1 222106388 7380680 316946..317845 1 NC_011988.1 oxidoreductase 317845 7380680 Avi_5318 Agrobacterium vitis S4 oxidoreductase YP_002547179.1 316946 D 311402 CDS YP_002547180.1 222106389 7380681 318061..318951 1 NC_011988.1 hypothetical protein 318951 7380681 Avi_5319 Agrobacterium vitis S4 hypothetical protein YP_002547180.1 318061 D 311402 CDS YP_002547181.1 222106390 7380682 318967..319818 1 NC_011988.1 fumarylacetoacetate (FAA) hydrolase family protein 319818 7380682 Avi_5320 Agrobacterium vitis S4 fumarylacetoacetate (FAA) hydrolase family protein YP_002547181.1 318967 D 311402 CDS YP_002547182.1 222106391 7380683 319994..321124 1 NC_011988.1 dehydrogenase 321124 7380683 Avi_5321 Agrobacterium vitis S4 dehydrogenase YP_002547182.1 319994 D 311402 CDS YP_002547183.1 222106392 7380684 complement(321142..322455) 1 NC_011988.1 glycosylase 322455 7380684 Avi_5322 Agrobacterium vitis S4 glycosylase YP_002547183.1 321142 R 311402 CDS YP_002547184.1 222106393 7380685 complement(322491..324770) 1 NC_011988.1 glycosyltransferase 324770 7380685 Avi_5324 Agrobacterium vitis S4 glycosyltransferase YP_002547184.1 322491 R 311402 CDS YP_002547185.1 222106394 7380686 complement(324890..325237) 1 NC_011988.1 hypothetical protein 325237 7380686 Avi_5325 Agrobacterium vitis S4 hypothetical protein YP_002547185.1 324890 R 311402 CDS YP_002547186.1 222106395 7380687 complement(325759..327915) 1 NC_011988.1 catalase C 327915 catE 7380687 catE Agrobacterium vitis S4 catalase C YP_002547186.1 325759 R 311402 CDS YP_002547187.1 222106396 7380688 complement(328078..329682) 1 NC_011988.1 phosphate transporter 329682 7380688 Avi_5327 Agrobacterium vitis S4 phosphate transporter YP_002547187.1 328078 R 311402 CDS YP_002547188.1 222106397 7380689 330054..331229 1 NC_011988.1 ABC transporter ATPase 331229 7380689 Avi_5328 Agrobacterium vitis S4 ABC transporter ATPase YP_002547188.1 330054 D 311402 CDS YP_002547189.1 222106398 7380690 331226..332152 1 NC_011988.1 ABC transporter permease 332152 7380690 Avi_5329 Agrobacterium vitis S4 ABC transporter permease YP_002547189.1 331226 D 311402 CDS YP_002547190.1 222106399 7380691 332149..332973 1 NC_011988.1 ABC transporter 332973 7380691 Avi_5330 Agrobacterium vitis S4 ABC transporter YP_002547190.1 332149 D 311402 CDS YP_002547191.1 222106400 7380692 333017..334312 1 NC_011988.1 ABC transporter substrate binding protein (sugar) 334312 7380692 Avi_5331 Agrobacterium vitis S4 ABC transporter substrate binding protein (sugar) YP_002547191.1 333017 D 311402 CDS YP_002547192.1 222106401 7380694 complement(335340..336872) 1 NC_011988.1 vanillin: NAD oxidoreductase 336872 vdh 7380694 vdh Agrobacterium vitis S4 vanillin: NAD oxidoreductase YP_002547192.1 335340 R 311402 CDS YP_002547193.1 222106402 7380695 complement(337043..338479) 1 NC_011988.1 glucokinase 338479 7380695 Avi_5336 Agrobacterium vitis S4 glucokinase YP_002547193.1 337043 R 311402 CDS YP_002547194.1 222106403 7380696 complement(338494..339408) 1 NC_011988.1 aldolase 339408 7380696 Avi_5337 Agrobacterium vitis S4 aldolase YP_002547194.1 338494 R 311402 CDS YP_002547195.1 222106404 7380697 339684..340625 1 NC_011988.1 transcriptional regulator 340625 7380697 Avi_5338 Agrobacterium vitis S4 transcriptional regulator YP_002547195.1 339684 D 311402 CDS YP_002547196.1 222106405 7380698 340737..341726 1 NC_011988.1 ABC transporter substrate binding protein (ribose) 341726 rbsB 7380698 rbsB Agrobacterium vitis S4 ABC transporter substrate binding protein (ribose) YP_002547196.1 340737 D 311402 CDS YP_002547197.1 222106406 7380699 341848..342894 1 NC_011988.1 ribose ABC transporter permease 342894 rbsC 7380699 rbsC Agrobacterium vitis S4 ribose ABC transporter permease YP_002547197.1 341848 D 311402 CDS YP_002547198.1 222106407 7380700 342884..343633 1 NC_011988.1 ABC transporter 343633 7380700 Avi_5342 Agrobacterium vitis S4 ABC transporter YP_002547198.1 342884 D 311402 CDS YP_002547199.1 222106408 7380701 343674..344402 1 NC_011988.1 carbonyl reductase 344402 cbr 7380701 cbr Agrobacterium vitis S4 carbonyl reductase YP_002547199.1 343674 D 311402 CDS YP_002547200.1 222106409 7380702 complement(344389..345795) 1 NC_011988.1 hypothetical protein 345795 dapE 7380702 dapE Agrobacterium vitis S4 hypothetical protein YP_002547200.1 344389 R 311402 CDS YP_002547201.1 222106410 7380703 complement(345838..347010) 1 NC_011988.1 hypothetical protein 347010 mdeA 7380703 mdeA Agrobacterium vitis S4 hypothetical protein YP_002547201.1 345838 R 311402 CDS YP_002547202.1 222106411 7380704 complement(347007..347735) 1 NC_011988.1 GntR family transcriptional regulator 347735 7380704 Avi_5347 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547202.1 347007 R 311402 CDS YP_002547203.1 222106412 7380705 347965..349584 1 NC_011988.1 ABC transporter substrate binding protein (dipeptide) 349584 dppA 7380705 dppA Agrobacterium vitis S4 ABC transporter substrate binding protein (dipeptide) YP_002547203.1 347965 D 311402 CDS YP_002547204.1 222106413 7380706 349915..350994 1 NC_011988.1 peptide ABC transporter permease 350994 dppB 7380706 dppB Agrobacterium vitis S4 peptide ABC transporter permease YP_002547204.1 349915 D 311402 CDS YP_002547205.1 222106414 7380707 351003..351956 1 NC_011988.1 peptide ABC transporter permease 351956 dppC 7380707 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002547205.1 351003 D 311402 CDS YP_002547206.1 222106415 7380708 351928..352980 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 352980 7380708 Avi_5352 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547206.1 351928 D 311402 CDS YP_002547207.1 222106416 7380709 352977..353951 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 353951 7380709 Avi_5354 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547207.1 352977 D 311402 CDS YP_002547208.1 222106417 7380710 353972..355117 1 NC_011988.1 proline dipeptidase 355117 7380710 Avi_5355 Agrobacterium vitis S4 proline dipeptidase YP_002547208.1 353972 D 311402 CDS YP_002547209.1 222106418 7380711 355234..355950 1 NC_011988.1 GntR family transcriptional regulator 355950 7380711 Avi_5356 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547209.1 355234 D 311402 CDS YP_002547210.1 222106419 7380712 356002..357510 1 NC_011988.1 ABC transporter substrate binding protein (dipeptide) 357510 dppA 7380712 dppA Agrobacterium vitis S4 ABC transporter substrate binding protein (dipeptide) YP_002547210.1 356002 D 311402 CDS YP_002547211.1 222106420 7380713 357611..358558 1 NC_011988.1 peptide ABC transporter permease 358558 dppB 7380713 dppB Agrobacterium vitis S4 peptide ABC transporter permease YP_002547211.1 357611 D 311402 CDS YP_002547212.1 222106421 7380714 358555..359424 1 NC_011988.1 peptide ABC transporter permease 359424 dppC 7380714 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002547212.1 358555 D 311402 CDS YP_002547213.1 222106422 7380715 359472..361256 1 NC_011988.1 gamma-glutamyltransferase 361256 ggt 7380715 ggt Agrobacterium vitis S4 gamma-glutamyltransferase YP_002547213.1 359472 D 311402 CDS YP_002547214.1 222106423 7380716 361301..363136 1 NC_011988.1 ABC transporter ATPase 363136 moaD 7380716 moaD Agrobacterium vitis S4 ABC transporter ATPase YP_002547214.1 361301 D 311402 CDS YP_002547215.1 222106424 7380717 complement(363164..364318) 1 NC_011988.1 glutathionylspermidine synthetase 364318 gsp 7380717 gsp Agrobacterium vitis S4 glutathionylspermidine synthetase YP_002547215.1 363164 R 311402 CDS YP_002547216.1 222106425 7380718 complement(364320..364922) 1 NC_011988.1 hypothetical protein 364922 7380718 Avi_5364 Agrobacterium vitis S4 hypothetical protein YP_002547216.1 364320 R 311402 CDS YP_002547217.1 222106426 7380719 complement(364933..365334) 1 NC_011988.1 hypothetical protein 365334 7380719 Avi_5365 Agrobacterium vitis S4 hypothetical protein YP_002547217.1 364933 R 311402 CDS YP_002547218.1 222106427 7380720 complement(365362..366021) 1 NC_011988.1 hypothetical protein 366021 7380720 Avi_5366 Agrobacterium vitis S4 hypothetical protein YP_002547218.1 365362 R 311402 CDS YP_002547219.1 222106428 7380721 366301..366747 1 NC_011988.1 hypothetical protein 366747 7380721 Avi_5367 Agrobacterium vitis S4 hypothetical protein YP_002547219.1 366301 D 311402 CDS YP_002547220.1 222106429 7380722 366720..367481 1 NC_011988.1 hypothetical protein 367481 7380722 Avi_5368 Agrobacterium vitis S4 hypothetical protein YP_002547220.1 366720 D 311402 CDS YP_002547221.1 222106430 7380723 complement(367573..368919) 1 NC_011988.1 dicarboxylate carrier protein 368919 7380723 Avi_5370 Agrobacterium vitis S4 dicarboxylate carrier protein YP_002547221.1 367573 R 311402 CDS YP_002547222.1 222106431 7380724 complement(369048..370562) 1 NC_011988.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 370562 fadD 7380724 fadD Agrobacterium vitis S4 malonyl-CoA synthase YP_002547222.1 369048 R 311402 CDS YP_002547223.1 222106432 7380725 complement(370659..372056) 1 NC_011988.1 malonyl-CoA decarboxylase 372056 7380725 Avi_5372 Agrobacterium vitis S4 malonyl-CoA decarboxylase YP_002547223.1 370659 R 311402 CDS YP_002547224.1 222106433 7380726 372224..372874 1 NC_011988.1 GntR family transcriptional regulator 372874 7380726 Avi_5373 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547224.1 372224 D 311402 CDS YP_002547225.1 222106434 7380727 372952..375291 1 NC_011988.1 two component response regulator 375291 7380727 Avi_5374 Agrobacterium vitis S4 two component response regulator YP_002547225.1 372952 D 311402 CDS YP_002547226.1 222106435 7380728 375466..376494 1 NC_011988.1 peptide ABC transporter permease 376494 7380728 Avi_5375 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547226.1 375466 D 311402 CDS YP_002547227.1 222106436 7380729 376491..377351 1 NC_011988.1 peptide ABC transporter permease 377351 7380729 Avi_5376 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547227.1 376491 D 311402 CDS YP_002547228.1 222106437 7380730 377354..379021 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (dipeptide) 379021 7380730 Avi_5377 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (dipeptide) YP_002547228.1 377354 D 311402 CDS YP_002547229.1 222106438 7380731 379047..380600 1 NC_011988.1 hydantoinase 380600 7380731 Avi_5378 Agrobacterium vitis S4 hydantoinase YP_002547229.1 379047 D 311402 CDS YP_002547230.1 222106439 7381485 380597..381721 1 NC_011988.1 hypothetical protein 381721 7381485 Avi_5379 Agrobacterium vitis S4 hypothetical protein YP_002547230.1 380597 D 311402 CDS YP_002547231.1 222106440 7381486 381823..382800 1 NC_011988.1 hypothetical protein 382800 7381486 Avi_5380 Agrobacterium vitis S4 hypothetical protein YP_002547231.1 381823 D 311402 CDS YP_002547232.1 222106441 7381487 382841..384415 1 NC_011988.1 ABC transporter substrate binding protein (dipeptide) 384415 7381487 Avi_5381 Agrobacterium vitis S4 ABC transporter substrate binding protein (dipeptide) YP_002547232.1 382841 D 311402 CDS YP_002547233.1 222106442 7381488 complement(384434..384910) 1 NC_011988.1 two-component system regulatory protein 384910 7381488 Avi_5382 Agrobacterium vitis S4 two-component system regulatory protein YP_002547233.1 384434 R 311402 CDS YP_002547234.1 222106443 7381489 complement(384907..387261) 1 NC_011988.1 Signal transduction histidine kinase 387261 7381489 Avi_5383 Agrobacterium vitis S4 Signal transduction histidine kinase YP_002547234.1 384907 R 311402 CDS YP_002547235.1 222106444 7381490 complement(387261..387911) 1 NC_011988.1 two component response regulator 387911 narL 7381490 narL Agrobacterium vitis S4 two component response regulator YP_002547235.1 387261 R 311402 CDS YP_002547236.1 222106445 7381491 complement(387918..389003) 1 NC_011988.1 two component sensor kinase 389003 7381491 Avi_5386 Agrobacterium vitis S4 two component sensor kinase YP_002547236.1 387918 R 311402 CDS YP_002547237.1 222106446 7381492 389202..389666 1 NC_011988.1 hypothetical signal peptide protein 389666 7381492 Avi_5387 Agrobacterium vitis S4 hypothetical signal peptide protein YP_002547237.1 389202 D 311402 CDS YP_002547238.1 222106447 7381493 complement(389727..391001) 1 NC_011988.1 glucose/galactose transporter 391001 7381493 Avi_5388 Agrobacterium vitis S4 glucose/galactose transporter YP_002547238.1 389727 R 311402 CDS YP_002547239.1 222106448 7381494 complement(391433..392470) 1 NC_011988.1 ABC transporter ATPase 392470 7381494 Avi_5390 Agrobacterium vitis S4 ABC transporter ATPase YP_002547239.1 391433 R 311402 CDS YP_002547240.1 222106449 7381495 complement(392485..393354) 1 NC_011988.1 sulfate ABC transporter permease CysW 393354 cysW 7381495 cysW Agrobacterium vitis S4 sulfate ABC transporter permease CysW YP_002547240.1 392485 R 311402 CDS YP_002547241.1 222106450 7381496 complement(393341..394198) 1 NC_011988.1 sulfate ABC transporter permease CysT 394198 cysT 7381496 cysT Agrobacterium vitis S4 sulfate ABC transporter permease CysT YP_002547241.1 393341 R 311402 CDS YP_002547242.1 222106451 7381497 complement(394226..395242) 1 NC_011988.1 ABC transporter substrate binding protein (sulfate) 395242 7381497 Avi_5393 Agrobacterium vitis S4 ABC transporter substrate binding protein (sulfate) YP_002547242.1 394226 R 311402 CDS YP_002547243.1 222106452 7381498 complement(395436..396473) 1 NC_011988.1 transcriptional regulator LacI family 396473 thuR 7381498 thuR Agrobacterium vitis S4 transcriptional regulator LacI family YP_002547243.1 395436 R 311402 CDS YP_002547244.1 222106453 7381499 396927..397967 1 NC_011988.1 hypothetical protein 397967 7381499 Avi_5395 Agrobacterium vitis S4 hypothetical protein YP_002547244.1 396927 D 311402 CDS YP_002547245.1 222106454 7381500 397974..398912 1 NC_011988.1 hypothetical protein 398912 7381500 Avi_5396 Agrobacterium vitis S4 hypothetical protein YP_002547245.1 397974 D 311402 CDS YP_002547246.1 222106455 7381501 399009..400220 1 NC_011988.1 ABC transporter substrate binding protein (sugar) 400220 7381501 Avi_5398 Agrobacterium vitis S4 ABC transporter substrate binding protein (sugar) YP_002547246.1 399009 D 311402 CDS YP_002547247.1 222106456 7381502 400358..401260 1 NC_011988.1 sugar ABC transporter permease 401260 thuF 7381502 thuF Agrobacterium vitis S4 sugar ABC transporter permease YP_002547247.1 400358 D 311402 CDS YP_002547248.1 222106457 7381503 401257..402084 1 NC_011988.1 sugar ABC transporter permease 402084 7381503 Avi_5400 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547248.1 401257 D 311402 CDS YP_002547249.1 222106458 7381504 402081..403181 1 NC_011988.1 ABC transporter ATPase 403181 7381504 Avi_5401 Agrobacterium vitis S4 ABC transporter ATPase YP_002547249.1 402081 D 311402 CDS YP_002547250.1 222106459 7381505 403631..404620 1 NC_011988.1 hypothetical protein 404620 7381505 Avi_5403 Agrobacterium vitis S4 hypothetical protein YP_002547250.1 403631 D 311402 CDS YP_002547251.1 222106460 7381506 404626..405399 1 NC_011988.1 ABC transporter ATPase 405399 7381506 Avi_5404 Agrobacterium vitis S4 ABC transporter ATPase YP_002547251.1 404626 D 311402 CDS YP_002547252.1 222106461 7381507 405455..406210 1 NC_011988.1 ABC transporter permease 406210 7381507 Avi_5406 Agrobacterium vitis S4 ABC transporter permease YP_002547252.1 405455 D 311402 CDS YP_002547253.1 222106462 7381508 406328..407311 1 NC_011988.1 flavonol synthase/dioxygenase 407311 7381508 Avi_5408 Agrobacterium vitis S4 flavonol synthase/dioxygenase YP_002547253.1 406328 D 311402 CDS YP_002547254.1 222106463 7381509 407398..408300 1 NC_011988.1 LysR family transcriptional regulator 408300 7381509 Avi_5409 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547254.1 407398 D 311402 CDS YP_002547255.1 222106464 7381510 408372..409754 1 NC_011988.1 cytosine deaminase-like protein 409754 7381510 Avi_5410 Agrobacterium vitis S4 cytosine deaminase-like protein YP_002547255.1 408372 D 311402 CDS YP_002547256.1 222106465 7381511 complement(409732..412758) 1 NC_011988.1 beta-galactosidase 412758 7381511 Avi_5411 Agrobacterium vitis S4 beta-galactosidase YP_002547256.1 409732 R 311402 CDS YP_002547257.1 222106466 7381512 413162..414352 1 NC_011988.1 transcriptional regulator ROK family 414352 7381512 Avi_5412 Agrobacterium vitis S4 transcriptional regulator ROK family YP_002547257.1 413162 D 311402 CDS YP_002547258.1 222106467 7381513 complement(414368..415171) 1 NC_011988.1 transporter formate/nitrite transporter family 415171 7381513 Avi_5413 Agrobacterium vitis S4 transporter formate/nitrite transporter family YP_002547258.1 414368 R 311402 CDS YP_002547259.1 222106468 7381514 complement(415368..416759) 1 NC_011988.1 chlorohydrolase family protein 416759 7381514 Avi_5414 Agrobacterium vitis S4 chlorohydrolase family protein YP_002547259.1 415368 R 311402 CDS YP_002547260.1 222106469 7381515 complement(416752..417603) 1 NC_011988.1 vanillate O-demethylase oxygenase subunit 417603 7381515 Avi_5416 Agrobacterium vitis S4 vanillate O-demethylase oxygenase subunit YP_002547260.1 416752 R 311402 CDS YP_002547261.1 222106470 7381516 complement(417627..418562) 1 NC_011988.1 sugar ABC transporter permease 418562 7381516 Avi_5417 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547261.1 417627 R 311402 CDS YP_002547262.1 222106471 7381517 complement(418574..419620) 1 NC_011988.1 sugar ABC transporter permease 419620 7381517 Avi_5418 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547262.1 418574 R 311402 CDS YP_002547263.1 222106472 7381518 complement(419613..421208) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide) 421208 7381518 Avi_5419 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide) YP_002547263.1 419613 R 311402 CDS YP_002547264.1 222106473 7381519 complement(421282..422394) 1 NC_011988.1 lipoprotein 422394 7381519 Avi_5420 Agrobacterium vitis S4 lipoprotein YP_002547264.1 421282 R 311402 CDS YP_002547265.1 222106474 7381520 423154..423846 1 NC_011988.1 oxidoreductase 423846 7381520 Avi_5422 Agrobacterium vitis S4 oxidoreductase YP_002547265.1 423154 D 311402 CDS YP_002547266.1 222106475 7381521 423846..424478 1 NC_011988.1 Gst12 glutathione-S-transferase 424478 7381521 Avi_5423 Agrobacterium vitis S4 Gst12 glutathione-S-transferase YP_002547266.1 423846 D 311402 CDS YP_002547267.1 222106476 7381522 424533..426332 1 NC_011988.1 adenine deaminase 426332 ade 7381522 ade Agrobacterium vitis S4 adenine deaminase YP_002547267.1 424533 D 311402 CDS YP_002547268.1 222106477 7381523 426332..427282 1 NC_011988.1 Transcriptional regulator 427282 7381523 Avi_5425 Agrobacterium vitis S4 Transcriptional regulator YP_002547268.1 426332 D 311402 CDS YP_002547269.1 222106478 7381524 427376..427876 1 NC_011988.1 Sulfopyruvate decarboxylase alpha subunit 427876 7381524 Avi_5426 Agrobacterium vitis S4 Sulfopyruvate decarboxylase alpha subunit YP_002547269.1 427376 D 311402 CDS YP_002547270.1 222106479 7381525 427873..428481 1 NC_011988.1 thiamine pyrophosphate-requiring enzyme 428481 7381525 Avi_5427 Agrobacterium vitis S4 thiamine pyrophosphate-requiring enzyme YP_002547270.1 427873 D 311402 CDS YP_002547271.1 222106480 7381527 430113..431513 1 NC_011988.1 chlorohydrolase 431513 7381527 Avi_5431 Agrobacterium vitis S4 chlorohydrolase YP_002547271.1 430113 D 311402 CDS YP_002547272.1 222106481 7381528 431510..432376 1 NC_011988.1 phenylpropionate dioxygenase 432376 7381528 Avi_5432 Agrobacterium vitis S4 phenylpropionate dioxygenase YP_002547272.1 431510 D 311402 CDS YP_002547273.1 222106482 7381529 432376..435522 1 NC_011988.1 dehydrogenase 435522 7381529 Avi_5433 Agrobacterium vitis S4 dehydrogenase YP_002547273.1 432376 D 311402 CDS YP_002547274.1 222106483 7381530 435519..436004 1 NC_011988.1 xanthine dehydrogenase 436004 xdhA 7381530 xdhA Agrobacterium vitis S4 xanthine dehydrogenase YP_002547274.1 435519 D 311402 CDS YP_002547275.1 222106484 7381531 436006..437520 1 NC_011988.1 aldehyde dehydrogenase 437520 dhaS 7381531 dhaS Agrobacterium vitis S4 aldehyde dehydrogenase YP_002547275.1 436006 D 311402 CDS YP_002547276.1 222106485 7381532 437682..438389 1 NC_011988.1 3-oxoadipate CoA-transferase subunit A 438389 pcaI 7381532 pcaI Agrobacterium vitis S4 3-oxoadipate CoA-transferase subunit A YP_002547276.1 437682 D 311402 CDS YP_002547277.1 222106486 7381533 438389..439036 1 NC_011988.1 3-oxoadipate CoA-transferase subunit B 439036 pcaJ 7381533 pcaJ Agrobacterium vitis S4 3-oxoadipate CoA-transferase subunit B YP_002547277.1 438389 D 311402 CDS YP_002547278.1 222106487 7381534 439260..440015 1 NC_011988.1 GntR family transcriptional regulator 440015 7381534 Avi_5438 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547278.1 439260 D 311402 CDS YP_002547279.1 222106488 7381535 440012..441151 1 NC_011988.1 L-lactate dehydrogenase 441151 lldA 7381535 lldA Agrobacterium vitis S4 L-lactate dehydrogenase YP_002547279.1 440012 D 311402 CDS YP_002547280.1 222106489 7381536 441497..442336 1 NC_011988.1 hypothetical protein 442336 7381536 Avi_5440 Agrobacterium vitis S4 hypothetical protein YP_002547280.1 441497 D 311402 CDS YP_002547281.1 222106490 7381537 442385..443236 1 NC_011988.1 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 443236 7381537 Avi_5441 Agrobacterium vitis S4 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_002547281.1 442385 D 311402 CDS YP_002547282.1 222106491 7381538 443429..445072 1 NC_011988.1 3-(3-hydroxyphenyl)propionate hydroxylase; 3-(3-hydroxy-phenyl)propionate hydroxylase FAD/NAD(P)-binding 445072 7381538 Avi_5443 Agrobacterium vitis S4 3-(3-hydroxyphenyl)propionate hydroxylase; 3-(3-hydroxy-phenyl)propionate hydroxylase FAD/NAD(P)-binding YP_002547282.1 443429 D 311402 CDS YP_002547283.1 222106492 7381539 445697..446917 1 NC_011988.1 ABC transporter substrate binding protein (branched amino acid) 446917 livJ 7381539 livJ Agrobacterium vitis S4 ABC transporter substrate binding protein (branched amino acid) YP_002547283.1 445697 D 311402 CDS YP_002547284.1 222106493 7381540 447089..447946 1 NC_011988.1 ABC transporter permease 447946 livH 7381540 livH Agrobacterium vitis S4 ABC transporter permease YP_002547284.1 447089 D 311402 CDS YP_002547285.1 222106494 7381541 447956..448954 1 NC_011988.1 branched-chain amino acid ABC transporter permease 448954 7381541 Avi_5446 Agrobacterium vitis S4 branched-chain amino acid ABC transporter permease YP_002547285.1 447956 D 311402 CDS YP_002547286.1 222106495 7381542 448951..449694 1 NC_011988.1 ABC transporter ATPase 449694 7381542 Avi_5447 Agrobacterium vitis S4 ABC transporter ATPase YP_002547286.1 448951 D 311402 CDS YP_002547287.1 222106496 7381543 449691..450398 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (branched chain amino acid) 450398 livF 7381543 livF Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (branched chain amino acid) YP_002547287.1 449691 D 311402 CDS YP_002547288.1 222106497 7381544 complement(450460..452307) 1 NC_011988.1 4-hydroxyphenylpyruvate dioxygenase 452307 hppD 7381544 hppD Agrobacterium vitis S4 4-hydroxyphenylpyruvate dioxygenase YP_002547288.1 450460 R 311402 CDS YP_002547289.1 222106498 7381545 452505..453230 1 NC_011988.1 TetR family transcriptional regulator 453230 7381545 Avi_5451 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002547289.1 452505 D 311402 CDS YP_002547290.1 222106499 7381546 complement(453205..453648) 1 NC_011988.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 453648 aroQ 7381546 aroQ Agrobacterium vitis S4 3-dehydroquinate dehydratase YP_002547290.1 453205 R 311402 CDS YP_002547291.1 222106500 7381547 complement(453645..454514) 1 NC_011988.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 454514 aroE 7381547 aroE Agrobacterium vitis S4 shikimate 5-dehydrogenase YP_002547291.1 453645 R 311402 CDS YP_002547292.1 222106501 7381548 complement(454586..455344) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (amino acid) 455344 7381548 Avi_5456 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (amino acid) YP_002547292.1 454586 R 311402 CDS YP_002547293.1 222106502 7381549 complement(455358..456197) 1 NC_011988.1 amino acid ABC transporter substrate-binding protein 456197 7381549 Avi_5457 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002547293.1 455358 R 311402 CDS YP_002547294.1 222106503 7381550 complement(456328..456978) 1 NC_011988.1 amino acid ABC transporter permease 456978 7381550 Avi_5458 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002547294.1 456328 R 311402 CDS YP_002547295.1 222106504 7381551 complement(456989..457657) 1 NC_011988.1 amino acid ABC transporter permease 457657 7381551 Avi_5459 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002547295.1 456989 R 311402 CDS YP_002547296.1 222106505 7381552 complement(458285..459175) 1 NC_011988.1 hypothetical protein 459175 7381552 Avi_5460 Agrobacterium vitis S4 hypothetical protein YP_002547296.1 458285 R 311402 CDS YP_002547297.1 222106506 7381553 complement(459765..461528) 1 NC_011988.1 malto-oligosyltrehalose trehalohydrolase 461528 treZ 7381553 treZ Agrobacterium vitis S4 malto-oligosyltrehalose trehalohydrolase YP_002547297.1 459765 R 311402 CDS YP_002547298.1 222106507 7381554 461742..464273 1 NC_011988.1 malto-oligosyltrehalose synthase 464273 treY 7381554 treY Agrobacterium vitis S4 malto-oligosyltrehalose synthase YP_002547298.1 461742 D 311402 CDS YP_002547299.1 222106508 7381555 464389..464820 1 NC_011988.1 osmotically inducible protein OsmC 464820 7381555 Avi_5463 Agrobacterium vitis S4 osmotically inducible protein OsmC YP_002547299.1 464389 D 311402 CDS YP_002547300.1 222106509 7381556 464859..465923 1 NC_011988.1 hypothetical protein 465923 7381556 Avi_5465 Agrobacterium vitis S4 hypothetical protein YP_002547300.1 464859 D 311402 CDS YP_002547301.1 222106510 7381557 466285..467784 1 NC_011988.1 hypothetical protein 467784 7381557 Avi_5466 Agrobacterium vitis S4 hypothetical protein YP_002547301.1 466285 D 311402 CDS YP_002547302.1 222106511 7381558 complement(467837..468664) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (aliphatic sulfonate) 468664 7381558 Avi_5467 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (aliphatic sulfonate) YP_002547302.1 467837 R 311402 CDS YP_002547303.1 222106512 7381559 complement(468670..469524) 1 NC_011988.1 aliphatic sulfonate ABC transporter permease 469524 7381559 Avi_5468 Agrobacterium vitis S4 aliphatic sulfonate ABC transporter permease YP_002547303.1 468670 R 311402 CDS YP_002547304.1 222106513 7381560 complement(469565..470533) 1 NC_011988.1 ABC transporter substrate binding protein (aliphatic sulfonate) 470533 7381560 Avi_5469 Agrobacterium vitis S4 ABC transporter substrate binding protein (aliphatic sulfonate) YP_002547304.1 469565 R 311402 CDS YP_002547305.1 222106514 7381561 470916..471881 1 NC_011988.1 ABC transporter substrate binding protein (aliphatic sulfonate) 471881 ssuA 7381561 ssuA Agrobacterium vitis S4 ABC transporter substrate binding protein (aliphatic sulfonate) YP_002547305.1 470916 D 311402 CDS YP_002547306.1 222106515 7381562 471907..473097 1 NC_011988.1 sulfonate monooxygenase 473097 ssuD 7381562 ssuD Agrobacterium vitis S4 sulfonate monooxygenase YP_002547306.1 471907 D 311402 CDS YP_002547307.1 222106516 7381563 473367..473834 1 NC_011988.1 hypothetical protein 473834 7381563 Avi_5475 Agrobacterium vitis S4 hypothetical protein YP_002547307.1 473367 D 311402 CDS YP_002547308.1 222106517 7381564 complement(473989..474537) 1 NC_011988.1 hypothetical protein 474537 7381564 Avi_5477 Agrobacterium vitis S4 hypothetical protein YP_002547308.1 473989 R 311402 CDS YP_002547309.1 222106518 7381565 complement(474902..476074) 1 NC_011988.1 FMNH2-dependent monooxygenase 476074 7381565 Avi_5479 Agrobacterium vitis S4 FMNH2-dependent monooxygenase YP_002547309.1 474902 R 311402 CDS YP_002547310.1 222106519 7381566 complement(476348..477259) 1 NC_011988.1 LysR family transcriptional regulator 477259 7381566 Avi_5481 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547310.1 476348 R 311402 CDS YP_002547311.1 222106520 7381567 477468..478265 1 NC_011988.1 lipase esterase 478265 7381567 Avi_5482 Agrobacterium vitis S4 lipase esterase YP_002547311.1 477468 D 311402 CDS YP_002547312.1 222106521 7381403 478324..479514 1 NC_011988.1 HlyD family secretion protein 479514 mexE 7381403 mexE Agrobacterium vitis S4 HlyD family secretion protein YP_002547312.1 478324 D 311402 CDS YP_002547313.1 222106522 7381404 479695..482895 1 NC_011988.1 AcrB/AcrD/AcrF family protein 482895 mexF 7381404 mexF Agrobacterium vitis S4 AcrB/AcrD/AcrF family protein YP_002547313.1 479695 D 311402 CDS YP_002547314.1 222106523 7381405 complement(482978..483934) 1 NC_011988.1 LysR family transcriptional regulator 483934 7381405 Avi_5485 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547314.1 482978 R 311402 CDS YP_002547315.1 222106524 7381406 484167..485339 1 NC_011988.1 hypothetical protein 485339 7381406 Avi_5486 Agrobacterium vitis S4 hypothetical protein YP_002547315.1 484167 D 311402 CDS YP_002547316.1 222106525 7381407 485336..486016 1 NC_011988.1 hypothetical protein 486016 7381407 Avi_5487 Agrobacterium vitis S4 hypothetical protein YP_002547316.1 485336 D 311402 CDS YP_002547317.1 222106526 7381408 486049..486996 1 NC_011988.1 Glyoxalase/bleomycin resistance 486996 7381408 Avi_5488 Agrobacterium vitis S4 Glyoxalase/bleomycin resistance YP_002547317.1 486049 D 311402 CDS YP_002547318.1 222106527 7381409 487014..487373 1 NC_011988.1 ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase 487373 7381409 Avi_5489 Agrobacterium vitis S4 ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase YP_002547318.1 487014 D 311402 CDS YP_002547319.1 222106528 7381410 487377..488507 1 NC_011988.1 hypothetical protein 488507 7381410 Avi_5490 Agrobacterium vitis S4 hypothetical protein YP_002547319.1 487377 D 311402 CDS YP_002547320.1 222106529 7381411 488651..489769 1 NC_011988.1 permease (MFS superfamily) 489769 7381411 Avi_5491 Agrobacterium vitis S4 permease (MFS superfamily) YP_002547320.1 488651 D 311402 CDS YP_002547321.1 222106530 7381412 489766..490347 1 NC_011988.1 transcriptional regulator protein 490347 7381412 Avi_5492 Agrobacterium vitis S4 transcriptional regulator protein YP_002547321.1 489766 D 311402 CDS YP_002547322.1 222106531 7381413 490387..491364 1 NC_011988.1 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 491364 7381413 Avi_5493 Agrobacterium vitis S4 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_002547322.1 490387 D 311402 CDS YP_002547323.1 222106532 7381414 491364..492284 1 NC_011988.1 Nucleoside-diphosphate-sugar epimerase 492284 7381414 Avi_5494 Agrobacterium vitis S4 Nucleoside-diphosphate-sugar epimerase YP_002547323.1 491364 D 311402 CDS YP_002547324.1 222106533 7381415 492281..493057 1 NC_011988.1 cyclase 493057 7381415 Avi_5495 Agrobacterium vitis S4 cyclase YP_002547324.1 492281 D 311402 CDS YP_002547325.1 222106534 7381416 complement(493283..494623) 1 NC_011988.1 ABC transporter ATPase 494623 7381416 Avi_5496 Agrobacterium vitis S4 ABC transporter ATPase YP_002547325.1 493283 R 311402 CDS YP_002547326.1 222106535 7381417 complement(494675..496345) 1 NC_011988.1 ABC-type anion transport system, duplicated permease component 496345 7381417 Avi_5498 Agrobacterium vitis S4 ABC-type anion transport system, duplicated permease component YP_002547326.1 494675 R 311402 CDS YP_002547327.1 222106536 7381418 496749..497819 1 NC_011988.1 two component sensor kinase 497819 7381418 Avi_5501 Agrobacterium vitis S4 two component sensor kinase YP_002547327.1 496749 D 311402 CDS YP_002547328.1 222106537 7381419 497816..498454 1 NC_011988.1 two component response regulator 498454 nwsB 7381419 nwsB Agrobacterium vitis S4 two component response regulator YP_002547328.1 497816 D 311402 CDS YP_002547329.1 222106538 7381420 complement(498509..499414) 1 NC_011988.1 hypothetical protein 499414 7381420 Avi_5503 Agrobacterium vitis S4 hypothetical protein YP_002547329.1 498509 R 311402 CDS YP_002547330.1 222106539 7381421 complement(499411..500556) 1 NC_011988.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 500556 ugpC 7381421 ugpC Agrobacterium vitis S4 glycerol-3-phosphate transporter ATP-binding subunit YP_002547330.1 499411 R 311402 CDS YP_002547331.1 222106540 7381422 complement(500597..501484) 1 NC_011988.1 sn-glycerol-3-phosphate ABC transporter permease 501484 ugpE 7381422 ugpE Agrobacterium vitis S4 sn-glycerol-3-phosphate ABC transporter permease YP_002547331.1 500597 R 311402 CDS YP_002547332.1 222106541 7381423 complement(501492..502382) 1 NC_011988.1 sn-glycerol-3-phosphate ABC transporter permease 502382 ugpA 7381423 ugpA Agrobacterium vitis S4 sn-glycerol-3-phosphate ABC transporter permease YP_002547332.1 501492 R 311402 CDS YP_002547333.1 222106542 7381424 complement(502459..503802) 1 NC_011988.1 ABC transporter substrate binding protein (glycerol 3-phosphate) 503802 ugpB 7381424 ugpB Agrobacterium vitis S4 ABC transporter substrate binding protein (glycerol 3-phosphate) YP_002547333.1 502459 R 311402 CDS YP_002547334.1 222106543 7381425 complement(503988..504830) 1 NC_011988.1 ABC transporter permease 504830 7381425 Avi_5508 Agrobacterium vitis S4 ABC transporter permease YP_002547334.1 503988 R 311402 CDS YP_002547335.1 222106544 7381426 complement(504834..505712) 1 NC_011988.1 ABC transporter permease 505712 7381426 Avi_5510 Agrobacterium vitis S4 ABC transporter permease YP_002547335.1 504834 R 311402 CDS YP_002547336.1 222106545 7381427 complement(505709..506806) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sn-Glycerol-3-phosphate) 506806 ugpC 7381427 ugpC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sn-Glycerol-3-phosphate) YP_002547336.1 505709 R 311402 CDS YP_002547337.1 222106546 7381428 complement(506945..508126) 1 NC_011988.1 ABC transporter substrate-binding protein 508126 7381428 Avi_5512 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002547337.1 506945 R 311402 CDS YP_002547338.1 222106547 7381429 complement(508315..510060) 1 NC_011988.1 hypothetical protein 510060 7381429 Avi_5513 Agrobacterium vitis S4 hypothetical protein YP_002547338.1 508315 R 311402 CDS YP_002547339.1 222106548 7381430 complement(510077..511075) 1 NC_011988.1 transcriptional regulator ROK family 511075 7381430 Avi_5514 Agrobacterium vitis S4 transcriptional regulator ROK family YP_002547339.1 510077 R 311402 CDS YP_002547340.1 222106549 7381431 511602..513503 1 NC_011988.1 ABC transporter substrate binding protein (oligopeptide) 513503 7381431 Avi_5515 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002547340.1 511602 D 311402 CDS YP_002547341.1 222106550 7381432 513627..514613 1 NC_011988.1 peptide ABC transporter permease 514613 7381432 Avi_5516 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547341.1 513627 D 311402 CDS YP_002547342.1 222106551 7381433 514623..515762 1 NC_011988.1 peptide ABC transporter permease 515762 7381433 Avi_5517 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547342.1 514623 D 311402 CDS YP_002547343.1 222106552 7381434 515759..516805 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 516805 7381434 Avi_5518 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547343.1 515759 D 311402 CDS YP_002547344.1 222106553 7381435 516802..517833 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 517833 7381435 Avi_5520 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547344.1 516802 D 311402 CDS YP_002547345.1 222106554 7381436 517991..518647 1 NC_011988.1 two component response regulator 518647 phoP 7381436 phoP Agrobacterium vitis S4 two component response regulator YP_002547345.1 517991 D 311402 CDS YP_002547346.1 222106555 7381437 518651..520033 1 NC_011988.1 Signal transduction histidine kinase 520033 7381437 Avi_5522 Agrobacterium vitis S4 Signal transduction histidine kinase YP_002547346.1 518651 D 311402 CDS YP_002547347.1 222106556 7381438 520212..520916 1 NC_011988.1 phosphoserine phosphatase 520916 7381438 Avi_5523 Agrobacterium vitis S4 phosphoserine phosphatase YP_002547347.1 520212 D 311402 CDS YP_002547348.1 222106557 7381439 520930..522342 1 NC_011988.1 4 animobutyrate aminotransferase 522342 7381439 Avi_5524 Agrobacterium vitis S4 4 animobutyrate aminotransferase YP_002547348.1 520930 D 311402 CDS YP_002547349.1 222106558 7381440 522401..523300 1 NC_011988.1 hypothetical protein 523300 7381440 Avi_5525 Agrobacterium vitis S4 hypothetical protein YP_002547349.1 522401 D 311402 CDS YP_002547350.1 222106559 7381441 523297..523650 1 NC_011988.1 Permeases of the drug/metabolite transporter (DMT) superfamily 523650 7381441 Avi_5526 Agrobacterium vitis S4 Permeases of the drug/metabolite transporter (DMT) superfamily YP_002547350.1 523297 D 311402 CDS YP_002547351.1 222106560 7381442 523647..524528 1 NC_011988.1 hypothetical protein 524528 7381442 Avi_5527 Agrobacterium vitis S4 hypothetical protein YP_002547351.1 523647 D 311402 CDS YP_002547352.1 222106561 7381443 524525..525340 1 NC_011988.1 carboxylesterase 525340 7381443 Avi_5529 Agrobacterium vitis S4 carboxylesterase YP_002547352.1 524525 D 311402 CDS YP_002547353.1 222106562 7381444 525402..526550 1 NC_011988.1 hypothetical protein 526550 7381444 Avi_5530 Agrobacterium vitis S4 hypothetical protein YP_002547353.1 525402 D 311402 CDS YP_002547354.1 222106563 7381445 526547..526915 1 NC_011988.1 Permeases of the drug/metabolite transporter (DMT) superfamily 526915 7381445 Avi_5531 Agrobacterium vitis S4 Permeases of the drug/metabolite transporter (DMT) superfamily YP_002547354.1 526547 D 311402 CDS YP_002547355.1 222106564 7381446 complement(526924..527754) 1 NC_011988.1 hypothetical protein 527754 7381446 Avi_5533 Agrobacterium vitis S4 hypothetical protein YP_002547355.1 526924 R 311402 CDS YP_002547356.1 222106565 7381447 complement(527966..530242) 1 NC_011988.1 celB protein 530242 celB 7381447 celB Agrobacterium vitis S4 celB protein YP_002547356.1 527966 R 311402 CDS YP_002547357.1 222106566 7381448 complement(530317..532506) 1 NC_011988.1 cellulose synthase 532506 celA 7381448 celA Agrobacterium vitis S4 cellulose synthase YP_002547357.1 530317 R 311402 CDS YP_002547358.1 222106567 7381449 complement(532608..533687) 1 NC_011988.1 cellulose biosynthesis protein 533687 7381449 Avi_5536 Agrobacterium vitis S4 cellulose biosynthesis protein YP_002547358.1 532608 R 311402 CDS YP_002547359.1 222106568 7381450 533851..536133 1 NC_011988.1 cellulose synthesis protein 536133 celG 7381450 celG Agrobacterium vitis S4 cellulose synthesis protein YP_002547359.1 533851 D 311402 CDS YP_002547360.1 222106569 7381451 complement(536254..538287) 1 NC_011988.1 signal transduction histidine kinase 538287 7381451 Avi_5539 Agrobacterium vitis S4 signal transduction histidine kinase YP_002547360.1 536254 R 311402 CDS YP_002547361.1 222106570 7381452 538528..539763 1 NC_011988.1 sensory box histidine kinase 539763 7381452 Avi_5540 Agrobacterium vitis S4 sensory box histidine kinase YP_002547361.1 538528 D 311402 CDS YP_002547362.1 222106571 7381453 539787..540191 1 NC_011988.1 LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment; response regulator 540191 7381453 Avi_5541 Agrobacterium vitis S4 response regulator YP_002547362.1 539787 D 311402 CDS YP_002547363.1 222106572 7381454 complement(540688..541728) 1 NC_011988.1 hypothetical protein 541728 7381454 Avi_5544 Agrobacterium vitis S4 hypothetical protein YP_002547363.1 540688 R 311402 CDS YP_002547364.1 222106573 7381455 541988..545098 1 NC_011988.1 two component sensor kinase/response regulator hybrid 545098 cvgS 7381455 cvgS Agrobacterium vitis S4 two component sensor kinase/response regulator hybrid YP_002547364.1 541988 D 311402 CDS YP_002547365.1 222106574 7381456 545185..546078 1 NC_011988.1 UDP-glucose 4-epimerase 546078 galE 7381456 galE Agrobacterium vitis S4 UDP-glucose 4-epimerase YP_002547365.1 545185 D 311402 CDS YP_002547366.1 222106575 7381457 complement(546277..547398) 1 NC_011988.1 oxidoreductase 547398 7381457 Avi_5548 Agrobacterium vitis S4 oxidoreductase YP_002547366.1 546277 R 311402 CDS YP_002547367.1 222106576 7381458 complement(547439..548443) 1 NC_011988.1 NAD binding oxidoreductase 548443 7381458 Avi_5549 Agrobacterium vitis S4 NAD binding oxidoreductase YP_002547367.1 547439 R 311402 CDS YP_002547368.1 222106577 7381459 complement(548470..549993) 1 NC_011988.1 glutamine ABC transporter 549993 7381459 Avi_5550 Agrobacterium vitis S4 glutamine ABC transporter YP_002547368.1 548470 R 311402 CDS YP_002547369.1 222106578 7381460 complement(550073..550825) 1 NC_011988.1 ABC transporter substrate binding protein (glutamine) 550825 glnH 7381460 glnH Agrobacterium vitis S4 ABC transporter substrate binding protein (glutamine) YP_002547369.1 550073 R 311402 CDS YP_002547370.1 222106579 7381461 551142..552212 1 NC_011988.1 transcriptional regulator LacI family 552212 7381461 Avi_5553 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002547370.1 551142 D 311402 CDS YP_002547371.1 222106580 7381462 552490..554451 1 NC_011988.1 methyl-accepting chemotaxis protein 554451 mcpA 7381462 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002547371.1 552490 D 311402 CDS YP_002547372.1 222106581 7381463 554451..554924 1 NC_011988.1 chemotaxis protein 554924 cheW 7381463 cheW Agrobacterium vitis S4 chemotaxis protein YP_002547372.1 554451 D 311402 CDS YP_002547373.1 222106582 7381464 555203..556585 1 NC_011988.1 HlyD family secretion protein 556585 7381464 Avi_5556 Agrobacterium vitis S4 HlyD family secretion protein YP_002547373.1 555203 D 311402 CDS YP_002547374.1 222106583 7381465 556582..559680 1 NC_011988.1 AcrB/AcrD/AcrF family protein 559680 7381465 Avi_5557 Agrobacterium vitis S4 AcrB/AcrD/AcrF family protein YP_002547374.1 556582 D 311402 CDS YP_002547375.1 222106584 7381466 559677..562784 1 NC_011988.1 AcrB/AcrD/AcrF family protein 562784 7381466 Avi_5558 Agrobacterium vitis S4 AcrB/AcrD/AcrF family protein YP_002547375.1 559677 D 311402 CDS YP_002547376.1 222106585 7381467 562925..563683 1 NC_011988.1 GntR family transcriptional regulator 563683 7381467 Avi_5559 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547376.1 562925 D 311402 CDS YP_002547377.1 222106586 7381468 563807..565225 1 NC_011988.1 glycine cleavage system T protein aminomethyltransferase 565225 gcvT 7381468 gcvT Agrobacterium vitis S4 glycine cleavage system T protein aminomethyltransferase YP_002547377.1 563807 D 311402 CDS YP_002547378.1 222106587 7381469 complement(565487..567760) 1 NC_011988.1 P type cation (metal) transporter ATPase component 567760 7381469 Avi_5561 Agrobacterium vitis S4 P type cation (metal) transporter ATPase component YP_002547378.1 565487 R 311402 CDS YP_002547379.1 222106588 7381470 567832..568251 1 NC_011988.1 transcriptional regulator 568251 7381470 Avi_5562 Agrobacterium vitis S4 transcriptional regulator YP_002547379.1 567832 D 311402 CDS YP_002547380.1 222106589 7381471 complement(568359..570566) 1 NC_011988.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 570566 glgB 7381471 glgB Agrobacterium vitis S4 glycogen branching enzyme YP_002547380.1 568359 R 311402 CDS YP_002547381.1 222106590 7381472 complement(570563..573865) 1 NC_011988.1 alpha-glucosidase 573865 aglA 7381472 aglA Agrobacterium vitis S4 alpha-glucosidase YP_002547381.1 570563 R 311402 CDS YP_002547382.1 222106591 7381473 complement(573877..577125) 1 NC_011988.1 alpha-amylase-related protein 577125 7381473 Avi_5565 Agrobacterium vitis S4 alpha-amylase-related protein YP_002547382.1 573877 R 311402 CDS YP_002547383.1 222106592 7381474 577396..579210 1 NC_011988.1 4-alpha-glucanotransferase 579210 7381474 Avi_5566 Agrobacterium vitis S4 4-alpha-glucanotransferase YP_002547383.1 577396 D 311402 CDS YP_002547384.1 222106593 7381475 579676..579888 1 NC_011988.1 cold shock protein 579888 cspA 7381475 cspA Agrobacterium vitis S4 cold shock protein YP_002547384.1 579676 D 311402 CDS YP_002547385.1 222106594 7381476 complement(580017..581042) 1 NC_011988.1 hypothetical protein 581042 7381476 Avi_5568 Agrobacterium vitis S4 hypothetical protein YP_002547385.1 580017 R 311402 CDS YP_002547386.1 222106595 7381477 complement(581026..582072) 1 NC_011988.1 hypothetical protein 582072 7381477 Avi_5569 Agrobacterium vitis S4 hypothetical protein YP_002547386.1 581026 R 311402 CDS YP_002547387.1 222106596 7381478 complement(582202..583302) 1 NC_011988.1 trehalose utilization-related protein 583302 thuB 7381478 thuB Agrobacterium vitis S4 trehalose utilization-related protein YP_002547387.1 582202 R 311402 CDS YP_002547388.1 222106597 7381479 complement(583299..584084) 1 NC_011988.1 trehalose utilization-related protein 584084 thuA 7381479 thuA Agrobacterium vitis S4 trehalose utilization-related protein YP_002547388.1 583299 R 311402 CDS YP_002547389.1 222106598 7381480 584380..585093 1 NC_011988.1 GntR family transcriptional regulator 585093 7381480 Avi_5575 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547389.1 584380 D 311402 CDS YP_002547390.1 222106599 7381481 585237..586178 1 NC_011988.1 dihydrodipicolinate synthase 586178 dapA 7381481 dapA Agrobacterium vitis S4 dihydrodipicolinate synthase YP_002547390.1 585237 D 311402 CDS YP_002547391.1 222106600 7381482 complement(586203..589271) 1 NC_011988.1 alpha-mannosidase 589271 7381482 Avi_5578 Agrobacterium vitis S4 alpha-mannosidase YP_002547391.1 586203 R 311402 CDS YP_002547392.1 222106601 7381483 complement(589337..590602) 1 NC_011988.1 hypothetical protein 590602 7381483 Avi_5579 Agrobacterium vitis S4 hypothetical protein YP_002547392.1 589337 R 311402 CDS YP_002547393.1 222106602 7381484 591125..592408 1 NC_011988.1 ABC transporter/Periplasmic pectin oligomer binding protein 592408 togB 7381484 togB Agrobacterium vitis S4 ABC transporter/Periplasmic pectin oligomer binding protein YP_002547393.1 591125 D 311402 CDS YP_002547394.1 222106603 7381063 592434..593378 1 NC_011988.1 galacturonic acid ABC transporter permease 593378 togM 7381063 togM Agrobacterium vitis S4 galacturonic acid ABC transporter permease YP_002547394.1 592434 D 311402 CDS YP_002547395.1 222106604 7381064 593371..594252 1 NC_011988.1 galacturonic acid ABC transporter permease 594252 togN 7381064 togN Agrobacterium vitis S4 galacturonic acid ABC transporter permease YP_002547395.1 593371 D 311402 CDS YP_002547396.1 222106605 7381065 594281..595309 1 NC_011988.1 oxidoreductase 595309 7381065 Avi_5583 Agrobacterium vitis S4 oxidoreductase YP_002547396.1 594281 D 311402 CDS YP_002547397.1 222106606 7381066 595302..596372 1 NC_011988.1 oxidoreductase 596372 7381066 Avi_5584 Agrobacterium vitis S4 oxidoreductase YP_002547397.1 595302 D 311402 CDS YP_002547398.1 222106607 7381067 596372..597466 1 NC_011988.1 galacturonide ABC transporter ATPase/permease 597466 togA 7381067 togA Agrobacterium vitis S4 galacturonide ABC transporter ATPase/permease YP_002547398.1 596372 D 311402 CDS YP_002547399.1 222106608 7381068 597555..598229 1 NC_011988.1 hypothetical protein 598229 7381068 Avi_5586 Agrobacterium vitis S4 hypothetical protein YP_002547399.1 597555 D 311402 CDS YP_002547400.1 222106609 7381069 complement(598779..598925) 1 NC_011988.1 hypothetical protein 598925 7381069 Avi_5587 Agrobacterium vitis S4 hypothetical protein YP_002547400.1 598779 R 311402 CDS YP_002547401.1 222106610 7381070 599271..600128 1 NC_011988.1 dehydrogenase 600128 7381070 Avi_5588 Agrobacterium vitis S4 dehydrogenase YP_002547401.1 599271 D 311402 CDS YP_002547402.1 222106611 7381071 600415..602313 1 NC_011988.1 sensor histidine kinase 602313 7381071 Avi_5589 Agrobacterium vitis S4 sensor histidine kinase YP_002547402.1 600415 D 311402 CDS YP_002547403.1 222106612 7381072 602627..604069 1 NC_011988.1 hypothetical protein 604069 7381072 Avi_5592 Agrobacterium vitis S4 hypothetical protein YP_002547403.1 602627 D 311402 CDS YP_002547404.1 222106613 7381073 604066..605124 1 NC_011988.1 two component sensor kinase 605124 exsG 7381073 exsG Agrobacterium vitis S4 two component sensor kinase YP_002547404.1 604066 D 311402 CDS YP_002547405.1 222106614 7381074 complement(605184..605900) 1 NC_011988.1 hypothetical protein 605900 7381074 Avi_5594 Agrobacterium vitis S4 hypothetical protein YP_002547405.1 605184 R 311402 CDS YP_002547406.1 222106615 7381075 complement(606008..607051) 1 NC_011988.1 zinc-binding oxidoreductase 607051 7381075 Avi_5595 Agrobacterium vitis S4 zinc-binding oxidoreductase YP_002547406.1 606008 R 311402 CDS YP_002547407.1 222106616 7381076 607468..607968 1 NC_011988.1 hypothetical protein 607968 7381076 Avi_5596 Agrobacterium vitis S4 hypothetical protein YP_002547407.1 607468 D 311402 CDS YP_002547408.1 222106617 7381077 608151..608675 1 NC_011988.1 ECF family sigma factor 608675 ecfR 7381077 ecfR Agrobacterium vitis S4 ECF family sigma factor YP_002547408.1 608151 D 311402 CDS YP_002547409.1 222106618 7381078 608877..609617 1 NC_011988.1 Transcriptional regulator 609617 7381078 Avi_5598 Agrobacterium vitis S4 Transcriptional regulator YP_002547409.1 608877 D 311402 CDS YP_002547410.1 222106619 7381079 610125..611354 1 NC_011988.1 MFS permease 611354 7381079 Avi_5599 Agrobacterium vitis S4 MFS permease YP_002547410.1 610125 D 311402 CDS YP_002547411.1 222106620 7381080 611477..612628 1 NC_011988.1 hypothetical protein 612628 7381080 Avi_5600 Agrobacterium vitis S4 hypothetical protein YP_002547411.1 611477 D 311402 CDS YP_002547412.1 222106621 7381081 613415..613921 1 NC_011988.1 hypothetical protein 613921 7381081 Avi_5601 Agrobacterium vitis S4 hypothetical protein YP_002547412.1 613415 D 311402 CDS YP_002547413.1 222106622 7381082 613931..615901 1 NC_011988.1 GGDEF family protein 615901 7381082 Avi_5602 Agrobacterium vitis S4 GGDEF family protein YP_002547413.1 613931 D 311402 CDS YP_002547414.1 222106623 7381083 616068..616898 1 NC_011988.1 metal dependent beta lactamase 616898 7381083 Avi_5603 Agrobacterium vitis S4 metal dependent beta lactamase YP_002547414.1 616068 D 311402 CDS YP_002547415.1 222106624 7381084 617045..618760 1 NC_011988.1 adenylate cyclase 618760 cyaA 7381084 cyaA Agrobacterium vitis S4 adenylate cyclase YP_002547415.1 617045 D 311402 CDS YP_002547416.1 222106625 7381085 618953..620305 1 NC_011988.1 adenylate cyclase 620305 cyaA 7381085 cyaA Agrobacterium vitis S4 adenylate cyclase YP_002547416.1 618953 D 311402 CDS YP_002547417.1 222106626 7381086 620486..623200 1 NC_011988.1 ABC transporter ATPase 623200 7381086 Avi_5606 Agrobacterium vitis S4 ABC transporter ATPase YP_002547417.1 620486 D 311402 CDS YP_002547418.1 222106627 7381087 623236..623700 1 NC_011988.1 cAMP-dependent protein kinase regulatory subunit 623700 7381087 Avi_5607 Agrobacterium vitis S4 cAMP-dependent protein kinase regulatory subunit YP_002547418.1 623236 D 311402 CDS YP_002547419.1 222106628 7381088 623859..624698 1 NC_011988.1 extragenic suppressor protein SuhB 624698 suhB 7381088 suhB Agrobacterium vitis S4 extragenic suppressor protein SuhB YP_002547419.1 623859 D 311402 CDS YP_002547420.1 222106629 7381089 complement(624677..625546) 1 NC_011988.1 hypothetical protein 625546 7381089 Avi_5609 Agrobacterium vitis S4 hypothetical protein YP_002547420.1 624677 R 311402 CDS YP_002547421.1 222106630 7381090 complement(625533..626615) 1 NC_011988.1 ABC transporter ATPase 626615 7381090 Avi_5610 Agrobacterium vitis S4 ABC transporter ATPase YP_002547421.1 625533 R 311402 CDS YP_002547422.1 222106631 7381091 complement(626659..627468) 1 NC_011988.1 sugar ABC transporter permease 627468 7381091 Avi_5611 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547422.1 626659 R 311402 CDS YP_002547423.1 222106632 7381092 complement(627479..628369) 1 NC_011988.1 spermidine/putrescine ABC transporter permease 628369 7381092 Avi_5612 Agrobacterium vitis S4 spermidine/putrescine ABC transporter permease YP_002547423.1 627479 R 311402 CDS YP_002547424.1 222106633 7381093 complement(628369..629556) 1 NC_011988.1 ABC transporter substrate-binding protein 629556 7381093 Avi_5613 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002547424.1 628369 R 311402 CDS YP_002547425.1 222106634 7381094 629788..630345 1 NC_011988.1 hypothetical protein 630345 7381094 Avi_5614 Agrobacterium vitis S4 hypothetical protein YP_002547425.1 629788 D 311402 CDS YP_002547426.1 222106635 7381095 complement(630359..631372) 1 NC_011988.1 mannonate dehydratase 631372 uxuA 7381095 uxuA Agrobacterium vitis S4 mannonate dehydratase YP_002547426.1 630359 R 311402 CDS YP_002547427.1 222106636 7381096 632154..633452 1 NC_011988.1 flavin-containing amine oxidase 633452 7381096 Avi_5617 Agrobacterium vitis S4 flavin-containing amine oxidase YP_002547427.1 632154 D 311402 CDS YP_002547428.1 222106637 7381097 633816..634274 1 NC_011988.1 hypothetical protein 634274 7381097 Avi_5618 Agrobacterium vitis S4 hypothetical protein YP_002547428.1 633816 D 311402 CDS YP_002547429.1 222106638 7381098 634324..634605 1 NC_011988.1 polyketide synthase 634605 7381098 Avi_5619 Agrobacterium vitis S4 polyketide synthase YP_002547429.1 634324 D 311402 CDS YP_002547430.1 222106639 7381099 634711..635541 1 NC_011988.1 siimilar to amino acid adenylation protein of Anabaena variabilis; Amino acid adenylation protein 635541 7381099 Avi_5621 Agrobacterium vitis S4 Amino acid adenylation protein YP_002547430.1 634711 D 311402 CDS YP_002547431.1 222106640 7381100 635579..642925 1 NC_011988.1 polyketide synthase 642925 7381100 Avi_5624 Agrobacterium vitis S4 polyketide synthase YP_002547431.1 635579 D 311402 CDS YP_002547432.1 222106641 7381101 642922..650028 1 NC_011988.1 polyketide synthase 650028 7381101 Avi_5625 Agrobacterium vitis S4 polyketide synthase YP_002547432.1 642922 D 311402 CDS YP_002547433.1 222106642 7381102 650044..651624 1 NC_011988.1 hypothetical protein 651624 7381102 Avi_5626 Agrobacterium vitis S4 hypothetical protein YP_002547433.1 650044 D 311402 CDS YP_002547434.1 222106643 7381103 651663..653309 1 NC_011988.1 similar to Burkholderia pseudomallei YP_111280; Acyl-CoA dehydrogenase 653309 7381103 Avi_5627 Agrobacterium vitis S4 Acyl-CoA dehydrogenase YP_002547434.1 651663 D 311402 CDS YP_002547435.1 222106644 7381104 653387..655198 1 NC_011988.1 Acyl-CoA dehydrogenase 655198 7381104 Avi_5628 Agrobacterium vitis S4 Acyl-CoA dehydrogenase YP_002547435.1 653387 D 311402 CDS YP_002547436.1 222106645 7381105 complement(655247..656191) 1 NC_011988.1 formamidase 656191 7381105 Avi_5629 Agrobacterium vitis S4 formamidase YP_002547436.1 655247 R 311402 CDS YP_002547437.1 222106646 7381106 complement(656209..657195) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 657195 7381106 Avi_5630 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547437.1 656209 R 311402 CDS YP_002547438.1 222106647 7381107 complement(657192..658217) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 658217 7381107 Avi_5631 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547438.1 657192 R 311402 CDS YP_002547439.1 222106648 7381108 complement(658220..659191) 1 NC_011988.1 peptide ABC transporter permease 659191 7381108 Avi_5632 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547439.1 658220 R 311402 CDS YP_002547440.1 222106649 7381109 complement(659203..660255) 1 NC_011988.1 peptide ABC transporter permease 660255 dppC 7381109 dppC Agrobacterium vitis S4 peptide ABC transporter permease YP_002547440.1 659203 R 311402 CDS YP_002547441.1 222106650 7381110 complement(660333..662039) 1 NC_011988.1 hypothetical protein 662039 7381110 Avi_5634 Agrobacterium vitis S4 hypothetical protein YP_002547441.1 660333 R 311402 CDS YP_002547442.1 222106651 7381111 complement(662095..662988) 1 NC_011988.1 hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 662988 7381111 Avi_5637 Agrobacterium vitis S4 hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_002547442.1 662095 R 311402 CDS YP_002547443.1 222106652 7381112 complement(663020..663625) 1 NC_011988.1 Response regulator antiterminator domain-containing protein 663625 7381112 Avi_5638 Agrobacterium vitis S4 Response regulator antiterminator domain-containing protein YP_002547443.1 663020 R 311402 CDS YP_002547444.1 222106653 7381113 complement(663622..664854) 1 NC_011988.1 ABC transporter substrate-binding protein 664854 7381113 Avi_5639 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002547444.1 663622 R 311402 CDS YP_002547445.1 222106654 7381114 665201..666103 1 NC_011988.1 LysR family transcriptional regulator 666103 7381114 Avi_5640 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547445.1 665201 D 311402 CDS YP_002547446.1 222106655 7381115 666247..667773 1 NC_011988.1 ABC transporter substrate binding protein (oligopeptide) 667773 7381115 Avi_5641 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002547446.1 666247 D 311402 CDS YP_002547447.1 222106656 7381116 667892..668842 1 NC_011988.1 peptide ABC transporter permease 668842 7381116 Avi_5642 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547447.1 667892 D 311402 CDS YP_002547448.1 222106657 7381117 668839..669705 1 NC_011988.1 ABC transporter 669705 7381117 Avi_5643 Agrobacterium vitis S4 ABC transporter YP_002547448.1 668839 D 311402 CDS YP_002547449.1 222106658 7381118 669702..670697 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 670697 7381118 Avi_5644 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547449.1 669702 D 311402 CDS YP_002547450.1 222106659 7381119 670697..671689 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 671689 7381119 Avi_5646 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547450.1 670697 D 311402 CDS YP_002547451.1 222106660 7381120 671716..673110 1 NC_011988.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 673110 gatA 7381120 gatA Agrobacterium vitis S4 amidase YP_002547451.1 671716 D 311402 CDS YP_002547452.1 222106661 7381121 complement(673127..674920) 1 NC_011988.1 catalyzes the hydrolysis of allophanate; allophanate hydrolase 674920 7381121 Avi_5649 Agrobacterium vitis S4 allophanate hydrolase YP_002547452.1 673127 R 311402 CDS YP_002547453.1 222106662 7381122 complement(674924..675268) 1 NC_011988.1 Allophanate hydrolase 675268 7381122 Avi_5650 Agrobacterium vitis S4 Allophanate hydrolase YP_002547453.1 674924 R 311402 CDS YP_002547454.1 222106663 7381123 complement(675261..675932) 1 NC_011988.1 hypothetical protein 675932 7381123 Avi_5651 Agrobacterium vitis S4 hypothetical protein YP_002547454.1 675261 R 311402 CDS YP_002547455.1 222106664 7381124 complement(675929..677455) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide) 677455 7381124 Avi_5652 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide) YP_002547455.1 675929 R 311402 CDS YP_002547456.1 222106665 7381125 complement(677452..678513) 1 NC_011988.1 cyanuric acid amidohydrolase 678513 7381125 Avi_5653 Agrobacterium vitis S4 cyanuric acid amidohydrolase YP_002547456.1 677452 R 311402 CDS YP_002547457.1 222106666 7381126 complement(678510..679211) 1 NC_011988.1 hypothetical protein 679211 7381126 Avi_5654 Agrobacterium vitis S4 hypothetical protein YP_002547457.1 678510 R 311402 CDS YP_002547458.1 222106667 7381127 complement(679220..680236) 1 NC_011988.1 formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate; formamidase 680236 amiF 7381127 amiF Agrobacterium vitis S4 formamidase YP_002547458.1 679220 R 311402 CDS YP_002547459.1 222106668 7381128 complement(680253..681179) 1 NC_011988.1 sugar ABC transporter permease 681179 7381128 Avi_5656 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547459.1 680253 R 311402 CDS YP_002547460.1 222106669 7381129 complement(681179..682357) 1 NC_011988.1 sugar ABC transporter permease 682357 7381129 Avi_5657 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547460.1 681179 R 311402 CDS YP_002547461.1 222106670 7381130 complement(682362..683630) 1 NC_011988.1 lipoprotein 683630 7381130 Avi_5659 Agrobacterium vitis S4 lipoprotein YP_002547461.1 682362 R 311402 CDS YP_002547462.1 222106671 7381131 683830..684513 1 NC_011988.1 GntR family transcriptional regulator 684513 7381131 Avi_5660 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547462.1 683830 D 311402 CDS YP_002547463.1 222106672 7381132 complement(684532..686193) 1 NC_011988.1 ABC transporter ATPase 686193 7381132 Avi_5661 Agrobacterium vitis S4 ABC transporter ATPase YP_002547463.1 684532 R 311402 CDS YP_002547464.1 222106673 7381133 complement(686190..687065) 1 NC_011988.1 ABC transporter permease 687065 7381133 Avi_5662 Agrobacterium vitis S4 ABC transporter permease YP_002547464.1 686190 R 311402 CDS YP_002547465.1 222106674 7381134 complement(687062..688018) 1 NC_011988.1 ABC transporter permease 688018 7381134 Avi_5663 Agrobacterium vitis S4 ABC transporter permease YP_002547465.1 687062 R 311402 CDS YP_002547466.1 222106675 7381135 complement(688199..689812) 1 NC_011988.1 ABC transporter substrate binding protein (oligopeptide) 689812 7381135 Avi_5666 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002547466.1 688199 R 311402 CDS YP_002547467.1 222106676 7381136 complement(689895..690614) 1 NC_011988.1 2-haloalkanoic acid dehalogenase 690614 hadL 7381136 hadL Agrobacterium vitis S4 2-haloalkanoic acid dehalogenase YP_002547467.1 689895 R 311402 CDS YP_002547468.1 222106677 7381137 complement(690860..692233) 1 NC_011988.1 hypothetical protein 692233 bioA 7381137 bioA Agrobacterium vitis S4 hypothetical protein YP_002547468.1 690860 R 311402 CDS YP_002547469.1 222106678 7381138 complement(692252..693097) 1 NC_011988.1 hypothetical protein 693097 7381138 Avi_5669 Agrobacterium vitis S4 hypothetical protein YP_002547469.1 692252 R 311402 CDS YP_002547470.1 222106679 7381139 693473..694141 1 NC_011988.1 haloacid dehalogenase type II 694141 dehII 7381139 dehII Agrobacterium vitis S4 haloacid dehalogenase type II YP_002547470.1 693473 D 311402 CDS YP_002547471.1 222106680 7381140 694145..695419 1 NC_011988.1 oxidoreductase 695419 ordL 7381140 ordL Agrobacterium vitis S4 oxidoreductase YP_002547471.1 694145 D 311402 CDS YP_002547472.1 222106681 7381141 695605..695808 1 NC_011988.1 hypothetical protein 695808 7381141 Avi_5672 Agrobacterium vitis S4 hypothetical protein YP_002547472.1 695605 D 311402 CDS YP_002547473.1 222106682 7381142 complement(695899..697329) 1 NC_011988.1 aldehyde dehydrogenase 697329 7381142 Avi_5673 Agrobacterium vitis S4 aldehyde dehydrogenase YP_002547473.1 695899 R 311402 CDS YP_002547474.1 222106683 7381143 complement(697387..697743) 1 NC_011988.1 hypothetical protein 697743 7381143 Avi_5674 Agrobacterium vitis S4 hypothetical protein YP_002547474.1 697387 R 311402 CDS YP_002547475.1 222106684 7381144 complement(697759..698889) 1 NC_011988.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 698889 argE 7381144 argE Agrobacterium vitis S4 acetylornithine deacetylase YP_002547475.1 697759 R 311402 CDS YP_002547476.1 222106685 7381145 complement(699084..699689) 1 NC_011988.1 regulatory protein 699689 7381145 Avi_5677 Agrobacterium vitis S4 regulatory protein YP_002547476.1 699084 R 311402 CDS YP_002547477.1 222106686 7381568 699866..701026 1 NC_011988.1 RND multidrug efflux membrane permease 701026 7381568 Avi_5678 Agrobacterium vitis S4 RND multidrug efflux membrane permease YP_002547477.1 699866 D 311402 CDS YP_002547478.1 222106687 7381569 701030..704185 1 NC_011988.1 AcrB/AcrD/AcrF family protein 704185 7381569 Avi_5679 Agrobacterium vitis S4 AcrB/AcrD/AcrF family protein YP_002547478.1 701030 D 311402 CDS YP_002547479.1 222106688 7381570 704439..705971 1 NC_011988.1 propionyl-CoA carboxylase 705971 7381570 Avi_5680 Agrobacterium vitis S4 propionyl-CoA carboxylase YP_002547479.1 704439 D 311402 CDS YP_002547480.1 222106689 7381571 706051..706428 1 NC_011988.1 hypothetical protein 706428 7381571 Avi_5681 Agrobacterium vitis S4 hypothetical protein YP_002547480.1 706051 D 311402 CDS YP_002547481.1 222106690 7381572 706486..706842 1 NC_011988.1 hypothetical protein 706842 7381572 Avi_5682 Agrobacterium vitis S4 hypothetical protein YP_002547481.1 706486 D 311402 CDS YP_002547482.1 222106691 7381573 706845..708845 1 NC_011988.1 acetyl-CoA carboxylase biotin carboxylase 708845 accC 7381573 accC Agrobacterium vitis S4 acetyl-CoA carboxylase biotin carboxylase YP_002547482.1 706845 D 311402 CDS YP_002547483.1 222106692 7381574 complement(708887..709237) 1 NC_011988.1 KluB 709237 7381574 Avi_5684 Agrobacterium vitis S4 KluB YP_002547483.1 708887 R 311402 CDS YP_002547484.1 222106693 7381575 complement(709239..709508) 1 NC_011988.1 hypothetical protein 709508 7381575 Avi_5686 Agrobacterium vitis S4 hypothetical protein YP_002547484.1 709239 R 311402 CDS YP_002547485.1 222106694 7381576 709627..711765 1 NC_011988.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 711765 mutA 7381576 mutA Agrobacterium vitis S4 methylmalonyl-CoA mutase YP_002547485.1 709627 D 311402 CDS YP_002547486.1 222106695 7381577 711870..712334 1 NC_011988.1 transcriptional regulator 712334 7381577 Avi_5688 Agrobacterium vitis S4 transcriptional regulator YP_002547486.1 711870 D 311402 CDS YP_002547487.1 222106696 7381578 712340..714415 1 NC_011988.1 hypothetical protein 714415 7381578 Avi_5689 Agrobacterium vitis S4 hypothetical protein YP_002547487.1 712340 D 311402 CDS YP_002547488.1 222106697 7381579 714627..715508 1 NC_011988.1 HlyD family secretion protein 715508 7381579 Avi_5690 Agrobacterium vitis S4 HlyD family secretion protein YP_002547488.1 714627 D 311402 CDS YP_002547489.1 222106698 7381580 complement(715681..716523) 1 NC_011988.1 fumarylacetoacetate (FAA) hydrolase family protein 716523 7381580 Avi_5691 Agrobacterium vitis S4 fumarylacetoacetate (FAA) hydrolase family protein YP_002547489.1 715681 R 311402 CDS YP_002547490.1 222106699 7381581 complement(716568..717302) 1 NC_011988.1 oxidoreductase 717302 7381581 Avi_5692 Agrobacterium vitis S4 oxidoreductase YP_002547490.1 716568 R 311402 CDS YP_002547491.1 222106700 7381582 complement(717517..718653) 1 NC_011988.1 Non-ribosomal peptide synthetase domain-containing protein 718653 7381582 Avi_5693 Agrobacterium vitis S4 Non-ribosomal peptide synthetase domain-containing protein YP_002547491.1 717517 R 311402 CDS YP_002547492.1 222106701 7381583 complement(718853..719620) 1 NC_011988.1 hypothetical protein 719620 7381583 Avi_5694 Agrobacterium vitis S4 hypothetical protein YP_002547492.1 718853 R 311402 CDS YP_002547493.1 222106702 7381584 complement(719755..720504) 1 NC_011988.1 calcium-binding protein 720504 7381584 Avi_5696 Agrobacterium vitis S4 calcium-binding protein YP_002547493.1 719755 R 311402 CDS YP_002547494.1 222106703 7381585 complement(720612..722318) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 722318 7381585 Avi_5697 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002547494.1 720612 R 311402 CDS YP_002547495.1 222106704 7381586 complement(722328..723491) 1 NC_011988.1 peptide ABC transporter permease 723491 7381586 Avi_5698 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547495.1 722328 R 311402 CDS YP_002547496.1 222106705 7381587 complement(723488..724471) 1 NC_011988.1 peptide ABC transporter permease 724471 7381587 Avi_5699 Agrobacterium vitis S4 peptide ABC transporter permease YP_002547496.1 723488 R 311402 CDS YP_002547497.1 222106706 7381588 complement(724690..726606) 1 NC_011988.1 ABC transporter substrate binding protein (oligopeptide) 726606 7381588 Avi_5700 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002547497.1 724690 R 311402 CDS YP_002547498.1 222106707 7381589 complement(726718..727623) 1 NC_011988.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 727623 7381589 Avi_5701 Agrobacterium vitis S4 5-dehydro-4-deoxyglucarate dehydratase YP_002547498.1 726718 R 311402 CDS YP_002547499.1 222106708 7381590 727834..728574 1 NC_011988.1 GntR family transcriptional regulator 728574 7381590 Avi_5703 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547499.1 727834 D 311402 CDS YP_002547500.1 222106709 7381591 728657..730036 1 NC_011988.1 hypothetical protein 730036 dapE 7381591 dapE Agrobacterium vitis S4 hypothetical protein YP_002547500.1 728657 D 311402 CDS YP_002547501.1 222106710 7381592 730153..731040 1 NC_011988.1 hypothetical protein 731040 celI 7381592 celI Agrobacterium vitis S4 hypothetical protein YP_002547501.1 730153 D 311402 CDS YP_002547502.1 222106711 7381593 731250..732773 1 NC_011988.1 alpha-L-arabinofuranosidase 732773 7381593 Avi_5707 Agrobacterium vitis S4 alpha-L-arabinofuranosidase YP_002547502.1 731250 D 311402 CDS YP_002547503.1 222106712 7381594 732821..733921 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar) 733921 7381594 Avi_5708 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002547503.1 732821 D 311402 CDS YP_002547504.1 222106713 7381595 733914..734864 1 NC_011988.1 sugar ABC transporter permease 734864 7381595 Avi_5709 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547504.1 733914 D 311402 CDS YP_002547505.1 222106714 7381596 734861..735703 1 NC_011988.1 sugar ABC transporter permease 735703 7381596 Avi_5710 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547505.1 734861 D 311402 CDS YP_002547506.1 222106715 7381597 735746..737092 1 NC_011988.1 sugar uptake ABC transporter periplasmic solute-binding protein precursor 737092 7381597 Avi_5711 Agrobacterium vitis S4 sugar uptake ABC transporter periplasmic solute-binding protein precursor YP_002547506.1 735746 D 311402 CDS YP_002547507.1 222106716 7381598 complement(737142..737618) 1 NC_011988.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; riboflavin synthase subunit beta 737618 7381598 Avi_5713 Agrobacterium vitis S4 riboflavin synthase subunit beta YP_002547507.1 737142 R 311402 CDS YP_002547508.1 222106717 7381599 737732..737953 1 NC_011988.1 hypothetical protein 737953 7381599 Avi_5715 Agrobacterium vitis S4 hypothetical protein YP_002547508.1 737732 D 311402 CDS YP_002547509.1 222106718 7381600 complement(738115..739014) 1 NC_011988.1 LysR family transcriptional regulator 739014 7381600 Avi_5716 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547509.1 738115 R 311402 CDS YP_002547510.1 222106719 7381601 739229..740512 1 NC_011988.1 oxidoreductase 740512 ordL 7381601 ordL Agrobacterium vitis S4 oxidoreductase YP_002547510.1 739229 D 311402 CDS YP_002547511.1 222106720 7381602 740572..742107 1 NC_011988.1 aldehyde dehydrogenase 742107 7381602 Avi_5719 Agrobacterium vitis S4 aldehyde dehydrogenase YP_002547511.1 740572 D 311402 CDS YP_002547512.1 222106721 7381603 complement(742158..743030) 1 NC_011988.1 oxidoredutase 743030 7381603 Avi_5720 Agrobacterium vitis S4 oxidoredutase YP_002547512.1 742158 R 311402 CDS YP_002547513.1 222106722 7381604 complement(743027..743446) 1 NC_011988.1 hypothetical protein 743446 7381604 Avi_5722 Agrobacterium vitis S4 hypothetical protein YP_002547513.1 743027 R 311402 CDS YP_002547514.1 222106723 7381605 743611..744501 1 NC_011988.1 gluconolactonase precursor 744501 7381605 Avi_5723 Agrobacterium vitis S4 gluconolactonase precursor YP_002547514.1 743611 D 311402 CDS YP_002547515.1 222106724 7381606 complement(744522..745799) 1 NC_011988.1 related to UDP-glucuronosyltransferase; Glycosyl transferase 745799 7381606 Avi_5724 Agrobacterium vitis S4 Glycosyl transferase YP_002547515.1 744522 R 311402 CDS YP_002547516.1 222106725 7381607 complement(746023..746946) 1 NC_011988.1 DNA-binding HTH domain-containing protein 746946 7381607 Avi_5725 Agrobacterium vitis S4 DNA-binding HTH domain-containing protein YP_002547516.1 746023 R 311402 CDS YP_002547517.1 222106726 7381608 complement(747479..748729) 1 NC_011988.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 748729 lysA 7381608 lysA Agrobacterium vitis S4 diaminopimelate decarboxylase YP_002547517.1 747479 R 311402 CDS YP_002547518.1 222106727 7381609 complement(748920..750107) 1 NC_011988.1 hypothetical protein 750107 mdeA 7381609 mdeA Agrobacterium vitis S4 hypothetical protein YP_002547518.1 748920 R 311402 CDS YP_002547519.1 222106728 7381610 complement(750104..751516) 1 NC_011988.1 hypothetical protein 751516 7381610 Avi_5728 Agrobacterium vitis S4 hypothetical protein YP_002547519.1 750104 R 311402 CDS YP_002547520.1 222106729 7381611 complement(751516..752565) 1 NC_011988.1 acetylase 752565 7381611 Avi_5729 Agrobacterium vitis S4 acetylase YP_002547520.1 751516 R 311402 CDS YP_002547521.1 222106730 7381612 753003..756986 1 NC_011988.1 peptide synthetase 756986 7381612 Avi_5730 Agrobacterium vitis S4 peptide synthetase YP_002547521.1 753003 D 311402 CDS YP_002547522.1 222106731 7381613 757042..758358 1 NC_011988.1 L-ornithine N5-oxygenase 758358 7381613 Avi_5731 Agrobacterium vitis S4 L-ornithine N5-oxygenase YP_002547522.1 757042 D 311402 CDS YP_002547523.1 222106732 7381614 758734..759357 1 NC_011988.1 sigma factor 759357 pfrI 7381614 pfrI Agrobacterium vitis S4 sigma factor YP_002547523.1 758734 D 311402 CDS YP_002547524.1 222106733 7381615 759503..759976 1 NC_011988.1 acetylase 759976 7381615 Avi_5733 Agrobacterium vitis S4 acetylase YP_002547524.1 759503 D 311402 CDS YP_002547525.1 222106734 7381616 complement(760027..760812) 1 NC_011988.1 iron reductase 760812 7381616 Avi_5734 Agrobacterium vitis S4 iron reductase YP_002547525.1 760027 R 311402 CDS YP_002547526.1 222106735 7381617 complement(760929..761864) 1 NC_011988.1 AraC family transcriptional regulator 761864 7381617 Avi_5735 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002547526.1 760929 R 311402 CDS YP_002547527.1 222106736 7381618 762130..763362 1 NC_011988.1 ABC transporter substrate-binding protein 763362 7381618 Avi_5736 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002547527.1 762130 D 311402 CDS YP_002547528.1 222106737 7381619 763476..764384 1 NC_011988.1 sugar ABC transporter permease 764384 7381619 Avi_5738 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547528.1 763476 D 311402 CDS YP_002547529.1 222106738 7381620 764381..765235 1 NC_011988.1 ABC transporter permease 765235 7381620 Avi_5739 Agrobacterium vitis S4 ABC transporter permease YP_002547529.1 764381 D 311402 CDS YP_002547530.1 222106739 7381621 765232..767337 1 NC_011988.1 Alpha-galactosidase 767337 7381621 Avi_5740 Agrobacterium vitis S4 Alpha-galactosidase YP_002547530.1 765232 D 311402 CDS YP_002547531.1 222106740 7381622 767330..768427 1 NC_011988.1 ABC transporter ATPase 768427 7381622 Avi_5741 Agrobacterium vitis S4 ABC transporter ATPase YP_002547531.1 767330 D 311402 CDS YP_002547532.1 222106741 7381623 768427..770355 1 NC_011988.1 beta-galactosidase 770355 7381623 Avi_5742 Agrobacterium vitis S4 beta-galactosidase YP_002547532.1 768427 D 311402 CDS YP_002547533.1 222106742 7381624 complement(770519..771049) 1 NC_011988.1 hypothetical protein 771049 7381624 Avi_5743 Agrobacterium vitis S4 hypothetical protein YP_002547533.1 770519 R 311402 CDS YP_002547534.1 222106743 7381625 complement(771042..774005) 1 NC_011988.1 sarcosine oxidase alpha subunit 774005 soxA 7381625 soxA Agrobacterium vitis S4 sarcosine oxidase alpha subunit YP_002547534.1 771042 R 311402 CDS YP_002547535.1 222106744 7381626 complement(774002..774274) 1 NC_011988.1 sarcosine oxidase delta subunit 774274 soxD 7381626 soxD Agrobacterium vitis S4 sarcosine oxidase delta subunit YP_002547535.1 774002 R 311402 CDS YP_002547536.1 222106745 7381627 complement(774286..775536) 1 NC_011988.1 sarcosine oxidase beta subunit 775536 soxB 7381627 soxB Agrobacterium vitis S4 sarcosine oxidase beta subunit YP_002547536.1 774286 R 311402 CDS YP_002547537.1 222106746 7381628 775665..776618 1 NC_011988.1 AraC family transcriptional regulator 776618 glxA 7381628 glxA Agrobacterium vitis S4 AraC family transcriptional regulator YP_002547537.1 775665 D 311402 CDS YP_002547538.1 222106747 7381629 776659..777318 1 NC_011988.1 transcriptional regulator 777318 7381629 Avi_5748 Agrobacterium vitis S4 transcriptional regulator YP_002547538.1 776659 D 311402 CDS YP_002547539.1 222106748 7381630 777408..778313 1 NC_011988.1 amidophosphoribosyltransferase 778313 purF 7381630 purF Agrobacterium vitis S4 amidophosphoribosyltransferase YP_002547539.1 777408 D 311402 CDS YP_002547540.1 222106749 7381631 778324..779010 1 NC_011988.1 formyl-methanofuran dehydrogenase 779010 fwdC 7381631 fwdC Agrobacterium vitis S4 formyl-methanofuran dehydrogenase YP_002547540.1 778324 D 311402 CDS YP_002547541.1 222106750 7381632 779095..780423 1 NC_011988.1 glutamate synthase large subunit 780423 gltB 7381632 gltB Agrobacterium vitis S4 glutamate synthase large subunit YP_002547541.1 779095 D 311402 CDS YP_002547542.1 222106751 7381633 780505..781812 1 NC_011988.1 glutamine synthetase 781812 glnA 7381633 glnA Agrobacterium vitis S4 glutamine synthetase YP_002547542.1 780505 D 311402 CDS YP_002547543.1 222106752 7381634 complement(781855..783201) 1 NC_011988.1 MFS permease 783201 tphA 7381634 tphA Agrobacterium vitis S4 MFS permease YP_002547543.1 781855 R 311402 CDS YP_002547544.1 222106753 7381635 complement(783302..784462) 1 NC_011988.1 L-lactate dehydrogenase 784462 lldA 7381635 lldA Agrobacterium vitis S4 L-lactate dehydrogenase YP_002547544.1 783302 R 311402 CDS YP_002547545.1 222106754 7381636 complement(784606..785883) 1 NC_011988.1 ABC transporter substrate binding protein (sugar) 785883 7381636 Avi_5755 Agrobacterium vitis S4 ABC transporter substrate binding protein (sugar) YP_002547545.1 784606 R 311402 CDS YP_002547546.1 222106755 7381637 786074..788590 1 NC_011988.1 hypothetical protein 788590 7381637 Avi_5757 Agrobacterium vitis S4 hypothetical protein YP_002547546.1 786074 D 311402 CDS YP_002547547.1 222106756 7381638 788603..789697 1 NC_011988.1 hypothetical protein 789697 7381638 Avi_5758 Agrobacterium vitis S4 hypothetical protein YP_002547547.1 788603 D 311402 CDS YP_002547548.1 222106757 7381639 789772..791022 1 NC_011988.1 polygalacturonase 791022 7381639 Avi_5759 Agrobacterium vitis S4 polygalacturonase YP_002547548.1 789772 D 311402 CDS YP_002547549.1 222106758 7381640 791046..792164 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar) 792164 7381640 Avi_5760 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002547549.1 791046 D 311402 CDS YP_002547550.1 222106759 7381641 792206..793150 1 NC_011988.1 sugar ABC transporter permease 793150 7381641 Avi_5762 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547550.1 792206 D 311402 CDS YP_002547551.1 222106760 7381642 793152..794204 1 NC_011988.1 sugar ABC transporter permease 794204 7381642 Avi_5763 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547551.1 793152 D 311402 CDS YP_002547552.1 222106761 7381643 complement(794219..795232) 1 NC_011988.1 transcriptional regulator LacI family 795232 purR 7381643 purR Agrobacterium vitis S4 transcriptional regulator LacI family YP_002547552.1 794219 R 311402 CDS YP_002547553.1 222106762 7381644 complement(795318..796454) 1 NC_011988.1 Patatin-like phospholipase domain-containing protein 796454 7381644 Avi_5766 Agrobacterium vitis S4 Patatin-like phospholipase domain-containing protein YP_002547553.1 795318 R 311402 CDS YP_002547554.1 222106763 7381645 complement(796612..797640) 1 NC_011988.1 alcohol dehydrogenase 797640 adhP 7381645 adhP Agrobacterium vitis S4 alcohol dehydrogenase YP_002547554.1 796612 R 311402 CDS YP_002547555.1 222106764 7381646 complement(797782..798669) 1 NC_011988.1 carboxymethylenebutenolidase 798669 dlhH 7381646 dlhH Agrobacterium vitis S4 carboxymethylenebutenolidase YP_002547555.1 797782 R 311402 CDS YP_002547556.1 222106765 7381647 complement(798786..800384) 1 NC_011988.1 inosine-5`-monophosphate dehydrogenase 800384 guaB 7381647 guaB Agrobacterium vitis S4 inosine-5`-monophosphate dehydrogenase YP_002547556.1 798786 R 311402 CDS YP_002547557.1 222106766 7381648 complement(800441..801364) 1 NC_011988.1 LysR family transcriptional regulator 801364 oxyR 7381648 oxyR Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547557.1 800441 R 311402 CDS YP_002547558.1 222106767 7381649 801869..802495 1 NC_011988.1 TetR family transcriptional regulator 802495 7381649 Avi_5773 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002547558.1 801869 D 311402 CDS YP_002547559.1 222106768 7380732 complement(802548..803546) 1 NC_011988.1 LysR family transcriptional regulator 803546 7380732 Avi_5774 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547559.1 802548 R 311402 CDS YP_002547560.1 222106769 7380573 803728..804027 1 NC_011988.1 hypothetical protein 804027 7380573 Avi_5775 Agrobacterium vitis S4 hypothetical protein YP_002547560.1 803728 D 311402 CDS YP_002547561.1 222106770 7380574 complement(804163..805062) 1 NC_011988.1 hypothetical protein 805062 7380574 Avi_5777 Agrobacterium vitis S4 hypothetical protein YP_002547561.1 804163 R 311402 CDS YP_002547562.1 222106771 7380575 complement(805335..806708) 1 NC_011988.1 glutamate--cysteine ligase 806708 7380575 Avi_5779 Agrobacterium vitis S4 glutamate--cysteine ligase YP_002547562.1 805335 R 311402 CDS YP_002547563.1 222106772 7380576 complement(806887..807624) 1 NC_011988.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 807624 7380576 Avi_5780 Agrobacterium vitis S4 16S ribosomal RNA methyltransferase RsmE YP_002547563.1 806887 R 311402 CDS YP_002547564.1 222106773 7380577 complement(807644..809146) 1 NC_011988.1 phosphate permease 809146 pit 7380577 pit Agrobacterium vitis S4 phosphate permease YP_002547564.1 807644 R 311402 CDS YP_002547565.1 222106774 7380578 complement(809494..809982) 1 NC_011988.1 NTP pyrophosphohydrolase MutT family 809982 7380578 Avi_5783 Agrobacterium vitis S4 NTP pyrophosphohydrolase MutT family YP_002547565.1 809494 R 311402 CDS YP_002547566.1 222106775 7380579 810440..811846 1 NC_011988.1 hypothetical protein 811846 7380579 Avi_5784 Agrobacterium vitis S4 hypothetical protein YP_002547566.1 810440 D 311402 CDS YP_002547567.1 222106776 7380580 811997..813430 1 NC_011988.1 glycolate oxidase subunit GlcD 813430 glcD 7380580 glcD Agrobacterium vitis S4 glycolate oxidase subunit GlcD YP_002547567.1 811997 D 311402 CDS YP_002547568.1 222106777 7380581 813427..814644 1 NC_011988.1 glycolate oxidase subunit 814644 glcE 7380581 glcE Agrobacterium vitis S4 glycolate oxidase subunit YP_002547568.1 813427 D 311402 CDS YP_002547569.1 222106778 7380582 814683..815978 1 NC_011988.1 glycolate oxidase iron-sulfur subunit 815978 glcF 7380582 glcF Agrobacterium vitis S4 glycolate oxidase iron-sulfur subunit YP_002547569.1 814683 D 311402 CDS YP_002547570.1 222106779 7380583 816118..816528 1 NC_011988.1 hypothetical protein 816528 7380583 Avi_5790 Agrobacterium vitis S4 hypothetical protein YP_002547570.1 816118 D 311402 CDS YP_002547571.1 222106780 7380584 complement(816555..817265) 1 NC_011988.1 glutathione S-transferase 817265 7380584 Avi_5791 Agrobacterium vitis S4 glutathione S-transferase YP_002547571.1 816555 R 311402 CDS YP_002547572.1 222106781 7380585 817432..817878 1 NC_011988.1 hypothetical protein 817878 7380585 Avi_5793 Agrobacterium vitis S4 hypothetical protein YP_002547572.1 817432 D 311402 CDS YP_002547573.1 222106782 7380586 complement(818723..819415) 1 NC_011988.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 819415 hisG 7380586 hisG Agrobacterium vitis S4 ATP phosphoribosyltransferase catalytic subunit YP_002547573.1 818723 R 311402 CDS YP_002547574.1 222106783 7380587 complement(819415..820533) 1 NC_011988.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 820533 hisZ 7380587 hisZ Agrobacterium vitis S4 ATP phosphoribosyltransferase regulatory subunit YP_002547574.1 819415 R 311402 CDS YP_002547575.1 222106784 7380588 complement(820860..821210) 1 NC_011988.1 hypothetical protein 821210 7380588 Avi_5796 Agrobacterium vitis S4 hypothetical protein YP_002547575.1 820860 R 311402 CDS YP_002547576.1 222106785 7380589 complement(821548..821988) 1 NC_011988.1 hypothetical protein 821988 7380589 Avi_5797 Agrobacterium vitis S4 hypothetical protein YP_002547576.1 821548 R 311402 CDS YP_002547577.1 222106786 7380590 823119..823568 1 NC_011988.1 hypothetical protein 823568 7380590 Avi_5800 Agrobacterium vitis S4 hypothetical protein YP_002547577.1 823119 D 311402 CDS YP_002547578.1 222106787 7380591 complement(823968..825620) 1 NC_011988.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 825620 hisS 7380591 hisS Agrobacterium vitis S4 histidyl-tRNA synthetase YP_002547578.1 823968 R 311402 CDS YP_002547579.1 222106788 7380592 825733..826497 1 NC_011988.1 hypothetical protein 826497 7380592 Avi_5802 Agrobacterium vitis S4 hypothetical protein YP_002547579.1 825733 D 311402 CDS YP_002547580.1 222106789 7380593 826535..827644 1 NC_011988.1 hypothetical protein 827644 7380593 Avi_5803 Agrobacterium vitis S4 hypothetical protein YP_002547580.1 826535 D 311402 CDS YP_002547581.1 222106790 7380594 828146..828514 1 NC_011988.1 hypothetical protein 828514 7380594 Avi_5806 Agrobacterium vitis S4 hypothetical protein YP_002547581.1 828146 D 311402 CDS YP_002547582.1 222106791 7380595 828585..829286 1 NC_011988.1 hypothetical protein 829286 7380595 Avi_5807 Agrobacterium vitis S4 hypothetical protein YP_002547582.1 828585 D 311402 CDS YP_002547583.1 222106792 7380596 complement(829275..829922) 1 NC_011988.1 3-methyladenine-DNA glycosylase 829922 tag 7380596 tag Agrobacterium vitis S4 3-methyladenine-DNA glycosylase YP_002547583.1 829275 R 311402 CDS YP_002547584.1 222106793 7380597 830117..830917 1 NC_011988.1 hypothetical protein 830917 7380597 Avi_5810 Agrobacterium vitis S4 hypothetical protein YP_002547584.1 830117 D 311402 CDS YP_002547585.1 222106794 7380598 831072..831743 1 NC_011988.1 hypothetical protein 831743 7380598 Avi_5811 Agrobacterium vitis S4 hypothetical protein YP_002547585.1 831072 D 311402 CDS YP_002547586.1 222106795 7380599 complement(831960..834644) 1 NC_011988.1 transcriptional regulator LuxR family 834644 7380599 Avi_5812 Agrobacterium vitis S4 transcriptional regulator LuxR family YP_002547586.1 831960 R 311402 CDS YP_002547587.1 222106796 7380600 complement(834786..835520) 1 NC_011988.1 phosphopantetheinyl transferase 835520 7380600 Avi_5813 Agrobacterium vitis S4 phosphopantetheinyl transferase YP_002547587.1 834786 R 311402 CDS YP_002547588.1 222106797 7380601 complement(835584..836141) 1 NC_011988.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 836141 recX 7380601 recX Agrobacterium vitis S4 recombination regulator RecX YP_002547588.1 835584 R 311402 CDS YP_002547589.1 222106798 7380602 836406..837431 1 NC_011988.1 quinone oxidoreductase 837431 7380602 Avi_5815 Agrobacterium vitis S4 quinone oxidoreductase YP_002547589.1 836406 D 311402 CDS YP_002547590.1 222106799 7380603 complement(837444..837926) 1 NC_011988.1 acetyltransferase 837926 7380603 Avi_5816 Agrobacterium vitis S4 acetyltransferase YP_002547590.1 837444 R 311402 CDS YP_002547591.1 222106800 7380604 complement(838010..838588) 1 NC_011988.1 hypothetical protein 838588 7380604 Avi_5817 Agrobacterium vitis S4 hypothetical protein YP_002547591.1 838010 R 311402 CDS YP_002547592.1 222106801 7380605 complement(838925..841888) 1 NC_011988.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 841888 ileS 7380605 ileS Agrobacterium vitis S4 isoleucyl-tRNA synthetase YP_002547592.1 838925 R 311402 CDS YP_002547593.1 222106802 7380606 complement(842373..843848) 1 NC_011988.1 monocarboxylic acid permease 843848 7380606 Avi_5820 Agrobacterium vitis S4 monocarboxylic acid permease YP_002547593.1 842373 R 311402 CDS YP_002547594.1 222106803 7380607 complement(843838..844035) 1 NC_011988.1 hypothetical protein 844035 7380607 Avi_5821 Agrobacterium vitis S4 hypothetical protein YP_002547594.1 843838 R 311402 CDS YP_002547595.1 222106804 7380608 complement(844168..844437) 1 NC_011988.1 hypothetical protein 844437 7380608 Avi_5822 Agrobacterium vitis S4 hypothetical protein YP_002547595.1 844168 R 311402 CDS YP_002547596.1 222106805 7380609 complement(844581..845492) 1 NC_011988.1 dihydrodipicolinate synthase 845492 dapA 7380609 dapA Agrobacterium vitis S4 dihydrodipicolinate synthase YP_002547596.1 844581 R 311402 CDS YP_002547597.1 222106806 7380610 complement(845515..845925) 1 NC_011988.1 hypothetical protein 845925 7380610 Avi_5824 Agrobacterium vitis S4 hypothetical protein YP_002547597.1 845515 R 311402 CDS YP_002547598.1 222106807 7380611 complement(846286..847266) 1 NC_011988.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 847266 ribF 7380611 ribF Agrobacterium vitis S4 bifunctional riboflavin kinase/FMN adenylyltransferase YP_002547598.1 846286 R 311402 CDS YP_002547599.1 222106808 7380612 complement(847279..848130) 1 NC_011988.1 hypothetical protein 848130 7380612 Avi_5827 Agrobacterium vitis S4 hypothetical protein YP_002547599.1 847279 R 311402 CDS YP_002547600.1 222106809 7380613 complement(848237..849628) 1 NC_011988.1 chromate transport protein chrA 849628 7380613 Avi_5828 Agrobacterium vitis S4 chromate transport protein chrA YP_002547600.1 848237 R 311402 CDS YP_002547601.1 222106810 7380614 849752..850048 1 NC_011988.1 10 KD chaperonin (protein CPN10) 850048 groES 7380614 groES Agrobacterium vitis S4 10 KD chaperonin (protein CPN10) YP_002547601.1 849752 D 311402 CDS YP_002547602.1 222106811 7380615 850116..851759 1 NC_011988.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 851759 groEL 7380615 groEL Agrobacterium vitis S4 chaperonin GroEL YP_002547602.1 850116 D 311402 CDS YP_002547603.1 222106812 7380616 852346..852762 1 NC_011988.1 hypothetical protein 852762 7380616 Avi_5832 Agrobacterium vitis S4 hypothetical protein YP_002547603.1 852346 D 311402 CDS YP_002547604.1 222106813 7380617 853063..854754 1 NC_011988.1 hydantoin utilization protein 854754 hyuB 7380617 hyuB Agrobacterium vitis S4 hydantoin utilization protein YP_002547604.1 853063 D 311402 CDS YP_002547605.1 222106814 7380618 854751..856814 1 NC_011988.1 hydantoin utilization protein 856814 hyuA 7380618 hyuA Agrobacterium vitis S4 hydantoin utilization protein YP_002547605.1 854751 D 311402 CDS YP_002547606.1 222106815 7380619 856816..857910 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (putrescine) 857910 potG 7380619 potG Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (putrescine) YP_002547606.1 856816 D 311402 CDS YP_002547607.1 222106816 7380620 857977..859155 1 NC_011988.1 ABC transporter substrate binding protein (spermidine/putrescine) 859155 7380620 Avi_5836 Agrobacterium vitis S4 ABC transporter substrate binding protein (spermidine/putrescine) YP_002547607.1 857977 D 311402 CDS YP_002547608.1 222106817 7380621 859454..860320 1 NC_011988.1 spermidine/putrescine ABC transporter permease 860320 7380621 Avi_5839 Agrobacterium vitis S4 spermidine/putrescine ABC transporter permease YP_002547608.1 859454 D 311402 CDS YP_002547609.1 222106818 7380622 860317..861114 1 NC_011988.1 putrescine ABC transporter permease 861114 potI 7380622 potI Agrobacterium vitis S4 putrescine ABC transporter permease YP_002547609.1 860317 D 311402 CDS YP_002547610.1 222106819 7380623 complement(861121..862011) 1 NC_011988.1 methylenetetrahydrofolate reductase 862011 metF 7380623 metF Agrobacterium vitis S4 methylenetetrahydrofolate reductase YP_002547610.1 861121 R 311402 CDS YP_002547611.1 222106820 7380624 862274..863371 1 NC_011988.1 carboxynorspermidine decarboxylase 863371 nspC 7380624 nspC Agrobacterium vitis S4 carboxynorspermidine decarboxylase YP_002547611.1 862274 D 311402 CDS YP_002547612.1 222106821 7380625 863410..864651 1 NC_011988.1 hypothetical protein 864651 7380625 Avi_5844 Agrobacterium vitis S4 hypothetical protein YP_002547612.1 863410 D 311402 CDS YP_002547613.1 222106822 7380626 complement(864720..866456) 1 NC_011988.1 biotin carboxylase 866456 7380626 Avi_5845 Agrobacterium vitis S4 biotin carboxylase YP_002547613.1 864720 R 311402 CDS YP_002547614.1 222106823 7380627 complement(866477..868102) 1 NC_011988.1 hypothetical protein 868102 7380627 Avi_5847 Agrobacterium vitis S4 hypothetical protein YP_002547614.1 866477 R 311402 CDS YP_002547615.1 222106824 7380628 complement(868110..868916) 1 NC_011988.1 hypothetical protein 868916 7380628 Avi_5849 Agrobacterium vitis S4 hypothetical protein YP_002547615.1 868110 R 311402 CDS YP_002547616.1 222106825 7380629 complement(869031..869795) 1 NC_011988.1 LamB/YcsF family protein 869795 7380629 Avi_5851 Agrobacterium vitis S4 LamB/YcsF family protein YP_002547616.1 869031 R 311402 CDS YP_002547617.1 222106826 7380630 complement(869830..871107) 1 NC_011988.1 hypothetical protein 871107 7380630 Avi_5852 Agrobacterium vitis S4 hypothetical protein YP_002547617.1 869830 R 311402 CDS YP_002547618.1 222106827 7380631 871393..872058 1 NC_011988.1 GntR family transcriptional regulator 872058 7380631 Avi_5853 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547618.1 871393 D 311402 CDS YP_002547619.1 222106828 7380632 complement(872059..872523) 1 NC_011988.1 transcriptional regulator AsnC family 872523 putR 7380632 putR Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002547619.1 872059 R 311402 CDS YP_002547620.1 222106829 7380633 872686..873699 1 NC_011988.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 873699 7380633 Avi_5856 Agrobacterium vitis S4 1-aminocyclopropane-1-carboxylate deaminase YP_002547620.1 872686 D 311402 CDS YP_002547621.1 222106830 7380634 complement(873748..874230) 1 NC_011988.1 hypothetical protein 874230 7380634 Avi_5857 Agrobacterium vitis S4 hypothetical protein YP_002547621.1 873748 R 311402 CDS YP_002547622.1 222106831 7380635 complement(874503..875441) 1 NC_011988.1 acetyltransferase 875441 7380635 Avi_5858 Agrobacterium vitis S4 acetyltransferase YP_002547622.1 874503 R 311402 CDS YP_002547623.1 222106832 7380636 875679..876602 1 NC_011988.1 2-hydroxyacid dehydrogenase 876602 7380636 Avi_5861 Agrobacterium vitis S4 2-hydroxyacid dehydrogenase YP_002547623.1 875679 D 311402 CDS YP_002547624.1 222106833 7380637 876697..878154 1 NC_011988.1 succinate semialdehyde dehydrogenase 878154 attK2 7380637 attK2 Agrobacterium vitis S4 succinate semialdehyde dehydrogenase YP_002547624.1 876697 D 311402 CDS YP_002547625.1 222106834 7380638 complement(878185..879084) 1 NC_011988.1 Transcriptional regulator 879084 7380638 Avi_5863 Agrobacterium vitis S4 Transcriptional regulator YP_002547625.1 878185 R 311402 CDS YP_002547626.1 222106835 7380639 879364..880140 1 NC_011988.1 hypothetical protein 880140 7380639 Avi_5865 Agrobacterium vitis S4 hypothetical protein YP_002547626.1 879364 D 311402 CDS YP_002547627.1 222106836 7380640 880153..880395 1 NC_011988.1 hypothetical protein 880395 7380640 Avi_5866 Agrobacterium vitis S4 hypothetical protein YP_002547627.1 880153 D 311402 CDS YP_002547628.1 222106837 7380641 880392..881780 1 NC_011988.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 881780 accC 7380641 accC Agrobacterium vitis S4 acetyl-CoA carboxylase biotin carboxylase subunit YP_002547628.1 880392 D 311402 CDS YP_002547629.1 222106838 7380642 881780..882655 1 NC_011988.1 Allophanate hydrolase subunit 1 882655 7380642 Avi_5869 Agrobacterium vitis S4 Allophanate hydrolase subunit 1 YP_002547629.1 881780 D 311402 CDS YP_002547630.1 222106839 7380643 882645..883622 1 NC_011988.1 hypothetical protein 883622 7380643 Avi_5870 Agrobacterium vitis S4 hypothetical protein YP_002547630.1 882645 D 311402 CDS YP_002547631.1 222106840 7380644 complement(883655..884653) 1 NC_011988.1 GntR family transcriptional regulator 884653 7380644 Avi_5871 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547631.1 883655 R 311402 CDS YP_002547632.1 222106841 7380645 885184..886257 1 NC_011988.1 ABC transporter ATPase 886257 7380645 Avi_5873 Agrobacterium vitis S4 ABC transporter ATPase YP_002547632.1 885184 D 311402 CDS YP_002547633.1 222106842 7380646 886250..887149 1 NC_011988.1 spermidine/putrescine ABC transporter permease 887149 7380646 Avi_5874 Agrobacterium vitis S4 spermidine/putrescine ABC transporter permease YP_002547633.1 886250 D 311402 CDS YP_002547634.1 222106843 7380647 887151..887996 1 NC_011988.1 spermidine/putrescine ABC transporter permease 887996 7380647 Avi_5876 Agrobacterium vitis S4 spermidine/putrescine ABC transporter permease YP_002547634.1 887151 D 311402 CDS YP_002547635.1 222106844 7380648 887993..888742 1 NC_011988.1 short chain fatty acid oxidoreductase 888742 7380648 Avi_5877 Agrobacterium vitis S4 short chain fatty acid oxidoreductase YP_002547635.1 887993 D 311402 CDS YP_002547636.1 222106845 7380649 888762..889529 1 NC_011988.1 dehydrogenase 889529 7380649 Avi_5878 Agrobacterium vitis S4 dehydrogenase YP_002547636.1 888762 D 311402 CDS YP_002547637.1 222106846 7380650 889516..890829 1 NC_011988.1 ABC transporter substrate binding protein (spermidine/putrescine) 890829 7380650 Avi_5880 Agrobacterium vitis S4 ABC transporter substrate binding protein (spermidine/putrescine) YP_002547637.1 889516 D 311402 CDS YP_002547638.1 222106847 7380651 891039..892148 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (spermidine/putrescine) 892148 7380651 Avi_5881 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (spermidine/putrescine) YP_002547638.1 891039 D 311402 CDS YP_002547639.1 222106848 7380652 892196..893077 1 NC_011988.1 polysaccharide deacetylase family protein 893077 7380652 Avi_5882 Agrobacterium vitis S4 polysaccharide deacetylase family protein YP_002547639.1 892196 D 311402 CDS YP_002547640.1 222106849 7380981 893132..893464 1 NC_011988.1 hypothetical protein 893464 7380981 Avi_5883 Agrobacterium vitis S4 hypothetical protein YP_002547640.1 893132 D 311402 CDS YP_002547641.1 222106850 7380982 893457..894473 1 NC_011988.1 hypothetical protein 894473 7380982 Avi_5884 Agrobacterium vitis S4 hypothetical protein YP_002547641.1 893457 D 311402 CDS YP_002547642.1 222106851 7380983 894547..895764 1 NC_011988.1 ABC transporter substrate binding protein (spermidine/putrescine) 895764 7380983 Avi_5885 Agrobacterium vitis S4 ABC transporter substrate binding protein (spermidine/putrescine) YP_002547642.1 894547 D 311402 CDS YP_002547643.1 222106852 7380984 895787..897166 1 NC_011988.1 hypothetical protein 897166 gatA 7380984 gatA Agrobacterium vitis S4 hypothetical protein YP_002547643.1 895787 D 311402 CDS YP_002547644.1 222106853 7380985 complement(897173..897649) 1 NC_011988.1 transcriptional regulator AsnC family 897649 lrp 7380985 lrp Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002547644.1 897173 R 311402 CDS YP_002547645.1 222106854 7380986 897873..899210 1 NC_011988.1 oxidoreductase 899210 7380986 Avi_5888 Agrobacterium vitis S4 oxidoreductase YP_002547645.1 897873 D 311402 CDS YP_002547646.1 222106855 7380987 899428..900909 1 NC_011988.1 sulfate permease 900909 7380987 Avi_5890 Agrobacterium vitis S4 sulfate permease YP_002547646.1 899428 D 311402 CDS YP_002547647.1 222106856 7380988 complement(901178..902659) 1 NC_011988.1 siroheme synthase 902659 cysG 7380988 cysG Agrobacterium vitis S4 siroheme synthase YP_002547647.1 901178 R 311402 CDS YP_002547648.1 222106857 7380989 complement(902631..905288) 1 NC_011988.1 nitrate reductase large subunit 905288 nasA 7380989 nasA Agrobacterium vitis S4 nitrate reductase large subunit YP_002547648.1 902631 R 311402 CDS YP_002547649.1 222106858 7380990 complement(905294..905629) 1 NC_011988.1 nitrite reductase small subunit 905629 nirD 7380990 nirD Agrobacterium vitis S4 nitrite reductase small subunit YP_002547649.1 905294 R 311402 CDS YP_002547650.1 222106859 7380991 complement(905634..908081) 1 NC_011988.1 nitrite reductase large subunit 908081 nirB 7380991 nirB Agrobacterium vitis S4 nitrite reductase large subunit YP_002547650.1 905634 R 311402 CDS YP_002547651.1 222106860 7380992 complement(908087..908890) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (nitrate) 908890 nrtC 7380992 nrtC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (nitrate) YP_002547651.1 908087 R 311402 CDS YP_002547652.1 222106861 7380993 complement(908899..909792) 1 NC_011988.1 nitrate ABC transporter permease 909792 nrtB 7380993 nrtB Agrobacterium vitis S4 nitrate ABC transporter permease YP_002547652.1 908899 R 311402 CDS YP_002547653.1 222106862 7380994 complement(909816..911114) 1 NC_011988.1 ABC transporter substrate binding protein (nitrate) 911114 nrtA 7380994 nrtA Agrobacterium vitis S4 ABC transporter substrate binding protein (nitrate) YP_002547653.1 909816 R 311402 CDS YP_002547654.1 222106863 7380995 complement(911524..912795) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (nitrate) 912795 nrtC 7380995 nrtC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (nitrate) YP_002547654.1 911524 R 311402 CDS YP_002547655.1 222106864 7380996 complement(912808..913395) 1 NC_011988.1 two component response regulator 913395 nasT 7380996 nasT Agrobacterium vitis S4 two component response regulator YP_002547655.1 912808 R 311402 CDS YP_002547656.1 222106865 7380997 913864..914589 1 NC_011988.1 hypothetical protein 914589 7380997 Avi_5902 Agrobacterium vitis S4 hypothetical protein YP_002547656.1 913864 D 311402 CDS YP_002547657.1 222106866 7380998 complement(914636..915595) 1 NC_011988.1 hypothetical protein 915595 7380998 Avi_5904 Agrobacterium vitis S4 hypothetical protein YP_002547657.1 914636 R 311402 CDS YP_002547658.1 222106867 7380999 915835..916485 1 NC_011988.1 hypothetical protein 916485 7380999 Avi_5905 Agrobacterium vitis S4 hypothetical protein YP_002547658.1 915835 D 311402 CDS YP_002547659.1 222106868 7381000 complement(916493..917410) 1 NC_011988.1 LysR family transcriptional regulator 917410 7381000 Avi_5907 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547659.1 916493 R 311402 CDS YP_002547660.1 222106869 7381001 917559..918734 1 NC_011988.1 glutaryl-CoA dehydrogenase 918734 gcdH 7381001 gcdH Agrobacterium vitis S4 glutaryl-CoA dehydrogenase YP_002547660.1 917559 D 311402 CDS YP_002547661.1 222106870 7381002 918745..919896 1 NC_011988.1 L-carnitine dehydratase 919896 caiB 7381002 caiB Agrobacterium vitis S4 L-carnitine dehydratase YP_002547661.1 918745 D 311402 CDS YP_002547662.1 222106871 7381003 920003..920491 1 NC_011988.1 hypothetical protein 920491 7381003 Avi_5910 Agrobacterium vitis S4 hypothetical protein YP_002547662.1 920003 D 311402 CDS YP_002547663.1 222106872 7381004 920703..921752 1 NC_011988.1 aminopeptidase 921752 7381004 Avi_5913 Agrobacterium vitis S4 aminopeptidase YP_002547663.1 920703 D 311402 CDS YP_002547664.1 222106873 7381005 921780..922646 1 NC_011988.1 catalyzes the transamination of D-amino acids and their alpha-keto acids; D-amino acid aminotransferase 922646 dat 7381005 dat Agrobacterium vitis S4 D-amino acid aminotransferase YP_002547664.1 921780 D 311402 CDS YP_002547665.1 222106874 7381006 complement(922965..924473) 1 NC_011988.1 penicillin binding protein 924473 7381006 Avi_5915 Agrobacterium vitis S4 penicillin binding protein YP_002547665.1 922965 R 311402 CDS YP_002547666.1 222106875 7381007 924721..925755 1 NC_011988.1 dipeptidase 925755 7381007 Avi_5916 Agrobacterium vitis S4 dipeptidase YP_002547666.1 924721 D 311402 CDS YP_002547667.1 222106876 7381008 926047..927879 1 NC_011988.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 927879 thiC 7381008 thiC Agrobacterium vitis S4 thiamine biosynthesis protein ThiC YP_002547667.1 926047 D 311402 CDS YP_002547668.1 222106877 7381009 927881..928873 1 NC_011988.1 glycine oxidase ThiO 928873 thiO 7381009 thiO Agrobacterium vitis S4 glycine oxidase ThiO YP_002547668.1 927881 D 311402 CDS YP_002547669.1 222106878 7381010 928870..929067 1 NC_011988.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 929067 thiS 7381010 thiS Agrobacterium vitis S4 sulfur carrier protein ThiS YP_002547669.1 928870 D 311402 CDS YP_002547670.1 222106879 7381011 929069..929842 1 NC_011988.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 929842 thiG 7381011 thiG Agrobacterium vitis S4 thiazole synthase YP_002547670.1 929069 D 311402 CDS YP_002547671.1 222106880 7381012 929839..930450 1 NC_011988.1 thiamine-phosphate pyrophosphorylase 930450 7381012 Avi_5922 Agrobacterium vitis S4 thiamine-phosphate pyrophosphorylase YP_002547671.1 929839 D 311402 CDS YP_002547672.1 222106881 7381160 937523..939031 1 NC_011988.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 939031 7381160 Avi_5923 Agrobacterium vitis S4 pyruvate kinase YP_002547672.1 937523 D 311402 CDS YP_002547673.1 222106882 7381014 complement(939138..941474) 1 NC_011988.1 exopolysaccharide polymerization/transport protein 941474 exoP 7381014 exoP Agrobacterium vitis S4 exopolysaccharide polymerization/transport protein YP_002547673.1 939138 R 311402 CDS YP_002547674.1 222106883 7381015 complement(942115..943110) 1 NC_011988.1 succinoglycan biosynthesis glycosyltransferase 943110 exoO 7381015 exoO Agrobacterium vitis S4 succinoglycan biosynthesis glycosyltransferase YP_002547674.1 942115 R 311402 CDS YP_002547675.1 222106884 7381016 complement(943107..944039) 1 NC_011988.1 succinoglycan biosynthesis protein 944039 exoM 7381016 exoM Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002547675.1 943107 R 311402 CDS YP_002547676.1 222106885 7381017 complement(944036..945061) 1 NC_011988.1 succinoglycan biosynthesis protein 945061 exoA 7381017 exoA Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002547676.1 944036 R 311402 CDS YP_002547677.1 222106886 7381018 complement(945051..946295) 1 NC_011988.1 succinoglycan biosynthesis protein 946295 exoL 7381018 exoL Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002547677.1 945051 R 311402 CDS YP_002547678.1 222106887 7381019 complement(946525..947331) 1 NC_011988.1 endo-1,3-1,4-beta-glycanase 947331 exoK 7381019 exoK Agrobacterium vitis S4 endo-1,3-1,4-beta-glycanase YP_002547678.1 946525 R 311402 CDS YP_002547679.1 222106888 7381020 complement(947333..948409) 1 NC_011988.1 succinoglycan biosynthesis protein 948409 exoH 7381020 exoH Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002547679.1 947333 R 311402 CDS YP_002547680.1 222106889 7381021 complement(948856..950334) 1 NC_011988.1 succinoglycan biosynthesis transport protein 950334 exoT 7381021 exoT Agrobacterium vitis S4 succinoglycan biosynthesis transport protein YP_002547680.1 948856 R 311402 CDS YP_002547681.1 222106890 7381022 950571..951530 1 NC_011988.1 succinoglycan biosynthesis protein 951530 exoW 7381022 exoW Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002547681.1 950571 D 311402 CDS YP_002547682.1 222106891 7381023 951604..952569 1 NC_011988.1 succinoglycan biosynthesis protein 952569 exoV 7381023 exoV Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002547682.1 951604 D 311402 CDS YP_002547683.1 222106892 7381024 complement(952697..953713) 1 NC_011988.1 succinoglycan biosynthesis glycosyltransferase 953713 exoU 7381024 exoU Agrobacterium vitis S4 succinoglycan biosynthesis glycosyltransferase YP_002547683.1 952697 R 311402 CDS YP_002547684.1 222106893 7381025 complement(953986..954261) 1 NC_011988.1 exopolysaccharide production repressor protein 954261 exoX 7381025 exoX Agrobacterium vitis S4 exopolysaccharide production repressor protein YP_002547684.1 953986 R 311402 CDS YP_002547685.1 222106894 7381026 955048..955725 1 NC_011988.1 structural protein 955725 exoY 7381026 exoY Agrobacterium vitis S4 structural protein YP_002547685.1 955048 D 311402 CDS YP_002547686.1 222106895 7381027 955822..957102 1 NC_011988.1 exopolysaccharide production protein 957102 exoF 7381027 exoF Agrobacterium vitis S4 exopolysaccharide production protein YP_002547686.1 955822 D 311402 CDS YP_002547687.1 222106896 7381028 957109..958386 1 NC_011988.1 exopolysaccharide production protein 958386 exoQ 7381028 exoQ Agrobacterium vitis S4 exopolysaccharide production protein YP_002547687.1 957109 D 311402 CDS YP_002547688.1 222106897 7381029 958911..959270 1 NC_011988.1 hypothetical protein 959270 7381029 Avi_5941 Agrobacterium vitis S4 hypothetical protein YP_002547688.1 958911 D 311402 CDS YP_002547689.1 222106898 7381030 959302..959598 1 NC_011988.1 hypothetical protein 959598 7381030 Avi_5942 Agrobacterium vitis S4 hypothetical protein YP_002547689.1 959302 D 311402 CDS YP_002547690.1 222106899 7381031 complement(959653..960300) 1 NC_011988.1 hypothetical protein 960300 7381031 Avi_5943 Agrobacterium vitis S4 hypothetical protein YP_002547690.1 959653 R 311402 CDS YP_002547691.1 222106900 7381032 complement(960435..961388) 1 NC_011988.1 dioxygenase 961388 7381032 Avi_5945 Agrobacterium vitis S4 dioxygenase YP_002547691.1 960435 R 311402 CDS YP_002547692.1 222106901 7381033 961645..962583 1 NC_011988.1 LysR family transcriptional regulator 962583 7381033 Avi_5946 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002547692.1 961645 D 311402 CDS YP_002547693.1 222106902 7381034 962799..964019 1 NC_011988.1 exopolysaccharide export protein 964019 pssN 7381034 pssN Agrobacterium vitis S4 exopolysaccharide export protein YP_002547693.1 962799 D 311402 CDS YP_002547694.1 222106903 7381035 complement(964089..964841) 1 NC_011988.1 TetR family transcriptional regulator 964841 7381035 Avi_5949 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002547694.1 964089 R 311402 CDS YP_002547695.1 222106904 7381036 964941..966407 1 NC_011988.1 crocetin dialdehyde 966407 7381036 Avi_5950 Agrobacterium vitis S4 crocetin dialdehyde YP_002547695.1 964941 D 311402 CDS YP_002547696.1 222106905 7381037 966710..968581 1 NC_011988.1 membrane protein 968581 7381037 Avi_5952 Agrobacterium vitis S4 membrane protein YP_002547696.1 966710 D 311402 CDS YP_002547697.1 222106906 7381038 968604..970085 1 NC_011988.1 vanillin: NAD oxidoreductase 970085 vdh 7381038 vdh Agrobacterium vitis S4 vanillin: NAD oxidoreductase YP_002547697.1 968604 D 311402 CDS YP_002547698.1 222106907 7381039 complement(970177..970836) 1 NC_011988.1 TetR family transcriptional regulator 970836 7381039 Avi_5954 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002547698.1 970177 R 311402 CDS YP_002547699.1 222106908 7381040 complement(970941..971513) 1 NC_011988.1 hypothetical protein 971513 7381040 Avi_5955 Agrobacterium vitis S4 hypothetical protein YP_002547699.1 970941 R 311402 CDS YP_002547700.1 222106909 7381041 complement(971515..973188) 1 NC_011988.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 973188 hutU 7381041 hutU Agrobacterium vitis S4 urocanate hydratase YP_002547700.1 971515 R 311402 CDS YP_002547701.1 222106910 7381042 complement(973191..973997) 1 NC_011988.1 N-formylglutamate amidohydrolase 973997 hutG 7381042 hutG Agrobacterium vitis S4 N-formylglutamate amidohydrolase YP_002547701.1 973191 R 311402 CDS YP_002547702.1 222106911 7381043 complement(973998..975536) 1 NC_011988.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 975536 hutH 7381043 hutH Agrobacterium vitis S4 histidine ammonia-lyase YP_002547702.1 973998 R 311402 CDS YP_002547703.1 222106912 7381044 complement(975552..976772) 1 NC_011988.1 imidazolonepropionase 976772 hutI 7381044 hutI Agrobacterium vitis S4 imidazolonepropionase YP_002547703.1 975552 R 311402 CDS YP_002547704.1 222106913 7381045 976882..978231 1 NC_011988.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 978231 7381045 Avi_5960 Agrobacterium vitis S4 N-formimino-L-glutamate deiminase YP_002547704.1 976882 D 311402 CDS YP_002547705.1 222106914 7381046 complement(978458..979819) 1 NC_011988.1 nitrilotriacetate monooxygenase 979819 7381046 Avi_5962 Agrobacterium vitis S4 nitrilotriacetate monooxygenase YP_002547705.1 978458 R 311402 CDS YP_002547706.1 222106915 7381047 complement(979840..980589) 1 NC_011988.1 GntR family transcriptional regulator 980589 7381047 Avi_5963 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547706.1 979840 R 311402 CDS YP_002547707.1 222106916 7381048 complement(980586..981377) 1 NC_011988.1 ABC transporter ATPase 981377 7381048 Avi_5964 Agrobacterium vitis S4 ABC transporter ATPase YP_002547707.1 980586 R 311402 CDS YP_002547708.1 222106917 7381049 complement(981374..982042) 1 NC_011988.1 amino acid ABC transporter permease 982042 7381049 Avi_5965 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002547708.1 981374 R 311402 CDS YP_002547709.1 222106918 7381050 complement(982039..982680) 1 NC_011988.1 amino acid ABC transporter permease 982680 7381050 Avi_5966 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002547709.1 982039 R 311402 CDS YP_002547710.1 222106919 7381051 complement(982967..983794) 1 NC_011988.1 ABC-type amino acid transport/signal transduction periplasmic protein 983794 7381051 Avi_5967 Agrobacterium vitis S4 ABC-type amino acid transport/signal transduction periplasmic protein YP_002547710.1 982967 R 311402 CDS YP_002547711.1 222106920 7381052 complement(984004..984639) 1 NC_011988.1 putative fructose transport system kinase 984639 frcK 7381052 frcK Agrobacterium vitis S4 putative fructose transport system kinase YP_002547711.1 984004 R 311402 CDS YP_002547712.1 222106921 7381053 complement(984636..985442) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (sugar) 985442 frcA 7381053 frcA Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002547712.1 984636 R 311402 CDS YP_002547713.1 222106922 7381054 complement(985418..986500) 1 NC_011988.1 sugar ABC transporter permease 986500 frcC 7381054 frcC Agrobacterium vitis S4 sugar ABC transporter permease YP_002547713.1 985418 R 311402 CDS YP_002547714.1 222106923 7381055 complement(986696..987721) 1 NC_011988.1 ABC transporter substrate binding protein (sugar) 987721 frcB 7381055 frcB Agrobacterium vitis S4 ABC transporter substrate binding protein (sugar) YP_002547714.1 986696 R 311402 CDS YP_002547715.1 222106924 7381056 988071..989300 1 NC_011988.1 transcriptional regulator ROK family 989300 frcR 7381056 frcR Agrobacterium vitis S4 transcriptional regulator ROK family YP_002547715.1 988071 D 311402 CDS YP_002547716.1 222106925 7381057 989301..989732 1 NC_011988.1 hypothetical protein 989732 7381057 Avi_5973 Agrobacterium vitis S4 hypothetical protein YP_002547716.1 989301 D 311402 CDS YP_002547717.1 222106926 7381058 complement(989849..990616) 1 NC_011988.1 NAD/NADP dependent oxidoreductase 990616 7381058 Avi_5975 Agrobacterium vitis S4 NAD/NADP dependent oxidoreductase YP_002547717.1 989849 R 311402 CDS YP_002547718.1 222106927 7381059 complement(990658..991104) 1 NC_011988.1 transcriptional regulator AsnC family 991104 7381059 Avi_5976 Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002547718.1 990658 R 311402 CDS YP_002547719.1 222106928 7381060 991228..992160 1 NC_011988.1 arginase 992160 rocF 7381060 rocF Agrobacterium vitis S4 arginase YP_002547719.1 991228 D 311402 CDS YP_002547720.1 222106929 7381061 992160..993215 1 NC_011988.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 993215 ocd 7381061 ocd Agrobacterium vitis S4 ornithine cyclodeaminase YP_002547720.1 992160 D 311402 CDS YP_002547721.1 222106930 7381062 993302..993460 1 NC_011988.1 stress induced protein 993460 7381062 Avi_5980 Agrobacterium vitis S4 stress induced protein YP_002547721.1 993302 D 311402 CDS YP_002547722.1 222106931 7380816 993593..994708 1 NC_011988.1 di-transpoly-cis-decaprenylcistransferase 994708 yteR 7380816 yteR Agrobacterium vitis S4 di-transpoly-cis-decaprenylcistransferase YP_002547722.1 993593 D 311402 CDS YP_002547723.1 222106932 7380817 complement(994731..995684) 1 NC_011988.1 tonB protein 995684 tonB 7380817 tonB Agrobacterium vitis S4 tonB protein YP_002547723.1 994731 R 311402 CDS YP_002547724.1 222106933 7380818 complement(995681..996148) 1 NC_011988.1 TonB system transport protein ExbD 996148 exbD 7380818 exbD Agrobacterium vitis S4 TonB system transport protein ExbD YP_002547724.1 995681 R 311402 CDS YP_002547725.1 222106934 7380819 complement(996153..997178) 1 NC_011988.1 tonB-system energizer ExbB 997178 exbB 7380819 exbB Agrobacterium vitis S4 tonB-system energizer ExbB YP_002547725.1 996153 R 311402 CDS YP_002547726.1 222106935 7380820 997212..997766 1 NC_011988.1 hypothetical protein 997766 7380820 Avi_5986 Agrobacterium vitis S4 hypothetical protein YP_002547726.1 997212 D 311402 CDS YP_002547727.1 222106936 7380821 complement(997946..998719) 1 NC_011988.1 transcriptional regulator CRP family 998719 7380821 Avi_5989 Agrobacterium vitis S4 transcriptional regulator CRP family YP_002547727.1 997946 R 311402 CDS YP_002547728.1 222106937 7380822 998861..999289 1 NC_011988.1 hypothetical protein 999289 7380822 Avi_5991 Agrobacterium vitis S4 hypothetical protein YP_002547728.1 998861 D 311402 CDS YP_002547729.1 222106938 7380823 complement(999342..999908) 1 NC_011988.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 999908 7380823 Avi_5992 Agrobacterium vitis S4 RNA polymerase sigma factor YP_002547729.1 999342 R 311402 CDS YP_002547730.1 222106939 7380824 1000540..1000704 1 NC_011988.1 hypothetical protein 1000704 7380824 Avi_5993 Agrobacterium vitis S4 hypothetical protein YP_002547730.1 1000540 D 311402 CDS YP_002547731.1 222106940 7380825 1000715..1001182 1 NC_011988.1 hypothetical protein 1001182 7380825 Avi_5995 Agrobacterium vitis S4 hypothetical protein YP_002547731.1 1000715 D 311402 CDS YP_002547732.1 222106941 7380826 complement(1001324..1002391) 1 NC_011988.1 hypothetical protein 1002391 7380826 Avi_5998 Agrobacterium vitis S4 hypothetical protein YP_002547732.1 1001324 R 311402 CDS YP_002547733.1 222106942 7380827 complement(1002646..1003641) 1 NC_011988.1 two component sensor kinase 1003641 7380827 Avi_5999 Agrobacterium vitis S4 two component sensor kinase YP_002547733.1 1002646 R 311402 CDS YP_002547734.1 222106943 7380828 complement(1003819..1004613) 1 NC_011988.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 1004613 7380828 Avi_6000 Agrobacterium vitis S4 two-component response regulator YP_002547734.1 1003819 R 311402 CDS YP_002547735.1 222106944 7380829 1005428..1005559 1 NC_011988.1 hypothetical protein 1005559 7380829 Avi_6001 Agrobacterium vitis S4 hypothetical protein YP_002547735.1 1005428 D 311402 CDS YP_002547736.1 222106945 7380830 complement(1005695..1006207) 1 NC_011988.1 DNA-binding ferritin-like protein (oxidative damage protectant) 1006207 7380830 Avi_6002 Agrobacterium vitis S4 DNA-binding ferritin-like protein (oxidative damage protectant) YP_002547736.1 1005695 R 311402 CDS YP_002547737.1 222106946 7380831 complement(1006318..1006752) 1 NC_011988.1 hypothetical protein 1006752 7380831 Avi_6003 Agrobacterium vitis S4 hypothetical protein YP_002547737.1 1006318 R 311402 CDS YP_002547738.1 222106947 7380832 complement(1006756..1007055) 1 NC_011988.1 hypothetical protein 1007055 7380832 Avi_6004 Agrobacterium vitis S4 hypothetical protein YP_002547738.1 1006756 R 311402 CDS YP_002547739.1 222106948 7380833 1007342..1007539 1 NC_011988.1 hypothetical protein 1007539 7380833 Avi_6005 Agrobacterium vitis S4 hypothetical protein YP_002547739.1 1007342 D 311402 CDS YP_002547740.1 222106949 7380834 complement(1007636..1009255) 1 NC_011988.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 1009255 7380834 Avi_6007 Agrobacterium vitis S4 ATP-dependent DNA ligase YP_002547740.1 1007636 R 311402 CDS YP_002547741.1 222106950 7380835 complement(1009252..1010265) 1 NC_011988.1 hypothetical protein 1010265 7380835 Avi_6008 Agrobacterium vitis S4 hypothetical protein YP_002547741.1 1009252 R 311402 CDS YP_002547742.1 222106951 7380836 1010412..1010648 1 NC_011988.1 transcriptional regulator Lrp family 1010648 7380836 Avi_6009 Agrobacterium vitis S4 transcriptional regulator Lrp family YP_002547742.1 1010412 D 311402 CDS YP_002547743.1 222106952 7380837 complement(1010671..1013595) 1 NC_011988.1 hypothetical protein 1013595 7380837 Avi_6010 Agrobacterium vitis S4 hypothetical protein YP_002547743.1 1010671 R 311402 CDS YP_002547744.1 222106953 7380838 complement(1013874..1014758) 1 NC_011988.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1014758 purU 7380838 purU Agrobacterium vitis S4 formyltetrahydrofolate deformylase YP_002547744.1 1013874 R 311402 CDS YP_002547745.1 222106954 7380839 1015119..1016210 1 NC_011988.1 endoglucanase precursor 1016210 7380839 Avi_6012 Agrobacterium vitis S4 endoglucanase precursor YP_002547745.1 1015119 D 311402 CDS YP_002547746.1 222106955 7380840 complement(1016153..1017370) 1 NC_011988.1 UDP-phosphate alpha N-acetylglucosaminyltransferase 1017370 rfe 7380840 rfe Agrobacterium vitis S4 UDP-phosphate alpha N-acetylglucosaminyltransferase YP_002547746.1 1016153 R 311402 CDS YP_002547747.1 222106956 7380841 complement(1017460..1019673) 1 NC_011988.1 exopolysaccharide polymerization/transport protein 1019673 7380841 Avi_6014 Agrobacterium vitis S4 exopolysaccharide polymerization/transport protein YP_002547747.1 1017460 R 311402 CDS YP_002547748.1 222106957 7380842 1019941..1021134 1 NC_011988.1 GumH protein 1021134 7380842 Avi_6015 Agrobacterium vitis S4 GumH protein YP_002547748.1 1019941 D 311402 CDS YP_002547749.1 222106958 7380843 1021131..1022282 1 NC_011988.1 hypothetical protein 1022282 7380843 Avi_6016 Agrobacterium vitis S4 hypothetical protein YP_002547749.1 1021131 D 311402 CDS YP_002547750.1 222106959 7380844 1022337..1023857 1 NC_011988.1 polysaccharide efflux transporter 1023857 7380844 Avi_6017 Agrobacterium vitis S4 polysaccharide efflux transporter YP_002547750.1 1022337 D 311402 CDS YP_002547751.1 222106960 7380845 1024016..1025926 1 NC_011988.1 hypothetical protein 1025926 7380845 Avi_6018 Agrobacterium vitis S4 hypothetical protein YP_002547751.1 1024016 D 311402 CDS YP_002547752.1 222106961 7380846 complement(1025906..1028368) 1 NC_011988.1 mannosidase 1028368 7380846 Avi_6019 Agrobacterium vitis S4 mannosidase YP_002547752.1 1025906 R 311402 CDS YP_002547753.1 222106962 7380847 complement(1028423..1029385) 1 NC_011988.1 hypothetical protein 1029385 7380847 Avi_6020 Agrobacterium vitis S4 hypothetical protein YP_002547753.1 1028423 R 311402 CDS YP_002547754.1 222106963 7380848 complement(1029388..1030296) 1 NC_011988.1 hypothetical protein 1030296 7380848 Avi_6021 Agrobacterium vitis S4 hypothetical protein YP_002547754.1 1029388 R 311402 CDS YP_002547755.1 222106964 7380849 complement(1030301..1031500) 1 NC_011988.1 acyl-CoA dehydrogenase 1031500 acd 7380849 acd Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002547755.1 1030301 R 311402 CDS YP_002547756.1 222106965 7380850 complement(1031500..1031751) 1 NC_011988.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 1031751 7380850 Avi_6023 Agrobacterium vitis S4 acyl carrier protein YP_002547756.1 1031500 R 311402 CDS YP_002547757.1 222106966 7380851 complement(1031984..1033033) 1 NC_011988.1 L-lysine 2,3-aminomutase 1033033 kamA 7380851 kamA Agrobacterium vitis S4 L-lysine 2,3-aminomutase YP_002547757.1 1031984 R 311402 CDS YP_002547758.1 222106967 7380852 complement(1033030..1034103) 1 NC_011988.1 lysyl-tRNA synthetase 1034103 poxA 7380852 poxA Agrobacterium vitis S4 lysyl-tRNA synthetase YP_002547758.1 1033030 R 311402 CDS YP_002547759.1 222106968 7380853 1034266..1034835 1 NC_011988.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1034835 efp 7380853 efp Agrobacterium vitis S4 elongation factor P YP_002547759.1 1034266 D 311402 CDS YP_002547760.1 222106969 7380854 complement(1035056..1036507) 1 NC_011988.1 nodulation protein T precursor 1036507 nodT 7380854 nodT Agrobacterium vitis S4 nodulation protein T precursor YP_002547760.1 1035056 R 311402 CDS YP_002547761.1 222106970 7380855 complement(1036618..1039752) 1 NC_011988.1 acriflavin resistance protein B 1039752 acrB 7380855 acrB Agrobacterium vitis S4 acriflavin resistance protein B YP_002547761.1 1036618 R 311402 CDS YP_002547762.1 222106971 7380856 complement(1039797..1041032) 1 NC_011988.1 acriflavin resistance protein A 1041032 acrA 7380856 acrA Agrobacterium vitis S4 acriflavin resistance protein A YP_002547762.1 1039797 R 311402 CDS YP_002547763.1 222106972 7380857 complement(1041205..1041873) 1 NC_011988.1 TetR family transcriptional regulator 1041873 ameR 7380857 ameR Agrobacterium vitis S4 TetR family transcriptional regulator YP_002547763.1 1041205 R 311402 CDS YP_002547764.1 222106973 7380858 complement(1041879..1042829) 1 NC_011988.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1042829 purC 7380858 purC Agrobacterium vitis S4 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002547764.1 1041879 R 311402 CDS YP_002547765.1 222106974 7380859 complement(1043045..1043698) 1 NC_011988.1 membrane protein 1043698 7380859 Avi_6032 Agrobacterium vitis S4 membrane protein YP_002547765.1 1043045 R 311402 CDS YP_002547766.1 222106975 7380864 1052613..1053755 1 NC_011988.1 polysaccharide export protein 1053755 bexD 7380864 bexD Agrobacterium vitis S4 polysaccharide export protein YP_002547766.1 1052613 D 311402 CDS YP_002547767.1 222106976 7380865 complement(1053904..1054809) 1 NC_011988.1 serine/threonine protein kinase 1054809 impN 7380865 impN Agrobacterium vitis S4 serine/threonine protein kinase YP_002547767.1 1053904 R 311402 CDS YP_002547768.1 222106977 7380866 complement(1054796..1056247) 1 NC_011988.1 serine/threonine phosphoprotein phosphatase 1056247 impM 7380866 impM Agrobacterium vitis S4 serine/threonine phosphoprotein phosphatase YP_002547768.1 1054796 R 311402 CDS YP_002547769.1 222106978 7380867 complement(1056348..1059842) 1 NC_011988.1 IcmF family protein 1059842 impL 7380867 impL Agrobacterium vitis S4 IcmF family protein YP_002547769.1 1056348 R 311402 CDS YP_002547770.1 222106979 7380868 complement(1059839..1061374) 1 NC_011988.1 OmpA-type porin 1061374 impK 7380868 impK Agrobacterium vitis S4 OmpA-type porin YP_002547770.1 1059839 R 311402 CDS YP_002547771.1 222106980 7380869 complement(1061371..1062711) 1 NC_011988.1 hypothetical protein 1062711 impJ 7380869 impJ Agrobacterium vitis S4 hypothetical protein YP_002547771.1 1061371 R 311402 CDS YP_002547772.1 222106981 7380870 complement(1062701..1063960) 1 NC_011988.1 forkhead-type phosphopeptide-binding protein 1063960 impI 7380870 impI Agrobacterium vitis S4 forkhead-type phosphopeptide-binding protein YP_002547772.1 1062701 R 311402 CDS YP_002547773.1 222106982 7380871 complement(1063957..1064967) 1 NC_011988.1 hypothetical protein 1064967 impH 7380871 impH Agrobacterium vitis S4 hypothetical protein YP_002547773.1 1063957 R 311402 CDS YP_002547774.1 222106983 7380872 complement(1064976..1066757) 1 NC_011988.1 hypothetical protein 1066757 impG 7380872 impG Agrobacterium vitis S4 hypothetical protein YP_002547774.1 1064976 R 311402 CDS YP_002547775.1 222106984 7380873 complement(1066750..1067259) 1 NC_011988.1 hypothetical protein 1067259 impF 7380873 impF Agrobacterium vitis S4 hypothetical protein YP_002547775.1 1066750 R 311402 CDS YP_002547776.1 222106985 7380874 complement(1067252..1068079) 1 NC_011988.1 hypothetical protein 1068079 impE 7380874 impE Agrobacterium vitis S4 hypothetical protein YP_002547776.1 1067252 R 311402 CDS YP_002547777.1 222106986 7380875 complement(1068076..1069443) 1 NC_011988.1 hypothetical protein 1069443 impD 7380875 impD Agrobacterium vitis S4 hypothetical protein YP_002547777.1 1068076 R 311402 CDS YP_002547778.1 222106987 7380876 complement(1069546..1071027) 1 NC_011988.1 hypothetical protein 1071027 impC 7380876 impC Agrobacterium vitis S4 hypothetical protein YP_002547778.1 1069546 R 311402 CDS YP_002547779.1 222106988 7380877 complement(1071100..1071615) 1 NC_011988.1 hypothetical protein 1071615 impB 7380877 impB Agrobacterium vitis S4 hypothetical protein YP_002547779.1 1071100 R 311402 CDS YP_002547780.1 222106989 7380878 complement(1071691..1072767) 1 NC_011988.1 hypothetical protein 1072767 impA 7380878 impA Agrobacterium vitis S4 hypothetical protein YP_002547780.1 1071691 R 311402 CDS YP_002547781.1 222106990 7380879 1072987..1075698 1 NC_011988.1 ATP-dependent Clp protease ATP-binding subunit 1075698 clpB 7380879 clpB Agrobacterium vitis S4 ATP-dependent Clp protease ATP-binding subunit YP_002547781.1 1072987 D 311402 CDS YP_002547782.1 222106991 7380880 1075761..1076237 1 NC_011988.1 hypothetical protein 1076237 7380880 Avi_6054 Agrobacterium vitis S4 hypothetical protein YP_002547782.1 1075761 D 311402 CDS YP_002547783.1 222106992 7380881 1076487..1076921 1 NC_011988.1 hypothetical protein 1076921 7380881 Avi_6056 Agrobacterium vitis S4 hypothetical protein YP_002547783.1 1076487 D 311402 CDS YP_002547784.1 222106993 7380882 1077785..1080304 1 NC_011988.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 1080304 secD 7380882 secD Agrobacterium vitis S4 bifunctional preprotein translocase subunit SecD/SecF YP_002547784.1 1077785 D 311402 CDS YP_002547785.1 222106994 7380883 complement(1080351..1081715) 1 NC_011988.1 hypothetical protein 1081715 7380883 Avi_6060 Agrobacterium vitis S4 hypothetical protein YP_002547785.1 1080351 R 311402 CDS YP_002547786.1 222106995 7380884 complement(1081883..1082863) 1 NC_011988.1 acyl-CoA dehydrogenase 1082863 acd 7380884 acd Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002547786.1 1081883 R 311402 CDS YP_002547787.1 222106996 7380885 complement(1083165..1084274) 1 NC_011988.1 monooxygenase 1084274 7380885 Avi_6062 Agrobacterium vitis S4 monooxygenase YP_002547787.1 1083165 R 311402 CDS YP_002547788.1 222106997 7380886 1084565..1084936 1 NC_011988.1 transcriptional regulator ArsR family 1084936 7380886 Avi_6064 Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002547788.1 1084565 D 311402 CDS YP_002547789.1 222106998 7380887 1084941..1086035 1 NC_011988.1 arsenical pump membrane protein 1086035 arsB 7380887 arsB Agrobacterium vitis S4 arsenical pump membrane protein YP_002547789.1 1084941 D 311402 CDS YP_002547790.1 222106999 7380888 1086032..1086454 1 NC_011988.1 arsenate reductase 1086454 arsC 7380888 arsC Agrobacterium vitis S4 arsenate reductase YP_002547790.1 1086032 D 311402 CDS YP_002547791.1 222107000 7380889 1086456..1087154 1 NC_011988.1 arsenical resistance protein ArsH 1087154 arsH 7380889 arsH Agrobacterium vitis S4 arsenical resistance protein ArsH YP_002547791.1 1086456 D 311402 CDS YP_002547792.1 222107001 7380890 1087151..1088401 1 NC_011988.1 hypothetical protein 1088401 7380890 Avi_6069 Agrobacterium vitis S4 hypothetical protein YP_002547792.1 1087151 D 311402 CDS YP_002547793.1 222107002 7380891 complement(1088423..1089109) 1 NC_011988.1 two component response regulator 1089109 kdpE 7380891 kdpE Agrobacterium vitis S4 two component response regulator YP_002547793.1 1088423 R 311402 CDS YP_002547794.1 222107003 7380892 complement(1089106..1091814) 1 NC_011988.1 two component sensor kinase 1091814 kdpD 7380892 kdpD Agrobacterium vitis S4 two component sensor kinase YP_002547794.1 1089106 R 311402 CDS YP_002547795.1 222107004 7380893 complement(1091824..1092399) 1 NC_011988.1 K+-transporting ATPase C subunit 1092399 kdpC 7380893 kdpC Agrobacterium vitis S4 K+-transporting ATPase C subunit YP_002547795.1 1091824 R 311402 CDS YP_002547796.1 222107005 7380894 complement(1092402..1094465) 1 NC_011988.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1094465 kdpB 7380894 kdpB Agrobacterium vitis S4 potassium-transporting ATPase subunit B YP_002547796.1 1092402 R 311402 CDS YP_002547797.1 222107006 7380895 complement(1094484..1096193) 1 NC_011988.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1096193 kdpA 7380895 kdpA Agrobacterium vitis S4 potassium-transporting ATPase subunit A YP_002547797.1 1094484 R 311402 CDS YP_002547798.1 222107007 7380896 complement(1096680..1098482) 1 NC_011988.1 membrane protein 1098482 7380896 Avi_6076 Agrobacterium vitis S4 membrane protein YP_002547798.1 1096680 R 311402 CDS YP_002547799.1 222107008 7380897 1098878..1100734 1 NC_011988.1 ATP-dependent DNA helicase RecQ 1100734 recQ 7380897 recQ Agrobacterium vitis S4 ATP-dependent DNA helicase RecQ YP_002547799.1 1098878 D 311402 CDS YP_002547800.1 222107009 7380898 1100750..1102015 1 NC_011988.1 hypothetical protein 1102015 7380898 Avi_6078 Agrobacterium vitis S4 hypothetical protein YP_002547800.1 1100750 D 311402 CDS YP_002547801.1 222107010 7380733 complement(1102029..1103294) 1 NC_011988.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 1103294 dadA 7380733 dadA Agrobacterium vitis S4 D-amino acid dehydrogenase small subunit YP_002547801.1 1102029 R 311402 CDS YP_002547802.1 222107011 7380734 complement(1103312..1104436) 1 NC_011988.1 alanine racemase 1104436 alr 7380734 alr Agrobacterium vitis S4 alanine racemase YP_002547802.1 1103312 R 311402 CDS YP_002547803.1 222107012 7380735 1104593..1105027 1 NC_011988.1 transcriptional regulator 1105027 7380735 Avi_6081 Agrobacterium vitis S4 transcriptional regulator YP_002547803.1 1104593 D 311402 CDS YP_002547804.1 222107013 7380736 1105129..1105821 1 NC_011988.1 GntR family transcriptional regulator 1105821 7380736 Avi_6082 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547804.1 1105129 D 311402 CDS YP_002547805.1 222107014 7380737 1105923..1106525 1 NC_011988.1 hypothetical protein 1106525 7380737 Avi_6083 Agrobacterium vitis S4 hypothetical protein YP_002547805.1 1105923 D 311402 CDS YP_002547806.1 222107015 7380738 1106540..1107376 1 NC_011988.1 hydrolase 1107376 7380738 Avi_6084 Agrobacterium vitis S4 hydrolase YP_002547806.1 1106540 D 311402 CDS YP_002547807.1 222107016 7380739 1107408..1108328 1 NC_011988.1 flavoprotein oxidoreductase 1108328 7380739 Avi_6086 Agrobacterium vitis S4 flavoprotein oxidoreductase YP_002547807.1 1107408 D 311402 CDS YP_002547808.1 222107017 7380740 1108332..1109369 1 NC_011988.1 alkanal monooxygenase alpha chain 1109369 7380740 Avi_6087 Agrobacterium vitis S4 alkanal monooxygenase alpha chain YP_002547808.1 1108332 D 311402 CDS YP_002547809.1 222107018 7380741 1109374..1110837 1 NC_011988.1 aldehyde dehydrogenase 1110837 dhaS 7380741 dhaS Agrobacterium vitis S4 aldehyde dehydrogenase YP_002547809.1 1109374 D 311402 CDS YP_002547810.1 222107019 7380742 1110919..1111929 1 NC_011988.1 ABC transporter substrate binding protein (polyamine) 1111929 7380742 Avi_6089 Agrobacterium vitis S4 ABC transporter substrate binding protein (polyamine) YP_002547810.1 1110919 D 311402 CDS YP_002547811.1 222107020 7380743 1112017..1112919 1 NC_011988.1 polyamine ABC transporter permease 1112919 7380743 Avi_6090 Agrobacterium vitis S4 polyamine ABC transporter permease YP_002547811.1 1112017 D 311402 CDS YP_002547812.1 222107021 7380744 1112921..1113721 1 NC_011988.1 polyamine ABC transporter permease 1113721 7380744 Avi_6091 Agrobacterium vitis S4 polyamine ABC transporter permease YP_002547812.1 1112921 D 311402 CDS YP_002547813.1 222107022 7380745 1113718..1114794 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (polyamine) 1114794 7380745 Avi_6092 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (polyamine) YP_002547813.1 1113718 D 311402 CDS YP_002547814.1 222107023 7380746 1114954..1116345 1 NC_011988.1 NAD-dependent succinate aldehyde dehydrogenase 1116345 attK 7380746 attK Agrobacterium vitis S4 NAD-dependent succinate aldehyde dehydrogenase YP_002547814.1 1114954 D 311402 CDS YP_002547815.1 222107024 7380747 complement(1116447..1117271) 1 NC_011988.1 hypothetical protein 1117271 7380747 Avi_6094 Agrobacterium vitis S4 hypothetical protein YP_002547815.1 1116447 R 311402 CDS YP_002547816.1 222107025 7380748 complement(1117292..1117717) 1 NC_011988.1 hypothetical protein 1117717 7380748 Avi_6095 Agrobacterium vitis S4 hypothetical protein YP_002547816.1 1117292 R 311402 CDS YP_002547817.1 222107026 7380749 complement(1117737..1118768) 1 NC_011988.1 D-threo-aldose 1-dehydrogenase 1118768 fdh 7380749 fdh Agrobacterium vitis S4 D-threo-aldose 1-dehydrogenase YP_002547817.1 1117737 R 311402 CDS YP_002547818.1 222107027 7380750 complement(1118785..1119792) 1 NC_011988.1 sugar ABC transporter permease 1119792 7380750 Avi_6097 Agrobacterium vitis S4 sugar ABC transporter permease YP_002547818.1 1118785 R 311402 CDS YP_002547819.1 222107028 7380751 complement(1119796..1120788) 1 NC_011988.1 ribose ABC transporter permease 1120788 rbsC 7380751 rbsC Agrobacterium vitis S4 ribose ABC transporter permease YP_002547819.1 1119796 R 311402 CDS YP_002547820.1 222107029 7380752 complement(1120785..1122293) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (ribose) 1122293 rbsA 7380752 rbsA Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (ribose) YP_002547820.1 1120785 R 311402 CDS YP_002547821.1 222107030 7380753 complement(1122365..1123402) 1 NC_011988.1 carbohydrate binding protein 1123402 7380753 Avi_6100 Agrobacterium vitis S4 carbohydrate binding protein YP_002547821.1 1122365 R 311402 CDS YP_002547822.1 222107031 7380754 complement(1123445..1124557) 1 NC_011988.1 dehydrogenase 1124557 7380754 Avi_6101 Agrobacterium vitis S4 dehydrogenase YP_002547822.1 1123445 R 311402 CDS YP_002547823.1 222107032 7380755 1124848..1125537 1 NC_011988.1 GntR family transcriptional regulator 1125537 7380755 Avi_6102 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547823.1 1124848 D 311402 CDS YP_002547824.1 222107033 7380756 1125534..1127066 1 NC_011988.1 D-galactarate dehydratase 1127066 garD 7380756 garD Agrobacterium vitis S4 D-galactarate dehydratase YP_002547824.1 1125534 D 311402 CDS YP_002547825.1 222107034 7380757 1127177..1128742 1 NC_011988.1 dehydrogenase 1128742 7380757 Avi_6104 Agrobacterium vitis S4 dehydrogenase YP_002547825.1 1127177 D 311402 CDS YP_002547826.1 222107035 7380758 1128777..1129574 1 NC_011988.1 short-chain dehydrogenase/reductase 1129574 7380758 Avi_6105 Agrobacterium vitis S4 short-chain dehydrogenase/reductase YP_002547826.1 1128777 D 311402 CDS YP_002547827.1 222107036 7380759 1129605..1130729 1 NC_011988.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 1130729 gldA 7380759 gldA Agrobacterium vitis S4 glycerol dehydrogenase YP_002547827.1 1129605 D 311402 CDS YP_002547828.1 222107037 7380760 complement(1130754..1132157) 1 NC_011988.1 two component sensor kinase 1132157 tctE 7380760 tctE Agrobacterium vitis S4 two component sensor kinase YP_002547828.1 1130754 R 311402 CDS YP_002547829.1 222107038 7380761 complement(1132154..1132834) 1 NC_011988.1 two component response regulator 1132834 tctD 7380761 tctD Agrobacterium vitis S4 two component response regulator YP_002547829.1 1132154 R 311402 CDS YP_002547830.1 222107039 7380762 1132962..1134086 1 NC_011988.1 ABC transporter substrate binding protein (iron) 1134086 7380762 Avi_6109 Agrobacterium vitis S4 ABC transporter substrate binding protein (iron) YP_002547830.1 1132962 D 311402 CDS YP_002547831.1 222107040 7380763 1134339..1135283 1 NC_011988.1 hypothetical protein 1135283 7380763 Avi_6110 Agrobacterium vitis S4 hypothetical protein YP_002547831.1 1134339 D 311402 CDS YP_002547832.1 222107041 7380764 1135280..1135774 1 NC_011988.1 hypothetical protein 1135774 7380764 Avi_6111 Agrobacterium vitis S4 hypothetical protein YP_002547832.1 1135280 D 311402 CDS YP_002547833.1 222107042 7380765 1135797..1137314 1 NC_011988.1 hypothetical protein 1137314 7380765 Avi_6112 Agrobacterium vitis S4 hypothetical protein YP_002547833.1 1135797 D 311402 CDS YP_002547834.1 222107043 7380766 1137606..1137773 1 NC_011988.1 hypothetical protein 1137773 7380766 Avi_6114 Agrobacterium vitis S4 hypothetical protein YP_002547834.1 1137606 D 311402 CDS YP_002547835.1 222107044 7380767 complement(1137868..1138929) 1 NC_011988.1 hypothetical protein 1138929 7380767 Avi_6115 Agrobacterium vitis S4 hypothetical protein YP_002547835.1 1137868 R 311402 CDS YP_002547836.1 222107045 7380768 complement(1139326..1140531) 1 NC_011988.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 1140531 pcaF 7380768 pcaF Agrobacterium vitis S4 beta-ketoadipyl CoA thiolase YP_002547836.1 1139326 R 311402 CDS YP_002547837.1 222107046 7380769 complement(1140541..1141230) 1 NC_011988.1 3-oxoadipate CoA-transferase subunit B 1141230 pcaJ 7380769 pcaJ Agrobacterium vitis S4 3-oxoadipate CoA-transferase subunit B YP_002547837.1 1140541 R 311402 CDS YP_002547838.1 222107047 7380770 complement(1141227..1141934) 1 NC_011988.1 3-oxoadipate CoA-transferase subunit A 1141934 pcaI 7380770 pcaI Agrobacterium vitis S4 3-oxoadipate CoA-transferase subunit A YP_002547838.1 1141227 R 311402 CDS YP_002547839.1 222107048 7380771 1142036..1142842 1 NC_011988.1 transcriptional regulator IclR family 1142842 pcaR 7380771 pcaR Agrobacterium vitis S4 transcriptional regulator IclR family YP_002547839.1 1142036 D 311402 CDS YP_002547840.1 222107049 7380772 complement(1142817..1143743) 1 NC_011988.1 AraC family transcriptional regulator 1143743 pobR 7380772 pobR Agrobacterium vitis S4 AraC family transcriptional regulator YP_002547840.1 1142817 R 311402 CDS YP_002547841.1 222107050 7380773 1143860..1145032 1 NC_011988.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 1145032 pobA 7380773 pobA Agrobacterium vitis S4 4-hydroxybenzoate 3-monooxygenase YP_002547841.1 1143860 D 311402 CDS YP_002547842.1 222107051 7380774 complement(1145041..1145895) 1 NC_011988.1 pca operon transcription factor PcaQ 1145895 pcaQ 7380774 pcaQ Agrobacterium vitis S4 pca operon transcription factor PcaQ YP_002547842.1 1145041 R 311402 CDS YP_002547843.1 222107052 7380775 1146054..1146845 1 NC_011988.1 3-oxoadipate enol-lactonase 1146845 pcaD 7380775 pcaD Agrobacterium vitis S4 3-oxoadipate enol-lactonase YP_002547843.1 1146054 D 311402 CDS YP_002547844.1 222107053 7380776 1146888..1147298 1 NC_011988.1 4-carboxymuconolactone decarboxylase 1147298 pcaC 7380776 pcaC Agrobacterium vitis S4 4-carboxymuconolactone decarboxylase YP_002547844.1 1146888 D 311402 CDS YP_002547845.1 222107054 7380777 1147344..1148084 1 NC_011988.1 protocatechuate 3,4-dioxygenase beta subunit 1148084 pcaH 7380777 pcaH Agrobacterium vitis S4 protocatechuate 3,4-dioxygenase beta subunit YP_002547845.1 1147344 D 311402 CDS YP_002547846.1 222107055 7380778 1148086..1148703 1 NC_011988.1 protocatechuate 3,4-dioxygenase alpha subunit 1148703 pcaG 7380778 pcaG Agrobacterium vitis S4 protocatechuate 3,4-dioxygenase alpha subunit YP_002547846.1 1148086 D 311402 CDS YP_002547847.1 222107056 7380779 1148712..1149770 1 NC_011988.1 Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase 1149770 pcaB 7380779 pcaB Agrobacterium vitis S4 3-carboxy-cis,cis-muconate cycloisomerase YP_002547847.1 1148712 D 311402 CDS YP_002547848.1 222107057 7380780 complement(1149811..1150806) 1 NC_011988.1 zinc-binding alcohol dehydrogenase 1150806 7380780 Avi_6131 Agrobacterium vitis S4 zinc-binding alcohol dehydrogenase YP_002547848.1 1149811 R 311402 CDS YP_002547849.1 222107058 7380781 1151218..1154082 1 NC_011988.1 ftsK cell division protein 1154082 ftsK 7380781 ftsK Agrobacterium vitis S4 ftsK cell division protein YP_002547849.1 1151218 D 311402 CDS YP_002547850.1 222107059 7380782 complement(1154309..1155355) 1 NC_011988.1 ABC transporter 1155355 7380782 Avi_6134 Agrobacterium vitis S4 ABC transporter YP_002547850.1 1154309 R 311402 CDS YP_002547851.1 222107060 7380783 complement(1155352..1156893) 1 NC_011988.1 ABC transporter permease 1156893 7380783 Avi_6135 Agrobacterium vitis S4 ABC transporter permease YP_002547851.1 1155352 R 311402 CDS YP_002547852.1 222107061 7380784 complement(1157144..1158133) 1 NC_011988.1 ABC transporter substrate binding protein (iron) 1158133 7380784 Avi_6136 Agrobacterium vitis S4 ABC transporter substrate binding protein (iron) YP_002547852.1 1157144 R 311402 CDS YP_002547853.1 222107062 7380785 complement(1158465..1160642) 1 NC_011988.1 hypothetical protein 1160642 7380785 Avi_6137 Agrobacterium vitis S4 hypothetical protein YP_002547853.1 1158465 R 311402 CDS YP_002547854.1 222107063 7380786 complement(1160804..1161277) 1 NC_011988.1 hypothetical protein 1161277 7380786 Avi_6139 Agrobacterium vitis S4 hypothetical protein YP_002547854.1 1160804 R 311402 CDS YP_002547855.1 222107064 7380787 1161500..1161862 1 NC_011988.1 hypothetical protein 1161862 7380787 Avi_6140 Agrobacterium vitis S4 hypothetical protein YP_002547855.1 1161500 D 311402 CDS YP_002547856.1 222107065 7380788 1162623..1164434 1 NC_011988.1 ABC transporter ATPase 1164434 exsA 7380788 exsA Agrobacterium vitis S4 ABC transporter ATPase YP_002547856.1 1162623 D 311402 CDS YP_002547857.1 222107066 7380789 complement(1164497..1165798) 1 NC_011988.1 Signal transduction histidine kinase 1165798 7380789 Avi_6144 Agrobacterium vitis S4 Signal transduction histidine kinase YP_002547857.1 1164497 R 311402 CDS YP_002547858.1 222107067 7380790 complement(1165798..1166487) 1 NC_011988.1 two component response regulator 1166487 7380790 Avi_6145 Agrobacterium vitis S4 two component response regulator YP_002547858.1 1165798 R 311402 CDS YP_002547859.1 222107068 7380791 1166745..1167497 1 NC_011988.1 membrane protein 1167497 7380791 Avi_6146 Agrobacterium vitis S4 membrane protein YP_002547859.1 1166745 D 311402 CDS YP_002547860.1 222107069 7381167 complement(1167800..1168834) 1 NC_011988.1 Integrase 1168834 7381167 Avi_6147 Agrobacterium vitis S4 Integrase YP_002547860.1 1167800 R 311402 CDS YP_002547861.1 222107070 7380793 complement(1168847..1169101) 1 NC_011988.1 hypothetical protein 1169101 7380793 Avi_6148 Agrobacterium vitis S4 hypothetical protein YP_002547861.1 1168847 R 311402 CDS YP_002547862.1 222107071 7380794 complement(1170141..1170488) 1 NC_011988.1 bacteriophage protein 1170488 7380794 Avi_6150 Agrobacterium vitis S4 bacteriophage protein YP_002547862.1 1170141 R 311402 CDS YP_002547863.1 222107072 7380795 complement(1170804..1171625) 1 NC_011988.1 hypothetical protein 1171625 7380795 Avi_6151 Agrobacterium vitis S4 hypothetical protein YP_002547863.1 1170804 R 311402 CDS YP_002547864.1 222107073 7380796 complement(1171622..1172365) 1 NC_011988.1 hypothetical protein 1172365 7380796 Avi_6152 Agrobacterium vitis S4 hypothetical protein YP_002547864.1 1171622 R 311402 CDS YP_002547865.1 222107074 7380797 complement(1172347..1172892) 1 NC_011988.1 hypothetical protein 1172892 7380797 Avi_6153 Agrobacterium vitis S4 hypothetical protein YP_002547865.1 1172347 R 311402 CDS YP_002547866.1 222107075 7380798 complement(1172885..1174021) 1 NC_011988.1 DNA polymerase III beta subunit 1174021 dnaN 7380798 dnaN Agrobacterium vitis S4 DNA polymerase III beta subunit YP_002547866.1 1172885 R 311402 CDS YP_002547867.1 222107076 7380799 complement(1174222..1174587) 1 NC_011988.1 hypothetical protein 1174587 7380799 Avi_6155 Agrobacterium vitis S4 hypothetical protein YP_002547867.1 1174222 R 311402 CDS YP_002547868.1 222107077 7380800 complement(1174738..1175061) 1 NC_011988.1 hypothetical protein 1175061 7380800 Avi_6157 Agrobacterium vitis S4 hypothetical protein YP_002547868.1 1174738 R 311402 CDS YP_002547869.1 222107078 7380801 complement(1175228..1175548) 1 NC_011988.1 hypothetical protein 1175548 7380801 Avi_6158 Agrobacterium vitis S4 hypothetical protein YP_002547869.1 1175228 R 311402 CDS YP_002547870.1 222107079 7380802 complement(1175980..1176852) 1 NC_011988.1 transcriptional regulator 1176852 7380802 Avi_6161 Agrobacterium vitis S4 transcriptional regulator YP_002547870.1 1175980 R 311402 CDS YP_002547871.1 222107080 7380803 complement(1176917..1177267) 1 NC_011988.1 hypothetical protein 1177267 7380803 Avi_6162 Agrobacterium vitis S4 hypothetical protein YP_002547871.1 1176917 R 311402 CDS YP_002547872.1 222107081 7380804 1177459..1178076 1 NC_011988.1 hypothetical protein 1178076 7380804 Avi_6163 Agrobacterium vitis S4 hypothetical protein YP_002547872.1 1177459 D 311402 CDS YP_002547873.1 222107082 7380805 1178083..1178481 1 NC_011988.1 hypothetical protein 1178481 7380805 Avi_6164 Agrobacterium vitis S4 hypothetical protein YP_002547873.1 1178083 D 311402 CDS YP_002547874.1 222107083 7380806 complement(1179028..1179360) 1 NC_011988.1 hypothetical protein 1179360 7380806 Avi_6165 Agrobacterium vitis S4 hypothetical protein YP_002547874.1 1179028 R 311402 CDS YP_002547875.1 222107084 7380807 1179433..1179627 1 NC_011988.1 hypothetical protein 1179627 7380807 Avi_6166 Agrobacterium vitis S4 hypothetical protein YP_002547875.1 1179433 D 311402 CDS YP_002547876.1 222107085 7380808 1179624..1180028 1 NC_011988.1 hypothetical protein 1180028 7380808 Avi_6167 Agrobacterium vitis S4 hypothetical protein YP_002547876.1 1179624 D 311402 CDS YP_002547877.1 222107086 7380809 1180097..1180555 1 NC_011988.1 hypothetical protein 1180555 7380809 Avi_6168 Agrobacterium vitis S4 hypothetical protein YP_002547877.1 1180097 D 311402 CDS YP_002547878.1 222107087 7380810 1181421..1183196 1 NC_011988.1 hypothetical protein 1183196 7380810 Avi_6173 Agrobacterium vitis S4 hypothetical protein YP_002547878.1 1181421 D 311402 CDS YP_002547879.1 222107088 7380811 1183422..1183769 1 NC_011988.1 hypothetical protein 1183769 7380811 Avi_6175 Agrobacterium vitis S4 hypothetical protein YP_002547879.1 1183422 D 311402 CDS YP_002547880.1 222107089 7380812 1183766..1184938 1 NC_011988.1 DNA-cytosine methyltransferase 1184938 7380812 Avi_6177 Agrobacterium vitis S4 DNA-cytosine methyltransferase YP_002547880.1 1183766 D 311402 CDS YP_002547881.1 222107090 7380813 1184935..1186230 1 NC_011988.1 hypothetical protein 1186230 7380813 Avi_6178 Agrobacterium vitis S4 hypothetical protein YP_002547881.1 1184935 D 311402 CDS YP_002547882.1 222107091 7380814 1187055..1187486 1 NC_011988.1 prophage LambdaSo holin 1187486 7380814 Avi_6179 Agrobacterium vitis S4 prophage LambdaSo holin YP_002547882.1 1187055 D 311402 CDS YP_002547883.1 222107092 7380815 1187623..1188264 1 NC_011988.1 phage terminase small subunit P27 family 1188264 7380815 Avi_6181 Agrobacterium vitis S4 phage terminase small subunit P27 family YP_002547883.1 1187623 D 311402 CDS YP_002547884.1 222107093 7381238 1188275..1190017 1 NC_011988.1 phage terminase-like protein large subunit 1190017 7381238 Avi_6182 Agrobacterium vitis S4 phage terminase-like protein large subunit YP_002547884.1 1188275 D 311402 CDS YP_002547885.1 222107094 7381239 1190017..1191261 1 NC_011988.1 portal protein 1191261 7381239 Avi_6184 Agrobacterium vitis S4 portal protein YP_002547885.1 1190017 D 311402 CDS YP_002547886.1 222107095 7381240 1191239..1192093 1 NC_011988.1 ClpP-type protease 1192093 7381240 Avi_6185 Agrobacterium vitis S4 ClpP-type protease YP_002547886.1 1191239 D 311402 CDS YP_002547887.1 222107096 7381241 1192103..1193518 1 NC_011988.1 phage major capsid protein HK97 family 1193518 7381241 Avi_6186 Agrobacterium vitis S4 phage major capsid protein HK97 family YP_002547887.1 1192103 D 311402 CDS YP_002547888.1 222107097 7381242 1193571..1194008 1 NC_011988.1 hypothetical protein 1194008 7381242 Avi_6187 Agrobacterium vitis S4 hypothetical protein YP_002547888.1 1193571 D 311402 CDS YP_002547889.1 222107098 7381243 1194071..1194667 1 NC_011988.1 hypothetical protein 1194667 7381243 Avi_6188 Agrobacterium vitis S4 hypothetical protein YP_002547889.1 1194071 D 311402 CDS YP_002547890.1 222107099 7381244 1194667..1194987 1 NC_011988.1 Bacteriophage head-tail adaptor 1194987 7381244 Avi_6189 Agrobacterium vitis S4 Bacteriophage head-tail adaptor YP_002547890.1 1194667 D 311402 CDS YP_002547891.1 222107100 7381245 1194991..1195437 1 NC_011988.1 hypothetical protein 1195437 7381245 Avi_6190 Agrobacterium vitis S4 hypothetical protein YP_002547891.1 1194991 D 311402 CDS YP_002547892.1 222107101 7381246 1195441..1195836 1 NC_011988.1 hypothetical protein 1195836 7381246 Avi_6192 Agrobacterium vitis S4 hypothetical protein YP_002547892.1 1195441 D 311402 CDS YP_002547893.1 222107102 7381247 1195854..1196540 1 NC_011988.1 outer capsid protein Hoc 1196540 7381247 Avi_6193 Agrobacterium vitis S4 outer capsid protein Hoc YP_002547893.1 1195854 D 311402 CDS YP_002547894.1 222107103 7381248 1196548..1196931 1 NC_011988.1 hypothetical protein 1196931 7381248 Avi_6194 Agrobacterium vitis S4 hypothetical protein YP_002547894.1 1196548 D 311402 CDS YP_002547895.1 222107104 7381249 1196994..1197245 1 NC_011988.1 hypothetical protein 1197245 7381249 Avi_6195 Agrobacterium vitis S4 hypothetical protein YP_002547895.1 1196994 D 311402 CDS YP_002547896.1 222107105 7381250 1197356..1199635 1 NC_011988.1 phage tail protein 1199635 7381250 Avi_6196 Agrobacterium vitis S4 phage tail protein YP_002547896.1 1197356 D 311402 CDS YP_002547897.1 222107106 7381251 1199635..1200354 1 NC_011988.1 hypothetical protein 1200354 7381251 Avi_6197 Agrobacterium vitis S4 hypothetical protein YP_002547897.1 1199635 D 311402 CDS YP_002547898.1 222107107 7381252 1200357..1200938 1 NC_011988.1 Transcription elongation factor 1200938 7381252 Avi_6198 Agrobacterium vitis S4 Transcription elongation factor YP_002547898.1 1200357 D 311402 CDS YP_002547899.1 222107108 7381253 complement(1200917..1201228) 1 NC_011988.1 hypothetical protein 1201228 7381253 Avi_6199 Agrobacterium vitis S4 hypothetical protein YP_002547899.1 1200917 R 311402 CDS YP_002547900.1 222107109 7381254 1201345..1203510 1 NC_011988.1 hypothetical protein 1203510 7381254 Avi_6201 Agrobacterium vitis S4 hypothetical protein YP_002547900.1 1201345 D 311402 CDS YP_002547901.1 222107110 7381255 1203654..1205477 1 NC_011988.1 D-serine deaminase 1205477 dsd 7381255 dsd Agrobacterium vitis S4 D-serine deaminase YP_002547901.1 1203654 D 311402 CDS YP_002547902.1 222107111 7381256 1205746..1206354 1 NC_011988.1 hypothetical protein 1206354 7381256 Avi_6204 Agrobacterium vitis S4 hypothetical protein YP_002547902.1 1205746 D 311402 CDS YP_002547903.1 222107112 7381257 1206952..1207353 1 NC_011988.1 multidrug resistance efflux pump 1207353 emrA 7381257 emrA Agrobacterium vitis S4 multidrug resistance efflux pump YP_002547903.1 1206952 D 311402 CDS YP_002547904.1 222107113 7381258 1207610..1207930 1 NC_011988.1 hypothetical protein 1207930 7381258 Avi_6209 Agrobacterium vitis S4 hypothetical protein YP_002547904.1 1207610 D 311402 CDS YP_002547905.1 222107114 7381259 1207932..1208453 1 NC_011988.1 hypothetical protein 1208453 7381259 Avi_6210 Agrobacterium vitis S4 hypothetical protein YP_002547905.1 1207932 D 311402 CDS YP_002547906.1 222107115 7381260 1208459..1208752 1 NC_011988.1 hypothetical protein 1208752 7381260 Avi_6211 Agrobacterium vitis S4 hypothetical protein YP_002547906.1 1208459 D 311402 CDS YP_002547907.1 222107116 7381261 complement(1209145..1209897) 1 NC_011988.1 SurF1 family protein 1209897 surf 7381261 surf Agrobacterium vitis S4 SurF1 family protein YP_002547907.1 1209145 R 311402 CDS YP_002547908.1 222107117 7381262 complement(1209962..1210360) 1 NC_011988.1 cytochrome o ubiquinol oxidase subunit IV 1210360 cyoD 7381262 cyoD Agrobacterium vitis S4 cytochrome o ubiquinol oxidase subunit IV YP_002547908.1 1209962 R 311402 CDS YP_002547909.1 222107118 7381263 complement(1210357..1210974) 1 NC_011988.1 cytochrome o ubiquinol oxidase subunit III 1210974 cyoC 7381263 cyoC Agrobacterium vitis S4 cytochrome o ubiquinol oxidase subunit III YP_002547909.1 1210357 R 311402 CDS YP_002547910.1 222107119 7381264 complement(1210979..1212982) 1 NC_011988.1 cytochrome o ubiquinol oxidase subunit I 1212982 cyoB 7381264 cyoB Agrobacterium vitis S4 cytochrome o ubiquinol oxidase subunit I YP_002547910.1 1210979 R 311402 CDS YP_002547911.1 222107120 7381265 complement(1213023..1214135) 1 NC_011988.1 cytochrome o ubiquinol oxidase subunit II 1214135 cyoA 7381265 cyoA Agrobacterium vitis S4 cytochrome o ubiquinol oxidase subunit II YP_002547911.1 1213023 R 311402 CDS YP_002547912.1 222107121 7381266 1214585..1215184 1 NC_011988.1 ECF family sigma factor 1215184 7381266 Avi_6218 Agrobacterium vitis S4 ECF family sigma factor YP_002547912.1 1214585 D 311402 CDS YP_002547913.1 222107122 7381267 1215168..1215992 1 NC_011988.1 transcriptional regulator 1215992 7381267 Avi_6219 Agrobacterium vitis S4 transcriptional regulator YP_002547913.1 1215168 D 311402 CDS YP_002547914.1 222107123 7381268 1216088..1216804 1 NC_011988.1 hypothetical protein 1216804 7381268 Avi_6220 Agrobacterium vitis S4 hypothetical protein YP_002547914.1 1216088 D 311402 CDS YP_002547915.1 222107124 7381269 complement(1216918..1217367) 1 NC_011988.1 pseudoazurin 1217367 7381269 Avi_6221 Agrobacterium vitis S4 pseudoazurin YP_002547915.1 1216918 R 311402 CDS YP_002547916.1 222107125 7381270 1217641..1218354 1 NC_011988.1 denitrification regulatory protein 1218354 nnrU 7381270 nnrU Agrobacterium vitis S4 denitrification regulatory protein YP_002547916.1 1217641 D 311402 CDS YP_002547917.1 222107126 7381271 1218532..1219959 1 NC_011988.1 endo-1,3-1,4-beta-glycanase, C-terminal secretion signal protein 1219959 exsH 7381271 exsH Agrobacterium vitis S4 endo-1,3-1,4-beta-glycanase, C-terminal secretion signal protein YP_002547917.1 1218532 D 311402 CDS YP_002547918.1 222107127 7381165 complement(1220089..1221423) 1 NC_011988.1 C4-dicarboxylate transport protein 1221423 dctA 7381165 dctA Agrobacterium vitis S4 C4-dicarboxylate transport protein YP_002547918.1 1220089 R 311402 CDS YP_002547919.1 222107128 7381273 1221724..1223526 1 NC_011988.1 two component sensor kinase for C4-dicarboxylate transport 1223526 dctB 7381273 dctB Agrobacterium vitis S4 two component sensor kinase for C4-dicarboxylate transport YP_002547919.1 1221724 D 311402 CDS YP_002547920.1 222107129 7381274 1223523..1224899 1 NC_011988.1 two component response regulator for C4-dicarboxylate transport 1224899 dctD 7381274 dctD Agrobacterium vitis S4 two component response regulator for C4-dicarboxylate transport YP_002547920.1 1223523 D 311402 CDS YP_002547921.1 222107130 7381275 complement(1224926..1225648) 1 NC_011988.1 TetR family transcriptional regulator 1225648 7381275 Avi_6229 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002547921.1 1224926 R 311402 CDS YP_002547922.1 222107131 7381276 1225981..1226277 1 NC_011988.1 hypothetical protein 1226277 7381276 Avi_6230 Agrobacterium vitis S4 hypothetical protein YP_002547922.1 1225981 D 311402 CDS YP_002547923.1 222107132 7381277 complement(1226525..1227433) 1 NC_011988.1 transcriptional regulator ROK family 1227433 7381277 Avi_6233 Agrobacterium vitis S4 transcriptional regulator ROK family YP_002547923.1 1226525 R 311402 CDS YP_002547924.1 222107133 7381278 complement(1227430..1228632) 1 NC_011988.1 N-acetylglucosamine-6-phosphate deacetylase 1228632 nagA 7381278 nagA Agrobacterium vitis S4 N-acetylglucosamine-6-phosphate deacetylase YP_002547924.1 1227430 R 311402 CDS YP_002547925.1 222107134 7381279 complement(1228629..1229651) 1 NC_011988.1 glucosamine--fructose-6-phosphate aminotransferase 1229651 glmS 7381279 glmS Agrobacterium vitis S4 glucosamine--fructose-6-phosphate aminotransferase YP_002547925.1 1228629 R 311402 CDS YP_002547926.1 222107135 7381280 complement(1229680..1230432) 1 NC_011988.1 GntR family transcriptional regulator 1230432 7381280 Avi_6236 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547926.1 1229680 R 311402 CDS YP_002547927.1 222107136 7381281 1230864..1232045 1 NC_011988.1 oxidoreductase 1232045 7381281 Avi_6237 Agrobacterium vitis S4 oxidoreductase YP_002547927.1 1230864 D 311402 CDS YP_002547928.1 222107137 7381282 1232055..1232939 1 NC_011988.1 maltose ABC transporter permease 1232939 malF 7381282 malF Agrobacterium vitis S4 maltose ABC transporter permease YP_002547928.1 1232055 D 311402 CDS YP_002547929.1 222107138 7381283 1232936..1233796 1 NC_011988.1 maltose ABC transporter permease 1233796 malG 7381283 malG Agrobacterium vitis S4 maltose ABC transporter permease YP_002547929.1 1232936 D 311402 CDS YP_002547930.1 222107139 7381284 1233853..1235076 1 NC_011988.1 ABC transporter substrate binding protein (maltose) 1235076 malE 7381284 malE Agrobacterium vitis S4 ABC transporter substrate binding protein (maltose) YP_002547930.1 1233853 D 311402 CDS YP_002547931.1 222107140 7381285 1235180..1236313 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (maltose/maltodextrin) 1236313 malK 7381285 malK Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (maltose/maltodextrin) YP_002547931.1 1235180 D 311402 CDS YP_002547932.1 222107141 7381286 complement(1236340..1237440) 1 NC_011988.1 hypothetical protein 1237440 7381286 Avi_6243 Agrobacterium vitis S4 hypothetical protein YP_002547932.1 1236340 R 311402 CDS YP_002547933.1 222107142 7381287 complement(1237442..1238746) 1 NC_011988.1 hypothetical protein 1238746 7381287 Avi_6244 Agrobacterium vitis S4 hypothetical protein YP_002547933.1 1237442 R 311402 CDS YP_002547934.1 222107143 7381288 complement(1238963..1239454) 1 NC_011988.1 hypothetical protein 1239454 7381288 Avi_6246 Agrobacterium vitis S4 hypothetical protein YP_002547934.1 1238963 R 311402 CDS YP_002547935.1 222107144 7381289 1239567..1239953 1 NC_011988.1 translation initiation inhibitor 1239953 7381289 Avi_6248 Agrobacterium vitis S4 translation initiation inhibitor YP_002547935.1 1239567 D 311402 CDS YP_002547936.1 222107145 7381290 1239973..1240836 1 NC_011988.1 transcriptional regulator RpiR family 1240836 7381290 Avi_6249 Agrobacterium vitis S4 transcriptional regulator RpiR family YP_002547936.1 1239973 D 311402 CDS YP_002547937.1 222107146 7381291 1240838..1241614 1 NC_011988.1 short chain dehydrogenase 1241614 7381291 Avi_6250 Agrobacterium vitis S4 short chain dehydrogenase YP_002547937.1 1240838 D 311402 CDS YP_002547938.1 222107147 7381292 1241649..1243568 1 NC_011988.1 beta-N-acetylhexosaminidase 1243568 7381292 Avi_6251 Agrobacterium vitis S4 beta-N-acetylhexosaminidase YP_002547938.1 1241649 D 311402 CDS YP_002547939.1 222107148 7381293 1243580..1245046 1 NC_011988.1 hypothetical protein 1245046 7381293 Avi_6252 Agrobacterium vitis S4 hypothetical protein YP_002547939.1 1243580 D 311402 CDS YP_002547940.1 222107149 7381294 1245155..1246363 1 NC_011988.1 MFS permease 1246363 7381294 Avi_6253 Agrobacterium vitis S4 MFS permease YP_002547940.1 1245155 D 311402 CDS YP_002547941.1 222107150 7381295 1246388..1247143 1 NC_011988.1 copper homeostasis protein 1247143 cutC 7381295 cutC Agrobacterium vitis S4 copper homeostasis protein YP_002547941.1 1246388 D 311402 CDS YP_002547942.1 222107151 7381296 complement(1247148..1247540) 1 NC_011988.1 acyl-CoA hydrolase 1247540 7381296 Avi_6255 Agrobacterium vitis S4 acyl-CoA hydrolase YP_002547942.1 1247148 R 311402 CDS YP_002547943.1 222107152 7381297 complement(1247700..1248359) 1 NC_011988.1 Transcriptional regulator 1248359 7381297 Avi_6256 Agrobacterium vitis S4 Transcriptional regulator YP_002547943.1 1247700 R 311402 CDS YP_002547944.1 222107153 7381298 1248589..1251060 1 NC_011988.1 hypothetical protein 1251060 7381298 Avi_6257 Agrobacterium vitis S4 hypothetical protein YP_002547944.1 1248589 D 311402 CDS YP_002547945.1 222107154 7381299 complement(1251069..1252391) 1 NC_011988.1 two component sensor kinase 1252391 7381299 Avi_6258 Agrobacterium vitis S4 two component sensor kinase YP_002547945.1 1251069 R 311402 CDS YP_002547946.1 222107155 7381300 complement(1252388..1253050) 1 NC_011988.1 two component response regulator 1253050 7381300 Avi_6259 Agrobacterium vitis S4 two component response regulator YP_002547946.1 1252388 R 311402 CDS YP_002547947.1 222107156 7381301 1253311..1253571 1 NC_011988.1 hypothetical protein 1253571 7381301 Avi_6260 Agrobacterium vitis S4 hypothetical protein YP_002547947.1 1253311 D 311402 CDS YP_002547948.1 222107157 7381166 complement(1253825..1254616) 1 NC_011988.1 hypothetical protein 1254616 7381166 Avi_6262 Agrobacterium vitis S4 hypothetical protein YP_002547948.1 1253825 R 311402 CDS YP_002547949.1 222107158 7381303 complement(1254654..1255946) 1 NC_011988.1 L-rhamnose catabolism isomerase 1255946 rhaI 7381303 rhaI Agrobacterium vitis S4 L-rhamnose catabolism isomerase YP_002547949.1 1254654 R 311402 CDS YP_002547950.1 222107159 7381304 complement(1255985..1258096) 1 NC_011988.1 short chain dehydrogenase 1258096 rhaD 7381304 rhaD Agrobacterium vitis S4 short chain dehydrogenase YP_002547950.1 1255985 R 311402 CDS YP_002547951.1 222107160 7381305 1258297..1259109 1 NC_011988.1 transcriptional regulator DeoR family 1259109 7381305 Avi_6265 Agrobacterium vitis S4 transcriptional regulator DeoR family YP_002547951.1 1258297 D 311402 CDS YP_002547952.1 222107161 7381306 1259165..1260160 1 NC_011988.1 rhamnose ABC transporter rhamnose-binding protein 1260160 rhaS 7381306 rhaS Agrobacterium vitis S4 rhamnose ABC transporter rhamnose-binding protein YP_002547952.1 1259165 D 311402 CDS YP_002547953.1 222107162 7381307 1260267..1261802 1 NC_011988.1 ABC transporter ATPase 1261802 7381307 Avi_6267 Agrobacterium vitis S4 ABC transporter ATPase YP_002547953.1 1260267 D 311402 CDS YP_002547954.1 222107163 7381308 1261812..1262813 1 NC_011988.1 ABC transporter permease 1262813 7381308 Avi_6268 Agrobacterium vitis S4 ABC transporter permease YP_002547954.1 1261812 D 311402 CDS YP_002547955.1 222107164 7381309 1262810..1263823 1 NC_011988.1 ABC transporter permease 1263823 7381309 Avi_6269 Agrobacterium vitis S4 ABC transporter permease YP_002547955.1 1262810 D 311402 CDS YP_002547956.1 222107165 7381310 1263826..1264149 1 NC_011988.1 L-rhamnose 1-epimerase 1264149 rhaU 7381310 rhaU Agrobacterium vitis S4 L-rhamnose 1-epimerase YP_002547956.1 1263826 D 311402 CDS YP_002547957.1 222107166 7381311 1264146..1265552 1 NC_011988.1 sugar kinase 1265552 7381311 Avi_6271 Agrobacterium vitis S4 sugar kinase YP_002547957.1 1264146 D 311402 CDS YP_002547958.1 222107167 7381312 1265676..1266527 1 NC_011988.1 fumarylacetoacetate (FAA) hydrolase family protein 1266527 7381312 Avi_6272 Agrobacterium vitis S4 fumarylacetoacetate (FAA) hydrolase family protein YP_002547958.1 1265676 D 311402 CDS YP_002547959.1 222107168 7381313 1266820..1268709 1 NC_011988.1 GGDEF family protein 1268709 7381313 Avi_6273 Agrobacterium vitis S4 GGDEF family protein YP_002547959.1 1266820 D 311402 CDS YP_002547960.1 222107169 7381314 complement(1268642..1269418) 1 NC_011988.1 hydantoin Racemase 1269418 7381314 Avi_6274 Agrobacterium vitis S4 hydantoin Racemase YP_002547960.1 1268642 R 311402 CDS YP_002547961.1 222107170 7381315 complement(1269443..1270261) 1 NC_011988.1 spermidine/putrescine ABC transporter permease 1270261 7381315 Avi_6275 Agrobacterium vitis S4 spermidine/putrescine ABC transporter permease YP_002547961.1 1269443 R 311402 CDS YP_002547962.1 222107171 7381316 complement(1270265..1271170) 1 NC_011988.1 spermidine/putrescine ABC transporter permease 1271170 7381316 Avi_6277 Agrobacterium vitis S4 spermidine/putrescine ABC transporter permease YP_002547962.1 1270265 R 311402 CDS YP_002547963.1 222107172 7381317 complement(1271249..1272538) 1 NC_011988.1 ABC transporter substrate binding protein (spermidine/putrescine) 1272538 7381317 Avi_6278 Agrobacterium vitis S4 ABC transporter substrate binding protein (spermidine/putrescine) YP_002547963.1 1271249 R 311402 CDS YP_002547964.1 222107173 7381318 complement(1272566..1273690) 1 NC_011988.1 ABC transporter nucleotide binding/ATPase (spermidine/putrescine) 1273690 7381318 Avi_6279 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (spermidine/putrescine) YP_002547964.1 1272566 R 311402 CDS YP_002547965.1 222107174 7381319 1273920..1274630 1 NC_011988.1 GntR family transcriptional regulator 1274630 7381319 Avi_6280 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002547965.1 1273920 D 311402 CDS YP_002547966.1 222107175 7381320 1274869..1275747 1 NC_011988.1 hypothetical protein 1275747 7381320 Avi_6281 Agrobacterium vitis S4 hypothetical protein YP_002547966.1 1274869 D 311402 CDS YP_002547967.1 222107176 7381146 1276132..1276680 1 NC_011988.1 DNA-3-methyladenine glycosylase 1276680 7381146 Avi_6283 Agrobacterium vitis S4 DNA-3-methyladenine glycosylase YP_002547967.1 1276132 D 311402 CDS YP_002547968.1 222107177 7381147 1276745..1277401 1 NC_011988.1 ABC transporter ATPase 1277401 attE 7381147 attE Agrobacterium vitis S4 ABC transporter ATPase YP_002547968.1 1276745 D 311402 CDS YP_002547969.1 222107178 7381148 1277401..1279809 1 NC_011988.1 ABC transporter permease 1279809 attG 7381148 attG Agrobacterium vitis S4 ABC transporter permease YP_002547969.1 1277401 D 311402 CDS YP_002547970.1 222107179 7381149 1279799..1280878 1 NC_011988.1 hypothetical protein 1280878 7381149 Avi_6286 Agrobacterium vitis S4 hypothetical protein YP_002547970.1 1279799 D 311402 CDS YP_002547971.1 222107180 7381150 1281038..1282435 1 NC_011988.1 ethanolamine ammonia-lyase large subunit 1282435 7381150 Avi_6287 Agrobacterium vitis S4 ethanolamine ammonia-lyase large subunit YP_002547971.1 1281038 D 311402 CDS YP_002547972.1 222107181 7381151 1282432..1283187 1 NC_011988.1 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 1283187 7381151 Avi_6288 Agrobacterium vitis S4 ethanolamine ammonia-lyase small subunit YP_002547972.1 1282432 D 311402 CDS YP_002547973.1 222147016 7387188 203..1024 1 NC_011989.1 hypothetical protein 1024 7387188 Avi_0001 Agrobacterium vitis S4 hypothetical protein YP_002547973.1 203 D 311402 CDS YP_002547974.1 222147017 7389006 1056..1655 1 NC_011989.1 septum formation inhibitor protein 1655 maf 7389006 maf Agrobacterium vitis S4 septum formation inhibitor protein YP_002547974.1 1056 D 311402 CDS YP_002547975.1 222147018 7389007 1648..2508 1 NC_011989.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 2508 aroE 7389007 aroE Agrobacterium vitis S4 shikimate 5-dehydrogenase YP_002547975.1 1648 D 311402 CDS YP_002547976.1 222147019 7389008 2505..3092 1 NC_011989.1 dephospho-CoA kinase 3092 coaE 7389008 coaE Agrobacterium vitis S4 dephospho-CoA kinase YP_002547976.1 2505 D 311402 CDS YP_002547977.1 222147020 7389009 3187..3897 1 NC_011989.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 3897 dnaQ 7389009 dnaQ Agrobacterium vitis S4 DNA polymerase III subunit epsilon YP_002547977.1 3187 D 311402 CDS YP_002547978.1 222147021 7389010 complement(3977..4438) 1 NC_011989.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 4438 secB 7389010 secB Agrobacterium vitis S4 preprotein translocase subunit SecB YP_002547978.1 3977 R 311402 CDS YP_002547979.1 222147022 7389011 complement(4528..5061) 1 NC_011989.1 hypothetical protein 5061 fxsA 7389011 fxsA Agrobacterium vitis S4 hypothetical protein YP_002547979.1 4528 R 311402 CDS YP_002547980.1 222147023 7389012 5183..5881 1 NC_011989.1 Membrane associated transporter protein 5881 7389012 Avi_0009 Agrobacterium vitis S4 Membrane associated transporter protein YP_002547980.1 5183 D 311402 CDS YP_002547981.1 222147024 7389013 5878..7023 1 NC_011989.1 membrane-bound lytic murein transglycosylase 7023 mltA 7389013 mltA Agrobacterium vitis S4 membrane-bound lytic murein transglycosylase YP_002547981.1 5878 D 311402 CDS YP_002547982.1 222147025 7389014 7062..7601 1 NC_011989.1 DNA repair protein 7601 7389014 Avi_0011 Agrobacterium vitis S4 DNA repair protein YP_002547982.1 7062 D 311402 CDS YP_002547983.1 222147026 7389015 7598..7993 1 NC_011989.1 transcriptional regulator 7993 7389015 Avi_0012 Agrobacterium vitis S4 transcriptional regulator YP_002547983.1 7598 D 311402 CDS YP_002547984.1 222147027 7389016 8119..10554 1 NC_011989.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 10554 gyrB 7389016 gyrB Agrobacterium vitis S4 DNA gyrase subunit B YP_002547984.1 8119 D 311402 CDS YP_002547985.1 222147028 7389017 complement(10715..11311) 1 NC_011989.1 nitroreductase family protein 11311 7389017 Avi_0014 Agrobacterium vitis S4 nitroreductase family protein YP_002547985.1 10715 R 311402 CDS YP_002547986.1 222147029 7389018 11732..13027 1 NC_011989.1 intracellular PHB depolymerase 13027 depA 7389018 depA Agrobacterium vitis S4 intracellular PHB depolymerase YP_002547986.1 11732 D 311402 CDS YP_002547987.1 222147030 7389019 13165..13611 1 NC_011989.1 hypothetical protein 13611 7389019 Avi_0017 Agrobacterium vitis S4 hypothetical protein YP_002547987.1 13165 D 311402 CDS YP_002547988.1 222147031 7389020 13722..14486 1 NC_011989.1 hypothetical protein 14486 7389020 Avi_0018 Agrobacterium vitis S4 hypothetical protein YP_002547988.1 13722 D 311402 CDS YP_002547989.1 222147032 7389021 14528..15202 1 NC_011989.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 15202 trpF 7389021 trpF Agrobacterium vitis S4 N-(5'-phosphoribosyl)anthranilate isomerase YP_002547989.1 14528 D 311402 CDS YP_002547990.1 222147033 7389022 15199..16419 1 NC_011989.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 16419 trpB 7389022 trpB Agrobacterium vitis S4 tryptophan synthase subunit beta YP_002547990.1 15199 D 311402 CDS YP_002547991.1 222147034 7389023 16421..17260 1 NC_011989.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 17260 trpA 7389023 trpA Agrobacterium vitis S4 tryptophan synthase subunit alpha YP_002547991.1 16421 D 311402 CDS YP_002547992.1 222147035 7389024 17395..18315 1 NC_011989.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 18315 7389024 Avi_0022 Agrobacterium vitis S4 acetyl-CoA carboxylase subunit beta YP_002547992.1 17395 D 311402 CDS YP_002547993.1 222147036 7389025 18355..19767 1 NC_011989.1 folylpolyglutamate synthase 19767 folC 7389025 folC Agrobacterium vitis S4 folylpolyglutamate synthase YP_002547993.1 18355 D 311402 CDS YP_002547994.1 222147037 7389026 20263..20913 1 NC_011989.1 hypothetical protein 20913 7389026 Avi_0025 Agrobacterium vitis S4 hypothetical protein YP_002547994.1 20263 D 311402 CDS YP_002547995.1 222147038 7389027 21148..22152 1 NC_011989.1 hypothetical protein 22152 7389027 Avi_0027 Agrobacterium vitis S4 hypothetical protein YP_002547995.1 21148 D 311402 CDS YP_002547996.1 222147039 7389028 complement(22379..22699) 1 NC_011989.1 thioredoxin 22699 trxA 7389028 trxA Agrobacterium vitis S4 thioredoxin YP_002547996.1 22379 R 311402 CDS YP_002547997.1 222147040 7389029 complement(22899..23855) 1 NC_011989.1 hypothetical protein 23855 7389029 Avi_0030 Agrobacterium vitis S4 hypothetical protein YP_002547997.1 22899 R 311402 CDS YP_002547998.1 222147041 7389030 complement(24029..25336) 1 NC_011989.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 25336 hslU 7389030 hslU Agrobacterium vitis S4 ATP-dependent protease ATP-binding subunit HslU YP_002547998.1 24029 R 311402 CDS YP_002547999.1 222147042 7389031 complement(25374..25934) 1 NC_011989.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 25934 hslV 7389031 hslV Agrobacterium vitis S4 ATP-dependent protease peptidase subunit YP_002547999.1 25374 R 311402 CDS YP_002548000.1 222147043 7389032 26129..26725 1 NC_011989.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 26725 hisB 7389032 hisB Agrobacterium vitis S4 imidazoleglycerol-phosphate dehydratase YP_002548000.1 26129 D 311402 CDS YP_002548001.1 222147044 7389033 26753..27403 1 NC_011989.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 27403 hisH 7389033 hisH Agrobacterium vitis S4 imidazole glycerol phosphate synthase subunit HisH YP_002548001.1 26753 D 311402 CDS YP_002548002.1 222147045 7389034 27428..28162 1 NC_011989.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 28162 hisA 7389034 hisA Agrobacterium vitis S4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002548002.1 27428 D 311402 CDS YP_002548003.1 222147046 7389035 28176..28970 1 NC_011989.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 28970 hisF 7389035 hisF Agrobacterium vitis S4 imidazole glycerol phosphate synthase subunit HisF YP_002548003.1 28176 D 311402 CDS YP_002548004.1 222147047 7389036 28983..29297 1 NC_011989.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 29297 hisE 7389036 hisE Agrobacterium vitis S4 phosphoribosyl-ATP pyrophosphatase YP_002548004.1 28983 D 311402 CDS YP_002548005.1 222147048 7389037 29303..30295 1 NC_011989.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 30295 panK 7389037 panK Agrobacterium vitis S4 pantothenate kinase YP_002548005.1 29303 D 311402 CDS YP_002548006.1 222147049 7389038 30362..30940 1 NC_011989.1 hypothetical protein 30940 7389038 Avi_0040 Agrobacterium vitis S4 hypothetical protein YP_002548006.1 30362 D 311402 CDS YP_002548007.1 222147050 7389039 complement(30977..31411) 1 NC_011989.1 peptidyl-tRNA hydrolase domain protein 31411 7389039 Avi_0041 Agrobacterium vitis S4 peptidyl-tRNA hydrolase domain protein YP_002548007.1 30977 R 311402 CDS YP_002548008.1 222147051 7389040 complement(31588..33198) 1 NC_011989.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 33198 pckA 7389040 pckA Agrobacterium vitis S4 phosphoenolpyruvate carboxykinase YP_002548008.1 31588 R 311402 CDS YP_002548009.1 222147052 7389041 33554..34276 1 NC_011989.1 two component response regulator 34276 chvI 7389041 chvI Agrobacterium vitis S4 two component response regulator YP_002548009.1 33554 D 311402 CDS YP_002548010.1 222147053 7389042 34514..36286 1 NC_011989.1 two-component sensor histidine kinase 36286 chvG 7389042 chvG Agrobacterium vitis S4 two-component sensor histidine kinase YP_002548010.1 34514 D 311402 CDS YP_002548011.1 222147054 7389043 36283..36741 1 NC_011989.1 hypothetical protein 36741 7389043 Avi_0046 Agrobacterium vitis S4 hypothetical protein YP_002548011.1 36283 D 311402 CDS YP_002548012.1 222147055 7389044 37102..37503 1 NC_011989.1 PTS system IIA component 37503 7389044 Avi_0047 Agrobacterium vitis S4 PTS system IIA component YP_002548012.1 37102 D 311402 CDS YP_002548013.1 222147056 7389045 37518..37793 1 NC_011989.1 phosphocarrier protein HPr 37793 ptsH 7389045 ptsH Agrobacterium vitis S4 phosphocarrier protein HPr YP_002548013.1 37518 D 311402 CDS YP_002548014.1 222147057 7389046 37838..39367 1 NC_011989.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 39367 ahcY 7389046 ahcY Agrobacterium vitis S4 S-adenosyl-L-homocysteine hydrolase YP_002548014.1 37838 D 311402 CDS YP_002548015.1 222147058 7389047 39579..42314 1 NC_011989.1 two component sensor kinase 42314 7389047 Avi_0050 Agrobacterium vitis S4 two component sensor kinase YP_002548015.1 39579 D 311402 CDS YP_002548016.1 222147059 7389048 42311..43819 1 NC_011989.1 hypothetical protein 43819 7389048 Avi_0051 Agrobacterium vitis S4 hypothetical protein YP_002548016.1 42311 D 311402 CDS YP_002548017.1 222147060 7389049 43973..44686 1 NC_011989.1 nucleotidyltransferase 44686 7389049 Avi_0053 Agrobacterium vitis S4 nucleotidyltransferase YP_002548017.1 43973 D 311402 CDS YP_002548018.1 222147061 7389050 44683..47871 1 NC_011989.1 double-strand break repair protein AddB 47871 addB 7389050 addB Agrobacterium vitis S4 double-strand break repair protein AddB YP_002548018.1 44683 D 311402 CDS YP_002548019.1 222147062 7389051 47864..51412 1 NC_011989.1 ATP-dependent DNA helicase 51412 uvrD 7389051 uvrD Agrobacterium vitis S4 ATP-dependent DNA helicase YP_002548019.1 47864 D 311402 CDS YP_002548020.1 222147063 7389052 51760..53940 1 NC_011989.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 53940 glcB 7389052 glcB Agrobacterium vitis S4 malate synthase G YP_002548020.1 51760 D 311402 CDS YP_002548021.1 222147064 7389053 complement(54130..54828) 1 NC_011989.1 hypothetical protein 54828 7389053 Avi_0061 Agrobacterium vitis S4 hypothetical protein YP_002548021.1 54130 R 311402 CDS YP_002548022.1 222147065 7389054 54930..55490 1 NC_011989.1 hypothetical protein 55490 7389054 Avi_0062 Agrobacterium vitis S4 hypothetical protein YP_002548022.1 54930 D 311402 CDS YP_002548023.1 222147066 7389055 complement(55510..56085) 1 NC_011989.1 two component response regulator 56085 actR 7389055 actR Agrobacterium vitis S4 two component response regulator YP_002548023.1 55510 R 311402 CDS YP_002548024.1 222147067 7389056 complement(56244..57548) 1 NC_011989.1 two component sensor kinase 57548 actS 7389056 actS Agrobacterium vitis S4 two component sensor kinase YP_002548024.1 56244 R 311402 CDS YP_002548025.1 222147068 7389057 complement(57585..60047) 1 NC_011989.1 DEAD box-like helicase 60047 hrpB 7389057 hrpB Agrobacterium vitis S4 DEAD box-like helicase YP_002548025.1 57585 R 311402 CDS YP_002548026.1 222147069 7389058 complement(60130..61086) 1 NC_011989.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 61086 arcB 7389058 arcB Agrobacterium vitis S4 ornithine cyclodeaminase YP_002548026.1 60130 R 311402 CDS YP_002548027.1 222147070 7389060 complement(68353..69735) 1 NC_011989.1 MFS permease 69735 7389060 Avi_0070 Agrobacterium vitis S4 MFS permease YP_002548027.1 68353 R 311402 CDS YP_002548028.1 222147071 7389061 complement(70056..71003) 1 NC_011989.1 dihydrodipicolinate synthase 71003 dapA 7389061 dapA Agrobacterium vitis S4 dihydrodipicolinate synthase YP_002548028.1 70056 R 311402 CDS YP_002548029.1 222147072 7389062 71167..72198 1 NC_011989.1 transcriptional regulator LacI family 72198 7389062 Avi_0072 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002548029.1 71167 D 311402 CDS YP_002548030.1 222147073 7389063 complement(72244..73248) 1 NC_011989.1 hypothetical protein 73248 7389063 Avi_0073 Agrobacterium vitis S4 hypothetical protein YP_002548030.1 72244 R 311402 CDS YP_002548031.1 222147074 7389064 complement(73476..74465) 1 NC_011989.1 myo-inositol 2-dehydrogenase 74465 idhA 7389064 idhA Agrobacterium vitis S4 myo-inositol 2-dehydrogenase YP_002548031.1 73476 R 311402 CDS YP_002548032.1 222147075 7388838 74678..75511 1 NC_011989.1 transcriptional regulator RpiR family 75511 7388838 Avi_0075 Agrobacterium vitis S4 transcriptional regulator RpiR family YP_002548032.1 74678 D 311402 CDS YP_002548033.1 222147076 7388259 75639..77543 1 NC_011989.1 myo-inositol catabolism IolC protein 77543 iolC 7388259 iolC Agrobacterium vitis S4 myo-inositol catabolism IolC protein YP_002548033.1 75639 D 311402 CDS YP_002548034.1 222147077 7388260 77675..79498 1 NC_011989.1 acetolactate synthase 79498 iolD 7388260 iolD Agrobacterium vitis S4 acetolactate synthase YP_002548034.1 77675 D 311402 CDS YP_002548035.1 222147078 7388261 79500..80402 1 NC_011989.1 hypothetical protein 80402 iolE 7388261 iolE Agrobacterium vitis S4 hypothetical protein YP_002548035.1 79500 D 311402 CDS YP_002548036.1 222147079 7388262 80511..80717 1 NC_011989.1 hypothetical protein 80717 7388262 Avi_0079 Agrobacterium vitis S4 hypothetical protein YP_002548036.1 80511 D 311402 CDS YP_002548037.1 222147080 7388263 80714..81532 1 NC_011989.1 hypothetical protein 81532 iolB 7388263 iolB Agrobacterium vitis S4 hypothetical protein YP_002548037.1 80714 D 311402 CDS YP_002548038.1 222147081 7388264 complement(81529..82008) 1 NC_011989.1 hypothetical protein 82008 7388264 Avi_0081 Agrobacterium vitis S4 hypothetical protein YP_002548038.1 81529 R 311402 CDS YP_002548039.1 222147082 7388265 complement(82022..82423) 1 NC_011989.1 hypothetical protein 82423 7388265 Avi_0082 Agrobacterium vitis S4 hypothetical protein YP_002548039.1 82022 R 311402 CDS YP_002548040.1 222147083 7388266 82554..83252 1 NC_011989.1 C factor 83252 csgA 7388266 csgA Agrobacterium vitis S4 C factor YP_002548040.1 82554 D 311402 CDS YP_002548041.1 222147084 7388267 83320..83874 1 NC_011989.1 hypothetical protein 83874 7388267 Avi_0084 Agrobacterium vitis S4 hypothetical protein YP_002548041.1 83320 D 311402 CDS YP_002548042.1 222147085 7388268 83874..84644 1 NC_011989.1 gluconate 5-dehydrogenase 84644 idnO 7388268 idnO Agrobacterium vitis S4 gluconate 5-dehydrogenase YP_002548042.1 83874 D 311402 CDS YP_002548043.1 222147086 7388269 complement(84714..85928) 1 NC_011989.1 cyclopropane-fatty-acyl-phospholipid synthase 85928 7388269 Avi_0086 Agrobacterium vitis S4 cyclopropane-fatty-acyl-phospholipid synthase YP_002548043.1 84714 R 311402 CDS YP_002548044.1 222147087 7388270 complement(85925..86728) 1 NC_011989.1 hypothetical protein 86728 7388270 Avi_0087 Agrobacterium vitis S4 hypothetical protein YP_002548044.1 85925 R 311402 CDS YP_002548045.1 222147088 7388271 complement(86725..88032) 1 NC_011989.1 amine oxidase flavin-containing 88032 7388271 Avi_0088 Agrobacterium vitis S4 amine oxidase flavin-containing YP_002548045.1 86725 R 311402 CDS YP_002548046.1 222147089 7388272 88139..88897 1 NC_011989.1 RNA polymerase sigma subunit protein 88897 7388272 Avi_0089 Agrobacterium vitis S4 RNA polymerase sigma subunit protein YP_002548046.1 88139 D 311402 CDS YP_002548047.1 222147090 7388273 88897..89589 1 NC_011989.1 anti sigma factor protein 89589 7388273 Avi_0090 Agrobacterium vitis S4 anti sigma factor protein YP_002548047.1 88897 D 311402 CDS YP_002548048.1 222147091 7388274 89617..90018 1 NC_011989.1 hypothetical protein 90018 7388274 Avi_0091 Agrobacterium vitis S4 hypothetical protein YP_002548048.1 89617 D 311402 CDS YP_002548049.1 222147092 7388275 90102..90872 1 NC_011989.1 transcriptional regulator DeoR family 90872 glpR 7388275 glpR Agrobacterium vitis S4 transcriptional regulator DeoR family YP_002548049.1 90102 D 311402 CDS YP_002548050.1 222147093 7388276 90949..92499 1 NC_011989.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 92499 glpD 7388276 glpD Agrobacterium vitis S4 glycerol-3-phosphate dehydrogenase YP_002548050.1 90949 D 311402 CDS YP_002548051.1 222147094 7388277 92657..93760 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (sugar) 93760 7388277 Avi_0095 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002548051.1 92657 D 311402 CDS YP_002548052.1 222147095 7388278 93764..94858 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (sugar) 94858 7388278 Avi_0096 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002548052.1 93764 D 311402 CDS YP_002548053.1 222147096 7388279 94855..95742 1 NC_011989.1 sugar ABC transporter permease 95742 7388279 Avi_0097 Agrobacterium vitis S4 sugar ABC transporter permease YP_002548053.1 94855 D 311402 CDS YP_002548054.1 222147097 7388280 95833..96558 1 NC_011989.1 sugar ABC transporter permease 96558 7388280 Avi_0098 Agrobacterium vitis S4 sugar ABC transporter permease YP_002548054.1 95833 D 311402 CDS YP_002548055.1 222147098 7388281 96572..96853 1 NC_011989.1 hypothetical protein 96853 7388281 Avi_0099 Agrobacterium vitis S4 hypothetical protein YP_002548055.1 96572 D 311402 CDS YP_002548056.1 222147099 7388282 96896..98620 1 NC_011989.1 hypothetical protein 98620 7388282 Avi_0100 Agrobacterium vitis S4 hypothetical protein YP_002548056.1 96896 D 311402 CDS YP_002548057.1 222147100 7388283 complement(98774..99331) 1 NC_011989.1 cytochrome c 99331 cycM 7388283 cycM Agrobacterium vitis S4 cytochrome c YP_002548057.1 98774 R 311402 CDS YP_002548058.1 222147101 7388284 99408..100238 1 NC_011989.1 3-deoxy-D-manno-octulosonate cytidylyltransferase 100238 kdsB 7388284 kdsB Agrobacterium vitis S4 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_002548058.1 99408 D 311402 CDS YP_002548059.1 222147102 7388285 100306..101103 1 NC_011989.1 prephenate dehydratase 101103 pheA 7388285 pheA Agrobacterium vitis S4 prephenate dehydratase YP_002548059.1 100306 D 311402 CDS YP_002548060.1 222147103 7388286 complement(101152..103122) 1 NC_011989.1 beta-glucosidase 103122 7388286 Avi_0107 Agrobacterium vitis S4 beta-glucosidase YP_002548060.1 101152 R 311402 CDS YP_002548061.1 222147104 7388287 complement(103412..104377) 1 NC_011989.1 mutT/nudix family protein 104377 7388287 Avi_0108 Agrobacterium vitis S4 mutT/nudix family protein YP_002548061.1 103412 R 311402 CDS YP_002548062.1 222147105 7388288 complement(104374..104817) 1 NC_011989.1 hypothetical protein 104817 7388288 Avi_0109 Agrobacterium vitis S4 hypothetical protein YP_002548062.1 104374 R 311402 CDS YP_002548063.1 222147106 7387990 105085..106980 1 NC_011989.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 106980 dnaX 7387990 dnaX Agrobacterium vitis S4 DNA polymerase III subunits gamma and tau YP_002548063.1 105085 D 311402 CDS YP_002548064.1 222147107 7388290 107080..107403 1 NC_011989.1 hypothetical protein 107403 7388290 Avi_0111 Agrobacterium vitis S4 hypothetical protein YP_002548064.1 107080 D 311402 CDS YP_002548065.1 222147108 7388291 complement(107440..107763) 1 NC_011989.1 hypothetical protein 107763 7388291 Avi_0112 Agrobacterium vitis S4 hypothetical protein YP_002548065.1 107440 R 311402 CDS YP_002548066.1 222147109 7388292 107934..108122 1 NC_011989.1 hypothetical protein 108122 7388292 Avi_0113 Agrobacterium vitis S4 hypothetical protein YP_002548066.1 107934 D 311402 CDS YP_002548067.1 222147110 7388293 complement(108172..108696) 1 NC_011989.1 acetyltransferase 108696 7388293 Avi_0114 Agrobacterium vitis S4 acetyltransferase YP_002548067.1 108172 R 311402 CDS YP_002548068.1 222147111 7388294 complement(108713..109297) 1 NC_011989.1 transcriptional regulatory protein 109297 7388294 Avi_0115 Agrobacterium vitis S4 transcriptional regulatory protein YP_002548068.1 108713 R 311402 CDS YP_002548069.1 222147112 7388295 109515..110468 1 NC_011989.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 110468 ftsZ1 7388295 ftsZ1 Agrobacterium vitis S4 cell division protein FtsZ YP_002548069.1 109515 D 311402 CDS YP_002548070.1 222147113 7388296 110502..112379 1 NC_011989.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 112379 lepA 7388296 lepA Agrobacterium vitis S4 GTP-binding protein LepA YP_002548070.1 110502 D 311402 CDS YP_002548071.1 222147114 7388297 complement(112465..113091) 1 NC_011989.1 ribonuclease D 113091 rnd 7388297 rnd Agrobacterium vitis S4 ribonuclease D YP_002548071.1 112465 R 311402 CDS YP_002548072.1 222147115 7388298 complement(113190..114716) 1 NC_011989.1 sulfatase 114716 7388298 Avi_0122 Agrobacterium vitis S4 sulfatase YP_002548072.1 113190 R 311402 CDS YP_002548073.1 222147116 7388299 complement(114968..115156) 1 NC_011989.1 hypothetical protein 115156 7388299 Avi_0125 Agrobacterium vitis S4 hypothetical protein YP_002548073.1 114968 R 311402 CDS YP_002548074.1 222147117 7388300 115395..116840 1 NC_011989.1 phosphomannomutase 116840 noeK 7388300 noeK Agrobacterium vitis S4 phosphomannomutase YP_002548074.1 115395 D 311402 CDS YP_002548075.1 222147118 7388301 117038..117499 1 NC_011989.1 Acyl-Coa thioester hydrolase 117499 7388301 Avi_0127 Agrobacterium vitis S4 Acyl-Coa thioester hydrolase YP_002548075.1 117038 D 311402 CDS YP_002548076.1 222147119 7388302 117612..118559 1 NC_011989.1 permease 118559 7388302 Avi_0128 Agrobacterium vitis S4 permease YP_002548076.1 117612 D 311402 CDS YP_002548077.1 222147120 7388303 complement(118608..120830) 1 NC_011989.1 hypothetical protein 120830 7388303 Avi_0130 Agrobacterium vitis S4 hypothetical protein YP_002548077.1 118608 R 311402 CDS YP_002548078.1 222147121 7388304 121171..122589 1 NC_011989.1 putative nicotinate phosphoribosyltransferase 122589 7388304 Avi_0131 Agrobacterium vitis S4 putative nicotinate phosphoribosyltransferase YP_002548078.1 121171 D 311402 CDS YP_002548079.1 222147122 7388305 complement(122643..123035) 1 NC_011989.1 hypothetical protein 123035 7388305 Avi_0132 Agrobacterium vitis S4 hypothetical protein YP_002548079.1 122643 R 311402 CDS YP_002548080.1 222147123 7388306 123358..123717 1 NC_011989.1 hypothetical protein 123717 7388306 Avi_0134 Agrobacterium vitis S4 hypothetical protein YP_002548080.1 123358 D 311402 CDS YP_002548081.1 222147124 7388307 123766..124239 1 NC_011989.1 hypothetical protein 124239 7388307 Avi_0136 Agrobacterium vitis S4 hypothetical protein YP_002548081.1 123766 D 311402 CDS YP_002548082.1 222147125 7388308 124437..125687 1 NC_011989.1 aminopeptidase 125687 ampS 7388308 ampS Agrobacterium vitis S4 aminopeptidase YP_002548082.1 124437 D 311402 CDS YP_002548083.1 222147126 7388309 complement(125849..126040) 1 NC_011989.1 hypothetical protein 126040 7388309 Avi_0138 Agrobacterium vitis S4 hypothetical protein YP_002548083.1 125849 R 311402 CDS YP_002548084.1 222147127 7388310 complement(126263..126529) 1 NC_011989.1 hypothetical protein 126529 7388310 Avi_0140 Agrobacterium vitis S4 hypothetical protein YP_002548084.1 126263 R 311402 CDS YP_002548085.1 222147128 7388311 complement(126916..127140) 1 NC_011989.1 cold shock protein 127140 cspA 7388311 cspA Agrobacterium vitis S4 cold shock protein YP_002548085.1 126916 R 311402 CDS YP_002548086.1 222147129 7388312 complement(127450..129081) 1 NC_011989.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 129081 xseA 7388312 xseA Agrobacterium vitis S4 exodeoxyribonuclease VII large subunit YP_002548086.1 127450 R 311402 CDS YP_002548087.1 222147130 7388313 complement(129493..131370) 1 NC_011989.1 hypothetical protein 131370 7388313 Avi_0147 Agrobacterium vitis S4 hypothetical protein YP_002548087.1 129493 R 311402 CDS YP_002548088.1 222147131 7388314 131531..132535 1 NC_011989.1 succinoglycan biosynthesis protein 132535 exoA 7388314 exoA Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002548088.1 131531 D 311402 CDS YP_002548089.1 222147132 7388315 132532..132906 1 NC_011989.1 GtrA family protein 132906 7388315 Avi_0149 Agrobacterium vitis S4 GtrA family protein YP_002548089.1 132532 D 311402 CDS YP_002548090.1 222147133 7388316 complement(132926..133912) 1 NC_011989.1 oxidoreductase 133912 7388316 Avi_0150 Agrobacterium vitis S4 oxidoreductase YP_002548090.1 132926 R 311402 CDS YP_002548091.1 222147134 7388317 134057..135010 1 NC_011989.1 oxidoreductase 135010 7388317 Avi_0151 Agrobacterium vitis S4 oxidoreductase YP_002548091.1 134057 D 311402 CDS YP_002548092.1 222147135 7388318 complement(135057..135947) 1 NC_011989.1 transcriptional regulator 135947 7388318 Avi_0152 Agrobacterium vitis S4 transcriptional regulator YP_002548092.1 135057 R 311402 CDS YP_002548093.1 222147136 7388319 136050..137051 1 NC_011989.1 aldo-keto reductase 137051 7388319 Avi_0153 Agrobacterium vitis S4 aldo-keto reductase YP_002548093.1 136050 D 311402 CDS YP_002548094.1 222147137 7388320 complement(137126..137698) 1 NC_011989.1 hypothetical protein 137698 7388320 Avi_0154 Agrobacterium vitis S4 hypothetical protein YP_002548094.1 137126 R 311402 CDS YP_002548095.1 222147138 7388321 complement(137863..138480) 1 NC_011989.1 hypothetical protein 138480 7388321 Avi_0155 Agrobacterium vitis S4 hypothetical protein YP_002548095.1 137863 R 311402 CDS YP_002548096.1 222147139 7388322 138537..139142 1 NC_011989.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 139142 recR 7388322 recR Agrobacterium vitis S4 recombination protein RecR YP_002548096.1 138537 D 311402 CDS YP_002548097.1 222147140 7388323 139194..140450 1 NC_011989.1 lytic murein transglycosylase 140450 mltB 7388323 mltB Agrobacterium vitis S4 lytic murein transglycosylase YP_002548097.1 139194 D 311402 CDS YP_002548098.1 222147141 7388324 complement(140493..143930) 1 NC_011989.1 Hemolysin-type calcium-binding protein 143930 7388324 Avi_0158 Agrobacterium vitis S4 Hemolysin-type calcium-binding protein YP_002548098.1 140493 R 311402 CDS YP_002548099.1 222147142 7388325 complement(144368..148540) 1 NC_011989.1 Hemolysin-type calcium-binding protein 148540 7388325 Avi_0160 Agrobacterium vitis S4 Hemolysin-type calcium-binding protein YP_002548099.1 144368 R 311402 CDS YP_002548100.1 222147143 7388326 148858..149907 1 NC_011989.1 hypothetical protein 149907 7388326 Avi_0161 Agrobacterium vitis S4 hypothetical protein YP_002548100.1 148858 D 311402 CDS YP_002548101.1 222147144 7388327 complement(149979..152480) 1 NC_011989.1 Hemolysin-type calcium-binding protein 152480 7388327 Avi_0162 Agrobacterium vitis S4 Hemolysin-type calcium-binding protein YP_002548101.1 149979 R 311402 CDS YP_002548102.1 222147145 7388328 complement(152564..154192) 1 NC_011989.1 MFS permease 154192 7388328 Avi_0163 Agrobacterium vitis S4 MFS permease YP_002548102.1 152564 R 311402 CDS YP_002548103.1 222147146 7388329 154495..155109 1 NC_011989.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 155109 7388329 Avi_0164 Agrobacterium vitis S4 hypothetical protein YP_002548103.1 154495 D 311402 CDS YP_002548104.1 222147147 7388330 155168..156784 1 NC_011989.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 156784 nusA 7388330 nusA Agrobacterium vitis S4 transcription elongation factor NusA YP_002548104.1 155168 D 311402 CDS YP_002548105.1 222147148 7388331 156784..157479 1 NC_011989.1 hypothetical protein 157479 7388331 Avi_0168 Agrobacterium vitis S4 hypothetical protein YP_002548105.1 156784 D 311402 CDS YP_002548106.1 222147149 7388332 157583..160363 1 NC_011989.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 160363 infB 7388332 infB Agrobacterium vitis S4 translation initiation factor IF-2 YP_002548106.1 157583 D 311402 CDS YP_002548107.1 222147150 7388333 160528..160941 1 NC_011989.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 160941 rbfA 7388333 rbfA Agrobacterium vitis S4 ribosome-binding factor A YP_002548107.1 160528 D 311402 CDS YP_002548108.1 222147151 7388334 160946..161875 1 NC_011989.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 161875 truB 7388334 truB Agrobacterium vitis S4 tRNA pseudouridine synthase B YP_002548108.1 160946 D 311402 CDS YP_002548109.1 222147152 7388335 162080..162349 1 NC_011989.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 162349 rpsO 7388335 rpsO Agrobacterium vitis S4 30S ribosomal protein S15 YP_002548109.1 162080 D 311402 CDS YP_002548110.1 222147153 7388336 162773..164917 1 NC_011989.1 polynucleotide phosphorylase/polyadenylase 164917 pnpA 7388336 pnpA Agrobacterium vitis S4 polynucleotide phosphorylase/polyadenylase YP_002548110.1 162773 D 311402 CDS YP_002548111.1 222147154 7387984 165091..166107 1 NC_011989.1 ribosomal RNA small subunit methyltransferase 166107 rsmC 7387984 rsmC Agrobacterium vitis S4 ribosomal RNA small subunit methyltransferase YP_002548111.1 165091 D 311402 CDS YP_002548112.1 222147155 7388338 complement(166176..166970) 1 NC_011989.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 166970 fabI 7388338 fabI Agrobacterium vitis S4 enoyl-(acyl carrier protein) reductase YP_002548112.1 166176 R 311402 CDS YP_002548113.1 222147156 7388339 complement(166988..168211) 1 NC_011989.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 168211 fabB 7388339 fabB Agrobacterium vitis S4 3-oxoacyl-ACP synthase YP_002548113.1 166988 R 311402 CDS YP_002548114.1 222147157 7388340 complement(168246..168761) 1 NC_011989.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 168761 fabA 7388340 fabA Agrobacterium vitis S4 3-hydroxydecanoyl-ACP dehydratase YP_002548114.1 168246 R 311402 CDS YP_002548115.1 222147158 7386829 169069..169485 1 NC_011989.1 transcriptional regulator Fur family 169485 irr 7386829 irr Agrobacterium vitis S4 transcriptional regulator Fur family YP_002548115.1 169069 D 311402 CDS YP_002548116.1 222147159 7387511 complement(169550..170185) 1 NC_011989.1 hypothetical protein 170185 7387511 Avi_0184 Agrobacterium vitis S4 hypothetical protein YP_002548116.1 169550 R 311402 CDS YP_002548117.1 222147160 7387512 complement(170468..170989) 1 NC_011989.1 hypothetical protein 170989 7387512 Avi_0189 Agrobacterium vitis S4 hypothetical protein YP_002548117.1 170468 R 311402 CDS YP_002548118.1 222147161 7387513 complement(171038..172417) 1 NC_011989.1 sugar ABC transporter permease 172417 7387513 Avi_0190 Agrobacterium vitis S4 sugar ABC transporter permease YP_002548118.1 171038 R 311402 CDS YP_002548119.1 222147162 7387187 complement(173084..173470) 1 NC_011989.1 hypothetical protein 173470 7387187 Avi_0191 Agrobacterium vitis S4 hypothetical protein YP_002548119.1 173084 R 311402 CDS YP_002548120.1 222147163 7387515 173741..174394 1 NC_011989.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 174394 cmk 7387515 cmk Agrobacterium vitis S4 cytidylate kinase YP_002548120.1 173741 D 311402 CDS YP_002548121.1 222147164 7387516 174545..176266 1 NC_011989.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 176266 rpsA 7387516 rpsA Agrobacterium vitis S4 30S ribosomal protein S1 YP_002548121.1 174545 D 311402 CDS YP_002548122.1 222147165 7387517 176428..177411 1 NC_011989.1 hypothetical protein 177411 7387517 Avi_0196 Agrobacterium vitis S4 hypothetical protein YP_002548122.1 176428 D 311402 CDS YP_002548123.1 222147166 7387518 complement(177476..177991) 1 NC_011989.1 hypothetical protein 177991 7387518 Avi_0197 Agrobacterium vitis S4 hypothetical protein YP_002548123.1 177476 R 311402 CDS YP_002548124.1 222147167 7387519 complement(178265..179074) 1 NC_011989.1 hypothetical protein 179074 7387519 Avi_0199 Agrobacterium vitis S4 hypothetical protein YP_002548124.1 178265 R 311402 CDS YP_002548125.1 222147168 7387520 179359..179814 1 NC_011989.1 translation initiation factor IF-3 179814 infC 7387520 infC Agrobacterium vitis S4 translation initiation factor IF-3 YP_002548125.1 179359 D 311402 CDS YP_002548126.1 222147169 7387521 181269..181937 1 NC_011989.1 two component response regulator 181937 7387521 Avi_0202 Agrobacterium vitis S4 two component response regulator YP_002548126.1 181269 D 311402 CDS YP_002548127.1 222147170 7387522 181931..183286 1 NC_011989.1 two component sensor kinase 183286 7387522 Avi_0203 Agrobacterium vitis S4 two component sensor kinase YP_002548127.1 181931 D 311402 CDS YP_002548128.1 222147171 7387523 183514..183717 1 NC_011989.1 50S ribosomal protein L35 183717 rpmI 7387523 rpmI Agrobacterium vitis S4 50S ribosomal protein L35 YP_002548128.1 183514 D 311402 CDS YP_002548129.1 222147172 7387524 183757..184161 1 NC_011989.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 184161 rplT 7387524 rplT Agrobacterium vitis S4 50S ribosomal protein L20 YP_002548129.1 183757 D 311402 CDS YP_002548130.1 222147173 7387525 184324..185409 1 NC_011989.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 185409 pheS 7387525 pheS Agrobacterium vitis S4 phenylalanyl-tRNA synthetase subunit alpha YP_002548130.1 184324 D 311402 CDS YP_002548131.1 222147174 7387526 185825..188248 1 NC_011989.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 188248 pheT 7387526 pheT Agrobacterium vitis S4 phenylalanyl-tRNA synthetase subunit beta YP_002548131.1 185825 D 311402 CDS YP_002548132.1 222147175 7387527 complement(188499..188942) 1 NC_011989.1 hypothetical protein 188942 7387527 Avi_0210 Agrobacterium vitis S4 hypothetical protein YP_002548132.1 188499 R 311402 CDS YP_002548133.1 222147176 7387994 complement(189489..189866) 1 NC_011989.1 hypothetical protein 189866 7387994 Avi_0211 Agrobacterium vitis S4 hypothetical protein YP_002548133.1 189489 R 311402 CDS YP_002548134.1 222147177 7387529 complement(190237..191217) 1 NC_011989.1 component of type IV pilus 191217 ctpI 7387529 ctpI Agrobacterium vitis S4 component of type IV pilus YP_002548134.1 190237 R 311402 CDS YP_002548135.1 222147178 7387530 complement(191228..192232) 1 NC_011989.1 component of type IV pilus 192232 ctpH 7387530 ctpH Agrobacterium vitis S4 component of type IV pilus YP_002548135.1 191228 R 311402 CDS YP_002548136.1 222147179 7387531 complement(192236..193714) 1 NC_011989.1 component of type IV pilus 193714 ctpG 7387531 ctpG Agrobacterium vitis S4 component of type IV pilus YP_002548136.1 192236 R 311402 CDS YP_002548137.1 222147180 7387532 complement(193764..195050) 1 NC_011989.1 component of type IV pilus 195050 ctpF 7387532 ctpF Agrobacterium vitis S4 component of type IV pilus YP_002548137.1 193764 R 311402 CDS YP_002548138.1 222147181 7387533 complement(195077..195667) 1 NC_011989.1 component of type IV pilus 195667 ctpE 7387533 ctpE Agrobacterium vitis S4 component of type IV pilus YP_002548138.1 195077 R 311402 CDS YP_002548139.1 222147182 7387534 complement(195781..197358) 1 NC_011989.1 component of type IV pilus 197358 ctpD 7387534 ctpD Agrobacterium vitis S4 component of type IV pilus YP_002548139.1 195781 R 311402 CDS YP_002548140.1 222147183 7387535 complement(197355..198164) 1 NC_011989.1 component of type IV pilus 198164 ctpC 7387535 ctpC Agrobacterium vitis S4 component of type IV pilus YP_002548140.1 197355 R 311402 CDS YP_002548141.1 222147184 7387536 complement(198275..198793) 1 NC_011989.1 component of type IV pilus prepilin peptidase 198793 ctpB 7387536 ctpB Agrobacterium vitis S4 component of type IV pilus prepilin peptidase YP_002548141.1 198275 R 311402 CDS YP_002548142.1 222147185 7387537 complement(198997..199182) 1 NC_011989.1 component of type 4 pilus pilin subunit protein 199182 ctpA 7387537 ctpA Agrobacterium vitis S4 component of type 4 pilus pilin subunit protein YP_002548142.1 198997 R 311402 CDS YP_002548143.1 222147186 7387538 complement(199370..199555) 1 NC_011989.1 component of type 4 pilus pilin subunit protein 199555 ctpA 7387538 ctpA Agrobacterium vitis S4 component of type 4 pilus pilin subunit protein YP_002548143.1 199370 R 311402 CDS YP_002548144.1 222147187 7387539 199899..200378 1 NC_011989.1 pilus subunit transmembrane protein 200378 pilQ 7387539 pilQ Agrobacterium vitis S4 pilus subunit transmembrane protein YP_002548144.1 199899 D 311402 CDS YP_002548145.1 222147188 7387540 200605..201228 1 NC_011989.1 hypothetical protein 201228 7387540 Avi_0226 Agrobacterium vitis S4 hypothetical protein YP_002548145.1 200605 D 311402 CDS YP_002548146.1 222147189 7387541 201225..201809 1 NC_011989.1 hypothetical protein 201809 7387541 Avi_0228 Agrobacterium vitis S4 hypothetical protein YP_002548146.1 201225 D 311402 CDS YP_002548147.1 222147190 7387542 201958..203178 1 NC_011989.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 203178 deoB 7387542 deoB Agrobacterium vitis S4 phosphopentomutase YP_002548147.1 201958 D 311402 CDS YP_002548148.1 222147191 7387543 203175..204173 1 NC_011989.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 204173 add 7387543 add Agrobacterium vitis S4 adenosine deaminase YP_002548148.1 203175 D 311402 CDS YP_002548149.1 222147192 7387544 204258..204887 1 NC_011989.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 204887 upp 7387544 upp Agrobacterium vitis S4 uracil phosphoribosyltransferase YP_002548149.1 204258 D 311402 CDS YP_002548150.1 222147193 7387545 204983..205504 1 NC_011989.1 hypothetical protein 205504 7387545 Avi_0232 Agrobacterium vitis S4 hypothetical protein YP_002548150.1 204983 D 311402 CDS YP_002548151.1 222147194 7387546 205644..206273 1 NC_011989.1 RhtB family transporter 206273 rhtB 7387546 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002548151.1 205644 D 311402 CDS YP_002548152.1 222147195 7387547 complement(206429..207064) 1 NC_011989.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 207064 7387547 Avi_0235 Agrobacterium vitis S4 phosphoglyceromutase YP_002548152.1 206429 R 311402 CDS YP_002548153.1 222147196 7387548 complement(207100..207912) 1 NC_011989.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 207912 dapB 7387548 dapB Agrobacterium vitis S4 dihydrodipicolinate reductase YP_002548153.1 207100 R 311402 CDS YP_002548154.1 222147197 7387549 complement(207998..209788) 1 NC_011989.1 ABC transporter ATPase 209788 7387549 Avi_0238 Agrobacterium vitis S4 ABC transporter ATPase YP_002548154.1 207998 R 311402 CDS YP_002548155.1 222147198 7387550 complement(209893..210915) 1 NC_011989.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 210915 glk 7387550 glk Agrobacterium vitis S4 glucokinase YP_002548155.1 209893 R 311402 CDS YP_002548156.1 222147199 7387551 complement(210963..211343) 1 NC_011989.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 211343 mgsA 7387551 mgsA Agrobacterium vitis S4 methylglyoxal synthase YP_002548156.1 210963 R 311402 CDS YP_002548157.1 222147200 7387552 complement(211429..212439) 1 NC_011989.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 212439 mepA 7387552 mepA Agrobacterium vitis S4 penicillin-insensitive murein endopeptidase YP_002548157.1 211429 R 311402 CDS YP_002548158.1 222147201 7387553 212727..214622 1 NC_011989.1 ABC transporter substrate binding protein (peptide) 214622 7387553 Avi_0244 Agrobacterium vitis S4 ABC transporter substrate binding protein (peptide) YP_002548158.1 212727 D 311402 CDS YP_002548159.1 222147202 7387554 214795..215886 1 NC_011989.1 peptide ABC transporter permease 215886 7387554 Avi_0245 Agrobacterium vitis S4 peptide ABC transporter permease YP_002548159.1 214795 D 311402 CDS YP_002548160.1 222147203 7387555 215886..217022 1 NC_011989.1 peptide ABC transporter permease 217022 7387555 Avi_0246 Agrobacterium vitis S4 peptide ABC transporter permease YP_002548160.1 215886 D 311402 CDS YP_002548161.1 222147204 7387556 217019..218647 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (peptide) 218647 7387556 Avi_0247 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (peptide) YP_002548161.1 217019 D 311402 CDS YP_002548162.1 222147205 7387557 218676..219638 1 NC_011989.1 2-hydroxyacid dehydrogenase 219638 7387557 Avi_0248 Agrobacterium vitis S4 2-hydroxyacid dehydrogenase YP_002548162.1 218676 D 311402 CDS YP_002548163.1 222147206 7387558 219721..220002 1 NC_011989.1 hypothetical protein 220002 7387558 Avi_0249 Agrobacterium vitis S4 hypothetical protein YP_002548163.1 219721 D 311402 CDS YP_002548164.1 222147207 7387559 220183..221487 1 NC_011989.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 221487 pncB 7387559 pncB Agrobacterium vitis S4 nicotinate phosphoribosyltransferase YP_002548164.1 220183 D 311402 CDS YP_002548165.1 222147208 7387560 complement(221504..221995) 1 NC_011989.1 hypothetical protein 221995 7387560 Avi_0252 Agrobacterium vitis S4 hypothetical protein YP_002548165.1 221504 R 311402 CDS YP_002548166.1 222147209 7387186 222659..222979 1 NC_011989.1 hypothetical protein 222979 7387186 Avi_0253 Agrobacterium vitis S4 hypothetical protein YP_002548166.1 222659 D 311402 CDS YP_002548167.1 222147210 7387562 223555..224547 1 NC_011989.1 membrane lipoprotein 224547 7387562 Avi_0256 Agrobacterium vitis S4 membrane lipoprotein YP_002548167.1 223555 D 311402 CDS YP_002548168.1 222147211 7387563 224789..226222 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide) 226222 7387563 Avi_0258 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide) YP_002548168.1 224789 D 311402 CDS YP_002548169.1 222147212 7387564 226230..227360 1 NC_011989.1 sugar ABC transporter permease 227360 7387564 Avi_0259 Agrobacterium vitis S4 sugar ABC transporter permease YP_002548169.1 226230 D 311402 CDS YP_002548170.1 222147213 7387565 227373..228344 1 NC_011989.1 sugar ABC transporter permease 228344 7387565 Avi_0260 Agrobacterium vitis S4 sugar ABC transporter permease YP_002548170.1 227373 D 311402 CDS YP_002548171.1 222147214 7387566 228346..228738 1 NC_011989.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 228738 cdd 7387566 cdd Agrobacterium vitis S4 cytidine deaminase YP_002548171.1 228346 D 311402 CDS YP_002548172.1 222147215 7387567 228735..229544 1 NC_011989.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 229544 7387567 Avi_0263 Agrobacterium vitis S4 purine nucleoside phosphorylase YP_002548172.1 228735 D 311402 CDS YP_002548173.1 222147216 7387568 229522..230310 1 NC_011989.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 230310 deoC 7387568 deoC Agrobacterium vitis S4 deoxyribose-phosphate aldolase YP_002548173.1 229522 D 311402 CDS YP_002548174.1 222147217 7387569 230312..231631 1 NC_011989.1 thymidine phosphorylase 231631 deoA 7387569 deoA Agrobacterium vitis S4 thymidine phosphorylase YP_002548174.1 230312 D 311402 CDS YP_002548175.1 222147218 7387570 complement(231615..232352) 1 NC_011989.1 phosphonates metabolism transcriptional regulator PhnF 232352 phnF 7387570 phnF Agrobacterium vitis S4 phosphonates metabolism transcriptional regulator PhnF YP_002548175.1 231615 R 311402 CDS YP_002548176.1 222147219 7387571 232452..232919 1 NC_011989.1 hypothetical protein 232919 phnG 7387571 phnG Agrobacterium vitis S4 hypothetical protein YP_002548176.1 232452 D 311402 CDS YP_002548177.1 222147220 7387572 232979..233524 1 NC_011989.1 hypothetical protein 233524 phnH 7387572 phnH Agrobacterium vitis S4 hypothetical protein YP_002548177.1 232979 D 311402 CDS YP_002548178.1 222147221 7387573 233525..234631 1 NC_011989.1 hypothetical protein 234631 phnI 7387573 phnI Agrobacterium vitis S4 hypothetical protein YP_002548178.1 233525 D 311402 CDS YP_002548179.1 222147222 7387574 234774..235682 1 NC_011989.1 hypothetical protein 235682 phnJ 7387574 phnJ Agrobacterium vitis S4 hypothetical protein YP_002548179.1 234774 D 311402 CDS YP_002548180.1 222147223 7387575 235679..236455 1 NC_011989.1 phosphonate C-P lyase system protein PhnK 236455 phnK 7387575 phnK Agrobacterium vitis S4 phosphonate C-P lyase system protein PhnK YP_002548180.1 235679 D 311402 CDS YP_002548181.1 222147224 7387576 236468..237196 1 NC_011989.1 phosphonate C-P lyase system protein PhnL 237196 phnL 7387576 phnL Agrobacterium vitis S4 phosphonate C-P lyase system protein PhnL YP_002548181.1 236468 D 311402 CDS YP_002548182.1 222147225 7387577 237272..237895 1 NC_011989.1 acetyltransferase 237895 7387577 Avi_0277 Agrobacterium vitis S4 acetyltransferase YP_002548182.1 237272 D 311402 CDS YP_002548183.1 222147226 7387578 238012..238851 1 NC_011989.1 phosphonate ABC transporter ATP-binding protein 238851 phnC 7387578 phnC Agrobacterium vitis S4 phosphonate ABC transporter ATP-binding protein YP_002548183.1 238012 D 311402 CDS YP_002548184.1 222147227 7387579 239008..239916 1 NC_011989.1 ABC transporter substrate binding protein (phosphonate) 239916 phnD 7387579 phnD Agrobacterium vitis S4 ABC transporter substrate binding protein (phosphonate) YP_002548184.1 239008 D 311402 CDS YP_002548185.1 222147228 7387580 239993..240955 1 NC_011989.1 phosphonate ABC transporter permease 240955 phnE 7387580 phnE Agrobacterium vitis S4 phosphonate ABC transporter permease YP_002548185.1 239993 D 311402 CDS YP_002548186.1 222147229 7387581 240965..242464 1 NC_011989.1 phosphonate ABC transporter permease 242464 phnE 7387581 phnE Agrobacterium vitis S4 phosphonate ABC transporter permease YP_002548186.1 240965 D 311402 CDS YP_002548187.1 222147230 7387582 242577..243278 1 NC_011989.1 hypothetical protein 243278 7387582 Avi_0286 Agrobacterium vitis S4 hypothetical protein YP_002548187.1 242577 D 311402 CDS YP_002548188.1 222147231 7387583 243278..244429 1 NC_011989.1 phosphonate metabolism protein PhnM 244429 phnM 7387583 phnM Agrobacterium vitis S4 phosphonate metabolism protein PhnM YP_002548188.1 243278 D 311402 CDS YP_002548189.1 222147232 7387584 244489..245040 1 NC_011989.1 guanylate kinase 245040 gmk 7387584 gmk Agrobacterium vitis S4 guanylate kinase YP_002548189.1 244489 D 311402 CDS YP_002548190.1 222147233 7387585 245245..245874 1 NC_011989.1 RhtB family transporter 245874 rhtB 7387585 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002548190.1 245245 D 311402 CDS YP_002548191.1 222147234 7387586 complement(245880..246668) 1 NC_011989.1 hypothetical protein 246668 7387586 Avi_0290 Agrobacterium vitis S4 hypothetical protein YP_002548191.1 245880 R 311402 CDS YP_002548192.1 222147235 7387587 247054..248442 1 NC_011989.1 leucine aminopeptidase 248442 7387587 Avi_0292 Agrobacterium vitis S4 leucine aminopeptidase YP_002548192.1 247054 D 311402 CDS YP_002548193.1 222147236 7387588 249043..249738 1 NC_011989.1 hypothetical protein 249738 7387588 Avi_0293 Agrobacterium vitis S4 hypothetical protein YP_002548193.1 249043 D 311402 CDS YP_002548194.1 222147237 7387589 250049..251299 1 NC_011989.1 cytochrome b561 251299 7387589 Avi_0295 Agrobacterium vitis S4 cytochrome b561 YP_002548194.1 250049 D 311402 CDS YP_002548195.1 222147238 7387590 251390..251740 1 NC_011989.1 hypothetical protein 251740 7387590 Avi_0296 Agrobacterium vitis S4 hypothetical protein YP_002548195.1 251390 D 311402 CDS YP_002548196.1 222147239 7387591 251743..252603 1 NC_011989.1 hypothetical protein 252603 7387591 Avi_0297 Agrobacterium vitis S4 hypothetical protein YP_002548196.1 251743 D 311402 CDS YP_002548197.1 222147240 7387592 complement(252729..255707) 1 NC_011989.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 255707 polA 7387592 polA Agrobacterium vitis S4 DNA polymerase I YP_002548197.1 252729 R 311402 CDS YP_002548198.1 222147241 7388671 256094..256543 1 NC_011989.1 transcriptional regulator MarR family 256543 7388671 Avi_0300 Agrobacterium vitis S4 transcriptional regulator MarR family YP_002548198.1 256094 D 311402 CDS YP_002548199.1 222147242 7387758 256616..258004 1 NC_011989.1 hypothetical protein 258004 dapE 7387758 dapE Agrobacterium vitis S4 hypothetical protein YP_002548199.1 256616 D 311402 CDS YP_002548200.1 222147243 7387759 258465..258923 1 NC_011989.1 hypothetical protein 258923 7387759 Avi_0303 Agrobacterium vitis S4 hypothetical protein YP_002548200.1 258465 D 311402 CDS YP_002548201.1 222147244 7387760 complement(259052..259375) 1 NC_011989.1 hypothetical protein 259375 7387760 Avi_0304 Agrobacterium vitis S4 hypothetical protein YP_002548201.1 259052 R 311402 CDS YP_002548202.1 222147245 7387761 259590..262091 1 NC_011989.1 penicillin-binding protein 262091 pbpC 7387761 pbpC Agrobacterium vitis S4 penicillin-binding protein YP_002548202.1 259590 D 311402 CDS YP_002548203.1 222147246 7387762 262413..264329 1 NC_011989.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 264329 dnaK 7387762 dnaK Agrobacterium vitis S4 molecular chaperone DnaK YP_002548203.1 262413 D 311402 CDS YP_002548204.1 222147247 7387763 264329..264790 1 NC_011989.1 hypothetical protein 264790 7387763 Avi_0307 Agrobacterium vitis S4 hypothetical protein YP_002548204.1 264329 D 311402 CDS YP_002548205.1 222147248 7387764 264795..265937 1 NC_011989.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 265937 dnaJ 7387764 dnaJ Agrobacterium vitis S4 chaperone protein DnaJ YP_002548205.1 264795 D 311402 CDS YP_002548206.1 222147249 7387765 complement(265979..266203) 1 NC_011989.1 hypothetical protein 266203 7387765 Avi_0309 Agrobacterium vitis S4 hypothetical protein YP_002548206.1 265979 R 311402 CDS YP_002548207.1 222147250 7387766 266366..267490 1 NC_011989.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 267490 recF 7387766 recF Agrobacterium vitis S4 recombination protein F YP_002548207.1 266366 D 311402 CDS YP_002548208.1 222147251 7387767 267526..268296 1 NC_011989.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 268296 moeB 7387767 moeB Agrobacterium vitis S4 molybdopterin biosynthesis protein MoeB YP_002548208.1 267526 D 311402 CDS YP_002548209.1 222147252 7387768 268339..268815 1 NC_011989.1 hypothetical protein 268815 7387768 Avi_0313 Agrobacterium vitis S4 hypothetical protein YP_002548209.1 268339 D 311402 CDS YP_002548210.1 222147253 7387769 complement(268894..269898) 1 NC_011989.1 D-isomer specific 2-hydroxyacid dehydrogenases family protein 269898 7387769 Avi_0314 Agrobacterium vitis S4 D-isomer specific 2-hydroxyacid dehydrogenases family protein YP_002548210.1 268894 R 311402 CDS YP_002548211.1 222147254 7387770 270187..270726 1 NC_011989.1 hypothetical protein 270726 7387770 Avi_0315 Agrobacterium vitis S4 hypothetical protein YP_002548211.1 270187 D 311402 CDS YP_002548212.1 222147255 7387771 complement(270770..271762) 1 NC_011989.1 pfkB family carbohydrate kinase 271762 7387771 Avi_0316 Agrobacterium vitis S4 pfkB family carbohydrate kinase YP_002548212.1 270770 R 311402 CDS YP_002548213.1 222147256 7387772 complement(271874..273319) 1 NC_011989.1 GGDEF family protein 273319 7387772 Avi_0317 Agrobacterium vitis S4 GGDEF family protein YP_002548213.1 271874 R 311402 CDS YP_002548214.1 222147257 7387773 complement(273751..276177) 1 NC_011989.1 hypothetical protein 276177 7387773 Avi_0319 Agrobacterium vitis S4 hypothetical protein YP_002548214.1 273751 R 311402 CDS YP_002548215.1 222147258 7387774 complement(276197..277768) 1 NC_011989.1 NADH Dehydrogenase Protein 277768 7387774 Avi_0320 Agrobacterium vitis S4 NADH Dehydrogenase Protein YP_002548215.1 276197 R 311402 CDS YP_002548216.1 222147259 7387775 277878..278762 1 NC_011989.1 LysR family transcriptional regulator 278762 oxyR 7387775 oxyR Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548216.1 277878 D 311402 CDS YP_002548217.1 222147260 7387776 complement(278802..279959) 1 NC_011989.1 hypothetical protein 279959 7387776 Avi_0323 Agrobacterium vitis S4 hypothetical protein YP_002548217.1 278802 R 311402 CDS YP_002548218.1 222147261 7387777 280369..281022 1 NC_011989.1 Transcriptional regulator protein 281022 7387777 Avi_0326 Agrobacterium vitis S4 Transcriptional regulator protein YP_002548218.1 280369 D 311402 CDS YP_002548219.1 222147262 7387778 complement(281180..282742) 1 NC_011989.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 282742 guaA 7387778 guaA Agrobacterium vitis S4 GMP synthase YP_002548219.1 281180 R 311402 CDS YP_002548220.1 222147263 7387779 complement(282827..283465) 1 NC_011989.1 Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 283465 pfs 7387779 pfs Agrobacterium vitis S4 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_002548220.1 282827 R 311402 CDS YP_002548221.1 222147264 7387780 complement(283462..283899) 1 NC_011989.1 hypothetical protein 283899 7387780 Avi_0329 Agrobacterium vitis S4 hypothetical protein YP_002548221.1 283462 R 311402 CDS YP_002548222.1 222147265 7387781 complement(284023..284487) 1 NC_011989.1 tryptophan-rich sensory protein 284487 tspO 7387781 tspO Agrobacterium vitis S4 tryptophan-rich sensory protein YP_002548222.1 284023 R 311402 CDS YP_002548223.1 222147266 7387782 complement(284536..285609) 1 NC_011989.1 hypothetical protein 285609 7387782 Avi_0332 Agrobacterium vitis S4 hypothetical protein YP_002548223.1 284536 R 311402 CDS YP_002548224.1 222147267 7387783 complement(285615..286739) 1 NC_011989.1 hypothetical protein 286739 7387783 Avi_0333 Agrobacterium vitis S4 hypothetical protein YP_002548224.1 285615 R 311402 CDS YP_002548225.1 222147268 7387784 complement(286739..288325) 1 NC_011989.1 hypothetical protein 288325 7387784 Avi_0334 Agrobacterium vitis S4 hypothetical protein YP_002548225.1 286739 R 311402 CDS YP_002548226.1 222147269 7387785 complement(288343..289620) 1 NC_011989.1 hypothetical protein 289620 7387785 Avi_0335 Agrobacterium vitis S4 hypothetical protein YP_002548226.1 288343 R 311402 CDS YP_002548227.1 222147270 7387786 complement(289738..291024) 1 NC_011989.1 Sun protein 291024 sun 7387786 sun Agrobacterium vitis S4 Sun protein YP_002548227.1 289738 R 311402 CDS YP_002548228.1 222147271 7387787 complement(291334..291768) 1 NC_011989.1 rare lipoprotein A 291768 7387787 Avi_0337 Agrobacterium vitis S4 rare lipoprotein A YP_002548228.1 291334 R 311402 CDS YP_002548229.1 222147272 7387788 complement(292043..292939) 1 NC_011989.1 hypothetical protein 292939 7387788 Avi_0339 Agrobacterium vitis S4 hypothetical protein YP_002548229.1 292043 R 311402 CDS YP_002548230.1 222147273 7387789 complement(292912..294084) 1 NC_011989.1 iron-sulfur cluster binding protein 294084 7387789 Avi_0340 Agrobacterium vitis S4 iron-sulfur cluster binding protein YP_002548230.1 292912 R 311402 CDS YP_002548231.1 222147274 7387790 complement(294096..294788) 1 NC_011989.1 glutathione S-transferase 294788 7387790 Avi_0341 Agrobacterium vitis S4 glutathione S-transferase YP_002548231.1 294096 R 311402 CDS YP_002548232.1 222147275 7387791 294962..295768 1 NC_011989.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 295768 bacA 7387791 bacA Agrobacterium vitis S4 UDP pyrophosphate phosphatase YP_002548232.1 294962 D 311402 CDS YP_002548233.1 222147276 7387792 complement(296504..297481) 1 NC_011989.1 NADH-ubiquinone oxidoreductase 297481 7387792 Avi_0343 Agrobacterium vitis S4 NADH-ubiquinone oxidoreductase YP_002548233.1 296504 R 311402 CDS YP_002548234.1 222147277 7387793 complement(297616..297906) 1 NC_011989.1 hypothetical protein 297906 7387793 Avi_0345 Agrobacterium vitis S4 hypothetical protein YP_002548234.1 297616 R 311402 CDS YP_002548235.1 222147278 7387794 298159..299310 1 NC_011989.1 hypothetical protein 299310 7387794 Avi_0346 Agrobacterium vitis S4 hypothetical protein YP_002548235.1 298159 D 311402 CDS YP_002548236.1 222147279 7387795 complement(299330..300025) 1 NC_011989.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 300025 pyrF 7387795 pyrF Agrobacterium vitis S4 orotidine 5'-phosphate decarboxylase YP_002548236.1 299330 R 311402 CDS YP_002548237.1 222147280 7387796 complement(300025..300612) 1 NC_011989.1 hypothetical protein 300612 7387796 Avi_0348 Agrobacterium vitis S4 hypothetical protein YP_002548237.1 300025 R 311402 CDS YP_002548238.1 222147281 7387797 complement(300626..301219) 1 NC_011989.1 methyltransferase 301219 7387797 Avi_0349 Agrobacterium vitis S4 methyltransferase YP_002548238.1 300626 R 311402 CDS YP_002548239.1 222147282 7387798 complement(301462..302700) 1 NC_011989.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 302700 dnaN 7387798 dnaN Agrobacterium vitis S4 DNA polymerase III subunit beta YP_002548239.1 301462 R 311402 CDS YP_002548240.1 222147283 7387799 302880..303800 1 NC_011989.1 tetrapyrrole methylase 303800 7387799 Avi_0352 Agrobacterium vitis S4 tetrapyrrole methylase YP_002548240.1 302880 D 311402 CDS YP_002548241.1 222147284 7387800 303797..304183 1 NC_011989.1 hypothetical protein 304183 7387800 Avi_0353 Agrobacterium vitis S4 hypothetical protein YP_002548241.1 303797 D 311402 CDS YP_002548242.1 222147285 7387801 304331..305629 1 NC_011989.1 ABC transporter substrate binding protein (sn-glycerol 3-phosphate) 305629 ugpA 7387801 ugpA Agrobacterium vitis S4 ABC transporter substrate binding protein (sn-glycerol 3-phosphate) YP_002548242.1 304331 D 311402 CDS YP_002548243.1 222147286 7387802 305705..306586 1 NC_011989.1 sn-glycerol-3-phosphate ABC transporter permease 306586 ugpA 7387802 ugpA Agrobacterium vitis S4 sn-glycerol-3-phosphate ABC transporter permease YP_002548243.1 305705 D 311402 CDS YP_002548244.1 222147287 7387803 306597..307439 1 NC_011989.1 sn-glycerol-3-phosphate ABC transporter permease 307439 ugpE 7387803 ugpE Agrobacterium vitis S4 sn-glycerol-3-phosphate ABC transporter permease YP_002548244.1 306597 D 311402 CDS YP_002548245.1 222147288 7387804 307451..308557 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (sn-Glycerol-3-phosphate) 308557 ugpC 7387804 ugpC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sn-Glycerol-3-phosphate) YP_002548245.1 307451 D 311402 CDS YP_002548246.1 222147289 7387805 308709..309200 1 NC_011989.1 hypothetical protein 309200 7387805 Avi_0360 Agrobacterium vitis S4 hypothetical protein YP_002548246.1 308709 D 311402 CDS YP_002548247.1 222147290 7387806 309287..310234 1 NC_011989.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 310234 gshB 7387806 gshB Agrobacterium vitis S4 glutathione synthetase YP_002548247.1 309287 D 311402 CDS YP_002548248.1 222147291 7387807 310683..312215 1 NC_011989.1 hypothetical protein 312215 7387807 Avi_0363 Agrobacterium vitis S4 hypothetical protein YP_002548248.1 310683 D 311402 CDS YP_002548249.1 222147292 7387808 complement(312499..313467) 1 NC_011989.1 cysteine synthase 313467 cysK 7387808 cysK Agrobacterium vitis S4 cysteine synthase YP_002548249.1 312499 R 311402 CDS YP_002548250.1 222147293 7387809 complement(313603..314220) 1 NC_011989.1 RhtB family transporter 314220 rhtB 7387809 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002548250.1 313603 R 311402 CDS YP_002548251.1 222147294 7387810 314351..314983 1 NC_011989.1 RhtB family transporter 314983 rhtB 7387810 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002548251.1 314351 D 311402 CDS YP_002548252.1 222147295 7387811 complement(314986..315876) 1 NC_011989.1 acetyltransferase 315876 7387811 Avi_0367 Agrobacterium vitis S4 acetyltransferase YP_002548252.1 314986 R 311402 CDS YP_002548253.1 222147296 7387812 complement(315885..316349) 1 NC_011989.1 deoxyuridine 5primetriphosphate nucleotidohydrolase 316349 dut 7387812 dut Agrobacterium vitis S4 deoxyuridine 5primetriphosphate nucleotidohydrolase YP_002548253.1 315885 R 311402 CDS YP_002548254.1 222147297 7387813 316434..318017 1 NC_011989.1 peptide chain release factor 3 318017 prfC 7387813 prfC Agrobacterium vitis S4 peptide chain release factor 3 YP_002548254.1 316434 D 311402 CDS YP_002548255.1 222147298 7387814 complement(318083..319486) 1 NC_011989.1 OtsA trehalose-6-phosphate synthase 319486 7387814 Avi_0370 Agrobacterium vitis S4 OtsA trehalose-6-phosphate synthase YP_002548255.1 318083 R 311402 CDS YP_002548256.1 222147299 7387815 complement(319516..320316) 1 NC_011989.1 Trehalose-6-phosphatase 320316 7387815 Avi_0371 Agrobacterium vitis S4 Trehalose-6-phosphatase YP_002548256.1 319516 R 311402 CDS YP_002548257.1 222147300 7387816 320529..321386 1 NC_011989.1 phosphomethylpyrimidine kinase 321386 thiD 7387816 thiD Agrobacterium vitis S4 phosphomethylpyrimidine kinase YP_002548257.1 320529 D 311402 CDS YP_002548258.1 222147301 7387817 complement(321398..321802) 1 NC_011989.1 hypothetical protein 321802 7387817 Avi_0373 Agrobacterium vitis S4 hypothetical protein YP_002548258.1 321398 R 311402 CDS YP_002548259.1 222147302 7387818 complement(321955..322530) 1 NC_011989.1 tyrosine/serine protein phosphatase 322530 7387818 Avi_0375 Agrobacterium vitis S4 tyrosine/serine protein phosphatase YP_002548259.1 321955 R 311402 CDS YP_002548260.1 222147303 7387819 complement(322649..323560) 1 NC_011989.1 pirin protein 323560 7387819 Avi_0377 Agrobacterium vitis S4 pirin protein YP_002548260.1 322649 R 311402 CDS YP_002548261.1 222147304 7387820 323837..324652 1 NC_011989.1 glutamine amidotransferase 324652 7387820 Avi_0378 Agrobacterium vitis S4 glutamine amidotransferase YP_002548261.1 323837 D 311402 CDS YP_002548262.1 222147305 7387821 complement(324790..325719) 1 NC_011989.1 LysR family transcriptional regulator 325719 7387821 Avi_0380 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548262.1 324790 R 311402 CDS YP_002548263.1 222147306 7387822 325810..326409 1 NC_011989.1 chromate transport protein 326409 chrA 7387822 chrA Agrobacterium vitis S4 chromate transport protein YP_002548263.1 325810 D 311402 CDS YP_002548264.1 222147307 7387823 326406..326927 1 NC_011989.1 chromate transport protein 326927 chrA 7387823 chrA Agrobacterium vitis S4 chromate transport protein YP_002548264.1 326406 D 311402 CDS YP_002548265.1 222147308 7387824 complement(326924..328141) 1 NC_011989.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 328141 coaBC 7387824 coaBC Agrobacterium vitis S4 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_002548265.1 326924 R 311402 CDS YP_002548266.1 222147309 7387825 complement(328236..329270) 1 NC_011989.1 two component sensor kinase 329270 fsrR 7387825 fsrR Agrobacterium vitis S4 two component sensor kinase YP_002548266.1 328236 R 311402 CDS YP_002548267.1 222147310 7387826 complement(329286..329723) 1 NC_011989.1 two component response regulator 329723 7387826 Avi_0385 Agrobacterium vitis S4 two component response regulator YP_002548267.1 329286 R 311402 CDS YP_002548268.1 222147311 7387827 complement(329726..331213) 1 NC_011989.1 two component sensor kinase 331213 7387827 Avi_0386 Agrobacterium vitis S4 two component sensor kinase YP_002548268.1 329726 R 311402 CDS YP_002548269.1 222147312 7387828 complement(331220..332803) 1 NC_011989.1 2-polyprenylphenol 6-hydroxylase 332803 ubiB 7387828 ubiB Agrobacterium vitis S4 2-polyprenylphenol 6-hydroxylase YP_002548269.1 331220 R 311402 CDS YP_002548270.1 222147313 7387829 complement(332845..333621) 1 NC_011989.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 333621 ubiE 7387829 ubiE Agrobacterium vitis S4 ubiquinone/menaquinone biosynthesis methyltransferase YP_002548270.1 332845 R 311402 CDS YP_002548271.1 222147314 7387830 333812..334705 1 NC_011989.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 334705 mutM 7387830 mutM Agrobacterium vitis S4 formamidopyrimidine-DNA glycosylase YP_002548271.1 333812 D 311402 CDS YP_002548272.1 222147315 7387831 334931..335197 1 NC_011989.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 335197 rpsT 7387831 rpsT Agrobacterium vitis S4 30S ribosomal protein S20 YP_002548272.1 334931 D 311402 CDS YP_002548273.1 222147316 7387832 336131..337705 1 NC_011989.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 337705 dnaA 7387832 dnaA Agrobacterium vitis S4 chromosomal replication initiation protein YP_002548273.1 336131 D 311402 CDS YP_002548274.1 222147317 7387833 337914..338819 1 NC_011989.1 ABC transporter permease 338819 7387833 Avi_0392 Agrobacterium vitis S4 ABC transporter permease YP_002548274.1 337914 D 311402 CDS YP_002548275.1 222147318 7387834 complement(338839..339579) 1 NC_011989.1 methyltransferase 339579 7387834 Avi_0393 Agrobacterium vitis S4 methyltransferase YP_002548275.1 338839 R 311402 CDS YP_002548276.1 222147319 7387835 complement(339620..340801) 1 NC_011989.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 340801 hemN 7387835 hemN Agrobacterium vitis S4 coproporphyrinogen III oxidase YP_002548276.1 339620 R 311402 CDS YP_002548277.1 222147320 7387836 complement(340808..341452) 1 NC_011989.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 341452 rdgB 7387836 rdgB Agrobacterium vitis S4 putative deoxyribonucleotide triphosphate pyrophosphatase YP_002548277.1 340808 R 311402 CDS YP_002548278.1 222147321 7387837 complement(341462..341878) 1 NC_011989.1 lactoylglutathione lyase 341878 7387837 Avi_0396 Agrobacterium vitis S4 lactoylglutathione lyase YP_002548278.1 341462 R 311402 CDS YP_002548279.1 222147322 7387838 complement(341892..342611) 1 NC_011989.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 342611 rph 7387838 rph Agrobacterium vitis S4 ribonuclease PH YP_002548279.1 341892 R 311402 CDS YP_002548280.1 222147323 7387839 342899..343981 1 NC_011989.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 343981 hrcA 7387839 hrcA Agrobacterium vitis S4 heat-inducible transcription repressor YP_002548280.1 342899 D 311402 CDS YP_002548281.1 222147324 7387840 344081..344695 1 NC_011989.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 344695 grpE 7387840 grpE Agrobacterium vitis S4 heat shock protein GrpE YP_002548281.1 344081 D 311402 CDS YP_002548282.1 222147325 7388423 complement(344845..345309) 1 NC_011989.1 PTS IIA-like nitrogen-regulatory protein PtsN 345309 ptsN 7388423 ptsN Agrobacterium vitis S4 PTS IIA-like nitrogen-regulatory protein PtsN YP_002548282.1 344845 R 311402 CDS YP_002548283.1 222147326 7388424 complement(345382..345948) 1 NC_011989.1 sigma-54 modulation protein 345948 7388424 Avi_0402 Agrobacterium vitis S4 sigma-54 modulation protein YP_002548283.1 345382 R 311402 CDS YP_002548284.1 222147327 7388425 complement(346283..347731) 1 NC_011989.1 RNA polymerase sigma-54 factor 347731 rpoN 7388425 rpoN Agrobacterium vitis S4 RNA polymerase sigma-54 factor YP_002548284.1 346283 R 311402 CDS YP_002548285.1 222147328 7388426 complement(348081..348887) 1 NC_011989.1 ABC transporter ATPase 348887 7388426 Avi_0405 Agrobacterium vitis S4 ABC transporter ATPase YP_002548285.1 348081 R 311402 CDS YP_002548286.1 222147329 7388427 complement(348902..349465) 1 NC_011989.1 cell envelope biogenesis protein YhbN 349465 yhbN 7388427 yhbN Agrobacterium vitis S4 cell envelope biogenesis protein YhbN YP_002548286.1 348902 R 311402 CDS YP_002548287.1 222147330 7388428 complement(349475..350140) 1 NC_011989.1 hypothetical protein 350140 7388428 Avi_0408 Agrobacterium vitis S4 hypothetical protein YP_002548287.1 349475 R 311402 CDS YP_002548288.1 222147331 7388429 350609..350920 1 NC_011989.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 350920 ihfB 7388429 ihfB Agrobacterium vitis S4 integration host factor subunit beta YP_002548288.1 350609 D 311402 CDS YP_002548289.1 222147332 7388430 351154..351504 1 NC_011989.1 hypothetical protein 351504 7388430 Avi_0411 Agrobacterium vitis S4 hypothetical protein YP_002548289.1 351154 D 311402 CDS YP_002548290.1 222147333 7388431 351808..353025 1 NC_011989.1 SAM dependent methyltransferase 353025 7388431 Avi_0413 Agrobacterium vitis S4 SAM dependent methyltransferase YP_002548290.1 351808 D 311402 CDS YP_002548291.1 222147334 7388432 353022..353906 1 NC_011989.1 rRNA methylase 353906 trmH 7388432 trmH Agrobacterium vitis S4 rRNA methylase YP_002548291.1 353022 D 311402 CDS YP_002548292.1 222147335 7388433 353903..354394 1 NC_011989.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 354394 lspA 7388433 lspA Agrobacterium vitis S4 lipoprotein signal peptidase YP_002548292.1 353903 D 311402 CDS YP_002548293.1 222147336 7388434 354824..356458 1 NC_011989.1 two component sensor kinase/response regulator hybrid 356458 barA 7388434 barA Agrobacterium vitis S4 two component sensor kinase/response regulator hybrid YP_002548293.1 354824 D 311402 CDS YP_002548294.1 222147337 7388435 356612..357487 1 NC_011989.1 hypothetical protein 357487 7388435 Avi_0418 Agrobacterium vitis S4 hypothetical protein YP_002548294.1 356612 D 311402 CDS YP_002548295.1 222147338 7388436 complement(357534..357869) 1 NC_011989.1 hypothetical protein 357869 7388436 Avi_0421 Agrobacterium vitis S4 hypothetical protein YP_002548295.1 357534 R 311402 CDS YP_002548296.1 222147339 7388437 357905..358849 1 NC_011989.1 LysR family transcriptional regulator 358849 7388437 Avi_0422 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548296.1 357905 D 311402 CDS YP_002548297.1 222147340 7388438 359072..361723 1 NC_011989.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 361723 mutS 7388438 mutS Agrobacterium vitis S4 DNA mismatch repair protein MutS YP_002548297.1 359072 D 311402 CDS YP_002548298.1 222147341 7388439 361892..364717 1 NC_011989.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 364717 glnD 7388439 glnD Agrobacterium vitis S4 PII uridylyl-transferase YP_002548298.1 361892 D 311402 CDS YP_002548299.1 222147342 7388440 364719..366317 1 NC_011989.1 integral membrane protein MviN 366317 mviN 7388440 mviN Agrobacterium vitis S4 integral membrane protein MviN YP_002548299.1 364719 D 311402 CDS YP_002548300.1 222147343 7388441 366304..366708 1 NC_011989.1 hypothetical protein 366708 7388441 Avi_0426 Agrobacterium vitis S4 hypothetical protein YP_002548300.1 366304 D 311402 CDS YP_002548301.1 222147344 7388442 366815..367879 1 NC_011989.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 367879 trpS 7388442 trpS Agrobacterium vitis S4 tryptophanyl-tRNA synthetase YP_002548301.1 366815 D 311402 CDS YP_002548302.1 222147345 7388443 367969..368460 1 NC_011989.1 Universal stress protein 368460 7388443 Avi_0429 Agrobacterium vitis S4 Universal stress protein YP_002548302.1 367969 D 311402 CDS YP_002548303.1 222147346 7388444 368624..369184 1 NC_011989.1 hypothetical protein 369184 7388444 Avi_0430 Agrobacterium vitis S4 hypothetical protein YP_002548303.1 368624 D 311402 CDS YP_002548304.1 222147347 7388445 369264..369953 1 NC_011989.1 hypothetical protein 369953 7388445 Avi_0432 Agrobacterium vitis S4 hypothetical protein YP_002548304.1 369264 D 311402 CDS YP_002548305.1 222147348 7388446 370126..370623 1 NC_011989.1 acetyltransferase 370623 7388446 Avi_0433 Agrobacterium vitis S4 acetyltransferase YP_002548305.1 370126 D 311402 CDS YP_002548306.1 222147349 7388447 370682..371089 1 NC_011989.1 ferric uptake regulator 371089 fur 7388447 fur Agrobacterium vitis S4 ferric uptake regulator YP_002548306.1 370682 D 311402 CDS YP_002548307.1 222147350 7388448 371121..371918 1 NC_011989.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 371918 plsC 7388448 plsC Agrobacterium vitis S4 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002548307.1 371121 D 311402 CDS YP_002548308.1 222147351 7388449 372009..373442 1 NC_011989.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 373442 miaB 7388449 miaB Agrobacterium vitis S4 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002548308.1 372009 D 311402 CDS YP_002548309.1 222147352 7388450 373484..374557 1 NC_011989.1 phosphate starvation inducible protein 374557 phoH 7388450 phoH Agrobacterium vitis S4 phosphate starvation inducible protein YP_002548309.1 373484 D 311402 CDS YP_002548310.1 222147353 7388451 374594..375097 1 NC_011989.1 hypothetical protein 375097 7388451 Avi_0440 Agrobacterium vitis S4 hypothetical protein YP_002548310.1 374594 D 311402 CDS YP_002548311.1 222147354 7388452 375110..376147 1 NC_011989.1 hemolysin 376147 7388452 Avi_0441 Agrobacterium vitis S4 hemolysin YP_002548311.1 375110 D 311402 CDS YP_002548312.1 222147355 7388453 376377..377963 1 NC_011989.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 377963 lnt 7388453 lnt Agrobacterium vitis S4 apolipoprotein N-acyltransferase YP_002548312.1 376377 D 311402 CDS YP_002548313.1 222147356 7388454 378110..378532 1 NC_011989.1 transcriptional regulator 378532 7388454 Avi_0443 Agrobacterium vitis S4 transcriptional regulator YP_002548313.1 378110 D 311402 CDS YP_002548314.1 222147357 7388455 378706..379944 1 NC_011989.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 379944 metK 7388455 metK Agrobacterium vitis S4 S-adenosylmethionine synthetase YP_002548314.1 378706 D 311402 CDS YP_002548315.1 222147358 7388456 379950..380648 1 NC_011989.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 380648 trmB 7388456 trmB Agrobacterium vitis S4 tRNA (guanine-N(7)-)-methyltransferase YP_002548315.1 379950 D 311402 CDS YP_002548316.1 222147359 7388457 complement(380878..381135) 1 NC_011989.1 hypothetical protein 381135 7388457 Avi_0446 Agrobacterium vitis S4 hypothetical protein YP_002548316.1 380878 R 311402 CDS YP_002548317.1 222147360 7388458 complement(381279..381707) 1 NC_011989.1 small heat shock protein 381707 hspH 7388458 hspH Agrobacterium vitis S4 small heat shock protein YP_002548317.1 381279 R 311402 CDS YP_002548318.1 222147361 7388459 381919..382863 1 NC_011989.1 inosine-uridine preferring nucleoside hydrolase 382863 iunH 7388459 iunH Agrobacterium vitis S4 inosine-uridine preferring nucleoside hydrolase YP_002548318.1 381919 D 311402 CDS YP_002548319.1 222147362 7388460 382946..383698 1 NC_011989.1 hydrolase 383698 7388460 Avi_0449 Agrobacterium vitis S4 hydrolase YP_002548319.1 382946 D 311402 CDS YP_002548320.1 222147363 7388461 383909..384709 1 NC_011989.1 hypothetical protein 384709 7388461 Avi_0450 Agrobacterium vitis S4 hypothetical protein YP_002548320.1 383909 D 311402 CDS YP_002548321.1 222147364 7388462 complement(384842..386710) 1 NC_011989.1 methyl-accepting chemotaxis protein 386710 mcpC 7388462 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548321.1 384842 R 311402 CDS YP_002548322.1 222147365 7387185 complement(387323..388747) 1 NC_011989.1 two component sensor kinase 388747 7387185 Avi_0453 Agrobacterium vitis S4 two component sensor kinase YP_002548322.1 387323 R 311402 CDS YP_002548323.1 222147366 7388464 389401..389790 1 NC_011989.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 389790 rnpA 7388464 rnpA Agrobacterium vitis S4 ribonuclease P YP_002548323.1 389401 D 311402 CDS YP_002548324.1 222147367 7388465 389787..391649 1 NC_011989.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 391649 7388465 Avi_0455 Agrobacterium vitis S4 putative inner membrane protein translocase component YidC YP_002548324.1 389787 D 311402 CDS YP_002548325.1 222147368 7388466 391736..392395 1 NC_011989.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 392395 engB 7388466 engB Agrobacterium vitis S4 ribosome biogenesis GTP-binding protein YsxC YP_002548325.1 391736 D 311402 CDS YP_002548326.1 222147369 7388467 complement(392587..393144) 1 NC_011989.1 hypothetical protein 393144 7388467 Avi_0459 Agrobacterium vitis S4 hypothetical protein YP_002548326.1 392587 R 311402 CDS YP_002548327.1 222147370 7388468 complement(393399..394121) 1 NC_011989.1 hypothetical protein 394121 7388468 Avi_0461 Agrobacterium vitis S4 hypothetical protein YP_002548327.1 393399 R 311402 CDS YP_002548328.1 222147371 7388469 complement(394118..394699) 1 NC_011989.1 sigma factor 394699 sigK 7388469 sigK Agrobacterium vitis S4 sigma factor YP_002548328.1 394118 R 311402 CDS YP_002548329.1 222147372 7388470 394801..395688 1 NC_011989.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 395688 argB 7388470 argB Agrobacterium vitis S4 acetylglutamate kinase YP_002548329.1 394801 D 311402 CDS YP_002548330.1 222147373 7388471 complement(395746..396645) 1 NC_011989.1 ribokinase 396645 rbsK 7388471 rbsK Agrobacterium vitis S4 ribokinase YP_002548330.1 395746 R 311402 CDS YP_002548331.1 222147374 7388472 complement(396732..397970) 1 NC_011989.1 hypothetical protein 397970 7388472 Avi_0466 Agrobacterium vitis S4 hypothetical protein YP_002548331.1 396732 R 311402 CDS YP_002548332.1 222147375 7388473 398422..399657 1 NC_011989.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 399657 flgE 7388473 flgE Agrobacterium vitis S4 flagellar hook protein FlgE YP_002548332.1 398422 D 311402 CDS YP_002548333.1 222147376 7388474 complement(399907..400785) 1 NC_011989.1 hypothetical protein 400785 7388474 Avi_0471 Agrobacterium vitis S4 hypothetical protein YP_002548333.1 399907 R 311402 CDS YP_002548334.1 222147377 7388475 401052..401909 1 NC_011989.1 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 401909 dapD 7388475 dapD Agrobacterium vitis S4 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_002548334.1 401052 D 311402 CDS YP_002548335.1 222147378 7388476 402014..403228 1 NC_011989.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 403228 dapE 7388476 dapE Agrobacterium vitis S4 succinyl-diaminopimelate desuccinylase YP_002548335.1 402014 D 311402 CDS YP_002548336.1 222147379 7388477 403215..403811 1 NC_011989.1 hypothetical protein 403811 7388477 Avi_0475 Agrobacterium vitis S4 hypothetical protein YP_002548336.1 403215 D 311402 CDS YP_002548337.1 222147380 7388478 403945..404541 1 NC_011989.1 Disulfide bonded thioredoxin protein 404541 7388478 Avi_0476 Agrobacterium vitis S4 Disulfide bonded thioredoxin protein YP_002548337.1 403945 D 311402 CDS YP_002548338.1 222147381 7388479 404706..405830 1 NC_011989.1 hydroxypyruvate reductase 405830 7388479 Avi_0477 Agrobacterium vitis S4 hydroxypyruvate reductase YP_002548338.1 404706 D 311402 CDS YP_002548339.1 222147382 7388480 complement(405842..406717) 1 NC_011989.1 chaperonin heat shock protein 33 406717 hslO 7388480 hslO Agrobacterium vitis S4 chaperonin heat shock protein 33 YP_002548339.1 405842 R 311402 CDS YP_002548340.1 222147383 7388481 complement(407123..408040) 1 NC_011989.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 408040 argF 7388481 argF Agrobacterium vitis S4 ornithine carbamoyltransferase YP_002548340.1 407123 R 311402 CDS YP_002548341.1 222147384 7388482 complement(408056..409264) 1 NC_011989.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase 409264 argD 7388482 argD Agrobacterium vitis S4 acetylornithine transaminase YP_002548341.1 408056 R 311402 CDS YP_002548342.1 222147385 7388483 complement(409315..409434) 1 NC_011989.1 hypothetical protein 409434 7388483 Avi_0482 Agrobacterium vitis S4 hypothetical protein YP_002548342.1 409315 R 311402 CDS YP_002548343.1 222147386 7388484 409694..410245 1 NC_011989.1 hypothetical protein 410245 7388484 Avi_0484 Agrobacterium vitis S4 hypothetical protein YP_002548343.1 409694 D 311402 CDS YP_002548344.1 222147387 7388485 complement(410350..411033) 1 NC_011989.1 phosphate regulon transcriptional regulatory protein PhoB 411033 phoB 7388485 phoB Agrobacterium vitis S4 phosphate regulon transcriptional regulatory protein PhoB YP_002548344.1 410350 R 311402 CDS YP_002548345.1 222147388 7388486 complement(411394..412101) 1 NC_011989.1 phosphate transport system regulatory protein PhoU 412101 phoU 7388486 phoU Agrobacterium vitis S4 phosphate transport system regulatory protein PhoU YP_002548345.1 411394 R 311402 CDS YP_002548346.1 222147389 7388487 complement(412145..412960) 1 NC_011989.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 412960 pstB 7388487 pstB Agrobacterium vitis S4 phosphate transporter ATP-binding protein YP_002548346.1 412145 R 311402 CDS YP_002548347.1 222147390 7388488 complement(413059..414396) 1 NC_011989.1 phosphate ABC transporter permease 414396 pstA 7388488 pstA Agrobacterium vitis S4 phosphate ABC transporter permease YP_002548347.1 413059 R 311402 CDS YP_002548348.1 222147391 7388489 complement(414393..415880) 1 NC_011989.1 phosphate ABC transporter permease 415880 pstC 7388489 pstC Agrobacterium vitis S4 phosphate ABC transporter permease YP_002548348.1 414393 R 311402 CDS YP_002548349.1 222147392 7388490 complement(416008..417033) 1 NC_011989.1 ABC transporter substrate binding protein (phosphate) 417033 7388490 Avi_0495 Agrobacterium vitis S4 ABC transporter substrate binding protein (phosphate) YP_002548349.1 416008 R 311402 CDS YP_002548350.1 222147393 7388491 complement(417227..418486) 1 NC_011989.1 phosphate regulon sensor kinase PhoR 418486 phoR 7388491 phoR Agrobacterium vitis S4 phosphate regulon sensor kinase PhoR YP_002548350.1 417227 R 311402 CDS YP_002548351.1 222147394 7388492 418697..419581 1 NC_011989.1 hypothetical protein 419581 7388492 Avi_0497 Agrobacterium vitis S4 hypothetical protein YP_002548351.1 418697 D 311402 CDS YP_002548352.1 222147395 7388493 complement(419688..420977) 1 NC_011989.1 hypothetical protein 420977 7388493 Avi_0499 Agrobacterium vitis S4 hypothetical protein YP_002548352.1 419688 R 311402 CDS YP_002548353.1 222147396 7388494 421269..422234 1 NC_011989.1 hypothetical protein 422234 7388494 Avi_0500 Agrobacterium vitis S4 hypothetical protein YP_002548353.1 421269 D 311402 CDS YP_002548354.1 222147397 7387995 422779..423891 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (proline/glycine/betaine) 423891 7387995 Avi_0501 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (proline/glycine/betaine) YP_002548354.1 422779 D 311402 CDS YP_002548355.1 222147398 7388496 423888..424538 1 NC_011989.1 glycine/betaine ABC transporter permease 424538 7388496 Avi_0502 Agrobacterium vitis S4 glycine/betaine ABC transporter permease YP_002548355.1 423888 D 311402 CDS YP_002548356.1 222147399 7388497 424535..425212 1 NC_011989.1 ABC transporter 425212 7388497 Avi_0503 Agrobacterium vitis S4 ABC transporter YP_002548356.1 424535 D 311402 CDS YP_002548357.1 222147400 7388498 425276..426190 1 NC_011989.1 ABC transporter substrate binding protein (proline/glycine/betaine) 426190 7388498 Avi_0504 Agrobacterium vitis S4 ABC transporter substrate binding protein (proline/glycine/betaine) YP_002548357.1 425276 D 311402 CDS YP_002548358.1 222147401 7388499 426190..427095 1 NC_011989.1 histidine utilization repressor 427095 hutC 7388499 hutC Agrobacterium vitis S4 histidine utilization repressor YP_002548358.1 426190 D 311402 CDS YP_002548359.1 222147402 7388500 427224..428711 1 NC_011989.1 histidine ammonia-lyase 428711 hutH 7388500 hutH Agrobacterium vitis S4 histidine ammonia-lyase YP_002548359.1 427224 D 311402 CDS YP_002548360.1 222147403 7388501 428941..429258 1 NC_011989.1 hypothetical protein 429258 7388501 Avi_0507 Agrobacterium vitis S4 hypothetical protein YP_002548360.1 428941 D 311402 CDS YP_002548361.1 222147404 7388502 complement(429371..430603) 1 NC_011989.1 aminotransferase 430603 7388502 Avi_0508 Agrobacterium vitis S4 aminotransferase YP_002548361.1 429371 R 311402 CDS YP_002548362.1 222147405 7388503 complement(430606..431892) 1 NC_011989.1 ABC transporter permease 431892 7388503 Avi_0509 Agrobacterium vitis S4 ABC transporter permease YP_002548362.1 430606 R 311402 CDS YP_002548363.1 222147406 7388504 complement(431889..432407) 1 NC_011989.1 ABC transporter permease 432407 7388504 Avi_0510 Agrobacterium vitis S4 ABC transporter permease YP_002548363.1 431889 R 311402 CDS YP_002548364.1 222147407 7388921 complement(432418..433413) 1 NC_011989.1 C4-dicarboxylate-binding protein 433413 7388921 Avi_0511 Agrobacterium vitis S4 C4-dicarboxylate-binding protein YP_002548364.1 432418 R 311402 CDS YP_002548365.1 222147408 7388924 433595..434458 1 NC_011989.1 LysR family transcriptional regulator 434458 7388924 Avi_0512 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548365.1 433595 D 311402 CDS YP_002548366.1 222147409 7388925 434492..435784 1 NC_011989.1 MFS permease 435784 7388925 Avi_0513 Agrobacterium vitis S4 MFS permease YP_002548366.1 434492 D 311402 CDS YP_002548367.1 222147410 7388926 435922..436392 1 NC_011989.1 hypothetical protein 436392 7388926 Avi_0514 Agrobacterium vitis S4 hypothetical protein YP_002548367.1 435922 D 311402 CDS YP_002548368.1 222147411 7388927 436775..438265 1 NC_011989.1 coenzyme A transferase 438265 7388927 Avi_0516 Agrobacterium vitis S4 coenzyme A transferase YP_002548368.1 436775 D 311402 CDS YP_002548369.1 222147412 7388928 438328..439734 1 NC_011989.1 hypothetical protein 439734 7388928 Avi_0517 Agrobacterium vitis S4 hypothetical protein YP_002548369.1 438328 D 311402 CDS YP_002548370.1 222147413 7388929 439842..440885 1 NC_011989.1 hypothetical protein 440885 7388929 Avi_0518 Agrobacterium vitis S4 hypothetical protein YP_002548370.1 439842 D 311402 CDS YP_002548371.1 222147414 7388930 441222..441962 1 NC_011989.1 Fnr-like transcriptional activator 441962 7388930 Avi_0519 Agrobacterium vitis S4 Fnr-like transcriptional activator YP_002548371.1 441222 D 311402 CDS YP_002548372.1 222147415 7388931 442287..442688 1 NC_011989.1 two component response regulator 442688 pleD 7388931 pleD Agrobacterium vitis S4 two component response regulator YP_002548372.1 442287 D 311402 CDS YP_002548373.1 222147416 7388932 442685..443179 1 NC_011989.1 hypothetical protein 443179 7388932 Avi_0521 Agrobacterium vitis S4 hypothetical protein YP_002548373.1 442685 D 311402 CDS YP_002548374.1 222147417 7388933 443179..445434 1 NC_011989.1 two component sensor kinase/response regulator hybrid 445434 7388933 Avi_0522 Agrobacterium vitis S4 two component sensor kinase/response regulator hybrid YP_002548374.1 443179 D 311402 CDS YP_002548375.1 222147418 7388934 445552..446631 1 NC_011989.1 Response regulator protein 446631 7388934 Avi_0523 Agrobacterium vitis S4 Response regulator protein YP_002548375.1 445552 D 311402 CDS YP_002548376.1 222147419 7388935 446740..447792 1 NC_011989.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 447792 pyrC 7388935 pyrC Agrobacterium vitis S4 dihydroorotase YP_002548376.1 446740 D 311402 CDS YP_002548377.1 222147420 7388936 448005..449180 1 NC_011989.1 GGDEF family protein 449180 7388936 Avi_0525 Agrobacterium vitis S4 GGDEF family protein YP_002548377.1 448005 D 311402 CDS YP_002548378.1 222147421 7388937 449446..450138 1 NC_011989.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 450138 pyrE 7388937 pyrE Agrobacterium vitis S4 orotate phosphoribosyltransferase YP_002548378.1 449446 D 311402 CDS YP_002548379.1 222147422 7388938 450237..451163 1 NC_011989.1 fructokinase 451163 scrK 7388938 scrK Agrobacterium vitis S4 fructokinase YP_002548379.1 450237 D 311402 CDS YP_002548380.1 222147423 7388939 complement(451216..451608) 1 NC_011989.1 hypothetical protein 451608 7388939 Avi_0533 Agrobacterium vitis S4 hypothetical protein YP_002548380.1 451216 R 311402 CDS YP_002548381.1 222147424 7388940 complement(451611..453236) 1 NC_011989.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 453236 pgi 7388940 pgi Agrobacterium vitis S4 glucose-6-phosphate isomerase YP_002548381.1 451611 R 311402 CDS YP_002548382.1 222147425 7388941 complement(453416..455116) 1 NC_011989.1 activates fatty acids by binding to coenzyme A; Long-chain-fatty-acid--CoA ligase 455116 fadD 7388941 fadD Agrobacterium vitis S4 Long-chain-fatty-acid--CoA ligase YP_002548382.1 453416 R 311402 CDS YP_002548383.1 222147426 7388942 455424..455705 1 NC_011989.1 hypothetical protein 455705 7388942 Avi_0536 Agrobacterium vitis S4 hypothetical protein YP_002548383.1 455424 D 311402 CDS YP_002548384.1 222147427 7388943 complement(455806..457893) 1 NC_011989.1 glycogen debranching enzyme GlgX 457893 glgX 7388943 glgX Agrobacterium vitis S4 glycogen debranching enzyme GlgX YP_002548384.1 455806 R 311402 CDS YP_002548385.1 222147428 7388944 458087..458884 1 NC_011989.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 458884 fabG 7388944 fabG Agrobacterium vitis S4 3-ketoacyl-ACP reductase YP_002548385.1 458087 D 311402 CDS YP_002548386.1 222147429 7388945 459064..459447 1 NC_011989.1 two component response regulator 459447 exsF 7388945 exsF Agrobacterium vitis S4 two component response regulator YP_002548386.1 459064 D 311402 CDS YP_002548387.1 222147430 7388946 complement(459475..460254) 1 NC_011989.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 460254 truA 7388946 truA Agrobacterium vitis S4 tRNA pseudouridine synthase A YP_002548387.1 459475 R 311402 CDS YP_002548388.1 222147431 7388947 complement(460254..461216) 1 NC_011989.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 461216 fmt 7388947 fmt Agrobacterium vitis S4 methionyl-tRNA formyltransferase YP_002548388.1 460254 R 311402 CDS YP_002548389.1 222147432 7388948 complement(461335..461865) 1 NC_011989.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 461865 def 7388948 def Agrobacterium vitis S4 peptide deformylase YP_002548389.1 461335 R 311402 CDS YP_002548390.1 222147433 7388949 complement(461939..462331) 1 NC_011989.1 protein associated with Co2+ and Mg2+ efflux; ApaG 462331 apaG 7388949 apaG Agrobacterium vitis S4 ApaG YP_002548390.1 461939 R 311402 CDS YP_002548391.1 222147434 7388950 complement(462735..463919) 1 NC_011989.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; O-succinylhomoserine sulfhydrylase 463919 metZ 7388950 metZ Agrobacterium vitis S4 O-succinylhomoserine sulfhydrylase YP_002548391.1 462735 R 311402 CDS YP_002548392.1 222147435 7388951 464200..465276 1 NC_011989.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 465276 dcd 7388951 dcd Agrobacterium vitis S4 2'-deoxycytidine 5'-triphosphate deaminase YP_002548392.1 464200 D 311402 CDS YP_002548393.1 222147436 7387996 complement(465548..466264) 1 NC_011989.1 transposase 466264 7387996 Avi_0546 Agrobacterium vitis S4 transposase YP_002548393.1 465548 R 311402 CDS YP_002548394.1 222147437 7388953 466361..466711 1 NC_011989.1 transcriptional regulator ArsR family 466711 7388953 Avi_0547 Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002548394.1 466361 D 311402 CDS YP_002548395.1 222147438 7388954 complement(466892..467278) 1 NC_011989.1 hypothetical protein 467278 7388954 Avi_0548 Agrobacterium vitis S4 hypothetical protein YP_002548395.1 466892 R 311402 CDS YP_002548396.1 222147439 7388955 complement(467275..467652) 1 NC_011989.1 hypothetical protein 467652 7388955 Avi_0549 Agrobacterium vitis S4 hypothetical protein YP_002548396.1 467275 R 311402 CDS YP_002548397.1 222147440 7388956 complement(467802..468503) 1 NC_011989.1 polyketide biosynthesis associated protein 468503 7388956 Avi_0550 Agrobacterium vitis S4 polyketide biosynthesis associated protein YP_002548397.1 467802 R 311402 CDS YP_002548398.1 222147441 7388957 468621..469301 1 NC_011989.1 carboxylesterase 469301 7388957 Avi_0551 Agrobacterium vitis S4 carboxylesterase YP_002548398.1 468621 D 311402 CDS YP_002548399.1 222147442 7388958 complement(469399..470292) 1 NC_011989.1 hypothetical protein 470292 gguC 7388958 gguC Agrobacterium vitis S4 hypothetical protein YP_002548399.1 469399 R 311402 CDS YP_002548400.1 222147443 7388959 complement(470432..471793) 1 NC_011989.1 hypothetical protein 471793 7388959 Avi_0553 Agrobacterium vitis S4 hypothetical protein YP_002548400.1 470432 R 311402 CDS YP_002548401.1 222147444 7388960 472157..473032 1 NC_011989.1 LysR family transcriptional regulator 473032 7388960 Avi_0554 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548401.1 472157 D 311402 CDS YP_002548402.1 222147445 7388961 complement(473273..474115) 1 NC_011989.1 LysR family transcriptional regulator 474115 7388961 Avi_0555 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548402.1 473273 R 311402 CDS YP_002548403.1 222147446 7388962 474389..474898 1 NC_011989.1 glutathione S-transferase 474898 attY 7388962 attY Agrobacterium vitis S4 glutathione S-transferase YP_002548403.1 474389 D 311402 CDS YP_002548404.1 222147447 7388964 476132..476833 1 NC_011989.1 transposase 476833 7388964 Avi_0561 Agrobacterium vitis S4 transposase YP_002548404.1 476132 D 311402 CDS YP_002548405.1 222147448 7388965 477471..478187 1 NC_011989.1 transposase 478187 7388965 Avi_0563 Agrobacterium vitis S4 transposase YP_002548405.1 477471 D 311402 CDS YP_002548406.1 222147449 7388966 complement(478470..479471) 1 NC_011989.1 hypothetical protein 479471 7388966 Avi_0566 Agrobacterium vitis S4 hypothetical protein YP_002548406.1 478470 R 311402 CDS YP_002548407.1 222147450 7388967 complement(479498..480973) 1 NC_011989.1 secretion protein HlyD family 480973 7388967 Avi_0567 Agrobacterium vitis S4 secretion protein HlyD family YP_002548407.1 479498 R 311402 CDS YP_002548408.1 222147451 7388968 complement(480970..483123) 1 NC_011989.1 ABC transporter ATPase 483123 7388968 Avi_0570 Agrobacterium vitis S4 ABC transporter ATPase YP_002548408.1 480970 R 311402 CDS YP_002548409.1 222147452 7388969 complement(483217..491265) 1 NC_011989.1 hypothetical protein 491265 7388969 Avi_0571 Agrobacterium vitis S4 hypothetical protein YP_002548409.1 483217 R 311402 CDS YP_002548410.1 222147453 7388970 complement(491878..492924) 1 NC_011989.1 hypothetical protein 492924 7388970 Avi_0572 Agrobacterium vitis S4 hypothetical protein YP_002548410.1 491878 R 311402 CDS YP_002548411.1 222147454 7388971 complement(494188..494532) 1 NC_011989.1 hypothetical protein 494532 7388971 Avi_0574 Agrobacterium vitis S4 hypothetical protein YP_002548411.1 494188 R 311402 CDS YP_002548412.1 222147455 7388972 complement(494605..494844) 1 NC_011989.1 hypothetical protein 494844 7388972 Avi_0575 Agrobacterium vitis S4 hypothetical protein YP_002548412.1 494605 R 311402 CDS YP_002548413.1 222147456 7388973 495277..496407 1 NC_011989.1 hypothetical protein 496407 7388973 Avi_0576 Agrobacterium vitis S4 hypothetical protein YP_002548413.1 495277 D 311402 CDS YP_002548414.1 222147457 7388974 complement(496646..498640) 1 NC_011989.1 glycosyltransferase 498640 7388974 Avi_0577 Agrobacterium vitis S4 glycosyltransferase YP_002548414.1 496646 R 311402 CDS YP_002548415.1 222147458 7388975 498658..499578 1 NC_011989.1 amino acid ABC transporter substrate-binding protein 499578 7388975 Avi_0578 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002548415.1 498658 D 311402 CDS YP_002548416.1 222147459 7388976 complement(499598..500011) 1 NC_011989.1 hypothetical protein 500011 7388976 Avi_0579 Agrobacterium vitis S4 hypothetical protein YP_002548416.1 499598 R 311402 CDS YP_002548417.1 222147460 7388977 complement(500186..500860) 1 NC_011989.1 bacteriophage repressor protein 500860 7388977 Avi_0583 Agrobacterium vitis S4 bacteriophage repressor protein YP_002548417.1 500186 R 311402 CDS YP_002548418.1 222147461 7388978 complement(501085..501732) 1 NC_011989.1 two component response regulator 501732 7388978 Avi_0584 Agrobacterium vitis S4 two component response regulator YP_002548418.1 501085 R 311402 CDS YP_002548419.1 222147462 7388979 502096..502527 1 NC_011989.1 hypothetical protein 502527 7388979 Avi_0585 Agrobacterium vitis S4 hypothetical protein YP_002548419.1 502096 D 311402 CDS YP_002548420.1 222147463 7388980 502524..503615 1 NC_011989.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 503615 pyrD 7388980 pyrD Agrobacterium vitis S4 dihydroorotate dehydrogenase 2 YP_002548420.1 502524 D 311402 CDS YP_002548421.1 222147464 7388981 complement(503591..504934) 1 NC_011989.1 DNA-damage-inducible protein F 504934 dinF 7388981 dinF Agrobacterium vitis S4 DNA-damage-inducible protein F YP_002548421.1 503591 R 311402 CDS YP_002548422.1 222147465 7388982 complement(504978..505547) 1 NC_011989.1 hypothetical protein 505547 7388982 Avi_0588 Agrobacterium vitis S4 hypothetical protein YP_002548422.1 504978 R 311402 CDS YP_002548423.1 222147466 7388983 complement(505570..505836) 1 NC_011989.1 hypothetical protein 505836 7388983 Avi_0589 Agrobacterium vitis S4 hypothetical protein YP_002548423.1 505570 R 311402 CDS YP_002548424.1 222147467 7388984 506006..506986 1 NC_011989.1 methyltransferase 506986 7388984 Avi_0591 Agrobacterium vitis S4 methyltransferase YP_002548424.1 506006 D 311402 CDS YP_002548425.1 222147468 7388985 507109..507753 1 NC_011989.1 hypothetical protein 507753 7388985 Avi_0592 Agrobacterium vitis S4 hypothetical protein YP_002548425.1 507109 D 311402 CDS YP_002548426.1 222147469 7388986 507853..508815 1 NC_011989.1 hydrolase 508815 7388986 Avi_0593 Agrobacterium vitis S4 hydrolase YP_002548426.1 507853 D 311402 CDS YP_002548427.1 222147470 7388987 509280..509831 1 NC_011989.1 hypothetical protein 509831 7388987 Avi_0596 Agrobacterium vitis S4 hypothetical protein YP_002548427.1 509280 D 311402 CDS YP_002548428.1 222147471 7388988 complement(509894..512107) 1 NC_011989.1 enoyl-CoA hydratase 512107 fadB 7388988 fadB Agrobacterium vitis S4 enoyl-CoA hydratase YP_002548428.1 509894 R 311402 CDS YP_002548429.1 222147472 7388989 complement(512123..513331) 1 NC_011989.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 513331 7388989 Avi_0598 Agrobacterium vitis S4 acetyl-CoA acetyltransferase YP_002548429.1 512123 R 311402 CDS YP_002548430.1 222147473 7388990 complement(513407..515200) 1 NC_011989.1 acyl-CoA dehydrogenase 515200 acd 7388990 acd Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002548430.1 513407 R 311402 CDS YP_002548431.1 222147474 7388991 515606..519433 1 NC_011989.1 hypothetical protein 519433 7388991 Avi_0601 Agrobacterium vitis S4 hypothetical protein YP_002548431.1 515606 D 311402 CDS YP_002548432.1 222147475 7388992 519822..520745 1 NC_011989.1 hypothetical protein 520745 7388992 Avi_0602 Agrobacterium vitis S4 hypothetical protein YP_002548432.1 519822 D 311402 CDS YP_002548433.1 222147476 7388993 520772..521560 1 NC_011989.1 hypothetical protein 521560 7388993 Avi_0603 Agrobacterium vitis S4 hypothetical protein YP_002548433.1 520772 D 311402 CDS YP_002548434.1 222147477 7388994 521666..523420 1 NC_011989.1 alkaline phosphatase 523420 7388994 Avi_0605 Agrobacterium vitis S4 alkaline phosphatase YP_002548434.1 521666 D 311402 CDS YP_002548435.1 222147478 7388995 523576..524043 1 NC_011989.1 hypothetical protein 524043 7388995 Avi_0606 Agrobacterium vitis S4 hypothetical protein YP_002548435.1 523576 D 311402 CDS YP_002548436.1 222147479 7388996 524050..524763 1 NC_011989.1 ABC transporter ATPase 524763 7388996 Avi_0607 Agrobacterium vitis S4 ABC transporter ATPase YP_002548436.1 524050 D 311402 CDS YP_002548437.1 222147480 7388997 524760..526037 1 NC_011989.1 permease component protein 526037 7388997 Avi_0608 Agrobacterium vitis S4 permease component protein YP_002548437.1 524760 D 311402 CDS YP_002548438.1 222147481 7388998 526158..527543 1 NC_011989.1 acid phosphatase 527543 7388998 Avi_0609 Agrobacterium vitis S4 acid phosphatase YP_002548438.1 526158 D 311402 CDS YP_002548439.1 222147482 7388999 complement(527652..529601) 1 NC_011989.1 two component response regulator 529601 pleD 7388999 pleD Agrobacterium vitis S4 two component response regulator YP_002548439.1 527652 R 311402 CDS YP_002548440.1 222147483 7389000 529864..530511 1 NC_011989.1 hypothetical protein 530511 7389000 Avi_0612 Agrobacterium vitis S4 hypothetical protein YP_002548440.1 529864 D 311402 CDS YP_002548441.1 222147484 7389001 530611..531381 1 NC_011989.1 amino acid ABC transporter substrate-binding protein 531381 7389001 Avi_0614 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002548441.1 530611 D 311402 CDS YP_002548442.1 222147485 7389002 531452..533959 1 NC_011989.1 large ATP-dependent helicase-like protein 533959 lhr 7389002 lhr Agrobacterium vitis S4 large ATP-dependent helicase-like protein YP_002548442.1 531452 D 311402 CDS YP_002548443.1 222147486 7389003 533991..534719 1 NC_011989.1 hypothetical protein 534719 7389003 Avi_0616 Agrobacterium vitis S4 hypothetical protein YP_002548443.1 533991 D 311402 CDS YP_002548444.1 222147487 7389004 complement(534741..536150) 1 NC_011989.1 serine/threonine protein kinase 536150 7389004 Avi_0617 Agrobacterium vitis S4 serine/threonine protein kinase YP_002548444.1 534741 R 311402 CDS YP_002548445.1 222147488 7389005 complement(536152..536922) 1 NC_011989.1 phosphoesterase 536922 7389005 Avi_0618 Agrobacterium vitis S4 phosphoesterase YP_002548445.1 536152 R 311402 CDS YP_002548446.1 222147489 7388258 complement(537213..537695) 1 NC_011989.1 autotransporter protein 537695 bapA 7388258 bapA Agrobacterium vitis S4 autotransporter protein YP_002548446.1 537213 R 311402 CDS YP_002548447.1 222147490 7388673 complement(538015..541524) 1 NC_011989.1 two component sensor kinase/response regulator hybrid 541524 7388673 Avi_0620 Agrobacterium vitis S4 two component sensor kinase/response regulator hybrid YP_002548447.1 538015 R 311402 CDS YP_002548448.1 222147491 7388674 541815..542249 1 NC_011989.1 large conductance mechanosensitive channel protein 542249 mscL 7388674 mscL Agrobacterium vitis S4 large conductance mechanosensitive channel protein YP_002548448.1 541815 D 311402 CDS YP_002548449.1 222147492 7388675 542472..543659 1 NC_011989.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 543659 aspB 7388675 aspB Agrobacterium vitis S4 aspartate aminotransferase YP_002548449.1 542472 D 311402 CDS YP_002548450.1 222147493 7388676 544304..545074 1 NC_011989.1 glucose-1-phosphate cytidylyltransferase 545074 rfbF 7388676 rfbF Agrobacterium vitis S4 glucose-1-phosphate cytidylyltransferase YP_002548450.1 544304 D 311402 CDS YP_002548451.1 222147494 7388677 545059..546159 1 NC_011989.1 CDP-glucose 4,6-dehydratase 546159 rfbG 7388677 rfbG Agrobacterium vitis S4 CDP-glucose 4,6-dehydratase YP_002548451.1 545059 D 311402 CDS YP_002548452.1 222147495 7388678 546156..546719 1 NC_011989.1 dTDP-4-dehydrorhamnose 3,5-epimerase 546719 rfbC 7388678 rfbC Agrobacterium vitis S4 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002548452.1 546156 D 311402 CDS YP_002548453.1 222147496 7388679 546716..547945 1 NC_011989.1 hypothetical protein 547945 7388679 Avi_0629 Agrobacterium vitis S4 hypothetical protein YP_002548453.1 546716 D 311402 CDS YP_002548454.1 222147497 7388680 548070..549410 1 NC_011989.1 glycosyltransferase 549410 7388680 Avi_0631 Agrobacterium vitis S4 glycosyltransferase YP_002548454.1 548070 D 311402 CDS YP_002548455.1 222147498 7388681 complement(549633..550445) 1 NC_011989.1 cephalosporin protein 550445 7388681 Avi_0632 Agrobacterium vitis S4 cephalosporin protein YP_002548455.1 549633 R 311402 CDS YP_002548456.1 222147499 7388682 550669..551541 1 NC_011989.1 epimerase 551541 7388682 Avi_0633 Agrobacterium vitis S4 epimerase YP_002548456.1 550669 D 311402 CDS YP_002548457.1 222147500 7387184 complement(553249..553458) 1 NC_011989.1 hypothetical protein 553458 7387184 Avi_0636 Agrobacterium vitis S4 hypothetical protein YP_002548457.1 553249 R 311402 CDS YP_002548458.1 222147501 7388684 complement(553515..554135) 1 NC_011989.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 554135 7388684 Avi_0638 Agrobacterium vitis S4 Maf-like protein YP_002548458.1 553515 R 311402 CDS YP_002548459.1 222147502 7388685 complement(554152..554370) 1 NC_011989.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 554370 infA 7388685 infA Agrobacterium vitis S4 translation initiation factor IF-1 YP_002548459.1 554152 R 311402 CDS YP_002548460.1 222147503 7388686 complement(554492..554995) 1 NC_011989.1 hypothetical protein 554995 7388686 Avi_0641 Agrobacterium vitis S4 hypothetical protein YP_002548460.1 554492 R 311402 CDS YP_002548461.1 222147504 7388687 complement(555006..555479) 1 NC_011989.1 hypothetical protein 555479 7388687 Avi_0642 Agrobacterium vitis S4 hypothetical protein YP_002548461.1 555006 R 311402 CDS YP_002548462.1 222147505 7388688 complement(555483..556781) 1 NC_011989.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 556781 hisD 7388688 hisD Agrobacterium vitis S4 histidinol dehydrogenase YP_002548462.1 555483 R 311402 CDS YP_002548463.1 222147506 7388689 complement(556816..557271) 1 NC_011989.1 hypothetical protein 557271 7388689 Avi_0644 Agrobacterium vitis S4 hypothetical protein YP_002548463.1 556816 R 311402 CDS YP_002548464.1 222147507 7388690 complement(557371..558663) 1 NC_011989.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 558663 murA 7388690 murA Agrobacterium vitis S4 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002548464.1 557371 R 311402 CDS YP_002548465.1 222147508 7388691 complement(558798..559046) 1 NC_011989.1 hypothetical protein 559046 7388691 Avi_0646 Agrobacterium vitis S4 hypothetical protein YP_002548465.1 558798 R 311402 CDS YP_002548466.1 222147509 7387997 559710..560363 1 NC_011989.1 hypothetical protein 560363 7387997 Avi_0647 Agrobacterium vitis S4 hypothetical protein YP_002548466.1 559710 D 311402 CDS YP_002548467.1 222147510 7388693 complement(560424..561521) 1 NC_011989.1 transposase 561521 7388693 Avi_0648 Agrobacterium vitis S4 transposase YP_002548467.1 560424 R 311402 CDS YP_002548468.1 222147511 7388694 complement(561680..562024) 1 NC_011989.1 hypothetical protein 562024 7388694 Avi_9910 Agrobacterium vitis S4 hypothetical protein YP_002548468.1 561680 R 311402 CDS YP_002548469.1 222147512 7387966 562782..563984 1 NC_011989.1 hypothetical protein 563984 7387966 Avi_0649 Agrobacterium vitis S4 hypothetical protein YP_002548469.1 562782 D 311402 CDS YP_002548470.1 222147513 7388695 563971..566100 1 NC_011989.1 ATPase 566100 7388695 Avi_0650 Agrobacterium vitis S4 ATPase YP_002548470.1 563971 D 311402 CDS YP_002548471.1 222147514 7388696 complement(567360..567950) 1 NC_011989.1 Transcriptional regulator protein 567950 7388696 Avi_0652 Agrobacterium vitis S4 Transcriptional regulator protein YP_002548471.1 567360 R 311402 CDS YP_002548472.1 222147515 7388697 568071..568496 1 NC_011989.1 hypothetical protein 568496 7388697 Avi_0654 Agrobacterium vitis S4 hypothetical protein YP_002548472.1 568071 D 311402 CDS YP_002548473.1 222147516 7388698 568575..568970 1 NC_011989.1 hypothetical protein 568970 7388698 Avi_0656 Agrobacterium vitis S4 hypothetical protein YP_002548473.1 568575 D 311402 CDS YP_002548474.1 222147517 7388699 569268..569900 1 NC_011989.1 phage integrase 569900 7388699 Avi_0658 Agrobacterium vitis S4 phage integrase YP_002548474.1 569268 D 311402 CDS YP_002548475.1 222147518 7388700 570317..570907 1 NC_011989.1 TetR family transcriptional regulator 570907 7388700 Avi_0659 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002548475.1 570317 D 311402 CDS YP_002548476.1 222147519 7388701 570927..571211 1 NC_011989.1 hypothetical protein 571211 7388701 Avi_0660 Agrobacterium vitis S4 hypothetical protein YP_002548476.1 570927 D 311402 CDS YP_002548477.1 222147520 7388702 571215..571958 1 NC_011989.1 3-methyladenine DNA glycosylase 571958 tag 7388702 tag Agrobacterium vitis S4 3-methyladenine DNA glycosylase YP_002548477.1 571215 D 311402 CDS YP_002548478.1 222147521 7388703 complement(572391..573107) 1 NC_011989.1 metal dependent hydrolase 573107 7388703 Avi_0664 Agrobacterium vitis S4 metal dependent hydrolase YP_002548478.1 572391 R 311402 CDS YP_002548479.1 222147522 7388704 complement(573252..573578) 1 NC_011989.1 hypothetical protein 573578 7388704 Avi_0666 Agrobacterium vitis S4 hypothetical protein YP_002548479.1 573252 R 311402 CDS YP_002548480.1 222147523 7388705 complement(573584..574129) 1 NC_011989.1 hypothetical protein 574129 7388705 Avi_0667 Agrobacterium vitis S4 hypothetical protein YP_002548480.1 573584 R 311402 CDS YP_002548481.1 222147524 7388706 574298..575197 1 NC_011989.1 LysR family transcriptional regulator 575197 gcvA 7388706 gcvA Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548481.1 574298 D 311402 CDS YP_002548482.1 222147525 7388707 complement(576187..576663) 1 NC_011989.1 hypothetical protein 576663 7388707 Avi_0672 Agrobacterium vitis S4 hypothetical protein YP_002548482.1 576187 R 311402 CDS YP_002548483.1 222147526 7388708 576893..577795 1 NC_011989.1 hypothetical protein 577795 7388708 Avi_0673 Agrobacterium vitis S4 hypothetical protein YP_002548483.1 576893 D 311402 CDS YP_002548484.1 222147527 7388709 577838..578497 1 NC_011989.1 hypothetical protein 578497 7388709 Avi_0674 Agrobacterium vitis S4 hypothetical protein YP_002548484.1 577838 D 311402 CDS YP_002548485.1 222147528 7388710 578895..580172 1 NC_011989.1 ATPase, AAA+ superfamily protein 580172 7388710 Avi_0676 Agrobacterium vitis S4 ATPase, AAA+ superfamily protein YP_002548485.1 578895 D 311402 CDS YP_002548486.1 222147529 7388711 complement(580497..581183) 1 NC_011989.1 hypothetical protein 581183 7388711 Avi_0677 Agrobacterium vitis S4 hypothetical protein YP_002548486.1 580497 R 311402 CDS YP_002548487.1 222147530 7388712 complement(581652..581999) 1 NC_011989.1 hypothetical protein 581999 7388712 Avi_0679 Agrobacterium vitis S4 hypothetical protein YP_002548487.1 581652 R 311402 CDS YP_002548488.1 222147531 7388713 complement(581996..583660) 1 NC_011989.1 agrobacteirum virulence protein VirD4 583660 7388713 Avi_0680 Agrobacterium vitis S4 agrobacteirum virulence protein VirD4 YP_002548488.1 581996 R 311402 CDS YP_002548489.1 222147532 7388714 584243..587560 1 NC_011989.1 Ti-type conjugative transfer relaxase TraA 587560 traA 7388714 traA Agrobacterium vitis S4 Ti-type conjugative transfer relaxase TraA YP_002548489.1 584243 D 311402 CDS YP_002548490.1 222147533 7388715 587844..589361 1 NC_011989.1 IS21 family transposase 589361 istA 7388715 istA Agrobacterium vitis S4 IS21 family transposase YP_002548490.1 587844 D 311402 CDS YP_002548491.1 222147534 7388716 589351..590145 1 NC_011989.1 IS21 family transposase 590145 istB 7388716 istB Agrobacterium vitis S4 IS21 family transposase YP_002548491.1 589351 D 311402 CDS YP_002548492.1 222147535 7388718 590874..591326 1 NC_011989.1 transposase 591326 7388718 Avi_0686 Agrobacterium vitis S4 transposase YP_002548492.1 590874 D 311402 CDS YP_002548493.1 222147536 7388719 591323..591676 1 NC_011989.1 transposase 591676 7388719 Avi_0687 Agrobacterium vitis S4 transposase YP_002548493.1 591323 D 311402 CDS YP_002548494.1 222147537 7388720 591722..593380 1 NC_011989.1 transposase 593380 7388720 Avi_0688 Agrobacterium vitis S4 transposase YP_002548494.1 591722 D 311402 CDS YP_002548495.1 222147538 7388721 complement(593361..593594) 1 NC_011989.1 hypothetical protein 593594 7388721 Avi_0689 Agrobacterium vitis S4 hypothetical protein YP_002548495.1 593361 R 311402 CDS YP_002548496.1 222147539 7388723 593930..594283 1 NC_011989.1 transposase 594283 7388723 Avi_0692 Agrobacterium vitis S4 transposase YP_002548496.1 593930 D 311402 CDS YP_002548497.1 222147540 7388724 594353..595966 1 NC_011989.1 transposase 595966 7388724 Avi_0693 Agrobacterium vitis S4 transposase YP_002548497.1 594353 D 311402 CDS YP_002548498.1 222147541 7388725 595963..596295 1 NC_011989.1 hypothetical protein 596295 7388725 Avi_0695 Agrobacterium vitis S4 hypothetical protein YP_002548498.1 595963 D 311402 CDS YP_002548499.1 222147542 7388726 596548..596751 1 NC_011989.1 ISL3 family transposase 596751 tnpA 7388726 tnpA Agrobacterium vitis S4 ISL3 family transposase YP_002548499.1 596548 D 311402 CDS YP_002548500.1 222147543 7388727 complement(596793..598874) 1 NC_011989.1 subtilisin-like serine protease 598874 7388727 Avi_0697 Agrobacterium vitis S4 subtilisin-like serine protease YP_002548500.1 596793 R 311402 CDS YP_002548501.1 222147544 7388728 complement(598862..599650) 1 NC_011989.1 peptidase S1 (chymotrypsin) family protein 599650 7388728 Avi_9911 Agrobacterium vitis S4 peptidase S1 (chymotrypsin) family protein YP_002548501.1 598862 R 311402 CDS YP_002548502.1 222147545 7387967 complement(600364..600570) 1 NC_011989.1 transcriptional regulator protein 600570 7387967 Avi_0698 Agrobacterium vitis S4 transcriptional regulator protein YP_002548502.1 600364 R 311402 CDS YP_002548503.1 222147546 7388729 601327..601914 1 NC_011989.1 hypothetical protein 601914 7388729 Avi_0700 Agrobacterium vitis S4 hypothetical protein YP_002548503.1 601327 D 311402 CDS YP_002548504.1 222147547 7388730 complement(602223..602606) 1 NC_011989.1 nucleic acid-binding protein 602606 7388730 Avi_0701 Agrobacterium vitis S4 nucleic acid-binding protein YP_002548504.1 602223 R 311402 CDS YP_002548505.1 222147548 7388731 complement(602603..602803) 1 NC_011989.1 hypothetical protein 602803 7388731 Avi_0702 Agrobacterium vitis S4 hypothetical protein YP_002548505.1 602603 R 311402 CDS YP_002548506.1 222147549 7388732 complement(604211..607426) 1 NC_011989.1 phosphohydrolase 607426 7388732 Avi_0703 Agrobacterium vitis S4 phosphohydrolase YP_002548506.1 604211 R 311402 CDS YP_002548507.1 222147550 7388733 607855..608529 1 NC_011989.1 chromosome partitioning protein 608529 parA 7388733 parA Agrobacterium vitis S4 chromosome partitioning protein YP_002548507.1 607855 D 311402 CDS YP_002548508.1 222147551 7388735 610760..611791 1 NC_011989.1 Integrase 611791 7388735 Avi_0710 Agrobacterium vitis S4 Integrase YP_002548508.1 610760 D 311402 CDS YP_002548509.1 222147552 7388736 complement(612093..613340) 1 NC_011989.1 Capsule polysaccharide export protein 613340 7388736 Avi_0711 Agrobacterium vitis S4 Capsule polysaccharide export protein YP_002548509.1 612093 R 311402 CDS YP_002548510.1 222147553 7388737 complement(613398..614051) 1 NC_011989.1 cell surface polysaccharide export ABC-2 transporter ATP-binding protein 614051 7388737 Avi_0712 Agrobacterium vitis S4 cell surface polysaccharide export ABC-2 transporter ATP-binding protein YP_002548510.1 613398 R 311402 CDS YP_002548511.1 222147554 7388738 complement(614054..615301) 1 NC_011989.1 capsule polysaccharide export inner-membrane protein 615301 7388738 Avi_0713 Agrobacterium vitis S4 capsule polysaccharide export inner-membrane protein YP_002548511.1 614054 R 311402 CDS YP_002548512.1 222147555 7388740 617987..619612 1 NC_011989.1 ABC transporter ATPase 619612 7388740 Avi_0716 Agrobacterium vitis S4 ABC transporter ATPase YP_002548512.1 617987 D 311402 CDS YP_002548513.1 222147556 7388741 complement(619621..620517) 1 NC_011989.1 transcriptional regulator protein 620517 7388741 Avi_0717 Agrobacterium vitis S4 transcriptional regulator protein YP_002548513.1 619621 R 311402 CDS YP_002548514.1 222147557 7388742 620784..622958 1 NC_011989.1 hydroxamate-type ferrisiderophore receptor 622958 fhuA 7388742 fhuA Agrobacterium vitis S4 hydroxamate-type ferrisiderophore receptor YP_002548514.1 620784 D 311402 CDS YP_002548515.1 222147558 7388743 623089..623967 1 NC_011989.1 hypothetical protein 623967 7388743 Avi_0719 Agrobacterium vitis S4 hypothetical protein YP_002548515.1 623089 D 311402 CDS YP_002548516.1 222147559 7388744 complement(624176..624619) 1 NC_011989.1 hypothetical protein 624619 7388744 Avi_0720 Agrobacterium vitis S4 hypothetical protein YP_002548516.1 624176 R 311402 CDS YP_002548517.1 222147560 7388745 complement(624625..625710) 1 NC_011989.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 625710 flhB 7388745 flhB Agrobacterium vitis S4 flagellar biosynthesis protein FlhB YP_002548517.1 624625 R 311402 CDS YP_002548518.1 222147561 7388746 complement(625982..627025) 1 NC_011989.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 627025 fliG 7388746 fliG Agrobacterium vitis S4 flagellar motor switch protein G YP_002548518.1 625982 R 311402 CDS YP_002548519.1 222147562 7388747 complement(627055..627717) 1 NC_011989.1 flagellar motor switch protein FliN 627717 fliN 7388747 fliN Agrobacterium vitis S4 flagellar motor switch protein FliN YP_002548519.1 627055 R 311402 CDS YP_002548520.1 222147563 7388748 complement(627781..628740) 1 NC_011989.1 flagellar motor switch protein 628740 fliM 7388748 fliM Agrobacterium vitis S4 flagellar motor switch protein YP_002548520.1 627781 R 311402 CDS YP_002548521.1 222147564 7388749 complement(628737..629612) 1 NC_011989.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 629612 motA 7388749 motA Agrobacterium vitis S4 flagellar motor protein MotA YP_002548521.1 628737 R 311402 CDS YP_002548522.1 222147565 7388750 629938..630672 1 NC_011989.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgF 630672 flgF 7388750 flgF Agrobacterium vitis S4 flagellar basal body rod protein FlgF YP_002548522.1 629938 D 311402 CDS YP_002548523.1 222147566 7388751 630695..632089 1 NC_011989.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 632089 fliI 7388751 fliI Agrobacterium vitis S4 flagellum-specific ATP synthase YP_002548523.1 630695 D 311402 CDS YP_002548524.1 222147567 7388752 632157..632642 1 NC_011989.1 hypothetical protein 632642 7388752 Avi_0732 Agrobacterium vitis S4 hypothetical protein YP_002548524.1 632157 D 311402 CDS YP_002548525.1 222147568 7388753 632932..633324 1 NC_011989.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB 633324 flgB 7388753 flgB Agrobacterium vitis S4 flagellar basal body rod protein FlgB YP_002548525.1 632932 D 311402 CDS YP_002548526.1 222147569 7388754 633328..633765 1 NC_011989.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 633765 flgC 7388754 flgC Agrobacterium vitis S4 flagellar basal body rod protein FlgC YP_002548526.1 633328 D 311402 CDS YP_002548527.1 222147570 7386496 633762..634136 1 NC_011989.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar hook-basal body protein FliE 634136 fliE 7386496 fliE Agrobacterium vitis S4 flagellar hook-basal body protein FliE YP_002548527.1 633762 D 311402 CDS YP_002548528.1 222147571 7386247 634155..634946 1 NC_011989.1 flagellar basal-body rod protein 634946 flgG 7386247 flgG Agrobacterium vitis S4 flagellar basal-body rod protein YP_002548528.1 634155 D 311402 CDS YP_002548529.1 222147572 7386248 634964..635443 1 NC_011989.1 flagellar protein FLGA precursor 635443 flgA 7386248 flgA Agrobacterium vitis S4 flagellar protein FLGA precursor YP_002548529.1 634964 D 311402 CDS YP_002548530.1 222147573 7386249 635440..636555 1 NC_011989.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 636555 flgI 7386249 flgI Agrobacterium vitis S4 flagellar basal body P-ring protein YP_002548530.1 635440 D 311402 CDS YP_002548531.1 222147574 7386250 636552..637121 1 NC_011989.1 hypothetical protein 637121 7386250 Avi_0743 Agrobacterium vitis S4 hypothetical protein YP_002548531.1 636552 D 311402 CDS YP_002548532.1 222147575 7386251 637118..637831 1 NC_011989.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 637831 flgH 7386251 flgH Agrobacterium vitis S4 flagellar basal body L-ring protein YP_002548532.1 637118 D 311402 CDS YP_002548533.1 222147576 7386252 637997..638515 1 NC_011989.1 flagellar protein 638515 fliL 7386252 fliL Agrobacterium vitis S4 flagellar protein YP_002548533.1 637997 D 311402 CDS YP_002548534.1 222147577 7386253 638512..639249 1 NC_011989.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 639249 fliP 7386253 fliP Agrobacterium vitis S4 flagellar biosynthesis protein FliP YP_002548534.1 638512 D 311402 CDS YP_002548535.1 222147578 7386254 639514..640476 1 NC_011989.1 flagella associated protein 640476 flaA 7386254 flaA Agrobacterium vitis S4 flagella associated protein YP_002548535.1 639514 D 311402 CDS YP_002548536.1 222147579 7386255 640763..641725 1 NC_011989.1 flagella associated protein 641725 flaA 7386255 flaA Agrobacterium vitis S4 flagella associated protein YP_002548536.1 640763 D 311402 CDS YP_002548537.1 222147580 7386256 642114..643076 1 NC_011989.1 flagella associated protein 643076 flaA 7386256 flaA Agrobacterium vitis S4 flagella associated protein YP_002548537.1 642114 D 311402 CDS YP_002548538.1 222147581 7386257 643490..644452 1 NC_011989.1 flagella associated protein 644452 flaA 7386257 flaA Agrobacterium vitis S4 flagella associated protein YP_002548538.1 643490 D 311402 CDS YP_002548539.1 222147582 7386258 644858..645820 1 NC_011989.1 flaB 645820 flaB 7386258 flaB Agrobacterium vitis S4 flaB YP_002548539.1 644858 D 311402 CDS YP_002548540.1 222147583 7386259 646296..646946 1 NC_011989.1 GTPase 646946 7386259 Avi_0755 Agrobacterium vitis S4 GTPase YP_002548540.1 646296 D 311402 CDS YP_002548541.1 222147584 7386260 646943..648277 1 NC_011989.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 648277 motB 7386260 motB Agrobacterium vitis S4 flagellar motor protein MotB YP_002548541.1 646943 D 311402 CDS YP_002548542.1 222147585 7386261 648282..649733 1 NC_011989.1 a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation; chemotaxis protein 649733 7386261 Avi_0759 Agrobacterium vitis S4 chemotaxis protein YP_002548542.1 648282 D 311402 CDS YP_002548543.1 222147586 7386262 649730..651589 1 NC_011989.1 chemotaxis motility protein 651589 7386262 Avi_0760 Agrobacterium vitis S4 chemotaxis motility protein YP_002548543.1 649730 D 311402 CDS YP_002548544.1 222147587 7386263 651555..652103 1 NC_011989.1 hypothetical protein 652103 7386263 Avi_0761 Agrobacterium vitis S4 hypothetical protein YP_002548544.1 651555 D 311402 CDS YP_002548545.1 222147588 7386264 652440..653111 1 NC_011989.1 transcriptional regulator 653111 7386264 Avi_0763 Agrobacterium vitis S4 transcriptional regulator YP_002548545.1 652440 D 311402 CDS YP_002548546.1 222147589 7386265 653242..654498 1 NC_011989.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 654498 flgE 7386265 flgE Agrobacterium vitis S4 flagellar hook protein FlgE YP_002548546.1 653242 D 311402 CDS YP_002548547.1 222147590 7386266 654523..655977 1 NC_011989.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 655977 flgK 7386266 flgK Agrobacterium vitis S4 flagellar hook-associated protein FlgK YP_002548547.1 654523 D 311402 CDS YP_002548548.1 222147591 7386267 655981..657048 1 NC_011989.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL 657048 flgL 7386267 flgL Agrobacterium vitis S4 flagellar hook-associated protein FlgL YP_002548548.1 655981 D 311402 CDS YP_002548549.1 222147592 7386268 657083..657430 1 NC_011989.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF 657430 flaF 7386268 flaF Agrobacterium vitis S4 flagellar biosynthesis regulatory protein FlaF YP_002548549.1 657083 D 311402 CDS YP_002548550.1 222147593 7386269 657427..657876 1 NC_011989.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 657876 flbT 7386269 flbT Agrobacterium vitis S4 flagellar biosynthesis repressor FlbT YP_002548550.1 657427 D 311402 CDS YP_002548551.1 222147594 7386270 657867..658322 1 NC_011989.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein 658322 flgD 7386270 flgD Agrobacterium vitis S4 flagellar basal body rod modification protein YP_002548551.1 657867 D 311402 CDS YP_002548552.1 222147595 7386271 658474..658740 1 NC_011989.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 658740 fliQ 7386271 fliQ Agrobacterium vitis S4 flagellar biosynthesis protein FliQ YP_002548552.1 658474 D 311402 CDS YP_002548553.1 222147596 7386272 658864..660954 1 NC_011989.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 660954 flhA 7386272 flhA Agrobacterium vitis S4 flagellar biosynthesis protein FlhA YP_002548553.1 658864 D 311402 CDS YP_002548554.1 222147597 7386273 660951..661703 1 NC_011989.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 661703 fliR 7386273 fliR Agrobacterium vitis S4 flagellar biosynthesis protein FliR YP_002548554.1 660951 D 311402 CDS YP_002548555.1 222147598 7386274 661767..662180 1 NC_011989.1 hypothetical protein 662180 7386274 Avi_0774 Agrobacterium vitis S4 hypothetical protein YP_002548555.1 661767 D 311402 CDS YP_002548556.1 222147599 7386275 662180..662812 1 NC_011989.1 hypothetical protein 662812 7386275 Avi_0776 Agrobacterium vitis S4 hypothetical protein YP_002548556.1 662180 D 311402 CDS YP_002548557.1 222147600 7386276 662987..663352 1 NC_011989.1 hypothetical protein 663352 7386276 Avi_0777 Agrobacterium vitis S4 hypothetical protein YP_002548557.1 662987 D 311402 CDS YP_002548558.1 222147601 7386277 663352..663882 1 NC_011989.1 hypothetical protein 663882 7386277 Avi_0778 Agrobacterium vitis S4 hypothetical protein YP_002548558.1 663352 D 311402 CDS YP_002548559.1 222147602 7386278 664230..665069 1 NC_011989.1 teichoic acid biosynthesis protein 665069 tagA 7386278 tagA Agrobacterium vitis S4 teichoic acid biosynthesis protein YP_002548559.1 664230 D 311402 CDS YP_002548560.1 222147603 7386279 665331..666122 1 NC_011989.1 methylenetetrahydrofolate dehydrogenase 666122 folD 7386279 folD Agrobacterium vitis S4 methylenetetrahydrofolate dehydrogenase YP_002548560.1 665331 D 311402 CDS YP_002548561.1 222147604 7386280 complement(666124..667152) 1 NC_011989.1 transcriptional regulator repressor 667152 aglR 7386280 aglR Agrobacterium vitis S4 transcriptional regulator repressor YP_002548561.1 666124 R 311402 CDS YP_002548562.1 222147605 7386281 667443..668801 1 NC_011989.1 ABC transporter substrate binding protein (alpha-glucoside) 668801 aglE 7386281 aglE Agrobacterium vitis S4 ABC transporter substrate binding protein (alpha-glucoside) YP_002548562.1 667443 D 311402 CDS YP_002548563.1 222147606 7386282 668865..669896 1 NC_011989.1 ABC transporter permease 669896 aglF 7386282 aglF Agrobacterium vitis S4 ABC transporter permease YP_002548563.1 668865 D 311402 CDS YP_002548564.1 222147607 7386283 669898..671043 1 NC_011989.1 ABC transporter permease 671043 aglG 7386283 aglG Agrobacterium vitis S4 ABC transporter permease YP_002548564.1 669898 D 311402 CDS YP_002548565.1 222147608 7386284 671120..672772 1 NC_011989.1 alpha-glucosidase 672772 aglA 7386284 aglA Agrobacterium vitis S4 alpha-glucosidase YP_002548565.1 671120 D 311402 CDS YP_002548566.1 222147609 7386285 672850..673938 1 NC_011989.1 ABC transporter 673938 aglK 7386285 aglK Agrobacterium vitis S4 ABC transporter YP_002548566.1 672850 D 311402 CDS YP_002548567.1 222147610 7386286 674077..674484 1 NC_011989.1 hypothetical protein 674484 7386286 Avi_0790 Agrobacterium vitis S4 hypothetical protein YP_002548567.1 674077 D 311402 CDS YP_002548568.1 222147611 7386287 675093..676478 1 NC_011989.1 hypothetical protein 676478 7386287 Avi_0791 Agrobacterium vitis S4 hypothetical protein YP_002548568.1 675093 D 311402 CDS YP_002548569.1 222147612 7386288 complement(676536..677933) 1 NC_011989.1 Na+/citrate symporter protein 677933 7386288 Avi_0792 Agrobacterium vitis S4 Na+/citrate symporter protein YP_002548569.1 676536 R 311402 CDS YP_002548570.1 222147613 7386289 complement(678187..680409) 1 NC_011989.1 methyl-accepting chemotaxis protein 680409 mcpA 7386289 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548570.1 678187 R 311402 CDS YP_002548571.1 222147614 7386290 complement(681257..683074) 1 NC_011989.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 683074 edd 7386290 edd Agrobacterium vitis S4 phosphogluconate dehydratase YP_002548571.1 681257 R 311402 CDS YP_002548572.1 222147615 7386291 complement(683218..683937) 1 NC_011989.1 6-phosphogluconolactonase 683937 pgl 7386291 pgl Agrobacterium vitis S4 6-phosphogluconolactonase YP_002548572.1 683218 R 311402 CDS YP_002548573.1 222147616 7386292 complement(683930..685399) 1 NC_011989.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 685399 zwf 7386292 zwf Agrobacterium vitis S4 glucose-6-phosphate 1-dehydrogenase YP_002548573.1 683930 R 311402 CDS YP_002548574.1 222147617 7386293 complement(685545..686828) 1 NC_011989.1 oxidoreductase 686828 ordL 7386293 ordL Agrobacterium vitis S4 oxidoreductase YP_002548574.1 685545 R 311402 CDS YP_002548575.1 222147618 7386294 complement(686899..688335) 1 NC_011989.1 glutamine synthetase 688335 glnA 7386294 glnA Agrobacterium vitis S4 glutamine synthetase YP_002548575.1 686899 R 311402 CDS YP_002548576.1 222147619 7386295 688464..689651 1 NC_011989.1 hypothetical protein 689651 7386295 Avi_0801 Agrobacterium vitis S4 hypothetical protein YP_002548576.1 688464 D 311402 CDS YP_002548577.1 222147620 7386296 690309..691214 1 NC_011989.1 LysR family transcriptional regulator 691214 7386296 Avi_0805 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548577.1 690309 D 311402 CDS YP_002548578.1 222147621 7386297 691473..694001 1 NC_011989.1 methyl-accepting chemotaxis protein 694001 mclA 7386297 mclA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548578.1 691473 D 311402 CDS YP_002548579.1 222147622 7386298 694467..694955 1 NC_011989.1 Phosphoserine phosphatase 694955 7386298 Avi_0808 Agrobacterium vitis S4 Phosphoserine phosphatase YP_002548579.1 694467 D 311402 CDS YP_002548580.1 222147623 7386299 695442..697097 1 NC_011989.1 ABC transporter ATPase 697097 7386299 Avi_0811 Agrobacterium vitis S4 ABC transporter ATPase YP_002548580.1 695442 D 311402 CDS YP_002548581.1 222147624 7386300 697369..698562 1 NC_011989.1 tetracycline resistance protein 698562 tetA 7386300 tetA Agrobacterium vitis S4 tetracycline resistance protein YP_002548581.1 697369 D 311402 CDS YP_002548582.1 222147625 7386301 complement(698605..698865) 1 NC_011989.1 hypothetical protein 698865 7386301 Avi_0814 Agrobacterium vitis S4 hypothetical protein YP_002548582.1 698605 R 311402 CDS YP_002548583.1 222147626 7386302 complement(699018..700307) 1 NC_011989.1 isocitrate lyase 700307 aceA 7386302 aceA Agrobacterium vitis S4 isocitrate lyase YP_002548583.1 699018 R 311402 CDS YP_002548584.1 222147627 7386303 700556..701965 1 NC_011989.1 transcriptional regulator 701965 7386303 Avi_0818 Agrobacterium vitis S4 transcriptional regulator YP_002548584.1 700556 D 311402 CDS YP_002548585.1 222147628 7386304 702088..703203 1 NC_011989.1 ABC transporter substrate binding protein (putrescine) 703203 potF 7386304 potF Agrobacterium vitis S4 ABC transporter substrate binding protein (putrescine) YP_002548585.1 702088 D 311402 CDS YP_002548586.1 222147629 7386305 703306..704454 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (putrescine) 704454 potG 7386305 potG Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (putrescine) YP_002548586.1 703306 D 311402 CDS YP_002548587.1 222147630 7386306 704528..705388 1 NC_011989.1 ABC transporter permease 705388 potB 7386306 potB Agrobacterium vitis S4 ABC transporter permease YP_002548587.1 704528 D 311402 CDS YP_002548588.1 222147631 7386307 705398..706213 1 NC_011989.1 ABC transporter permease 706213 7386307 Avi_0825 Agrobacterium vitis S4 ABC transporter permease YP_002548588.1 705398 D 311402 CDS YP_002548589.1 222147632 7386308 complement(706223..708178) 1 NC_011989.1 AsmA family protein 708178 7386308 Avi_0826 Agrobacterium vitis S4 AsmA family protein YP_002548589.1 706223 R 311402 CDS YP_002548590.1 222147633 7386309 complement(708276..712508) 1 NC_011989.1 two component sensor kinase 712508 pleC 7386309 pleC Agrobacterium vitis S4 two component sensor kinase YP_002548590.1 708276 R 311402 CDS YP_002548591.1 222147634 7386310 712743..713192 1 NC_011989.1 hypothetical protein 713192 7386310 Avi_0828 Agrobacterium vitis S4 hypothetical protein YP_002548591.1 712743 D 311402 CDS YP_002548592.1 222147635 7387998 complement(713498..714166) 1 NC_011989.1 urease accessory protein 714166 ureJ 7387998 ureJ Agrobacterium vitis S4 urease accessory protein YP_002548592.1 713498 R 311402 CDS YP_002548593.1 222147636 7386312 714409..715017 1 NC_011989.1 urease accessory protein 715017 ureJ 7386312 ureJ Agrobacterium vitis S4 urease accessory protein YP_002548593.1 714409 D 311402 CDS YP_002548594.1 222147637 7386313 715805..716425 1 NC_011989.1 ABC transporter substrate-binding protein 716425 7386313 Avi_0833 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002548594.1 715805 D 311402 CDS YP_002548595.1 222147638 7386314 complement(716420..716851) 1 NC_011989.1 hypothetical protein 716851 7386314 Avi_0834 Agrobacterium vitis S4 hypothetical protein YP_002548595.1 716420 R 311402 CDS YP_002548596.1 222147639 7386315 complement(716866..717747) 1 NC_011989.1 LysR family transcriptional regulator 717747 7386315 Avi_0835 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548596.1 716866 R 311402 CDS YP_002548597.1 222147640 7386316 717850..719346 1 NC_011989.1 methylmalonate-semialdehyde dehydrogenase 719346 mmsA 7386316 mmsA Agrobacterium vitis S4 methylmalonate-semialdehyde dehydrogenase YP_002548597.1 717850 D 311402 CDS YP_002548598.1 222147641 7386317 719709..720179 1 NC_011989.1 rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons; iron-responsive transcriptional regulator 720179 rirA 7386317 rirA Agrobacterium vitis S4 iron-responsive transcriptional regulator YP_002548598.1 719709 D 311402 CDS YP_002548599.1 222147642 7386318 720329..720874 1 NC_011989.1 gluconokinase 720874 gntK 7386318 gntK Agrobacterium vitis S4 gluconokinase YP_002548599.1 720329 D 311402 CDS YP_002548600.1 222147643 7386319 complement(720891..721628) 1 NC_011989.1 CDPdiacylglycerol diphosphatase 721628 7386319 Avi_0842 Agrobacterium vitis S4 CDPdiacylglycerol diphosphatase YP_002548600.1 720891 R 311402 CDS YP_002548601.1 222147644 7386320 complement(721737..722984) 1 NC_011989.1 D-amino acid dehydrogenase small subunit 722984 dadA 7386320 dadA Agrobacterium vitis S4 D-amino acid dehydrogenase small subunit YP_002548601.1 721737 R 311402 CDS YP_002548602.1 222147645 7386321 complement(723118..724242) 1 NC_011989.1 hypothetical protein 724242 7386321 Avi_0846 Agrobacterium vitis S4 hypothetical protein YP_002548602.1 723118 R 311402 CDS YP_002548603.1 222147646 7386322 724472..724870 1 NC_011989.1 hypothetical protein 724870 7386322 Avi_0847 Agrobacterium vitis S4 hypothetical protein YP_002548603.1 724472 D 311402 CDS YP_002548604.1 222147647 7386323 complement(724941..726278) 1 NC_011989.1 Two-component sensor histidine kinase 726278 7386323 Avi_0849 Agrobacterium vitis S4 Two-component sensor histidine kinase YP_002548604.1 724941 R 311402 CDS YP_002548605.1 222147648 7386324 complement(726307..726984) 1 NC_011989.1 two component response regulator 726984 7386324 Avi_0850 Agrobacterium vitis S4 two component response regulator YP_002548605.1 726307 R 311402 CDS YP_002548606.1 222147649 7386325 727483..729042 1 NC_011989.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 729042 mqo 7386325 mqo Agrobacterium vitis S4 malate:quinone oxidoreductase YP_002548606.1 727483 D 311402 CDS YP_002548607.1 222147650 7386326 729285..730562 1 NC_011989.1 NADH dehydrogenase 730562 ndh 7386326 ndh Agrobacterium vitis S4 NADH dehydrogenase YP_002548607.1 729285 D 311402 CDS YP_002548608.1 222147651 7386327 730644..730778 1 NC_011989.1 hypothetical protein 730778 7386327 Avi_0854 Agrobacterium vitis S4 hypothetical protein YP_002548608.1 730644 D 311402 CDS YP_002548609.1 222147652 7386328 complement(731021..731452) 1 NC_011989.1 hypothetical protein 731452 7386328 Avi_0855 Agrobacterium vitis S4 hypothetical protein YP_002548609.1 731021 R 311402 CDS YP_002548610.1 222147653 7388922 732159..733097 1 NC_011989.1 prophage lambdaBa02 DNA replication protein 733097 7388922 Avi_0857 Agrobacterium vitis S4 prophage lambdaBa02 DNA replication protein YP_002548610.1 732159 D 311402 CDS YP_002548611.1 222147654 7387675 733305..734531 1 NC_011989.1 phage lambdaBa02, DNA replication protein 734531 7387675 Avi_0858 Agrobacterium vitis S4 phage lambdaBa02, DNA replication protein YP_002548611.1 733305 D 311402 CDS YP_002548612.1 222147655 7387676 734925..735476 1 NC_011989.1 phage prohead protease, HK97 family 735476 7387676 Avi_0860 Agrobacterium vitis S4 phage prohead protease, HK97 family YP_002548612.1 734925 D 311402 CDS YP_002548613.1 222147656 7387677 735478..736689 1 NC_011989.1 phage phi-C31 gp36 major capsid-like protein 736689 7387677 Avi_0861 Agrobacterium vitis S4 phage phi-C31 gp36 major capsid-like protein YP_002548613.1 735478 D 311402 CDS YP_002548614.1 222147657 7387678 736724..737110 1 NC_011989.1 hypothetical protein 737110 7387678 Avi_0862 Agrobacterium vitis S4 hypothetical protein YP_002548614.1 736724 D 311402 CDS YP_002548615.1 222147658 7387679 737113..737475 1 NC_011989.1 Restriction endonuclease 737475 7387679 Avi_0864 Agrobacterium vitis S4 Restriction endonuclease YP_002548615.1 737113 D 311402 CDS YP_002548616.1 222147659 7387680 737472..737960 1 NC_011989.1 hypothetical protein 737960 7387680 Avi_0865 Agrobacterium vitis S4 hypothetical protein YP_002548616.1 737472 D 311402 CDS YP_002548617.1 222147660 7387681 737964..738434 1 NC_011989.1 hypothetical protein 738434 7387681 Avi_0866 Agrobacterium vitis S4 hypothetical protein YP_002548617.1 737964 D 311402 CDS YP_002548618.1 222147661 7387682 738431..738742 1 NC_011989.1 hypothetical protein 738742 7387682 Avi_0867 Agrobacterium vitis S4 hypothetical protein YP_002548618.1 738431 D 311402 CDS YP_002548619.1 222147662 7387683 738744..739661 1 NC_011989.1 hypothetical protein 739661 7387683 Avi_0868 Agrobacterium vitis S4 hypothetical protein YP_002548619.1 738744 D 311402 CDS YP_002548620.1 222147663 7387684 739658..739969 1 NC_011989.1 Bacteriophage head-tail adaptor protein 739969 7387684 Avi_0869 Agrobacterium vitis S4 Bacteriophage head-tail adaptor protein YP_002548620.1 739658 D 311402 CDS YP_002548621.1 222147664 7387685 739966..740403 1 NC_011989.1 Phage terminase 740403 7387685 Avi_0871 Agrobacterium vitis S4 Phage terminase YP_002548621.1 739966 D 311402 CDS YP_002548622.1 222147665 7387686 740384..741976 1 NC_011989.1 Phage terminase-like protein 741976 7387686 Avi_0872 Agrobacterium vitis S4 Phage terminase-like protein YP_002548622.1 740384 D 311402 CDS YP_002548623.1 222147666 7387687 741976..744081 1 NC_011989.1 Methyl-accepting chemotaxis protein 744081 7387687 Avi_0873 Agrobacterium vitis S4 Methyl-accepting chemotaxis protein YP_002548623.1 741976 D 311402 CDS YP_002548624.1 222147667 7387688 744081..744440 1 NC_011989.1 hypothetical protein 744440 7387688 Avi_0874 Agrobacterium vitis S4 hypothetical protein YP_002548624.1 744081 D 311402 CDS YP_002548625.1 222147668 7387689 744446..745375 1 NC_011989.1 hypothetical protein 745375 7387689 Avi_0876 Agrobacterium vitis S4 hypothetical protein YP_002548625.1 744446 D 311402 CDS YP_002548626.1 222147669 7387690 complement(745830..746129) 1 NC_011989.1 hypothetical protein 746129 7387690 Avi_0879 Agrobacterium vitis S4 hypothetical protein YP_002548626.1 745830 R 311402 CDS YP_002548627.1 222147670 7387691 complement(746206..746730) 1 NC_011989.1 hypothetical protein 746730 7387691 Avi_0880 Agrobacterium vitis S4 hypothetical protein YP_002548627.1 746206 R 311402 CDS YP_002548628.1 222147671 7387692 747050..747400 1 NC_011989.1 hypothetical protein 747400 7387692 Avi_0883 Agrobacterium vitis S4 hypothetical protein YP_002548628.1 747050 D 311402 CDS YP_002548629.1 222147672 7387693 748068..749117 1 NC_011989.1 phage-related integrase 749117 intD 7387693 intD Agrobacterium vitis S4 phage-related integrase YP_002548629.1 748068 D 311402 CDS YP_002548630.1 222147673 7387183 749556..751367 1 NC_011989.1 exopolyphosphatase 751367 ppx 7387183 ppx Agrobacterium vitis S4 exopolyphosphatase YP_002548630.1 749556 D 311402 CDS YP_002548631.1 222147674 7387695 751452..752237 1 NC_011989.1 cell division protein 752237 ftsJ 7387695 ftsJ Agrobacterium vitis S4 cell division protein YP_002548631.1 751452 D 311402 CDS YP_002548632.1 222147675 7387696 752249..752632 1 NC_011989.1 hypothetical protein 752632 7387696 Avi_0890 Agrobacterium vitis S4 hypothetical protein YP_002548632.1 752249 D 311402 CDS YP_002548633.1 222147676 7387697 complement(752660..753961) 1 NC_011989.1 GGDEF family protein 753961 7387697 Avi_0891 Agrobacterium vitis S4 GGDEF family protein YP_002548633.1 752660 R 311402 CDS YP_002548634.1 222147677 7387698 complement(754289..755953) 1 NC_011989.1 two component sensor kinase 755953 7387698 Avi_0893 Agrobacterium vitis S4 two component sensor kinase YP_002548634.1 754289 R 311402 CDS YP_002548635.1 222147678 7387699 756317..758170 1 NC_011989.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 758170 mutL 7387699 mutL Agrobacterium vitis S4 DNA mismatch repair protein YP_002548635.1 756317 D 311402 CDS YP_002548636.1 222147679 7387700 758287..758517 1 NC_011989.1 hypothetical protein 758517 7387700 Avi_0896 Agrobacterium vitis S4 hypothetical protein YP_002548636.1 758287 D 311402 CDS YP_002548637.1 222147680 7387701 complement(758535..759572) 1 NC_011989.1 tetraacyldisaccharide 4'-kinase 759572 lpxK 7387701 lpxK Agrobacterium vitis S4 tetraacyldisaccharide 4'-kinase YP_002548637.1 758535 R 311402 CDS YP_002548638.1 222147681 7387702 complement(759583..760323) 1 NC_011989.1 phosphatase 760323 7387702 Avi_0898 Agrobacterium vitis S4 phosphatase YP_002548638.1 759583 R 311402 CDS YP_002548639.1 222147682 7387703 complement(760320..761639) 1 NC_011989.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 761639 kdtA 7387703 kdtA Agrobacterium vitis S4 3-deoxy-D-manno-octulosonic-acid transferase YP_002548639.1 760320 R 311402 CDS YP_002548640.1 222147683 7387704 complement(761806..762042) 1 NC_011989.1 hypothetical protein 762042 7387704 Avi_0900 Agrobacterium vitis S4 hypothetical protein YP_002548640.1 761806 R 311402 CDS YP_002548641.1 222147684 7387705 complement(762157..762969) 1 NC_011989.1 inositol monophosphatase family protein 762969 7387705 Avi_0902 Agrobacterium vitis S4 inositol monophosphatase family protein YP_002548641.1 762157 R 311402 CDS YP_002548642.1 222147685 7387706 complement(763012..764358) 1 NC_011989.1 PmbA/TldD related protein 764358 7387706 Avi_0903 Agrobacterium vitis S4 PmbA/TldD related protein YP_002548642.1 763012 R 311402 CDS YP_002548643.1 222147686 7387707 764570..766396 1 NC_011989.1 glutathione-regulated potassium-efflux system protein 766396 kefB 7387707 kefB Agrobacterium vitis S4 glutathione-regulated potassium-efflux system protein YP_002548643.1 764570 D 311402 CDS YP_002548644.1 222147687 7387708 complement(766547..767425) 1 NC_011989.1 hypothetical protein 767425 7387708 Avi_0906 Agrobacterium vitis S4 hypothetical protein YP_002548644.1 766547 R 311402 CDS YP_002548645.1 222147688 7387709 complement(767595..768155) 1 NC_011989.1 hypothetical protein 768155 7387709 Avi_0907 Agrobacterium vitis S4 hypothetical protein YP_002548645.1 767595 R 311402 CDS YP_002548646.1 222147689 7387710 complement(768162..770276) 1 NC_011989.1 ribosomal large subunit pseudouridine synthase B 770276 rluB 7387710 rluB Agrobacterium vitis S4 ribosomal large subunit pseudouridine synthase B YP_002548646.1 768162 R 311402 CDS YP_002548647.1 222147690 7387711 770349..770798 1 NC_011989.1 cytidine and deoxycytidylate deaminase 770798 codA 7387711 codA Agrobacterium vitis S4 cytidine and deoxycytidylate deaminase YP_002548647.1 770349 D 311402 CDS YP_002548648.1 222147691 7387712 complement(770854..771735) 1 NC_011989.1 metallo-beta-lactamase superfamily protein 771735 7387712 Avi_0912 Agrobacterium vitis S4 metallo-beta-lactamase superfamily protein YP_002548648.1 770854 R 311402 CDS YP_002548649.1 222147692 7387713 772230..773651 1 NC_011989.1 MFS permease 773651 7387713 Avi_0914 Agrobacterium vitis S4 MFS permease YP_002548649.1 772230 D 311402 CDS YP_002548650.1 222147693 7387714 complement(773735..774268) 1 NC_011989.1 hypothetical protein 774268 7387714 Avi_0915 Agrobacterium vitis S4 hypothetical protein YP_002548650.1 773735 R 311402 CDS YP_002548651.1 222147694 7387715 complement(774518..775399) 1 NC_011989.1 calcium-binding protein regucalcin 775399 7387715 Avi_0916 Agrobacterium vitis S4 calcium-binding protein regucalcin YP_002548651.1 774518 R 311402 CDS YP_002548652.1 222147695 7387716 776222..776914 1 NC_011989.1 transcriptional regulator LuxR family 776914 avhR 7387716 avhR Agrobacterium vitis S4 transcriptional regulator LuxR family YP_002548652.1 776222 D 311402 CDS YP_002548653.1 222147696 7387717 777059..778255 1 NC_011989.1 ABC transporter ATPase 778255 nrt 7387717 nrt Agrobacterium vitis S4 ABC transporter ATPase YP_002548653.1 777059 D 311402 CDS YP_002548654.1 222147697 7387718 778842..780002 1 NC_011989.1 mrp protein 780002 7387718 Avi_0923 Agrobacterium vitis S4 mrp protein YP_002548654.1 778842 D 311402 CDS YP_002548655.1 222147698 7387719 780400..781341 1 NC_011989.1 magnesium/cobalt transport protein 781341 corA 7387719 corA Agrobacterium vitis S4 magnesium/cobalt transport protein YP_002548655.1 780400 D 311402 CDS YP_002548656.1 222147699 7387720 781357..783261 1 NC_011989.1 potassium uptake protein 783261 7387720 Avi_0927 Agrobacterium vitis S4 potassium uptake protein YP_002548656.1 781357 D 311402 CDS YP_002548657.1 222147700 7387721 783570..783917 1 NC_011989.1 ATP synthase subunit I 783917 atpI 7387721 atpI Agrobacterium vitis S4 ATP synthase subunit I YP_002548657.1 783570 D 311402 CDS YP_002548658.1 222147701 7387722 783994..784746 1 NC_011989.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 784746 atpB 7387722 atpB Agrobacterium vitis S4 F0F1 ATP synthase subunit A YP_002548658.1 783994 D 311402 CDS YP_002548659.1 222147702 7387723 784814..785041 1 NC_011989.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 785041 atpC 7387723 atpC Agrobacterium vitis S4 F0F1 ATP synthase subunit C YP_002548659.1 784814 D 311402 CDS YP_002548660.1 222147703 7387724 785121..785705 1 NC_011989.1 ATP synthase 785705 atpB 7387724 atpB Agrobacterium vitis S4 ATP synthase YP_002548660.1 785121 D 311402 CDS YP_002548661.1 222147704 7387725 785710..786195 1 NC_011989.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 786195 atpF 7387725 atpF Agrobacterium vitis S4 F0F1 ATP synthase subunit B YP_002548661.1 785710 D 311402 CDS YP_002548662.1 222147705 7387726 complement(786352..787191) 1 NC_011989.1 ribonuclease HII 787191 rnhB 7387726 rnhB Agrobacterium vitis S4 ribonuclease HII YP_002548662.1 786352 R 311402 CDS YP_002548663.1 222147706 7387727 complement(787590..788747) 1 NC_011989.1 hypothetical protein 788747 7387727 Avi_0937 Agrobacterium vitis S4 hypothetical protein YP_002548663.1 787590 R 311402 CDS YP_002548664.1 222147707 7387728 789018..789539 1 NC_011989.1 hypothetical protein 789539 7387728 Avi_0939 Agrobacterium vitis S4 hypothetical protein YP_002548664.1 789018 D 311402 CDS YP_002548665.1 222147708 7387729 complement(789619..790167) 1 NC_011989.1 molybdenum cofactor biosynthesis protein B 790167 moaB 7387729 moaB Agrobacterium vitis S4 molybdenum cofactor biosynthesis protein B YP_002548665.1 789619 R 311402 CDS YP_002548666.1 222147709 7387730 complement(790279..791151) 1 NC_011989.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 791151 ispE 7387730 ispE Agrobacterium vitis S4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002548666.1 790279 R 311402 CDS YP_002548667.1 222147710 7387731 complement(791199..793058) 1 NC_011989.1 hypothetical protein 793058 7387731 Avi_0942 Agrobacterium vitis S4 hypothetical protein YP_002548667.1 791199 R 311402 CDS YP_002548668.1 222147711 7387732 complement(793433..794449) 1 NC_011989.1 octaprenyl-diphosphate synthase 794449 ispB 7387732 ispB Agrobacterium vitis S4 octaprenyl-diphosphate synthase YP_002548668.1 793433 R 311402 CDS YP_002548669.1 222147712 7387733 794668..795006 1 NC_011989.1 hypothetical protein 795006 7387733 Avi_0944 Agrobacterium vitis S4 hypothetical protein YP_002548669.1 794668 D 311402 CDS YP_002548670.1 222147713 7387734 795098..795826 1 NC_011989.1 hypothetical protein 795826 7387734 Avi_0945 Agrobacterium vitis S4 hypothetical protein YP_002548670.1 795098 D 311402 CDS YP_002548671.1 222147714 7387735 795933..796799 1 NC_011989.1 proteinase sohB 796799 sohB 7387735 sohB Agrobacterium vitis S4 proteinase sohB YP_002548671.1 795933 D 311402 CDS YP_002548672.1 222147715 7387736 796899..797114 1 NC_011989.1 hypothetical protein 797114 7387736 Avi_0948 Agrobacterium vitis S4 hypothetical protein YP_002548672.1 796899 D 311402 CDS YP_002548673.1 222147716 7387737 797651..798655 1 NC_011989.1 Signal transduction histidine kinase 798655 7387737 Avi_0950 Agrobacterium vitis S4 Signal transduction histidine kinase YP_002548673.1 797651 D 311402 CDS YP_002548674.1 222147717 7387738 798766..799737 1 NC_011989.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 799737 glyQ 7387738 glyQ Agrobacterium vitis S4 glycyl-tRNA synthetase subunit alpha YP_002548674.1 798766 D 311402 CDS YP_002548675.1 222147718 7387739 800635..801906 1 NC_011989.1 3-phosphoshikimate 1-carboxyvinyltransferase 801906 aroA 7387739 aroA Agrobacterium vitis S4 3-phosphoshikimate 1-carboxyvinyltransferase YP_002548675.1 800635 D 311402 CDS YP_002548676.1 222147719 7387740 802014..804308 1 NC_011989.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 804308 glyS 7387740 glyS Agrobacterium vitis S4 glycyl-tRNA synthetase subunit beta YP_002548676.1 802014 D 311402 CDS YP_002548677.1 222147720 7387741 804326..804817 1 NC_011989.1 hypothetical protein 804817 7387741 Avi_0957 Agrobacterium vitis S4 hypothetical protein YP_002548677.1 804326 D 311402 CDS YP_002548678.1 222147721 7387742 complement(804871..806703) 1 NC_011989.1 methyl-accepting chemotaxis protein 806703 mcpA 7387742 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548678.1 804871 R 311402 CDS YP_002548679.1 222147722 7387743 complement(806913..807353) 1 NC_011989.1 hypothetical protein 807353 7387743 Avi_0959 Agrobacterium vitis S4 hypothetical protein YP_002548679.1 806913 R 311402 CDS YP_002548680.1 222147723 7387744 complement(807429..808709) 1 NC_011989.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 808709 purD 7387744 purD Agrobacterium vitis S4 phosphoribosylamine--glycine ligase YP_002548680.1 807429 R 311402 CDS YP_002548681.1 222147724 7387745 complement(808763..809830) 1 NC_011989.1 hypothetical protein 809830 7387745 Avi_0961 Agrobacterium vitis S4 hypothetical protein YP_002548681.1 808763 R 311402 CDS YP_002548682.1 222147725 7387746 810063..812375 1 NC_011989.1 hypothetical protein 812375 7387746 Avi_0962 Agrobacterium vitis S4 hypothetical protein YP_002548682.1 810063 D 311402 CDS YP_002548683.1 222147726 7387747 812610..813866 1 NC_011989.1 cyclopropane-fatty-acyl-phospholipid synthase 813866 cfa 7387747 cfa Agrobacterium vitis S4 cyclopropane-fatty-acyl-phospholipid synthase YP_002548683.1 812610 D 311402 CDS YP_002548684.1 222147727 7387748 813939..814892 1 NC_011989.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 814892 ubiA 7387748 ubiA Agrobacterium vitis S4 4-hydroxybenzoate polyprenyltransferase YP_002548684.1 813939 D 311402 CDS YP_002548685.1 222147728 7387749 814967..815242 1 NC_011989.1 hypothetical protein 815242 7387749 Avi_0966 Agrobacterium vitis S4 hypothetical protein YP_002548685.1 814967 D 311402 CDS YP_002548686.1 222147729 7387750 815239..816306 1 NC_011989.1 cation efflux system protein 816306 7387750 Avi_0967 Agrobacterium vitis S4 cation efflux system protein YP_002548686.1 815239 D 311402 CDS YP_002548687.1 222147730 7387751 complement(816428..817009) 1 NC_011989.1 hypothetical protein 817009 7387751 Avi_0968 Agrobacterium vitis S4 hypothetical protein YP_002548687.1 816428 R 311402 CDS YP_002548688.1 222147731 7387752 817616..819799 1 NC_011989.1 hypothetical protein 819799 7387752 Avi_0969 Agrobacterium vitis S4 hypothetical protein YP_002548688.1 817616 D 311402 CDS YP_002548689.1 222147732 7387753 819932..820750 1 NC_011989.1 molybdate ABC transporter substrate-binding protein 820750 modA 7387753 modA Agrobacterium vitis S4 molybdate ABC transporter substrate-binding protein YP_002548689.1 819932 D 311402 CDS YP_002548690.1 222147733 7387754 820782..821477 1 NC_011989.1 molybdate ABC transporter permease 821477 modB 7387754 modB Agrobacterium vitis S4 molybdate ABC transporter permease YP_002548690.1 820782 D 311402 CDS YP_002548691.1 222147734 7387755 821474..822571 1 NC_011989.1 molybdate ABC transporter ATP-binding protein 822571 modC 7387755 modC Agrobacterium vitis S4 molybdate ABC transporter ATP-binding protein YP_002548691.1 821474 D 311402 CDS YP_002548692.1 222147735 7387756 complement(822603..823001) 1 NC_011989.1 molybdenum-binding transcriptional repressor 823001 modE 7387756 modE Agrobacterium vitis S4 molybdenum-binding transcriptional repressor YP_002548692.1 822603 R 311402 CDS YP_002548693.1 222147736 7387077 complement(823001..824431) 1 NC_011989.1 FAD dependent oxidoreductase 824431 7387077 Avi_0975 Agrobacterium vitis S4 FAD dependent oxidoreductase YP_002548693.1 823001 R 311402 CDS YP_002548694.1 222147737 7387078 complement(824487..825458) 1 NC_011989.1 hypothetical protein 825458 7387078 Avi_0976 Agrobacterium vitis S4 hypothetical protein YP_002548694.1 824487 R 311402 CDS YP_002548695.1 222147738 7387079 825667..826737 1 NC_011989.1 GGDEF family protein 826737 7387079 Avi_0978 Agrobacterium vitis S4 GGDEF family protein YP_002548695.1 825667 D 311402 CDS YP_002548696.1 222147739 7387080 827614..829449 1 NC_011989.1 methyl-accepting chemotaxis protein 829449 mcpC 7387080 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548696.1 827614 D 311402 CDS YP_002548697.1 222147740 7387081 829915..831204 1 NC_011989.1 ring hydroxylating dioxygenase alpha-subunit 831204 7387081 Avi_0981 Agrobacterium vitis S4 ring hydroxylating dioxygenase alpha-subunit YP_002548697.1 829915 D 311402 CDS YP_002548698.1 222147741 7387082 831201..832289 1 NC_011989.1 ferredoxin I 832289 7387082 Avi_0982 Agrobacterium vitis S4 ferredoxin I YP_002548698.1 831201 D 311402 CDS YP_002548699.1 222147742 7387083 complement(832458..833063) 1 NC_011989.1 hypothetical protein 833063 7387083 Avi_0983 Agrobacterium vitis S4 hypothetical protein YP_002548699.1 832458 R 311402 CDS YP_002548700.1 222147743 7387084 833389..833847 1 NC_011989.1 hypothetical protein 833847 7387084 Avi_0984 Agrobacterium vitis S4 hypothetical protein YP_002548700.1 833389 D 311402 CDS YP_002548701.1 222147744 7387085 complement(833905..834900) 1 NC_011989.1 divalent cation transporter 834900 7387085 Avi_0985 Agrobacterium vitis S4 divalent cation transporter YP_002548701.1 833905 R 311402 CDS YP_002548702.1 222147745 7387086 835119..836894 1 NC_011989.1 acyl-CoA dehydrogenase 836894 mmgC 7387086 mmgC Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002548702.1 835119 D 311402 CDS YP_002548703.1 222147746 7387087 836898..837656 1 NC_011989.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 837656 7387087 Avi_0987 Agrobacterium vitis S4 enoyl-CoA hydratase YP_002548703.1 836898 D 311402 CDS YP_002548704.1 222147747 7387088 complement(837765..839852) 1 NC_011989.1 methyl-accepting chemotaxis protein 839852 mcpA 7387088 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548704.1 837765 R 311402 CDS YP_002548705.1 222147748 7387089 840527..840838 1 NC_011989.1 hypothetical protein 840838 7387089 Avi_0989 Agrobacterium vitis S4 hypothetical protein YP_002548705.1 840527 D 311402 CDS YP_002548706.1 222147749 7387090 complement(840841..842097) 1 NC_011989.1 23S rRNA (uracil-5-)-methyltransferase RumA 842097 rumA 7387090 rumA Agrobacterium vitis S4 23S rRNA (uracil-5-)-methyltransferase RumA YP_002548706.1 840841 R 311402 CDS YP_002548707.1 222147750 7387091 complement(842094..842885) 1 NC_011989.1 hemolysin A 842885 7387091 Avi_0992 Agrobacterium vitis S4 hemolysin A YP_002548707.1 842094 R 311402 CDS YP_002548708.1 222147751 7387092 complement(842941..843258) 1 NC_011989.1 hypothetical protein 843258 7387092 Avi_0993 Agrobacterium vitis S4 hypothetical protein YP_002548708.1 842941 R 311402 CDS YP_002548709.1 222147752 7387093 843382..845331 1 NC_011989.1 methyl-accepting chemotaxis protein 845331 mcpG 7387093 mcpG Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548709.1 843382 D 311402 CDS YP_002548710.1 222147753 7387094 846617..848560 1 NC_011989.1 methyl-accepting chemotaxis protein 848560 7387094 Avi_0996 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548710.1 846617 D 311402 CDS YP_002548711.1 222147754 7387095 complement(848685..850604) 1 NC_011989.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 850604 dxs 7387095 dxs Agrobacterium vitis S4 1-deoxy-D-xylulose-5-phosphate synthase YP_002548711.1 848685 R 311402 CDS YP_002548712.1 222147755 7387096 complement(850897..851148) 1 NC_011989.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 851148 xseB 7387096 xseB Agrobacterium vitis S4 exodeoxyribonuclease VII small subunit YP_002548712.1 850897 R 311402 CDS YP_002548713.1 222147756 7387097 complement(851151..852086) 1 NC_011989.1 deacetylase 852086 7387097 Avi_0999 Agrobacterium vitis S4 deacetylase YP_002548713.1 851151 R 311402 CDS YP_002548714.1 222147757 7387098 852170..852571 1 NC_011989.1 hypothetical protein 852571 7387098 Avi_1002 Agrobacterium vitis S4 hypothetical protein YP_002548714.1 852170 D 311402 CDS YP_002548715.1 222147758 7387099 complement(852574..853449) 1 NC_011989.1 aminoglycoside phosphotransferase 853449 kka 7387099 kka Agrobacterium vitis S4 aminoglycoside phosphotransferase YP_002548715.1 852574 R 311402 CDS YP_002548716.1 222147759 7387100 complement(853506..854069) 1 NC_011989.1 biotin synthesis BioY protein 854069 bioY 7387100 bioY Agrobacterium vitis S4 biotin synthesis BioY protein YP_002548716.1 853506 R 311402 CDS YP_002548717.1 222147760 7387101 complement(854083..854703) 1 NC_011989.1 ABC transporter permease 854703 7387101 Avi_1006 Agrobacterium vitis S4 ABC transporter permease YP_002548717.1 854083 R 311402 CDS YP_002548718.1 222147761 7387102 complement(854697..855377) 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (cobalt) 855377 7387102 Avi_1007 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (cobalt) YP_002548718.1 854697 R 311402 CDS YP_002548719.1 222147762 7387103 855514..856470 1 NC_011989.1 agmatinase 856470 speB 7387103 speB Agrobacterium vitis S4 agmatinase YP_002548719.1 855514 D 311402 CDS YP_002548720.1 222147763 7387104 856531..857724 1 NC_011989.1 hypothetical protein 857724 7387104 Avi_1010 Agrobacterium vitis S4 hypothetical protein YP_002548720.1 856531 D 311402 CDS YP_002548721.1 222147764 7387105 complement(857714..858172) 1 NC_011989.1 hypothetical protein 858172 7387105 Avi_1011 Agrobacterium vitis S4 hypothetical protein YP_002548721.1 857714 R 311402 CDS YP_002548722.1 222147765 7387106 complement(858275..858580) 1 NC_011989.1 hypothetical protein 858580 7387106 Avi_1012 Agrobacterium vitis S4 hypothetical protein YP_002548722.1 858275 R 311402 CDS YP_002548723.1 222147766 7387107 complement(858819..859397) 1 NC_011989.1 hypothetical protein 859397 7387107 Avi_1013 Agrobacterium vitis S4 hypothetical protein YP_002548723.1 858819 R 311402 CDS YP_002548724.1 222147767 7387108 complement(859487..860587) 1 NC_011989.1 34-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II 860587 ribA 7387108 ribA Agrobacterium vitis S4 34-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II YP_002548724.1 859487 R 311402 CDS YP_002548725.1 222147768 7387109 complement(860599..861693) 1 NC_011989.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 861693 aroC 7387109 aroC Agrobacterium vitis S4 chorismate synthase YP_002548725.1 860599 R 311402 CDS YP_002548726.1 222147769 7387110 complement(861836..864991) 1 NC_011989.1 GGDEF family protein 864991 7387110 Avi_1017 Agrobacterium vitis S4 GGDEF family protein YP_002548726.1 861836 R 311402 CDS YP_002548727.1 222147770 7387111 865678..865938 1 NC_011989.1 hypothetical protein 865938 7387111 Avi_1019 Agrobacterium vitis S4 hypothetical protein YP_002548727.1 865678 D 311402 CDS YP_002548728.1 222147771 7387112 complement(865949..866539) 1 NC_011989.1 phosphoglycerate mutase 866539 gpmB 7387112 gpmB Agrobacterium vitis S4 phosphoglycerate mutase YP_002548728.1 865949 R 311402 CDS YP_002548729.1 222147772 7387113 complement(866586..867464) 1 NC_011989.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 867464 fabI 7387113 fabI Agrobacterium vitis S4 enoyl-(acyl carrier protein) reductase YP_002548729.1 866586 R 311402 CDS YP_002548730.1 222147773 7387114 complement(867595..868884) 1 NC_011989.1 molecular chaperone DnaJ family 868884 dnaJ 7387114 dnaJ Agrobacterium vitis S4 molecular chaperone DnaJ family YP_002548730.1 867595 R 311402 CDS YP_002548731.1 222147774 7387115 complement(869273..869725) 1 NC_011989.1 hypothetical protein 869725 7387115 Avi_1024 Agrobacterium vitis S4 hypothetical protein YP_002548731.1 869273 R 311402 CDS YP_002548732.1 222147775 7387116 869788..870408 1 NC_011989.1 pyridoxamine 5'-phosphate oxidase 870408 pdxH 7387116 pdxH Agrobacterium vitis S4 pyridoxamine 5'-phosphate oxidase YP_002548732.1 869788 D 311402 CDS YP_002548733.1 222147776 7387117 complement(870437..871486) 1 NC_011989.1 hypothetical protein 871486 7387117 Avi_1027 Agrobacterium vitis S4 hypothetical protein YP_002548733.1 870437 R 311402 CDS YP_002548734.1 222147777 7387118 complement(871732..873186) 1 NC_011989.1 MFS permease 873186 7387118 Avi_1028 Agrobacterium vitis S4 MFS permease YP_002548734.1 871732 R 311402 CDS YP_002548735.1 222147778 7387119 873271..873756 1 NC_011989.1 redox-sensitive transcriptional activator SoxR 873756 soxR 7387119 soxR Agrobacterium vitis S4 redox-sensitive transcriptional activator SoxR YP_002548735.1 873271 D 311402 CDS YP_002548736.1 222147779 7387120 873937..875265 1 NC_011989.1 D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) 875265 7387120 Avi_1030 Agrobacterium vitis S4 D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) YP_002548736.1 873937 D 311402 CDS YP_002548737.1 222147780 7387121 875528..875857 1 NC_011989.1 hypothetical protein 875857 7387121 Avi_1032 Agrobacterium vitis S4 hypothetical protein YP_002548737.1 875528 D 311402 CDS YP_002548738.1 222147781 7387122 complement(875934..876698) 1 NC_011989.1 FirrV-1-B8 876698 7387122 Avi_1033 Agrobacterium vitis S4 FirrV-1-B8 YP_002548738.1 875934 R 311402 CDS YP_002548739.1 222147782 7387123 complement(876863..877516) 1 NC_011989.1 hydrolase 877516 7387123 Avi_1034 Agrobacterium vitis S4 hydrolase YP_002548739.1 876863 R 311402 CDS YP_002548740.1 222147783 7387124 complement(877523..877954) 1 NC_011989.1 hypothetical protein 877954 7387124 Avi_1035 Agrobacterium vitis S4 hypothetical protein YP_002548740.1 877523 R 311402 CDS YP_002548741.1 222147784 7387125 complement(877954..879369) 1 NC_011989.1 TldD 879369 tldD 7387125 tldD Agrobacterium vitis S4 TldD YP_002548741.1 877954 R 311402 CDS YP_002548742.1 222147785 7387126 complement(879463..880191) 1 NC_011989.1 invasion associated locus B 880191 ialB 7387126 ialB Agrobacterium vitis S4 invasion associated locus B YP_002548742.1 879463 R 311402 CDS YP_002548743.1 222147786 7387127 880584..881522 1 NC_011989.1 cytochrome c oxidase subunit II 881522 coxB 7387127 coxB Agrobacterium vitis S4 cytochrome c oxidase subunit II YP_002548743.1 880584 D 311402 CDS YP_002548744.1 222147787 7387128 881537..883216 1 NC_011989.1 cytochrome c oxidase subunit I 883216 ctaD 7387128 ctaD Agrobacterium vitis S4 cytochrome c oxidase subunit I YP_002548744.1 881537 D 311402 CDS YP_002548745.1 222147788 7387129 883269..884246 1 NC_011989.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 884246 cyoE 7387129 cyoE Agrobacterium vitis S4 protoheme IX farnesyltransferase YP_002548745.1 883269 D 311402 CDS YP_002548746.1 222147789 7387130 884246..884383 1 NC_011989.1 hypothetical protein 884383 7387130 Avi_1043 Agrobacterium vitis S4 hypothetical protein YP_002548746.1 884246 D 311402 CDS YP_002548747.1 222147790 7387131 884528..885145 1 NC_011989.1 cytochrome C oxidase assembly protein 885145 coxG 7387131 coxG Agrobacterium vitis S4 cytochrome C oxidase assembly protein YP_002548747.1 884528 D 311402 CDS YP_002548748.1 222147791 7387132 885336..886214 1 NC_011989.1 cytochrome c oxidase subunit III 886214 coxC 7387132 coxC Agrobacterium vitis S4 cytochrome c oxidase subunit III YP_002548748.1 885336 D 311402 CDS YP_002548749.1 222147792 7387133 886453..886833 1 NC_011989.1 hypothetical protein 886833 7387133 Avi_1046 Agrobacterium vitis S4 hypothetical protein YP_002548749.1 886453 D 311402 CDS YP_002548750.1 222147793 7387134 886835..887560 1 NC_011989.1 cytochrome oxidase complex biogenesis factor transmembrane protein 887560 7387134 Avi_1048 Agrobacterium vitis S4 cytochrome oxidase complex biogenesis factor transmembrane protein YP_002548750.1 886835 D 311402 CDS YP_002548751.1 222147794 7387135 887723..888094 1 NC_011989.1 hypothetical protein 888094 7387135 Avi_1051 Agrobacterium vitis S4 hypothetical protein YP_002548751.1 887723 D 311402 CDS YP_002548752.1 222147795 7387136 888097..889131 1 NC_011989.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 889131 ispH 7387136 ispH Agrobacterium vitis S4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_002548752.1 888097 D 311402 CDS YP_002548753.1 222147796 7387137 complement(889159..890046) 1 NC_011989.1 beta-lactamase class D 890046 7387137 Avi_1053 Agrobacterium vitis S4 beta-lactamase class D YP_002548753.1 889159 R 311402 CDS YP_002548754.1 222147797 7387138 complement(890102..891865) 1 NC_011989.1 hypothetical protein 891865 7387138 Avi_1054 Agrobacterium vitis S4 hypothetical protein YP_002548754.1 890102 R 311402 CDS YP_002548755.1 222147798 7387139 complement(891897..892499) 1 NC_011989.1 hypothetical protein 892499 7387139 Avi_1055 Agrobacterium vitis S4 hypothetical protein YP_002548755.1 891897 R 311402 CDS YP_002548756.1 222147799 7387140 complement(892566..893768) 1 NC_011989.1 aspartate aminotransferase A 893768 aatA 7387140 aatA Agrobacterium vitis S4 aspartate aminotransferase A YP_002548756.1 892566 R 311402 CDS YP_002548757.1 222147800 7387141 complement(893894..894364) 1 NC_011989.1 hypothetical protein 894364 7387141 Avi_1057 Agrobacterium vitis S4 hypothetical protein YP_002548757.1 893894 R 311402 CDS YP_002548758.1 222147801 7387142 894676..895641 1 NC_011989.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 895641 thrB 7387142 thrB Agrobacterium vitis S4 homoserine kinase YP_002548758.1 894676 D 311402 CDS YP_002548759.1 222147802 7387143 895638..896102 1 NC_011989.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 896102 rnhA 7387143 rnhA Agrobacterium vitis S4 ribonuclease H YP_002548759.1 895638 D 311402 CDS YP_002548760.1 222147803 7387144 896129..896437 1 NC_011989.1 hypothetical protein 896437 7387144 Avi_1061 Agrobacterium vitis S4 hypothetical protein YP_002548760.1 896129 D 311402 CDS YP_002548761.1 222147804 7387145 complement(896502..897398) 1 NC_011989.1 ABC transporter substrate-binding protein 897398 7387145 Avi_1062 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002548761.1 896502 R 311402 CDS YP_002548762.1 222147805 7387146 complement(897414..898286) 1 NC_011989.1 ABC transporter permease 898286 7387146 Avi_1063 Agrobacterium vitis S4 ABC transporter permease YP_002548762.1 897414 R 311402 CDS YP_002548763.1 222147806 7387147 complement(898283..899080) 1 NC_011989.1 ABC transporter ATPase 899080 7387147 Avi_1065 Agrobacterium vitis S4 ABC transporter ATPase YP_002548763.1 898283 R 311402 CDS YP_002548764.1 222147807 7387148 complement(899400..899885) 1 NC_011989.1 peroxiredoxin 899885 7387148 Avi_1067 Agrobacterium vitis S4 peroxiredoxin YP_002548764.1 899400 R 311402 CDS YP_002548765.1 222147808 7387149 complement(899956..900837) 1 NC_011989.1 hypothetical protein 900837 7387149 Avi_1068 Agrobacterium vitis S4 hypothetical protein YP_002548765.1 899956 R 311402 CDS YP_002548766.1 222147809 7387150 901079..901684 1 NC_011989.1 hypothetical protein 901684 7387150 Avi_1069 Agrobacterium vitis S4 hypothetical protein YP_002548766.1 901079 D 311402 CDS YP_002548767.1 222147810 7387151 complement(901685..902617) 1 NC_011989.1 hypothetical protein 902617 7387151 Avi_1070 Agrobacterium vitis S4 hypothetical protein YP_002548767.1 901685 R 311402 CDS YP_002548768.1 222147811 7387152 902767..903450 1 NC_011989.1 transcriptional regulator ArsR family 903450 7387152 Avi_1071 Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002548768.1 902767 D 311402 CDS YP_002548769.1 222147812 7387153 complement(903491..906448) 1 NC_011989.1 hypothetical protein 906448 7387153 Avi_1072 Agrobacterium vitis S4 hypothetical protein YP_002548769.1 903491 R 311402 CDS YP_002548770.1 222147813 7387154 complement(906445..907059) 1 NC_011989.1 ribosomal-protein (S5)-alanine N-acetyltransferase 907059 rimJ 7387154 rimJ Agrobacterium vitis S4 ribosomal-protein (S5)-alanine N-acetyltransferase YP_002548770.1 906445 R 311402 CDS YP_002548771.1 222147814 7387155 complement(907186..908490) 1 NC_011989.1 peptidase family M16 908490 7387155 Avi_1074 Agrobacterium vitis S4 peptidase family M16 YP_002548771.1 907186 R 311402 CDS YP_002548772.1 222147815 7387156 complement(908511..909818) 1 NC_011989.1 threonine synthase 909818 thrC 7387156 thrC Agrobacterium vitis S4 threonine synthase YP_002548772.1 908511 R 311402 CDS YP_002548773.1 222147816 7387157 910172..910843 1 NC_011989.1 hypothetical protein 910843 7387157 Avi_1078 Agrobacterium vitis S4 hypothetical protein YP_002548773.1 910172 D 311402 CDS YP_002548774.1 222147817 7387158 910891..911817 1 NC_011989.1 hypothetical protein 911817 7387158 Avi_1079 Agrobacterium vitis S4 hypothetical protein YP_002548774.1 910891 D 311402 CDS YP_002548775.1 222147818 7387159 complement(911855..912544) 1 NC_011989.1 hypothetical protein 912544 7387159 Avi_1080 Agrobacterium vitis S4 hypothetical protein YP_002548775.1 911855 R 311402 CDS YP_002548776.1 222147819 7389147 912699..913367 1 NC_011989.1 GntR family transcriptional regulator 913367 7389147 Avi_1081 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002548776.1 912699 D 311402 CDS YP_002548777.1 222147820 7386165 913473..913904 1 NC_011989.1 hypothetical protein 913904 7386165 Avi_1083 Agrobacterium vitis S4 hypothetical protein YP_002548777.1 913473 D 311402 CDS YP_002548778.1 222147821 7386166 914089..915222 1 NC_011989.1 cell cycle regulated site-specific DNA-methyltransferase 915222 ccrM 7386166 ccrM Agrobacterium vitis S4 cell cycle regulated site-specific DNA-methyltransferase YP_002548778.1 914089 D 311402 CDS YP_002548779.1 222147822 7386167 915517..917415 1 NC_011989.1 hypothetical protein 917415 7386167 Avi_1086 Agrobacterium vitis S4 hypothetical protein YP_002548779.1 915517 D 311402 CDS YP_002548780.1 222147823 7386168 917495..918103 1 NC_011989.1 hypothetical protein 918103 7386168 Avi_1087 Agrobacterium vitis S4 hypothetical protein YP_002548780.1 917495 D 311402 CDS YP_002548781.1 222147824 7386169 918129..919829 1 NC_011989.1 hypothetical protein 919829 7386169 Avi_1088 Agrobacterium vitis S4 hypothetical protein YP_002548781.1 918129 D 311402 CDS YP_002548782.1 222147825 7386170 complement(919866..920141) 1 NC_011989.1 hypothetical protein 920141 7386170 Avi_1089 Agrobacterium vitis S4 hypothetical protein YP_002548782.1 919866 R 311402 CDS YP_002548783.1 222147826 7386171 complement(920141..920749) 1 NC_011989.1 hydrolase 920749 7386171 Avi_1090 Agrobacterium vitis S4 hydrolase YP_002548783.1 920141 R 311402 CDS YP_002548784.1 222147827 7386172 complement(920753..921919) 1 NC_011989.1 A/G-specific adenine glycosylase 921919 mutY 7386172 mutY Agrobacterium vitis S4 A/G-specific adenine glycosylase YP_002548784.1 920753 R 311402 CDS YP_002548785.1 222147828 7386174 921992..922540 1 NC_011989.1 hypothetical protein 922540 7386174 Avi_1091 Agrobacterium vitis S4 hypothetical protein YP_002548785.1 921992 D 311402 CDS YP_002548786.1 222147829 7386173 922739..923422 1 NC_011989.1 hypothetical protein 923422 7386173 Avi_1093 Agrobacterium vitis S4 hypothetical protein YP_002548786.1 922739 D 311402 CDS YP_002548787.1 222147830 7386175 923756..927217 1 NC_011989.1 chromosome segregation protein 927217 smc 7386175 smc Agrobacterium vitis S4 chromosome segregation protein YP_002548787.1 923756 D 311402 CDS YP_002548788.1 222147831 7386176 927239..927580 1 NC_011989.1 hypothetical protein 927580 7386176 Avi_1096 Agrobacterium vitis S4 hypothetical protein YP_002548788.1 927239 D 311402 CDS YP_002548789.1 222147832 7386177 927668..928084 1 NC_011989.1 hypothetical protein 928084 7386177 Avi_1098 Agrobacterium vitis S4 hypothetical protein YP_002548789.1 927668 D 311402 CDS YP_002548790.1 222147833 7386178 928359..929621 1 NC_011989.1 MFS permease 929621 7386178 Avi_1099 Agrobacterium vitis S4 MFS permease YP_002548790.1 928359 D 311402 CDS YP_002548791.1 222147834 7386179 complement(929673..930392) 1 NC_011989.1 hypothetical protein 930392 7386179 Avi_1100 Agrobacterium vitis S4 hypothetical protein YP_002548791.1 929673 R 311402 CDS YP_002548792.1 222147835 7386180 complement(930410..930913) 1 NC_011989.1 hypothetical protein 930913 7386180 Avi_1101 Agrobacterium vitis S4 hypothetical protein YP_002548792.1 930410 R 311402 CDS YP_002548793.1 222147836 7386181 931448..934132 1 NC_011989.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 934132 ppdK 7386181 ppdK Agrobacterium vitis S4 pyruvate phosphate dikinase YP_002548793.1 931448 D 311402 CDS YP_002548794.1 222147837 7386182 934298..935749 1 NC_011989.1 hypothetical protein 935749 7386182 Avi_1104 Agrobacterium vitis S4 hypothetical protein YP_002548794.1 934298 D 311402 CDS YP_002548795.1 222147838 7386183 935847..936890 1 NC_011989.1 hypothetical protein 936890 7386183 Avi_1105 Agrobacterium vitis S4 hypothetical protein YP_002548795.1 935847 D 311402 CDS YP_002548796.1 222147839 7386184 complement(936897..937817) 1 NC_011989.1 LysR family transcriptional regulator 937817 7386184 Avi_1106 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548796.1 936897 R 311402 CDS YP_002548797.1 222147840 7386185 937962..938720 1 NC_011989.1 hypothetical protein 938720 7386185 Avi_1108 Agrobacterium vitis S4 hypothetical protein YP_002548797.1 937962 D 311402 CDS YP_002548798.1 222147841 7386186 938781..939410 1 NC_011989.1 RhtB family transporter 939410 rhtB 7386186 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002548798.1 938781 D 311402 CDS YP_002548799.1 222147842 7386187 939407..940078 1 NC_011989.1 catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; phosphoserine phosphatase 940078 thrH 7386187 thrH Agrobacterium vitis S4 phosphoserine phosphatase YP_002548799.1 939407 D 311402 CDS YP_002548800.1 222147843 7386188 complement(940216..941604) 1 NC_011989.1 bacteriocin ABC transporter permease 941604 rspE 7386188 rspE Agrobacterium vitis S4 bacteriocin ABC transporter permease YP_002548800.1 940216 R 311402 CDS YP_002548801.1 222147844 7386189 complement(941615..943411) 1 NC_011989.1 rhiziobicin secretion 943411 prsD 7386189 prsD Agrobacterium vitis S4 rhiziobicin secretion YP_002548801.1 941615 R 311402 CDS YP_002548802.1 222147845 7387182 944270..944686 1 NC_011989.1 hypothetical protein 944686 7387182 Avi_1115 Agrobacterium vitis S4 hypothetical protein YP_002548802.1 944270 D 311402 CDS YP_002548803.1 222147846 7386191 945192..947165 1 NC_011989.1 methyl-accepting chemotaxis protein 947165 mcpA 7386191 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548803.1 945192 D 311402 CDS YP_002548804.1 222147847 7386192 947609..948358 1 NC_011989.1 phosphoadenosine phosphosulfate reductase 948358 cysH 7386192 cysH Agrobacterium vitis S4 phosphoadenosine phosphosulfate reductase YP_002548804.1 947609 D 311402 CDS YP_002548805.1 222147848 7386193 948522..949472 1 NC_011989.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase 949472 cysD 7386193 cysD Agrobacterium vitis S4 sulfate adenylyltransferase YP_002548805.1 948522 D 311402 CDS YP_002548806.1 222147849 7386194 949474..951012 1 NC_011989.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase 951012 cysN 7386194 cysN Agrobacterium vitis S4 sulfate adenylyltransferase YP_002548806.1 949474 D 311402 CDS YP_002548807.1 222147850 7386195 complement(951185..952174) 1 NC_011989.1 amidohydrolase 952174 7386195 Avi_1123 Agrobacterium vitis S4 amidohydrolase YP_002548807.1 951185 R 311402 CDS YP_002548808.1 222147851 7386196 complement(952540..953571) 1 NC_011989.1 LacI family transcriptional regulator 953571 cytR 7386196 cytR Agrobacterium vitis S4 LacI family transcriptional regulator YP_002548808.1 952540 R 311402 CDS YP_002548809.1 222147852 7386197 954444..955343 1 NC_011989.1 hypothetical protein 955343 7386197 Avi_1126 Agrobacterium vitis S4 hypothetical protein YP_002548809.1 954444 D 311402 CDS YP_002548810.1 222147853 7386198 complement(955384..956241) 1 NC_011989.1 metallo-beta-lactamase superfamily protein 956241 7386198 Avi_1127 Agrobacterium vitis S4 metallo-beta-lactamase superfamily protein YP_002548810.1 955384 R 311402 CDS YP_002548811.1 222147854 7386199 complement(956364..956660) 1 NC_011989.1 hypothetical protein 956660 7386199 Avi_1128 Agrobacterium vitis S4 hypothetical protein YP_002548811.1 956364 R 311402 CDS YP_002548812.1 222147855 7386200 complement(956802..957362) 1 NC_011989.1 proteinase 957362 pfpI 7386200 pfpI Agrobacterium vitis S4 proteinase YP_002548812.1 956802 R 311402 CDS YP_002548813.1 222147856 7387999 958086..958952 1 NC_011989.1 hypothetical protein 958952 7387999 Avi_1133 Agrobacterium vitis S4 hypothetical protein YP_002548813.1 958086 D 311402 CDS YP_002548814.1 222147857 7386202 complement(958980..959390) 1 NC_011989.1 hypothetical protein 959390 7386202 Avi_1135 Agrobacterium vitis S4 hypothetical protein YP_002548814.1 958980 R 311402 CDS YP_002548815.1 222147858 7386203 complement(959381..960829) 1 NC_011989.1 hypothetical protein 960829 7386203 Avi_1136 Agrobacterium vitis S4 hypothetical protein YP_002548815.1 959381 R 311402 CDS YP_002548816.1 222147859 7386204 961465..962430 1 NC_011989.1 flagellin 962430 fla 7386204 fla Agrobacterium vitis S4 flagellin YP_002548816.1 961465 D 311402 CDS YP_002548817.1 222147860 7386205 complement(962434..963756) 1 NC_011989.1 chloride channel protein 963756 7386205 Avi_1139 Agrobacterium vitis S4 chloride channel protein YP_002548817.1 962434 R 311402 CDS YP_002548818.1 222147861 7386206 964066..965355 1 NC_011989.1 hypothetical protein 965355 7386206 Avi_1140 Agrobacterium vitis S4 hypothetical protein YP_002548818.1 964066 D 311402 CDS YP_002548819.1 222147862 7386207 965428..965640 1 NC_011989.1 hypothetical protein 965640 7386207 Avi_1141 Agrobacterium vitis S4 hypothetical protein YP_002548819.1 965428 D 311402 CDS YP_002548820.1 222147863 7386208 965634..965999 1 NC_011989.1 nucleic acid-binding protein 965999 7386208 Avi_1142 Agrobacterium vitis S4 nucleic acid-binding protein YP_002548820.1 965634 D 311402 CDS YP_002548821.1 222147864 7386209 complement(966004..967659) 1 NC_011989.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 967659 betA 7386209 betA Agrobacterium vitis S4 choline dehydrogenase YP_002548821.1 966004 R 311402 CDS YP_002548822.1 222147865 7386210 967743..968084 1 NC_011989.1 hypothetical protein 968084 7386210 Avi_1146 Agrobacterium vitis S4 hypothetical protein YP_002548822.1 967743 D 311402 CDS YP_002548823.1 222147866 7386211 complement(968092..969558) 1 NC_011989.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 969558 betB 7386211 betB Agrobacterium vitis S4 betaine aldehyde dehydrogenase YP_002548823.1 968092 R 311402 CDS YP_002548824.1 222147867 7386212 complement(969555..970196) 1 NC_011989.1 glutathione S-transferase 970196 7386212 Avi_1148 Agrobacterium vitis S4 glutathione S-transferase YP_002548824.1 969555 R 311402 CDS YP_002548825.1 222147868 7386213 complement(970199..971689) 1 NC_011989.1 choline sulfatase 971689 betC 7386213 betC Agrobacterium vitis S4 choline sulfatase YP_002548825.1 970199 R 311402 CDS YP_002548826.1 222147869 7386214 complement(971713..972261) 1 NC_011989.1 TetR family transcriptional regulator 972261 7386214 Avi_1151 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002548826.1 971713 R 311402 CDS YP_002548827.1 222147870 7386215 972549..974360 1 NC_011989.1 hypothetical protein 974360 7386215 Avi_1154 Agrobacterium vitis S4 hypothetical protein YP_002548827.1 972549 D 311402 CDS YP_002548828.1 222147871 7386216 975478..976647 1 NC_011989.1 quinone oxidoreductase 976647 qor 7386216 qor Agrobacterium vitis S4 quinone oxidoreductase YP_002548828.1 975478 D 311402 CDS YP_002548829.1 222147872 7386217 976771..977142 1 NC_011989.1 transposase 977142 7386217 Avi_1157 Agrobacterium vitis S4 transposase YP_002548829.1 976771 D 311402 CDS YP_002548830.1 222147873 7386218 977118..977534 1 NC_011989.1 transposase 977534 7386218 Avi_1158 Agrobacterium vitis S4 transposase YP_002548830.1 977118 D 311402 CDS YP_002548831.1 222147874 7386219 977756..979771 1 NC_011989.1 methyl-accepting chemotaxis protein 979771 mcpA 7386219 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548831.1 977756 D 311402 CDS YP_002548832.1 222147875 7386220 980307..982199 1 NC_011989.1 hypothetical protein 982199 7386220 Avi_1160 Agrobacterium vitis S4 hypothetical protein YP_002548832.1 980307 D 311402 CDS YP_002548833.1 222147876 7386221 982186..984099 1 NC_011989.1 hypothetical protein 984099 7386221 Avi_1161 Agrobacterium vitis S4 hypothetical protein YP_002548833.1 982186 D 311402 CDS YP_002548834.1 222147877 7386222 984228..986129 1 NC_011989.1 hypothetical protein 986129 7386222 Avi_1162 Agrobacterium vitis S4 hypothetical protein YP_002548834.1 984228 D 311402 CDS YP_002548835.1 222147878 7386223 986234..987241 1 NC_011989.1 hypothetical protein 987241 7386223 Avi_1163 Agrobacterium vitis S4 hypothetical protein YP_002548835.1 986234 D 311402 CDS YP_002548836.1 222147879 7386224 complement(987272..988027) 1 NC_011989.1 transcriptional regulator DeoR family 988027 7386224 Avi_1164 Agrobacterium vitis S4 transcriptional regulator DeoR family YP_002548836.1 987272 R 311402 CDS YP_002548837.1 222147880 7386225 988099..988500 1 NC_011989.1 hypothetical protein 988500 7386225 Avi_1165 Agrobacterium vitis S4 hypothetical protein YP_002548837.1 988099 D 311402 CDS YP_002548838.1 222147881 7386226 complement(989133..989762) 1 NC_011989.1 hypothetical protein 989762 7386226 Avi_1166 Agrobacterium vitis S4 hypothetical protein YP_002548838.1 989133 R 311402 CDS YP_002548839.1 222147882 7386227 complement(989874..991547) 1 NC_011989.1 hypothetical protein 991547 7386227 Avi_1167 Agrobacterium vitis S4 hypothetical protein YP_002548839.1 989874 R 311402 CDS YP_002548840.1 222147883 7386228 complement(991751..992251) 1 NC_011989.1 hypothetical protein 992251 7386228 Avi_1168 Agrobacterium vitis S4 hypothetical protein YP_002548840.1 991751 R 311402 CDS YP_002548841.1 222147884 7386229 complement(992255..992908) 1 NC_011989.1 glutathione S-transferase 992908 gst 7386229 gst Agrobacterium vitis S4 glutathione S-transferase YP_002548841.1 992255 R 311402 CDS YP_002548842.1 222147885 7386230 993269..993793 1 NC_011989.1 hypothetical protein 993793 7386230 Avi_1172 Agrobacterium vitis S4 hypothetical protein YP_002548842.1 993269 D 311402 CDS YP_002548843.1 222147886 7386231 complement(993932..995698) 1 NC_011989.1 gamma-glutamyltransferase 995698 ggt 7386231 ggt Agrobacterium vitis S4 gamma-glutamyltransferase YP_002548843.1 993932 R 311402 CDS YP_002548844.1 222147887 7386232 complement(995951..996409) 1 NC_011989.1 transcriptional regulator MarR family 996409 7386232 Avi_1175 Agrobacterium vitis S4 transcriptional regulator MarR family YP_002548844.1 995951 R 311402 CDS YP_002548845.1 222147888 7386233 996724..998286 1 NC_011989.1 MFS permease 998286 7386233 Avi_1177 Agrobacterium vitis S4 MFS permease YP_002548845.1 996724 D 311402 CDS YP_002548846.1 222147889 7386234 998308..999375 1 NC_011989.1 hypothetical protein 999375 7386234 Avi_1178 Agrobacterium vitis S4 hypothetical protein YP_002548846.1 998308 D 311402 CDS YP_002548847.1 222147890 7386235 complement(999404..1000036) 1 NC_011989.1 nitroreductase 1000036 7386235 Avi_1179 Agrobacterium vitis S4 nitroreductase YP_002548847.1 999404 R 311402 CDS YP_002548848.1 222147891 7386236 complement(1000202..1001092) 1 NC_011989.1 hypothetical protein 1001092 7386236 Avi_1180 Agrobacterium vitis S4 hypothetical protein YP_002548848.1 1000202 R 311402 CDS YP_002548849.1 222147892 7386237 complement(1001875..1002456) 1 NC_011989.1 hypothetical protein 1002456 7386237 Avi_1183 Agrobacterium vitis S4 hypothetical protein YP_002548849.1 1001875 R 311402 CDS YP_002548850.1 222147893 7386238 complement(1002515..1003069) 1 NC_011989.1 hypothetical protein 1003069 7386238 Avi_1184 Agrobacterium vitis S4 hypothetical protein YP_002548850.1 1002515 R 311402 CDS YP_002548851.1 222147894 7386239 1003348..1004112 1 NC_011989.1 hypothetical protein 1004112 7386239 Avi_1186 Agrobacterium vitis S4 hypothetical protein YP_002548851.1 1003348 D 311402 CDS YP_002548852.1 222147895 7386240 1004264..1005019 1 NC_011989.1 hypothetical protein 1005019 7386240 Avi_1187 Agrobacterium vitis S4 hypothetical protein YP_002548852.1 1004264 D 311402 CDS YP_002548853.1 222147896 7386241 complement(1005114..1005590) 1 NC_011989.1 transcriptional regulator MarR family 1005590 7386241 Avi_1189 Agrobacterium vitis S4 transcriptional regulator MarR family YP_002548853.1 1005114 R 311402 CDS YP_002548854.1 222147897 7386242 1005742..1006164 1 NC_011989.1 organic hydroperoxide resistance protein 1006164 7386242 Avi_1190 Agrobacterium vitis S4 organic hydroperoxide resistance protein YP_002548854.1 1005742 D 311402 CDS YP_002548855.1 222147898 7386243 complement(1006396..1007733) 1 NC_011989.1 MFS permease 1007733 setA 7386243 setA Agrobacterium vitis S4 MFS permease YP_002548855.1 1006396 R 311402 CDS YP_002548856.1 222147899 7386244 1007844..1009019 1 NC_011989.1 sensory transduction regulatory protein 1009019 7386244 Avi_1193 Agrobacterium vitis S4 sensory transduction regulatory protein YP_002548856.1 1007844 D 311402 CDS YP_002548857.1 222147900 7386245 1009190..1009582 1 NC_011989.1 Two component sensor kinase/response regulator hybrid protein 1009582 7386245 Avi_1195 Agrobacterium vitis S4 Two component sensor kinase/response regulator hybrid protein YP_002548857.1 1009190 D 311402 CDS YP_002548858.1 222147901 7386246 complement(1009575..1010108) 1 NC_011989.1 hypothetical protein 1010108 7386246 Avi_1197 Agrobacterium vitis S4 hypothetical protein YP_002548858.1 1009575 R 311402 CDS YP_002548859.1 222147902 7388505 complement(1010300..1010836) 1 NC_011989.1 pyrE protein 1010836 7388505 Avi_1199 Agrobacterium vitis S4 pyrE protein YP_002548859.1 1010300 R 311402 CDS YP_002548860.1 222147903 7387593 complement(1011002..1013188) 1 NC_011989.1 methyl-accepting chemotaxis protein 1013188 7387593 Avi_1200 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548860.1 1011002 R 311402 CDS YP_002548861.1 222147904 7387594 complement(1013397..1015583) 1 NC_011989.1 methyl-accepting chemotaxis protein 1015583 7387594 Avi_1201 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548861.1 1013397 R 311402 CDS YP_002548862.1 222147905 7387595 complement(1015794..1016183) 1 NC_011989.1 hypothetical protein 1016183 7387595 Avi_1202 Agrobacterium vitis S4 hypothetical protein YP_002548862.1 1015794 R 311402 CDS YP_002548863.1 222147906 7387596 1016473..1018056 1 NC_011989.1 hypothetical protein 1018056 7387596 Avi_1204 Agrobacterium vitis S4 hypothetical protein YP_002548863.1 1016473 D 311402 CDS YP_002548864.1 222147907 7387597 1018604..1019881 1 NC_011989.1 Integral membrane transporter protein 1019881 7387597 Avi_1205 Agrobacterium vitis S4 Integral membrane transporter protein YP_002548864.1 1018604 D 311402 CDS YP_002548865.1 222147908 7387598 1019915..1021318 1 NC_011989.1 pyruvate kinase 1021318 pykA 7387598 pykA Agrobacterium vitis S4 pyruvate kinase YP_002548865.1 1019915 D 311402 CDS YP_002548866.1 222147909 7387599 1021318..1022250 1 NC_011989.1 permease 1022250 7387599 Avi_1207 Agrobacterium vitis S4 permease YP_002548866.1 1021318 D 311402 CDS YP_002548867.1 222147910 7387600 complement(1022276..1024090) 1 NC_011989.1 methyl-accepting chemotaxis protein 1024090 mcpC 7387600 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548867.1 1022276 R 311402 CDS YP_002548868.1 222147911 7387601 1024432..1025304 1 NC_011989.1 undecaprenol kinase 1025304 7387601 Avi_1209 Agrobacterium vitis S4 undecaprenol kinase YP_002548868.1 1024432 D 311402 CDS YP_002548869.1 222147912 7387602 complement(1025330..1026115) 1 NC_011989.1 ABC transporter 1026115 7387602 Avi_1210 Agrobacterium vitis S4 ABC transporter YP_002548869.1 1025330 R 311402 CDS YP_002548870.1 222147913 7387603 complement(1026133..1027446) 1 NC_011989.1 xylose ABC transporter permease 1027446 xylH 7387603 xylH Agrobacterium vitis S4 xylose ABC transporter permease YP_002548870.1 1026133 R 311402 CDS YP_002548871.1 222147914 7387604 complement(1027898..1028938) 1 NC_011989.1 ABC transporter substrate binding protein (xylose) 1028938 xylF 7387604 xylF Agrobacterium vitis S4 ABC transporter substrate binding protein (xylose) YP_002548871.1 1027898 R 311402 CDS YP_002548872.1 222147915 7387605 1029338..1030540 1 NC_011989.1 transcriptional regulator 1030540 7387605 Avi_1214 Agrobacterium vitis S4 transcriptional regulator YP_002548872.1 1029338 D 311402 CDS YP_002548873.1 222147916 7387606 complement(1030572..1030934) 1 NC_011989.1 hypothetical protein 1030934 7387606 Avi_1215 Agrobacterium vitis S4 hypothetical protein YP_002548873.1 1030572 R 311402 CDS YP_002548874.1 222147917 7387607 complement(1031420..1031911) 1 NC_011989.1 hypothetical protein 1031911 7387607 Avi_1217 Agrobacterium vitis S4 hypothetical protein YP_002548874.1 1031420 R 311402 CDS YP_002548875.1 222147918 7387608 complement(1032105..1032860) 1 NC_011989.1 ABC transporter 1032860 7387608 Avi_1218 Agrobacterium vitis S4 ABC transporter YP_002548875.1 1032105 R 311402 CDS YP_002548876.1 222147919 7387609 complement(1032854..1033936) 1 NC_011989.1 Fe3+ ABC transporter permease 1033936 7387609 Avi_1219 Agrobacterium vitis S4 Fe3+ ABC transporter permease YP_002548876.1 1032854 R 311402 CDS YP_002548877.1 222147920 7387610 complement(1033933..1035084) 1 NC_011989.1 ABC transporter substrate binding protein (iron) 1035084 7387610 Avi_1220 Agrobacterium vitis S4 ABC transporter substrate binding protein (iron) YP_002548877.1 1033933 R 311402 CDS YP_002548878.1 222147921 7387611 complement(1035248..1036468) 1 NC_011989.1 ABC transporter substrate binding protein (iron) 1036468 7387611 Avi_1221 Agrobacterium vitis S4 ABC transporter substrate binding protein (iron) YP_002548878.1 1035248 R 311402 CDS YP_002548879.1 222147922 7387612 1036563..1037381 1 NC_011989.1 methyltransferase 1037381 7387612 Avi_1222 Agrobacterium vitis S4 methyltransferase YP_002548879.1 1036563 D 311402 CDS YP_002548880.1 222147923 7387613 1037535..1038449 1 NC_011989.1 LysR family transcriptional regulator 1038449 7387613 Avi_1223 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002548880.1 1037535 D 311402 CDS YP_002548881.1 222147924 7387614 complement(1038470..1039717) 1 NC_011989.1 MFS permease 1039717 7387614 Avi_1224 Agrobacterium vitis S4 MFS permease YP_002548881.1 1038470 R 311402 CDS YP_002548882.1 222147925 7387615 complement(1039707..1040855) 1 NC_011989.1 peptide synthetase 1040855 7387615 Avi_1225 Agrobacterium vitis S4 peptide synthetase YP_002548882.1 1039707 R 311402 CDS YP_002548883.1 222147926 7387616 1041338..1041787 1 NC_011989.1 acetyltransferase 1041787 7387616 Avi_1227 Agrobacterium vitis S4 acetyltransferase YP_002548883.1 1041338 D 311402 CDS YP_002548884.1 222147927 7387617 1042375..1042761 1 NC_011989.1 hypothetical protein 1042761 7387617 Avi_1231 Agrobacterium vitis S4 hypothetical protein YP_002548884.1 1042375 D 311402 CDS YP_002548885.1 222147928 7387618 1042733..1043035 1 NC_011989.1 transcriptional regulator protein 1043035 7387618 Avi_1232 Agrobacterium vitis S4 transcriptional regulator protein YP_002548885.1 1042733 D 311402 CDS YP_002548886.1 222147929 7387619 1043532..1044023 1 NC_011989.1 hypothetical protein 1044023 7387619 Avi_1233 Agrobacterium vitis S4 hypothetical protein YP_002548886.1 1043532 D 311402 CDS YP_002548887.1 222147930 7387620 complement(1044069..1044983) 1 NC_011989.1 hypothetical protein 1044983 7387620 Avi_1234 Agrobacterium vitis S4 hypothetical protein YP_002548887.1 1044069 R 311402 CDS YP_002548888.1 222147931 7387621 complement(1045054..1045527) 1 NC_011989.1 cytochrome C-556 1045527 7387621 Avi_1236 Agrobacterium vitis S4 cytochrome C-556 YP_002548888.1 1045054 R 311402 CDS YP_002548889.1 222147932 7387622 complement(1045701..1046561) 1 NC_011989.1 hypothetical protein 1046561 7387622 Avi_1238 Agrobacterium vitis S4 hypothetical protein YP_002548889.1 1045701 R 311402 CDS YP_002548890.1 222147933 7387623 1046666..1047181 1 NC_011989.1 acetyltransferase 1047181 7387623 Avi_1239 Agrobacterium vitis S4 acetyltransferase YP_002548890.1 1046666 D 311402 CDS YP_002548891.1 222147934 7387624 complement(1048194..1048814) 1 NC_011989.1 ACP phosphodiesterase 1048814 acpD 7387624 acpD Agrobacterium vitis S4 ACP phosphodiesterase YP_002548891.1 1048194 R 311402 CDS YP_002548892.1 222147935 7387625 1048855..1049334 1 NC_011989.1 hypothetical protein 1049334 7387625 Avi_1242 Agrobacterium vitis S4 hypothetical protein YP_002548892.1 1048855 D 311402 CDS YP_002548893.1 222147936 7387626 complement(1049321..1049773) 1 NC_011989.1 acetyltransferase 1049773 7387626 Avi_1244 Agrobacterium vitis S4 acetyltransferase YP_002548893.1 1049321 R 311402 CDS YP_002548894.1 222147937 7387987 complement(1049886..1050488) 1 NC_011989.1 superoxide dismutase 1050488 sodB 7387987 sodB Agrobacterium vitis S4 superoxide dismutase YP_002548894.1 1049886 R 311402 CDS YP_002548895.1 222147938 7387628 complement(1050752..1051105) 1 NC_011989.1 hypothetical protein 1051105 7387628 Avi_1247 Agrobacterium vitis S4 hypothetical protein YP_002548895.1 1050752 R 311402 CDS YP_002548896.1 222147939 7387629 1051251..1052051 1 NC_011989.1 hypothetical protein 1052051 7387629 Avi_1248 Agrobacterium vitis S4 hypothetical protein YP_002548896.1 1051251 D 311402 CDS YP_002548897.1 222147940 7387630 1052222..1053157 1 NC_011989.1 GGDEF family protein 1053157 7387630 Avi_1249 Agrobacterium vitis S4 GGDEF family protein YP_002548897.1 1052222 D 311402 CDS YP_002548898.1 222147941 7387631 complement(1053183..1054064) 1 NC_011989.1 aminotransferase 1054064 ilvE 7387631 ilvE Agrobacterium vitis S4 aminotransferase YP_002548898.1 1053183 R 311402 CDS YP_002548899.1 222147942 7387632 1054360..1056537 1 NC_011989.1 Polyphenol oxidase 1056537 7387632 Avi_1253 Agrobacterium vitis S4 Polyphenol oxidase YP_002548899.1 1054360 D 311402 CDS YP_002548900.1 222147943 7387633 1056968..1057282 1 NC_011989.1 hypothetical protein 1057282 7387633 Avi_1256 Agrobacterium vitis S4 hypothetical protein YP_002548900.1 1056968 D 311402 CDS YP_002548901.1 222147944 7387634 1057491..1057964 1 NC_011989.1 hypothetical protein 1057964 7387634 Avi_1257 Agrobacterium vitis S4 hypothetical protein YP_002548901.1 1057491 D 311402 CDS YP_002548902.1 222147945 7387635 complement(1058071..1060200) 1 NC_011989.1 protease II 1060200 ptrB 7387635 ptrB Agrobacterium vitis S4 protease II YP_002548902.1 1058071 R 311402 CDS YP_002548903.1 222147946 7387636 1060423..1060812 1 NC_011989.1 hypothetical protein 1060812 7387636 Avi_1259 Agrobacterium vitis S4 hypothetical protein YP_002548903.1 1060423 D 311402 CDS YP_002548904.1 222147947 7387637 complement(1060858..1061958) 1 NC_011989.1 hypothetical protein 1061958 7387637 Avi_1260 Agrobacterium vitis S4 hypothetical protein YP_002548904.1 1060858 R 311402 CDS YP_002548905.1 222147948 7387638 1062615..1064393 1 NC_011989.1 xanthan lyase 1064393 7387638 Avi_1261 Agrobacterium vitis S4 xanthan lyase YP_002548905.1 1062615 D 311402 CDS YP_002548906.1 222147949 7387639 1064557..1065336 1 NC_011989.1 hypothetical protein 1065336 7387639 Avi_1263 Agrobacterium vitis S4 hypothetical protein YP_002548906.1 1064557 D 311402 CDS YP_002548907.1 222147950 7387640 complement(1065340..1066224) 1 NC_011989.1 hypothetical protein 1066224 7387640 Avi_1264 Agrobacterium vitis S4 hypothetical protein YP_002548907.1 1065340 R 311402 CDS YP_002548908.1 222147951 7387641 1066481..1066891 1 NC_011989.1 hypothetical protein 1066891 7387641 Avi_1265 Agrobacterium vitis S4 hypothetical protein YP_002548908.1 1066481 D 311402 CDS YP_002548909.1 222147952 7387642 1066932..1067249 1 NC_011989.1 dnaK suppressor protein 1067249 dskA 7387642 dskA Agrobacterium vitis S4 dnaK suppressor protein YP_002548909.1 1066932 D 311402 CDS YP_002548910.1 222147953 7387643 complement(1067277..1067654) 1 NC_011989.1 hypothetical protein 1067654 7387643 Avi_1267 Agrobacterium vitis S4 hypothetical protein YP_002548910.1 1067277 R 311402 CDS YP_002548911.1 222147954 7387644 1068026..1068676 1 NC_011989.1 Hemolysin III 1068676 7387644 Avi_1271 Agrobacterium vitis S4 Hemolysin III YP_002548911.1 1068026 D 311402 CDS YP_002548912.1 222147955 7387645 complement(1068777..1069508) 1 NC_011989.1 cAMP-binding protein 1069508 7387645 Avi_1273 Agrobacterium vitis S4 cAMP-binding protein YP_002548912.1 1068777 R 311402 CDS YP_002548913.1 222147956 7387646 1070084..1070590 1 NC_011989.1 Phosphinothricin acetyltransferase 1070590 7387646 Avi_1274 Agrobacterium vitis S4 Phosphinothricin acetyltransferase YP_002548913.1 1070084 D 311402 CDS YP_002548914.1 222147957 7387647 complement(1070591..1071328) 1 NC_011989.1 hypothetical protein 1071328 7387647 Avi_1275 Agrobacterium vitis S4 hypothetical protein YP_002548914.1 1070591 R 311402 CDS YP_002548915.1 222147958 7387648 1071419..1072561 1 NC_011989.1 AraC family transcriptional regulator 1072561 7387648 Avi_1276 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002548915.1 1071419 D 311402 CDS YP_002548916.1 222147959 7387649 complement(1072804..1073235) 1 NC_011989.1 transcriptional regulator 1073235 ros 7387649 ros Agrobacterium vitis S4 transcriptional regulator YP_002548916.1 1072804 R 311402 CDS YP_002548917.1 222147960 7387650 complement(1073649..1074014) 1 NC_011989.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G 1074014 mnhG 7387650 mnhG Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit G YP_002548917.1 1073649 R 311402 CDS YP_002548918.1 222147961 7387651 complement(1074014..1074427) 1 NC_011989.1 Na+/H+ antiporter 1074427 mnhF 7387651 mnhF Agrobacterium vitis S4 Na+/H+ antiporter YP_002548918.1 1074014 R 311402 CDS YP_002548919.1 222147962 7387652 complement(1074439..1074912) 1 NC_011989.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 1074912 mnhE 7387652 mnhE Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit E YP_002548919.1 1074439 R 311402 CDS YP_002548920.1 222147963 7387653 complement(1074909..1076513) 1 NC_011989.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit D 1076513 mnhD 7387653 mnhD Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit D YP_002548920.1 1074909 R 311402 CDS YP_002548921.1 222147964 7387654 complement(1076564..1076941) 1 NC_011989.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 1076941 mnhC 7387654 mnhC Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit C YP_002548921.1 1076564 R 311402 CDS YP_002548922.1 222147965 7387655 complement(1076941..1077360) 1 NC_011989.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit B 1077360 mnhB 7387655 mnhB Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit B YP_002548922.1 1076941 R 311402 CDS YP_002548923.1 222147966 7387656 complement(1077357..1079735) 1 NC_011989.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 1079735 mnhA 7387656 mnhA Agrobacterium vitis S4 putative monovalent cation/H+ antiporter subunit A YP_002548923.1 1077357 R 311402 CDS YP_002548924.1 222147967 7387657 1080161..1080586 1 NC_011989.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1080586 7387657 Avi_1286 Agrobacterium vitis S4 methionine sulfoxide reductase B YP_002548924.1 1080161 D 311402 CDS YP_002548925.1 222147968 7387658 1080909..1081274 1 NC_011989.1 hypothetical protein 1081274 7387658 Avi_1287 Agrobacterium vitis S4 hypothetical protein YP_002548925.1 1080909 D 311402 CDS YP_002548926.1 222147969 7387659 1081258..1082109 1 NC_011989.1 hypothetical protein 1082109 7387659 Avi_1289 Agrobacterium vitis S4 hypothetical protein YP_002548926.1 1081258 D 311402 CDS YP_002548927.1 222147970 7387660 complement(1082194..1082856) 1 NC_011989.1 hypothetical protein 1082856 7387660 Avi_1291 Agrobacterium vitis S4 hypothetical protein YP_002548927.1 1082194 R 311402 CDS YP_002548928.1 222147971 7387661 1083647..1084864 1 NC_011989.1 efflux protein 1084864 7387661 Avi_1295 Agrobacterium vitis S4 efflux protein YP_002548928.1 1083647 D 311402 CDS YP_002548929.1 222147972 7387662 1084868..1086811 1 NC_011989.1 ABC transporter ATPase 1086811 7387662 Avi_1296 Agrobacterium vitis S4 ABC transporter ATPase YP_002548929.1 1084868 D 311402 CDS YP_002548930.1 222147973 7387663 complement(1086912..1088738) 1 NC_011989.1 acylase and diesterase 1088738 7387663 Avi_1297 Agrobacterium vitis S4 acylase and diesterase YP_002548930.1 1086912 R 311402 CDS YP_002548931.1 222147974 7387664 1088907..1089614 1 NC_011989.1 TetR family transcriptional regulator 1089614 7387664 Avi_1298 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002548931.1 1088907 D 311402 CDS YP_002548932.1 222147975 7387665 complement(1090098..1091606) 1 NC_011989.1 Growth regulating protein 1091606 7387665 Avi_1301 Agrobacterium vitis S4 Growth regulating protein YP_002548932.1 1090098 R 311402 CDS YP_002548933.1 222147976 7387666 complement(1092089..1092508) 1 NC_011989.1 hypothetical protein 1092508 7387666 Avi_1302 Agrobacterium vitis S4 hypothetical protein YP_002548933.1 1092089 R 311402 CDS YP_002548934.1 222147977 7387667 complement(1092633..1093097) 1 NC_011989.1 hypothetical protein 1093097 7387667 Avi_1303 Agrobacterium vitis S4 hypothetical protein YP_002548934.1 1092633 R 311402 CDS YP_002548935.1 222147978 7387668 1093529..1095328 1 NC_011989.1 two component sensor kinase 1095328 7387668 Avi_1305 Agrobacterium vitis S4 two component sensor kinase YP_002548935.1 1093529 D 311402 CDS YP_002548936.1 222147979 7387669 1095300..1096424 1 NC_011989.1 hypothetical protein 1096424 7387669 Avi_1306 Agrobacterium vitis S4 hypothetical protein YP_002548936.1 1095300 D 311402 CDS YP_002548937.1 222147980 7387670 complement(1096491..1097822) 1 NC_011989.1 hypothetical protein 1097822 7387670 Avi_1307 Agrobacterium vitis S4 hypothetical protein YP_002548937.1 1096491 R 311402 CDS YP_002548938.1 222147981 7387671 complement(1097824..1100934) 1 NC_011989.1 AcrB/AcrD/AcrF family protein 1100934 7387671 Avi_1308 Agrobacterium vitis S4 AcrB/AcrD/AcrF family protein YP_002548938.1 1097824 R 311402 CDS YP_002548939.1 222147982 7387672 complement(1100931..1102025) 1 NC_011989.1 efflux protein 1102025 7387672 Avi_1309 Agrobacterium vitis S4 efflux protein YP_002548939.1 1100931 R 311402 CDS YP_002548940.1 222147983 7387673 complement(1102027..1103100) 1 NC_011989.1 HlyD family secretion protein 1103100 7387673 Avi_1311 Agrobacterium vitis S4 HlyD family secretion protein YP_002548940.1 1102027 R 311402 CDS YP_002548941.1 222147984 7387674 1103274..1103915 1 NC_011989.1 TetR family transcriptional regulator 1103915 7387674 Avi_1313 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002548941.1 1103274 D 311402 CDS YP_002548942.1 222147985 7388923 1103974..1104330 1 NC_011989.1 hypothetical protein 1104330 7388923 Avi_1314 Agrobacterium vitis S4 hypothetical protein YP_002548942.1 1103974 D 311402 CDS YP_002548943.1 222147986 7389065 complement(1104402..1105448) 1 NC_011989.1 hypothetical protein 1105448 7389065 Avi_1315 Agrobacterium vitis S4 hypothetical protein YP_002548943.1 1104402 R 311402 CDS YP_002548944.1 222147987 7389066 1105862..1106062 1 NC_011989.1 hypothetical protein 1106062 7389066 Avi_1318 Agrobacterium vitis S4 hypothetical protein YP_002548944.1 1105862 D 311402 CDS YP_002548945.1 222147988 7389067 1106704..1107129 1 NC_011989.1 exopolysaccharide production repressor protein 1107129 7389067 Avi_1319 Agrobacterium vitis S4 exopolysaccharide production repressor protein YP_002548945.1 1106704 D 311402 CDS YP_002548946.1 222147989 7389068 complement(1107271..1108368) 1 NC_011989.1 transcriptional regulator 1108368 7389068 Avi_1320 Agrobacterium vitis S4 transcriptional regulator YP_002548946.1 1107271 R 311402 CDS YP_002548947.1 222147990 7389069 complement(1108596..1109147) 1 NC_011989.1 hypothetical protein 1109147 7389069 Avi_1321 Agrobacterium vitis S4 hypothetical protein YP_002548947.1 1108596 R 311402 CDS YP_002548948.1 222147991 7389070 complement(1109140..1109787) 1 NC_011989.1 hypothetical protein 1109787 7389070 Avi_1322 Agrobacterium vitis S4 hypothetical protein YP_002548948.1 1109140 R 311402 CDS YP_002548949.1 222147992 7389071 complement(1109837..1111960) 1 NC_011989.1 penicillin binding protein 1111960 7389071 Avi_1323 Agrobacterium vitis S4 penicillin binding protein YP_002548949.1 1109837 R 311402 CDS YP_002548950.1 222147993 7389072 1112202..1112681 1 NC_011989.1 hypothetical protein 1112681 7389072 Avi_1324 Agrobacterium vitis S4 hypothetical protein YP_002548950.1 1112202 D 311402 CDS YP_002548951.1 222147994 7389073 complement(1112920..1114017) 1 NC_011989.1 hypothetical protein 1114017 7389073 Avi_1325 Agrobacterium vitis S4 hypothetical protein YP_002548951.1 1112920 R 311402 CDS YP_002548952.1 222147995 7389075 1114516..1115568 1 NC_011989.1 hypothetical protein 1115568 7389075 Avi_1327 Agrobacterium vitis S4 hypothetical protein YP_002548952.1 1114516 D 311402 CDS YP_002548953.1 222147996 7389076 1115984..1116412 1 NC_011989.1 Cu(I)-responsive transcriptional regulator 1116412 cueR 7389076 cueR Agrobacterium vitis S4 Cu(I)-responsive transcriptional regulator YP_002548953.1 1115984 D 311402 CDS YP_002548954.1 222147997 7389077 1117080..1117622 1 NC_011989.1 hypothetical protein 1117622 7389077 Avi_1329 Agrobacterium vitis S4 hypothetical protein YP_002548954.1 1117080 D 311402 CDS YP_002548955.1 222147998 7389078 1117734..1119113 1 NC_011989.1 large terminase 1119113 7389078 Avi_1330 Agrobacterium vitis S4 large terminase YP_002548955.1 1117734 D 311402 CDS YP_002548956.1 222147999 7389079 1119497..1120105 1 NC_011989.1 hypothetical protein 1120105 7389079 Avi_1332 Agrobacterium vitis S4 hypothetical protein YP_002548956.1 1119497 D 311402 CDS YP_002548957.1 222148000 7389080 1120420..1121622 1 NC_011989.1 phage portal protein HK97 family 1121622 7389080 Avi_1334 Agrobacterium vitis S4 phage portal protein HK97 family YP_002548957.1 1120420 D 311402 CDS YP_002548958.1 222148001 7389081 1121812..1122129 1 NC_011989.1 hypothetical protein 1122129 7389081 Avi_1335 Agrobacterium vitis S4 hypothetical protein YP_002548958.1 1121812 D 311402 CDS YP_002548959.1 222148002 7389082 1122178..1122747 1 NC_011989.1 phage prohead protease HK97 family 1122747 7389082 Avi_1337 Agrobacterium vitis S4 phage prohead protease HK97 family YP_002548959.1 1122178 D 311402 CDS YP_002548960.1 222148003 7389083 1122759..1124021 1 NC_011989.1 phage major capsid protein HK97 family 1124021 7389083 Avi_1338 Agrobacterium vitis S4 phage major capsid protein HK97 family YP_002548960.1 1122759 D 311402 CDS YP_002548961.1 222148004 7389084 1124126..1124695 1 NC_011989.1 hypothetical protein 1124695 7389084 Avi_1339 Agrobacterium vitis S4 hypothetical protein YP_002548961.1 1124126 D 311402 CDS YP_002548962.1 222148005 7389085 1124710..1125033 1 NC_011989.1 hypothetical protein 1125033 7389085 Avi_1340 Agrobacterium vitis S4 hypothetical protein YP_002548962.1 1124710 D 311402 CDS YP_002548963.1 222148006 7389086 1125187..1125585 1 NC_011989.1 hypothetical protein 1125585 7389086 Avi_1343 Agrobacterium vitis S4 hypothetical protein YP_002548963.1 1125187 D 311402 CDS YP_002548964.1 222148007 7389087 complement(1125575..1126819) 1 NC_011989.1 MFS permease 1126819 7389087 Avi_1344 Agrobacterium vitis S4 MFS permease YP_002548964.1 1125575 R 311402 CDS YP_002548965.1 222148008 7389088 1127172..1127582 1 NC_011989.1 hypothetical protein 1127582 7389088 Avi_1345 Agrobacterium vitis S4 hypothetical protein YP_002548965.1 1127172 D 311402 CDS YP_002548966.1 222148009 7389089 1127579..1127998 1 NC_011989.1 hypothetical protein 1127998 7389089 Avi_1346 Agrobacterium vitis S4 hypothetical protein YP_002548966.1 1127579 D 311402 CDS YP_002548967.1 222148010 7389090 1128058..1128246 1 NC_011989.1 gene transfer agent (GTA) orfg10 1128246 7389090 Avi_1347 Agrobacterium vitis S4 gene transfer agent (GTA) orfg10 YP_002548967.1 1128058 D 311402 CDS YP_002548968.1 222148011 7389091 1128257..1128856 1 NC_011989.1 hypothetical protein 1128856 7389091 Avi_1349 Agrobacterium vitis S4 hypothetical protein YP_002548968.1 1128257 D 311402 CDS YP_002548969.1 222148012 7389092 1128866..1129501 1 NC_011989.1 hypothetical protein 1129501 7389092 Avi_1350 Agrobacterium vitis S4 hypothetical protein YP_002548969.1 1128866 D 311402 CDS YP_002548970.1 222148013 7389093 1129498..1130388 1 NC_011989.1 hypothetical protein 1130388 7389093 Avi_1351 Agrobacterium vitis S4 hypothetical protein YP_002548970.1 1129498 D 311402 CDS YP_002548971.1 222148014 7389094 1130363..1130731 1 NC_011989.1 hypothetical protein 1130731 7389094 Avi_1352 Agrobacterium vitis S4 hypothetical protein YP_002548971.1 1130363 D 311402 CDS YP_002548972.1 222148015 7389095 1130903..1134694 1 NC_011989.1 gene transfer agent (GTA) orfg15 1134694 7389095 Avi_1354 Agrobacterium vitis S4 gene transfer agent (GTA) orfg15 YP_002548972.1 1130903 D 311402 CDS YP_002548973.1 222148016 7389096 1134738..1134977 1 NC_011989.1 hypothetical protein 1134977 7389096 Avi_1355 Agrobacterium vitis S4 hypothetical protein YP_002548973.1 1134738 D 311402 CDS YP_002548974.1 222148017 7389097 1135157..1135525 1 NC_011989.1 hypothetical protein 1135525 7389097 Avi_1357 Agrobacterium vitis S4 hypothetical protein YP_002548974.1 1135157 D 311402 CDS YP_002548975.1 222148018 7389098 1135659..1136333 1 NC_011989.1 two component response regulator 1136333 phoP 7389098 phoP Agrobacterium vitis S4 two component response regulator YP_002548975.1 1135659 D 311402 CDS YP_002548976.1 222148019 7389099 1136334..1137749 1 NC_011989.1 two component sensor kinase 1137749 popQ 7389099 popQ Agrobacterium vitis S4 two component sensor kinase YP_002548976.1 1136334 D 311402 CDS YP_002548977.1 222148020 7389100 1137981..1138400 1 NC_011989.1 lipoic acid synthetase 1138400 lipA 7389100 lipA Agrobacterium vitis S4 lipoic acid synthetase YP_002548977.1 1137981 D 311402 CDS YP_002548978.1 222148021 7389101 1138638..1139786 1 NC_011989.1 cycH protein 1139786 cycH 7389101 cycH Agrobacterium vitis S4 cycH protein YP_002548978.1 1138638 D 311402 CDS YP_002548979.1 222148022 7389102 1139783..1140232 1 NC_011989.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 1140232 cycJ 7389102 cycJ Agrobacterium vitis S4 cytochrome c-type biogenesis protein CcmE YP_002548979.1 1139783 D 311402 CDS YP_002548980.1 222148023 7389103 1140229..1142232 1 NC_011989.1 cytochrome c-type biogenesis protein CcmF 1142232 ccmF 7389103 ccmF Agrobacterium vitis S4 cytochrome c-type biogenesis protein CcmF YP_002548980.1 1140229 D 311402 CDS YP_002548981.1 222148024 7389104 1142229..1142687 1 NC_011989.1 cycL protein 1142687 cycL 7389104 cycL Agrobacterium vitis S4 cycL protein YP_002548981.1 1142229 D 311402 CDS YP_002548982.1 222148025 7389105 1143352..1144827 1 NC_011989.1 serine protease DO-like protease 1144827 dop 7389105 dop Agrobacterium vitis S4 serine protease DO-like protease YP_002548982.1 1143352 D 311402 CDS YP_002548983.1 222148026 7389106 1144917..1145675 1 NC_011989.1 two component response regulator 1145675 ragA 7389106 ragA Agrobacterium vitis S4 two component response regulator YP_002548983.1 1144917 D 311402 CDS YP_002548984.1 222148027 7389107 1145685..1147091 1 NC_011989.1 two component sensor kinase 1147091 ragB 7389107 ragB Agrobacterium vitis S4 two component sensor kinase YP_002548984.1 1145685 D 311402 CDS YP_002548985.1 222148028 7389108 1147159..1150170 1 NC_011989.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1150170 glnE 7389108 glnE Agrobacterium vitis S4 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_002548985.1 1147159 D 311402 CDS YP_002548986.1 222148029 7389109 complement(1150143..1152515) 1 NC_011989.1 two component sensor kinase 1152515 pleC 7389109 pleC Agrobacterium vitis S4 two component sensor kinase YP_002548986.1 1150143 R 311402 CDS YP_002548987.1 222148030 7389110 complement(1152801..1155479) 1 NC_011989.1 aminopeptidase N 1155479 pepN 7389110 pepN Agrobacterium vitis S4 aminopeptidase N YP_002548987.1 1152801 R 311402 CDS YP_002548988.1 222148031 7389111 complement(1155804..1156916) 1 NC_011989.1 methyl-accepting chemotaxis protein 1156916 mcpA 7389111 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002548988.1 1155804 R 311402 CDS YP_002548989.1 222148032 7389112 1157341..1158294 1 NC_011989.1 permease 1158294 7389112 Avi_1379 Agrobacterium vitis S4 permease YP_002548989.1 1157341 D 311402 CDS YP_002548990.1 222148033 7389113 complement(1158306..1159538) 1 NC_011989.1 MFS permease 1159538 7389113 Avi_1380 Agrobacterium vitis S4 MFS permease YP_002548990.1 1158306 R 311402 CDS YP_002548991.1 222148034 7389114 1160177..1161106 1 NC_011989.1 hypothetical protein 1161106 7389114 Avi_1381 Agrobacterium vitis S4 hypothetical protein YP_002548991.1 1160177 D 311402 CDS YP_002548992.1 222148035 7389115 complement(1161708..1162616) 1 NC_011989.1 DNA polymerase 1162616 7389115 Avi_1384 Agrobacterium vitis S4 DNA polymerase YP_002548992.1 1161708 R 311402 CDS YP_002548993.1 222148036 7389116 complement(1162675..1163967) 1 NC_011989.1 molecular chaperone Hsp70 family 1163967 7389116 Avi_1385 Agrobacterium vitis S4 molecular chaperone Hsp70 family YP_002548993.1 1162675 R 311402 CDS YP_002548994.1 222148037 7389117 complement(1164202..1164405) 1 NC_011989.1 hypothetical protein 1164405 7389117 Avi_1387 Agrobacterium vitis S4 hypothetical protein YP_002548994.1 1164202 R 311402 CDS YP_002548995.1 222148038 7389118 complement(1164420..1167551) 1 NC_011989.1 AcrB/AcrD/AcrF family protein 1167551 7389118 Avi_1388 Agrobacterium vitis S4 AcrB/AcrD/AcrF family protein YP_002548995.1 1164420 R 311402 CDS YP_002548996.1 222148039 7389119 complement(1167548..1168855) 1 NC_011989.1 HlyD family secretion protein 1168855 7389119 Avi_1389 Agrobacterium vitis S4 HlyD family secretion protein YP_002548996.1 1167548 R 311402 CDS YP_002548997.1 222148040 7389120 complement(1169046..1169831) 1 NC_011989.1 NAD/NADP dependent oxidoreductase 1169831 7389120 Avi_1391 Agrobacterium vitis S4 NAD/NADP dependent oxidoreductase YP_002548997.1 1169046 R 311402 CDS YP_002548998.1 222148041 7389121 1170115..1171776 1 NC_011989.1 electrotransfer ubiquinone oxidoreductase 1171776 7389121 Avi_1392 Agrobacterium vitis S4 electrotransfer ubiquinone oxidoreductase YP_002548998.1 1170115 D 311402 CDS YP_002548999.1 222148042 7389122 1172247..1173350 1 NC_011989.1 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 1173350 7389122 Avi_1393 Agrobacterium vitis S4 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_002548999.1 1172247 D 311402 CDS YP_002549000.1 222148043 7389123 1173648..1174940 1 NC_011989.1 cyclopropane-fatty-acyl-phospholipid synthase 1174940 cfa 7389123 cfa Agrobacterium vitis S4 cyclopropane-fatty-acyl-phospholipid synthase YP_002549000.1 1173648 D 311402 CDS YP_002549001.1 222148044 7389124 complement(1174953..1175216) 1 NC_011989.1 hypothetical protein 1175216 7389124 Avi_1396 Agrobacterium vitis S4 hypothetical protein YP_002549001.1 1174953 R 311402 CDS YP_002549002.1 222148045 7389125 complement(1175298..1176167) 1 NC_011989.1 hypothetical protein 1176167 7389125 Avi_1397 Agrobacterium vitis S4 hypothetical protein YP_002549002.1 1175298 R 311402 CDS YP_002549003.1 222148046 7389126 complement(1176509..1177885) 1 NC_011989.1 magnesium transport protein 1177885 mgtE 7389126 mgtE Agrobacterium vitis S4 magnesium transport protein YP_002549003.1 1176509 R 311402 CDS YP_002549004.1 222148047 7389127 complement(1178385..1179467) 1 NC_011989.1 MFS permease 1179467 7389127 Avi_1399 Agrobacterium vitis S4 MFS permease YP_002549004.1 1178385 R 311402 CDS YP_002549005.1 222148048 7389128 1180059..1180913 1 NC_011989.1 hypothetical protein 1180913 7389128 Avi_1401 Agrobacterium vitis S4 hypothetical protein YP_002549005.1 1180059 D 311402 CDS YP_002549006.1 222148049 7389129 complement(1180977..1182581) 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 1182581 7389129 Avi_1402 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002549006.1 1180977 R 311402 CDS YP_002549007.1 222148050 7389130 complement(1182584..1183705) 1 NC_011989.1 peptide ABC transporter permease 1183705 7389130 Avi_1403 Agrobacterium vitis S4 peptide ABC transporter permease YP_002549007.1 1182584 R 311402 CDS YP_002549008.1 222148051 7389131 complement(1183698..1184621) 1 NC_011989.1 peptide ABC transporter permease 1184621 7389131 Avi_1404 Agrobacterium vitis S4 peptide ABC transporter permease YP_002549008.1 1183698 R 311402 CDS YP_002549009.1 222148052 7389132 complement(1184685..1186283) 1 NC_011989.1 ABC transporter substrate binding protein (oligopeptide) 1186283 7389132 Avi_1405 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002549009.1 1184685 R 311402 CDS YP_002549010.1 222148053 7389133 complement(1186588..1187943) 1 NC_011989.1 glutamine synthetase 1187943 glnA 7389133 glnA Agrobacterium vitis S4 glutamine synthetase YP_002549010.1 1186588 R 311402 CDS YP_002549011.1 222148054 7389134 1188069..1189439 1 NC_011989.1 putative aminotransferase 1189439 bioA 7389134 bioA Agrobacterium vitis S4 putative aminotransferase YP_002549011.1 1188069 D 311402 CDS YP_002549012.1 222148055 7389135 complement(1189447..1189734) 1 NC_011989.1 hypothetical protein 1189734 7389135 Avi_1408 Agrobacterium vitis S4 hypothetical protein YP_002549012.1 1189447 R 311402 CDS YP_002549013.1 222148056 7389136 complement(1189737..1190351) 1 NC_011989.1 transcriptional regulator protein 1190351 7389136 Avi_1409 Agrobacterium vitis S4 transcriptional regulator protein YP_002549013.1 1189737 R 311402 CDS YP_002549014.1 222148057 7389137 complement(1190444..1191970) 1 NC_011989.1 hypothetical protein 1191970 7389137 Avi_1410 Agrobacterium vitis S4 hypothetical protein YP_002549014.1 1190444 R 311402 CDS YP_002549015.1 222148058 7389138 complement(1191972..1192880) 1 NC_011989.1 glycosyltransferase transmembrane protein 1192880 7389138 Avi_1411 Agrobacterium vitis S4 glycosyltransferase transmembrane protein YP_002549015.1 1191972 R 311402 CDS YP_002549016.1 222148059 7389139 1193084..1194055 1 NC_011989.1 hypothetical protein 1194055 7389139 Avi_1413 Agrobacterium vitis S4 hypothetical protein YP_002549016.1 1193084 D 311402 CDS YP_002549017.1 222148060 7389140 complement(1194079..1195593) 1 NC_011989.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 1195593 amn 7389140 amn Agrobacterium vitis S4 AMP nucleosidase YP_002549017.1 1194079 R 311402 CDS YP_002549018.1 222148061 7389141 1196008..1196700 1 NC_011989.1 glutathione S-transferase 1196700 7389141 Avi_1416 Agrobacterium vitis S4 glutathione S-transferase YP_002549018.1 1196008 D 311402 CDS YP_002549019.1 222148062 7389142 complement(1196758..1197096) 1 NC_011989.1 hypothetical protein 1197096 7389142 Avi_1419 Agrobacterium vitis S4 hypothetical protein YP_002549019.1 1196758 R 311402 CDS YP_002549020.1 222148063 7389143 1197626..1197892 1 NC_011989.1 hypothetical protein 1197892 7389143 Avi_1420 Agrobacterium vitis S4 hypothetical protein YP_002549020.1 1197626 D 311402 CDS YP_002549021.1 222148064 7389144 complement(1198008..1199081) 1 NC_011989.1 catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate; histidinol-phosphate aminotransferase 1199081 hisC 7389144 hisC Agrobacterium vitis S4 histidinol-phosphate aminotransferase YP_002549021.1 1198008 R 311402 CDS YP_002549022.1 222148065 7389145 complement(1199278..1199691) 1 NC_011989.1 hypothetical protein 1199691 7389145 Avi_1424 Agrobacterium vitis S4 hypothetical protein YP_002549022.1 1199278 R 311402 CDS YP_002549023.1 222148066 7389146 complement(1199862..1200215) 1 NC_011989.1 hypothetical protein 1200215 7389146 Avi_1425 Agrobacterium vitis S4 hypothetical protein YP_002549023.1 1199862 R 311402 CDS YP_002549024.1 222148067 7386828 1200503..1201720 1 NC_011989.1 ferredoxin reductase 1201720 7386828 Avi_1426 Agrobacterium vitis S4 ferredoxin reductase YP_002549024.1 1200503 D 311402 CDS YP_002549025.1 222148068 7386412 complement(1202116..1203150) 1 NC_011989.1 outer membrane protein 1203150 7386412 Avi_1427 Agrobacterium vitis S4 outer membrane protein YP_002549025.1 1202116 R 311402 CDS YP_002549026.1 222148069 7386413 complement(1203287..1204333) 1 NC_011989.1 outer membrane protein 1204333 7386413 Avi_1428 Agrobacterium vitis S4 outer membrane protein YP_002549026.1 1203287 R 311402 CDS YP_002549027.1 222148070 7388000 complement(1205272..1206159) 1 NC_011989.1 hypothetical protein 1206159 7388000 Avi_1430 Agrobacterium vitis S4 hypothetical protein YP_002549027.1 1205272 R 311402 CDS YP_002549028.1 222148071 7386415 complement(1206202..1208331) 1 NC_011989.1 soluble lytic transglycosylase 1208331 7386415 Avi_1431 Agrobacterium vitis S4 soluble lytic transglycosylase YP_002549028.1 1206202 R 311402 CDS YP_002549029.1 222148072 7386416 1208519..1209403 1 NC_011989.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1209403 dapA 7386416 dapA Agrobacterium vitis S4 dihydrodipicolinate synthase YP_002549029.1 1208519 D 311402 CDS YP_002549030.1 222148073 7386417 1209556..1210032 1 NC_011989.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1210032 smpB 7386417 smpB Agrobacterium vitis S4 SsrA-binding protein YP_002549030.1 1209556 D 311402 CDS YP_002549031.1 222148074 7386418 complement(1210706..1211779) 1 NC_011989.1 methylated-DNA--protein- cysteinemethyltransferase 1211779 ada 7386418 ada Agrobacterium vitis S4 methylated-DNA--protein- cysteinemethyltransferase YP_002549031.1 1210706 R 311402 CDS YP_002549032.1 222148075 7386419 complement(1211890..1213404) 1 NC_011989.1 methyl-accepting chemotaxis protein 1213404 mcpV 7386419 mcpV Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002549032.1 1211890 R 311402 CDS YP_002549033.1 222148076 7386420 complement(1214057..1214635) 1 NC_011989.1 hypothetical protein 1214635 7386420 Avi_1440 Agrobacterium vitis S4 hypothetical protein YP_002549033.1 1214057 R 311402 CDS YP_002549034.1 222148077 7386421 1214947..1215345 1 NC_011989.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1215345 rpoZ 7386421 rpoZ Agrobacterium vitis S4 DNA-directed RNA polymerase subunit omega YP_002549034.1 1214947 D 311402 CDS YP_002549035.1 222148078 7386422 1215504..1217744 1 NC_011989.1 GTP pyrophosphohydrolases/synthetases RelA/SpoT family 1217744 7386422 Avi_1443 Agrobacterium vitis S4 GTP pyrophosphohydrolases/synthetases RelA/SpoT family YP_002549035.1 1215504 D 311402 CDS YP_002549036.1 222148079 7386423 1218046..1218198 1 NC_011989.1 hypothetical protein 1218198 7386423 Avi_1445 Agrobacterium vitis S4 hypothetical protein YP_002549036.1 1218046 D 311402 CDS YP_002549037.1 222148080 7386424 1218734..1219477 1 NC_011989.1 signal peptidase I 1219477 lepB 7386424 lepB Agrobacterium vitis S4 signal peptidase I YP_002549037.1 1218734 D 311402 CDS YP_002549038.1 222148081 7386425 1219474..1220193 1 NC_011989.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1220193 rnc 7386425 rnc Agrobacterium vitis S4 ribonuclease III YP_002549038.1 1219474 D 311402 CDS YP_002549039.1 222148082 7386426 1220204..1221187 1 NC_011989.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1221187 era 7386426 era Agrobacterium vitis S4 GTP-binding protein Era YP_002549039.1 1220204 D 311402 CDS YP_002549040.1 222148083 7386427 complement(1221200..1222408) 1 NC_011989.1 hypothetical protein 1222408 7386427 Avi_1451 Agrobacterium vitis S4 hypothetical protein YP_002549040.1 1221200 R 311402 CDS YP_002549041.1 222148084 7386428 1222547..1223341 1 NC_011989.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1223341 recO 7386428 recO Agrobacterium vitis S4 DNA repair protein RecO YP_002549041.1 1222547 D 311402 CDS YP_002549042.1 222148085 7386429 complement(1223260..1223529) 1 NC_011989.1 hypothetical protein 1223529 7386429 Avi_1453 Agrobacterium vitis S4 hypothetical protein YP_002549042.1 1223260 R 311402 CDS YP_002549043.1 222148086 7386430 complement(1224054..1224905) 1 NC_011989.1 hypothetical protein 1224905 7386430 Avi_1456 Agrobacterium vitis S4 hypothetical protein YP_002549043.1 1224054 R 311402 CDS YP_002549044.1 222148087 7386431 complement(1224910..1225611) 1 NC_011989.1 hypothetical protein 1225611 7386431 Avi_1457 Agrobacterium vitis S4 hypothetical protein YP_002549044.1 1224910 R 311402 CDS YP_002549045.1 222148088 7386432 1225915..1226535 1 NC_011989.1 hypothetical protein 1226535 7386432 Avi_1459 Agrobacterium vitis S4 hypothetical protein YP_002549045.1 1225915 D 311402 CDS YP_002549046.1 222148089 7386433 complement(1226751..1227287) 1 NC_011989.1 hypothetical protein 1227287 7386433 Avi_1460 Agrobacterium vitis S4 hypothetical protein YP_002549046.1 1226751 R 311402 CDS YP_002549047.1 222148090 7386434 complement(1227284..1227931) 1 NC_011989.1 hypothetical protein 1227931 7386434 Avi_1461 Agrobacterium vitis S4 hypothetical protein YP_002549047.1 1227284 R 311402 CDS YP_002549048.1 222148091 7386435 complement(1227933..1228772) 1 NC_011989.1 glycine cleavage system T protein aminomethyltransferase 1228772 gcvT 7386435 gcvT Agrobacterium vitis S4 glycine cleavage system T protein aminomethyltransferase YP_002549048.1 1227933 R 311402 CDS YP_002549049.1 222148092 7386436 complement(1228950..1229726) 1 NC_011989.1 hypothetical protein 1229726 7386436 Avi_1463 Agrobacterium vitis S4 hypothetical protein YP_002549049.1 1228950 R 311402 CDS YP_002549050.1 222148093 7386437 complement(1229744..1230001) 1 NC_011989.1 hypothetical protein 1230001 7386437 Avi_1464 Agrobacterium vitis S4 hypothetical protein YP_002549050.1 1229744 R 311402 CDS YP_002549051.1 222148094 7386438 complement(1230101..1230550) 1 NC_011989.1 hypothetical protein 1230550 7386438 Avi_1465 Agrobacterium vitis S4 hypothetical protein YP_002549051.1 1230101 R 311402 CDS YP_002549052.1 222148095 7386439 complement(1230605..1231045) 1 NC_011989.1 ADP-Ribose Pyrophosphatase 1231045 nudF 7386439 nudF Agrobacterium vitis S4 ADP-Ribose Pyrophosphatase YP_002549052.1 1230605 R 311402 CDS YP_002549053.1 222148096 7386440 1231136..1231891 1 NC_011989.1 hypothetical protein 1231891 7386440 Avi_1467 Agrobacterium vitis S4 hypothetical protein YP_002549053.1 1231136 D 311402 CDS YP_002549054.1 222148097 7386441 1231888..1232232 1 NC_011989.1 hypothetical protein 1232232 7386441 Avi_1469 Agrobacterium vitis S4 hypothetical protein YP_002549054.1 1231888 D 311402 CDS YP_002549055.1 222148098 7386442 complement(1232332..1233240) 1 NC_011989.1 phosphatidylserine synthase 1233240 pssA 7386442 pssA Agrobacterium vitis S4 phosphatidylserine synthase YP_002549055.1 1232332 R 311402 CDS YP_002549056.1 222148099 7386443 complement(1233278..1233976) 1 NC_011989.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1233976 psd 7386443 psd Agrobacterium vitis S4 phosphatidylserine decarboxylase YP_002549056.1 1233278 R 311402 CDS YP_002549057.1 222148100 7386444 complement(1234098..1235984) 1 NC_011989.1 ABC transporter ATPase 1235984 7386444 Avi_1472 Agrobacterium vitis S4 ABC transporter ATPase YP_002549057.1 1234098 R 311402 CDS YP_002549058.1 222148101 7386445 complement(1236163..1238154) 1 NC_011989.1 hypothetical protein 1238154 7386445 Avi_1474 Agrobacterium vitis S4 hypothetical protein YP_002549058.1 1236163 R 311402 CDS YP_002549059.1 222148102 7386446 1238503..1239123 1 NC_011989.1 hypothetical protein 1239123 7386446 Avi_1475 Agrobacterium vitis S4 hypothetical protein YP_002549059.1 1238503 D 311402 CDS YP_002549060.1 222148103 7386447 complement(1239112..1240035) 1 NC_011989.1 hypothetical protein 1240035 7386447 Avi_1476 Agrobacterium vitis S4 hypothetical protein YP_002549060.1 1239112 R 311402 CDS YP_002549061.1 222148104 7386448 complement(1240182..1241798) 1 NC_011989.1 putative alpha-isopropylmalate/homocitrate synthase family transferase 1241798 7386448 Avi_1477 Agrobacterium vitis S4 putative alpha-isopropylmalate/homocitrate synthase family transferase YP_002549061.1 1240182 R 311402 CDS YP_002549062.1 222148105 7386449 complement(1241822..1242787) 1 NC_011989.1 proline iminopeptidase 1242787 pip 7386449 pip Agrobacterium vitis S4 proline iminopeptidase YP_002549062.1 1241822 R 311402 CDS YP_002549063.1 222148106 7386450 complement(1242780..1243274) 1 NC_011989.1 hypothetical protein 1243274 7386450 Avi_1480 Agrobacterium vitis S4 hypothetical protein YP_002549063.1 1242780 R 311402 CDS YP_002549064.1 222148107 7386451 complement(1243271..1243738) 1 NC_011989.1 hypothetical protein 1243738 7386451 Avi_1482 Agrobacterium vitis S4 hypothetical protein YP_002549064.1 1243271 R 311402 CDS YP_002549065.1 222148108 7386452 complement(1243735..1244223) 1 NC_011989.1 hypothetical protein 1244223 7386452 Avi_1483 Agrobacterium vitis S4 hypothetical protein YP_002549065.1 1243735 R 311402 CDS YP_002549066.1 222148109 7386453 complement(1244227..1244652) 1 NC_011989.1 hypothetical protein 1244652 7386453 Avi_1484 Agrobacterium vitis S4 hypothetical protein YP_002549066.1 1244227 R 311402 CDS YP_002549067.1 222148110 7386454 complement(1244649..1244894) 1 NC_011989.1 SpoVT/AbrB family protein 1244894 7386454 Avi_1485 Agrobacterium vitis S4 SpoVT/AbrB family protein YP_002549067.1 1244649 R 311402 CDS YP_002549068.1 222148111 7386455 complement(1244985..1245374) 1 NC_011989.1 Lactoylglutathione lyase 1245374 7386455 Avi_1486 Agrobacterium vitis S4 Lactoylglutathione lyase YP_002549068.1 1244985 R 311402 CDS YP_002549069.1 222148112 7386456 complement(1245504..1247270) 1 NC_011989.1 cysteinyl-tRNA synthetase 1247270 cysS 7386456 cysS Agrobacterium vitis S4 cysteinyl-tRNA synthetase YP_002549069.1 1245504 R 311402 CDS YP_002549070.1 222148113 7386457 1247490..1249124 1 NC_011989.1 Polygalacturonase/Pectinase 1249124 peh 7386457 peh Agrobacterium vitis S4 Polygalacturonase/Pectinase YP_002549070.1 1247490 D 311402 CDS YP_002549071.1 222148114 7386458 1249308..1249871 1 NC_011989.1 dTDP-4-dehydrorhamnose 3,5-epimerase 1249871 rfbC 7386458 rfbC Agrobacterium vitis S4 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002549071.1 1249308 D 311402 CDS YP_002549072.1 222148115 7386459 1249926..1250984 1 NC_011989.1 dTDP-D-glucose-46-dehydratase 1250984 rffB 7386459 rffB Agrobacterium vitis S4 dTDP-D-glucose-46-dehydratase YP_002549072.1 1249926 D 311402 CDS YP_002549073.1 222148116 7386460 1250981..1251886 1 NC_011989.1 dTDP-4-dehydrorhamnose reductase 1251886 rfbD 7386460 rfbD Agrobacterium vitis S4 dTDP-4-dehydrorhamnose reductase YP_002549073.1 1250981 D 311402 CDS YP_002549074.1 222148117 7386461 1251964..1252827 1 NC_011989.1 glucose-1-phosphate thymidylyltransferase 1252827 7386461 Avi_1494 Agrobacterium vitis S4 glucose-1-phosphate thymidylyltransferase YP_002549074.1 1251964 D 311402 CDS YP_002549075.1 222148118 7386462 1253108..1255006 1 NC_011989.1 glycosyltransferase 1255006 7386462 Avi_1495 Agrobacterium vitis S4 glycosyltransferase YP_002549075.1 1253108 D 311402 CDS YP_002549076.1 222148119 7386463 1255003..1256085 1 NC_011989.1 glycosyl transferase group 1/2 family protein 1256085 7386463 Avi_1496 Agrobacterium vitis S4 glycosyl transferase group 1/2 family protein YP_002549076.1 1255003 D 311402 CDS YP_002549077.1 222148120 7386464 complement(1256142..1256882) 1 NC_011989.1 NAD/NADP dependent oxidoreductase 1256882 7386464 Avi_1497 Agrobacterium vitis S4 NAD/NADP dependent oxidoreductase YP_002549077.1 1256142 R 311402 CDS YP_002549078.1 222148121 7386465 complement(1256927..1258516) 1 NC_011989.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1258516 purF 7386465 purF Agrobacterium vitis S4 amidophosphoribosyltransferase YP_002549078.1 1256927 R 311402 CDS YP_002549079.1 222148122 7386466 complement(1258637..1259236) 1 NC_011989.1 colicin V production protein 1259236 cvpA 7386466 cvpA Agrobacterium vitis S4 colicin V production protein YP_002549079.1 1258637 R 311402 CDS YP_002549080.1 222148123 7386467 complement(1259427..1260743) 1 NC_011989.1 UDP-glucose 6-dehydrogenase 1260743 ugdH 7386467 ugdH Agrobacterium vitis S4 UDP-glucose 6-dehydrogenase YP_002549080.1 1259427 R 311402 CDS YP_002549081.1 222148124 7386468 complement(1260856..1261830) 1 NC_011989.1 UDP-glucose 4-epimerase 1261830 galE 7386468 galE Agrobacterium vitis S4 UDP-glucose 4-epimerase YP_002549081.1 1260856 R 311402 CDS YP_002549082.1 222148125 7386469 complement(1261827..1262822) 1 NC_011989.1 dTDP-glucose 4-6-dehydratase 1262822 7386469 Avi_1505 Agrobacterium vitis S4 dTDP-glucose 4-6-dehydratase YP_002549082.1 1261827 R 311402 CDS YP_002549083.1 222148126 7386470 complement(1262960..1264360) 1 NC_011989.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1264360 radA 7386470 radA Agrobacterium vitis S4 DNA repair protein RadA YP_002549083.1 1262960 R 311402 CDS YP_002549084.1 222148127 7386471 complement(1264488..1265651) 1 NC_011989.1 alanine racemase 1265651 alr 7386471 alr Agrobacterium vitis S4 alanine racemase YP_002549084.1 1264488 R 311402 CDS YP_002549085.1 222148128 7386472 1265738..1266592 1 NC_011989.1 AraC family transcriptional regulator 1266592 7386472 Avi_1509 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002549085.1 1265738 D 311402 CDS YP_002549086.1 222148129 7386473 complement(1266603..1267262) 1 NC_011989.1 ABC transporter permease 1267262 7386473 Avi_1510 Agrobacterium vitis S4 ABC transporter permease YP_002549086.1 1266603 R 311402 CDS YP_002549087.1 222148130 7386474 complement(1267259..1267930) 1 NC_011989.1 ABC transporter permease 1267930 7386474 Avi_1512 Agrobacterium vitis S4 ABC transporter permease YP_002549087.1 1267259 R 311402 CDS YP_002549088.1 222148131 7386475 complement(1268051..1268833) 1 NC_011989.1 amino acid ABC transporter substrate-binding protein 1268833 7386475 Avi_1513 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002549088.1 1268051 R 311402 CDS YP_002549089.1 222148132 7386476 complement(1268982..1270478) 1 NC_011989.1 unwinds double stranded DNA; replicative DNA helicase 1270478 dnaB 7386476 dnaB Agrobacterium vitis S4 replicative DNA helicase YP_002549089.1 1268982 R 311402 CDS YP_002549090.1 222148133 7386477 complement(1270732..1271307) 1 NC_011989.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1271307 rplI 7386477 rplI Agrobacterium vitis S4 50S ribosomal protein L9 YP_002549090.1 1270732 R 311402 CDS YP_002549091.1 222148134 7386478 complement(1271367..1272368) 1 NC_011989.1 hypothetical protein 1272368 7386478 Avi_1518 Agrobacterium vitis S4 hypothetical protein YP_002549091.1 1271367 R 311402 CDS YP_002549092.1 222148135 7386479 complement(1272514..1272762) 1 NC_011989.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1272762 rpsR 7386479 rpsR Agrobacterium vitis S4 30S ribosomal protein S18 YP_002549092.1 1272514 R 311402 CDS YP_002549093.1 222148136 7386480 complement(1272775..1273236) 1 NC_011989.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1273236 rpsF 7386480 rpsF Agrobacterium vitis S4 30S ribosomal protein S6 YP_002549093.1 1272775 R 311402 CDS YP_002549094.1 222148137 7386481 complement(1273881..1274936) 1 NC_011989.1 extracellular metalloprotease precursor protein 1274936 7386481 Avi_1523 Agrobacterium vitis S4 extracellular metalloprotease precursor protein YP_002549094.1 1273881 R 311402 CDS YP_002549095.1 222148138 7386482 complement(1275079..1275984) 1 NC_011989.1 rhizobiocin/RTX toxin 1275984 rzcA 7386482 rzcA Agrobacterium vitis S4 rhizobiocin/RTX toxin YP_002549095.1 1275079 R 311402 CDS YP_002549096.1 222148139 7386483 complement(1276153..1277196) 1 NC_011989.1 aldo/keto reductase 1277196 7386483 Avi_1526 Agrobacterium vitis S4 aldo/keto reductase YP_002549096.1 1276153 R 311402 CDS YP_002549097.1 222148140 7386484 1277403..1278347 1 NC_011989.1 malonyl CoA-acyl carrier protein transacylase 1278347 fabD 7386484 fabD Agrobacterium vitis S4 malonyl CoA-acyl carrier protein transacylase YP_002549097.1 1277403 D 311402 CDS YP_002549098.1 222148141 7386485 1278479..1279216 1 NC_011989.1 catalyzes the formation of 3-hydroxyacyl-ACP from 3-keto-acyl-ACP; in the rhizobia this protein interacts with NodF to allow for the synthesis of highly polyunsaturated fatty acids necessary for nodulation; 3-ketoacyl-ACP reductase 1279216 fabG 7386485 fabG Agrobacterium vitis S4 3-ketoacyl-ACP reductase YP_002549098.1 1278479 D 311402 CDS YP_002549099.1 222148142 7386486 1279512..1279748 1 NC_011989.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1279748 acpP 7386486 acpP Agrobacterium vitis S4 acyl carrier protein YP_002549099.1 1279512 D 311402 CDS YP_002549100.1 222148143 7386487 1279992..1281254 1 NC_011989.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1281254 fabF 7386487 fabF Agrobacterium vitis S4 3-oxoacyl-ACP synthase YP_002549100.1 1279992 D 311402 CDS YP_002549101.1 222148144 7386488 1281588..1282832 1 NC_011989.1 hypothetical protein 1282832 7386488 Avi_1532 Agrobacterium vitis S4 hypothetical protein YP_002549101.1 1281588 D 311402 CDS YP_002549102.1 222148145 7386489 1282888..1283778 1 NC_011989.1 hypothetical protein 1283778 7386489 Avi_1534 Agrobacterium vitis S4 hypothetical protein YP_002549102.1 1282888 D 311402 CDS YP_002549103.1 222148146 7386490 1283782..1284444 1 NC_011989.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1284444 gmk 7386490 gmk Agrobacterium vitis S4 guanylate kinase YP_002549103.1 1283782 D 311402 CDS YP_002549104.1 222148147 7386491 1284507..1285193 1 NC_011989.1 hypothetical protein 1285193 7386491 Avi_1536 Agrobacterium vitis S4 hypothetical protein YP_002549104.1 1284507 D 311402 CDS YP_002549105.1 222148148 7386492 complement(1285222..1286049) 1 NC_011989.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1286049 ksgA 7386492 ksgA Agrobacterium vitis S4 dimethyladenosine transferase YP_002549105.1 1285222 R 311402 CDS YP_002549106.1 222148149 7386493 complement(1286049..1287089) 1 NC_011989.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1287089 pdxA 7386493 pdxA Agrobacterium vitis S4 4-hydroxythreonine-4-phosphate dehydrogenase YP_002549106.1 1286049 R 311402 CDS YP_002549107.1 222148150 7386497 complement(1287098..1288045) 1 NC_011989.1 hypothetical protein 1288045 7386497 Avi_1539 Agrobacterium vitis S4 hypothetical protein YP_002549107.1 1287098 R 311402 CDS YP_002549108.1 222148151 7387354 complement(1288598..1290931) 1 NC_011989.1 organic solvent tolerance protein 1290931 ostA 7387354 ostA Agrobacterium vitis S4 organic solvent tolerance protein YP_002549108.1 1288598 R 311402 CDS YP_002549109.1 222148152 7387355 complement(1290931..1292019) 1 NC_011989.1 hypothetical protein 1292019 7387355 Avi_1542 Agrobacterium vitis S4 hypothetical protein YP_002549109.1 1290931 R 311402 CDS YP_002549110.1 222148153 7387356 complement(1292016..1293215) 1 NC_011989.1 hypothetical protein 1293215 7387356 Avi_1543 Agrobacterium vitis S4 hypothetical protein YP_002549110.1 1292016 R 311402 CDS YP_002549111.1 222148154 7387357 complement(1293327..1294262) 1 NC_011989.1 hypothetical protein 1294262 7387357 Avi_1544 Agrobacterium vitis S4 hypothetical protein YP_002549111.1 1293327 R 311402 CDS YP_002549112.1 222148155 7387358 1294503..1295996 1 NC_011989.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1295996 pepA 7387358 pepA Agrobacterium vitis S4 leucyl aminopeptidase YP_002549112.1 1294503 D 311402 CDS YP_002549113.1 222148156 7387359 1296011..1296460 1 NC_011989.1 hypothetical protein 1296460 7387359 Avi_1546 Agrobacterium vitis S4 hypothetical protein YP_002549113.1 1296011 D 311402 CDS YP_002549114.1 222148157 7387360 complement(1296606..1298513) 1 NC_011989.1 methyl-accepting chemotaxis protein 1298513 mcpA 7387360 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002549114.1 1296606 R 311402 CDS YP_002549115.1 222148158 7387361 complement(1299127..1301046) 1 NC_011989.1 ABC transporter ATPase 1301046 7387361 Avi_1549 Agrobacterium vitis S4 ABC transporter ATPase YP_002549115.1 1299127 R 311402 CDS YP_002549116.1 222148159 7387362 1301170..1301850 1 NC_011989.1 lignin degradation protein 1301850 ligE 7387362 ligE Agrobacterium vitis S4 lignin degradation protein YP_002549116.1 1301170 D 311402 CDS YP_002549117.1 222148160 7387363 1301981..1302379 1 NC_011989.1 nucleoside diphosphate kinase 1302379 ndk 7387363 ndk Agrobacterium vitis S4 nucleoside diphosphate kinase YP_002549117.1 1301981 D 311402 CDS YP_002549118.1 222148161 7387364 complement(1302547..1303005) 1 NC_011989.1 molybdopterin converting factor large subunit 1303005 moaE 7387364 moaE Agrobacterium vitis S4 molybdopterin converting factor large subunit YP_002549118.1 1302547 R 311402 CDS YP_002549119.1 222148162 7387365 complement(1303010..1303267) 1 NC_011989.1 molybdopterin converting factor subunit 1 1303267 7387365 Avi_1555 Agrobacterium vitis S4 molybdopterin converting factor subunit 1 YP_002549119.1 1303010 R 311402 CDS YP_002549120.1 222148163 7387366 complement(1303264..1303854) 1 NC_011989.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1303854 pgsA 7387366 pgsA Agrobacterium vitis S4 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002549120.1 1303264 R 311402 CDS YP_002549121.1 222148164 7387367 complement(1303967..1306039) 1 NC_011989.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1306039 uvrC 7387367 uvrC Agrobacterium vitis S4 excinuclease ABC subunit C YP_002549121.1 1303967 R 311402 CDS YP_002549122.1 222148165 7387368 complement(1306036..1306815) 1 NC_011989.1 dehydrogenase 1306815 7387368 Avi_1559 Agrobacterium vitis S4 dehydrogenase YP_002549122.1 1306036 R 311402 CDS YP_002549123.1 222148166 7387369 1307228..1307866 1 NC_011989.1 outer membrane protein 1307866 ropB 7387369 ropB Agrobacterium vitis S4 outer membrane protein YP_002549123.1 1307228 D 311402 CDS YP_002549124.1 222148167 7387370 complement(1307954..1308550) 1 NC_011989.1 glutathione S-transferase 1308550 7387370 Avi_1562 Agrobacterium vitis S4 glutathione S-transferase YP_002549124.1 1307954 R 311402 CDS YP_002549125.1 222148168 7387371 complement(1308583..1309434) 1 NC_011989.1 hypothetical protein 1309434 7387371 Avi_1564 Agrobacterium vitis S4 hypothetical protein YP_002549125.1 1308583 R 311402 CDS YP_002549126.1 222148169 7387372 1309510..1311624 1 NC_011989.1 reductase 1311624 7387372 Avi_1565 Agrobacterium vitis S4 reductase YP_002549126.1 1309510 D 311402 CDS YP_002549127.1 222148170 7387373 1311621..1312205 1 NC_011989.1 NTP pyrophosphohydrolase MutT family 1312205 7387373 Avi_1566 Agrobacterium vitis S4 NTP pyrophosphohydrolase MutT family YP_002549127.1 1311621 D 311402 CDS YP_002549128.1 222148171 7387374 1312321..1313640 1 NC_011989.1 metallo-beta-lactamase superfamily protein 1313640 7387374 Avi_1568 Agrobacterium vitis S4 metallo-beta-lactamase superfamily protein YP_002549128.1 1312321 D 311402 CDS YP_002549129.1 222148172 7387375 1313634..1313978 1 NC_011989.1 transcriptional regulator ArsR family 1313978 7387375 Avi_1569 Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002549129.1 1313634 D 311402 CDS YP_002549130.1 222148173 7387376 1313975..1314385 1 NC_011989.1 hypothetical protein 1314385 7387376 Avi_1570 Agrobacterium vitis S4 hypothetical protein YP_002549130.1 1313975 D 311402 CDS YP_002549131.1 222148174 7387377 1314382..1314816 1 NC_011989.1 hypothetical protein 1314816 7387377 Avi_1572 Agrobacterium vitis S4 hypothetical protein YP_002549131.1 1314382 D 311402 CDS YP_002549132.1 222148175 7387378 1314813..1315592 1 NC_011989.1 hypothetical protein 1315592 7387378 Avi_1573 Agrobacterium vitis S4 hypothetical protein YP_002549132.1 1314813 D 311402 CDS YP_002549133.1 222148176 7387379 complement(1315582..1316271) 1 NC_011989.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 1316271 purN 7387379 purN Agrobacterium vitis S4 phosphoribosylglycinamide formyltransferase YP_002549133.1 1315582 R 311402 CDS YP_002549134.1 222148177 7387380 complement(1316268..1317341) 1 NC_011989.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1317341 garS 7387380 garS Agrobacterium vitis S4 phosphoribosylaminoimidazole synthetase YP_002549134.1 1316268 R 311402 CDS YP_002549135.1 222148178 7387381 1317612..1318751 1 NC_011989.1 permease 1318751 7387381 Avi_1577 Agrobacterium vitis S4 permease YP_002549135.1 1317612 D 311402 CDS YP_002549136.1 222148179 7387382 1318752..1319474 1 NC_011989.1 hypothetical protein 1319474 7387382 Avi_1578 Agrobacterium vitis S4 hypothetical protein YP_002549136.1 1318752 D 311402 CDS YP_002549137.1 222148180 7387383 1319582..1321843 1 NC_011989.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1321843 ppk 7387383 ppk Agrobacterium vitis S4 polyphosphate kinase YP_002549137.1 1319582 D 311402 CDS YP_002549138.1 222148181 7387384 1322020..1323540 1 NC_011989.1 exopolyphosphatase 1323540 ppx 7387384 ppx Agrobacterium vitis S4 exopolyphosphatase YP_002549138.1 1322020 D 311402 CDS YP_002549139.1 222148182 7387385 complement(1323561..1324052) 1 NC_011989.1 LysR family transcriptional regulator 1324052 7387385 Avi_1583 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002549139.1 1323561 R 311402 CDS YP_002549140.1 222148183 7387386 1324330..1325691 1 NC_011989.1 manganese transport protein 1325691 mntH 7387386 mntH Agrobacterium vitis S4 manganese transport protein YP_002549140.1 1324330 D 311402 CDS YP_002549141.1 222148184 7387387 complement(1325675..1326694) 1 NC_011989.1 hypothetical protein 1326694 7387387 Avi_1585 Agrobacterium vitis S4 hypothetical protein YP_002549141.1 1325675 R 311402 CDS YP_002549142.1 222148185 7387388 complement(1326694..1327671) 1 NC_011989.1 hypothetical protein 1327671 7387388 Avi_1586 Agrobacterium vitis S4 hypothetical protein YP_002549142.1 1326694 R 311402 CDS YP_002549143.1 222148186 7387389 complement(1327727..1328179) 1 NC_011989.1 hypothetical protein 1328179 7387389 Avi_1587 Agrobacterium vitis S4 hypothetical protein YP_002549143.1 1327727 R 311402 CDS YP_002549144.1 222148187 7387390 complement(1328221..1329375) 1 NC_011989.1 ribonuclease D 1329375 rnd 7387390 rnd Agrobacterium vitis S4 ribonuclease D YP_002549144.1 1328221 R 311402 CDS YP_002549145.1 222148188 7387391 complement(1329611..1331023) 1 NC_011989.1 cu-oxidase multicopper oxidase 1331023 7387391 Avi_1589 Agrobacterium vitis S4 cu-oxidase multicopper oxidase YP_002549145.1 1329611 R 311402 CDS YP_002549146.1 222148189 7387392 complement(1331111..1332346) 1 NC_011989.1 MFS permease 1332346 7387392 Avi_1591 Agrobacterium vitis S4 MFS permease YP_002549146.1 1331111 R 311402 CDS YP_002549147.1 222148190 7387393 1332566..1334371 1 NC_011989.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1334371 aspS 7387393 aspS Agrobacterium vitis S4 aspartyl-tRNA synthetase YP_002549147.1 1332566 D 311402 CDS YP_002549148.1 222148191 7387394 1334376..1334906 1 NC_011989.1 hypothetical protein 1334906 7387394 Avi_1593 Agrobacterium vitis S4 hypothetical protein YP_002549148.1 1334376 D 311402 CDS YP_002549149.1 222148192 7387395 complement(1334987..1336210) 1 NC_011989.1 hypothetical protein 1336210 7387395 Avi_1594 Agrobacterium vitis S4 hypothetical protein YP_002549149.1 1334987 R 311402 CDS YP_002549150.1 222148193 7387396 1336410..1338686 1 NC_011989.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1338686 parC 7387396 parC Agrobacterium vitis S4 DNA topoisomerase IV subunit A YP_002549150.1 1336410 D 311402 CDS YP_002549151.1 222148194 7387397 complement(1338897..1340921) 1 NC_011989.1 GGDEF family protein 1340921 7387397 Avi_1597 Agrobacterium vitis S4 GGDEF family protein YP_002549151.1 1338897 R 311402 CDS YP_002549152.1 222148195 7387398 1341232..1342278 1 NC_011989.1 hypothetical protein 1342278 7387398 Avi_1598 Agrobacterium vitis S4 hypothetical protein YP_002549152.1 1341232 D 311402 CDS YP_002549153.1 222148196 7387399 1342748..1344532 1 NC_011989.1 GGDEF family protein 1344532 7387399 Avi_1600 Agrobacterium vitis S4 GGDEF family protein YP_002549153.1 1342748 D 311402 CDS YP_002549154.1 222148197 7387400 complement(1344616..1345377) 1 NC_011989.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 1345377 7387400 Avi_1601 Agrobacterium vitis S4 arginyl-tRNA-protein transferase YP_002549154.1 1344616 R 311402 CDS YP_002549155.1 222148198 7387401 complement(1345713..1346171) 1 NC_011989.1 hypothetical protein 1346171 7387401 Avi_1602 Agrobacterium vitis S4 hypothetical protein YP_002549155.1 1345713 R 311402 CDS YP_002549156.1 222148199 7387402 complement(1346294..1347307) 1 NC_011989.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1347307 hemB 7387402 hemB Agrobacterium vitis S4 delta-aminolevulinic acid dehydratase YP_002549156.1 1346294 R 311402 CDS YP_002549157.1 222148200 7387403 1347490..1347927 1 NC_011989.1 hypothetical protein 1347927 7387403 Avi_1604 Agrobacterium vitis S4 hypothetical protein YP_002549157.1 1347490 D 311402 CDS YP_002549158.1 222148201 7387404 1348076..1348588 1 NC_011989.1 exopolysaccharide II synthesis transcriptional activator ExpG 1348588 mucS 7387404 mucS Agrobacterium vitis S4 exopolysaccharide II synthesis transcriptional activator ExpG YP_002549158.1 1348076 D 311402 CDS YP_002549159.1 222148202 7387405 1349096..1350328 1 NC_011989.1 hypothetical protein 1350328 7387405 Avi_1609 Agrobacterium vitis S4 hypothetical protein YP_002549159.1 1349096 D 311402 CDS YP_002549160.1 222148203 7387406 1350531..1351820 1 NC_011989.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1351820 glyA 7387406 glyA Agrobacterium vitis S4 serine hydroxymethyltransferase YP_002549160.1 1350531 D 311402 CDS YP_002549161.1 222148204 7387407 1351830..1352306 1 NC_011989.1 transcriptional regulator NrdR 1352306 nrdR 7387407 nrdR Agrobacterium vitis S4 transcriptional regulator NrdR YP_002549161.1 1351830 D 311402 CDS YP_002549162.1 222148205 7387408 1352309..1353409 1 NC_011989.1 bifunctional riboflavin deaminase-reductase 1353409 ribD 7387408 ribD Agrobacterium vitis S4 bifunctional riboflavin deaminase-reductase YP_002549162.1 1352309 D 311402 CDS YP_002549163.1 222148206 7387409 1353406..1354020 1 NC_011989.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1354020 ribc 7387409 ribc Agrobacterium vitis S4 riboflavin synthase subunit alpha YP_002549163.1 1353406 D 311402 CDS YP_002549164.1 222148207 7387410 complement(1354082..1354459) 1 NC_011989.1 hypothetical protein 1354459 7387410 Avi_1616 Agrobacterium vitis S4 hypothetical protein YP_002549164.1 1354082 R 311402 CDS YP_002549165.1 222148208 7387411 1354990..1355448 1 NC_011989.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1355448 ribH 7387411 ribH Agrobacterium vitis S4 6,7-dimethyl-8-ribityllumazine synthase YP_002549165.1 1354990 D 311402 CDS YP_002549166.1 222148209 7387412 1355453..1355935 1 NC_011989.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1355935 nusB 7387412 nusB Agrobacterium vitis S4 transcription antitermination protein NusB YP_002549166.1 1355453 D 311402 CDS YP_002549167.1 222148210 7387413 1355962..1357188 1 NC_011989.1 MFS permease 1357188 7387413 Avi_1621 Agrobacterium vitis S4 MFS permease YP_002549167.1 1355962 D 311402 CDS YP_002549168.1 222148211 7387414 1357527..1359665 1 NC_011989.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1359665 hppA 7387414 hppA Agrobacterium vitis S4 membrane-bound proton-translocating pyrophosphatase YP_002549168.1 1357527 D 311402 CDS YP_002549169.1 222148212 7387415 complement(1359744..1360436) 1 NC_011989.1 hypothetical protein 1360436 7387415 Avi_1624 Agrobacterium vitis S4 hypothetical protein YP_002549169.1 1359744 R 311402 CDS YP_002549170.1 222148213 7387416 1360585..1361139 1 NC_011989.1 hypothetical protein 1361139 7387416 Avi_1626 Agrobacterium vitis S4 hypothetical protein YP_002549170.1 1360585 D 311402 CDS YP_002549171.1 222148214 7387417 1361136..1361699 1 NC_011989.1 hypothetical protein 1361699 7387417 Avi_1627 Agrobacterium vitis S4 hypothetical protein YP_002549171.1 1361136 D 311402 CDS YP_002549172.1 222148215 7387418 1361834..1362877 1 NC_011989.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1362877 plsX 7387418 plsX Agrobacterium vitis S4 putative glycerol-3-phosphate acyltransferase PlsX YP_002549172.1 1361834 D 311402 CDS YP_002549173.1 222148216 7387419 1362897..1363868 1 NC_011989.1 3-oxoacyl-ACP synthase 1363868 fabH 7387419 fabH Agrobacterium vitis S4 3-oxoacyl-ACP synthase YP_002549173.1 1362897 D 311402 CDS YP_002549174.1 222148217 7387420 1363966..1364304 1 NC_011989.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1364304 ihfA 7387420 ihfA Agrobacterium vitis S4 integration host factor subunit alpha YP_002549174.1 1363966 D 311402 CDS YP_002549175.1 222148218 7387421 1364498..1365043 1 NC_011989.1 hypothetical protein 1365043 7387421 Avi_1633 Agrobacterium vitis S4 hypothetical protein YP_002549175.1 1364498 D 311402 CDS YP_002549176.1 222148219 7387422 complement(1365156..1365608) 1 NC_011989.1 hypothetical protein 1365608 7387422 Avi_1634 Agrobacterium vitis S4 hypothetical protein YP_002549176.1 1365156 R 311402 CDS YP_002549177.1 222148220 7387423 1365718..1366509 1 NC_011989.1 hypothetical protein 1366509 7387423 Avi_1635 Agrobacterium vitis S4 hypothetical protein YP_002549177.1 1365718 D 311402 CDS YP_002549178.1 222148221 7387424 1367090..1368118 1 NC_011989.1 two component sensor kinase 1368118 exsG 7387424 exsG Agrobacterium vitis S4 two component sensor kinase YP_002549178.1 1367090 D 311402 CDS YP_002549179.1 222148222 7387425 complement(1368272..1368796) 1 NC_011989.1 integrase 1368796 7387425 Avi_1637 Agrobacterium vitis S4 integrase YP_002549179.1 1368272 R 311402 CDS YP_002549180.1 222148223 7387426 complement(1369010..1369804) 1 NC_011989.1 IS21 family transposase 1369804 istB 7387426 istB Agrobacterium vitis S4 IS21 family transposase YP_002549180.1 1369010 R 311402 CDS YP_002549181.1 222148224 7387427 complement(1369794..1371311) 1 NC_011989.1 IS21 family transposase 1371311 istA 7387427 istA Agrobacterium vitis S4 IS21 family transposase YP_002549181.1 1369794 R 311402 CDS YP_002549182.1 222148225 7387428 complement(1371367..1373079) 1 NC_011989.1 Subtilisin-like serine protease 1373079 7387428 Avi_1641 Agrobacterium vitis S4 Subtilisin-like serine protease YP_002549182.1 1371367 R 311402 CDS YP_002549183.1 222148226 7386662 complement(1373092..1374018) 1 NC_011989.1 AAA-family ATPase 1374018 7386662 Avi_1642 Agrobacterium vitis S4 AAA-family ATPase YP_002549183.1 1373092 R 311402 CDS YP_002549184.1 222148227 7386663 complement(1374593..1375255) 1 NC_011989.1 transcriptional regulator 1375255 7386663 Avi_1644 Agrobacterium vitis S4 transcriptional regulator YP_002549184.1 1374593 R 311402 CDS YP_002549185.1 222148228 7386664 1375343..1376326 1 NC_011989.1 AraC family transcriptional regulator 1376326 7386664 Avi_1645 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002549185.1 1375343 D 311402 CDS YP_002549186.1 222148229 7386665 1376696..1379098 1 NC_011989.1 vgrG protein 1379098 vgrG 7386665 vgrG Agrobacterium vitis S4 vgrG protein YP_002549186.1 1376696 D 311402 CDS YP_002549187.1 222148230 7386666 1379102..1379833 1 NC_011989.1 hypothetical protein 1379833 7386666 Avi_1647 Agrobacterium vitis S4 hypothetical protein YP_002549187.1 1379102 D 311402 CDS YP_002549188.1 222148231 7386667 1380667..1381299 1 NC_011989.1 hypothetical protein 1381299 7386667 Avi_1649 Agrobacterium vitis S4 hypothetical protein YP_002549188.1 1380667 D 311402 CDS YP_002549189.1 222148232 7386668 1381581..1381865 1 NC_011989.1 hypothetical protein 1381865 7386668 Avi_1650 Agrobacterium vitis S4 hypothetical protein YP_002549189.1 1381581 D 311402 CDS YP_002549190.1 222148233 7386669 complement(1382144..1382860) 1 NC_011989.1 Zn-dependent hydrolase 1382860 attM 7386669 attM Agrobacterium vitis S4 Zn-dependent hydrolase YP_002549190.1 1382144 R 311402 CDS YP_002549191.1 222148234 7386670 complement(1382942..1383757) 1 NC_011989.1 hypothetical protein 1383757 7386670 Avi_1655 Agrobacterium vitis S4 hypothetical protein YP_002549191.1 1382942 R 311402 CDS YP_002549192.1 222148235 7388001 1384843..1385871 1 NC_011989.1 hypothetical protein 1385871 7388001 Avi_1658 Agrobacterium vitis S4 hypothetical protein YP_002549192.1 1384843 D 311402 CDS YP_002549193.1 222148236 7386672 complement(1385970..1386119) 1 NC_011989.1 hypothetical protein 1386119 7386672 Avi_1659 Agrobacterium vitis S4 hypothetical protein YP_002549193.1 1385970 R 311402 CDS YP_002549194.1 222148237 7386673 complement(1386231..1387490) 1 NC_011989.1 glycosyl transferase 1387490 7386673 Avi_1661 Agrobacterium vitis S4 glycosyl transferase YP_002549194.1 1386231 R 311402 CDS YP_002549195.1 222148238 7386674 complement(1387522..1388748) 1 NC_011989.1 hypothetical protein 1388748 7386674 Avi_1662 Agrobacterium vitis S4 hypothetical protein YP_002549195.1 1387522 R 311402 CDS YP_002549196.1 222148239 7386675 complement(1388745..1390295) 1 NC_011989.1 polysaccharide biosynthesis glycosyltransferase 1390295 7386675 Avi_1663 Agrobacterium vitis S4 polysaccharide biosynthesis glycosyltransferase YP_002549196.1 1388745 R 311402 CDS YP_002549197.1 222148240 7386676 complement(1390396..1391532) 1 NC_011989.1 glycosyl transferase 1391532 7386676 Avi_1664 Agrobacterium vitis S4 glycosyl transferase YP_002549197.1 1390396 R 311402 CDS YP_002549198.1 222148241 7386677 complement(1391532..1392101) 1 NC_011989.1 polysaccharide export protein 1392101 gumB 7386677 gumB Agrobacterium vitis S4 polysaccharide export protein YP_002549198.1 1391532 R 311402 CDS YP_002549199.1 222148242 7386678 1392279..1394522 1 NC_011989.1 exopolysaccharide polymerization/transport protein 1394522 exoP 7386678 exoP Agrobacterium vitis S4 exopolysaccharide polymerization/transport protein YP_002549199.1 1392279 D 311402 CDS YP_002549200.1 222148243 7386679 complement(1394574..1395788) 1 NC_011989.1 hypothetical protein 1395788 7386679 Avi_1667 Agrobacterium vitis S4 hypothetical protein YP_002549200.1 1394574 R 311402 CDS YP_002549201.1 222148244 7386680 complement(1395868..1396116) 1 NC_011989.1 hypothetical protein 1396116 7386680 Avi_1668 Agrobacterium vitis S4 hypothetical protein YP_002549201.1 1395868 R 311402 CDS YP_002549202.1 222148245 7386681 1396233..1397327 1 NC_011989.1 cytochrome oxidase assembly factor 1397327 cox15 7386681 cox15 Agrobacterium vitis S4 cytochrome oxidase assembly factor YP_002549202.1 1396233 D 311402 CDS YP_002549203.1 222148246 7386682 complement(1397307..1398134) 1 NC_011989.1 hypothetical protein 1398134 7386682 Avi_1671 Agrobacterium vitis S4 hypothetical protein YP_002549203.1 1397307 R 311402 CDS YP_002549204.1 222148247 7386683 complement(1398197..1399063) 1 NC_011989.1 streptomycin resistance protein 1399063 strB 7386683 strB Agrobacterium vitis S4 streptomycin resistance protein YP_002549204.1 1398197 R 311402 CDS YP_002549205.1 222148248 7386684 complement(1399080..1400012) 1 NC_011989.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 1400012 argC 7386684 argC Agrobacterium vitis S4 N-acetyl-gamma-glutamyl-phosphate reductase YP_002549205.1 1399080 R 311402 CDS YP_002549206.1 222148249 7386685 complement(1400082..1401035) 1 NC_011989.1 catalyzes the formation of putrescine from agmatine; agmatinase 1401035 speB 7386685 speB Agrobacterium vitis S4 agmatinase YP_002549206.1 1400082 R 311402 CDS YP_002549207.1 222148250 7386686 complement(1401094..1401939) 1 NC_011989.1 hypothetical protein 1401939 7386686 Avi_1676 Agrobacterium vitis S4 hypothetical protein YP_002549207.1 1401094 R 311402 CDS YP_002549208.1 222148251 7386687 complement(1402058..1402903) 1 NC_011989.1 hypothetical protein 1402903 7386687 Avi_1678 Agrobacterium vitis S4 hypothetical protein YP_002549208.1 1402058 R 311402 CDS YP_002549209.1 222148252 7386688 complement(1402975..1403337) 1 NC_011989.1 hypothetical protein 1403337 7386688 Avi_1679 Agrobacterium vitis S4 hypothetical protein YP_002549209.1 1402975 R 311402 CDS YP_002549210.1 222148253 7386689 complement(1403453..1403920) 1 NC_011989.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1403920 rpsI 7386689 rpsI Agrobacterium vitis S4 30S ribosomal protein S9 YP_002549210.1 1403453 R 311402 CDS YP_002549211.1 222148254 7386690 complement(1403923..1404387) 1 NC_011989.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1404387 rplM 7386690 rplM Agrobacterium vitis S4 50S ribosomal protein L13 YP_002549211.1 1403923 R 311402 CDS YP_002549212.1 222148255 7386691 1404482..1404712 1 NC_011989.1 hypothetical protein 1404712 7386691 Avi_1683 Agrobacterium vitis S4 hypothetical protein YP_002549212.1 1404482 D 311402 CDS YP_002549213.1 222148256 7386692 1405613..1406077 1 NC_011989.1 hypothetical protein 1406077 7386692 Avi_1684 Agrobacterium vitis S4 hypothetical protein YP_002549213.1 1405613 D 311402 CDS YP_002549214.1 222148257 7386693 complement(1406159..1406527) 1 NC_011989.1 hypothetical protein 1406527 7386693 Avi_1686 Agrobacterium vitis S4 hypothetical protein YP_002549214.1 1406159 R 311402 CDS YP_002549215.1 222148258 7386694 1406746..1407198 1 NC_011989.1 hypothetical protein 1407198 7386694 Avi_1687 Agrobacterium vitis S4 hypothetical protein YP_002549215.1 1406746 D 311402 CDS YP_002549216.1 222148259 7386695 1407338..1408621 1 NC_011989.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 1408621 7386695 Avi_1690 Agrobacterium vitis S4 O-acetylhomoserine aminocarboxypropyltransferase YP_002549216.1 1407338 D 311402 CDS YP_002549217.1 222148260 7386696 complement(1408687..1409817) 1 NC_011989.1 hypothetical protein 1409817 7386696 Avi_1691 Agrobacterium vitis S4 hypothetical protein YP_002549217.1 1408687 R 311402 CDS YP_002549218.1 222148261 7386697 1410204..1410548 1 NC_011989.1 hypothetical protein 1410548 7386697 Avi_1693 Agrobacterium vitis S4 hypothetical protein YP_002549218.1 1410204 D 311402 CDS YP_002549219.1 222148262 7386698 complement(1410560..1411804) 1 NC_011989.1 cytochrome P450 hydroxylase 1411804 7386698 Avi_1694 Agrobacterium vitis S4 cytochrome P450 hydroxylase YP_002549219.1 1410560 R 311402 CDS YP_002549220.1 222148263 7386699 complement(1411849..1413111) 1 NC_011989.1 GGDEF family protein 1413111 7386699 Avi_1695 Agrobacterium vitis S4 GGDEF family protein YP_002549220.1 1411849 R 311402 CDS YP_002549221.1 222148264 7386700 1413481..1414113 1 NC_011989.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1414113 clpP 7386700 clpP Agrobacterium vitis S4 ATP-dependent Clp protease proteolytic subunit YP_002549221.1 1413481 D 311402 CDS YP_002549222.1 222148265 7386701 1414402..1415679 1 NC_011989.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1415679 clpX 7386701 clpX Agrobacterium vitis S4 ATP-dependent protease ATP-binding subunit ClpX YP_002549222.1 1414402 D 311402 CDS YP_002549223.1 222148266 7386702 1416084..1418687 1 NC_011989.1 ATP-dependent protease La 1418687 lon 7386702 lon Agrobacterium vitis S4 ATP-dependent protease La YP_002549223.1 1416084 D 311402 CDS YP_002549224.1 222148267 7386703 1419015..1419290 1 NC_011989.1 HU-like DNA-binding protein alpha subunit 1419290 hupA 7386703 hupA Agrobacterium vitis S4 HU-like DNA-binding protein alpha subunit YP_002549224.1 1419015 D 311402 CDS YP_002549225.1 222148268 7386704 1419666..1421003 1 NC_011989.1 Na+/melibiose symporter and related transporter protein 1421003 7386704 Avi_1702 Agrobacterium vitis S4 Na+/melibiose symporter and related transporter protein YP_002549225.1 1419666 D 311402 CDS YP_002549226.1 222148269 7386705 complement(1421004..1421522) 1 NC_011989.1 transcriptional regulator MarR family 1421522 7386705 Avi_1703 Agrobacterium vitis S4 transcriptional regulator MarR family YP_002549226.1 1421004 R 311402 CDS YP_002549227.1 222148270 7386706 1421742..1423340 1 NC_011989.1 long-chain-fatty-acid-CoA-ligase 1423340 fadD 7386706 fadD Agrobacterium vitis S4 long-chain-fatty-acid-CoA-ligase YP_002549227.1 1421742 D 311402 CDS YP_002549228.1 222148271 7386707 1423352..1424185 1 NC_011989.1 catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; p-hydroxycinnamoyl CoA hydratase/lyase 1424185 fadB 7386707 fadB Agrobacterium vitis S4 p-hydroxycinnamoyl CoA hydratase/lyase YP_002549228.1 1423352 D 311402 CDS YP_002549229.1 222148272 7386708 complement(1424777..1425574) 1 NC_011989.1 hypothetical protein 1425574 7386708 Avi_1707 Agrobacterium vitis S4 hypothetical protein YP_002549229.1 1424777 R 311402 CDS YP_002549230.1 222148273 7386709 complement(1425616..1426308) 1 NC_011989.1 hypothetical protein 1426308 7386709 Avi_1708 Agrobacterium vitis S4 hypothetical protein YP_002549230.1 1425616 R 311402 CDS YP_002549231.1 222148274 7388003 1427916..1428290 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1428290 nuoA 7388003 nuoA Agrobacterium vitis S4 NADH dehydrogenase subunit A YP_002549231.1 1427916 D 311402 CDS YP_002549232.1 222148275 7386711 1428281..1428868 1 NC_011989.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1428868 nuoB 7386711 nuoB Agrobacterium vitis S4 NADH dehydrogenase subunit B YP_002549232.1 1428281 D 311402 CDS YP_002549233.1 222148276 7386712 1428886..1429488 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1429488 nuoC 7386712 nuoC Agrobacterium vitis S4 NADH dehydrogenase subunit C YP_002549233.1 1428886 D 311402 CDS YP_002549234.1 222148277 7386713 1429508..1430698 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1430698 nouD 7386713 nouD Agrobacterium vitis S4 NADH dehydrogenase subunit D YP_002549234.1 1429508 D 311402 CDS YP_002549235.1 222148278 7386714 1430956..1431756 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1431756 nuoE 7386714 nuoE Agrobacterium vitis S4 NADH dehydrogenase subunit E YP_002549235.1 1430956 D 311402 CDS YP_002549236.1 222148279 7386715 1431760..1433064 1 NC_011989.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 1433064 nuoF 7386715 nuoF Agrobacterium vitis S4 NADH dehydrogenase I subunit F YP_002549236.1 1431760 D 311402 CDS YP_002549237.1 222148280 7386716 1433109..1433840 1 NC_011989.1 hypothetical protein 1433840 7386716 Avi_1719 Agrobacterium vitis S4 hypothetical protein YP_002549237.1 1433109 D 311402 CDS YP_002549238.1 222148281 7386717 1434123..1436204 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1436204 7386717 Avi_1720 Agrobacterium vitis S4 NADH dehydrogenase subunit G YP_002549238.1 1434123 D 311402 CDS YP_002549239.1 222148282 7386718 1436217..1437260 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1437260 nuoH 7386718 nuoH Agrobacterium vitis S4 NADH dehydrogenase subunit H YP_002549239.1 1436217 D 311402 CDS YP_002549240.1 222148283 7386719 1437301..1437792 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1437792 nuoI 7386719 nuoI Agrobacterium vitis S4 NADH dehydrogenase subunit I YP_002549240.1 1437301 D 311402 CDS YP_002549241.1 222148284 7386720 1437948..1438562 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1438562 nuoJ 7386720 nuoJ Agrobacterium vitis S4 NADH dehydrogenase subunit J YP_002549241.1 1437948 D 311402 CDS YP_002549242.1 222148285 7386721 1438595..1438903 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1438903 nuoK 7386721 nuoK Agrobacterium vitis S4 NADH dehydrogenase subunit K YP_002549242.1 1438595 D 311402 CDS YP_002549243.1 222148286 7386722 1438911..1440902 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1440902 nuoL 7386722 nuoL Agrobacterium vitis S4 NADH dehydrogenase subunit L YP_002549243.1 1438911 D 311402 CDS YP_002549244.1 222148287 7386723 1440875..1442413 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1442413 nuoM 7386723 nuoM Agrobacterium vitis S4 NADH dehydrogenase subunit M YP_002549244.1 1440875 D 311402 CDS YP_002549245.1 222148288 7386724 1442431..1443870 1 NC_011989.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1443870 nuoN 7386724 nuoN Agrobacterium vitis S4 NADH dehydrogenase subunit N YP_002549245.1 1442431 D 311402 CDS YP_002549246.1 222148289 7386725 1443867..1444655 1 NC_011989.1 birA bifunctional protein 1444655 birA 7386725 birA Agrobacterium vitis S4 birA bifunctional protein YP_002549246.1 1443867 D 311402 CDS YP_002549247.1 222148290 7386726 1444652..1446319 1 NC_011989.1 metal dependent hydrolase 1446319 7386726 Avi_1731 Agrobacterium vitis S4 metal dependent hydrolase YP_002549247.1 1444652 D 311402 CDS YP_002549248.1 222148291 7386727 1446441..1446845 1 NC_011989.1 lactoylglutathione lyase 1446845 gloA 7386727 gloA Agrobacterium vitis S4 lactoylglutathione lyase YP_002549248.1 1446441 D 311402 CDS YP_002549249.1 222148292 7386728 complement(1446876..1447274) 1 NC_011989.1 hypothetical protein 1447274 7386728 Avi_1735 Agrobacterium vitis S4 hypothetical protein YP_002549249.1 1446876 R 311402 CDS YP_002549250.1 222148293 7386729 1447432..1448025 1 NC_011989.1 TetR family transcriptional regulator 1448025 7386729 Avi_1736 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002549250.1 1447432 D 311402 CDS YP_002549251.1 222148294 7386730 1448181..1448450 1 NC_011989.1 hypothetical protein 1448450 7386730 Avi_1737 Agrobacterium vitis S4 hypothetical protein YP_002549251.1 1448181 D 311402 CDS YP_002549252.1 222148295 7386731 1448895..1450391 1 NC_011989.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1450391 proS 7386731 proS Agrobacterium vitis S4 prolyl-tRNA synthetase YP_002549252.1 1448895 D 311402 CDS YP_002549253.1 222148296 7386732 1450411..1451718 1 NC_011989.1 ABC transporter permease 1451718 7386732 Avi_1740 Agrobacterium vitis S4 ABC transporter permease YP_002549253.1 1450411 D 311402 CDS YP_002549254.1 222148297 7386733 1451733..1452422 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (lipoprotein) 1452422 lolD 7386733 lolD Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (lipoprotein) YP_002549254.1 1451733 D 311402 CDS YP_002549255.1 222148298 7386734 1452953..1456492 1 NC_011989.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1456492 dnaE 7386734 dnaE Agrobacterium vitis S4 DNA polymerase III subunit alpha YP_002549255.1 1452953 D 311402 CDS YP_002549256.1 222148299 7386735 complement(1456566..1457801) 1 NC_011989.1 hypothetical protein 1457801 7386735 Avi_1744 Agrobacterium vitis S4 hypothetical protein YP_002549256.1 1456566 R 311402 CDS YP_002549257.1 222148300 7386736 complement(1458050..1459336) 1 NC_011989.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1459336 dinP 7386736 dinP Agrobacterium vitis S4 DNA polymerase IV YP_002549257.1 1458050 R 311402 CDS YP_002549258.1 222148301 7386737 complement(1459445..1460092) 1 NC_011989.1 hypothetical protein 1460092 7386737 Avi_1747 Agrobacterium vitis S4 hypothetical protein YP_002549258.1 1459445 R 311402 CDS YP_002549259.1 222148302 7386738 complement(1460092..1460400) 1 NC_011989.1 hypothetical protein 1460400 7386738 Avi_1748 Agrobacterium vitis S4 hypothetical protein YP_002549259.1 1460092 R 311402 CDS YP_002549260.1 222148303 7386739 1460643..1461014 1 NC_011989.1 two component response regulator 1461014 divK 7386739 divK Agrobacterium vitis S4 two component response regulator YP_002549260.1 1460643 D 311402 CDS YP_002549261.1 222148304 7386740 1461199..1462572 1 NC_011989.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 1462572 pleD 7386740 pleD Agrobacterium vitis S4 response regulator PleD YP_002549261.1 1461199 D 311402 CDS YP_002549262.1 222148305 7386741 complement(1463612..1463779) 1 NC_011989.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1463779 rpmG 7386741 rpmG Agrobacterium vitis S4 50S ribosomal protein L33 YP_002549262.1 1463612 R 311402 CDS YP_002549263.1 222148306 7386742 complement(1463873..1465057) 1 NC_011989.1 MFS permease 1465057 7386742 Avi_1753 Agrobacterium vitis S4 MFS permease YP_002549263.1 1463873 R 311402 CDS YP_002549264.1 222148307 7386743 complement(1465311..1465766) 1 NC_011989.1 hypothetical protein 1465766 7386743 Avi_1754 Agrobacterium vitis S4 hypothetical protein YP_002549264.1 1465311 R 311402 CDS YP_002549265.1 222148308 7386744 complement(1465913..1468291) 1 NC_011989.1 ribonuclease R 1468291 rnr 7386744 rnr Agrobacterium vitis S4 ribonuclease R YP_002549265.1 1465913 R 311402 CDS YP_002549266.1 222148309 7386745 complement(1468288..1471002) 1 NC_011989.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1471002 topA 7386745 topA Agrobacterium vitis S4 DNA topoisomerase I YP_002549266.1 1468288 R 311402 CDS YP_002549267.1 222148310 7386746 complement(1471495..1472646) 1 NC_011989.1 DNA protecting protein DprA 1472646 dprA 7386746 dprA Agrobacterium vitis S4 DNA protecting protein DprA YP_002549267.1 1471495 R 311402 CDS YP_002549268.1 222148311 7386747 complement(1472653..1473282) 1 NC_011989.1 hypothetical protein 1473282 7386747 Avi_1760 Agrobacterium vitis S4 hypothetical protein YP_002549268.1 1472653 R 311402 CDS YP_002549269.1 222148312 7386748 complement(1473300..1474592) 1 NC_011989.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1474592 pyrC 7386748 pyrC Agrobacterium vitis S4 dihydroorotase YP_002549269.1 1473300 R 311402 CDS YP_002549270.1 222148313 7386749 complement(1474589..1475545) 1 NC_011989.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1475545 pyrB 7386749 pyrB Agrobacterium vitis S4 aspartate carbamoyltransferase catalytic subunit YP_002549270.1 1474589 R 311402 CDS YP_002549271.1 222148314 7386750 1475853..1477496 1 NC_011989.1 acyl-CoA dehydrogenase 1477496 acd 7386750 acd Agrobacterium vitis S4 acyl-CoA dehydrogenase YP_002549271.1 1475853 D 311402 CDS YP_002549272.1 222148315 7386751 1477557..1477985 1 NC_011989.1 Histone acetyltransferase 1477985 7386751 Avi_1764 Agrobacterium vitis S4 Histone acetyltransferase YP_002549272.1 1477557 D 311402 CDS YP_002549273.1 222148316 7386752 1478316..1478636 1 NC_011989.1 hypothetical protein 1478636 7386752 Avi_1767 Agrobacterium vitis S4 hypothetical protein YP_002549273.1 1478316 D 311402 CDS YP_002549274.1 222148317 7386753 complement(1478591..1479067) 1 NC_011989.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1479067 7386753 Avi_1768 Agrobacterium vitis S4 Holliday junction resolvase-like protein YP_002549274.1 1478591 R 311402 CDS YP_002549275.1 222148318 7386754 1479212..1479916 1 NC_011989.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase 1479916 7386754 Avi_1769 Agrobacterium vitis S4 metal-dependent hydrolase YP_002549275.1 1479212 D 311402 CDS YP_002549276.1 222148319 7386755 1480080..1480367 1 NC_011989.1 glutamyl-tRNA-Gln-amidotransferase chain C 1480367 gatC 7386755 gatC Agrobacterium vitis S4 glutamyl-tRNA-Gln-amidotransferase chain C YP_002549276.1 1480080 D 311402 CDS YP_002549277.1 222148320 7386756 1480439..1481920 1 NC_011989.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1481920 gatA 7386756 gatA Agrobacterium vitis S4 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002549277.1 1480439 D 311402 CDS YP_002549278.1 222148321 7386757 1481925..1482404 1 NC_011989.1 acetyltransferase 1482404 7386757 Avi_1774 Agrobacterium vitis S4 acetyltransferase YP_002549278.1 1481925 D 311402 CDS YP_002549279.1 222148322 7386758 1482501..1483019 1 NC_011989.1 acetyltransferase 1483019 7386758 Avi_1775 Agrobacterium vitis S4 acetyltransferase YP_002549279.1 1482501 D 311402 CDS YP_002549280.1 222148323 7386759 complement(1483032..1484474) 1 NC_011989.1 hypothetical protein 1484474 7386759 Avi_1776 Agrobacterium vitis S4 hypothetical protein YP_002549280.1 1483032 R 311402 CDS YP_002549281.1 222148324 7386760 complement(1484490..1484813) 1 NC_011989.1 Lipid A biosynthesis protein 1484813 7386760 Avi_1777 Agrobacterium vitis S4 Lipid A biosynthesis protein YP_002549281.1 1484490 R 311402 CDS YP_002549282.1 222148325 7386761 complement(1484806..1485573) 1 NC_011989.1 dolichol-phosphate mannosyltransferase 1485573 7386761 Avi_1778 Agrobacterium vitis S4 dolichol-phosphate mannosyltransferase YP_002549282.1 1484806 R 311402 CDS YP_002549283.1 222148326 7386762 1485920..1487422 1 NC_011989.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1487422 gatB 7386762 gatB Agrobacterium vitis S4 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002549283.1 1485920 D 311402 CDS YP_002549284.1 222148327 7386763 1487429..1487947 1 NC_011989.1 acetyltransferase 1487947 7386763 Avi_1782 Agrobacterium vitis S4 acetyltransferase YP_002549284.1 1487429 D 311402 CDS YP_002549285.1 222148328 7386764 1487987..1488448 1 NC_011989.1 acetyltransferase 1488448 7386764 Avi_1783 Agrobacterium vitis S4 acetyltransferase YP_002549285.1 1487987 D 311402 CDS YP_002549286.1 222148329 7386765 1488549..1488947 1 NC_011989.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 1488947 7386765 Avi_1784 Agrobacterium vitis S4 NADH dehydrogenase YP_002549286.1 1488549 D 311402 CDS YP_002549287.1 222148330 7386766 1489079..1489594 1 NC_011989.1 hypothetical protein 1489594 7386766 Avi_1785 Agrobacterium vitis S4 hypothetical protein YP_002549287.1 1489079 D 311402 CDS YP_002549288.1 222148331 7386767 complement(1489625..1490263) 1 NC_011989.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1490263 aat 7386767 aat Agrobacterium vitis S4 leucyl/phenylalanyl-tRNA--protein transferase YP_002549288.1 1489625 R 311402 CDS YP_002549289.1 222148332 7386768 complement(1490273..1491625) 1 NC_011989.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1491625 accC 7386768 accC Agrobacterium vitis S4 acetyl-CoA carboxylase biotin carboxylase subunit YP_002549289.1 1490273 R 311402 CDS YP_002549290.1 222148333 7386769 complement(1491630..1492118) 1 NC_011989.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1492118 accB 7386769 accB Agrobacterium vitis S4 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_002549290.1 1491630 R 311402 CDS YP_002549291.1 222148334 7386770 complement(1492144..1492581) 1 NC_011989.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1492581 aroQ 7386770 aroQ Agrobacterium vitis S4 3-dehydroquinate dehydratase YP_002549291.1 1492144 R 311402 CDS YP_002549292.1 222148335 7386771 complement(1492707..1493531) 1 NC_011989.1 outer membrane protein 1493531 7386771 Avi_1790 Agrobacterium vitis S4 outer membrane protein YP_002549292.1 1492707 R 311402 CDS YP_002549293.1 222148336 7386772 1493776..1494933 1 NC_011989.1 aspartate transaminase 1494933 aspB 7386772 aspB Agrobacterium vitis S4 aspartate transaminase YP_002549293.1 1493776 D 311402 CDS YP_002549294.1 222148337 7386773 1495057..1495629 1 NC_011989.1 hypothetical protein 1495629 7386773 Avi_1793 Agrobacterium vitis S4 hypothetical protein YP_002549294.1 1495057 D 311402 CDS YP_002549295.1 222148338 7386774 complement(1495734..1498841) 1 NC_011989.1 ribonuclease E 1498841 rne 7386774 rne Agrobacterium vitis S4 ribonuclease E YP_002549295.1 1495734 R 311402 CDS YP_002549296.1 222148339 7386775 1499498..1500802 1 NC_011989.1 N-acetylmuramoyl-L-alanine amidase 1500802 amiA 7386775 amiA Agrobacterium vitis S4 N-acetylmuramoyl-L-alanine amidase YP_002549296.1 1499498 D 311402 CDS YP_002549297.1 222148340 7386776 1501128..1503584 1 NC_011989.1 penicillin-binding protein 1a 1503584 mrcA 7386776 mrcA Agrobacterium vitis S4 penicillin-binding protein 1a YP_002549297.1 1501128 D 311402 CDS YP_002549298.1 222148341 7386777 1503783..1504817 1 NC_011989.1 peptide chain release factor 2 1504817 prfB 7386777 prfB Agrobacterium vitis S4 peptide chain release factor 2 YP_002549298.1 1503783 D 311402 CDS YP_002549299.1 222148342 7386778 1504948..1505847 1 NC_011989.1 orotidine 5-phosphate decarboxylase 1505847 7386778 Avi_1801 Agrobacterium vitis S4 orotidine 5-phosphate decarboxylase YP_002549299.1 1504948 D 311402 CDS YP_002549300.1 222148343 7386779 complement(1505854..1506399) 1 NC_011989.1 hypothetical protein 1506399 7386779 Avi_1802 Agrobacterium vitis S4 hypothetical protein YP_002549300.1 1505854 R 311402 CDS YP_002549301.1 222148344 7386780 complement(1506442..1507143) 1 NC_011989.1 hypothetical protein 1507143 7386780 Avi_1804 Agrobacterium vitis S4 hypothetical protein YP_002549301.1 1506442 R 311402 CDS YP_002549302.1 222148345 7388004 complement(1507597..1507746) 1 NC_011989.1 hypothetical protein 1507746 7388004 Avi_1808 Agrobacterium vitis S4 hypothetical protein YP_002549302.1 1507597 R 311402 CDS YP_002549303.1 222148346 7386782 complement(1508401..1509282) 1 NC_011989.1 tRNA/rRNA metyltransferase 1509282 7386782 Avi_1810 Agrobacterium vitis S4 tRNA/rRNA metyltransferase YP_002549303.1 1508401 R 311402 CDS YP_002549304.1 222148347 7388006 1509896..1511071 1 NC_011989.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1511071 tuf 7388006 tuf Agrobacterium vitis S4 elongation factor Tu YP_002549304.1 1509896 D 311402 CDS YP_002549305.1 222148348 7386784 1511339..1512028 1 NC_011989.1 hypothetical protein 1512028 7386784 Avi_1814 Agrobacterium vitis S4 hypothetical protein YP_002549305.1 1511339 D 311402 CDS YP_002549306.1 222148349 7386785 1512154..1512888 1 NC_011989.1 CMP KDO transferase 1512888 7386785 Avi_1815 Agrobacterium vitis S4 CMP KDO transferase YP_002549306.1 1512154 D 311402 CDS YP_002549307.1 222148350 7386786 1513026..1513679 1 NC_011989.1 hypothetical protein 1513679 7386786 Avi_1816 Agrobacterium vitis S4 hypothetical protein YP_002549307.1 1513026 D 311402 CDS YP_002549308.1 222148351 7388007 1514059..1514259 1 NC_011989.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1514259 secE 7388007 secE Agrobacterium vitis S4 preprotein translocase subunit SecE YP_002549308.1 1514059 D 311402 CDS YP_002549309.1 222148352 7386788 1514276..1514806 1 NC_011989.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 1514806 nusG 7386788 nusG Agrobacterium vitis S4 transcription antitermination protein NusG YP_002549309.1 1514276 D 311402 CDS YP_002549310.1 222148353 7386789 1514953..1515384 1 NC_011989.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1515384 rplK 7386789 rplK Agrobacterium vitis S4 50S ribosomal protein L11 YP_002549310.1 1514953 D 311402 CDS YP_002549311.1 222148354 7386790 1515387..1516082 1 NC_011989.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1516082 rplA 7386790 rplA Agrobacterium vitis S4 50S ribosomal protein L1 YP_002549311.1 1515387 D 311402 CDS YP_002549312.1 222148355 7386791 1516426..1516944 1 NC_011989.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1516944 rplJ 7386791 rplJ Agrobacterium vitis S4 50S ribosomal protein L10 YP_002549312.1 1516426 D 311402 CDS YP_002549313.1 222148356 7386792 1517013..1517387 1 NC_011989.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1517387 rplL 7386792 rplL Agrobacterium vitis S4 50S ribosomal protein L7/L12 YP_002549313.1 1517013 D 311402 CDS YP_002549314.1 222148357 7386793 1517641..1521780 1 NC_011989.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1521780 rpoB 7386793 rpoB Agrobacterium vitis S4 DNA-directed RNA polymerase subunit beta YP_002549314.1 1517641 D 311402 CDS YP_002549315.1 222148358 7386794 1521965..1526176 1 NC_011989.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1526176 rpoC 7386794 rpoC Agrobacterium vitis S4 DNA-directed RNA polymerase subunit beta' YP_002549315.1 1521965 D 311402 CDS YP_002549316.1 222148359 7386795 complement(1526326..1526760) 1 NC_011989.1 NTP pyrophosphohydrolase MutT family 1526760 7386795 Avi_1829 Agrobacterium vitis S4 NTP pyrophosphohydrolase MutT family YP_002549316.1 1526326 R 311402 CDS YP_002549317.1 222148360 7386796 complement(1526771..1527064) 1 NC_011989.1 hypothetical protein 1527064 7386796 Avi_1830 Agrobacterium vitis S4 hypothetical protein YP_002549317.1 1526771 R 311402 CDS YP_002549318.1 222148361 7386797 1527507..1528115 1 NC_011989.1 30S ribosomal protein S12 1528115 rpsL 7386797 rpsL Agrobacterium vitis S4 30S ribosomal protein S12 YP_002549318.1 1527507 D 311402 CDS YP_002549319.1 222148362 7386798 1528198..1528668 1 NC_011989.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1528668 rpsG 7386798 rpsG Agrobacterium vitis S4 30S ribosomal protein S7 YP_002549319.1 1528198 D 311402 CDS YP_002549320.1 222148363 7386799 1528703..1530802 1 NC_011989.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1530802 fusA 7386799 fusA Agrobacterium vitis S4 elongation factor G YP_002549320.1 1528703 D 311402 CDS YP_002549321.1 222148364 7386800 1530874..1532049 1 NC_011989.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1532049 tuf 7386800 tuf Agrobacterium vitis S4 elongation factor Tu YP_002549321.1 1530874 D 311402 CDS YP_002549322.1 222148365 7386801 1532371..1532679 1 NC_011989.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1532679 rpsJ 7386801 rpsJ Agrobacterium vitis S4 30S ribosomal protein S10 YP_002549322.1 1532371 D 311402 CDS YP_002549323.1 222148366 7386802 1532851..1533492 1 NC_011989.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1533492 rplC 7386802 rplC Agrobacterium vitis S4 50S ribosomal protein L3 YP_002549323.1 1532851 D 311402 CDS YP_002549324.1 222148367 7386803 1533505..1534125 1 NC_011989.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1534125 rplD 7386803 rplD Agrobacterium vitis S4 50S ribosomal protein L4 YP_002549324.1 1533505 D 311402 CDS YP_002549325.1 222148368 7386804 1534122..1534415 1 NC_011989.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1534415 rplW 7386804 rplW Agrobacterium vitis S4 50S ribosomal protein L23 YP_002549325.1 1534122 D 311402 CDS YP_002549326.1 222148369 7386805 1534427..1535263 1 NC_011989.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1535263 rplB 7386805 rplB Agrobacterium vitis S4 50S ribosomal protein L2 YP_002549326.1 1534427 D 311402 CDS YP_002549327.1 222148370 7386806 1535279..1535557 1 NC_011989.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1535557 rpsS 7386806 rpsS Agrobacterium vitis S4 30S ribosomal protein S19 YP_002549327.1 1535279 D 311402 CDS YP_002549328.1 222148371 7386807 1535560..1535949 1 NC_011989.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1535949 rplV 7386807 rplV Agrobacterium vitis S4 50S ribosomal protein L22 YP_002549328.1 1535560 D 311402 CDS YP_002549329.1 222148372 7386808 1535982..1536662 1 NC_011989.1 30S ribosomal protein S3 1536662 rpsC 7386808 rpsC Agrobacterium vitis S4 30S ribosomal protein S3 YP_002549329.1 1535982 D 311402 CDS YP_002549330.1 222148373 7386809 1536700..1537113 1 NC_011989.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1537113 rplP 7386809 rplP Agrobacterium vitis S4 50S ribosomal protein L16 YP_002549330.1 1536700 D 311402 CDS YP_002549331.1 222148374 7386810 1537124..1537324 1 NC_011989.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1537324 rpmC 7386810 rpmC Agrobacterium vitis S4 50S ribosomal protein L29 YP_002549331.1 1537124 D 311402 CDS YP_002549332.1 222148375 7386811 1537340..1537576 1 NC_011989.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1537576 rpsQ 7386811 rpsQ Agrobacterium vitis S4 30S ribosomal protein S17 YP_002549332.1 1537340 D 311402 CDS YP_002549333.1 222148376 7386812 1537810..1538178 1 NC_011989.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1538178 rplN 7386812 rplN Agrobacterium vitis S4 50S ribosomal protein L14 YP_002549333.1 1537810 D 311402 CDS YP_002549334.1 222148377 7386813 1538194..1538502 1 NC_011989.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1538502 rplX 7386813 rplX Agrobacterium vitis S4 50S ribosomal protein L24 YP_002549334.1 1538194 D 311402 CDS YP_002549335.1 222148378 7386814 1538495..1539052 1 NC_011989.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1539052 rplE 7386814 rplE Agrobacterium vitis S4 50S ribosomal protein L5 YP_002549335.1 1538495 D 311402 CDS YP_002549336.1 222148379 7386815 1539086..1539391 1 NC_011989.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1539391 rpsN 7386815 rpsN Agrobacterium vitis S4 30S ribosomal protein S14 YP_002549336.1 1539086 D 311402 CDS YP_002549337.1 222148380 7386816 1539404..1539802 1 NC_011989.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1539802 rpsH 7386816 rpsH Agrobacterium vitis S4 30S ribosomal protein S8 YP_002549337.1 1539404 D 311402 CDS YP_002549338.1 222148381 7386817 1539845..1540378 1 NC_011989.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1540378 rplF 7386817 rplF Agrobacterium vitis S4 50S ribosomal protein L6 YP_002549338.1 1539845 D 311402 CDS YP_002549339.1 222148382 7386818 1540391..1540753 1 NC_011989.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1540753 rplR 7386818 rplR Agrobacterium vitis S4 50S ribosomal protein L18 YP_002549339.1 1540391 D 311402 CDS YP_002549340.1 222148383 7386819 1540899..1541468 1 NC_011989.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1541468 rpsE 7386819 rpsE Agrobacterium vitis S4 30S ribosomal protein S5 YP_002549340.1 1540899 D 311402 CDS YP_002549341.1 222148384 7386820 1541480..1541683 1 NC_011989.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1541683 rpmD 7386820 rpmD Agrobacterium vitis S4 50S ribosomal protein L30 YP_002549341.1 1541480 D 311402 CDS YP_002549342.1 222148385 7386821 1541700..1542179 1 NC_011989.1 late assembly protein; 50S ribosomal protein L15 1542179 rplO 7386821 rplO Agrobacterium vitis S4 50S ribosomal protein L15 YP_002549342.1 1541700 D 311402 CDS YP_002549343.1 222148386 7386822 1542521..1543861 1 NC_011989.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1543861 secY 7386822 secY Agrobacterium vitis S4 preprotein translocase subunit SecY YP_002549343.1 1542521 D 311402 CDS YP_002549344.1 222148387 7386823 1543858..1544508 1 NC_011989.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1544508 adk 7386823 adk Agrobacterium vitis S4 adenylate kinase YP_002549344.1 1543858 D 311402 CDS YP_002549345.1 222148388 7386824 1544738..1545106 1 NC_011989.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1545106 rpsM 7386824 rpsM Agrobacterium vitis S4 30S ribosomal protein S13 YP_002549345.1 1544738 D 311402 CDS YP_002549346.1 222148389 7386825 1545239..1545628 1 NC_011989.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1545628 rpsK 7386825 rpsK Agrobacterium vitis S4 30S ribosomal protein S11 YP_002549346.1 1545239 D 311402 CDS YP_002549347.1 222148390 7386826 1545728..1546738 1 NC_011989.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1546738 rpoA 7386826 rpoA Agrobacterium vitis S4 DNA-directed RNA polymerase subunit alpha YP_002549347.1 1545728 D 311402 CDS YP_002549348.1 222148391 7386827 1546858..1547283 1 NC_011989.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1547283 rplQ 7386827 rplQ Agrobacterium vitis S4 50S ribosomal protein L17 YP_002549348.1 1546858 D 311402 CDS YP_002549349.1 222148392 7387189 1547496..1548590 1 NC_011989.1 Purine nucleoside permease 1548590 7387189 Avi_1872 Agrobacterium vitis S4 Purine nucleoside permease YP_002549349.1 1547496 D 311402 CDS YP_002549350.1 222148393 7387191 1549719..1550102 1 NC_011989.1 hypothetical protein 1550102 7387191 Avi_1875 Agrobacterium vitis S4 hypothetical protein YP_002549350.1 1549719 D 311402 CDS YP_002549351.1 222148394 7387192 complement(1550227..1551660) 1 NC_011989.1 thiosulfate sulfurtransferase 1551660 7387192 Avi_1877 Agrobacterium vitis S4 thiosulfate sulfurtransferase YP_002549351.1 1550227 R 311402 CDS YP_002549352.1 222148395 7387193 complement(1551678..1552415) 1 NC_011989.1 alanyl-tRNA synthetase 1552415 alaS 7387193 alaS Agrobacterium vitis S4 alanyl-tRNA synthetase YP_002549352.1 1551678 R 311402 CDS YP_002549353.1 222148396 7387194 complement(1552421..1553458) 1 NC_011989.1 cysteine synthase 1553458 cysK 7387194 cysK Agrobacterium vitis S4 cysteine synthase YP_002549353.1 1552421 R 311402 CDS YP_002549354.1 222148397 7387195 complement(1553603..1555054) 1 NC_011989.1 DNA photolyase 1555054 7387195 Avi_1880 Agrobacterium vitis S4 DNA photolyase YP_002549354.1 1553603 R 311402 CDS YP_002549355.1 222148398 7387196 complement(1555565..1556857) 1 NC_011989.1 membrane protein associated metalloendopeptidase 1556857 7387196 Avi_1882 Agrobacterium vitis S4 membrane protein associated metalloendopeptidase YP_002549355.1 1555565 R 311402 CDS YP_002549356.1 222148399 7387197 complement(1556998..1557780) 1 NC_011989.1 hypothetical protein 1557780 7387197 Avi_1883 Agrobacterium vitis S4 hypothetical protein YP_002549356.1 1556998 R 311402 CDS YP_002549357.1 222148400 7387198 complement(1557882..1558355) 1 NC_011989.1 bacterioferritin comigratory protein 1558355 bcp 7387198 bcp Agrobacterium vitis S4 bacterioferritin comigratory protein YP_002549357.1 1557882 R 311402 CDS YP_002549358.1 222148401 7387199 1558576..1562001 1 NC_011989.1 hypothetical protein 1562001 7387199 Avi_1887 Agrobacterium vitis S4 hypothetical protein YP_002549358.1 1558576 D 311402 CDS YP_002549359.1 222148402 7387200 complement(1562062..1563234) 1 NC_011989.1 hypothetical protein 1563234 7387200 Avi_1888 Agrobacterium vitis S4 hypothetical protein YP_002549359.1 1562062 R 311402 CDS YP_002549360.1 222148403 7387201 complement(1563426..1564070) 1 NC_011989.1 autoinducer synthesis protein 1564070 avsI 7387201 avsI Agrobacterium vitis S4 autoinducer synthesis protein YP_002549360.1 1563426 R 311402 CDS YP_002549361.1 222148404 7387202 complement(1564371..1565111) 1 NC_011989.1 transcriptional regulator LuxR family 1565111 avsR 7387202 avsR Agrobacterium vitis S4 transcriptional regulator LuxR family YP_002549361.1 1564371 R 311402 CDS YP_002549362.1 222148405 7387203 complement(1565458..1567764) 1 NC_011989.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 1567764 maeB 7387203 maeB Agrobacterium vitis S4 malic enzyme YP_002549362.1 1565458 R 311402 CDS YP_002549363.1 222148406 7387204 1567946..1568806 1 NC_011989.1 hypothetical protein 1568806 7387204 Avi_1892 Agrobacterium vitis S4 hypothetical protein YP_002549363.1 1567946 D 311402 CDS YP_002549364.1 222148407 7387205 1568994..1570124 1 NC_011989.1 ABC transporter permease 1570124 7387205 Avi_1893 Agrobacterium vitis S4 ABC transporter permease YP_002549364.1 1568994 D 311402 CDS YP_002549365.1 222148408 7387206 1570149..1571009 1 NC_011989.1 ABC transporter ATPase 1571009 7387206 Avi_1894 Agrobacterium vitis S4 ABC transporter ATPase YP_002549365.1 1570149 D 311402 CDS YP_002549366.1 222148409 7387207 1571016..1572383 1 NC_011989.1 ABC transporter substrate-binding protein 1572383 7387207 Avi_1895 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002549366.1 1571016 D 311402 CDS YP_002549367.1 222148410 7387208 1572413..1573027 1 NC_011989.1 hypothetical protein 1573027 7387208 Avi_1896 Agrobacterium vitis S4 hypothetical protein YP_002549367.1 1572413 D 311402 CDS YP_002549368.1 222148411 7387209 complement(1573046..1574470) 1 NC_011989.1 GntR family transcriptional regulator 1574470 7387209 Avi_1897 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002549368.1 1573046 R 311402 CDS YP_002549369.1 222148412 7387210 complement(1574922..1575479) 1 NC_011989.1 hypothetical protein 1575479 7387210 Avi_1898 Agrobacterium vitis S4 hypothetical protein YP_002549369.1 1574922 R 311402 CDS YP_002549370.1 222148413 7387211 complement(1575630..1575974) 1 NC_011989.1 hypothetical protein 1575974 7387211 Avi_1901 Agrobacterium vitis S4 hypothetical protein YP_002549370.1 1575630 R 311402 CDS YP_002549371.1 222148414 7387212 complement(1576061..1576735) 1 NC_011989.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1576735 purQ 7387212 purQ Agrobacterium vitis S4 phosphoribosylformylglycinamidine synthase I YP_002549371.1 1576061 R 311402 CDS YP_002549372.1 222148415 7387213 complement(1576932..1577174) 1 NC_011989.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 1577174 purS 7387213 purS Agrobacterium vitis S4 phosphoribosylformylglycinamidine synthase subunit PurS YP_002549372.1 1576932 R 311402 CDS YP_002549373.1 222148416 7387214 complement(1577191..1577955) 1 NC_011989.1 phosphoribosylaminoimidazole-succinocarboxamide synthase 1577955 purC 7387214 purC Agrobacterium vitis S4 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002549373.1 1577191 R 311402 CDS YP_002549374.1 222148417 7387215 complement(1578251..1578811) 1 NC_011989.1 hypothetical protein 1578811 7387215 Avi_1908 Agrobacterium vitis S4 hypothetical protein YP_002549374.1 1578251 R 311402 CDS YP_002549375.1 222148418 7387216 1578954..1580624 1 NC_011989.1 hypothetical protein 1580624 7387216 Avi_1909 Agrobacterium vitis S4 hypothetical protein YP_002549375.1 1578954 D 311402 CDS YP_002549376.1 222148419 7387217 1581106..1582347 1 NC_011989.1 GGDEF family protein 1582347 7387217 Avi_1910 Agrobacterium vitis S4 GGDEF family protein YP_002549376.1 1581106 D 311402 CDS YP_002549377.1 222148420 7387218 complement(1582458..1583081) 1 NC_011989.1 glutathione S-transferase 1583081 gst 7387218 gst Agrobacterium vitis S4 glutathione S-transferase YP_002549377.1 1582458 R 311402 CDS YP_002549378.1 222148421 7387219 complement(1583284..1584498) 1 NC_011989.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1584498 icdA 7387219 icdA Agrobacterium vitis S4 isocitrate dehydrogenase YP_002549378.1 1583284 R 311402 CDS YP_002549379.1 222148422 7387220 1584721..1585581 1 NC_011989.1 tRNA/rRNA methyltransferase 1585581 lasT 7387220 lasT Agrobacterium vitis S4 tRNA/rRNA methyltransferase YP_002549379.1 1584721 D 311402 CDS YP_002549380.1 222148423 7387221 1585562..1586371 1 NC_011989.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1586371 murI 7387221 murI Agrobacterium vitis S4 glutamate racemase YP_002549380.1 1585562 D 311402 CDS YP_002549381.1 222148424 7387222 complement(1586402..1586884) 1 NC_011989.1 hypothetical protein 1586884 7387222 Avi_1917 Agrobacterium vitis S4 hypothetical protein YP_002549381.1 1586402 R 311402 CDS YP_002549382.1 222148425 7387223 1587694..1588986 1 NC_011989.1 hemolysin 1588986 tlyC 7387223 tlyC Agrobacterium vitis S4 hemolysin YP_002549382.1 1587694 D 311402 CDS YP_002549383.1 222148426 7387224 1589063..1590643 1 NC_011989.1 hypothetical protein 1590643 7387224 Avi_1920 Agrobacterium vitis S4 hypothetical protein YP_002549383.1 1589063 D 311402 CDS YP_002549384.1 222148427 7387225 1590700..1591683 1 NC_011989.1 hypothetical protein 1591683 7387225 Avi_1921 Agrobacterium vitis S4 hypothetical protein YP_002549384.1 1590700 D 311402 CDS YP_002549385.1 222148428 7387226 complement(1591730..1592965) 1 NC_011989.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1592965 7387226 Avi_1922 Agrobacterium vitis S4 peptidase T YP_002549385.1 1591730 R 311402 CDS YP_002549386.1 222148429 7387227 1593763..1594467 1 NC_011989.1 Carbonic anhydrase 1594467 7387227 Avi_1923 Agrobacterium vitis S4 Carbonic anhydrase YP_002549386.1 1593763 D 311402 CDS YP_002549387.1 222148430 7387228 1594472..1595998 1 NC_011989.1 hypothetical protein 1595998 7387228 Avi_1925 Agrobacterium vitis S4 hypothetical protein YP_002549387.1 1594472 D 311402 CDS YP_002549388.1 222148431 7387229 complement(1596080..1597138) 1 NC_011989.1 transporter 1597138 7387229 Avi_1926 Agrobacterium vitis S4 transporter YP_002549388.1 1596080 R 311402 CDS YP_002549389.1 222148432 7387230 1597402..1598019 1 NC_011989.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1598019 rpsD 7387230 rpsD Agrobacterium vitis S4 30S ribosomal protein S4 YP_002549389.1 1597402 D 311402 CDS YP_002549390.1 222148433 7387231 1598175..1599101 1 NC_011989.1 catalyzes the formation of glutamate from glutamine; glutaminase 1599101 glsA 7387231 glsA Agrobacterium vitis S4 glutaminase YP_002549390.1 1598175 D 311402 CDS YP_002549391.1 222148434 7387232 1599254..1600036 1 NC_011989.1 hypothetical protein 1600036 7387232 Avi_1930 Agrobacterium vitis S4 hypothetical protein YP_002549391.1 1599254 D 311402 CDS YP_002549392.1 222148435 7387233 1600133..1601020 1 NC_011989.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 1601020 7387233 Avi_1931 Agrobacterium vitis S4 C32 tRNA thiolase YP_002549392.1 1600133 D 311402 CDS YP_002549393.1 222148436 7387234 1601064..1601900 1 NC_011989.1 inositol monophosphatase family protein 1601900 7387234 Avi_1933 Agrobacterium vitis S4 inositol monophosphatase family protein YP_002549393.1 1601064 D 311402 CDS YP_002549394.1 222148437 7387235 1601928..1602749 1 NC_011989.1 inositol monophosphatase family protein 1602749 7387235 Avi_1934 Agrobacterium vitis S4 inositol monophosphatase family protein YP_002549394.1 1601928 D 311402 CDS YP_002549395.1 222148438 7387236 complement(1602823..1604028) 1 NC_011989.1 MFS permease 1604028 7387236 Avi_1935 Agrobacterium vitis S4 MFS permease YP_002549395.1 1602823 R 311402 CDS YP_002549396.1 222148439 7387237 complement(1604286..1604621) 1 NC_011989.1 glutaredoxin-related protein 1604621 grlA 7387237 grlA Agrobacterium vitis S4 glutaredoxin-related protein YP_002549396.1 1604286 R 311402 CDS YP_002549397.1 222148440 7387238 complement(1604939..1605175) 1 NC_011989.1 BolA/YrbA family protein 1605175 7387238 Avi_1939 Agrobacterium vitis S4 BolA/YrbA family protein YP_002549397.1 1604939 R 311402 CDS YP_002549398.1 222148441 7387239 complement(1605214..1607451) 1 NC_011989.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1607451 purL 7387239 purL Agrobacterium vitis S4 phosphoribosylformylglycinamidine synthase II YP_002549398.1 1605214 R 311402 CDS YP_002549399.1 222148442 7387240 1607799..1608410 1 NC_011989.1 molecular chaperone DnaJ family 1608410 dnaJ 7387240 dnaJ Agrobacterium vitis S4 molecular chaperone DnaJ family YP_002549399.1 1607799 D 311402 CDS YP_002549400.1 222148443 7387241 1608993..1609625 1 NC_011989.1 transcriptional regulator protein 1609625 7387241 Avi_1947 Agrobacterium vitis S4 transcriptional regulator protein YP_002549400.1 1608993 D 311402 CDS YP_002549401.1 222148444 7387242 complement(1609647..1610378) 1 NC_011989.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1610378 lipB 7387242 lipB Agrobacterium vitis S4 lipoate-protein ligase B YP_002549401.1 1609647 R 311402 CDS YP_002549402.1 222148445 7388008 1611291..1612052 1 NC_011989.1 polysialic acid transport protein 1612052 7388008 Avi_1950 Agrobacterium vitis S4 polysialic acid transport protein YP_002549402.1 1611291 D 311402 CDS YP_002549403.1 222148446 7387244 complement(1612077..1613108) 1 NC_011989.1 phage-related integrase 1613108 intD 7387244 intD Agrobacterium vitis S4 phage-related integrase YP_002549403.1 1612077 R 311402 CDS YP_002549404.1 222148447 7387245 complement(1614155..1615162) 1 NC_011989.1 hypothetical protein 1615162 7387245 Avi_1952 Agrobacterium vitis S4 hypothetical protein YP_002549404.1 1614155 R 311402 CDS YP_002549405.1 222148448 7387246 complement(1615576..1616190) 1 NC_011989.1 Phage repressor protein 1616190 7387246 Avi_1954 Agrobacterium vitis S4 Phage repressor protein YP_002549405.1 1615576 R 311402 CDS YP_002549406.1 222148449 7387247 1616745..1617242 1 NC_011989.1 hypothetical protein 1617242 7387247 Avi_1955 Agrobacterium vitis S4 hypothetical protein YP_002549406.1 1616745 D 311402 CDS YP_002549407.1 222148450 7387248 1617561..1618121 1 NC_011989.1 hypothetical protein 1618121 7387248 Avi_1959 Agrobacterium vitis S4 hypothetical protein YP_002549407.1 1617561 D 311402 CDS YP_002549408.1 222148451 7387249 1618118..1618411 1 NC_011989.1 hypothetical protein 1618411 7387249 Avi_1961 Agrobacterium vitis S4 hypothetical protein YP_002549408.1 1618118 D 311402 CDS YP_002549409.1 222148452 7387250 1618408..1619691 1 NC_011989.1 hypothetical protein 1619691 7387250 Avi_1963 Agrobacterium vitis S4 hypothetical protein YP_002549409.1 1618408 D 311402 CDS YP_002549410.1 222148453 7387251 1619678..1620334 1 NC_011989.1 Transcription antiterminator protein 1620334 7387251 Avi_1964 Agrobacterium vitis S4 Transcription antiterminator protein YP_002549410.1 1619678 D 311402 CDS YP_002549411.1 222148454 7387252 1621003..1621470 1 NC_011989.1 Phage terminase 1621470 7387252 Avi_1966 Agrobacterium vitis S4 Phage terminase YP_002549411.1 1621003 D 311402 CDS YP_002549412.1 222148455 7387253 1621454..1623268 1 NC_011989.1 Phage terminase 1623268 7387253 Avi_1967 Agrobacterium vitis S4 Phage terminase YP_002549412.1 1621454 D 311402 CDS YP_002549413.1 222148456 7387254 1623281..1624588 1 NC_011989.1 hypothetical protein 1624588 7387254 Avi_1968 Agrobacterium vitis S4 hypothetical protein YP_002549413.1 1623281 D 311402 CDS YP_002549414.1 222148457 7387255 1624563..1625159 1 NC_011989.1 prohead protease 1625159 7387255 Avi_1969 Agrobacterium vitis S4 prohead protease YP_002549414.1 1624563 D 311402 CDS YP_002549415.1 222148458 7387256 1625195..1626472 1 NC_011989.1 major capsid-like protein 1626472 7387256 Avi_1970 Agrobacterium vitis S4 major capsid-like protein YP_002549415.1 1625195 D 311402 CDS YP_002549416.1 222148459 7387257 1626811..1627359 1 NC_011989.1 hypothetical protein 1627359 7387257 Avi_1973 Agrobacterium vitis S4 hypothetical protein YP_002549416.1 1626811 D 311402 CDS YP_002549417.1 222148460 7387258 1627890..1628351 1 NC_011989.1 hypothetical protein 1628351 7387258 Avi_1977 Agrobacterium vitis S4 hypothetical protein YP_002549417.1 1627890 D 311402 CDS YP_002549418.1 222148461 7387259 1628348..1628755 1 NC_011989.1 hypothetical protein 1628755 7387259 Avi_1978 Agrobacterium vitis S4 hypothetical protein YP_002549418.1 1628348 D 311402 CDS YP_002549419.1 222148462 7387260 1628782..1629225 1 NC_011989.1 hypothetical protein 1629225 7387260 Avi_1979 Agrobacterium vitis S4 hypothetical protein YP_002549419.1 1628782 D 311402 CDS YP_002549420.1 222148463 7387261 complement(1629965..1630828) 1 NC_011989.1 glucose-1-phosphate thymidylyltransferase 1630828 rfbA 7387261 rfbA Agrobacterium vitis S4 glucose-1-phosphate thymidylyltransferase YP_002549420.1 1629965 R 311402 CDS YP_002549421.1 222148464 7387262 complement(1630906..1631811) 1 NC_011989.1 dTDP-4-dehydrorhamnose reductase 1631811 rfbD 7387262 rfbD Agrobacterium vitis S4 dTDP-4-dehydrorhamnose reductase YP_002549421.1 1630906 R 311402 CDS YP_002549422.1 222148465 7387263 complement(1631808..1632866) 1 NC_011989.1 dTDP-glucose 4,6-dehydratase 1632866 rfbB 7387263 rfbB Agrobacterium vitis S4 dTDP-glucose 4,6-dehydratase YP_002549422.1 1631808 R 311402 CDS YP_002549423.1 222148466 7387264 complement(1632921..1633484) 1 NC_011989.1 dTDP-4-dehydrorhamnose 3,5-epimerase 1633484 rfbC 7387264 rfbC Agrobacterium vitis S4 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002549423.1 1632921 R 311402 CDS YP_002549424.1 222148467 7387265 complement(1633668..1633850) 1 NC_011989.1 endo-polygalacturonase precursor protein 1633850 7387265 Avi_1989 Agrobacterium vitis S4 endo-polygalacturonase precursor protein YP_002549424.1 1633668 R 311402 CDS YP_002549425.1 222148468 7387266 1633917..1636664 1 NC_011989.1 tail component of prophage protein 1636664 7387266 Avi_1990 Agrobacterium vitis S4 tail component of prophage protein YP_002549425.1 1633917 D 311402 CDS YP_002549426.1 222148469 7387267 1636661..1637287 1 NC_011989.1 hypothetical protein 1637287 7387267 Avi_1991 Agrobacterium vitis S4 hypothetical protein YP_002549426.1 1636661 D 311402 CDS YP_002549427.1 222148470 7387268 1637287..1637973 1 NC_011989.1 hypothetical protein 1637973 7387268 Avi_1992 Agrobacterium vitis S4 hypothetical protein YP_002549427.1 1637287 D 311402 CDS YP_002549428.1 222148471 7387269 1638261..1642955 1 NC_011989.1 phage tail fiber protein 1642955 7387269 Avi_1994 Agrobacterium vitis S4 phage tail fiber protein YP_002549428.1 1638261 D 311402 CDS YP_002549429.1 222148472 7387270 1642952..1644448 1 NC_011989.1 hypothetical protein 1644448 7387270 Avi_1995 Agrobacterium vitis S4 hypothetical protein YP_002549429.1 1642952 D 311402 CDS YP_002549430.1 222148473 7387271 1644464..1645069 1 NC_011989.1 hypothetical protein 1645069 7387271 Avi_1996 Agrobacterium vitis S4 hypothetical protein YP_002549430.1 1644464 D 311402 CDS YP_002549431.1 222148474 7387757 complement(1645317..1645676) 1 NC_011989.1 hypothetical protein 1645676 7387757 Avi_1998 Agrobacterium vitis S4 hypothetical protein YP_002549431.1 1645317 R 311402 CDS YP_002549432.1 222148475 7386830 complement(1645680..1645931) 1 NC_011989.1 hypothetical protein 1645931 7386830 Avi_2000 Agrobacterium vitis S4 hypothetical protein YP_002549432.1 1645680 R 311402 CDS YP_002549433.1 222148476 7386831 1646008..1646625 1 NC_011989.1 hypothetical protein 1646625 7386831 Avi_2001 Agrobacterium vitis S4 hypothetical protein YP_002549433.1 1646008 D 311402 CDS YP_002549434.1 222148477 7386832 1646861..1647298 1 NC_011989.1 HlyD family secretion protein 1647298 7386832 Avi_2003 Agrobacterium vitis S4 HlyD family secretion protein YP_002549434.1 1646861 D 311402 CDS YP_002549435.1 222148478 7386833 1647482..1647868 1 NC_011989.1 hypothetical protein 1647868 7386833 Avi_2005 Agrobacterium vitis S4 hypothetical protein YP_002549435.1 1647482 D 311402 CDS YP_002549436.1 222148479 7386834 complement(1647964..1649505) 1 NC_011989.1 hypothetical protein 1649505 7386834 Avi_2007 Agrobacterium vitis S4 hypothetical protein YP_002549436.1 1647964 R 311402 CDS YP_002549437.1 222148480 7386835 complement(1649513..1651945) 1 NC_011989.1 glycosyl transferase 1651945 7386835 Avi_2009 Agrobacterium vitis S4 glycosyl transferase YP_002549437.1 1649513 R 311402 CDS YP_002549438.1 222148481 7386836 complement(1652280..1654316) 1 NC_011989.1 hypothetical protein 1654316 7386836 Avi_2010 Agrobacterium vitis S4 hypothetical protein YP_002549438.1 1652280 R 311402 CDS YP_002549439.1 222148482 7386837 complement(1655088..1656101) 1 NC_011989.1 transposase 1656101 7386837 Avi_2012 Agrobacterium vitis S4 transposase YP_002549439.1 1655088 R 311402 CDS YP_002549440.1 222148483 7386838 1656524..1656787 1 NC_011989.1 plasmid stable inheritance protein I 1656787 pemI 7386838 pemI Agrobacterium vitis S4 plasmid stable inheritance protein I YP_002549440.1 1656524 D 311402 CDS YP_002549441.1 222148484 7387968 1656784..1657146 1 NC_011989.1 plasmid stable inheritance protein K 1657146 pemK 7387968 pemK Agrobacterium vitis S4 plasmid stable inheritance protein K YP_002549441.1 1656784 D 311402 CDS YP_002549442.1 222148485 7387969 complement(1657659..1658366) 1 NC_011989.1 hypothetical protein 1658366 7387969 Avi_2013 Agrobacterium vitis S4 hypothetical protein YP_002549442.1 1657659 R 311402 CDS YP_002549443.1 222148486 7386839 complement(1658370..1658567) 1 NC_011989.1 hypothetical protein 1658567 7386839 Avi_2014 Agrobacterium vitis S4 hypothetical protein YP_002549443.1 1658370 R 311402 CDS YP_002549444.1 222148487 7386840 complement(1658577..1659356) 1 NC_011989.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 1659356 cobS 7386840 cobS Agrobacterium vitis S4 cobalamin synthase YP_002549444.1 1658577 R 311402 CDS YP_002549445.1 222148488 7386841 1659670..1660692 1 NC_011989.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1660692 cobT 7386841 cobT Agrobacterium vitis S4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_002549445.1 1659670 D 311402 CDS YP_002549446.1 222148489 7386842 1660676..1661125 1 NC_011989.1 diacylglycerol kinase 1661125 dgk 7386842 dgk Agrobacterium vitis S4 diacylglycerol kinase YP_002549446.1 1660676 D 311402 CDS YP_002549447.1 222148490 7386843 1661157..1661399 1 NC_011989.1 hypothetical protein 1661399 7386843 Avi_2021 Agrobacterium vitis S4 hypothetical protein YP_002549447.1 1661157 D 311402 CDS YP_002549448.1 222148491 7386844 1661670..1661987 1 NC_011989.1 hypothetical protein 1661987 7386844 Avi_2022 Agrobacterium vitis S4 hypothetical protein YP_002549448.1 1661670 D 311402 CDS YP_002549449.1 222148492 7386845 1662142..1663575 1 NC_011989.1 Carbohydrate-selective porin protein 1663575 7386845 Avi_2023 Agrobacterium vitis S4 Carbohydrate-selective porin protein YP_002549449.1 1662142 D 311402 CDS YP_002549450.1 222148493 7386846 complement(1663630..1664217) 1 NC_011989.1 hypothetical protein 1664217 7386846 Avi_2024 Agrobacterium vitis S4 hypothetical protein YP_002549450.1 1663630 R 311402 CDS YP_002549451.1 222148494 7386847 complement(1664245..1664745) 1 NC_011989.1 peptide deformylase 1664745 def 7386847 def Agrobacterium vitis S4 peptide deformylase YP_002549451.1 1664245 R 311402 CDS YP_002549452.1 222148495 7386848 complement(1664764..1665489) 1 NC_011989.1 transcriptional activator Crp family 1665489 fnrN 7386848 fnrN Agrobacterium vitis S4 transcriptional activator Crp family YP_002549452.1 1664764 R 311402 CDS YP_002549453.1 222148496 7386849 1665809..1667161 1 NC_011989.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1667161 hemN 7386849 hemN Agrobacterium vitis S4 coproporphyrinogen III oxidase YP_002549453.1 1665809 D 311402 CDS YP_002549454.1 222148497 7386850 1667269..1667547 1 NC_011989.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 1667547 acpP 7386850 acpP Agrobacterium vitis S4 acyl carrier protein YP_002549454.1 1667269 D 311402 CDS YP_002549455.1 222148498 7386851 1667630..1668103 1 NC_011989.1 (3R)-hydroxymyristoyl-ACP dehydratase 1668103 7386851 Avi_2030 Agrobacterium vitis S4 (3R)-hydroxymyristoyl-ACP dehydratase YP_002549455.1 1667630 D 311402 CDS YP_002549456.1 222148499 7386852 1668394..1669599 1 NC_011989.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1669599 7386852 Avi_2033 Agrobacterium vitis S4 3-oxoacyl-ACP synthase YP_002549456.1 1668394 D 311402 CDS YP_002549457.1 222148500 7386853 1669610..1670911 1 NC_011989.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 1670911 fabF 7386853 fabF Agrobacterium vitis S4 3-oxoacyl-ACP synthase YP_002549457.1 1669610 D 311402 CDS YP_002549458.1 222148501 7386854 1670988..1672016 1 NC_011989.1 NADPH:quinone reductase 1672016 7386854 Avi_2036 Agrobacterium vitis S4 NADPH:quinone reductase YP_002549458.1 1670988 D 311402 CDS YP_002549459.1 222148502 7386855 1672019..1672951 1 NC_011989.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1672951 msbB 7386855 msbB Agrobacterium vitis S4 lipid A biosynthesis lauroyl acyltransferase YP_002549459.1 1672019 D 311402 CDS YP_002549460.1 222148503 7386856 complement(1672935..1673915) 1 NC_011989.1 hypothetical protein 1673915 7386856 Avi_2038 Agrobacterium vitis S4 hypothetical protein YP_002549460.1 1672935 R 311402 CDS YP_002549461.1 222148504 7386857 1674583..1676262 1 NC_011989.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1676262 nadE 7386857 nadE Agrobacterium vitis S4 NAD synthetase YP_002549461.1 1674583 D 311402 CDS YP_002549462.1 222148505 7386858 1676270..1677103 1 NC_011989.1 periplasmic component of the Tol biopolymer transport system 1677103 tolB 7386858 tolB Agrobacterium vitis S4 periplasmic component of the Tol biopolymer transport system YP_002549462.1 1676270 D 311402 CDS YP_002549463.1 222148506 7386859 1677382..1678068 1 NC_011989.1 nitroreductase 1678068 7386859 Avi_2042 Agrobacterium vitis S4 nitroreductase YP_002549463.1 1677382 D 311402 CDS YP_002549464.1 222148507 7386860 complement(1678146..1678730) 1 NC_011989.1 transcriptional regulatory protein 1678730 7386860 Avi_2043 Agrobacterium vitis S4 transcriptional regulatory protein YP_002549464.1 1678146 R 311402 CDS YP_002549465.1 222148508 7386861 1678862..1679776 1 NC_011989.1 ABC transporter permease 1679776 7386861 Avi_2044 Agrobacterium vitis S4 ABC transporter permease YP_002549465.1 1678862 D 311402 CDS YP_002549466.1 222148509 7386862 1679773..1680279 1 NC_011989.1 methylated-DNA--protein- cysteinemethyltransferase 1680279 ada 7386862 ada Agrobacterium vitis S4 methylated-DNA--protein- cysteinemethyltransferase YP_002549466.1 1679773 D 311402 CDS YP_002549467.1 222148510 7386863 complement(1680361..1681617) 1 NC_011989.1 tyrosyl-tRNA synthetase 1681617 tyrS 7386863 tyrS Agrobacterium vitis S4 tyrosyl-tRNA synthetase YP_002549467.1 1680361 R 311402 CDS YP_002549468.1 222148511 7386864 1681789..1683378 1 NC_011989.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1683378 anmK 7386864 anmK Agrobacterium vitis S4 anhydro-N-acetylmuramic acid kinase YP_002549468.1 1681789 D 311402 CDS YP_002549469.1 222148512 7386865 complement(1683430..1683774) 1 NC_011989.1 hypothetical protein 1683774 7386865 Avi_2049 Agrobacterium vitis S4 hypothetical protein YP_002549469.1 1683430 R 311402 CDS YP_002549470.1 222148513 7387180 1684098..1684409 1 NC_011989.1 hypothetical protein 1684409 7387180 Avi_2050 Agrobacterium vitis S4 hypothetical protein YP_002549470.1 1684098 D 311402 CDS YP_002549471.1 222148514 7386867 complement(1684429..1685964) 1 NC_011989.1 two component sensor kinase 1685964 7386867 Avi_2051 Agrobacterium vitis S4 two component sensor kinase YP_002549471.1 1684429 R 311402 CDS YP_002549472.1 222148515 7386868 1686095..1686610 1 NC_011989.1 succinoglycan biosynthesis protein 1686610 exoI 7386868 exoI Agrobacterium vitis S4 succinoglycan biosynthesis protein YP_002549472.1 1686095 D 311402 CDS YP_002549473.1 222148516 7386869 1686607..1687242 1 NC_011989.1 hypothetical protein 1687242 7386869 Avi_2054 Agrobacterium vitis S4 hypothetical protein YP_002549473.1 1686607 D 311402 CDS YP_002549474.1 222148517 7386870 1687308..1687796 1 NC_011989.1 transcriptional regulator AsnC family 1687796 7386870 Avi_2055 Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002549474.1 1687308 D 311402 CDS YP_002549475.1 222148518 7386871 complement(1687834..1688703) 1 NC_011989.1 3-hydroxyisobutyrate dehydrogenase 1688703 mmsB 7386871 mmsB Agrobacterium vitis S4 3-hydroxyisobutyrate dehydrogenase YP_002549475.1 1687834 R 311402 CDS YP_002549476.1 222148519 7386872 complement(1688809..1689783) 1 NC_011989.1 proline iminopeptidase 1689783 pip 7386872 pip Agrobacterium vitis S4 proline iminopeptidase YP_002549476.1 1688809 R 311402 CDS YP_002549477.1 222148520 7386873 complement(1689805..1690530) 1 NC_011989.1 hypothetical protein 1690530 7386873 Avi_2059 Agrobacterium vitis S4 hypothetical protein YP_002549477.1 1689805 R 311402 CDS YP_002549478.1 222148521 7386874 complement(1690810..1691118) 1 NC_011989.1 usg protein 1691118 usg 7386874 usg Agrobacterium vitis S4 usg protein YP_002549478.1 1690810 R 311402 CDS YP_002549479.1 222148522 7386875 complement(1691310..1692140) 1 NC_011989.1 amino acid ABC transporter permease 1692140 7386875 Avi_2064 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002549479.1 1691310 R 311402 CDS YP_002549480.1 222148523 7386876 complement(1692137..1692940) 1 NC_011989.1 amino acid ABC transporter permease 1692940 7386876 Avi_2065 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002549480.1 1692137 R 311402 CDS YP_002549481.1 222148524 7386877 complement(1693035..1693811) 1 NC_011989.1 amino acid ABC transporter substrate-binding protein 1693811 7386877 Avi_2066 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002549481.1 1693035 R 311402 CDS YP_002549482.1 222148525 7386878 1694076..1696718 1 NC_011989.1 OmpA family protein 1696718 7386878 Avi_2068 Agrobacterium vitis S4 OmpA family protein YP_002549482.1 1694076 D 311402 CDS YP_002549483.1 222148526 7386879 complement(1696766..1697293) 1 NC_011989.1 molybdopterin-guanine dinucleotide biosynthesis protein B 1697293 mobB 7386879 mobB Agrobacterium vitis S4 molybdopterin-guanine dinucleotide biosynthesis protein B YP_002549483.1 1696766 R 311402 CDS YP_002549484.1 222148527 7386880 complement(1697280..1697921) 1 NC_011989.1 molybdopterin-guanine dinucleotide biosynthesis protein A 1697921 mobA 7386880 mobA Agrobacterium vitis S4 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002549484.1 1697280 R 311402 CDS YP_002549485.1 222148528 7386881 complement(1697936..1698829) 1 NC_011989.1 hypothetical protein 1698829 7386881 Avi_2071 Agrobacterium vitis S4 hypothetical protein YP_002549485.1 1697936 R 311402 CDS YP_002549486.1 222148529 7386882 complement(1698932..1699921) 1 NC_011989.1 molybdenum cofactor biosynthesis protein A 1699921 moaA 7386882 moaA Agrobacterium vitis S4 molybdenum cofactor biosynthesis protein A YP_002549486.1 1698932 R 311402 CDS YP_002549487.1 222148530 7386883 1700376..1700741 1 NC_011989.1 hypothetical protein 1700741 7386883 Avi_2074 Agrobacterium vitis S4 hypothetical protein YP_002549487.1 1700376 D 311402 CDS YP_002549488.1 222148531 7386884 complement(1700760..1701764) 1 NC_011989.1 GGDEF protein 1701764 7386884 Avi_2075 Agrobacterium vitis S4 GGDEF protein YP_002549488.1 1700760 R 311402 CDS YP_002549489.1 222148532 7386885 complement(1702011..1703615) 1 NC_011989.1 fumarate hydratase class I 1703615 7386885 Avi_2076 Agrobacterium vitis S4 fumarate hydratase class I YP_002549489.1 1702011 R 311402 CDS YP_002549490.1 222148533 7386886 complement(1703744..1705135) 1 NC_011989.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1705135 fumC 7386886 fumC Agrobacterium vitis S4 fumarate hydratase YP_002549490.1 1703744 R 311402 CDS YP_002549491.1 222148534 7386887 1705531..1707375 1 NC_011989.1 hypothetical protein 1707375 7386887 Avi_2078 Agrobacterium vitis S4 hypothetical protein YP_002549491.1 1705531 D 311402 CDS YP_002549492.1 222148535 7386888 complement(1707442..1708155) 1 NC_011989.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 1708155 gph 7386888 gph Agrobacterium vitis S4 phosphoglycolate phosphatase YP_002549492.1 1707442 R 311402 CDS YP_002549493.1 222148536 7386889 1708377..1709075 1 NC_011989.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1709075 rpiA 7386889 rpiA Agrobacterium vitis S4 ribose-5-phosphate isomerase A YP_002549493.1 1708377 D 311402 CDS YP_002549494.1 222148537 7386890 complement(1709161..1709748) 1 NC_011989.1 hypothetical protein 1709748 7386890 Avi_2083 Agrobacterium vitis S4 hypothetical protein YP_002549494.1 1709161 R 311402 CDS YP_002549495.1 222148538 7386891 1710036..1711424 1 NC_011989.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 1711424 gor 7386891 gor Agrobacterium vitis S4 glutathione reductase YP_002549495.1 1710036 D 311402 CDS YP_002549496.1 222148539 7386892 1711720..1712997 1 NC_011989.1 2-dehydro-3-deoxyphosphoheptonate aldolase 1712997 dhs 7386892 dhs Agrobacterium vitis S4 2-dehydro-3-deoxyphosphoheptonate aldolase YP_002549496.1 1711720 D 311402 CDS YP_002549497.1 222148540 7386893 complement(1713156..1713662) 1 NC_011989.1 hypothetical protein 1713662 7386893 Avi_2088 Agrobacterium vitis S4 hypothetical protein YP_002549497.1 1713156 R 311402 CDS YP_002549498.1 222148541 7386894 1714386..1716035 1 NC_011989.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1716035 ccoN 7386894 ccoN Agrobacterium vitis S4 cbb3-type cytochrome c oxidase subunit I YP_002549498.1 1714386 D 311402 CDS YP_002549499.1 222148542 7386895 1716046..1716777 1 NC_011989.1 cytochrome c oxidase cbb3-type subunit II 1716777 ccoO 7386895 ccoO Agrobacterium vitis S4 cytochrome c oxidase cbb3-type subunit II YP_002549499.1 1716046 D 311402 CDS YP_002549500.1 222148543 7386896 1716752..1716949 1 NC_011989.1 cytochrome c oxidase FixQ chain 1716949 fixQ 7386896 fixQ Agrobacterium vitis S4 cytochrome c oxidase FixQ chain YP_002549500.1 1716752 D 311402 CDS YP_002549501.1 222148544 7386897 1716952..1717815 1 NC_011989.1 cytochrome c oxidase cbb3-type subunit III 1717815 ccoP 7386897 ccoP Agrobacterium vitis S4 cytochrome c oxidase cbb3-type subunit III YP_002549501.1 1716952 D 311402 CDS YP_002549502.1 222148545 7386898 complement(1717933..1718286) 1 NC_011989.1 bleomycin resistance protein 1718286 7386898 Avi_2097 Agrobacterium vitis S4 bleomycin resistance protein YP_002549502.1 1717933 R 311402 CDS YP_002549503.1 222148546 7386899 1718632..1720569 1 NC_011989.1 GGDEF family protein 1720569 7386899 Avi_2098 Agrobacterium vitis S4 GGDEF family protein YP_002549503.1 1718632 D 311402 CDS YP_002549504.1 222148547 7386900 1720710..1723715 1 NC_011989.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1723715 uvrB 7386900 uvrB Agrobacterium vitis S4 excinuclease ABC subunit B YP_002549504.1 1720710 D 311402 CDS YP_002549505.1 222148548 7386901 complement(1724004..1725626) 1 NC_011989.1 gamma-glutamyltransferase 1725626 ggt 7386901 ggt Agrobacterium vitis S4 gamma-glutamyltransferase YP_002549505.1 1724004 R 311402 CDS YP_002549506.1 222148549 7386902 1725811..1727010 1 NC_011989.1 hydrolase 1727010 7386902 Avi_2101 Agrobacterium vitis S4 hydrolase YP_002549506.1 1725811 D 311402 CDS YP_002549507.1 222148550 7386903 1727106..1728326 1 NC_011989.1 aminohydrolase 1728326 7386903 Avi_2102 Agrobacterium vitis S4 aminohydrolase YP_002549507.1 1727106 D 311402 CDS YP_002549508.1 222148551 7386904 1728426..1729106 1 NC_011989.1 hypothetical protein 1729106 7386904 Avi_2104 Agrobacterium vitis S4 hypothetical protein YP_002549508.1 1728426 D 311402 CDS YP_002549509.1 222148552 7386905 1729135..1729986 1 NC_011989.1 hypothetical protein 1729986 7386905 Avi_2106 Agrobacterium vitis S4 hypothetical protein YP_002549509.1 1729135 D 311402 CDS YP_002549510.1 222148553 7386906 1729983..1730837 1 NC_011989.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1730837 kdsA 7386906 kdsA Agrobacterium vitis S4 2-dehydro-3-deoxyphosphooctonate aldolase YP_002549510.1 1729983 D 311402 CDS YP_002549511.1 222148554 7386907 1730924..1732198 1 NC_011989.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1732198 eno 7386907 eno Agrobacterium vitis S4 phosphopyruvate hydratase YP_002549511.1 1730924 D 311402 CDS YP_002549512.1 222148555 7386908 1732380..1732691 1 NC_011989.1 hypothetical protein 1732691 7386908 Avi_2110 Agrobacterium vitis S4 hypothetical protein YP_002549512.1 1732380 D 311402 CDS YP_002549513.1 222148556 7386909 1732893..1733939 1 NC_011989.1 pyruvate dehydrogenase alpha subunit 1733939 pdhA 7386909 pdhA Agrobacterium vitis S4 pyruvate dehydrogenase alpha subunit YP_002549513.1 1732893 D 311402 CDS YP_002549514.1 222148557 7386910 1733960..1735345 1 NC_011989.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 1735345 pdhB 7386910 pdhB Agrobacterium vitis S4 pyruvate dehydrogenase subunit beta YP_002549514.1 1733960 D 311402 CDS YP_002549515.1 222148558 7386911 1735361..1736695 1 NC_011989.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1736695 7386911 Avi_2115 Agrobacterium vitis S4 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_002549515.1 1735361 D 311402 CDS YP_002549516.1 222148559 7387841 1737162..1737800 1 NC_011989.1 methylated-DNA--protein- cysteinemethyltransferase 1737800 ada 7387841 ada Agrobacterium vitis S4 methylated-DNA--protein- cysteinemethyltransferase YP_002549516.1 1737162 D 311402 CDS YP_002549517.1 222148560 7387842 1737898..1738164 1 NC_011989.1 hypothetical protein 1738164 7387842 Avi_2119 Agrobacterium vitis S4 hypothetical protein YP_002549517.1 1737898 D 311402 CDS YP_002549518.1 222148561 7387843 1738242..1739687 1 NC_011989.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1739687 lpdA 7387843 lpdA Agrobacterium vitis S4 dihydrolipoamide dehydrogenase YP_002549518.1 1738242 D 311402 CDS YP_002549519.1 222148562 7387844 1739758..1740006 1 NC_011989.1 hypothetical protein 1740006 7387844 Avi_2122 Agrobacterium vitis S4 hypothetical protein YP_002549519.1 1739758 D 311402 CDS YP_002549520.1 222148563 7387845 1740045..1741016 1 NC_011989.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1741016 lipA 7387845 lipA Agrobacterium vitis S4 lipoyl synthase YP_002549520.1 1740045 D 311402 CDS YP_002549521.1 222148564 7387846 1741098..1741673 1 NC_011989.1 hypothetical protein 1741673 7387846 Avi_2124 Agrobacterium vitis S4 hypothetical protein YP_002549521.1 1741098 D 311402 CDS YP_002549522.1 222148565 7387847 1741676..1742245 1 NC_011989.1 hypothetical protein 1742245 7387847 Avi_2125 Agrobacterium vitis S4 hypothetical protein YP_002549522.1 1741676 D 311402 CDS YP_002549523.1 222148566 7387848 complement(1742263..1743588) 1 NC_011989.1 sugar ABC transporter permease 1743588 7387848 Avi_2127 Agrobacterium vitis S4 sugar ABC transporter permease YP_002549523.1 1742263 R 311402 CDS YP_002549524.1 222148567 7387849 1743832..1744284 1 NC_011989.1 hypothetical protein 1744284 7387849 Avi_2128 Agrobacterium vitis S4 hypothetical protein YP_002549524.1 1743832 D 311402 CDS YP_002549525.1 222148568 7387850 complement(1744269..1745024) 1 NC_011989.1 hypothetical protein 1745024 7387850 Avi_2129 Agrobacterium vitis S4 hypothetical protein YP_002549525.1 1744269 R 311402 CDS YP_002549526.1 222148569 7387851 complement(1745148..1745654) 1 NC_011989.1 competence-damage associated protein 1745654 cinA 7387851 cinA Agrobacterium vitis S4 competence-damage associated protein YP_002549526.1 1745148 R 311402 CDS YP_002549527.1 222148570 7387852 complement(1745651..1746874) 1 NC_011989.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein 1746874 ispDF 7387852 ispDF Agrobacterium vitis S4 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein YP_002549527.1 1745651 R 311402 CDS YP_002549528.1 222148571 7387853 1747040..1748038 1 NC_011989.1 nitrogen regulation protein 1748038 nifR 7387853 nifR Agrobacterium vitis S4 nitrogen regulation protein YP_002549528.1 1747040 D 311402 CDS YP_002549529.1 222148572 7387854 1748035..1749180 1 NC_011989.1 two component sensor kinase 1749180 ntrB 7387854 ntrB Agrobacterium vitis S4 two component sensor kinase YP_002549529.1 1748035 D 311402 CDS YP_002549530.1 222148573 7387855 1749177..1750628 1 NC_011989.1 nitrogen regulation protein NR(I) 1750628 ntrC 7387855 ntrC Agrobacterium vitis S4 nitrogen regulation protein NR(I) YP_002549530.1 1749177 D 311402 CDS YP_002549531.1 222148574 7387856 1750835..1753114 1 NC_011989.1 two component sensor kinase 1753114 ntrY 7387856 ntrY Agrobacterium vitis S4 two component sensor kinase YP_002549531.1 1750835 D 311402 CDS YP_002549532.1 222148575 7387857 1753104..1754468 1 NC_011989.1 two component response regulator 1754468 ntrX 7387857 ntrX Agrobacterium vitis S4 two component response regulator YP_002549532.1 1753104 D 311402 CDS YP_002549533.1 222148576 7387858 1754575..1754904 1 NC_011989.1 RNA chaperone Hfq 1754904 hfq 7387858 hfq Agrobacterium vitis S4 RNA chaperone Hfq YP_002549533.1 1754575 D 311402 CDS YP_002549534.1 222148577 7387859 1755062..1756396 1 NC_011989.1 GTP-binding protein HFLX 1756396 hflx 7387859 hflx Agrobacterium vitis S4 GTP-binding protein HFLX YP_002549534.1 1755062 D 311402 CDS YP_002549535.1 222148578 7387860 complement(1756418..1757488) 1 NC_011989.1 hypothetical protein 1757488 7387860 Avi_2143 Agrobacterium vitis S4 hypothetical protein YP_002549535.1 1756418 R 311402 CDS YP_002549536.1 222148579 7387861 complement(1757700..1758542) 1 NC_011989.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 1758542 mazG 7387861 mazG Agrobacterium vitis S4 nucleoside triphosphate pyrophosphohydrolase YP_002549536.1 1757700 R 311402 CDS YP_002549537.1 222148580 7387862 complement(1758566..1759153) 1 NC_011989.1 hypothetical protein 1759153 7387862 Avi_2145 Agrobacterium vitis S4 hypothetical protein YP_002549537.1 1758566 R 311402 CDS YP_002549538.1 222148581 7387863 1759428..1760885 1 NC_011989.1 siroheme synthase 1760885 cysG 7387863 cysG Agrobacterium vitis S4 siroheme synthase YP_002549538.1 1759428 D 311402 CDS YP_002549539.1 222148582 7387864 1760888..1761202 1 NC_011989.1 hypothetical protein 1761202 7387864 Avi_2147 Agrobacterium vitis S4 hypothetical protein YP_002549539.1 1760888 D 311402 CDS YP_002549540.1 222148583 7387865 1761319..1762992 1 NC_011989.1 sulfite reductase (NADPH) hemoprotein beta-component 1762992 cysI 7387865 cysI Agrobacterium vitis S4 sulfite reductase (NADPH) hemoprotein beta-component YP_002549540.1 1761319 D 311402 CDS YP_002549541.1 222148584 7387866 1763004..1763510 1 NC_011989.1 hypothetical protein 1763510 7387866 Avi_2149 Agrobacterium vitis S4 hypothetical protein YP_002549541.1 1763004 D 311402 CDS YP_002549542.1 222148585 7387867 1763751..1764563 1 NC_011989.1 ferredoxin NADP+ reductase 1764563 mvrA 7387867 mvrA Agrobacterium vitis S4 ferredoxin NADP+ reductase YP_002549542.1 1763751 D 311402 CDS YP_002549543.1 222148586 7387868 1764712..1765416 1 NC_011989.1 3-oxoacyl-ACP reductase 1765416 fabG 7387868 fabG Agrobacterium vitis S4 3-oxoacyl-ACP reductase YP_002549543.1 1764712 D 311402 CDS YP_002549544.1 222148587 7387869 1765636..1766784 1 NC_011989.1 rare lipoprotein A 1766784 rlpA 7387869 rlpA Agrobacterium vitis S4 rare lipoprotein A YP_002549544.1 1765636 D 311402 CDS YP_002549545.1 222148588 7387870 1766928..1768163 1 NC_011989.1 D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein 1768163 dacF 7387870 dacF Agrobacterium vitis S4 D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein YP_002549545.1 1766928 D 311402 CDS YP_002549546.1 222148589 7387871 1768385..1769050 1 NC_011989.1 thymidylate kinase 1769050 tmk 7387871 tmk Agrobacterium vitis S4 thymidylate kinase YP_002549546.1 1768385 D 311402 CDS YP_002549547.1 222148590 7387872 1769034..1770074 1 NC_011989.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1770074 holB 7387872 holB Agrobacterium vitis S4 DNA polymerase III subunit delta' YP_002549547.1 1769034 D 311402 CDS YP_002549548.1 222148591 7387873 complement(1770082..1770852) 1 NC_011989.1 permease 1770852 7387873 Avi_2157 Agrobacterium vitis S4 permease YP_002549548.1 1770082 R 311402 CDS YP_002549549.1 222148592 7387874 1771057..1772634 1 NC_011989.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1772634 metS 7387874 metS Agrobacterium vitis S4 methionyl-tRNA synthetase YP_002549549.1 1771057 D 311402 CDS YP_002549550.1 222148593 7387875 1772734..1773420 1 NC_011989.1 hypothetical protein 1773420 7387875 Avi_2159 Agrobacterium vitis S4 hypothetical protein YP_002549550.1 1772734 D 311402 CDS YP_002549551.1 222148594 7387876 1773428..1774246 1 NC_011989.1 metal dependent hydrolase 1774246 7387876 Avi_2160 Agrobacterium vitis S4 metal dependent hydrolase YP_002549551.1 1773428 D 311402 CDS YP_002549552.1 222148595 7387877 1774281..1776065 1 NC_011989.1 chloride channel protein 1776065 clc 7387877 clc Agrobacterium vitis S4 chloride channel protein YP_002549552.1 1774281 D 311402 CDS YP_002549553.1 222148596 7387179 1776379..1777125 1 NC_011989.1 cytochrome c-type biogenesis protein 1777125 ccdA 7387179 ccdA Agrobacterium vitis S4 cytochrome c-type biogenesis protein YP_002549553.1 1776379 D 311402 CDS YP_002549554.1 222148597 7387879 complement(1777150..1778358) 1 NC_011989.1 2-octaprenyl-6-methoxyphenyl hydroxylase 1778358 ubiH 7387879 ubiH Agrobacterium vitis S4 2-octaprenyl-6-methoxyphenyl hydroxylase YP_002549554.1 1777150 R 311402 CDS YP_002549555.1 222148598 7387880 1778556..1779281 1 NC_011989.1 phosphatidylcholine synthase 1779281 pcs 7387880 pcs Agrobacterium vitis S4 phosphatidylcholine synthase YP_002549555.1 1778556 D 311402 CDS YP_002549556.1 222148599 7387881 1779451..1781049 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (sugar) 1781049 7387881 Avi_2166 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002549556.1 1779451 D 311402 CDS YP_002549557.1 222148600 7387882 1781033..1782136 1 NC_011989.1 sugar ABC transporter permease 1782136 7387882 Avi_2167 Agrobacterium vitis S4 sugar ABC transporter permease YP_002549557.1 1781033 D 311402 CDS YP_002549558.1 222148601 7387883 1782133..1783050 1 NC_011989.1 sugar ABC transporter permease 1783050 7387883 Avi_2168 Agrobacterium vitis S4 sugar ABC transporter permease YP_002549558.1 1782133 D 311402 CDS YP_002549559.1 222148602 7387884 1783104..1784177 1 NC_011989.1 lipoprotein 1784177 7387884 Avi_2169 Agrobacterium vitis S4 lipoprotein YP_002549559.1 1783104 D 311402 CDS YP_002549560.1 222148603 7387885 1784291..1785649 1 NC_011989.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1785649 glmU 7387885 glmU Agrobacterium vitis S4 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_002549560.1 1784291 D 311402 CDS YP_002549561.1 222148604 7387886 1785821..1787647 1 NC_011989.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1787647 glmS 7387886 glmS Agrobacterium vitis S4 glucosamine--fructose-6-phosphate aminotransferase YP_002549561.1 1785821 D 311402 CDS YP_002549562.1 222148605 7387887 1787764..1788471 1 NC_011989.1 hypothetical protein 1788471 7387887 Avi_2172 Agrobacterium vitis S4 hypothetical protein YP_002549562.1 1787764 D 311402 CDS YP_002549563.1 222148606 7387888 1788629..1790104 1 NC_011989.1 hypothetical protein 1790104 7387888 Avi_2173 Agrobacterium vitis S4 hypothetical protein YP_002549563.1 1788629 D 311402 CDS YP_002549564.1 222148607 7387889 complement(1790360..1791175) 1 NC_011989.1 hypothetical protein 1791175 7387889 Avi_2174 Agrobacterium vitis S4 hypothetical protein YP_002549564.1 1790360 R 311402 CDS YP_002549565.1 222148608 7387890 complement(1791277..1792143) 1 NC_011989.1 ABC transporter permease 1792143 7387890 Avi_2178 Agrobacterium vitis S4 ABC transporter permease YP_002549565.1 1791277 R 311402 CDS YP_002549566.1 222148609 7387891 complement(1792140..1792994) 1 NC_011989.1 ABC transporter permease 1792994 7387891 Avi_2179 Agrobacterium vitis S4 ABC transporter permease YP_002549566.1 1792140 R 311402 CDS YP_002549567.1 222148610 7387892 complement(1792994..1794034) 1 NC_011989.1 ABC transporter ATPase 1794034 7387892 Avi_2180 Agrobacterium vitis S4 ABC transporter ATPase YP_002549567.1 1792994 R 311402 CDS YP_002549568.1 222148611 7387893 complement(1794068..1795297) 1 NC_011989.1 ABC transporter substrate-binding protein 1795297 7387893 Avi_2181 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002549568.1 1794068 R 311402 CDS YP_002549569.1 222148612 7387894 1795436..1796584 1 NC_011989.1 transcriptional regulator ROK family 1796584 7387894 Avi_2182 Agrobacterium vitis S4 transcriptional regulator ROK family YP_002549569.1 1795436 D 311402 CDS YP_002549570.1 222148613 7387895 complement(1796597..1797811) 1 NC_011989.1 hypothetical protein 1797811 7387895 Avi_2183 Agrobacterium vitis S4 hypothetical protein YP_002549570.1 1796597 R 311402 CDS YP_002549571.1 222148614 7387896 complement(1797896..1798822) 1 NC_011989.1 ABC transporter substrate binding protein (zinc) 1798822 znuA 7387896 znuA Agrobacterium vitis S4 ABC transporter substrate binding protein (zinc) YP_002549571.1 1797896 R 311402 CDS YP_002549572.1 222148615 7387897 1799008..1799958 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (zinc) 1799958 znuC 7387897 znuC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (zinc) YP_002549572.1 1799008 D 311402 CDS YP_002549573.1 222148616 7387898 1799948..1800760 1 NC_011989.1 zinc ABC transporter permease 1800760 znuB 7387898 znuB Agrobacterium vitis S4 zinc ABC transporter permease YP_002549573.1 1799948 D 311402 CDS YP_002549574.1 222148617 7387899 1800765..1801166 1 NC_011989.1 transcriptional regulator Fur family 1801166 zur 7387899 zur Agrobacterium vitis S4 transcriptional regulator Fur family YP_002549574.1 1800765 D 311402 CDS YP_002549575.1 222148618 7387900 complement(1801260..1801805) 1 NC_011989.1 hypothetical protein 1801805 7387900 Avi_2190 Agrobacterium vitis S4 hypothetical protein YP_002549575.1 1801260 R 311402 CDS YP_002549576.1 222148619 7387901 complement(1801924..1802292) 1 NC_011989.1 hypothetical protein 1802292 7387901 Avi_2191 Agrobacterium vitis S4 hypothetical protein YP_002549576.1 1801924 R 311402 CDS YP_002549577.1 222148620 7387902 complement(1802475..1802762) 1 NC_011989.1 hypothetical protein 1802762 7387902 Avi_2192 Agrobacterium vitis S4 hypothetical protein YP_002549577.1 1802475 R 311402 CDS YP_002549578.1 222148621 7387903 complement(1802853..1804307) 1 NC_011989.1 D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein 1804307 dacF 7387903 dacF Agrobacterium vitis S4 D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein YP_002549578.1 1802853 R 311402 CDS YP_002549579.1 222148622 7387904 complement(1804557..1805312) 1 NC_011989.1 hypothetical protein 1805312 7387904 Avi_2196 Agrobacterium vitis S4 hypothetical protein YP_002549579.1 1804557 R 311402 CDS YP_002549580.1 222148623 7387905 complement(1805600..1806121) 1 NC_011989.1 hypothetical protein 1806121 7387905 Avi_2198 Agrobacterium vitis S4 hypothetical protein YP_002549580.1 1805600 R 311402 CDS YP_002549581.1 222148624 7387906 complement(1806834..1807445) 1 NC_011989.1 hypothetical protein 1807445 7387906 Avi_2200 Agrobacterium vitis S4 hypothetical protein YP_002549581.1 1806834 R 311402 CDS YP_002549582.1 222148625 7387907 complement(1807666..1809591) 1 NC_011989.1 serine protease 1809591 7387907 Avi_2201 Agrobacterium vitis S4 serine protease YP_002549582.1 1807666 R 311402 CDS YP_002549583.1 222148626 7387908 1809879..1810670 1 NC_011989.1 hypothetical protein 1810670 7387908 Avi_2202 Agrobacterium vitis S4 hypothetical protein YP_002549583.1 1809879 D 311402 CDS YP_002549584.1 222148627 7387909 1810809..1811243 1 NC_011989.1 hypothetical protein 1811243 7387909 Avi_2203 Agrobacterium vitis S4 hypothetical protein YP_002549584.1 1810809 D 311402 CDS YP_002549585.1 222148628 7387910 complement(1811417..1812367) 1 NC_011989.1 hypothetical protein 1812367 7387910 Avi_2204 Agrobacterium vitis S4 hypothetical protein YP_002549585.1 1811417 R 311402 CDS YP_002549586.1 222148629 7387911 complement(1812670..1813128) 1 NC_011989.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1813128 hisI 7387911 hisI Agrobacterium vitis S4 phosphoribosyl-AMP cyclohydrolase YP_002549586.1 1812670 R 311402 CDS YP_002549587.1 222148630 7387912 complement(1813227..1813832) 1 NC_011989.1 GTP cyclohydrolase I 1813832 folE 7387912 folE Agrobacterium vitis S4 GTP cyclohydrolase I YP_002549587.1 1813227 R 311402 CDS YP_002549588.1 222148631 7387913 1814105..1814548 1 NC_011989.1 NIFU-like protein 1814548 nifU 7387913 nifU Agrobacterium vitis S4 NIFU-like protein YP_002549588.1 1814105 D 311402 CDS YP_002549589.1 222148632 7387914 1814562..1814948 1 NC_011989.1 hypothetical protein 1814948 7387914 Avi_2209 Agrobacterium vitis S4 hypothetical protein YP_002549589.1 1814562 D 311402 CDS YP_002549590.1 222148633 7387915 1815138..1817138 1 NC_011989.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1817138 thrS 7387915 thrS Agrobacterium vitis S4 threonyl-tRNA synthetase YP_002549590.1 1815138 D 311402 CDS YP_002549591.1 222148634 7387916 complement(1817189..1817725) 1 NC_011989.1 hypothetical protein 1817725 7387916 Avi_2213 Agrobacterium vitis S4 hypothetical protein YP_002549591.1 1817189 R 311402 CDS YP_002549592.1 222148635 7387917 1817955..1818908 1 NC_011989.1 hypothetical protein 1818908 7387917 Avi_2214 Agrobacterium vitis S4 hypothetical protein YP_002549592.1 1817955 D 311402 CDS YP_002549593.1 222148636 7387918 1819078..1820049 1 NC_011989.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1820049 nadA 7387918 nadA Agrobacterium vitis S4 quinolinate synthetase YP_002549593.1 1819078 D 311402 CDS YP_002549594.1 222148637 7387919 1820046..1821596 1 NC_011989.1 L-aspartate oxidase 1821596 nadB 7387919 nadB Agrobacterium vitis S4 L-aspartate oxidase YP_002549594.1 1820046 D 311402 CDS YP_002549595.1 222148638 7387920 1821598..1822455 1 NC_011989.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 1822455 nadC 7387920 nadC Agrobacterium vitis S4 nicotinate-nucleotide pyrophosphorylase YP_002549595.1 1821598 D 311402 CDS YP_002549596.1 222148639 7387921 complement(1822462..1823448) 1 NC_011989.1 hypothetical protein 1823448 7387921 Avi_2219 Agrobacterium vitis S4 hypothetical protein YP_002549596.1 1822462 R 311402 CDS YP_002549597.1 222148640 7387922 1823671..1824255 1 NC_011989.1 nitroreductase family protein 1824255 7387922 Avi_2220 Agrobacterium vitis S4 nitroreductase family protein YP_002549597.1 1823671 D 311402 CDS YP_002549598.1 222148641 7387923 1824255..1824860 1 NC_011989.1 hypothetical protein 1824860 7387923 Avi_2221 Agrobacterium vitis S4 hypothetical protein YP_002549598.1 1824255 D 311402 CDS YP_002549599.1 222148642 7387925 complement(1824849..1825574) 1 NC_011989.1 hypothetical protein 1825574 7387925 Avi_2222 Agrobacterium vitis S4 hypothetical protein YP_002549599.1 1824849 R 311402 CDS YP_002549600.1 222148643 7386329 1825637..1826785 1 NC_011989.1 hypothetical protein 1826785 7386329 Avi_2223 Agrobacterium vitis S4 hypothetical protein YP_002549600.1 1825637 D 311402 CDS YP_002549601.1 222148644 7386330 complement(1826823..1827221) 1 NC_011989.1 hypothetical protein 1827221 7386330 Avi_2224 Agrobacterium vitis S4 hypothetical protein YP_002549601.1 1826823 R 311402 CDS YP_002549602.1 222148645 7386331 1827359..1827844 1 NC_011989.1 acetyltransferase 1827844 7386331 Avi_2225 Agrobacterium vitis S4 acetyltransferase YP_002549602.1 1827359 D 311402 CDS YP_002549603.1 222148646 7386332 complement(1827876..1829984) 1 NC_011989.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1829984 gyrB 7386332 gyrB Agrobacterium vitis S4 DNA topoisomerase IV subunit B YP_002549603.1 1827876 R 311402 CDS YP_002549604.1 222148647 7386333 1830302..1831195 1 NC_011989.1 hypothetical protein 1831195 7386333 Avi_2227 Agrobacterium vitis S4 hypothetical protein YP_002549604.1 1830302 D 311402 CDS YP_002549605.1 222148648 7386334 complement(1831236..1832432) 1 NC_011989.1 GGDEF domain protein 1832432 7386334 Avi_2229 Agrobacterium vitis S4 GGDEF domain protein YP_002549605.1 1831236 R 311402 CDS YP_002549606.1 222148649 7386335 1832793..1833563 1 NC_011989.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1833563 tpiA 7386335 tpiA Agrobacterium vitis S4 triosephosphate isomerase YP_002549606.1 1832793 D 311402 CDS YP_002549607.1 222148650 7386336 1833661..1834047 1 NC_011989.1 protein-export membrane protein SECG 1834047 secG 7386336 secG Agrobacterium vitis S4 protein-export membrane protein SECG YP_002549607.1 1833661 D 311402 CDS YP_002549608.1 222148651 7386337 1834134..1835801 1 NC_011989.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1835801 pyrG 7386337 pyrG Agrobacterium vitis S4 CTP synthetase YP_002549608.1 1834134 D 311402 CDS YP_002549609.1 222148652 7386338 1835984..1837006 1 NC_011989.1 amide hydrolase 1837006 7386338 Avi_2236 Agrobacterium vitis S4 amide hydrolase YP_002549609.1 1835984 D 311402 CDS YP_002549610.1 222148653 7386339 1837030..1837941 1 NC_011989.1 agmatinase 1837941 7386339 Avi_2237 Agrobacterium vitis S4 agmatinase YP_002549610.1 1837030 D 311402 CDS YP_002549611.1 222148654 7386340 complement(1838036..1844794) 1 NC_011989.1 hypothetical protein 1844794 7386340 Avi_2239 Agrobacterium vitis S4 hypothetical protein YP_002549611.1 1838036 R 311402 CDS YP_002549612.1 222148655 7386341 1845289..1845657 1 NC_011989.1 hypothetical protein 1845657 7386341 Avi_2241 Agrobacterium vitis S4 hypothetical protein YP_002549612.1 1845289 D 311402 CDS YP_002549613.1 222148656 7386342 1845873..1846193 1 NC_011989.1 ferrodoxin 1846193 fdx 7386342 fdx Agrobacterium vitis S4 ferrodoxin YP_002549613.1 1845873 D 311402 CDS YP_002549614.1 222148657 7386343 complement(1846266..1846940) 1 NC_011989.1 hypothetical protein 1846940 7386343 Avi_2245 Agrobacterium vitis S4 hypothetical protein YP_002549614.1 1846266 R 311402 CDS YP_002549615.1 222148658 7386344 1847201..1848094 1 NC_011989.1 dihydropteroate synthase 1848094 folP 7386344 folP Agrobacterium vitis S4 dihydropteroate synthase YP_002549615.1 1847201 D 311402 CDS YP_002549616.1 222148659 7386345 1848087..1848455 1 NC_011989.1 dihydroneopterin aldolase 1848455 folB 7386345 folB Agrobacterium vitis S4 dihydroneopterin aldolase YP_002549616.1 1848087 D 311402 CDS YP_002549617.1 222148660 7386346 1848466..1848966 1 NC_011989.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1848966 folK 7386346 folK Agrobacterium vitis S4 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_002549617.1 1848466 D 311402 CDS YP_002549618.1 222148661 7386347 complement(1849878..1852742) 1 NC_011989.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1852742 gcvP 7386347 gcvP Agrobacterium vitis S4 glycine dehydrogenase YP_002549618.1 1849878 R 311402 CDS YP_002549619.1 222148662 7386348 complement(1852739..1853101) 1 NC_011989.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1853101 gcvH 7386348 gcvH Agrobacterium vitis S4 glycine cleavage system protein H YP_002549619.1 1852739 R 311402 CDS YP_002549620.1 222148663 7386349 complement(1853118..1854257) 1 NC_011989.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1854257 gcvT 7386349 gcvT Agrobacterium vitis S4 glycine cleavage system aminomethyltransferase T YP_002549620.1 1853118 R 311402 CDS YP_002549621.1 222148664 7386350 1854760..1855272 1 NC_011989.1 hypothetical protein 1855272 7386350 Avi_2255 Agrobacterium vitis S4 hypothetical protein YP_002549621.1 1854760 D 311402 CDS YP_002549622.1 222148665 7386351 complement(1855792..1856097) 1 NC_011989.1 hypothetical protein 1856097 7386351 Avi_2257 Agrobacterium vitis S4 hypothetical protein YP_002549622.1 1855792 R 311402 CDS YP_002549623.1 222148666 7386352 1856306..1856683 1 NC_011989.1 camphor resistance protein 1856683 crcB 7386352 crcB Agrobacterium vitis S4 camphor resistance protein YP_002549623.1 1856306 D 311402 CDS YP_002549624.1 222148667 7386353 1856814..1857806 1 NC_011989.1 ribosomal large subunit pseudouridine synthase C 1857806 rluC 7386353 rluC Agrobacterium vitis S4 ribosomal large subunit pseudouridine synthase C YP_002549624.1 1856814 D 311402 CDS YP_002549625.1 222148668 7386354 1857803..1858474 1 NC_011989.1 hydrolase 1858474 7386354 Avi_2262 Agrobacterium vitis S4 hydrolase YP_002549625.1 1857803 D 311402 CDS YP_002549626.1 222148669 7386355 1858467..1859252 1 NC_011989.1 hypothetical protein 1859252 7386355 Avi_2263 Agrobacterium vitis S4 hypothetical protein YP_002549626.1 1858467 D 311402 CDS YP_002549627.1 222148670 7386356 complement(1859272..1859577) 1 NC_011989.1 hypothetical protein 1859577 7386356 Avi_2265 Agrobacterium vitis S4 hypothetical protein YP_002549627.1 1859272 R 311402 CDS YP_002549628.1 222148671 7386357 complement(1859931..1861250) 1 NC_011989.1 MFS permease 1861250 kgtP 7386357 kgtP Agrobacterium vitis S4 MFS permease YP_002549628.1 1859931 R 311402 CDS YP_002549629.1 222148672 7386358 1861713..1862339 1 NC_011989.1 hypothetical protein 1862339 7386358 Avi_2268 Agrobacterium vitis S4 hypothetical protein YP_002549629.1 1861713 D 311402 CDS YP_002549630.1 222148673 7386359 complement(1862403..1862729) 1 NC_011989.1 flagellar hook protein 1862729 flgE 7386359 flgE Agrobacterium vitis S4 flagellar hook protein YP_002549630.1 1862403 R 311402 CDS YP_002549631.1 222148674 7386360 complement(1862850..1863686) 1 NC_011989.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1863686 radC 7386360 radC Agrobacterium vitis S4 DNA repair protein RadC YP_002549631.1 1862850 R 311402 CDS YP_002549632.1 222148675 7386361 complement(1863690..1864526) 1 NC_011989.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1864526 map 7386361 map Agrobacterium vitis S4 methionine aminopeptidase YP_002549632.1 1863690 R 311402 CDS YP_002549633.1 222148676 7386362 complement(1864652..1865536) 1 NC_011989.1 LysR family transcriptional regulator 1865536 7386362 Avi_2273 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002549633.1 1864652 R 311402 CDS YP_002549634.1 222148677 7386363 1865754..1866668 1 NC_011989.1 hypothetical protein 1866668 7386363 Avi_2274 Agrobacterium vitis S4 hypothetical protein YP_002549634.1 1865754 D 311402 CDS YP_002549635.1 222148678 7386364 complement(1866685..1867392) 1 NC_011989.1 sugar fermentation stimulation protein 1867392 sfsA 7386364 sfsA Agrobacterium vitis S4 sugar fermentation stimulation protein YP_002549635.1 1866685 R 311402 CDS YP_002549636.1 222148679 7386365 complement(1867417..1869387) 1 NC_011989.1 poly-beta-hydroxybutyrate synthase 1869387 phbC 7386365 phbC Agrobacterium vitis S4 poly-beta-hydroxybutyrate synthase YP_002549636.1 1867417 R 311402 CDS YP_002549637.1 222148680 7386366 1869608..1870030 1 NC_011989.1 hypothetical protein 1870030 7386366 Avi_2277 Agrobacterium vitis S4 hypothetical protein YP_002549637.1 1869608 D 311402 CDS YP_002549638.1 222148681 7386367 1870311..1871528 1 NC_011989.1 aminotransferase 1871528 7386367 Avi_2278 Agrobacterium vitis S4 aminotransferase YP_002549638.1 1870311 D 311402 CDS YP_002549639.1 222148682 7386368 1871598..1872920 1 NC_011989.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1872920 hom 7386368 hom Agrobacterium vitis S4 homoserine dehydrogenase YP_002549639.1 1871598 D 311402 CDS YP_002549640.1 222148683 7386369 1872961..1874763 1 NC_011989.1 single-stranded-DNA-specific exonuclease 1874763 recJ 7386369 recJ Agrobacterium vitis S4 single-stranded-DNA-specific exonuclease YP_002549640.1 1872961 D 311402 CDS YP_002549641.1 222148684 7387176 complement(1875573..1876499) 1 NC_011989.1 OmpA family protein 1876499 7387176 Avi_2282 Agrobacterium vitis S4 OmpA family protein YP_002549641.1 1875573 R 311402 CDS YP_002549642.1 222148685 7386371 complement(1876661..1877101) 1 NC_011989.1 lactoylglutathione lyase 1877101 gloA 7386371 gloA Agrobacterium vitis S4 lactoylglutathione lyase YP_002549642.1 1876661 R 311402 CDS YP_002549643.1 222148686 7386372 1877410..1877988 1 NC_011989.1 cold shock protein 1877988 cspA 7386372 cspA Agrobacterium vitis S4 cold shock protein YP_002549643.1 1877410 D 311402 CDS YP_002549644.1 222148687 7386373 1878014..1878481 1 NC_011989.1 hypothetical protein 1878481 7386373 Avi_2287 Agrobacterium vitis S4 hypothetical protein YP_002549644.1 1878014 D 311402 CDS YP_002549645.1 222148688 7388256 1878740..1879045 1 NC_011989.1 hypothetical protein 1879045 7388256 Avi_2288 Agrobacterium vitis S4 hypothetical protein YP_002549645.1 1878740 D 311402 CDS YP_002549646.1 222148689 7387160 complement(1879238..1880278) 1 NC_011989.1 phage-related integrase 1880278 intD 7387160 intD Agrobacterium vitis S4 phage-related integrase YP_002549646.1 1879238 R 311402 CDS YP_002549647.1 222148690 7386376 complement(1880498..1880944) 1 NC_011989.1 hypothetical protein 1880944 7386376 Avi_2291 Agrobacterium vitis S4 hypothetical protein YP_002549647.1 1880498 R 311402 CDS YP_002549648.1 222148691 7386377 complement(1882221..1885514) 1 NC_011989.1 DNA polymerase III alpha chain 1885514 dnaE 7386377 dnaE Agrobacterium vitis S4 DNA polymerase III alpha chain YP_002549648.1 1882221 R 311402 CDS YP_002549649.1 222148692 7386378 complement(1885511..1886929) 1 NC_011989.1 hypothetical protein 1886929 7386378 Avi_2295 Agrobacterium vitis S4 hypothetical protein YP_002549649.1 1885511 R 311402 CDS YP_002549650.1 222148693 7386379 complement(1886943..1887695) 1 NC_011989.1 hypothetical protein 1887695 7386379 Avi_2296 Agrobacterium vitis S4 hypothetical protein YP_002549650.1 1886943 R 311402 CDS YP_002549651.1 222148694 7386380 complement(1888270..1889130) 1 NC_011989.1 gas vesicle protein 1889130 7386380 Avi_2298 Agrobacterium vitis S4 gas vesicle protein YP_002549651.1 1888270 R 311402 CDS YP_002549652.1 222148695 7386381 complement(1889611..1890024) 1 NC_011989.1 hypothetical protein 1890024 7386381 Avi_2300 Agrobacterium vitis S4 hypothetical protein YP_002549652.1 1889611 R 311402 CDS YP_002549653.1 222148696 7386382 complement(1890441..1891022) 1 NC_011989.1 hypothetical protein 1891022 7386382 Avi_2301 Agrobacterium vitis S4 hypothetical protein YP_002549653.1 1890441 R 311402 CDS YP_002549654.1 222148697 7386383 1891841..1892251 1 NC_011989.1 Prophage antirepressor 1892251 7386383 Avi_2303 Agrobacterium vitis S4 Prophage antirepressor YP_002549654.1 1891841 D 311402 CDS YP_002549655.1 222148698 7386384 1893402..1894172 1 NC_011989.1 hypothetical protein 1894172 7386384 Avi_2306 Agrobacterium vitis S4 hypothetical protein YP_002549655.1 1893402 D 311402 CDS YP_002549656.1 222148699 7386385 1894755..1895384 1 NC_011989.1 hypothetical protein 1895384 7386385 Avi_2308 Agrobacterium vitis S4 hypothetical protein YP_002549656.1 1894755 D 311402 CDS YP_002549657.1 222148700 7386386 1895629..1896231 1 NC_011989.1 hypothetical protein 1896231 7386386 Avi_2309 Agrobacterium vitis S4 hypothetical protein YP_002549657.1 1895629 D 311402 CDS YP_002549658.1 222148701 7386387 1896228..1898243 1 NC_011989.1 Phage terminase large subunit (gp15) 1898243 7386387 Avi_2311 Agrobacterium vitis S4 Phage terminase large subunit (gp15) YP_002549658.1 1896228 D 311402 CDS YP_002549659.1 222148702 7386388 1898240..1899877 1 NC_011989.1 Bacteriophage capsid protein 1899877 7386388 Avi_2312 Agrobacterium vitis S4 Bacteriophage capsid protein YP_002549659.1 1898240 D 311402 CDS YP_002549660.1 222148703 7386389 1900153..1901073 1 NC_011989.1 Periplasmic serine proteases (ClpP class) 1901073 7386389 Avi_2314 Agrobacterium vitis S4 Periplasmic serine proteases (ClpP class) YP_002549660.1 1900153 D 311402 CDS YP_002549661.1 222148704 7386390 1901078..1901671 1 NC_011989.1 lytic murein transglycosylase 1901671 7386390 Avi_2316 Agrobacterium vitis S4 lytic murein transglycosylase YP_002549661.1 1901078 D 311402 CDS YP_002549662.1 222148705 7386391 1901675..1902037 1 NC_011989.1 hypothetical protein 1902037 7386391 Avi_2317 Agrobacterium vitis S4 hypothetical protein YP_002549662.1 1901675 D 311402 CDS YP_002549663.1 222148706 7386392 1902049..1903065 1 NC_011989.1 hypothetical protein 1903065 7386392 Avi_2319 Agrobacterium vitis S4 hypothetical protein YP_002549663.1 1902049 D 311402 CDS YP_002549664.1 222148707 7386393 1903143..1903622 1 NC_011989.1 membrane spanning protein 1903622 7386393 Avi_2321 Agrobacterium vitis S4 membrane spanning protein YP_002549664.1 1903143 D 311402 CDS YP_002549665.1 222148708 7386394 1903626..1903997 1 NC_011989.1 hypothetical protein 1903997 7386394 Avi_2322 Agrobacterium vitis S4 hypothetical protein YP_002549665.1 1903626 D 311402 CDS YP_002549666.1 222148709 7386395 1904782..1905324 1 NC_011989.1 hypothetical protein 1905324 7386395 Avi_2324 Agrobacterium vitis S4 hypothetical protein YP_002549666.1 1904782 D 311402 CDS YP_002549667.1 222148710 7386396 1905321..1905716 1 NC_011989.1 baseplate protein 1905716 7386396 Avi_2326 Agrobacterium vitis S4 baseplate protein YP_002549667.1 1905321 D 311402 CDS YP_002549668.1 222148711 7386397 1905720..1906577 1 NC_011989.1 Phage-related baseplate assembly protein 1906577 7386397 Avi_2327 Agrobacterium vitis S4 Phage-related baseplate assembly protein YP_002549668.1 1905720 D 311402 CDS YP_002549669.1 222148712 7386398 1906574..1907707 1 NC_011989.1 Phage protein gp27 1907707 7386398 Avi_2328 Agrobacterium vitis S4 Phage protein gp27 YP_002549669.1 1906574 D 311402 CDS YP_002549670.1 222148713 7386399 1907720..1910929 1 NC_011989.1 Virulence-associated protein 1910929 7386399 Avi_2330 Agrobacterium vitis S4 Virulence-associated protein YP_002549670.1 1907720 D 311402 CDS YP_002549671.1 222148714 7386400 1910939..1912096 1 NC_011989.1 bacteriophage tail fiber protein 1912096 7386400 Avi_2331 Agrobacterium vitis S4 bacteriophage tail fiber protein YP_002549671.1 1910939 D 311402 CDS YP_002549672.1 222148715 7386401 1912417..1913679 1 NC_011989.1 phage tail sheath protein 1913679 7386401 Avi_2334 Agrobacterium vitis S4 phage tail sheath protein YP_002549672.1 1912417 D 311402 CDS YP_002549673.1 222148716 7386402 1913706..1914239 1 NC_011989.1 phage major tail tube protein 1914239 7386402 Avi_2335 Agrobacterium vitis S4 phage major tail tube protein YP_002549673.1 1913706 D 311402 CDS YP_002549674.1 222148717 7386403 1914236..1914706 1 NC_011989.1 hypothetical protein 1914706 7386403 Avi_2336 Agrobacterium vitis S4 hypothetical protein YP_002549674.1 1914236 D 311402 CDS YP_002549675.1 222148718 7386404 1914789..1916588 1 NC_011989.1 Phage tail tape measure protein 1916588 7386404 Avi_2337 Agrobacterium vitis S4 Phage tail tape measure protein YP_002549675.1 1914789 D 311402 CDS YP_002549676.1 222148719 7386405 1917311..1917619 1 NC_011989.1 hypothetical protein 1917619 7386405 Avi_2340 Agrobacterium vitis S4 hypothetical protein YP_002549676.1 1917311 D 311402 CDS YP_002549677.1 222148720 7386406 1917885..1918676 1 NC_011989.1 Prophage antirepressor protein 1918676 7386406 Avi_2342 Agrobacterium vitis S4 Prophage antirepressor protein YP_002549677.1 1917885 D 311402 CDS YP_002549678.1 222148721 7386407 1918767..1919702 1 NC_011989.1 hypothetical protein 1919702 7386407 Avi_2343 Agrobacterium vitis S4 hypothetical protein YP_002549678.1 1918767 D 311402 CDS YP_002549679.1 222148722 7386408 1919785..1920204 1 NC_011989.1 phage tail assembly protein 1920204 7386408 Avi_2344 Agrobacterium vitis S4 phage tail assembly protein YP_002549679.1 1919785 D 311402 CDS YP_002549680.1 222148723 7386409 1920434..1921447 1 NC_011989.1 hypothetical protein 1921447 7386409 Avi_2347 Agrobacterium vitis S4 hypothetical protein YP_002549680.1 1920434 D 311402 CDS YP_002549681.1 222148724 7386410 1921744..1922322 1 NC_011989.1 phage related lysozyme protein 1922322 7386410 Avi_2350 Agrobacterium vitis S4 phage related lysozyme protein YP_002549681.1 1921744 D 311402 CDS YP_002549682.1 222148725 7386411 1922665..1923069 1 NC_011989.1 hypothetical protein 1923069 7386411 Avi_2351 Agrobacterium vitis S4 hypothetical protein YP_002549682.1 1922665 D 311402 CDS YP_002549683.1 222148726 7386001 1923308..1923904 1 NC_011989.1 hypothetical protein 1923904 7386001 Avi_2353 Agrobacterium vitis S4 hypothetical protein YP_002549683.1 1923308 D 311402 CDS YP_002549684.1 222148727 7386002 1923960..1924298 1 NC_011989.1 hypothetical protein 1924298 7386002 Avi_2354 Agrobacterium vitis S4 hypothetical protein YP_002549684.1 1923960 D 311402 CDS YP_002549685.1 222148728 7386003 1924481..1926400 1 NC_011989.1 variable tail fiber protein 1926400 7386003 Avi_2356 Agrobacterium vitis S4 variable tail fiber protein YP_002549685.1 1924481 D 311402 CDS YP_002549686.1 222148729 7386004 complement(1927306..1927704) 1 NC_011989.1 hypothetical protein 1927704 7386004 Avi_2357 Agrobacterium vitis S4 hypothetical protein YP_002549686.1 1927306 R 311402 CDS YP_002549687.1 222148730 7386005 complement(1928626..1929855) 1 NC_011989.1 hypothetical protein 1929855 7386005 Avi_2360 Agrobacterium vitis S4 hypothetical protein YP_002549687.1 1928626 R 311402 CDS YP_002549688.1 222148731 7386006 complement(1930618..1930857) 1 NC_011989.1 hypothetical protein 1930857 7386006 Avi_2361 Agrobacterium vitis S4 hypothetical protein YP_002549688.1 1930618 R 311402 CDS YP_002549689.1 222148732 7386007 complement(1931091..1931309) 1 NC_011989.1 hypothetical protein 1931309 7386007 Avi_2362 Agrobacterium vitis S4 hypothetical protein YP_002549689.1 1931091 R 311402 CDS YP_002549690.1 222148733 7386008 complement(1931335..1933707) 1 NC_011989.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1933707 recG 7386008 recG Agrobacterium vitis S4 ATP-dependent DNA helicase RecG YP_002549690.1 1931335 R 311402 CDS YP_002549691.1 222148734 7386009 1933908..1934255 1 NC_011989.1 hypothetical protein 1934255 7386009 Avi_2364 Agrobacterium vitis S4 hypothetical protein YP_002549691.1 1933908 D 311402 CDS YP_002549692.1 222148735 7386010 1934252..1937779 1 NC_011989.1 transcription-repair coupling factor 1937779 mfd 7386010 mfd Agrobacterium vitis S4 transcription-repair coupling factor YP_002549692.1 1934252 D 311402 CDS YP_002549693.1 222148736 7386011 1937845..1938822 1 NC_011989.1 hypothetical protein 1938822 7386011 Avi_2367 Agrobacterium vitis S4 hypothetical protein YP_002549693.1 1937845 D 311402 CDS YP_002549694.1 222148737 7386012 complement(1938867..1939802) 1 NC_011989.1 hypothetical protein 1939802 7386012 Avi_2368 Agrobacterium vitis S4 hypothetical protein YP_002549694.1 1938867 R 311402 CDS YP_002549695.1 222148738 7386013 complement(1939895..1940566) 1 NC_011989.1 polyketide biosynthesis associated protein 1940566 7386013 Avi_2369 Agrobacterium vitis S4 polyketide biosynthesis associated protein YP_002549695.1 1939895 R 311402 CDS YP_002549696.1 222148739 7386014 complement(1940642..1942489) 1 NC_011989.1 ABC transporter substrate binding protein (peptide) 1942489 7386014 Avi_2370 Agrobacterium vitis S4 ABC transporter substrate binding protein (peptide) YP_002549696.1 1940642 R 311402 CDS YP_002549697.1 222148740 7386015 1942819..1943454 1 NC_011989.1 hypothetical protein 1943454 7386015 Avi_2372 Agrobacterium vitis S4 hypothetical protein YP_002549697.1 1942819 D 311402 CDS YP_002549698.1 222148741 7386016 complement(1943536..1943913) 1 NC_011989.1 hypothetical protein 1943913 7386016 Avi_2374 Agrobacterium vitis S4 hypothetical protein YP_002549698.1 1943536 R 311402 CDS YP_002549699.1 222148742 7386017 complement(1944055..1945464) 1 NC_011989.1 glutamine synthetase 1945464 glnA 7386017 glnA Agrobacterium vitis S4 glutamine synthetase YP_002549699.1 1944055 R 311402 CDS YP_002549700.1 222148743 7386018 complement(1945526..1945864) 1 NC_011989.1 nitrogen regulatory protein PII 1945864 glnB 7386018 glnB Agrobacterium vitis S4 nitrogen regulatory protein PII YP_002549700.1 1945526 R 311402 CDS YP_002549701.1 222148744 7386019 1946201..1947682 1 NC_011989.1 hypothetical protein 1947682 7386019 Avi_2378 Agrobacterium vitis S4 hypothetical protein YP_002549701.1 1946201 D 311402 CDS YP_002549702.1 222148745 7386020 complement(1947679..1948218) 1 NC_011989.1 acetyltransferase 1948218 7386020 Avi_2379 Agrobacterium vitis S4 acetyltransferase YP_002549702.1 1947679 R 311402 CDS YP_002549703.1 222148746 7386021 complement(1948226..1949029) 1 NC_011989.1 hypothetical protein 1949029 7386021 Avi_2380 Agrobacterium vitis S4 hypothetical protein YP_002549703.1 1948226 R 311402 CDS YP_002549704.1 222148747 7386022 complement(1949051..1951972) 1 NC_011989.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1951972 uvrA 7386022 uvrA Agrobacterium vitis S4 excinuclease ABC subunit A YP_002549704.1 1949051 R 311402 CDS YP_002549705.1 222148748 7386023 1952252..1952782 1 NC_011989.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1952782 ssb 7386023 ssb Agrobacterium vitis S4 single-stranded DNA-binding protein YP_002549705.1 1952252 D 311402 CDS YP_002549706.1 222148749 7386024 complement(1953155..1953784) 1 NC_011989.1 hypothetical protein 1953784 7386024 Avi_2385 Agrobacterium vitis S4 hypothetical protein YP_002549706.1 1953155 R 311402 CDS YP_002549707.1 222148750 7386025 1954063..1956855 1 NC_011989.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1956855 gyrA 7386025 gyrA Agrobacterium vitis S4 DNA gyrase subunit A YP_002549707.1 1954063 D 311402 CDS YP_002549708.1 222148751 7386026 complement(1956980..1959439) 1 NC_011989.1 heavy-metal transporting P-type ATPase 1959439 7386026 Avi_2388 Agrobacterium vitis S4 heavy-metal transporting P-type ATPase YP_002549708.1 1956980 R 311402 CDS YP_002549709.1 222148752 7386027 1959625..1961211 1 NC_011989.1 cytochrome c oxidase accessory protein CcoG 1961211 ccoG 7386027 ccoG Agrobacterium vitis S4 cytochrome c oxidase accessory protein CcoG YP_002549709.1 1959625 D 311402 CDS YP_002549710.1 222148753 7386028 1961208..1961702 1 NC_011989.1 nitrogen fixation protein FixH 1961702 fixH 7386028 fixH Agrobacterium vitis S4 nitrogen fixation protein FixH YP_002549710.1 1961208 D 311402 CDS YP_002549711.1 222148754 7386029 1961699..1964062 1 NC_011989.1 nitrogen fixation protein FixI 1964062 fixI 7386029 fixI Agrobacterium vitis S4 nitrogen fixation protein FixI YP_002549711.1 1961699 D 311402 CDS YP_002549712.1 222148755 7386030 1964059..1964208 1 NC_011989.1 cytochrome oxidase maturation protein cbb3-type 1964208 ccoS 7386030 ccoS Agrobacterium vitis S4 cytochrome oxidase maturation protein cbb3-type YP_002549712.1 1964059 D 311402 CDS YP_002549713.1 222148756 7386031 1964340..1965776 1 NC_011989.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1965776 gnd 7386031 gnd Agrobacterium vitis S4 6-phosphogluconate dehydrogenase YP_002549713.1 1964340 D 311402 CDS YP_002549714.1 222148757 7386032 1965851..1966702 1 NC_011989.1 metallo-beta-lactamase 1966702 7386032 Avi_2397 Agrobacterium vitis S4 metallo-beta-lactamase YP_002549714.1 1965851 D 311402 CDS YP_002549715.1 222148758 7386033 complement(1966738..1967787) 1 NC_011989.1 transcriptional regulator LacI family 1967787 7386033 Avi_2398 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002549715.1 1966738 R 311402 CDS YP_002549716.1 222148759 7386034 1968207..1969442 1 NC_011989.1 ABC transporter substrate binding protein (sugar) 1969442 7386034 Avi_2399 Agrobacterium vitis S4 ABC transporter substrate binding protein (sugar) YP_002549716.1 1968207 D 311402 CDS YP_002549717.1 222148760 7386035 1969699..1970601 1 NC_011989.1 sugar ABC transporter permease 1970601 7386035 Avi_2400 Agrobacterium vitis S4 sugar ABC transporter permease YP_002549717.1 1969699 D 311402 CDS YP_002549718.1 222148761 7386036 1970579..1971532 1 NC_011989.1 ABC transporter permease 1971532 7386036 Avi_2402 Agrobacterium vitis S4 ABC transporter permease YP_002549718.1 1970579 D 311402 CDS YP_002549719.1 222148762 7386037 1971536..1972627 1 NC_011989.1 ABC transporter ATPase 1972627 7386037 Avi_2404 Agrobacterium vitis S4 ABC transporter ATPase YP_002549719.1 1971536 D 311402 CDS YP_002549720.1 222148763 7386038 1972806..1975253 1 NC_011989.1 beta-mannosidase precursor 1975253 manA 7386038 manA Agrobacterium vitis S4 beta-mannosidase precursor YP_002549720.1 1972806 D 311402 CDS YP_002549721.1 222148764 7386039 1975317..1976078 1 NC_011989.1 hypothetical protein 1976078 7386039 Avi_2406 Agrobacterium vitis S4 hypothetical protein YP_002549721.1 1975317 D 311402 CDS YP_002549722.1 222148765 7386040 1976106..1977239 1 NC_011989.1 hypothetical protein 1977239 7386040 Avi_2407 Agrobacterium vitis S4 hypothetical protein YP_002549722.1 1976106 D 311402 CDS YP_002549723.1 222148766 7386041 1977564..1978595 1 NC_011989.1 hypothetical protein 1978595 7386041 Avi_2408 Agrobacterium vitis S4 hypothetical protein YP_002549723.1 1977564 D 311402 CDS YP_002549724.1 222148767 7386042 1978854..1980479 1 NC_011989.1 hypothetical protein 1980479 7386042 Avi_2409 Agrobacterium vitis S4 hypothetical protein YP_002549724.1 1978854 D 311402 CDS YP_002549725.1 222148768 7386043 complement(1980464..1982338) 1 NC_011989.1 hypothetical protein 1982338 7386043 Avi_2410 Agrobacterium vitis S4 hypothetical protein YP_002549725.1 1980464 R 311402 CDS YP_002549726.1 222148769 7386044 complement(1982335..1984083) 1 NC_011989.1 hypothetical protein 1984083 7386044 Avi_2411 Agrobacterium vitis S4 hypothetical protein YP_002549726.1 1982335 R 311402 CDS YP_002549727.1 222148770 7386045 complement(1984301..1984954) 1 NC_011989.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 1984954 7386045 Avi_2412 Agrobacterium vitis S4 putative sulfite oxidase subunit YedZ YP_002549727.1 1984301 R 311402 CDS YP_002549728.1 222148771 7386046 complement(1984951..1985898) 1 NC_011989.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 1985898 7386046 Avi_2413 Agrobacterium vitis S4 putative sulfite oxidase subunit YedY YP_002549728.1 1984951 R 311402 CDS YP_002549729.1 222148772 7386047 1986157..1987992 1 NC_011989.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1987992 ilvD 7386047 ilvD Agrobacterium vitis S4 dihydroxy-acid dehydratase YP_002549729.1 1986157 D 311402 CDS YP_002549730.1 222148773 7386048 complement(1988710..1989714) 1 NC_011989.1 hypothetical protein 1989714 7386048 Avi_2415 Agrobacterium vitis S4 hypothetical protein YP_002549730.1 1988710 R 311402 CDS YP_002549731.1 222148774 7386049 complement(1989884..1990516) 1 NC_011989.1 RhtB family transporter 1990516 rhtB 7386049 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002549731.1 1989884 R 311402 CDS YP_002549732.1 222148775 7386050 complement(1990743..1992044) 1 NC_011989.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1992044 purB 7386050 purB Agrobacterium vitis S4 adenylosuccinate lyase YP_002549732.1 1990743 R 311402 CDS YP_002549733.1 222148776 7386051 complement(1992133..1992837) 1 NC_011989.1 hypothetical protein 1992837 7386051 Avi_2418 Agrobacterium vitis S4 hypothetical protein YP_002549733.1 1992133 R 311402 CDS YP_002549734.1 222148777 7386052 complement(1992861..1993538) 1 NC_011989.1 ribulose-phosphate 3-epimerase 1993538 rpe 7386052 rpe Agrobacterium vitis S4 ribulose-phosphate 3-epimerase YP_002549734.1 1992861 R 311402 CDS YP_002549735.1 222148778 7386053 1993732..1994493 1 NC_011989.1 gluconate dehydrogenase 1994493 7386053 Avi_2420 Agrobacterium vitis S4 gluconate dehydrogenase YP_002549735.1 1993732 D 311402 CDS YP_002549736.1 222148779 7386054 complement(1994504..1995589) 1 NC_011989.1 amino acid ABC transporter substrate-binding protein 1995589 7386054 Avi_2422 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002549736.1 1994504 R 311402 CDS YP_002549737.1 222148780 7386055 1995793..1996245 1 NC_011989.1 flavoprotein oxidoreductase 1996245 7386055 Avi_2423 Agrobacterium vitis S4 flavoprotein oxidoreductase YP_002549737.1 1995793 D 311402 CDS YP_002549738.1 222148781 7386056 1996267..1996611 1 NC_011989.1 hypothetical protein 1996611 7386056 Avi_2425 Agrobacterium vitis S4 hypothetical protein YP_002549738.1 1996267 D 311402 CDS YP_002549739.1 222148782 7386057 1997177..1998697 1 NC_011989.1 polyphenol oxidase b precursor (catechol oxidase) oxidoreductase 1998697 7386057 Avi_2427 Agrobacterium vitis S4 polyphenol oxidase b precursor (catechol oxidase) oxidoreductase YP_002549739.1 1997177 D 311402 CDS YP_002549740.1 222148783 7386058 1998703..1999548 1 NC_011989.1 hypothetical protein 1999548 7386058 Avi_2428 Agrobacterium vitis S4 hypothetical protein YP_002549740.1 1998703 D 311402 CDS YP_002549741.1 222148784 7386059 complement(1999540..1999944) 1 NC_011989.1 mutT like protein 1999944 7386059 Avi_2429 Agrobacterium vitis S4 mutT like protein YP_002549741.1 1999540 R 311402 CDS YP_002549742.1 222148785 7386060 complement(1999946..2001496) 1 NC_011989.1 ATP-dependent RNA helicase 2001496 rhlE 7386060 rhlE Agrobacterium vitis S4 ATP-dependent RNA helicase YP_002549742.1 1999946 R 311402 CDS YP_002549743.1 222148786 7386061 complement(2001662..2002285) 1 NC_011989.1 RhtB family transporter 2002285 rhtB 7386061 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002549743.1 2001662 R 311402 CDS YP_002549744.1 222148787 7386062 complement(2002418..2003095) 1 NC_011989.1 hypothetical protein 2003095 7386062 Avi_2433 Agrobacterium vitis S4 hypothetical protein YP_002549744.1 2002418 R 311402 CDS YP_002549745.1 222148788 7386063 2003392..2004555 1 NC_011989.1 cysteine desulfurase 2004555 nifS 7386063 nifS Agrobacterium vitis S4 cysteine desulfurase YP_002549745.1 2003392 D 311402 CDS YP_002549746.1 222148789 7386064 2004700..2006169 1 NC_011989.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2006169 sufB 7386064 sufB Agrobacterium vitis S4 cysteine desulfurase activator complex subunit SufB YP_002549746.1 2004700 D 311402 CDS YP_002549747.1 222148790 7386065 2006449..2007204 1 NC_011989.1 ABC transporter ATPase 2007204 sufC 7386065 sufC Agrobacterium vitis S4 ABC transporter ATPase YP_002549747.1 2006449 D 311402 CDS YP_002549748.1 222148791 7386066 2007228..2008502 1 NC_011989.1 transport system 2008502 sufD 7386066 sufD Agrobacterium vitis S4 transport system YP_002549748.1 2007228 D 311402 CDS YP_002549749.1 222148792 7386067 2008495..2008887 1 NC_011989.1 bleomycin resistance protein 2008887 7386067 Avi_2439 Agrobacterium vitis S4 bleomycin resistance protein YP_002549749.1 2008495 D 311402 CDS YP_002549750.1 222148793 7386068 2008877..2010127 1 NC_011989.1 aminotransferase 2010127 7386068 Avi_2440 Agrobacterium vitis S4 aminotransferase YP_002549750.1 2008877 D 311402 CDS YP_002549751.1 222148794 7386069 2010154..2010534 1 NC_011989.1 hypothetical protein 2010534 7386069 Avi_2441 Agrobacterium vitis S4 hypothetical protein YP_002549751.1 2010154 D 311402 CDS YP_002549752.1 222148795 7386070 2010675..2011061 1 NC_011989.1 FeS assembly scaffold SufA 2011061 sufA 7386070 sufA Agrobacterium vitis S4 FeS assembly scaffold SufA YP_002549752.1 2010675 D 311402 CDS YP_002549753.1 222148796 7386071 2011967..2012461 1 NC_011989.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2012461 coaD 7386071 coaD Agrobacterium vitis S4 phosphopantetheine adenylyltransferase YP_002549753.1 2011967 D 311402 CDS YP_002549754.1 222148797 7386072 2012489..2013067 1 NC_011989.1 peptidyl prolyl cis-trans isomerase 2013067 ppiB 7386072 ppiB Agrobacterium vitis S4 peptidyl prolyl cis-trans isomerase YP_002549754.1 2012489 D 311402 CDS YP_002549755.1 222148798 7386073 2013204..2013677 1 NC_011989.1 peptidyl prolyl cis-trans isomerase 2013677 ppiB 7386073 ppiB Agrobacterium vitis S4 peptidyl prolyl cis-trans isomerase YP_002549755.1 2013204 D 311402 CDS YP_002549756.1 222148799 7386074 2013757..2014815 1 NC_011989.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2014815 queA 7386074 queA Agrobacterium vitis S4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002549756.1 2013757 D 311402 CDS YP_002549757.1 222148800 7386075 2014818..2015948 1 NC_011989.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2015948 tgt 7386075 tgt Agrobacterium vitis S4 queuine tRNA-ribosyltransferase YP_002549757.1 2014818 D 311402 CDS YP_002549758.1 222148801 7386076 complement(2015962..2016249) 1 NC_011989.1 hypothetical protein 2016249 7386076 Avi_2452 Agrobacterium vitis S4 hypothetical protein YP_002549758.1 2015962 R 311402 CDS YP_002549759.1 222148802 7386077 2016588..2017343 1 NC_011989.1 hypothetical protein 2017343 7386077 Avi_2453 Agrobacterium vitis S4 hypothetical protein YP_002549759.1 2016588 D 311402 CDS YP_002549760.1 222148803 7386078 2017444..2018031 1 NC_011989.1 hypothetical protein 2018031 7386078 Avi_2454 Agrobacterium vitis S4 hypothetical protein YP_002549760.1 2017444 D 311402 CDS YP_002549761.1 222148804 7386079 complement(2018179..2019111) 1 NC_011989.1 hypothetical protein 2019111 7386079 Avi_2455 Agrobacterium vitis S4 hypothetical protein YP_002549761.1 2018179 R 311402 CDS YP_002549762.1 222148805 7386080 complement(2019186..2021477) 1 NC_011989.1 dehydrogenase 2021477 7386080 Avi_2456 Agrobacterium vitis S4 dehydrogenase YP_002549762.1 2019186 R 311402 CDS YP_002549763.1 222148806 7386081 complement(2021474..2022457) 1 NC_011989.1 oxidoreductase 2022457 7386081 Avi_2457 Agrobacterium vitis S4 oxidoreductase YP_002549763.1 2021474 R 311402 CDS YP_002549764.1 222148807 7386082 complement(2022457..2022930) 1 NC_011989.1 oxidoreductase with iron-sulfur subunit 2022930 7386082 Avi_2459 Agrobacterium vitis S4 oxidoreductase with iron-sulfur subunit YP_002549764.1 2022457 R 311402 CDS YP_002549765.1 222148808 7386994 2023173..2023868 1 NC_011989.1 TetR family transcriptional regulator 2023868 7386994 Avi_2460 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002549765.1 2023173 D 311402 CDS YP_002549766.1 222148809 7385835 complement(2023875..2024747) 1 NC_011989.1 hypothetical protein 2024747 7385835 Avi_2461 Agrobacterium vitis S4 hypothetical protein YP_002549766.1 2023875 R 311402 CDS YP_002549767.1 222148810 7385836 complement(2025032..2027650) 1 NC_011989.1 two component sensor kinase 2027650 cckA 7385836 cckA Agrobacterium vitis S4 two component sensor kinase YP_002549767.1 2025032 R 311402 CDS YP_002549768.1 222148811 7385837 2028093..2029565 1 NC_011989.1 hypothetical protein 2029565 7385837 Avi_2465 Agrobacterium vitis S4 hypothetical protein YP_002549768.1 2028093 D 311402 CDS YP_002549769.1 222148812 7385838 complement(2029988..2030428) 1 NC_011989.1 RNA polymerase-binding protein DksA 2030428 dksA 7385838 dksA Agrobacterium vitis S4 RNA polymerase-binding protein DksA YP_002549769.1 2029988 R 311402 CDS YP_002549770.1 222148813 7385839 2030704..2031204 1 NC_011989.1 hypothetical protein 2031204 7385839 Avi_2469 Agrobacterium vitis S4 hypothetical protein YP_002549770.1 2030704 D 311402 CDS YP_002549771.1 222148814 7385840 2031344..2032813 1 NC_011989.1 hypothetical protein 2032813 7385840 Avi_2470 Agrobacterium vitis S4 hypothetical protein YP_002549771.1 2031344 D 311402 CDS YP_002549772.1 222148815 7385841 2032810..2033907 1 NC_011989.1 hypothetical protein 2033907 7385841 Avi_2471 Agrobacterium vitis S4 hypothetical protein YP_002549772.1 2032810 D 311402 CDS YP_002549773.1 222148816 7385842 2034060..2034608 1 NC_011989.1 hypothetical protein 2034608 7385842 Avi_2472 Agrobacterium vitis S4 hypothetical protein YP_002549773.1 2034060 D 311402 CDS YP_002549774.1 222148817 7385843 complement(2034782..2035837) 1 NC_011989.1 agmatinase 2035837 speB 7385843 speB Agrobacterium vitis S4 agmatinase YP_002549774.1 2034782 R 311402 CDS YP_002549775.1 222148818 7385844 complement(2035863..2037044) 1 NC_011989.1 hypothetical protein 2037044 aspB 7385844 aspB Agrobacterium vitis S4 hypothetical protein YP_002549775.1 2035863 R 311402 CDS YP_002549776.1 222148819 7385845 2037474..2038898 1 NC_011989.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 2038898 sthA 7385845 sthA Agrobacterium vitis S4 soluble pyridine nucleotide transhydrogenase YP_002549776.1 2037474 D 311402 CDS YP_002549777.1 222148820 7385846 complement(2038956..2039708) 1 NC_011989.1 exported protein 2039708 7385846 Avi_2477 Agrobacterium vitis S4 exported protein YP_002549777.1 2038956 R 311402 CDS YP_002549778.1 222148821 7385847 complement(2039887..2041368) 1 NC_011989.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2041368 tig 7385847 tig Agrobacterium vitis S4 trigger factor YP_002549778.1 2039887 R 311402 CDS YP_002549779.1 222148822 7387175 complement(2041970..2042551) 1 NC_011989.1 hypothetical protein 2042551 7387175 Avi_2479 Agrobacterium vitis S4 hypothetical protein YP_002549779.1 2041970 R 311402 CDS YP_002549780.1 222148823 7385849 complement(2042548..2043660) 1 NC_011989.1 membrane protein 2043660 7385849 Avi_2480 Agrobacterium vitis S4 membrane protein YP_002549780.1 2042548 R 311402 CDS YP_002549781.1 222148824 7385850 2044292..2044441 1 NC_011989.1 hypothetical protein 2044441 7385850 Avi_2481 Agrobacterium vitis S4 hypothetical protein YP_002549781.1 2044292 D 311402 CDS YP_002549782.1 222148825 7385851 complement(2044645..2045184) 1 NC_011989.1 hypothetical protein 2045184 7385851 Avi_2483 Agrobacterium vitis S4 hypothetical protein YP_002549782.1 2044645 R 311402 CDS YP_002549783.1 222148826 7385852 complement(2045186..2046493) 1 NC_011989.1 recombination factor protein RarA 2046493 7385852 Avi_2484 Agrobacterium vitis S4 recombination factor protein RarA YP_002549783.1 2045186 R 311402 CDS YP_002549784.1 222148827 7385853 complement(2046490..2047893) 1 NC_011989.1 serine protease 2047893 htrA 7385853 htrA Agrobacterium vitis S4 serine protease YP_002549784.1 2046490 R 311402 CDS YP_002549785.1 222148828 7385854 2048213..2048512 1 NC_011989.1 hypothetical protein 2048512 7385854 Avi_2487 Agrobacterium vitis S4 hypothetical protein YP_002549785.1 2048213 D 311402 CDS YP_002549786.1 222148829 7385855 2048602..2049111 1 NC_011989.1 hypothetical protein 2049111 7385855 Avi_2489 Agrobacterium vitis S4 hypothetical protein YP_002549786.1 2048602 D 311402 CDS YP_002549787.1 222148830 7385856 2049163..2050764 1 NC_011989.1 hypothetical protein 2050764 7385856 Avi_2490 Agrobacterium vitis S4 hypothetical protein YP_002549787.1 2049163 D 311402 CDS YP_002549788.1 222148831 7385857 2050914..2051249 1 NC_011989.1 hypothetical protein 2051249 7385857 Avi_2491 Agrobacterium vitis S4 hypothetical protein YP_002549788.1 2050914 D 311402 CDS YP_002549789.1 222148832 7385858 2051413..2053416 1 NC_011989.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 2053416 cpdB 7385858 cpdB Agrobacterium vitis S4 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein YP_002549789.1 2051413 D 311402 CDS YP_002549790.1 222148833 7385859 complement(2053493..2053819) 1 NC_011989.1 hypothetical protein 2053819 7385859 Avi_2493 Agrobacterium vitis S4 hypothetical protein YP_002549790.1 2053493 R 311402 CDS YP_002549791.1 222148834 7385860 complement(2053959..2054996) 1 NC_011989.1 glycosyl transferase family 2 2054996 7385860 Avi_2495 Agrobacterium vitis S4 glycosyl transferase family 2 YP_002549791.1 2053959 R 311402 CDS YP_002549792.1 222148835 7385861 2055687..2056937 1 NC_011989.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2056937 ilvA 7385861 ilvA Agrobacterium vitis S4 threonine dehydratase YP_002549792.1 2055687 D 311402 CDS YP_002549793.1 222148836 7385862 2057302..2058375 1 NC_011989.1 taurine transport system protein 2058375 7385862 Avi_2497 Agrobacterium vitis S4 taurine transport system protein YP_002549793.1 2057302 D 311402 CDS YP_002549794.1 222148837 7385863 2058449..2059267 1 NC_011989.1 aliphatic sulfonate ABC transporter permease 2059267 7385863 Avi_2498 Agrobacterium vitis S4 aliphatic sulfonate ABC transporter permease YP_002549794.1 2058449 D 311402 CDS YP_002549795.1 222148838 7385864 2059240..2060079 1 NC_011989.1 ABC transporter ATPase 2060079 7385864 Avi_2499 Agrobacterium vitis S4 ABC transporter ATPase YP_002549795.1 2059240 D 311402 CDS YP_002549796.1 222148839 7385865 2060090..2060917 1 NC_011989.1 hypothetical protein 2060917 7385865 Avi_2500 Agrobacterium vitis S4 hypothetical protein YP_002549796.1 2060090 D 311402 CDS YP_002549797.1 222148840 7385866 2060929..2061579 1 NC_011989.1 hypothetical protein 2061579 7385866 Avi_2501 Agrobacterium vitis S4 hypothetical protein YP_002549797.1 2060929 D 311402 CDS YP_002549798.1 222148841 7385867 2061583..2065314 1 NC_011989.1 propionyl-coenzyme A carboxylase alpha polypeptide 2065314 pccA 7385867 pccA Agrobacterium vitis S4 propionyl-coenzyme A carboxylase alpha polypeptide YP_002549798.1 2061583 D 311402 CDS YP_002549799.1 222148842 7385868 2065518..2066159 1 NC_011989.1 hypothetical protein 2066159 7385868 Avi_2503 Agrobacterium vitis S4 hypothetical protein YP_002549799.1 2065518 D 311402 CDS YP_002549800.1 222148843 7385869 2066253..2067191 1 NC_011989.1 permease 2067191 7385869 Avi_2504 Agrobacterium vitis S4 permease YP_002549800.1 2066253 D 311402 CDS YP_002549801.1 222148844 7385870 2067393..2067926 1 NC_011989.1 hypothetical protein 2067926 7385870 Avi_2505 Agrobacterium vitis S4 hypothetical protein YP_002549801.1 2067393 D 311402 CDS YP_002549802.1 222148845 7385871 2068014..2069141 1 NC_011989.1 alcohol dehydrogenase class III 2069141 adhC 7385871 adhC Agrobacterium vitis S4 alcohol dehydrogenase class III YP_002549802.1 2068014 D 311402 CDS YP_002549803.1 222148846 7385872 2069138..2069614 1 NC_011989.1 acetyltransferase 2069614 7385872 Avi_2507 Agrobacterium vitis S4 acetyltransferase YP_002549803.1 2069138 D 311402 CDS YP_002549804.1 222148847 7385873 2069620..2070084 1 NC_011989.1 hypothetical protein 2070084 7385873 Avi_2508 Agrobacterium vitis S4 hypothetical protein YP_002549804.1 2069620 D 311402 CDS YP_002549805.1 222148848 7385874 2070081..2070752 1 NC_011989.1 hypothetical protein 2070752 7385874 Avi_2509 Agrobacterium vitis S4 hypothetical protein YP_002549805.1 2070081 D 311402 CDS YP_002549806.1 222148849 7385875 2070781..2071602 1 NC_011989.1 S-formylglutathione hydrolase 2071602 fghA 7385875 fghA Agrobacterium vitis S4 S-formylglutathione hydrolase YP_002549806.1 2070781 D 311402 CDS YP_002549807.1 222148850 7385876 complement(2071675..2072850) 1 NC_011989.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 2072850 lpxB 7385876 lpxB Agrobacterium vitis S4 lipid-A-disaccharide synthase YP_002549807.1 2071675 R 311402 CDS YP_002549808.1 222148851 7385877 complement(2072894..2073766) 1 NC_011989.1 hypothetical protein 2073766 7385877 Avi_2512 Agrobacterium vitis S4 hypothetical protein YP_002549808.1 2072894 R 311402 CDS YP_002549809.1 222148852 7385878 complement(2073770..2074585) 1 NC_011989.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2074585 lpxA 7385878 lpxA Agrobacterium vitis S4 UDP-N-acetylglucosamine acyltransferase YP_002549809.1 2073770 R 311402 CDS YP_002549810.1 222148853 7385879 complement(2074582..2075046) 1 NC_011989.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2075046 fabZ 7385879 fabZ Agrobacterium vitis S4 (3R)-hydroxymyristoyl-ACP dehydratase YP_002549810.1 2074582 R 311402 CDS YP_002549811.1 222148854 7385880 complement(2075043..2076110) 1 NC_011989.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2076110 lpxD 7385880 lpxD Agrobacterium vitis S4 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002549811.1 2075043 R 311402 CDS YP_002549812.1 222148855 7385881 complement(2076159..2078495) 1 NC_011989.1 group 1 outer membrane protein precursor 2078495 omp1 7385881 omp1 Agrobacterium vitis S4 group 1 outer membrane protein precursor YP_002549812.1 2076159 R 311402 CDS YP_002549813.1 222148856 7385882 complement(2078690..2079811) 1 NC_011989.1 zinc metallopeptidase 2079811 7385882 Avi_2518 Agrobacterium vitis S4 zinc metallopeptidase YP_002549813.1 2078690 R 311402 CDS YP_002549814.1 222148857 7385883 complement(2079923..2080765) 1 NC_011989.1 phosphatidate cytidylyltransferase 2080765 cdsA 7385883 cdsA Agrobacterium vitis S4 phosphatidate cytidylyltransferase YP_002549814.1 2079923 R 311402 CDS YP_002549815.1 222148858 7385884 complement(2080772..2081518) 1 NC_011989.1 UDP pyrophosphate synthase 2081518 uppS 7385884 uppS Agrobacterium vitis S4 UDP pyrophosphate synthase YP_002549815.1 2080772 R 311402 CDS YP_002549816.1 222148859 7385885 complement(2081563..2082123) 1 NC_011989.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2082123 frr 7385885 frr Agrobacterium vitis S4 ribosome recycling factor YP_002549816.1 2081563 R 311402 CDS YP_002549817.1 222148860 7385886 complement(2082211..2082933) 1 NC_011989.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2082933 pyrH 7385886 pyrH Agrobacterium vitis S4 uridylate kinase YP_002549817.1 2082211 R 311402 CDS YP_002549818.1 222148861 7385887 complement(2083151..2084077) 1 NC_011989.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2084077 tsf 7385887 tsf Agrobacterium vitis S4 elongation factor Ts YP_002549818.1 2083151 R 311402 CDS YP_002549819.1 222148862 7385888 complement(2084370..2085116) 1 NC_011989.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2085116 rpsB 7385888 rpsB Agrobacterium vitis S4 30S ribosomal protein S2 YP_002549819.1 2084370 R 311402 CDS YP_002549820.1 222148863 7385889 complement(2085427..2086245) 1 NC_011989.1 hypothetical protein 2086245 7385889 Avi_2529 Agrobacterium vitis S4 hypothetical protein YP_002549820.1 2085427 R 311402 CDS YP_002549821.1 222148864 7385890 2086370..2086840 1 NC_011989.1 hypothetical protein 2086840 7385890 Avi_2531 Agrobacterium vitis S4 hypothetical protein YP_002549821.1 2086370 D 311402 CDS YP_002549822.1 222148865 7385891 2086837..2087562 1 NC_011989.1 glycerophosphoryl diester phosphodiesterase 2087562 7385891 Avi_2532 Agrobacterium vitis S4 glycerophosphoryl diester phosphodiesterase YP_002549822.1 2086837 D 311402 CDS YP_002549823.1 222148866 7385892 2087580..2088788 1 NC_011989.1 hypothetical protein 2088788 7385892 Avi_2533 Agrobacterium vitis S4 hypothetical protein YP_002549823.1 2087580 D 311402 CDS YP_002549824.1 222148867 7385893 2088844..2089269 1 NC_011989.1 HIT family protein 2089269 7385893 Avi_2534 Agrobacterium vitis S4 HIT family protein YP_002549824.1 2088844 D 311402 CDS YP_002549825.1 222148868 7385894 complement(2089366..2089698) 1 NC_011989.1 hypothetical protein 2089698 7385894 Avi_2535 Agrobacterium vitis S4 hypothetical protein YP_002549825.1 2089366 R 311402 CDS YP_002549826.1 222148869 7385895 complement(2089695..2090417) 1 NC_011989.1 branched-chain amino acid permease 2090417 7385895 Avi_2536 Agrobacterium vitis S4 branched-chain amino acid permease YP_002549826.1 2089695 R 311402 CDS YP_002549827.1 222148870 7385896 complement(2090601..2093093) 1 NC_011989.1 ATP-dependent Clp protease ATP-binding subunit 2093093 clpA 7385896 clpA Agrobacterium vitis S4 ATP-dependent Clp protease ATP-binding subunit YP_002549827.1 2090601 R 311402 CDS YP_002549828.1 222148871 7385897 complement(2093098..2093451) 1 NC_011989.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 2093451 clpS 7385897 clpS Agrobacterium vitis S4 ATP-dependent Clp protease adaptor protein ClpS YP_002549828.1 2093098 R 311402 CDS YP_002549829.1 222148872 7385898 complement(2093857..2094210) 1 NC_011989.1 hypothetical protein 2094210 7385898 Avi_2539 Agrobacterium vitis S4 hypothetical protein YP_002549829.1 2093857 R 311402 CDS YP_002549830.1 222148873 7385899 complement(2094401..2094736) 1 NC_011989.1 hypothetical protein 2094736 7385899 Avi_2541 Agrobacterium vitis S4 hypothetical protein YP_002549830.1 2094401 R 311402 CDS YP_002549831.1 222148874 7385900 complement(2094952..2095776) 1 NC_011989.1 serine acetyltransferase 2095776 cysE 7385900 cysE Agrobacterium vitis S4 serine acetyltransferase YP_002549831.1 2094952 R 311402 CDS YP_002549832.1 222148875 7385901 2095849..2096652 1 NC_011989.1 enoyl-CoA hydratase 2096652 fad 7385901 fad Agrobacterium vitis S4 enoyl-CoA hydratase YP_002549832.1 2095849 D 311402 CDS YP_002549833.1 222148876 7385902 complement(2096659..2097444) 1 NC_011989.1 hydrolase 2097444 7385902 Avi_2545 Agrobacterium vitis S4 hydrolase YP_002549833.1 2096659 R 311402 CDS YP_002549834.1 222148877 7385903 2097847..2098092 1 NC_011989.1 hypothetical protein 2098092 7385903 Avi_2547 Agrobacterium vitis S4 hypothetical protein YP_002549834.1 2097847 D 311402 CDS YP_002549835.1 222148878 7385904 2098644..2099309 1 NC_011989.1 salicylate hydroxylase 2099309 nah 7385904 nah Agrobacterium vitis S4 salicylate hydroxylase YP_002549835.1 2098644 D 311402 CDS YP_002549836.1 222148879 7385905 complement(2099360..2100550) 1 NC_011989.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 2100550 metC 7385905 metC Agrobacterium vitis S4 cystathionine beta-lyase YP_002549836.1 2099360 R 311402 CDS YP_002549837.1 222148880 7385906 2100990..2102015 1 NC_011989.1 amino acid ABC transporter substrate-binding protein 2102015 7385906 Avi_2551 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002549837.1 2100990 D 311402 CDS YP_002549838.1 222148881 7385907 2102148..2103344 1 NC_011989.1 amino acid ABC transporter permease 2103344 7385907 Avi_2552 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002549838.1 2102148 D 311402 CDS YP_002549839.1 222148882 7385908 2103316..2104503 1 NC_011989.1 amino acid ABC transporter permease 2104503 7385908 Avi_2553 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002549839.1 2103316 D 311402 CDS YP_002549840.1 222148883 7385909 2104615..2105385 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (amino acid) 2105385 7385909 Avi_2554 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (amino acid) YP_002549840.1 2104615 D 311402 CDS YP_002549841.1 222148884 7385911 complement(2107107..2109770) 1 NC_011989.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2109770 alaS 7385911 alaS Agrobacterium vitis S4 alanyl-tRNA synthetase YP_002549841.1 2107107 R 311402 CDS YP_002549842.1 222148885 7385912 complement(2109940..2111028) 1 NC_011989.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2111028 recA 7385912 recA Agrobacterium vitis S4 recombinase A YP_002549842.1 2109940 R 311402 CDS YP_002549843.1 222148886 7385913 2111275..2112240 1 NC_011989.1 carbohydrate kinase 2112240 7385913 Avi_2559 Agrobacterium vitis S4 carbohydrate kinase YP_002549843.1 2111275 D 311402 CDS YP_002549844.1 222148887 7385914 2112237..2113160 1 NC_011989.1 hypothetical protein 2113160 7385914 Avi_2560 Agrobacterium vitis S4 hypothetical protein YP_002549844.1 2112237 D 311402 CDS YP_002549845.1 222148888 7385915 2113551..2114270 1 NC_011989.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 2114270 lexA 7385915 lexA Agrobacterium vitis S4 LexA repressor YP_002549845.1 2113551 D 311402 CDS YP_002549846.1 222148889 7385916 complement(2114251..2117274) 1 NC_011989.1 hypothetical protein 2117274 7385916 Avi_2562 Agrobacterium vitis S4 hypothetical protein YP_002549846.1 2114251 R 311402 CDS YP_002549847.1 222148890 7386580 2117619..2118908 1 NC_011989.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2118908 gltA 7386580 gltA Agrobacterium vitis S4 type II citrate synthase YP_002549847.1 2117619 D 311402 CDS YP_002549848.1 222148891 7386581 2119106..2120995 1 NC_011989.1 peptidyl-prolyl cis-trans isomerase 2120995 ppiD 7386581 ppiD Agrobacterium vitis S4 peptidyl-prolyl cis-trans isomerase YP_002549848.1 2119106 D 311402 CDS YP_002549849.1 222148892 7386582 2121017..2122039 1 NC_011989.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2122039 trpD 7386582 trpD Agrobacterium vitis S4 anthranilate phosphoribosyltransferase YP_002549849.1 2121017 D 311402 CDS YP_002549850.1 222148893 7386583 2122036..2122851 1 NC_011989.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 2122851 trpC 7386583 trpC Agrobacterium vitis S4 indole-3-glycerol-phosphate synthase YP_002549850.1 2122036 D 311402 CDS YP_002549851.1 222148894 7386584 2122848..2123333 1 NC_011989.1 molybdenum cofactor biosynthesis protein C 2123333 moaC 7386584 moaC Agrobacterium vitis S4 molybdenum cofactor biosynthesis protein C YP_002549851.1 2122848 D 311402 CDS YP_002549852.1 222148895 7386585 2123333..2124550 1 NC_011989.1 molybdopterin biosynthesis protein 2124550 moeA 7386585 moeA Agrobacterium vitis S4 molybdopterin biosynthesis protein YP_002549852.1 2123333 D 311402 CDS YP_002549853.1 222148896 7386586 2124646..2125329 1 NC_011989.1 hypothetical protein 2125329 7386586 Avi_2570 Agrobacterium vitis S4 hypothetical protein YP_002549853.1 2124646 D 311402 CDS YP_002549854.1 222148897 7386587 complement(2125330..2126784) 1 NC_011989.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 2126784 cbiP 7386587 cbiP Agrobacterium vitis S4 cobyric acid synthase YP_002549854.1 2125330 R 311402 CDS YP_002549855.1 222148898 7386588 2127353..2128351 1 NC_011989.1 ABC transporter substrate-binding protein 2128351 7386588 Avi_2573 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002549855.1 2127353 D 311402 CDS YP_002549856.1 222148899 7386589 2128554..2129468 1 NC_011989.1 ABC transporter permease 2129468 7386589 Avi_2574 Agrobacterium vitis S4 ABC transporter permease YP_002549856.1 2128554 D 311402 CDS YP_002549857.1 222148900 7386590 2129461..2130513 1 NC_011989.1 ABC transporter ATPase 2130513 7386590 Avi_2575 Agrobacterium vitis S4 ABC transporter ATPase YP_002549857.1 2129461 D 311402 CDS YP_002549858.1 222148901 7386591 complement(2130609..2131661) 1 NC_011989.1 glycosyltransferase 2131661 7386591 Avi_2576 Agrobacterium vitis S4 glycosyltransferase YP_002549858.1 2130609 R 311402 CDS YP_002549859.1 222148902 7386592 2132039..2132386 1 NC_011989.1 hypothetical protein 2132386 7386592 Avi_2578 Agrobacterium vitis S4 hypothetical protein YP_002549859.1 2132039 D 311402 CDS YP_002549860.1 222148903 7386593 2132383..2134149 1 NC_011989.1 hypothetical protein 2134149 7386593 Avi_2579 Agrobacterium vitis S4 hypothetical protein YP_002549860.1 2132383 D 311402 CDS YP_002549861.1 222148904 7386594 complement(2134172..2134996) 1 NC_011989.1 hypothetical protein 2134996 7386594 Avi_2581 Agrobacterium vitis S4 hypothetical protein YP_002549861.1 2134172 R 311402 CDS YP_002549862.1 222148905 7386595 complement(2135329..2135487) 1 NC_011989.1 Entericidin B signal peptide protein 2135487 7386595 Avi_2583 Agrobacterium vitis S4 Entericidin B signal peptide protein YP_002549862.1 2135329 R 311402 CDS YP_002549863.1 222148906 7386596 2135740..2136483 1 NC_011989.1 hypothetical protein 2136483 7386596 Avi_2584 Agrobacterium vitis S4 hypothetical protein YP_002549863.1 2135740 D 311402 CDS YP_002549864.1 222148907 7386597 complement(2136500..2137879) 1 NC_011989.1 cytochrome P450 2137879 cyc 7386597 cyc Agrobacterium vitis S4 cytochrome P450 YP_002549864.1 2136500 R 311402 CDS YP_002549865.1 222148908 7386598 complement(2137979..2138953) 1 NC_011989.1 LysR family transcriptional regulator 2138953 7386598 Avi_2586 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002549865.1 2137979 R 311402 CDS YP_002549866.1 222148909 7386599 2139284..2139568 1 NC_011989.1 hypothetical protein 2139568 7386599 Avi_2589 Agrobacterium vitis S4 hypothetical protein YP_002549866.1 2139284 D 311402 CDS YP_002549867.1 222148910 7386600 2139821..2140834 1 NC_011989.1 AraC family transcriptional regulator 2140834 7386600 Avi_2590 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002549867.1 2139821 D 311402 CDS YP_002549868.1 222148911 7386601 2141142..2142338 1 NC_011989.1 hypothetical protein 2142338 7386601 Avi_2591 Agrobacterium vitis S4 hypothetical protein YP_002549868.1 2141142 D 311402 CDS YP_002549869.1 222148912 7386602 2142390..2143022 1 NC_011989.1 hypothetical protein 2143022 7386602 Avi_2593 Agrobacterium vitis S4 hypothetical protein YP_002549869.1 2142390 D 311402 CDS YP_002549870.1 222148913 7386603 2143053..2143682 1 NC_011989.1 hydrolase 2143682 7386603 Avi_2594 Agrobacterium vitis S4 hydrolase YP_002549870.1 2143053 D 311402 CDS YP_002549871.1 222148914 7386604 2143679..2145163 1 NC_011989.1 UTP-glucose-1-phosphate uridylyltransferase 2145163 exoN 7386604 exoN Agrobacterium vitis S4 UTP-glucose-1-phosphate uridylyltransferase YP_002549871.1 2143679 D 311402 CDS YP_002549872.1 222148915 7386605 2145169..2145864 1 NC_011989.1 dolichyl-phosphate mannose synthase 2145864 7386605 Avi_2596 Agrobacterium vitis S4 dolichyl-phosphate mannose synthase YP_002549872.1 2145169 D 311402 CDS YP_002549873.1 222148916 7386606 complement(2146046..2146999) 1 NC_011989.1 prokaryotic type I signal peptidase 2146999 sipf 7386606 sipf Agrobacterium vitis S4 prokaryotic type I signal peptidase YP_002549873.1 2146046 R 311402 CDS YP_002549874.1 222148917 7386607 complement(2147130..2150900) 1 NC_011989.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2150900 nrdE 7386607 nrdE Agrobacterium vitis S4 ribonucleotide-diphosphate reductase subunit alpha YP_002549874.1 2147130 R 311402 CDS YP_002549875.1 222148918 7386608 2151704..2153605 1 NC_011989.1 methyl-accepting chemotaxis protein 2153605 mcpA 7386608 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002549875.1 2151704 D 311402 CDS YP_002549876.1 222148919 7386609 complement(2153723..2154301) 1 NC_011989.1 hypothetical protein 2154301 7386609 Avi_2601 Agrobacterium vitis S4 hypothetical protein YP_002549876.1 2153723 R 311402 CDS YP_002549877.1 222148920 7386610 complement(2154401..2154898) 1 NC_011989.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 2154898 gpt 7386610 gpt Agrobacterium vitis S4 xanthine-guanine phosphoribosyltransferase YP_002549877.1 2154401 R 311402 CDS YP_002549878.1 222148921 7386611 complement(2155221..2156060) 1 NC_011989.1 hypothetical protein 2156060 7386611 Avi_2605 Agrobacterium vitis S4 hypothetical protein YP_002549878.1 2155221 R 311402 CDS YP_002549879.1 222148922 7386612 complement(2156308..2157090) 1 NC_011989.1 competence-damage associated protein 2157090 cinA 7386612 cinA Agrobacterium vitis S4 competence-damage associated protein YP_002549879.1 2156308 R 311402 CDS YP_002549880.1 222148923 7386613 complement(2157466..2159433) 1 NC_011989.1 methyl-accepting chemotaxis protein 2159433 mcpA 7386613 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002549880.1 2157466 R 311402 CDS YP_002549881.1 222148924 7387161 complement(2160480..2160953) 1 NC_011989.1 chemotaxis protein 2160953 cheW 7387161 cheW Agrobacterium vitis S4 chemotaxis protein YP_002549881.1 2160480 R 311402 CDS YP_002549882.1 222148925 7386615 complement(2161470..2161907) 1 NC_011989.1 hypothetical protein 2161907 7386615 Avi_2611 Agrobacterium vitis S4 hypothetical protein YP_002549882.1 2161470 R 311402 CDS YP_002549883.1 222148926 7386616 complement(2161953..2163356) 1 NC_011989.1 L-serine dehydratase 2163356 sdaA 7386616 sdaA Agrobacterium vitis S4 L-serine dehydratase YP_002549883.1 2161953 R 311402 CDS YP_002549884.1 222148927 7386617 2163844..2164617 1 NC_011989.1 hypothetical protein 2164617 7386617 Avi_2613 Agrobacterium vitis S4 hypothetical protein YP_002549884.1 2163844 D 311402 CDS YP_002549885.1 222148928 7386618 2164746..2165714 1 NC_011989.1 hypothetical protein 2165714 7386618 Avi_2615 Agrobacterium vitis S4 hypothetical protein YP_002549885.1 2164746 D 311402 CDS YP_002549886.1 222148929 7386619 2165726..2166202 1 NC_011989.1 Transmembrane protein 2166202 7386619 Avi_2616 Agrobacterium vitis S4 Transmembrane protein YP_002549886.1 2165726 D 311402 CDS YP_002549887.1 222148930 7386620 complement(2166250..2166642) 1 NC_011989.1 transcriptional regulator MerR family 2166642 7386620 Avi_2617 Agrobacterium vitis S4 transcriptional regulator MerR family YP_002549887.1 2166250 R 311402 CDS YP_002549888.1 222148931 7386621 complement(2166802..2168217) 1 NC_011989.1 magnesium transport protein 2168217 mgtE 7386621 mgtE Agrobacterium vitis S4 magnesium transport protein YP_002549888.1 2166802 R 311402 CDS YP_002549889.1 222148932 7386622 complement(2168339..2169310) 1 NC_011989.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 2169310 cobD 7386622 cobD Agrobacterium vitis S4 cobalamin biosynthesis protein YP_002549889.1 2168339 R 311402 CDS YP_002549890.1 222148933 7386623 complement(2169307..2170320) 1 NC_011989.1 cobalamin biosynthetic protein 2170320 cobC 7386623 cobC Agrobacterium vitis S4 cobalamin biosynthetic protein YP_002549890.1 2169307 R 311402 CDS YP_002549891.1 222148934 7386624 complement(2170317..2171627) 1 NC_011989.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 2171627 cobB 7386624 cobB Agrobacterium vitis S4 cobyrinic acid a,c-diamide synthase YP_002549891.1 2170317 R 311402 CDS YP_002549892.1 222148935 7386625 complement(2171624..2172466) 1 NC_011989.1 uroporphyrin-III C-methyltransferase 2172466 cobA 7386625 cobA Agrobacterium vitis S4 uroporphyrin-III C-methyltransferase YP_002549892.1 2171624 R 311402 CDS YP_002549893.1 222148936 7386626 2172675..2173736 1 NC_011989.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 2173736 cbiD 7386626 cbiD Agrobacterium vitis S4 cobalt-precorrin-6A synthase YP_002549893.1 2172675 D 311402 CDS YP_002549894.1 222148937 7386627 2173720..2174409 1 NC_011989.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 2174409 cobK 7386627 cobK Agrobacterium vitis S4 cobalt-precorrin-6x reductase YP_002549894.1 2173720 D 311402 CDS YP_002549895.1 222148938 7386628 complement(2174470..2175027) 1 NC_011989.1 chemotaxis protein 2175027 cheD 7386628 cheD Agrobacterium vitis S4 chemotaxis protein YP_002549895.1 2174470 R 311402 CDS YP_002549896.1 222148939 7386629 complement(2175523..2175945) 1 NC_011989.1 acetyltransferase 2175945 7386629 Avi_2631 Agrobacterium vitis S4 acetyltransferase YP_002549896.1 2175523 R 311402 CDS YP_002549897.1 222148940 7386630 complement(2176041..2177000) 1 NC_011989.1 inosine-uridine preferring nucleoside hydrolase 2177000 iunH 7386630 iunH Agrobacterium vitis S4 inosine-uridine preferring nucleoside hydrolase YP_002549897.1 2176041 R 311402 CDS YP_002549898.1 222148941 7386631 complement(2177089..2177880) 1 NC_011989.1 precorrin-4 C11-methyltransferase 2177880 cobM 7386631 cobM Agrobacterium vitis S4 precorrin-4 C11-methyltransferase YP_002549898.1 2177089 R 311402 CDS YP_002549899.1 222148942 7386632 complement(2177882..2179720) 1 NC_011989.1 precorrin-3B C17-methyltransferase 2179720 cobJ 7386632 cobJ Agrobacterium vitis S4 precorrin-3B C17-methyltransferase YP_002549899.1 2177882 R 311402 CDS YP_002549900.1 222148943 7386633 complement(2179720..2180454) 1 NC_011989.1 precorrin-2 C20-methyltransferase 2180454 cobI 7386633 cobI Agrobacterium vitis S4 precorrin-2 C20-methyltransferase YP_002549900.1 2179720 R 311402 CDS YP_002549901.1 222148944 7386634 complement(2180451..2181677) 1 NC_011989.1 precorrin-6y methyltransferase 2181677 cobL 7386634 cobL Agrobacterium vitis S4 precorrin-6y methyltransferase YP_002549901.1 2180451 R 311402 CDS YP_002549902.1 222148945 7386635 complement(2181670..2183169) 1 NC_011989.1 precorrin isomerase 2183169 cobH 7386635 cobH Agrobacterium vitis S4 precorrin isomerase YP_002549902.1 2181670 R 311402 CDS YP_002549903.1 222148946 7386636 complement(2183322..2184653) 1 NC_011989.1 hypothetical protein 2184653 7386636 Avi_2641 Agrobacterium vitis S4 hypothetical protein YP_002549903.1 2183322 R 311402 CDS YP_002549904.1 222148947 7386637 2184990..2185775 1 NC_011989.1 hypothetical protein 2185775 7386637 Avi_2642 Agrobacterium vitis S4 hypothetical protein YP_002549904.1 2184990 D 311402 CDS YP_002549905.1 222148948 7386638 2185840..2186088 1 NC_011989.1 hypothetical protein 2186088 7386638 Avi_2643 Agrobacterium vitis S4 hypothetical protein YP_002549905.1 2185840 D 311402 CDS YP_002549906.1 222148949 7386639 2186085..2186387 1 NC_011989.1 plasmid stabilization protein 2186387 7386639 Avi_2644 Agrobacterium vitis S4 plasmid stabilization protein YP_002549906.1 2186085 D 311402 CDS YP_002549907.1 222148950 7386640 complement(2186422..2187066) 1 NC_011989.1 cob(I)alamin adenosyltransferase 2187066 cobO 7386640 cobO Agrobacterium vitis S4 cob(I)alamin adenosyltransferase YP_002549907.1 2186422 R 311402 CDS YP_002549908.1 222148951 7386641 complement(2187063..2190845) 1 NC_011989.1 cobaltochelatase CobN subunit 2190845 cobN 7386641 cobN Agrobacterium vitis S4 cobaltochelatase CobN subunit YP_002549908.1 2187063 R 311402 CDS YP_002549909.1 222148952 7386642 complement(2190849..2191922) 1 NC_011989.1 cobalamin biosynthesis protein CobW 2191922 cobW 7386642 cobW Agrobacterium vitis S4 cobalamin biosynthesis protein CobW YP_002549909.1 2190849 R 311402 CDS YP_002549910.1 222148953 7386643 complement(2191926..2192453) 1 NC_011989.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 2192453 cobU 7386643 cobU Agrobacterium vitis S4 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase YP_002549910.1 2191926 R 311402 CDS YP_002549911.1 222148954 7386644 complement(2192458..2192760) 1 NC_011989.1 hypothetical protein 2192760 7386644 Avi_2651 Agrobacterium vitis S4 hypothetical protein YP_002549911.1 2192458 R 311402 CDS YP_002549912.1 222148955 7386645 complement(2193330..2193794) 1 NC_011989.1 hypothetical protein 2193794 7386645 Avi_2652 Agrobacterium vitis S4 hypothetical protein YP_002549912.1 2193330 R 311402 CDS YP_002549913.1 222148956 7386646 2194245..2194388 1 NC_011989.1 hypothetical protein 2194388 7386646 Avi_2653 Agrobacterium vitis S4 hypothetical protein YP_002549913.1 2194245 D 311402 CDS YP_002549914.1 222148957 7386647 2194542..2195999 1 NC_011989.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 2195999 gidA 7386647 gidA Agrobacterium vitis S4 tRNA (uracil-5-)-methyltransferase Gid YP_002549914.1 2194542 D 311402 CDS YP_002549915.1 222148958 7386648 complement(2196071..2196715) 1 NC_011989.1 hypothetical protein 2196715 7386648 Avi_2655 Agrobacterium vitis S4 hypothetical protein YP_002549915.1 2196071 R 311402 CDS YP_002549916.1 222148959 7386649 complement(2196779..2197591) 1 NC_011989.1 phytoene synthase 2197591 crtB 7386649 crtB Agrobacterium vitis S4 phytoene synthase YP_002549916.1 2196779 R 311402 CDS YP_002549917.1 222148960 7386650 complement(2197647..2198033) 1 NC_011989.1 hypothetical protein 2198033 7386650 Avi_2657 Agrobacterium vitis S4 hypothetical protein YP_002549917.1 2197647 R 311402 CDS YP_002549918.1 222148961 7386651 complement(2198037..2200607) 1 NC_011989.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 2200607 secD 7386651 secD Agrobacterium vitis S4 bifunctional preprotein translocase subunit SecD/SecF YP_002549918.1 2198037 R 311402 CDS YP_002549919.1 222148962 7386652 complement(2200817..2201188) 1 NC_011989.1 preprotein tranlocase 2201188 yajC 7386652 yajC Agrobacterium vitis S4 preprotein tranlocase YP_002549919.1 2200817 R 311402 CDS YP_002549920.1 222148963 7386653 2201398..2202264 1 NC_011989.1 hypothetical protein 2202264 7386653 Avi_2661 Agrobacterium vitis S4 hypothetical protein YP_002549920.1 2201398 D 311402 CDS YP_002549921.1 222148964 7386654 complement(2202380..2203996) 1 NC_011989.1 lipoprotein 2203996 7386654 Avi_2662 Agrobacterium vitis S4 lipoprotein YP_002549921.1 2202380 R 311402 CDS YP_002549922.1 222148965 7386655 complement(2204248..2204901) 1 NC_011989.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 2204901 pcm 7386655 pcm Agrobacterium vitis S4 protein-L-isoaspartate O-methyltransferase YP_002549922.1 2204248 R 311402 CDS YP_002549923.1 222148966 7386656 complement(2204898..2205668) 1 NC_011989.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 2205668 surE 7386656 surE Agrobacterium vitis S4 stationary phase survival protein SurE YP_002549923.1 2204898 R 311402 CDS YP_002549924.1 222148967 7386657 complement(2205803..2207086) 1 NC_011989.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2207086 serS 7386657 serS Agrobacterium vitis S4 seryl-tRNA synthetase YP_002549924.1 2205803 R 311402 CDS YP_002549925.1 222148968 7386658 complement(2207128..2207940) 1 NC_011989.1 SEC-independent protein translocase 2207940 tatC 7386658 tatC Agrobacterium vitis S4 SEC-independent protein translocase YP_002549925.1 2207128 R 311402 CDS YP_002549926.1 222148969 7386659 complement(2207937..2208887) 1 NC_011989.1 SEC-independent protein translocase 2208887 tatB 7386659 tatB Agrobacterium vitis S4 SEC-independent protein translocase YP_002549926.1 2207937 R 311402 CDS YP_002549927.1 222148970 7386660 complement(2208982..2209197) 1 NC_011989.1 SEC-independent protein translocase 2209197 tatA 7386660 tatA Agrobacterium vitis S4 SEC-independent protein translocase YP_002549927.1 2208982 R 311402 CDS YP_002549928.1 222148971 7386661 complement(2209392..2210108) 1 NC_011989.1 hypothetical protein 2210108 7386661 Avi_2670 Agrobacterium vitis S4 hypothetical protein YP_002549928.1 2209392 R 311402 CDS YP_002549929.1 222148972 7388341 complement(2210114..2210935) 1 NC_011989.1 hypothetical protein 2210935 7388341 Avi_2671 Agrobacterium vitis S4 hypothetical protein YP_002549929.1 2210114 R 311402 CDS YP_002549930.1 222148973 7388342 complement(2210995..2212011) 1 NC_011989.1 glycosyl hydrolase 2212011 7388342 Avi_2673 Agrobacterium vitis S4 glycosyl hydrolase YP_002549930.1 2210995 R 311402 CDS YP_002549931.1 222148974 7388343 complement(2212176..2214911) 1 NC_011989.1 hypothetical protein 2214911 7388343 Avi_2674 Agrobacterium vitis S4 hypothetical protein YP_002549931.1 2212176 R 311402 CDS YP_002549932.1 222148975 7388344 complement(2214938..2216695) 1 NC_011989.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2216695 argS 7388344 argS Agrobacterium vitis S4 arginyl-tRNA synthetase YP_002549932.1 2214938 R 311402 CDS YP_002549933.1 222148976 7388345 complement(2216758..2217975) 1 NC_011989.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2217975 dgt 7388345 dgt Agrobacterium vitis S4 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_002549933.1 2216758 R 311402 CDS YP_002549934.1 222148977 7388346 2218170..2218502 1 NC_011989.1 hypothetical protein 2218502 7388346 Avi_2678 Agrobacterium vitis S4 hypothetical protein YP_002549934.1 2218170 D 311402 CDS YP_002549935.1 222148978 7388347 2218589..2219383 1 NC_011989.1 exonuclease III 2219383 7388347 Avi_2680 Agrobacterium vitis S4 exonuclease III YP_002549935.1 2218589 D 311402 CDS YP_002549936.1 222148979 7388348 complement(2219407..2220222) 1 NC_011989.1 exopolysaccharide production negative regulator 2220222 exoR 7388348 exoR Agrobacterium vitis S4 exopolysaccharide production negative regulator YP_002549936.1 2219407 R 311402 CDS YP_002549937.1 222148980 7388349 complement(2220929..2221966) 1 NC_011989.1 long-chain fatty acid transport protein 2221966 fadL 7388349 fadL Agrobacterium vitis S4 long-chain fatty acid transport protein YP_002549937.1 2220929 R 311402 CDS YP_002549938.1 222148981 7388350 complement(2222633..2225476) 1 NC_011989.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2225476 valS 7388350 valS Agrobacterium vitis S4 valyl-tRNA synthetase YP_002549938.1 2222633 R 311402 CDS YP_002549939.1 222148982 7388351 complement(2225690..2226613) 1 NC_011989.1 hypothetical protein 2226613 7388351 Avi_2684 Agrobacterium vitis S4 hypothetical protein YP_002549939.1 2225690 R 311402 CDS YP_002549940.1 222148983 7388352 complement(2226919..2228337) 1 NC_011989.1 Outer membrane secretion protein 2228337 7388352 Avi_2686 Agrobacterium vitis S4 Outer membrane secretion protein YP_002549940.1 2226919 R 311402 CDS YP_002549941.1 222148984 7388353 complement(2228948..2229571) 1 NC_011989.1 protein-L-isoaspartate O-methyltransferase 2229571 pcm 7388353 pcm Agrobacterium vitis S4 protein-L-isoaspartate O-methyltransferase YP_002549941.1 2228948 R 311402 CDS YP_002549942.1 222148985 7388354 2230167..2230682 1 NC_011989.1 hypothetical protein 2230682 7388354 Avi_2689 Agrobacterium vitis S4 hypothetical protein YP_002549942.1 2230167 D 311402 CDS YP_002549943.1 222148986 7388355 2231338..2231841 1 NC_011989.1 hypothetical protein 2231841 7388355 Avi_2691 Agrobacterium vitis S4 hypothetical protein YP_002549943.1 2231338 D 311402 CDS YP_002549944.1 222148987 7388356 complement(2232179..2232997) 1 NC_011989.1 arabinose phosphate phosphatase 2232997 accG 7388356 accG Agrobacterium vitis S4 arabinose phosphate phosphatase YP_002549944.1 2232179 R 311402 CDS YP_002549945.1 222148988 7388357 complement(2232990..2233790) 1 NC_011989.1 agrocinopine phosphodiesterase 2233790 accF 7388357 accF Agrobacterium vitis S4 agrocinopine phosphodiesterase YP_002549945.1 2232990 R 311402 CDS YP_002549946.1 222148989 7388358 complement(2233807..2234673) 1 NC_011989.1 agrocinopine ABC transporter permease 2234673 accE 7388358 accE Agrobacterium vitis S4 agrocinopine ABC transporter permease YP_002549946.1 2233807 R 311402 CDS YP_002549947.1 222148990 7388359 complement(2234675..2235592) 1 NC_011989.1 agrocinopine ABC transporter permease 2235592 accD 7388359 accD Agrobacterium vitis S4 agrocinopine ABC transporter permease YP_002549947.1 2234675 R 311402 CDS YP_002549948.1 222148991 7388360 complement(2235589..2236638) 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (agrocinopine) 2236638 accC 7388360 accC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (agrocinopine) YP_002549948.1 2235589 R 311402 CDS YP_002549949.1 222148992 7388361 complement(2236635..2237570) 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (agrocinopine) 2237570 accB 7388361 accB Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (agrocinopine) YP_002549949.1 2236635 R 311402 CDS YP_002549950.1 222148993 7388362 complement(2237638..2239203) 1 NC_011989.1 ABC transporter substrate binding protein (agrocinopine) 2239203 accA 7388362 accA Agrobacterium vitis S4 ABC transporter substrate binding protein (agrocinopine) YP_002549950.1 2237638 R 311402 CDS YP_002549951.1 222148994 7388363 complement(2239252..2240064) 1 NC_011989.1 transcriptional regulator 2240064 accR 7388363 accR Agrobacterium vitis S4 transcriptional regulator YP_002549951.1 2239252 R 311402 CDS YP_002549952.1 222148995 7388364 complement(2240777..2241691) 1 NC_011989.1 Transcriptional regulator 2241691 7388364 Avi_2704 Agrobacterium vitis S4 Transcriptional regulator YP_002549952.1 2240777 R 311402 CDS YP_002549953.1 222148996 7388365 2241807..2242835 1 NC_011989.1 ABC transporter substrate binding protein (spermidine/putrescine) 2242835 7388365 Avi_2705 Agrobacterium vitis S4 ABC transporter substrate binding protein (spermidine/putrescine) YP_002549953.1 2241807 D 311402 CDS YP_002549954.1 222148997 7388366 2242904..2243947 1 NC_011989.1 ABC transporter ATPase 2243947 7388366 Avi_2706 Agrobacterium vitis S4 ABC transporter ATPase YP_002549954.1 2242904 D 311402 CDS YP_002549955.1 222148998 7388367 2244031..2244810 1 NC_011989.1 mannopine ABC transporter permease 2244810 attA2 7388367 attA2 Agrobacterium vitis S4 mannopine ABC transporter permease YP_002549955.1 2244031 D 311402 CDS YP_002549956.1 222148999 7388368 2244820..2245614 1 NC_011989.1 polyamine ABC transporter permease 2245614 7388368 Avi_2708 Agrobacterium vitis S4 polyamine ABC transporter permease YP_002549956.1 2244820 D 311402 CDS YP_002549957.1 222149000 7388369 2245618..2246712 1 NC_011989.1 D-nopaline dehydrogenase 2246712 noxB 7388369 noxB Agrobacterium vitis S4 D-nopaline dehydrogenase YP_002549957.1 2245618 D 311402 CDS YP_002549958.1 222149001 7388370 2246705..2246998 1 NC_011989.1 hypothetical protein 2246998 7388370 Avi_2710 Agrobacterium vitis S4 hypothetical protein YP_002549958.1 2246705 D 311402 CDS YP_002549959.1 222149002 7388371 2247001..2248395 1 NC_011989.1 D-nopaline dehydrogenase 2248395 noxA 7388371 noxA Agrobacterium vitis S4 D-nopaline dehydrogenase YP_002549959.1 2247001 D 311402 CDS YP_002549960.1 222149003 7388372 complement(2249072..2250571) 1 NC_011989.1 hypothetical protein 2250571 7388372 Avi_2713 Agrobacterium vitis S4 hypothetical protein YP_002549960.1 2249072 R 311402 CDS YP_002549961.1 222149004 7388373 2250589..2251116 1 NC_011989.1 kinase 2251116 7388373 Avi_9914 Agrobacterium vitis S4 kinase YP_002549961.1 2250589 D 311402 CDS YP_002549962.1 222149005 7387970 complement(2251648..2252676) 1 NC_011989.1 hypothetical protein 2252676 7387970 Avi_2714 Agrobacterium vitis S4 hypothetical protein YP_002549962.1 2251648 R 311402 CDS YP_002549963.1 222149006 7388374 2252792..2252926 1 NC_011989.1 IS3 family transposase 2252926 7388374 Avi_2715 Agrobacterium vitis S4 IS3 family transposase YP_002549963.1 2252792 D 311402 CDS YP_002549964.1 222149007 7388375 2253106..2253273 1 NC_011989.1 hypothetical protein 2253273 7388375 Avi_2717 Agrobacterium vitis S4 hypothetical protein YP_002549964.1 2253106 D 311402 CDS YP_002549965.1 222149008 7388376 complement(2253318..2253599) 1 NC_011989.1 hypothetical protein 2253599 7388376 Avi_2719 Agrobacterium vitis S4 hypothetical protein YP_002549965.1 2253318 R 311402 CDS YP_002549966.1 222149009 7387174 2254484..2254744 1 NC_011989.1 dehydrogenase 2254744 7387174 Avi_2721 Agrobacterium vitis S4 dehydrogenase YP_002549966.1 2254484 D 311402 CDS YP_002549967.1 222149010 7388378 complement(2254858..2255619) 1 NC_011989.1 ABC transporter permease 2255619 7388378 Avi_2722 Agrobacterium vitis S4 ABC transporter permease YP_002549967.1 2254858 R 311402 CDS YP_002549968.1 222149011 7388379 complement(2255616..2256542) 1 NC_011989.1 ABC transporter ATPase 2256542 7388379 Avi_2723 Agrobacterium vitis S4 ABC transporter ATPase YP_002549968.1 2255616 R 311402 CDS YP_002549969.1 222149012 7388380 complement(2256663..2256890) 1 NC_011989.1 GGDEF family protein 2256890 7388380 Avi_2724 Agrobacterium vitis S4 GGDEF family protein YP_002549969.1 2256663 R 311402 CDS YP_002549970.1 222149013 7388381 complement(2257092..2257925) 1 NC_011989.1 two component response regulator 2257925 rrpX 7388381 rrpX Agrobacterium vitis S4 two component response regulator YP_002549970.1 2257092 R 311402 CDS YP_002549971.1 222149014 7388382 complement(2258182..2260821) 1 NC_011989.1 dimethylglycine dehydrogenase 2260821 7388382 Avi_2727 Agrobacterium vitis S4 dimethylglycine dehydrogenase YP_002549971.1 2258182 R 311402 CDS YP_002549972.1 222149015 7388383 complement(2260931..2261779) 1 NC_011989.1 DNA-binding protein 2261779 7388383 Avi_2728 Agrobacterium vitis S4 DNA-binding protein YP_002549972.1 2260931 R 311402 CDS YP_002549973.1 222149016 7388384 2262038..2262832 1 NC_011989.1 SAM-dependent methyltransferase 2262832 7388384 Avi_2729 Agrobacterium vitis S4 SAM-dependent methyltransferase YP_002549973.1 2262038 D 311402 CDS YP_002549974.1 222149017 7388385 complement(2262881..2265358) 1 NC_011989.1 potassium efflux system KEFA 2265358 kefA 7388385 kefA Agrobacterium vitis S4 potassium efflux system KEFA YP_002549974.1 2262881 R 311402 CDS YP_002549975.1 222149018 7388386 complement(2265782..2266315) 1 NC_011989.1 hypothetical protein 2266315 7388386 Avi_2731 Agrobacterium vitis S4 hypothetical protein YP_002549975.1 2265782 R 311402 CDS YP_002549976.1 222149019 7388387 complement(2266323..2266664) 1 NC_011989.1 hypothetical protein 2266664 7388387 Avi_2732 Agrobacterium vitis S4 hypothetical protein YP_002549976.1 2266323 R 311402 CDS YP_002549977.1 222149020 7388388 2266953..2267891 1 NC_011989.1 ABC transporter substrate binding protein (hemin) 2267891 hmuT 7388388 hmuT Agrobacterium vitis S4 ABC transporter substrate binding protein (hemin) YP_002549977.1 2266953 D 311402 CDS YP_002549978.1 222149021 7388389 2267888..2268973 1 NC_011989.1 hemin ABC transporter permease 2268973 hmuU 7388389 hmuU Agrobacterium vitis S4 hemin ABC transporter permease YP_002549978.1 2267888 D 311402 CDS YP_002549979.1 222149022 7388390 2269003..2269791 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (hemin) 2269791 hmuV 7388390 hmuV Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (hemin) YP_002549979.1 2269003 D 311402 CDS YP_002549980.1 222149023 7388391 complement(2270008..2270925) 1 NC_011989.1 hypothetical protein 2270925 7388391 Avi_2737 Agrobacterium vitis S4 hypothetical protein YP_002549980.1 2270008 R 311402 CDS YP_002549981.1 222149024 7388392 2272121..2273560 1 NC_011989.1 hypothetical flagellin 2273560 7388392 Avi_2738 Agrobacterium vitis S4 hypothetical flagellin YP_002549981.1 2272121 D 311402 CDS YP_002549982.1 222149025 7388393 2273622..2275577 1 NC_011989.1 hypothetical protein 2275577 7388393 Avi_2739 Agrobacterium vitis S4 hypothetical protein YP_002549982.1 2273622 D 311402 CDS YP_002549983.1 222149026 7388394 2276103..2276972 1 NC_011989.1 hypothetical protein 2276972 7388394 Avi_2740 Agrobacterium vitis S4 hypothetical protein YP_002549983.1 2276103 D 311402 CDS YP_002549984.1 222149027 7388395 2277591..2277965 1 NC_011989.1 DNA G:T-mismatch repair endonuclease 2277965 7388395 Avi_2741 Agrobacterium vitis S4 DNA G:T-mismatch repair endonuclease YP_002549984.1 2277591 D 311402 CDS YP_002549985.1 222149028 7388396 2277962..2279440 1 NC_011989.1 DNA methylase 2279440 7388396 Avi_2742 Agrobacterium vitis S4 DNA methylase YP_002549985.1 2277962 D 311402 CDS YP_002549986.1 222149029 7388397 2279501..2280985 1 NC_011989.1 hypothetical protein 2280985 7388397 Avi_2743 Agrobacterium vitis S4 hypothetical protein YP_002549986.1 2279501 D 311402 CDS YP_002549987.1 222149030 7388398 2280978..2283734 1 NC_011989.1 hypothetical protein 2283734 7388398 Avi_2744 Agrobacterium vitis S4 hypothetical protein YP_002549987.1 2280978 D 311402 CDS YP_002549988.1 222149031 7388399 2283731..2284714 1 NC_011989.1 hypothetical protein 2284714 7388399 Avi_2745 Agrobacterium vitis S4 hypothetical protein YP_002549988.1 2283731 D 311402 CDS YP_002549989.1 222149032 7388400 2284711..2286810 1 NC_011989.1 hypothetical protein 2286810 7388400 Avi_2746 Agrobacterium vitis S4 hypothetical protein YP_002549989.1 2284711 D 311402 CDS YP_002549990.1 222149033 7388401 2286807..2287643 1 NC_011989.1 hypothetical protein 2287643 7388401 Avi_2747 Agrobacterium vitis S4 hypothetical protein YP_002549990.1 2286807 D 311402 CDS YP_002549991.1 222149034 7388402 2287616..2290348 1 NC_011989.1 hypothetical protein 2290348 7388402 Avi_2748 Agrobacterium vitis S4 hypothetical protein YP_002549991.1 2287616 D 311402 CDS YP_002549992.1 222149035 7388403 complement(2291198..2293045) 1 NC_011989.1 hypothetical protein 2293045 7388403 Avi_2750 Agrobacterium vitis S4 hypothetical protein YP_002549992.1 2291198 R 311402 CDS YP_002549993.1 222149036 7388404 2293347..2293637 1 NC_011989.1 transposase 2293637 tnp 7388404 tnp Agrobacterium vitis S4 transposase YP_002549993.1 2293347 D 311402 CDS YP_002549994.1 222149037 7388405 2293634..2294494 1 NC_011989.1 transposase 2294494 tnp 7388405 tnp Agrobacterium vitis S4 transposase YP_002549994.1 2293634 D 311402 CDS YP_002549995.1 222149038 7388407 complement(2295920..2296357) 1 NC_011989.1 hypothetical protein 2296357 7388407 Avi_2756 Agrobacterium vitis S4 hypothetical protein YP_002549995.1 2295920 R 311402 CDS YP_002549996.1 222149039 7388408 2296588..2296908 1 NC_011989.1 hypothetical protein 2296908 7388408 Avi_2757 Agrobacterium vitis S4 hypothetical protein YP_002549996.1 2296588 D 311402 CDS YP_002549997.1 222149040 7388409 2297488..2299812 1 NC_011989.1 vgrG protein 2299812 vgrG 7388409 vgrG Agrobacterium vitis S4 vgrG protein YP_002549997.1 2297488 D 311402 CDS YP_002549998.1 222149041 7388410 2299818..2300891 1 NC_011989.1 hypothetical protein 2300891 7388410 Avi_2759 Agrobacterium vitis S4 hypothetical protein YP_002549998.1 2299818 D 311402 CDS YP_002549999.1 222149042 7388411 2300884..2302506 1 NC_011989.1 hypothetical protein 2302506 7388411 Avi_2760 Agrobacterium vitis S4 hypothetical protein YP_002549999.1 2300884 D 311402 CDS YP_002550000.1 222149043 7388412 2303112..2303699 1 NC_011989.1 hypothetical protein 2303699 7388412 Avi_2761 Agrobacterium vitis S4 hypothetical protein YP_002550000.1 2303112 D 311402 CDS YP_002550001.1 222149044 7388413 2303735..2304241 1 NC_011989.1 hypothetical protein 2304241 7388413 Avi_2762 Agrobacterium vitis S4 hypothetical protein YP_002550001.1 2303735 D 311402 CDS YP_002550002.1 222149045 7388414 complement(2304307..2304771) 1 NC_011989.1 hypothetical protein 2304771 7388414 Avi_2763 Agrobacterium vitis S4 hypothetical protein YP_002550002.1 2304307 R 311402 CDS YP_002550003.1 222149046 7388415 complement(2304990..2305652) 1 NC_011989.1 transcription antitermination protein 2305652 7388415 Avi_2764 Agrobacterium vitis S4 transcription antitermination protein YP_002550003.1 2304990 R 311402 CDS YP_002550004.1 222149047 7388416 complement(2305639..2307105) 1 NC_011989.1 hypothetical protein 2307105 7388416 Avi_2765 Agrobacterium vitis S4 hypothetical protein YP_002550004.1 2305639 R 311402 CDS YP_002550005.1 222149048 7388417 2307238..2307813 1 NC_011989.1 transcriptional regulator 2307813 7388417 Avi_2767 Agrobacterium vitis S4 transcriptional regulator YP_002550005.1 2307238 D 311402 CDS YP_002550006.1 222149049 7388418 2308160..2308333 1 NC_011989.1 hypothetical protein 2308333 7388418 Avi_2770 Agrobacterium vitis S4 hypothetical protein YP_002550006.1 2308160 D 311402 CDS YP_002550007.1 222149050 7388419 2308878..2309813 1 NC_011989.1 phage-related integrase 2309813 intD 7388419 intD Agrobacterium vitis S4 phage-related integrase YP_002550007.1 2308878 D 311402 CDS YP_002550008.1 222149051 7387173 complement(2310090..2311007) 1 NC_011989.1 phenazine antibiotic biosynthesis related protein 2311007 7387173 Avi_2772 Agrobacterium vitis S4 phenazine antibiotic biosynthesis related protein YP_002550008.1 2310090 R 311402 CDS YP_002550009.1 222149052 7388421 complement(2311082..2311837) 1 NC_011989.1 hypothetical protein 2311837 7388421 Avi_2774 Agrobacterium vitis S4 hypothetical protein YP_002550009.1 2311082 R 311402 CDS YP_002550010.1 222149053 7388422 complement(2312094..2313770) 1 NC_011989.1 methyl-accepting chemotaxis protein 2313770 mcpA 7388422 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550010.1 2312094 R 311402 CDS YP_002550011.1 222149054 7385917 2314181..2315053 1 NC_011989.1 transcriptional regulator 2315053 7385917 Avi_2776 Agrobacterium vitis S4 transcriptional regulator YP_002550011.1 2314181 D 311402 CDS YP_002550012.1 222149055 7385918 complement(2315403..2316422) 1 NC_011989.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2316422 ilvC 7385918 ilvC Agrobacterium vitis S4 ketol-acid reductoisomerase YP_002550012.1 2315403 R 311402 CDS YP_002550013.1 222149056 7385919 complement(2316480..2317118) 1 NC_011989.1 TetR family transcriptional regulator 2317118 7385919 Avi_2780 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002550013.1 2316480 R 311402 CDS YP_002550014.1 222149057 7385920 complement(2317417..2317926) 1 NC_011989.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 2317926 7385920 Avi_2782 Agrobacterium vitis S4 methionine sulfoxide reductase A YP_002550014.1 2317417 R 311402 CDS YP_002550015.1 222149058 7385921 complement(2318741..2319037) 1 NC_011989.1 hypothetical protein 2319037 7385921 Avi_2784 Agrobacterium vitis S4 hypothetical protein YP_002550015.1 2318741 R 311402 CDS YP_002550016.1 222149059 7385922 complement(2319780..2320244) 1 NC_011989.1 transcriptional regulator AsnC family 2320244 7385922 Avi_2786 Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002550016.1 2319780 R 311402 CDS YP_002550017.1 222149060 7385923 2320419..2321132 1 NC_011989.1 aspartate racemase 2321132 7385923 Avi_2787 Agrobacterium vitis S4 aspartate racemase YP_002550017.1 2320419 D 311402 CDS YP_002550018.1 222149061 7385924 2321203..2321823 1 NC_011989.1 transcriptional regulator 2321823 7385924 Avi_2789 Agrobacterium vitis S4 transcriptional regulator YP_002550018.1 2321203 D 311402 CDS YP_002550019.1 222149062 7385925 2321980..2323200 1 NC_011989.1 MFS permease 2323200 7385925 Avi_2790 Agrobacterium vitis S4 MFS permease YP_002550019.1 2321980 D 311402 CDS YP_002550020.1 222149063 7385926 complement(2323273..2325141) 1 NC_011989.1 methyl-accepting chemotaxis protein 2325141 mcpA 7385926 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550020.1 2323273 R 311402 CDS YP_002550021.1 222149064 7385927 complement(2325506..2325916) 1 NC_011989.1 hypothetical protein 2325916 7385927 Avi_2792 Agrobacterium vitis S4 hypothetical protein YP_002550021.1 2325506 R 311402 CDS YP_002550022.1 222149065 7385928 2326155..2327030 1 NC_011989.1 hypothetical protein 2327030 7385928 Avi_2793 Agrobacterium vitis S4 hypothetical protein YP_002550022.1 2326155 D 311402 CDS YP_002550023.1 222149066 7385929 complement(2327159..2327911) 1 NC_011989.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2327911 pdxJ 7385929 pdxJ Agrobacterium vitis S4 pyridoxine 5'-phosphate synthase YP_002550023.1 2327159 R 311402 CDS YP_002550024.1 222149067 7385930 2328476..2329168 1 NC_011989.1 transcriptional regulator 2329168 7385930 Avi_2795 Agrobacterium vitis S4 transcriptional regulator YP_002550024.1 2328476 D 311402 CDS YP_002550025.1 222149068 7385931 complement(2329200..2330330) 1 NC_011989.1 exodeoxyribonuclease V 2330330 7385931 Avi_2796 Agrobacterium vitis S4 exodeoxyribonuclease V YP_002550025.1 2329200 R 311402 CDS YP_002550026.1 222149069 7385932 complement(2330379..2330972) 1 NC_011989.1 RhtB family transporter 2330972 rhtB 7385932 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002550026.1 2330379 R 311402 CDS YP_002550027.1 222149070 7385933 2331122..2331967 1 NC_011989.1 aldo/keto reductase 2331967 7385933 Avi_2798 Agrobacterium vitis S4 aldo/keto reductase YP_002550027.1 2331122 D 311402 CDS YP_002550028.1 222149071 7385934 complement(2331986..2332300) 1 NC_011989.1 hypothetical protein 2332300 7385934 Avi_2799 Agrobacterium vitis S4 hypothetical protein YP_002550028.1 2331986 R 311402 CDS YP_002550029.1 222149072 7385935 complement(2332502..2333074) 1 NC_011989.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2333074 ilvH 7385935 ilvH Agrobacterium vitis S4 acetolactate synthase 3 regulatory subunit YP_002550029.1 2332502 R 311402 CDS YP_002550030.1 222149073 7385936 complement(2333096..2334853) 1 NC_011989.1 acetolactate synthase 3 catalytic subunit 2334853 ilvI 7385936 ilvI Agrobacterium vitis S4 acetolactate synthase 3 catalytic subunit YP_002550030.1 2333096 R 311402 CDS YP_002550031.1 222149074 7385937 2335231..2337312 1 NC_011989.1 hypothetical protein 2337312 7385937 Avi_2804 Agrobacterium vitis S4 hypothetical protein YP_002550031.1 2335231 D 311402 CDS YP_002550032.1 222149075 7385938 2337316..2338452 1 NC_011989.1 hypothetical protein 2338452 7385938 Avi_2805 Agrobacterium vitis S4 hypothetical protein YP_002550032.1 2337316 D 311402 CDS YP_002550033.1 222149076 7385939 complement(2338843..2339757) 1 NC_011989.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2339757 miaA 7385939 miaA Agrobacterium vitis S4 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002550033.1 2338843 R 311402 CDS YP_002550034.1 222149077 7385940 2339756..2340646 1 NC_011989.1 phosphoserine phosphatase 2340646 serB 7385940 serB Agrobacterium vitis S4 phosphoserine phosphatase YP_002550034.1 2339756 D 311402 CDS YP_002550035.1 222149078 7385941 2340656..2341222 1 NC_011989.1 acetyltransferase 2341222 7385941 Avi_2810 Agrobacterium vitis S4 acetyltransferase YP_002550035.1 2340656 D 311402 CDS YP_002550036.1 222149079 7385942 complement(2341285..2342871) 1 NC_011989.1 serine protease 2342871 htrA 7385942 htrA Agrobacterium vitis S4 serine protease YP_002550036.1 2341285 R 311402 CDS YP_002550037.1 222149080 7385943 complement(2343136..2344053) 1 NC_011989.1 HFLC protein 2344053 hflC 7385943 hflC Agrobacterium vitis S4 HFLC protein YP_002550037.1 2343136 R 311402 CDS YP_002550038.1 222149081 7385944 complement(2344055..2345206) 1 NC_011989.1 HFLK protein 2345206 hflK 7385944 hflK Agrobacterium vitis S4 HFLK protein YP_002550038.1 2344055 R 311402 CDS YP_002550039.1 222149082 7385945 complement(2345416..2345937) 1 NC_011989.1 dihydrofolate reductase 2345937 folA 7385945 folA Agrobacterium vitis S4 dihydrofolate reductase YP_002550039.1 2345416 R 311402 CDS YP_002550040.1 222149083 7385946 complement(2346051..2346443) 1 NC_011989.1 hypothetical protein 2346443 7385946 Avi_2820 Agrobacterium vitis S4 hypothetical protein YP_002550040.1 2346051 R 311402 CDS YP_002550041.1 222149084 7385947 complement(2346679..2347473) 1 NC_011989.1 thymidylate synthase 2347473 thyA 7385947 thyA Agrobacterium vitis S4 thymidylate synthase YP_002550041.1 2346679 R 311402 CDS YP_002550042.1 222149085 7387981 2348274..2348783 1 NC_011989.1 hypothetical protein 2348783 7387981 Avi_2824 Agrobacterium vitis S4 hypothetical protein YP_002550042.1 2348274 D 311402 CDS YP_002550043.1 222149086 7385949 2348810..2349022 1 NC_011989.1 hypothetical protein 2349022 7385949 Avi_2825 Agrobacterium vitis S4 hypothetical protein YP_002550043.1 2348810 D 311402 CDS YP_002550044.1 222149087 7385950 2349130..2349372 1 NC_011989.1 hypothetical protein 2349372 7385950 Avi_2826 Agrobacterium vitis S4 hypothetical protein YP_002550044.1 2349130 D 311402 CDS YP_002550045.1 222149088 7385951 2349705..2349983 1 NC_011989.1 hypothetical protein 2349983 7385951 Avi_2827 Agrobacterium vitis S4 hypothetical protein YP_002550045.1 2349705 D 311402 CDS YP_002550046.1 222149089 7385952 complement(2350112..2353804) 1 NC_011989.1 hypothetical protein 2353804 7385952 Avi_2828 Agrobacterium vitis S4 hypothetical protein YP_002550046.1 2350112 R 311402 CDS YP_002550047.1 222149090 7385953 complement(2353880..2355289) 1 NC_011989.1 FAD dependent oxidoreductase 2355289 7385953 Avi_2829 Agrobacterium vitis S4 FAD dependent oxidoreductase YP_002550047.1 2353880 R 311402 CDS YP_002550048.1 222149091 7385954 complement(2355410..2356246) 1 NC_011989.1 phosphate ABC transporter ATP-binding protein 2356246 pstB 7385954 pstB Agrobacterium vitis S4 phosphate ABC transporter ATP-binding protein YP_002550048.1 2355410 R 311402 CDS YP_002550049.1 222149092 7385955 complement(2356247..2357098) 1 NC_011989.1 phosphate ABC transporter permease 2357098 pstA 7385955 pstA Agrobacterium vitis S4 phosphate ABC transporter permease YP_002550049.1 2356247 R 311402 CDS YP_002550050.1 222149093 7385956 complement(2357108..2358082) 1 NC_011989.1 phosphate ABC transporter permease 2358082 pstC 7385956 pstC Agrobacterium vitis S4 phosphate ABC transporter permease YP_002550050.1 2357108 R 311402 CDS YP_002550051.1 222149094 7385957 complement(2358182..2359231) 1 NC_011989.1 periplasmic phosphate-binding protein (PBP) 2359231 7385957 Avi_2833 Agrobacterium vitis S4 periplasmic phosphate-binding protein (PBP) YP_002550051.1 2358182 R 311402 CDS YP_002550052.1 222149095 7385958 2359507..2362083 1 NC_011989.1 DNA helicase II 2362083 pcrA 7385958 pcrA Agrobacterium vitis S4 DNA helicase II YP_002550052.1 2359507 D 311402 CDS YP_002550053.1 222149096 7385959 2362149..2363147 1 NC_011989.1 hypothetical protein 2363147 7385959 Avi_2837 Agrobacterium vitis S4 hypothetical protein YP_002550053.1 2362149 D 311402 CDS YP_002550054.1 222149097 7385960 2363285..2363551 1 NC_011989.1 Antitoxin of toxin-antitoxin stability system 2363551 7385960 Avi_2838 Agrobacterium vitis S4 Antitoxin of toxin-antitoxin stability system YP_002550054.1 2363285 D 311402 CDS YP_002550055.1 222149098 7385961 2363548..2363970 1 NC_011989.1 nucleic acid-binding protein contains PIN domain 2363970 7385961 Avi_2839 Agrobacterium vitis S4 nucleic acid-binding protein contains PIN domain YP_002550055.1 2363548 D 311402 CDS YP_002550056.1 222149099 7385962 complement(2364705..2367038) 1 NC_011989.1 glucose dehydrogenase 2367038 gcd 7385962 gcd Agrobacterium vitis S4 glucose dehydrogenase YP_002550056.1 2364705 R 311402 CDS YP_002550057.1 222149100 7385963 2367241..2367867 1 NC_011989.1 pyrazinamidase/nicotinamidase 2367867 pncA 7385963 pncA Agrobacterium vitis S4 pyrazinamidase/nicotinamidase YP_002550057.1 2367241 D 311402 CDS YP_002550058.1 222149101 7385964 2367912..2368781 1 NC_011989.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2368781 panC 7385964 panC Agrobacterium vitis S4 pantoate--beta-alanine ligase YP_002550058.1 2367912 D 311402 CDS YP_002550059.1 222149102 7385965 2368778..2369602 1 NC_011989.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2369602 panB 7385965 panB Agrobacterium vitis S4 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002550059.1 2368778 D 311402 CDS YP_002550060.1 222149103 7385966 complement(2369656..2370390) 1 NC_011989.1 hypothetical protein 2370390 7385966 Avi_2848 Agrobacterium vitis S4 hypothetical protein YP_002550060.1 2369656 R 311402 CDS YP_002550061.1 222149104 7385967 complement(2370402..2372009) 1 NC_011989.1 L-aspartate oxidase 2372009 nadB 7385967 nadB Agrobacterium vitis S4 L-aspartate oxidase YP_002550061.1 2370402 R 311402 CDS YP_002550062.1 222149105 7385968 complement(2372227..2372490) 1 NC_011989.1 hypothetical protein 2372490 7385968 Avi_2851 Agrobacterium vitis S4 hypothetical protein YP_002550062.1 2372227 R 311402 CDS YP_002550063.1 222149106 7385969 2372799..2373509 1 NC_011989.1 hypothetical protein 2373509 7385969 Avi_2852 Agrobacterium vitis S4 hypothetical protein YP_002550063.1 2372799 D 311402 CDS YP_002550064.1 222149107 7385970 2373506..2373814 1 NC_011989.1 hypothetical protein 2373814 7385970 Avi_2853 Agrobacterium vitis S4 hypothetical protein YP_002550064.1 2373506 D 311402 CDS YP_002550065.1 222149108 7385971 complement(2374426..2376273) 1 NC_011989.1 aminopeptidase P 2376273 7385971 Avi_2855 Agrobacterium vitis S4 aminopeptidase P YP_002550065.1 2374426 R 311402 CDS YP_002550066.1 222149109 7385972 complement(2377027..2377899) 1 NC_011989.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 2377899 prmA 7385972 prmA Agrobacterium vitis S4 ribosomal protein L11 methyltransferase YP_002550066.1 2377027 R 311402 CDS YP_002550067.1 222149110 7385973 complement(2378019..2378618) 1 NC_011989.1 cytochrome c oxidase assembly factor transmembrane protein 2378618 7385973 Avi_2858 Agrobacterium vitis S4 cytochrome c oxidase assembly factor transmembrane protein YP_002550067.1 2378019 R 311402 CDS YP_002550068.1 222149111 7385974 2379122..2381128 1 NC_011989.1 methyl-accepting chemotaxis protein 2381128 mcpG 7385974 mcpG Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550068.1 2379122 D 311402 CDS YP_002550069.1 222149112 7385975 2381132..2381596 1 NC_011989.1 chemotaxis protein 2381596 cheW 7385975 cheW Agrobacterium vitis S4 chemotaxis protein YP_002550069.1 2381132 D 311402 CDS YP_002550070.1 222149113 7385976 2381908..2382252 1 NC_011989.1 hypothetical protein 2382252 7385976 Avi_2863 Agrobacterium vitis S4 hypothetical protein YP_002550070.1 2381908 D 311402 CDS YP_002550071.1 222149114 7385977 complement(2382787..2383275) 1 NC_011989.1 hypothetical protein 2383275 7385977 Avi_2864 Agrobacterium vitis S4 hypothetical protein YP_002550071.1 2382787 R 311402 CDS YP_002550072.1 222149115 7385978 complement(2383359..2383982) 1 NC_011989.1 DNA polymerase III epsilon subunit-like 3-5 exonuclease 2383982 7385978 Avi_2865 Agrobacterium vitis S4 DNA polymerase III epsilon subunit-like 3-5 exonuclease YP_002550072.1 2383359 R 311402 CDS YP_002550073.1 222149116 7385979 2384035..2384676 1 NC_011989.1 hypothetical protein 2384676 7385979 Avi_2868 Agrobacterium vitis S4 hypothetical protein YP_002550073.1 2384035 D 311402 CDS YP_002550074.1 222149117 7385980 complement(2384732..2386561) 1 NC_011989.1 methyl-accepting chemotaxis protein 2386561 mcpG 7385980 mcpG Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550074.1 2384732 R 311402 CDS YP_002550075.1 222149118 7385981 2387083..2387565 1 NC_011989.1 acetyltransferase 2387565 7385981 Avi_2870 Agrobacterium vitis S4 acetyltransferase YP_002550075.1 2387083 D 311402 CDS YP_002550076.1 222149119 7385982 2387742..2389763 1 NC_011989.1 cold-shock dead-box protein A 2389763 deaD 7385982 deaD Agrobacterium vitis S4 cold-shock dead-box protein A YP_002550076.1 2387742 D 311402 CDS YP_002550077.1 222149120 7385983 2390036..2391976 1 NC_011989.1 amine oxidase flavin-containing 2391976 7385983 Avi_2873 Agrobacterium vitis S4 amine oxidase flavin-containing YP_002550077.1 2390036 D 311402 CDS YP_002550078.1 222149121 7385984 2392121..2393062 1 NC_011989.1 hypothetical protein 2393062 7385984 Avi_2874 Agrobacterium vitis S4 hypothetical protein YP_002550078.1 2392121 D 311402 CDS YP_002550079.1 222149122 7385985 complement(2393235..2393573) 1 NC_011989.1 hypothetical protein 2393573 7385985 Avi_2875 Agrobacterium vitis S4 hypothetical protein YP_002550079.1 2393235 R 311402 CDS YP_002550080.1 222149123 7385986 complement(2393822..2395981) 1 NC_011989.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 2395981 ligA 7385986 ligA Agrobacterium vitis S4 NAD-dependent DNA ligase LigA YP_002550080.1 2393822 R 311402 CDS YP_002550081.1 222149124 7385987 complement(2396043..2396876) 1 NC_011989.1 hypothetical protein 2396876 7385987 Avi_2877 Agrobacterium vitis S4 hypothetical protein YP_002550081.1 2396043 R 311402 CDS YP_002550082.1 222149125 7385988 complement(2396915..2398363) 1 NC_011989.1 cardiolipin synthase 2398363 cls 7385988 cls Agrobacterium vitis S4 cardiolipin synthase YP_002550082.1 2396915 R 311402 CDS YP_002550083.1 222149126 7385989 complement(2398514..2400187) 1 NC_011989.1 DNA repair protein RecN 2400187 recN 7385989 recN Agrobacterium vitis S4 DNA repair protein RecN YP_002550083.1 2398514 R 311402 CDS YP_002550084.1 222149127 7385990 complement(2400234..2401103) 1 NC_011989.1 hypothetical protein 2401103 7385990 Avi_2880 Agrobacterium vitis S4 hypothetical protein YP_002550084.1 2400234 R 311402 CDS YP_002550085.1 222149128 7385991 complement(2401482..2402387) 1 NC_011989.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2402387 lpxC 7385991 lpxC Agrobacterium vitis S4 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_002550085.1 2401482 R 311402 CDS YP_002550086.1 222149129 7385992 complement(2402897..2404756) 1 NC_011989.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2404756 ftsZ2 7385992 ftsZ2 Agrobacterium vitis S4 cell division protein FtsZ YP_002550086.1 2402897 R 311402 CDS YP_002550087.1 222149130 7385993 complement(2404814..2406139) 1 NC_011989.1 cell division protein 2406139 ftsA 7385993 ftsA Agrobacterium vitis S4 cell division protein YP_002550087.1 2404814 R 311402 CDS YP_002550088.1 222149131 7385994 complement(2406136..2407065) 1 NC_011989.1 cell division protein 2407065 ftsQ 7385994 ftsQ Agrobacterium vitis S4 cell division protein YP_002550088.1 2406136 R 311402 CDS YP_002550089.1 222149132 7385995 complement(2407062..2407964) 1 NC_011989.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 2407964 ddl 7385995 ddl Agrobacterium vitis S4 D-alanine--D-alanine ligase YP_002550089.1 2407062 R 311402 CDS YP_002550090.1 222149133 7385996 2409142..2410446 1 NC_011989.1 sugar ABC transporter permease 2410446 7385996 Avi_2888 Agrobacterium vitis S4 sugar ABC transporter permease YP_002550090.1 2409142 D 311402 CDS YP_002550091.1 222149134 7385997 complement(2410563..2411537) 1 NC_011989.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2411537 murB 7385997 murB Agrobacterium vitis S4 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002550091.1 2410563 R 311402 CDS YP_002550092.1 222149135 7385998 complement(2411534..2412949) 1 NC_011989.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2412949 murC 7385998 murC Agrobacterium vitis S4 UDP-N-acetylmuramate--L-alanine ligase YP_002550092.1 2411534 R 311402 CDS YP_002550093.1 222149136 7385999 complement(2412946..2414067) 1 NC_011989.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase 2414067 murG 7385999 murG Agrobacterium vitis S4 UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase YP_002550093.1 2412946 R 311402 CDS YP_002550094.1 222149137 7386000 complement(2414086..2415240) 1 NC_011989.1 cell division protein 2415240 ftsW 7386000 ftsW Agrobacterium vitis S4 cell division protein YP_002550094.1 2414086 R 311402 CDS YP_002550095.1 222149138 7386083 complement(2415242..2416657) 1 NC_011989.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2416657 murD 7386083 murD Agrobacterium vitis S4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_002550095.1 2415242 R 311402 CDS YP_002550096.1 222149139 7386084 complement(2416665..2417765) 1 NC_011989.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2417765 mraY 7386084 mraY Agrobacterium vitis S4 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002550096.1 2416665 R 311402 CDS YP_002550097.1 222149140 7386085 complement(2417818..2419251) 1 NC_011989.1 UDP-MurNAc-pentapeptide synthetase 2419251 murF 7386085 murF Agrobacterium vitis S4 UDP-MurNAc-pentapeptide synthetase YP_002550097.1 2417818 R 311402 CDS YP_002550098.1 222149141 7386086 complement(2419248..2420708) 1 NC_011989.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2420708 murE 7386086 murE Agrobacterium vitis S4 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002550098.1 2419248 R 311402 CDS YP_002550099.1 222149142 7386087 complement(2420773..2422524) 1 NC_011989.1 penicillin binding protein 2 2422524 7386087 Avi_2897 Agrobacterium vitis S4 penicillin binding protein 2 YP_002550099.1 2420773 R 311402 CDS YP_002550100.1 222149143 7386088 complement(2422521..2422940) 1 NC_011989.1 hypothetical protein 2422940 7386088 Avi_2898 Agrobacterium vitis S4 hypothetical protein YP_002550100.1 2422521 R 311402 CDS YP_002550101.1 222149144 7386089 complement(2422944..2423969) 1 NC_011989.1 S-adenosyl-methyltransferase MraW 2423969 mraW 7386089 mraW Agrobacterium vitis S4 S-adenosyl-methyltransferase MraW YP_002550101.1 2422944 R 311402 CDS YP_002550102.1 222149145 7386091 complement(2424086..2424526) 1 NC_011989.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 2424526 7386091 Avi_2899 Agrobacterium vitis S4 cell division protein MraZ YP_002550102.1 2424086 R 311402 CDS YP_002550103.1 222149146 7387982 complement(2425407..2426600) 1 NC_011989.1 sarcosine oxidase 2426600 7387982 Avi_2901 Agrobacterium vitis S4 sarcosine oxidase YP_002550103.1 2425407 R 311402 CDS YP_002550104.1 222149147 7386092 complement(2426763..2427356) 1 NC_011989.1 soluble lytic transglycosylase 2427356 slt 7386092 slt Agrobacterium vitis S4 soluble lytic transglycosylase YP_002550104.1 2426763 R 311402 CDS YP_002550105.1 222149148 7386093 complement(2427652..2428410) 1 NC_011989.1 N-acetylmuramoyl-L-alanine amidase 2428410 7386093 Avi_2906 Agrobacterium vitis S4 N-acetylmuramoyl-L-alanine amidase YP_002550105.1 2427652 R 311402 CDS YP_002550106.1 222149149 7386094 complement(2428407..2429144) 1 NC_011989.1 molecular chaperone DnaJ family 2429144 djlA 7386094 djlA Agrobacterium vitis S4 molecular chaperone DnaJ family YP_002550106.1 2428407 R 311402 CDS YP_002550107.1 222149150 7386095 2429465..2430679 1 NC_011989.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; pyrophosphate--fructose-6-phosphate 1-phosphotransferase 2430679 pfp 7386095 pfp Agrobacterium vitis S4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase YP_002550107.1 2429465 D 311402 CDS YP_002550108.1 222149151 7386096 2430919..2431554 1 NC_011989.1 hypothetical protein 2431554 7386096 Avi_2910 Agrobacterium vitis S4 hypothetical protein YP_002550108.1 2430919 D 311402 CDS YP_002550109.1 222149152 7386097 2431809..2432915 1 NC_011989.1 lytic murein transglycosylase 2432915 7386097 Avi_2912 Agrobacterium vitis S4 lytic murein transglycosylase YP_002550109.1 2431809 D 311402 CDS YP_002550110.1 222149153 7386098 complement(2432970..2434349) 1 NC_011989.1 Hydrolatse transmembrane protein 2434349 7386098 Avi_2913 Agrobacterium vitis S4 Hydrolatse transmembrane protein YP_002550110.1 2432970 R 311402 CDS YP_002550111.1 222149154 7386099 2434642..2435889 1 NC_011989.1 hypothetical protein 2435889 7386099 Avi_2914 Agrobacterium vitis S4 hypothetical protein YP_002550111.1 2434642 D 311402 CDS YP_002550112.1 222149155 7386100 2435952..2436572 1 NC_011989.1 O-methyltransferase 2436572 7386100 Avi_2916 Agrobacterium vitis S4 O-methyltransferase YP_002550112.1 2435952 D 311402 CDS YP_002550113.1 222149156 7386101 2436794..2437597 1 NC_011989.1 glycosyl hydrolase/lysozyme 2437597 lyc 7386101 lyc Agrobacterium vitis S4 glycosyl hydrolase/lysozyme YP_002550113.1 2436794 D 311402 CDS YP_002550114.1 222149157 7386102 2437714..2438904 1 NC_011989.1 lytic murein transglycosylase 2438904 mltB 7386102 mltB Agrobacterium vitis S4 lytic murein transglycosylase YP_002550114.1 2437714 D 311402 CDS YP_002550115.1 222149158 7386103 2439106..2439672 1 NC_011989.1 hydrolase 2439672 7386103 Avi_2922 Agrobacterium vitis S4 hydrolase YP_002550115.1 2439106 D 311402 CDS YP_002550116.1 222149159 7386104 2439678..2440679 1 NC_011989.1 AraC family transcriptional regulator 2440679 7386104 Avi_2923 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002550116.1 2439678 D 311402 CDS YP_002550117.1 222149160 7386105 complement(2441259..2442176) 1 NC_011989.1 methylenetetrahydrofolate reductase 2442176 metF 7386105 metF Agrobacterium vitis S4 methylenetetrahydrofolate reductase YP_002550117.1 2441259 R 311402 CDS YP_002550118.1 222149161 7386106 complement(2442176..2443201) 1 NC_011989.1 transcriptional regulator ArsR family 2443201 7386106 Avi_2926 Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002550118.1 2442176 R 311402 CDS YP_002550119.1 222149162 7386107 complement(2443404..2445596) 1 NC_011989.1 methyl-accepting chemotaxis protein 2445596 mcpC 7386107 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550119.1 2443404 R 311402 CDS YP_002550120.1 222149163 7386108 complement(2445901..2448279) 1 NC_011989.1 methyl-accepting chemotaxis protein 2448279 mcpC 7386108 mcpC Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550120.1 2445901 R 311402 CDS YP_002550121.1 222149164 7386109 complement(2448409..2450058) 1 NC_011989.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 2450058 chvD 7386109 chvD Agrobacterium vitis S4 putative ABC transporter ATP-binding protein YP_002550121.1 2448409 R 311402 CDS YP_002550122.1 222149165 7386110 complement(2450205..2450927) 1 NC_011989.1 Ribonuclease 2450927 7386110 Avi_2930 Agrobacterium vitis S4 Ribonuclease YP_002550122.1 2450205 R 311402 CDS YP_002550123.1 222149166 7386111 2451115..2452065 1 NC_011989.1 hypothetical protein 2452065 7386111 Avi_2931 Agrobacterium vitis S4 hypothetical protein YP_002550123.1 2451115 D 311402 CDS YP_002550124.1 222149167 7386112 2452085..2453113 1 NC_011989.1 permease 2453113 7386112 Avi_2932 Agrobacterium vitis S4 permease YP_002550124.1 2452085 D 311402 CDS YP_002550125.1 222149168 7386113 2453144..2454796 1 NC_011989.1 thiamine pyrophosphate protein 2454796 iivG 7386113 iivG Agrobacterium vitis S4 thiamine pyrophosphate protein YP_002550125.1 2453144 D 311402 CDS YP_002550126.1 222149169 7386114 complement(2454857..2455333) 1 NC_011989.1 Transcriptional regulator protein 2455333 7386114 Avi_2934 Agrobacterium vitis S4 Transcriptional regulator protein YP_002550126.1 2454857 R 311402 CDS YP_002550127.1 222149170 7386115 2455429..2455869 1 NC_011989.1 hypothetical protein 2455869 7386115 Avi_2935 Agrobacterium vitis S4 hypothetical protein YP_002550127.1 2455429 D 311402 CDS YP_002550128.1 222149171 7386116 complement(2455925..2456266) 1 NC_011989.1 hypothetical protein 2456266 7386116 Avi_2936 Agrobacterium vitis S4 hypothetical protein YP_002550128.1 2455925 R 311402 CDS YP_002550129.1 222149172 7386117 complement(2456342..2456677) 1 NC_011989.1 hypothetical protein 2456677 7386117 Avi_2938 Agrobacterium vitis S4 hypothetical protein YP_002550129.1 2456342 R 311402 CDS YP_002550130.1 222149173 7386118 complement(2456781..2457611) 1 NC_011989.1 hypothetical protein 2457611 7386118 Avi_2941 Agrobacterium vitis S4 hypothetical protein YP_002550130.1 2456781 R 311402 CDS YP_002550131.1 222149174 7386119 2458074..2459345 1 NC_011989.1 hypothetical protein 2459345 7386119 Avi_2943 Agrobacterium vitis S4 hypothetical protein YP_002550131.1 2458074 D 311402 CDS YP_002550132.1 222149175 7386120 complement(2459433..2460149) 1 NC_011989.1 ParA chromosome partitioning protein 2460149 7386120 Avi_2944 Agrobacterium vitis S4 ParA chromosome partitioning protein YP_002550132.1 2459433 R 311402 CDS YP_002550133.1 222149176 7386121 complement(2460326..2461471) 1 NC_011989.1 dehydrogenase 2461471 7386121 Avi_2945 Agrobacterium vitis S4 dehydrogenase YP_002550133.1 2460326 R 311402 CDS YP_002550134.1 222149177 7386122 complement(2461788..2463359) 1 NC_011989.1 Amino acid permease 2463359 7386122 Avi_2946 Agrobacterium vitis S4 Amino acid permease YP_002550134.1 2461788 R 311402 CDS YP_002550135.1 222149178 7386123 2464230..2465330 1 NC_011989.1 ABC transporter substrate-binding protein 2465330 7386123 Avi_2948 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002550135.1 2464230 D 311402 CDS YP_002550136.1 222149179 7386124 2465418..2466410 1 NC_011989.1 ABC transporter permease 2466410 7386124 Avi_2949 Agrobacterium vitis S4 ABC transporter permease YP_002550136.1 2465418 D 311402 CDS YP_002550137.1 222149180 7386125 2466407..2467258 1 NC_011989.1 ABC transporter 2467258 7386125 Avi_2950 Agrobacterium vitis S4 ABC transporter YP_002550137.1 2466407 D 311402 CDS YP_002550138.1 222149181 7386126 2467255..2468313 1 NC_011989.1 ABC transporter ATPase 2468313 7386126 Avi_2951 Agrobacterium vitis S4 ABC transporter ATPase YP_002550138.1 2467255 D 311402 CDS YP_002550139.1 222149182 7386127 2468453..2470180 1 NC_011989.1 sensory methylation accepting chemotaxis protein 2470180 7386127 Avi_2952 Agrobacterium vitis S4 sensory methylation accepting chemotaxis protein YP_002550139.1 2468453 D 311402 CDS YP_002550140.1 222149183 7386128 2470335..2471228 1 NC_011989.1 hypothetical protein 2471228 7386128 Avi_2954 Agrobacterium vitis S4 hypothetical protein YP_002550140.1 2470335 D 311402 CDS YP_002550141.1 222149184 7386129 complement(2471231..2472289) 1 NC_011989.1 histidinol-phosphate aminotransferase 2472289 hisC 7386129 hisC Agrobacterium vitis S4 histidinol-phosphate aminotransferase YP_002550141.1 2471231 R 311402 CDS YP_002550142.1 222149185 7386130 2472612..2473343 1 NC_011989.1 transcriptional regulator protein 2473343 7386130 Avi_2957 Agrobacterium vitis S4 transcriptional regulator protein YP_002550142.1 2472612 D 311402 CDS YP_002550143.1 222149186 7386131 2473658..2474062 1 NC_011989.1 transcriptional regulator HTH family 2474062 7386131 Avi_2958 Agrobacterium vitis S4 transcriptional regulator HTH family YP_002550143.1 2473658 D 311402 CDS YP_002550144.1 222149187 7386132 2474403..2475572 1 NC_011989.1 sugar acetylase 2475572 nodX 7386132 nodX Agrobacterium vitis S4 sugar acetylase YP_002550144.1 2474403 D 311402 CDS YP_002550145.1 222149188 7386133 complement(2475617..2476099) 1 NC_011989.1 acetyltransferase 2476099 7386133 Avi_2961 Agrobacterium vitis S4 acetyltransferase YP_002550145.1 2475617 R 311402 CDS YP_002550146.1 222149189 7386134 complement(2476186..2476566) 1 NC_011989.1 transcriptional regulator 2476566 7386134 Avi_2962 Agrobacterium vitis S4 transcriptional regulator YP_002550146.1 2476186 R 311402 CDS YP_002550147.1 222149190 7386135 2476609..2477460 1 NC_011989.1 hypothetical protein 2477460 7386135 Avi_2963 Agrobacterium vitis S4 hypothetical protein YP_002550147.1 2476609 D 311402 CDS YP_002550148.1 222149191 7386136 complement(2477565..2478137) 1 NC_011989.1 hypothetical protein 2478137 7386136 Avi_2964 Agrobacterium vitis S4 hypothetical protein YP_002550148.1 2477565 R 311402 CDS YP_002550149.1 222149192 7386137 complement(2478217..2481990) 1 NC_011989.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 2481990 metH 7386137 metH Agrobacterium vitis S4 B12-dependent methionine synthase YP_002550149.1 2478217 R 311402 CDS YP_002550150.1 222149193 7386138 2482249..2483505 1 NC_011989.1 hypothetical protein 2483505 7386138 Avi_2967 Agrobacterium vitis S4 hypothetical protein YP_002550150.1 2482249 D 311402 CDS YP_002550151.1 222149194 7386139 2483627..2484259 1 NC_011989.1 hypothetical protein 2484259 7386139 Avi_2969 Agrobacterium vitis S4 hypothetical protein YP_002550151.1 2483627 D 311402 CDS YP_002550152.1 222149195 7386140 complement(2484306..2484638) 1 NC_011989.1 hypothetical protein 2484638 7386140 Avi_2970 Agrobacterium vitis S4 hypothetical protein YP_002550152.1 2484306 R 311402 CDS YP_002550153.1 222149196 7386141 complement(2484913..2485734) 1 NC_011989.1 nuclease 2485734 yci 7386141 yci Agrobacterium vitis S4 nuclease YP_002550153.1 2484913 R 311402 CDS YP_002550154.1 222149197 7386142 complement(2485920..2486351) 1 NC_011989.1 copper tolerance protein 2486351 copC 7386142 copC Agrobacterium vitis S4 copper tolerance protein YP_002550154.1 2485920 R 311402 CDS YP_002550155.1 222149198 7386143 complement(2486432..2487835) 1 NC_011989.1 GntR family transcriptional regulator 2487835 7386143 Avi_2977 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002550155.1 2486432 R 311402 CDS YP_002550156.1 222149199 7386144 2487943..2488806 1 NC_011989.1 hypothetical protein 2488806 7386144 Avi_2978 Agrobacterium vitis S4 hypothetical protein YP_002550156.1 2487943 D 311402 CDS YP_002550157.1 222149200 7386145 2489104..2489742 1 NC_011989.1 outer membrane protein 2489742 omp 7386145 omp Agrobacterium vitis S4 outer membrane protein YP_002550157.1 2489104 D 311402 CDS YP_002550158.1 222149201 7386146 complement(2489802..2490548) 1 NC_011989.1 hypothetical conserved membrane protein 2490548 7386146 Avi_2980 Agrobacterium vitis S4 hypothetical conserved membrane protein YP_002550158.1 2489802 R 311402 CDS YP_002550159.1 222149202 7387162 complement(2491006..2491890) 1 NC_011989.1 hypothetical protein 2491890 7387162 Avi_2981 Agrobacterium vitis S4 hypothetical protein YP_002550159.1 2491006 R 311402 CDS YP_002550160.1 222149203 7386148 2492032..2492922 1 NC_011989.1 hypothetical protein 2492922 7386148 Avi_2982 Agrobacterium vitis S4 hypothetical protein YP_002550160.1 2492032 D 311402 CDS YP_002550161.1 222149204 7386149 complement(2493561..2495816) 1 NC_011989.1 hypothetical protein 2495816 7386149 Avi_2983 Agrobacterium vitis S4 hypothetical protein YP_002550161.1 2493561 R 311402 CDS YP_002550162.1 222149205 7386150 complement(2495825..2499160) 1 NC_011989.1 tail fiber protein 2499160 7386150 Avi_2984 Agrobacterium vitis S4 tail fiber protein YP_002550162.1 2495825 R 311402 CDS YP_002550163.1 222149206 7386151 complement(2499157..2499576) 1 NC_011989.1 tail assembly protein 2499576 7386151 Avi_2985 Agrobacterium vitis S4 tail assembly protein YP_002550163.1 2499157 R 311402 CDS YP_002550164.1 222149207 7386152 complement(2500260..2500682) 1 NC_011989.1 hypothetical protein 2500682 7386152 Avi_2988 Agrobacterium vitis S4 hypothetical protein YP_002550164.1 2500260 R 311402 CDS YP_002550165.1 222149208 7386153 complement(2500679..2504485) 1 NC_011989.1 hypothetical protein 2504485 7386153 Avi_2989 Agrobacterium vitis S4 hypothetical protein YP_002550165.1 2500679 R 311402 CDS YP_002550166.1 222149209 7386154 complement(2504482..2504841) 1 NC_011989.1 hypothetical protein 2504841 7386154 Avi_2990 Agrobacterium vitis S4 hypothetical protein YP_002550166.1 2504482 R 311402 CDS YP_002550167.1 222149210 7386155 2505018..2505308 1 NC_011989.1 hypothetical protein 2505308 7386155 Avi_2992 Agrobacterium vitis S4 hypothetical protein YP_002550167.1 2505018 D 311402 CDS YP_002550168.1 222149211 7386156 complement(2505323..2506249) 1 NC_011989.1 hypothetical protein 2506249 7386156 Avi_2995 Agrobacterium vitis S4 hypothetical protein YP_002550168.1 2505323 R 311402 CDS YP_002550169.1 222149212 7386157 complement(2506419..2506835) 1 NC_011989.1 hypothetical protein 2506835 7386157 Avi_2996 Agrobacterium vitis S4 hypothetical protein YP_002550169.1 2506419 R 311402 CDS YP_002550170.1 222149213 7386158 complement(2506832..2507407) 1 NC_011989.1 Mu-like prophage protein 2507407 7386158 Avi_2997 Agrobacterium vitis S4 Mu-like prophage protein YP_002550170.1 2506832 R 311402 CDS YP_002550171.1 222149214 7386159 complement(2507409..2507846) 1 NC_011989.1 hypothetical protein 2507846 7386159 Avi_2998 Agrobacterium vitis S4 hypothetical protein YP_002550171.1 2507409 R 311402 CDS YP_002550172.1 222149215 7386160 complement(2507858..2508199) 1 NC_011989.1 hypothetical protein 2508199 7386160 Avi_3000 Agrobacterium vitis S4 hypothetical protein YP_002550172.1 2507858 R 311402 CDS YP_002550173.1 222149216 7386161 complement(2508307..2509203) 1 NC_011989.1 major head subunit protein 2509203 7386161 Avi_3001 Agrobacterium vitis S4 major head subunit protein YP_002550173.1 2508307 R 311402 CDS YP_002550174.1 222149217 7386162 complement(2509216..2509623) 1 NC_011989.1 hypothetical protein 2509623 7386162 Avi_3002 Agrobacterium vitis S4 hypothetical protein YP_002550174.1 2509216 R 311402 CDS YP_002550175.1 222149218 7386163 complement(2509620..2510591) 1 NC_011989.1 I protein 2510591 7386163 Avi_3003 Agrobacterium vitis S4 I protein YP_002550175.1 2509620 R 311402 CDS YP_002550176.1 222149219 7386164 complement(2511068..2512363) 1 NC_011989.1 prophage MuSo2 F protein 2512363 7386164 Avi_3005 Agrobacterium vitis S4 prophage MuSo2 F protein YP_002550176.1 2511068 R 311402 CDS YP_002550177.1 222149220 7388588 complement(2512360..2513913) 1 NC_011989.1 hypothetical protein 2513913 7388588 Avi_3006 Agrobacterium vitis S4 hypothetical protein YP_002550177.1 2512360 R 311402 CDS YP_002550178.1 222149221 7388589 complement(2513913..2515556) 1 NC_011989.1 hypothetical protein 2515556 7388589 Avi_3008 Agrobacterium vitis S4 hypothetical protein YP_002550178.1 2513913 R 311402 CDS YP_002550179.1 222149222 7388590 complement(2515553..2516137) 1 NC_011989.1 methyl-accepting chemotaxis protein 2516137 7388590 Avi_3009 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550179.1 2515553 R 311402 CDS YP_002550180.1 222149223 7388591 complement(2516140..2516457) 1 NC_011989.1 hypothetical protein 2516457 7388591 Avi_3010 Agrobacterium vitis S4 hypothetical protein YP_002550180.1 2516140 R 311402 CDS YP_002550181.1 222149224 7388592 complement(2516438..2516821) 1 NC_011989.1 ATP-dependent Clp protease ATP-binding subunit 2516821 clpB 7388592 clpB Agrobacterium vitis S4 ATP-dependent Clp protease ATP-binding subunit YP_002550181.1 2516438 R 311402 CDS YP_002550182.1 222149225 7388593 complement(2516818..2517129) 1 NC_011989.1 hypothetical protein 2517129 7388593 Avi_3012 Agrobacterium vitis S4 hypothetical protein YP_002550182.1 2516818 R 311402 CDS YP_002550183.1 222149226 7388594 2517213..2517590 1 NC_011989.1 hypothetical protein 2517590 7388594 Avi_3013 Agrobacterium vitis S4 hypothetical protein YP_002550183.1 2517213 D 311402 CDS YP_002550184.1 222149227 7388595 complement(2518026..2518532) 1 NC_011989.1 Membrane-bound lytic murein transglycosylase B protein 2518532 7388595 Avi_3017 Agrobacterium vitis S4 Membrane-bound lytic murein transglycosylase B protein YP_002550184.1 2518026 R 311402 CDS YP_002550185.1 222149228 7388596 complement(2518634..2518993) 1 NC_011989.1 hypothetical protein 2518993 7388596 Avi_3018 Agrobacterium vitis S4 hypothetical protein YP_002550185.1 2518634 R 311402 CDS YP_002550186.1 222149229 7388597 2519127..2519456 1 NC_011989.1 hypothetical protein 2519456 7388597 Avi_3019 Agrobacterium vitis S4 hypothetical protein YP_002550186.1 2519127 D 311402 CDS YP_002550187.1 222149230 7388598 2519467..2520090 1 NC_011989.1 hypothetical protein 2520090 7388598 Avi_3023 Agrobacterium vitis S4 hypothetical protein YP_002550187.1 2519467 D 311402 CDS YP_002550188.1 222149231 7388599 complement(2520041..2520688) 1 NC_011989.1 hypothetical protein 2520688 7388599 Avi_3025 Agrobacterium vitis S4 hypothetical protein YP_002550188.1 2520041 R 311402 CDS YP_002550189.1 222149232 7388600 complement(2520685..2520975) 1 NC_011989.1 hypothetical protein 2520975 7388600 Avi_3027 Agrobacterium vitis S4 hypothetical protein YP_002550189.1 2520685 R 311402 CDS YP_002550190.1 222149233 7388601 complement(2521932..2522585) 1 NC_011989.1 hypothetical protein 2522585 7388601 Avi_3030 Agrobacterium vitis S4 hypothetical protein YP_002550190.1 2521932 R 311402 CDS YP_002550191.1 222149234 7388602 complement(2523430..2524461) 1 NC_011989.1 hypothetical protein 2524461 7388602 Avi_3033 Agrobacterium vitis S4 hypothetical protein YP_002550191.1 2523430 R 311402 CDS YP_002550192.1 222149235 7388603 complement(2524499..2526571) 1 NC_011989.1 transposase 2526571 7388603 Avi_3035 Agrobacterium vitis S4 transposase YP_002550192.1 2524499 R 311402 CDS YP_002550193.1 222149236 7388604 complement(2526771..2527232) 1 NC_011989.1 hypothetical protein 2527232 7388604 Avi_3037 Agrobacterium vitis S4 hypothetical protein YP_002550193.1 2526771 R 311402 CDS YP_002550194.1 222149237 7388605 complement(2527229..2528056) 1 NC_011989.1 transcriptional regulator protein 2528056 7388605 Avi_3038 Agrobacterium vitis S4 transcriptional regulator protein YP_002550194.1 2527229 R 311402 CDS YP_002550195.1 222149238 7388606 complement(2528315..2528674) 1 NC_011989.1 hypothetical protein 2528674 7388606 Avi_3040 Agrobacterium vitis S4 hypothetical protein YP_002550195.1 2528315 R 311402 CDS YP_002550196.1 222149239 7388607 complement(2528881..2529201) 1 NC_011989.1 hypothetical protein 2529201 7388607 Avi_3041 Agrobacterium vitis S4 hypothetical protein YP_002550196.1 2528881 R 311402 CDS YP_002550197.1 222149240 7388608 2530549..2530770 1 NC_011989.1 phage-related gp54 protein 2530770 7388608 Avi_9915 Agrobacterium vitis S4 phage-related gp54 protein YP_002550197.1 2530549 D 311402 CDS YP_002550198.1 222149241 7387971 2531426..2531923 1 NC_011989.1 hypothetical protein 2531923 7387971 Avi_3042 Agrobacterium vitis S4 hypothetical protein YP_002550198.1 2531426 D 311402 CDS YP_002550199.1 222149242 7388609 2531920..2533056 1 NC_011989.1 hypothetical protein 2533056 7388609 Avi_3043 Agrobacterium vitis S4 hypothetical protein YP_002550199.1 2531920 D 311402 CDS YP_002550200.1 222149243 7388610 2533365..2534882 1 NC_011989.1 IS21 family transposase 2534882 istA 7388610 istA Agrobacterium vitis S4 IS21 family transposase YP_002550200.1 2533365 D 311402 CDS YP_002550201.1 222149244 7388611 2534872..2535666 1 NC_011989.1 IS21 family transposase 2535666 istB 7388611 istB Agrobacterium vitis S4 IS21 family transposase YP_002550201.1 2534872 D 311402 CDS YP_002550202.1 222149245 7388613 complement(2536851..2538404) 1 NC_011989.1 hypothetical protein 2538404 7388613 Avi_3047 Agrobacterium vitis S4 hypothetical protein YP_002550202.1 2536851 R 311402 CDS YP_002550203.1 222149246 7388614 complement(2538404..2539762) 1 NC_011989.1 hypothetical protein 2539762 7388614 Avi_3048 Agrobacterium vitis S4 hypothetical protein YP_002550203.1 2538404 R 311402 CDS YP_002550204.1 222149247 7388615 complement(2539759..2540358) 1 NC_011989.1 hypothetical protein 2540358 7388615 Avi_3049 Agrobacterium vitis S4 hypothetical protein YP_002550204.1 2539759 R 311402 CDS YP_002550205.1 222149248 7388616 complement(2540659..2541042) 1 NC_011989.1 kinesin protein 2541042 7388616 Avi_3052 Agrobacterium vitis S4 kinesin protein YP_002550205.1 2540659 R 311402 CDS YP_002550206.1 222149249 7388617 complement(2541039..2541257) 1 NC_011989.1 DnaK suppressor protein 2541257 7388617 Avi_3053 Agrobacterium vitis S4 DnaK suppressor protein YP_002550206.1 2541039 R 311402 CDS YP_002550207.1 222149250 7388618 complement(2541452..2541805) 1 NC_011989.1 hypothetical protein 2541805 7388618 Avi_3055 Agrobacterium vitis S4 hypothetical protein YP_002550207.1 2541452 R 311402 CDS YP_002550208.1 222149251 7388619 complement(2541802..2542074) 1 NC_011989.1 NAD(P)+ transhydrogenase beta chain 2542074 pntB 7388619 pntB Agrobacterium vitis S4 NAD(P)+ transhydrogenase beta chain YP_002550208.1 2541802 R 311402 CDS YP_002550209.1 222149252 7388620 complement(2542247..2542786) 1 NC_011989.1 Membrane-bound lytic murein transglycosylase B protein 2542786 7388620 Avi_3058 Agrobacterium vitis S4 Membrane-bound lytic murein transglycosylase B protein YP_002550209.1 2542247 R 311402 CDS YP_002550210.1 222149253 7388621 complement(2543206..2543859) 1 NC_011989.1 hypothetical protein 2543859 7388621 Avi_3060 Agrobacterium vitis S4 hypothetical protein YP_002550210.1 2543206 R 311402 CDS YP_002550211.1 222149254 7388622 complement(2544104..2544757) 1 NC_011989.1 hypothetical protein 2544757 7388622 Avi_3062 Agrobacterium vitis S4 hypothetical protein YP_002550211.1 2544104 R 311402 CDS YP_002550212.1 222149255 7388623 2545274..2545495 1 NC_011989.1 hypothetical protein 2545495 7388623 Avi_3065 Agrobacterium vitis S4 hypothetical protein YP_002550212.1 2545274 D 311402 CDS YP_002550213.1 222149256 7388624 complement(2545647..2546690) 1 NC_011989.1 hypothetical protein 2546690 7388624 Avi_3067 Agrobacterium vitis S4 hypothetical protein YP_002550213.1 2545647 R 311402 CDS YP_002550214.1 222149257 7388625 complement(2546728..2548794) 1 NC_011989.1 transposase 2548794 7388625 Avi_3068 Agrobacterium vitis S4 transposase YP_002550214.1 2546728 R 311402 CDS YP_002550215.1 222149258 7388626 complement(2548791..2549255) 1 NC_011989.1 hypothetical protein 2549255 7388626 Avi_3069 Agrobacterium vitis S4 hypothetical protein YP_002550215.1 2548791 R 311402 CDS YP_002550216.1 222149259 7388628 complement(2550108..2550458) 1 NC_011989.1 hypothetical genomic island protein 2550458 7388628 Avi_3073 Agrobacterium vitis S4 hypothetical genomic island protein YP_002550216.1 2550108 R 311402 CDS YP_002550217.1 222149260 7388629 complement(2550909..2551268) 1 NC_011989.1 hypothetical protein 2551268 7388629 Avi_3074 Agrobacterium vitis S4 hypothetical protein YP_002550217.1 2550909 R 311402 CDS YP_002550218.1 222149261 7388630 complement(2551299..2551637) 1 NC_011989.1 hypothetical protein 2551637 7388630 Avi_3075 Agrobacterium vitis S4 hypothetical protein YP_002550218.1 2551299 R 311402 CDS YP_002550219.1 222149262 7388631 2551806..2552465 1 NC_011989.1 transcriptional regulator 2552465 7388631 Avi_3076 Agrobacterium vitis S4 transcriptional regulator YP_002550219.1 2551806 D 311402 CDS YP_002550220.1 222149263 7388632 2552586..2553059 1 NC_011989.1 hypothetical protein 2553059 7388632 Avi_3077 Agrobacterium vitis S4 hypothetical protein YP_002550220.1 2552586 D 311402 CDS YP_002550221.1 222149264 7388633 complement(2553264..2555780) 1 NC_011989.1 heat shock protein 2555780 7388633 Avi_3078 Agrobacterium vitis S4 heat shock protein YP_002550221.1 2553264 R 311402 CDS YP_002550222.1 222149265 7388634 complement(2556154..2558097) 1 NC_011989.1 hypothetical protein 2558097 7388634 Avi_3079 Agrobacterium vitis S4 hypothetical protein YP_002550222.1 2556154 R 311402 CDS YP_002550223.1 222149266 7388635 complement(2559373..2560581) 1 NC_011989.1 hypothetical protein 2560581 7388635 Avi_3084 Agrobacterium vitis S4 hypothetical protein YP_002550223.1 2559373 R 311402 CDS YP_002550224.1 222149267 7388636 complement(2560634..2561389) 1 NC_011989.1 Site-specific DNA methylase 2561389 7388636 Avi_3085 Agrobacterium vitis S4 Site-specific DNA methylase YP_002550224.1 2560634 R 311402 CDS YP_002550225.1 222149268 7388637 complement(2561570..2561773) 1 NC_011989.1 cold shock protein 2561773 cspA 7388637 cspA Agrobacterium vitis S4 cold shock protein YP_002550225.1 2561570 R 311402 CDS YP_002550226.1 222149269 7388638 complement(2562124..2563227) 1 NC_011989.1 UDP-galactopyranose mutase 2563227 glf 7388638 glf Agrobacterium vitis S4 UDP-galactopyranose mutase YP_002550226.1 2562124 R 311402 CDS YP_002550227.1 222149270 7388639 2563810..2565369 1 NC_011989.1 ice nucleation protein 2565369 ina 7388639 ina Agrobacterium vitis S4 ice nucleation protein YP_002550227.1 2563810 D 311402 CDS YP_002550228.1 222149271 7388640 2565675..2567717 1 NC_011989.1 hypothetical protein 2567717 7388640 Avi_3091 Agrobacterium vitis S4 hypothetical protein YP_002550228.1 2565675 D 311402 CDS YP_002550229.1 222149272 7388641 complement(2567867..2569105) 1 NC_011989.1 peptidase 2569105 7388641 Avi_3092 Agrobacterium vitis S4 peptidase YP_002550229.1 2567867 R 311402 CDS YP_002550230.1 222149273 7388642 complement(2569454..2569900) 1 NC_011989.1 hypothetical protein 2569900 7388642 Avi_3093 Agrobacterium vitis S4 hypothetical protein YP_002550230.1 2569454 R 311402 CDS YP_002550231.1 222149274 7388643 complement(2570142..2570522) 1 NC_011989.1 hypothetical protein 2570522 7388643 Avi_3095 Agrobacterium vitis S4 hypothetical protein YP_002550231.1 2570142 R 311402 CDS YP_002550232.1 222149275 7388644 complement(2570619..2572154) 1 NC_011989.1 GGDEF family protein 2572154 7388644 Avi_3097 Agrobacterium vitis S4 GGDEF family protein YP_002550232.1 2570619 R 311402 CDS YP_002550233.1 222149276 7388645 complement(2572154..2572705) 1 NC_011989.1 Guanylate cyclase-related protein 2572705 7388645 Avi_3098 Agrobacterium vitis S4 Guanylate cyclase-related protein YP_002550233.1 2572154 R 311402 CDS YP_002550234.1 222149277 7388646 complement(2572825..2573730) 1 NC_011989.1 LysR family transcriptional regulator 2573730 oriC 7388646 oriC Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550234.1 2572825 R 311402 CDS YP_002550235.1 222149278 7388647 2573817..2574422 1 NC_011989.1 LysE family transporter 2574422 lysE 7388647 lysE Agrobacterium vitis S4 LysE family transporter YP_002550235.1 2573817 D 311402 CDS YP_002550236.1 222149279 7388648 complement(2574426..2575523) 1 NC_011989.1 hypothetical protein 2575523 7388648 Avi_3101 Agrobacterium vitis S4 hypothetical protein YP_002550236.1 2574426 R 311402 CDS YP_002550237.1 222149280 7388649 2575666..2576829 1 NC_011989.1 cellulose synthesis protein 2576829 celE 7388649 celE Agrobacterium vitis S4 cellulose synthesis protein YP_002550237.1 2575666 D 311402 CDS YP_002550238.1 222149281 7388650 2576878..2577855 1 NC_011989.1 hypothetical protein 2577855 7388650 Avi_3103 Agrobacterium vitis S4 hypothetical protein YP_002550238.1 2576878 D 311402 CDS YP_002550239.1 222149282 7388651 complement(2577925..2579970) 1 NC_011989.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 2579970 rpoD 7388651 rpoD Agrobacterium vitis S4 RNA polymerase sigma factor RpoD YP_002550239.1 2577925 R 311402 CDS YP_002550240.1 222149283 7388652 complement(2580657..2582693) 1 NC_011989.1 synthesizes RNA primers at the replication forks; DNA primase 2582693 dnaG 7388652 dnaG Agrobacterium vitis S4 DNA primase YP_002550240.1 2580657 R 311402 CDS YP_002550241.1 222149284 7388653 2582996..2583574 1 NC_011989.1 Na+/H+ antiporter 2583574 mnhA 7388653 mnhA Agrobacterium vitis S4 Na+/H+ antiporter YP_002550241.1 2582996 D 311402 CDS YP_002550242.1 222149285 7388654 2583571..2584557 1 NC_011989.1 biotin synthase 2584557 bioB 7388654 bioB Agrobacterium vitis S4 biotin synthase YP_002550242.1 2583571 D 311402 CDS YP_002550243.1 222149286 7388655 complement(2584650..2585105) 1 NC_011989.1 hypothetical protein 2585105 7388655 Avi_3109 Agrobacterium vitis S4 hypothetical protein YP_002550243.1 2584650 R 311402 CDS YP_002550244.1 222149287 7388656 2585443..2586663 1 NC_011989.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2586663 carA 7388656 carA Agrobacterium vitis S4 carbamoyl phosphate synthase small subunit YP_002550244.1 2585443 D 311402 CDS YP_002550245.1 222149288 7388657 complement(2586760..2588157) 1 NC_011989.1 multidrug efflux protein 2588157 7388657 Avi_3112 Agrobacterium vitis S4 multidrug efflux protein YP_002550245.1 2586760 R 311402 CDS YP_002550246.1 222149289 7388658 complement(2588417..2589319) 1 NC_011989.1 LysR family transcriptional regulator 2589319 7388658 Avi_3113 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550246.1 2588417 R 311402 CDS YP_002550247.1 222149290 7388659 2589423..2590412 1 NC_011989.1 aldo-keto reductase 2590412 7388659 Avi_3114 Agrobacterium vitis S4 aldo-keto reductase YP_002550247.1 2589423 D 311402 CDS YP_002550248.1 222149291 7388660 complement(2590419..2591318) 1 NC_011989.1 hypothetical protein 2591318 7388660 Avi_3115 Agrobacterium vitis S4 hypothetical protein YP_002550248.1 2590419 R 311402 CDS YP_002550249.1 222149292 7388661 complement(2591481..2592164) 1 NC_011989.1 glutathione S-transferase 2592164 7388661 Avi_3116 Agrobacterium vitis S4 glutathione S-transferase YP_002550249.1 2591481 R 311402 CDS YP_002550250.1 222149293 7388662 complement(2592717..2593451) 1 NC_011989.1 hypothetical protein 2593451 7388662 Avi_3120 Agrobacterium vitis S4 hypothetical protein YP_002550250.1 2592717 R 311402 CDS YP_002550251.1 222149294 7388663 2593840..2597214 1 NC_011989.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 2597214 carB 7388663 carB Agrobacterium vitis S4 carbamoyl phosphate synthase large subunit YP_002550251.1 2593840 D 311402 CDS YP_002550252.1 222149295 7388664 2597362..2598648 1 NC_011989.1 hypothetical protein 2598648 7388664 Avi_3124 Agrobacterium vitis S4 hypothetical protein YP_002550252.1 2597362 D 311402 CDS YP_002550253.1 222149296 7388665 2599096..2599572 1 NC_011989.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 2599572 greA 7388665 greA Agrobacterium vitis S4 transcription elongation factor GreA YP_002550253.1 2599096 D 311402 CDS YP_002550254.1 222149297 7388666 2599653..2600756 1 NC_011989.1 lipopolysaccharide core biosynthesis mannosyltransferase 2600756 lpcC 7388666 lpcC Agrobacterium vitis S4 lipopolysaccharide core biosynthesis mannosyltransferase YP_002550254.1 2599653 D 311402 CDS YP_002550255.1 222149298 7388667 2600767..2601594 1 NC_011989.1 glycosyl transferase 2601594 7388667 Avi_3129 Agrobacterium vitis S4 glycosyl transferase YP_002550255.1 2600767 D 311402 CDS YP_002550256.1 222149299 7388668 2601581..2602387 1 NC_011989.1 hypothetical protein 2602387 7388668 Avi_3131 Agrobacterium vitis S4 hypothetical protein YP_002550256.1 2601581 D 311402 CDS YP_002550257.1 222149300 7388669 2602690..2603619 1 NC_011989.1 hypothetical protein 2603619 7388669 Avi_3134 Agrobacterium vitis S4 hypothetical protein YP_002550257.1 2602690 D 311402 CDS YP_002550258.1 222149301 7388670 2603850..2604509 1 NC_011989.1 hypothetical protein 2604509 7388670 Avi_3135 Agrobacterium vitis S4 hypothetical protein YP_002550258.1 2603850 D 311402 CDS YP_002550259.1 222149302 7386494 2604704..2605696 1 NC_011989.1 hypothetical protein 2605696 7386494 Avi_3137 Agrobacterium vitis S4 hypothetical protein YP_002550259.1 2604704 D 311402 CDS YP_002550260.1 222149303 7388092 complement(2605754..2606221) 1 NC_011989.1 transcriptional regulator AsnC family 2606221 lrp 7388092 lrp Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002550260.1 2605754 R 311402 CDS YP_002550261.1 222149304 7388093 2606412..2607428 1 NC_011989.1 thioredoxin-disulfide reductase 2607428 trxB 7388093 trxB Agrobacterium vitis S4 thioredoxin-disulfide reductase YP_002550261.1 2606412 D 311402 CDS YP_002550262.1 222149305 7388094 2607436..2608350 1 NC_011989.1 LysR family transcriptional regulator 2608350 7388094 Avi_3141 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550262.1 2607436 D 311402 CDS YP_002550263.1 222149306 7387985 2608951..2609238 1 NC_011989.1 transcriptional regulator ArsR family 2609238 7387985 Avi_3142 Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002550263.1 2608951 D 311402 CDS YP_002550264.1 222149307 7388096 2609284..2610399 1 NC_011989.1 oxidoreductase 2610399 7388096 Avi_3143 Agrobacterium vitis S4 oxidoreductase YP_002550264.1 2609284 D 311402 CDS YP_002550265.1 222149308 7388097 complement(2610450..2611562) 1 NC_011989.1 hypothetical protein 2611562 7388097 Avi_3144 Agrobacterium vitis S4 hypothetical protein YP_002550265.1 2610450 R 311402 CDS YP_002550266.1 222149309 7388098 2611622..2612524 1 NC_011989.1 LysR family transcriptional regulator 2612524 7388098 Avi_3145 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550266.1 2611622 D 311402 CDS YP_002550267.1 222149310 7388099 complement(2612617..2612880) 1 NC_011989.1 hypothetical protein 2612880 7388099 Avi_3146 Agrobacterium vitis S4 hypothetical protein YP_002550267.1 2612617 R 311402 CDS YP_002550268.1 222149311 7388100 2613239..2614396 1 NC_011989.1 Ca2+/H+ antiporter 2614396 chaA 7388100 chaA Agrobacterium vitis S4 Ca2+/H+ antiporter YP_002550268.1 2613239 D 311402 CDS YP_002550269.1 222149312 7388101 2614595..2615800 1 NC_011989.1 hypothetical protein 2615800 7388101 Avi_3149 Agrobacterium vitis S4 hypothetical protein YP_002550269.1 2614595 D 311402 CDS YP_002550270.1 222149313 7388102 complement(2615881..2617083) 1 NC_011989.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2617083 aatA 7388102 aatA Agrobacterium vitis S4 aspartate aminotransferase YP_002550270.1 2615881 R 311402 CDS YP_002550271.1 222149314 7388103 2617245..2617835 1 NC_011989.1 hypothetical protein 2617835 7388103 Avi_3152 Agrobacterium vitis S4 hypothetical protein YP_002550271.1 2617245 D 311402 CDS YP_002550272.1 222149315 7388104 2618003..2618893 1 NC_011989.1 permease 2618893 7388104 Avi_3154 Agrobacterium vitis S4 permease YP_002550272.1 2618003 D 311402 CDS YP_002550273.1 222149316 7388105 2619353..2619568 1 NC_011989.1 cold shock protein 2619568 cspA 7388105 cspA Agrobacterium vitis S4 cold shock protein YP_002550273.1 2619353 D 311402 CDS YP_002550274.1 222149317 7388106 complement(2619647..2620294) 1 NC_011989.1 hydrolase 2620294 7388106 Avi_3159 Agrobacterium vitis S4 hydrolase YP_002550274.1 2619647 R 311402 CDS YP_002550275.1 222149318 7388107 2621036..2621500 1 NC_011989.1 transcriptional regulator MarR family 2621500 petP 7388107 petP Agrobacterium vitis S4 transcriptional regulator MarR family YP_002550275.1 2621036 D 311402 CDS YP_002550276.1 222149319 7388108 2621506..2622204 1 NC_011989.1 two component response regulator 2622204 petR 7388108 petR Agrobacterium vitis S4 two component response regulator YP_002550276.1 2621506 D 311402 CDS YP_002550277.1 222149320 7388109 2622390..2623712 1 NC_011989.1 two component sensor kinase 2623712 envZ 7388109 envZ Agrobacterium vitis S4 two component sensor kinase YP_002550277.1 2622390 D 311402 CDS YP_002550278.1 222149321 7388110 complement(2623751..2624110) 1 NC_011989.1 secretion chaperone 2624110 csaA 7388110 csaA Agrobacterium vitis S4 secretion chaperone YP_002550278.1 2623751 R 311402 CDS YP_002550279.1 222149322 7388111 complement(2624107..2624928) 1 NC_011989.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 2624928 proC 7388111 proC Agrobacterium vitis S4 pyrroline-5-carboxylate reductase YP_002550279.1 2624107 R 311402 CDS YP_002550280.1 222149323 7388112 complement(2624931..2625431) 1 NC_011989.1 hypothetical protein 2625431 7388112 Avi_3169 Agrobacterium vitis S4 hypothetical protein YP_002550280.1 2624931 R 311402 CDS YP_002550281.1 222149324 7388113 complement(2625916..2626191) 1 NC_011989.1 hypothetical protein 2626191 7388113 Avi_3170 Agrobacterium vitis S4 hypothetical protein YP_002550281.1 2625916 R 311402 CDS YP_002550282.1 222149325 7388114 2626523..2627386 1 NC_011989.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2627386 lgt 7388114 lgt Agrobacterium vitis S4 prolipoprotein diacylglyceryl transferase YP_002550282.1 2626523 D 311402 CDS YP_002550283.1 222149326 7388115 2627383..2628516 1 NC_011989.1 hypothetical protein 2628516 7388115 Avi_3172 Agrobacterium vitis S4 hypothetical protein YP_002550283.1 2627383 D 311402 CDS YP_002550284.1 222149327 7388116 2628678..2629508 1 NC_011989.1 hypothetical protein 2629508 7388116 Avi_3173 Agrobacterium vitis S4 hypothetical protein YP_002550284.1 2628678 D 311402 CDS YP_002550285.1 222149328 7388117 2629505..2630659 1 NC_011989.1 proline dipeptidase 2630659 pepQ 7388117 pepQ Agrobacterium vitis S4 proline dipeptidase YP_002550285.1 2629505 D 311402 CDS YP_002550286.1 222149329 7388118 2630800..2631732 1 NC_011989.1 hypothetical protein 2631732 7388118 Avi_3175 Agrobacterium vitis S4 hypothetical protein YP_002550286.1 2630800 D 311402 CDS YP_002550287.1 222149330 7388119 2632801..2633733 1 NC_011989.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2633733 prsA 7388119 prsA Agrobacterium vitis S4 ribose-phosphate pyrophosphokinase YP_002550287.1 2632801 D 311402 CDS YP_002550288.1 222149331 7388120 2634104..2634937 1 NC_011989.1 hypothetical protein 2634937 7388120 Avi_3178 Agrobacterium vitis S4 hypothetical protein YP_002550288.1 2634104 D 311402 CDS YP_002550289.1 222149332 7388121 complement(2634964..2635341) 1 NC_011989.1 hypothetical protein 2635341 7388121 Avi_3179 Agrobacterium vitis S4 hypothetical protein YP_002550289.1 2634964 R 311402 CDS YP_002550290.1 222149333 7388122 complement(2635624..2637138) 1 NC_011989.1 aldehyde dehydrogenase 2637138 aldA 7388122 aldA Agrobacterium vitis S4 aldehyde dehydrogenase YP_002550290.1 2635624 R 311402 CDS YP_002550291.1 222149334 7388123 complement(2637324..2638280) 1 NC_011989.1 transcriptional regulator 2638280 acoR 7388123 acoR Agrobacterium vitis S4 transcriptional regulator YP_002550291.1 2637324 R 311402 CDS YP_002550292.1 222149335 7388124 2638648..2639250 1 NC_011989.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 2639250 rplY 7388124 rplY Agrobacterium vitis S4 50S ribosomal protein L25 YP_002550292.1 2638648 D 311402 CDS YP_002550293.1 222149336 7388125 2639645..2642047 1 NC_011989.1 GGDEF family protein 2642047 7388125 Avi_3187 Agrobacterium vitis S4 GGDEF family protein YP_002550293.1 2639645 D 311402 CDS YP_002550294.1 222149337 7388126 2642170..2642856 1 NC_011989.1 amino acid ABC transporter substrate-binding protein 2642856 7388126 Avi_3188 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002550294.1 2642170 D 311402 CDS YP_002550295.1 222149338 7388127 2642934..2643638 1 NC_011989.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2643638 pth 7388127 pth Agrobacterium vitis S4 peptidyl-tRNA hydrolase YP_002550295.1 2642934 D 311402 CDS YP_002550296.1 222149339 7388128 2643642..2644205 1 NC_011989.1 hypothetical protein 2644205 7388128 Avi_3191 Agrobacterium vitis S4 hypothetical protein YP_002550296.1 2643642 D 311402 CDS YP_002550297.1 222149340 7388129 2644220..2644669 1 NC_011989.1 acetyltransferase 2644669 7388129 Avi_3192 Agrobacterium vitis S4 acetyltransferase YP_002550297.1 2644220 D 311402 CDS YP_002550298.1 222149341 7388130 complement(2644673..2644984) 1 NC_011989.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor 2644984 clpS 7388130 clpS Agrobacterium vitis S4 ATP-dependent Clp protease adaptor YP_002550298.1 2644673 R 311402 CDS YP_002550299.1 222149342 7388131 2645139..2646242 1 NC_011989.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2646242 7388131 Avi_3194 Agrobacterium vitis S4 GTP-dependent nucleic acid-binding protein EngD YP_002550299.1 2645139 D 311402 CDS YP_002550300.1 222149343 7388132 2646397..2647893 1 NC_011989.1 hypothetical protein 2647893 7388132 Avi_3195 Agrobacterium vitis S4 hypothetical protein YP_002550300.1 2646397 D 311402 CDS YP_002550301.1 222149344 7388133 2647942..2648412 1 NC_011989.1 hypothetical protein 2648412 7388133 Avi_3196 Agrobacterium vitis S4 hypothetical protein YP_002550301.1 2647942 D 311402 CDS YP_002550302.1 222149345 7388134 2648409..2648894 1 NC_011989.1 hypothetical protein 2648894 7388134 Avi_3197 Agrobacterium vitis S4 hypothetical protein YP_002550302.1 2648409 D 311402 CDS YP_002550303.1 222149346 7388135 2648881..2649360 1 NC_011989.1 glutathione peroxidase 2649360 7388135 Avi_3198 Agrobacterium vitis S4 glutathione peroxidase YP_002550303.1 2648881 D 311402 CDS YP_002550304.1 222149347 7388136 complement(2649656..2650561) 1 NC_011989.1 hypothetical protein 2650561 7388136 Avi_3200 Agrobacterium vitis S4 hypothetical protein YP_002550304.1 2649656 R 311402 CDS YP_002550305.1 222149348 7388137 complement(2650593..2651066) 1 NC_011989.1 adenine phosphoribosyltransferase 2651066 apt 7388137 apt Agrobacterium vitis S4 adenine phosphoribosyltransferase YP_002550305.1 2650593 R 311402 CDS YP_002550306.1 222149349 7388138 complement(2651333..2652187) 1 NC_011989.1 cytochrome c1 2652187 fbcC 7388138 fbcC Agrobacterium vitis S4 cytochrome c1 YP_002550306.1 2651333 R 311402 CDS YP_002550307.1 222149350 7388139 complement(2652213..2653481) 1 NC_011989.1 ubiquinol-cytochrome c reductase cytochrome b subunit 2653481 fbcB 7388139 fbcB Agrobacterium vitis S4 ubiquinol-cytochrome c reductase cytochrome b subunit YP_002550307.1 2652213 R 311402 CDS YP_002550308.1 222149351 7388140 complement(2653495..2654148) 1 NC_011989.1 ubiquinol-cytochrome c reductase iron-sulfur subunit 2654148 petA 7388140 petA Agrobacterium vitis S4 ubiquinol-cytochrome c reductase iron-sulfur subunit YP_002550308.1 2653495 R 311402 CDS YP_002550309.1 222149352 7388141 2654780..2655721 1 NC_011989.1 hypothetical protein 2655721 7388141 Avi_3207 Agrobacterium vitis S4 hypothetical protein YP_002550309.1 2654780 D 311402 CDS YP_002550310.1 222149353 7388142 complement(2656145..2658022) 1 NC_011989.1 ABC transporter ATPase 2658022 7388142 Avi_3208 Agrobacterium vitis S4 ABC transporter ATPase YP_002550310.1 2656145 R 311402 CDS YP_002550311.1 222149354 7388143 2658207..2658659 1 NC_011989.1 aminoglycoside N6'-acetyltransferase 2658659 7388143 Avi_3210 Agrobacterium vitis S4 aminoglycoside N6'-acetyltransferase YP_002550311.1 2658207 D 311402 CDS YP_002550312.1 222149355 7388144 complement(2658803..2660662) 1 NC_011989.1 ABC transporter ATPase 2660662 7388144 Avi_3213 Agrobacterium vitis S4 ABC transporter ATPase YP_002550312.1 2658803 R 311402 CDS YP_002550313.1 222149356 7388145 2661130..2661615 1 NC_011989.1 tRNA/rRNA methyltransferase 2661615 7388145 Avi_3216 Agrobacterium vitis S4 tRNA/rRNA methyltransferase YP_002550313.1 2661130 D 311402 CDS YP_002550314.1 222149357 7388146 2661855..2663261 1 NC_011989.1 OmpA family protein 2663261 7388146 Avi_3218 Agrobacterium vitis S4 OmpA family protein YP_002550314.1 2661855 D 311402 CDS YP_002550315.1 222149358 7388147 complement(2663298..2664257) 1 NC_011989.1 flagella associated protein 2664257 flaA 7388147 flaA Agrobacterium vitis S4 flagella associated protein YP_002550315.1 2663298 R 311402 CDS YP_002550316.1 222149359 7388148 complement(2664444..2664722) 1 NC_011989.1 hypothetical protein 2664722 7388148 Avi_3220 Agrobacterium vitis S4 hypothetical protein YP_002550316.1 2664444 R 311402 CDS YP_002550317.1 222149360 7388149 2664895..2665809 1 NC_011989.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2665809 hemF 7388149 hemF Agrobacterium vitis S4 coproporphyrinogen III oxidase YP_002550317.1 2664895 D 311402 CDS YP_002550318.1 222149361 7388150 2665988..2666293 1 NC_011989.1 hypothetical protein 2666293 7388150 Avi_3224 Agrobacterium vitis S4 hypothetical protein YP_002550318.1 2665988 D 311402 CDS YP_002550319.1 222149362 7388151 complement(2666727..2667989) 1 NC_011989.1 poly(A) polymerase 2667989 papS 7388151 papS Agrobacterium vitis S4 poly(A) polymerase YP_002550319.1 2666727 R 311402 CDS YP_002550320.1 222149363 7388152 complement(2667986..2668642) 1 NC_011989.1 NTP pyrophosphohydrolase MutT family 2668642 7388152 Avi_3227 Agrobacterium vitis S4 NTP pyrophosphohydrolase MutT family YP_002550320.1 2667986 R 311402 CDS YP_002550321.1 222149364 7388153 complement(2668639..2669211) 1 NC_011989.1 hypothetical protein 2669211 7388153 Avi_3228 Agrobacterium vitis S4 hypothetical protein YP_002550321.1 2668639 R 311402 CDS YP_002550322.1 222149365 7388154 2669463..2670491 1 NC_011989.1 MoxR family protein 2670491 moxR 7388154 moxR Agrobacterium vitis S4 MoxR family protein YP_002550322.1 2669463 D 311402 CDS YP_002550323.1 222149366 7388155 2670507..2671469 1 NC_011989.1 hypothetical protein 2671469 7388155 Avi_3231 Agrobacterium vitis S4 hypothetical protein YP_002550323.1 2670507 D 311402 CDS YP_002550324.1 222149367 7388156 2671469..2674297 1 NC_011989.1 hypothetical protein 2674297 7388156 Avi_3232 Agrobacterium vitis S4 hypothetical protein YP_002550324.1 2671469 D 311402 CDS YP_002550325.1 222149368 7388157 2674299..2676368 1 NC_011989.1 hypothetical protein 2676368 7388157 Avi_3233 Agrobacterium vitis S4 hypothetical protein YP_002550325.1 2674299 D 311402 CDS YP_002550326.1 222149369 7388158 2676368..2676874 1 NC_011989.1 polyamine ABC transporter permease 2676874 7388158 Avi_3234 Agrobacterium vitis S4 polyamine ABC transporter permease YP_002550326.1 2676368 D 311402 CDS YP_002550327.1 222149370 7388159 2676883..2677311 1 NC_011989.1 acetyltransferase 2677311 7388159 Avi_3235 Agrobacterium vitis S4 acetyltransferase YP_002550327.1 2676883 D 311402 CDS YP_002550328.1 222149371 7388160 2677343..2677759 1 NC_011989.1 acetyltransferase 2677759 7388160 Avi_3236 Agrobacterium vitis S4 acetyltransferase YP_002550328.1 2677343 D 311402 CDS YP_002550329.1 222149372 7388161 2677800..2678633 1 NC_011989.1 metallo-beta-lactamase 2678633 7388161 Avi_3238 Agrobacterium vitis S4 metallo-beta-lactamase YP_002550329.1 2677800 D 311402 CDS YP_002550330.1 222149373 7388162 complement(2678746..2679321) 1 NC_011989.1 acetyltransferase 2679321 7388162 Avi_3239 Agrobacterium vitis S4 acetyltransferase YP_002550330.1 2678746 R 311402 CDS YP_002550331.1 222149374 7388163 2679626..2680594 1 NC_011989.1 hypothetical protein 2680594 7388163 Avi_3241 Agrobacterium vitis S4 hypothetical protein YP_002550331.1 2679626 D 311402 CDS YP_002550332.1 222149375 7388164 complement(2680576..2680974) 1 NC_011989.1 hypothetical protein 2680974 7388164 Avi_3242 Agrobacterium vitis S4 hypothetical protein YP_002550332.1 2680576 R 311402 CDS YP_002550333.1 222149376 7388165 2681119..2682027 1 NC_011989.1 hypothetical protein 2682027 7388165 Avi_3243 Agrobacterium vitis S4 hypothetical protein YP_002550333.1 2681119 D 311402 CDS YP_002550334.1 222149377 7388166 2682260..2682841 1 NC_011989.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2682841 clpP 7388166 clpP Agrobacterium vitis S4 ATP-dependent Clp protease proteolytic subunit YP_002550334.1 2682260 D 311402 CDS YP_002550335.1 222149378 7388167 2683015..2684199 1 NC_011989.1 benzoate transport protein 2684199 7388167 Avi_3247 Agrobacterium vitis S4 benzoate transport protein YP_002550335.1 2683015 D 311402 CDS YP_002550336.1 222149379 7388168 2684548..2686254 1 NC_011989.1 2-isopropylmalate synthase 2686254 leuA 7388168 leuA Agrobacterium vitis S4 2-isopropylmalate synthase YP_002550336.1 2684548 D 311402 CDS YP_002550337.1 222149380 7388169 complement(2686729..2687340) 1 NC_011989.1 hypothetical protein 2687340 7388169 Avi_9916 Agrobacterium vitis S4 hypothetical protein YP_002550337.1 2686729 R 311402 CDS YP_002550338.1 222149381 7387972 complement(2687449..2687910) 1 NC_011989.1 transcriptional regulator AsnC family 2687910 7387972 Avi_3250 Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002550338.1 2687449 R 311402 CDS YP_002550339.1 222149382 7388170 2688003..2689124 1 NC_011989.1 dehydrogenase 2689124 7388170 Avi_3251 Agrobacterium vitis S4 dehydrogenase YP_002550339.1 2688003 D 311402 CDS YP_002550340.1 222149383 7388171 2689239..2689679 1 NC_011989.1 hypothetical protein 2689679 7388171 Avi_3252 Agrobacterium vitis S4 hypothetical protein YP_002550340.1 2689239 D 311402 CDS YP_002550341.1 222149384 7388172 2689885..2692017 1 NC_011989.1 vgrG protein 2692017 vgrG 7388172 vgrG Agrobacterium vitis S4 vgrG protein YP_002550341.1 2689885 D 311402 CDS YP_002550342.1 222149385 7388173 2692028..2692864 1 NC_011989.1 hypothetical protein 2692864 7388173 Avi_3255 Agrobacterium vitis S4 hypothetical protein YP_002550342.1 2692028 D 311402 CDS YP_002550343.1 222149386 7387429 2692871..2693338 1 NC_011989.1 hypothetical protein 2693338 7387429 Avi_3256 Agrobacterium vitis S4 hypothetical protein YP_002550343.1 2692871 D 311402 CDS YP_002550344.1 222149387 7387430 2693463..2693768 1 NC_011989.1 phospholipase 2693768 7387430 Avi_3257 Agrobacterium vitis S4 phospholipase YP_002550344.1 2693463 D 311402 CDS YP_002550345.1 222149388 7387431 2693922..2694692 1 NC_011989.1 hypothetical protein 2694692 7387431 Avi_3258 Agrobacterium vitis S4 hypothetical protein YP_002550345.1 2693922 D 311402 CDS YP_002550346.1 222149389 7387432 2694914..2697103 1 NC_011989.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; anthranilate synthase 2697103 trpEG 7387432 trpEG Agrobacterium vitis S4 anthranilate synthase YP_002550346.1 2694914 D 311402 CDS YP_002550347.1 222149390 7387433 2697100..2697606 1 NC_011989.1 acetyltransferase 2697606 7387433 Avi_3260 Agrobacterium vitis S4 acetyltransferase YP_002550347.1 2697100 D 311402 CDS YP_002550348.1 222149391 7387434 2697806..2698723 1 NC_011989.1 cation efflux system protein 2698723 7387434 Avi_3261 Agrobacterium vitis S4 cation efflux system protein YP_002550348.1 2697806 D 311402 CDS YP_002550349.1 222149392 7387435 2698720..2699184 1 NC_011989.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2699184 7387435 Avi_3262 Agrobacterium vitis S4 7-cyano-7-deazaguanine reductase YP_002550349.1 2698720 D 311402 CDS YP_002550350.1 222149393 7387436 2699311..2699754 1 NC_011989.1 GTP cyclohydrolase I 2699754 7387436 Avi_3264 Agrobacterium vitis S4 GTP cyclohydrolase I YP_002550350.1 2699311 D 311402 CDS YP_002550351.1 222149394 7387437 complement(2700207..2701037) 1 NC_011989.1 hypothetical protein 2701037 7387437 Avi_3266 Agrobacterium vitis S4 hypothetical protein YP_002550351.1 2700207 R 311402 CDS YP_002550352.1 222149395 7387438 complement(2701194..2701772) 1 NC_011989.1 urease accessory protein 2701772 ureJ 7387438 ureJ Agrobacterium vitis S4 urease accessory protein YP_002550352.1 2701194 R 311402 CDS YP_002550353.1 222149396 7387439 2701972..2703423 1 NC_011989.1 hypothetical protein 2703423 7387439 Avi_3269 Agrobacterium vitis S4 hypothetical protein YP_002550353.1 2701972 D 311402 CDS YP_002550354.1 222149397 7387440 2703568..2704527 1 NC_011989.1 hypothetical protein 2704527 7387440 Avi_3270 Agrobacterium vitis S4 hypothetical protein YP_002550354.1 2703568 D 311402 CDS YP_002550355.1 222149398 7387441 complement(2704543..2706729) 1 NC_011989.1 outer membrane heme receptor 2706729 7387441 Avi_3271 Agrobacterium vitis S4 outer membrane heme receptor YP_002550355.1 2704543 R 311402 CDS YP_002550356.1 222149399 7387442 complement(2706953..2708620) 1 NC_011989.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 2708620 7387442 Avi_3272 Agrobacterium vitis S4 formate--tetrahydrofolate ligase YP_002550356.1 2706953 R 311402 CDS YP_002550357.1 222149400 7387443 2709484..2710209 1 NC_011989.1 transcriptional regulator LuxR family 2710209 avxR 7387443 avxR Agrobacterium vitis S4 transcriptional regulator LuxR family YP_002550357.1 2709484 D 311402 CDS YP_002550358.1 222149401 7387444 2710249..2710698 1 NC_011989.1 hypothetical protein 2710698 7387444 Avi_3275 Agrobacterium vitis S4 hypothetical protein YP_002550358.1 2710249 D 311402 CDS YP_002550359.1 222149402 7387445 complement(2710737..2711846) 1 NC_011989.1 hypothetical protein 2711846 7387445 Avi_3276 Agrobacterium vitis S4 hypothetical protein YP_002550359.1 2710737 R 311402 CDS YP_002550360.1 222149403 7387446 complement(2712038..2712616) 1 NC_011989.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2712616 tdk 7387446 tdk Agrobacterium vitis S4 thymidine kinase YP_002550360.1 2712038 R 311402 CDS YP_002550361.1 222149404 7387447 2713065..2714066 1 NC_011989.1 ABC transporter substrate binding protein (proline/glycine betaine) 2714066 7387447 Avi_3281 Agrobacterium vitis S4 ABC transporter substrate binding protein (proline/glycine betaine) YP_002550361.1 2713065 D 311402 CDS YP_002550362.1 222149405 7387448 2714173..2715018 1 NC_011989.1 glycine/betaine ABC transporter permease 2715018 7387448 Avi_3282 Agrobacterium vitis S4 glycine/betaine ABC transporter permease YP_002550362.1 2714173 D 311402 CDS YP_002550363.1 222149406 7387449 2715015..2716058 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (proline/glycine betaine) 2716058 7387449 Avi_3283 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (proline/glycine betaine) YP_002550363.1 2715015 D 311402 CDS YP_002550364.1 222149407 7387450 2716250..2716981 1 NC_011989.1 hypothetical protein 2716981 7387450 Avi_3284 Agrobacterium vitis S4 hypothetical protein YP_002550364.1 2716250 D 311402 CDS YP_002550365.1 222149408 7387451 2717119..2717436 1 NC_011989.1 transcriptional regulator ArsR family 2717436 nolR 7387451 nolR Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002550365.1 2717119 D 311402 CDS YP_002550366.1 222149409 7387452 2718297..2719634 1 NC_011989.1 catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; omega amino acid--pyruvate transaminase 2719634 bioA 7387452 bioA Agrobacterium vitis S4 omega amino acid--pyruvate transaminase YP_002550366.1 2718297 D 311402 CDS YP_002550367.1 222149410 7387455 2720786..2721745 1 NC_011989.1 hypothetical protein 2721745 7387455 Avi_3290 Agrobacterium vitis S4 hypothetical protein YP_002550367.1 2720786 D 311402 CDS YP_002550368.1 222149411 7387456 2722539..2723645 1 NC_011989.1 ABC transporter substrate binding protein (branched chain amino acid) 2723645 braC 7387456 braC Agrobacterium vitis S4 ABC transporter substrate binding protein (branched chain amino acid) YP_002550368.1 2722539 D 311402 CDS YP_002550369.1 222149412 7387457 2723929..2724798 1 NC_011989.1 Aldose 1-epimerase 2724798 7387457 Avi_3295 Agrobacterium vitis S4 Aldose 1-epimerase YP_002550369.1 2723929 D 311402 CDS YP_002550370.1 222149413 7387458 2724795..2725457 1 NC_011989.1 chloramphenicaol phosphotransferase 2725457 7387458 Avi_3296 Agrobacterium vitis S4 chloramphenicaol phosphotransferase YP_002550370.1 2724795 D 311402 CDS YP_002550371.1 222149414 7387459 2725477..2727171 1 NC_011989.1 adenine deaminase 2727171 ade 7387459 ade Agrobacterium vitis S4 adenine deaminase YP_002550371.1 2725477 D 311402 CDS YP_002550372.1 222149415 7387460 2727226..2727489 1 NC_011989.1 hypothetical protein 2727489 7387460 Avi_3298 Agrobacterium vitis S4 hypothetical protein YP_002550372.1 2727226 D 311402 CDS YP_002550373.1 222149416 7387461 2727493..2727759 1 NC_011989.1 addiction module toxin Txe/YoeB family 2727759 7387461 Avi_3299 Agrobacterium vitis S4 addiction module toxin Txe/YoeB family YP_002550373.1 2727493 D 311402 CDS YP_002550374.1 222149417 7387462 complement(2727767..2729434) 1 NC_011989.1 alpha-glucosidase 2729434 aglA 7387462 aglA Agrobacterium vitis S4 alpha-glucosidase YP_002550374.1 2727767 R 311402 CDS YP_002550375.1 222149418 7387463 2729711..2730778 1 NC_011989.1 glycosyltransferase 2730778 7387463 Avi_3301 Agrobacterium vitis S4 glycosyltransferase YP_002550375.1 2729711 D 311402 CDS YP_002550376.1 222149419 7387464 complement(2730798..2732222) 1 NC_011989.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2732222 engA 7387464 engA Agrobacterium vitis S4 GTP-binding protein EngA YP_002550376.1 2730798 R 311402 CDS YP_002550377.1 222149420 7387465 complement(2732375..2733046) 1 NC_011989.1 hypothetical protein 2733046 7387465 Avi_3303 Agrobacterium vitis S4 hypothetical protein YP_002550377.1 2732375 R 311402 CDS YP_002550378.1 222149421 7387466 complement(2733311..2733916) 1 NC_011989.1 hypothetical protein 2733916 7387466 Avi_3305 Agrobacterium vitis S4 hypothetical protein YP_002550378.1 2733311 R 311402 CDS YP_002550379.1 222149422 7387467 2734027..2735136 1 NC_011989.1 hypothetical protein 2735136 7387467 Avi_3306 Agrobacterium vitis S4 hypothetical protein YP_002550379.1 2734027 D 311402 CDS YP_002550380.1 222149423 7387468 complement(2735285..2736535) 1 NC_011989.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; transport protein 2736535 7387468 Avi_3309 Agrobacterium vitis S4 transport protein YP_002550380.1 2735285 R 311402 CDS YP_002550381.1 222149424 7387469 complement(2736705..2737910) 1 NC_011989.1 MFS permease 2737910 7387469 Avi_3310 Agrobacterium vitis S4 MFS permease YP_002550381.1 2736705 R 311402 CDS YP_002550382.1 222149425 7387470 2738055..2738339 1 NC_011989.1 hypothetical protein 2738339 7387470 Avi_3311 Agrobacterium vitis S4 hypothetical protein YP_002550382.1 2738055 D 311402 CDS YP_002550383.1 222149426 7387471 complement(2738388..2739137) 1 NC_011989.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase 2739137 map 7387471 map Agrobacterium vitis S4 methionine aminopeptidase YP_002550383.1 2738388 R 311402 CDS YP_002550384.1 222149427 7387472 complement(2739177..2740235) 1 NC_011989.1 monooxygenase 2740235 7387472 Avi_3314 Agrobacterium vitis S4 monooxygenase YP_002550384.1 2739177 R 311402 CDS YP_002550385.1 222149428 7387473 complement(2740546..2742039) 1 NC_011989.1 glycerol kinase 2742039 glpK 7387473 glpK Agrobacterium vitis S4 glycerol kinase YP_002550385.1 2740546 R 311402 CDS YP_002550386.1 222149429 7387474 2742307..2743077 1 NC_011989.1 d-beta-hydroxybutyrate dehydrogenase 2743077 bdhA 7387474 bdhA Agrobacterium vitis S4 d-beta-hydroxybutyrate dehydrogenase YP_002550386.1 2742307 D 311402 CDS YP_002550387.1 222149430 7387475 2743108..2744580 1 NC_011989.1 xanthine dehydrogenase 2744580 xdhA 7387475 xdhA Agrobacterium vitis S4 xanthine dehydrogenase YP_002550387.1 2743108 D 311402 CDS YP_002550388.1 222149431 7387476 2744833..2747178 1 NC_011989.1 xanthine dehydrogenase molybdopterin binding subunit 2747178 xdhB 7387476 xdhB Agrobacterium vitis S4 xanthine dehydrogenase molybdopterin binding subunit YP_002550388.1 2744833 D 311402 CDS YP_002550389.1 222149432 7387477 2747175..2747978 1 NC_011989.1 xanthine dehydrogenase accessory protein XdhC 2747978 xdhC 7387477 xdhC Agrobacterium vitis S4 xanthine dehydrogenase accessory protein XdhC YP_002550389.1 2747175 D 311402 CDS YP_002550390.1 222149433 7387478 2748043..2749779 1 NC_011989.1 TPR repeat protein 2749779 7387478 Avi_3323 Agrobacterium vitis S4 TPR repeat protein YP_002550390.1 2748043 D 311402 CDS YP_002550391.1 222149434 7387479 2750125..2751042 1 NC_011989.1 LysR family transcriptional regulator 2751042 7387479 Avi_3324 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550391.1 2750125 D 311402 CDS YP_002550392.1 222149435 7387480 2751167..2752399 1 NC_011989.1 hypothetical protein 2752399 7387480 Avi_3325 Agrobacterium vitis S4 hypothetical protein YP_002550392.1 2751167 D 311402 CDS YP_002550393.1 222149436 7387481 2752399..2753706 1 NC_011989.1 Catalyzes the deamination of guanine; guanine deaminase 2753706 guaD 7387481 guaD Agrobacterium vitis S4 guanine deaminase YP_002550393.1 2752399 D 311402 CDS YP_002550394.1 222149437 7387482 2753943..2754854 1 NC_011989.1 ABC transporter substrate-binding protein 2754854 7387482 Avi_3327 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002550394.1 2753943 D 311402 CDS YP_002550395.1 222149438 7387483 2754948..2755766 1 NC_011989.1 ABC transporter ATPase 2755766 7387483 Avi_3328 Agrobacterium vitis S4 ABC transporter ATPase YP_002550395.1 2754948 D 311402 CDS YP_002550396.1 222149439 7387484 2755780..2756667 1 NC_011989.1 ABC transporter permease 2756667 7387484 Avi_3330 Agrobacterium vitis S4 ABC transporter permease YP_002550396.1 2755780 D 311402 CDS YP_002550397.1 222149440 7387485 complement(2756922..2758151) 1 NC_011989.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2758151 argG 7387485 argG Agrobacterium vitis S4 argininosuccinate synthase YP_002550397.1 2756922 R 311402 CDS YP_002550398.1 222149441 7387486 2758278..2758745 1 NC_011989.1 transcriptional regulator AsnC family 2758745 lrp 7387486 lrp Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002550398.1 2758278 D 311402 CDS YP_002550399.1 222149442 7387487 2758851..2759075 1 NC_011989.1 hypothetical protein 2759075 7387487 Avi_3334 Agrobacterium vitis S4 hypothetical protein YP_002550399.1 2758851 D 311402 CDS YP_002550400.1 222149443 7387488 2759072..2759395 1 NC_011989.1 hypothetical protein 2759395 7387488 Avi_3335 Agrobacterium vitis S4 hypothetical protein YP_002550400.1 2759072 D 311402 CDS YP_002550401.1 222149444 7387489 complement(2759432..2760853) 1 NC_011989.1 two component sensor kinase 2760853 tctE 7387489 tctE Agrobacterium vitis S4 two component sensor kinase YP_002550401.1 2759432 R 311402 CDS YP_002550402.1 222149445 7387490 complement(2760869..2761534) 1 NC_011989.1 two component response regulator 2761534 tctD 7387490 tctD Agrobacterium vitis S4 two component response regulator YP_002550402.1 2760869 R 311402 CDS YP_002550403.1 222149446 7387491 complement(2761634..2762380) 1 NC_011989.1 hypothetical protein 2762380 7387491 Avi_3339 Agrobacterium vitis S4 hypothetical protein YP_002550403.1 2761634 R 311402 CDS YP_002550404.1 222149447 7387492 complement(2762384..2762740) 1 NC_011989.1 hydroxyisourate hydrolase 2762740 pucM 7387492 pucM Agrobacterium vitis S4 hydroxyisourate hydrolase YP_002550404.1 2762384 R 311402 CDS YP_002550405.1 222149448 7387493 complement(2762737..2763246) 1 NC_011989.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 2763246 allA 7387493 allA Agrobacterium vitis S4 ureidoglycolate hydrolase YP_002550405.1 2762737 R 311402 CDS YP_002550406.1 222149449 7387494 complement(2763434..2767438) 1 NC_011989.1 peptide synthetase 2767438 7387494 Avi_3342 Agrobacterium vitis S4 peptide synthetase YP_002550406.1 2763434 R 311402 CDS YP_002550407.1 222149450 7387495 complement(2767575..2767811) 1 NC_011989.1 hypothetical protein 2767811 7387495 Avi_3343 Agrobacterium vitis S4 hypothetical protein YP_002550407.1 2767575 R 311402 CDS YP_002550408.1 222149451 7387496 complement(2768631..2769665) 1 NC_011989.1 glutamine synthetase 2769665 glnA 7387496 glnA Agrobacterium vitis S4 glutamine synthetase YP_002550408.1 2768631 R 311402 CDS YP_002550409.1 222149452 7387497 2770014..2770244 1 NC_011989.1 glutamine synthetase 2770244 7387497 Avi_3346 Agrobacterium vitis S4 glutamine synthetase YP_002550409.1 2770014 D 311402 CDS YP_002550410.1 222149453 7387498 complement(2770452..2770961) 1 NC_011989.1 hypothetical protein 2770961 7387498 Avi_3347 Agrobacterium vitis S4 hypothetical protein YP_002550410.1 2770452 R 311402 CDS YP_002550411.1 222149454 7387499 2771186..2772232 1 NC_011989.1 NADP-dependent alcohol dehydrogenase 2772232 adh 7387499 adh Agrobacterium vitis S4 NADP-dependent alcohol dehydrogenase YP_002550411.1 2771186 D 311402 CDS YP_002550412.1 222149455 7387500 complement(2772365..2772889) 1 NC_011989.1 hypothetical protein 2772889 7387500 Avi_3350 Agrobacterium vitis S4 hypothetical protein YP_002550412.1 2772365 R 311402 CDS YP_002550413.1 222149456 7387501 complement(2773073..2773240) 1 NC_011989.1 hypothetical protein 2773240 7387501 Avi_3352 Agrobacterium vitis S4 hypothetical protein YP_002550413.1 2773073 R 311402 CDS YP_002550414.1 222149457 7387502 2773831..2775711 1 NC_011989.1 GGDEF family protein 2775711 7387502 Avi_3353 Agrobacterium vitis S4 GGDEF family protein YP_002550414.1 2773831 D 311402 CDS YP_002550415.1 222149458 7387503 complement(2775817..2776737) 1 NC_011989.1 hypothetical protein 2776737 7387503 Avi_3355 Agrobacterium vitis S4 hypothetical protein YP_002550415.1 2775817 R 311402 CDS YP_002550416.1 222149459 7387504 complement(2776819..2777526) 1 NC_011989.1 hypothetical protein 2777526 7387504 Avi_3356 Agrobacterium vitis S4 hypothetical protein YP_002550416.1 2776819 R 311402 CDS YP_002550417.1 222149460 7387505 complement(2777928..2779181) 1 NC_011989.1 oxidoreductase 2779181 7387505 Avi_3358 Agrobacterium vitis S4 oxidoreductase YP_002550417.1 2777928 R 311402 CDS YP_002550418.1 222149461 7387506 2779264..2779923 1 NC_011989.1 hypothetical protein 2779923 7387506 Avi_3359 Agrobacterium vitis S4 hypothetical protein YP_002550418.1 2779264 D 311402 CDS YP_002550419.1 222149462 7387507 complement(2779962..2783810) 1 NC_011989.1 two component sensor kinase/response regulator hybrid 2783810 7387507 Avi_3360 Agrobacterium vitis S4 two component sensor kinase/response regulator hybrid YP_002550419.1 2779962 R 311402 CDS YP_002550420.1 222149463 7387508 2784185..2784508 1 NC_011989.1 hypothetical protein 2784508 7387508 Avi_3361 Agrobacterium vitis S4 hypothetical protein YP_002550420.1 2784185 D 311402 CDS YP_002550421.1 222149464 7387509 2784817..2786271 1 NC_011989.1 ATP-dependent RNA helicase 2786271 rhlE 7387509 rhlE Agrobacterium vitis S4 ATP-dependent RNA helicase YP_002550421.1 2784817 D 311402 CDS YP_002550422.1 222149465 7387510 complement(2786442..2788658) 1 NC_011989.1 hypothetical protein 2788658 7387510 Avi_3364 Agrobacterium vitis S4 hypothetical protein YP_002550422.1 2786442 R 311402 CDS YP_002550423.1 222149466 7386995 complement(2788821..2789996) 1 NC_011989.1 Glycine/serine hydroxymethyltransferase 2789996 7386995 Avi_3366 Agrobacterium vitis S4 Glycine/serine hydroxymethyltransferase YP_002550423.1 2788821 R 311402 CDS YP_002550424.1 222149467 7386996 complement(2790469..2790804) 1 NC_011989.1 hypothetical protein 2790804 7386996 Avi_3369 Agrobacterium vitis S4 hypothetical protein YP_002550424.1 2790469 R 311402 CDS YP_002550425.1 222149468 7386997 2790949..2791548 1 NC_011989.1 NAD(P)H-flavin oxidoreductase 2791548 7386997 Avi_3370 Agrobacterium vitis S4 NAD(P)H-flavin oxidoreductase YP_002550425.1 2790949 D 311402 CDS YP_002550426.1 222149469 7386998 2791568..2791969 1 NC_011989.1 hypothetical protein 2791969 7386998 Avi_3371 Agrobacterium vitis S4 hypothetical protein YP_002550426.1 2791568 D 311402 CDS YP_002550427.1 222149470 7386999 2792636..2793793 1 NC_011989.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2793793 dinP 7386999 dinP Agrobacterium vitis S4 DNA polymerase IV YP_002550427.1 2792636 D 311402 CDS YP_002550428.1 222149471 7387000 complement(2794154..2794300) 1 NC_011989.1 hypothetical protein 2794300 7387000 Avi_3375 Agrobacterium vitis S4 hypothetical protein YP_002550428.1 2794154 R 311402 CDS YP_002550429.1 222149472 7387001 complement(2794472..2795452) 1 NC_011989.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 2795452 7387001 Avi_3376 Agrobacterium vitis S4 DNA polymerase III subunit epsilon YP_002550429.1 2794472 R 311402 CDS YP_002550430.1 222149473 7387002 2795811..2798168 1 NC_011989.1 ornithine decarboxylase 2798168 7387002 Avi_3377 Agrobacterium vitis S4 ornithine decarboxylase YP_002550430.1 2795811 D 311402 CDS YP_002550431.1 222149474 7387003 2798209..2798751 1 NC_011989.1 acetyltransferase 2798751 7387003 Avi_3378 Agrobacterium vitis S4 acetyltransferase YP_002550431.1 2798209 D 311402 CDS YP_002550432.1 222149475 7387004 complement(2799056..2799289) 1 NC_011989.1 hypothetical protein 2799289 7387004 Avi_3380 Agrobacterium vitis S4 hypothetical protein YP_002550432.1 2799056 R 311402 CDS YP_002550433.1 222149476 7387005 complement(2799426..2800466) 1 NC_011989.1 hypothetical protein 2800466 7387005 Avi_3381 Agrobacterium vitis S4 hypothetical protein YP_002550433.1 2799426 R 311402 CDS YP_002550434.1 222149477 7387006 complement(2800542..2801516) 1 NC_011989.1 hypothetical protein 2801516 7387006 Avi_3382 Agrobacterium vitis S4 hypothetical protein YP_002550434.1 2800542 R 311402 CDS YP_002550435.1 222149478 7387007 complement(2801580..2802587) 1 NC_011989.1 hypothetical protein 2802587 7387007 Avi_3383 Agrobacterium vitis S4 hypothetical protein YP_002550435.1 2801580 R 311402 CDS YP_002550436.1 222149479 7387008 complement(2802599..2803573) 1 NC_011989.1 hypothetical protein 2803573 7387008 Avi_3385 Agrobacterium vitis S4 hypothetical protein YP_002550436.1 2802599 R 311402 CDS YP_002550437.1 222149480 7387009 complement(2803578..2804633) 1 NC_011989.1 beta-ketoacyl synthase domain-containing protein 2804633 7387009 Avi_3386 Agrobacterium vitis S4 beta-ketoacyl synthase domain-containing protein YP_002550437.1 2803578 R 311402 CDS YP_002550438.1 222149481 7387010 complement(2804630..2805646) 1 NC_011989.1 hypothetical protein 2805646 7387010 Avi_3387 Agrobacterium vitis S4 hypothetical protein YP_002550438.1 2804630 R 311402 CDS YP_002550439.1 222149482 7387011 complement(2805657..2805965) 1 NC_011989.1 hypothetical protein 2805965 7387011 Avi_3388 Agrobacterium vitis S4 hypothetical protein YP_002550439.1 2805657 R 311402 CDS YP_002550440.1 222149483 7387012 complement(2806093..2807364) 1 NC_011989.1 hypothetical protein 2807364 7387012 Avi_3389 Agrobacterium vitis S4 hypothetical protein YP_002550440.1 2806093 R 311402 CDS YP_002550441.1 222149484 7387989 complement(2808108..2808746) 1 NC_011989.1 hypothetical protein 2808746 7387989 Avi_3390 Agrobacterium vitis S4 hypothetical protein YP_002550441.1 2808108 R 311402 CDS YP_002550442.1 222149485 7387014 complement(2808748..2810013) 1 NC_011989.1 phage prohead protease HK97 family 2810013 7387014 Avi_3391 Agrobacterium vitis S4 phage prohead protease HK97 family YP_002550442.1 2808748 R 311402 CDS YP_002550443.1 222149486 7387015 complement(2810028..2812115) 1 NC_011989.1 vgrG protein 2812115 vgrG 7387015 vgrG Agrobacterium vitis S4 vgrG protein YP_002550443.1 2810028 R 311402 CDS YP_002550444.1 222149487 7387016 2812606..2813421 1 NC_011989.1 divalent cation transporter 2813421 7387016 Avi_3394 Agrobacterium vitis S4 divalent cation transporter YP_002550444.1 2812606 D 311402 CDS YP_002550445.1 222149488 7387017 complement(2813803..2814414) 1 NC_011989.1 hypothetical protein 2814414 7387017 Avi_3398 Agrobacterium vitis S4 hypothetical protein YP_002550445.1 2813803 R 311402 CDS YP_002550446.1 222149489 7387018 complement(2814590..2815048) 1 NC_011989.1 hypothetical protein 2815048 7387018 Avi_3401 Agrobacterium vitis S4 hypothetical protein YP_002550446.1 2814590 R 311402 CDS YP_002550447.1 222149490 7387019 complement(2815499..2816293) 1 NC_011989.1 IS21 family transposase 2816293 istB 7387019 istB Agrobacterium vitis S4 IS21 family transposase YP_002550447.1 2815499 R 311402 CDS YP_002550448.1 222149491 7387020 complement(2816283..2817800) 1 NC_011989.1 IS21 family transposase 2817800 istA 7387020 istA Agrobacterium vitis S4 IS21 family transposase YP_002550448.1 2816283 R 311402 CDS YP_002550449.1 222149492 7387021 complement(2817856..2818008) 1 NC_011989.1 hypothetical protein 2818008 7387021 Avi_9917 Agrobacterium vitis S4 hypothetical protein YP_002550449.1 2817856 R 311402 CDS YP_002550450.1 222149493 7387973 2818905..2820044 1 NC_011989.1 hypothetical protein 2820044 7387973 Avi_3404 Agrobacterium vitis S4 hypothetical protein YP_002550450.1 2818905 D 311402 CDS YP_002550451.1 222149494 7387022 2820659..2820892 1 NC_011989.1 hypothetical protein 2820892 7387022 Avi_3406 Agrobacterium vitis S4 hypothetical protein YP_002550451.1 2820659 D 311402 CDS YP_002550452.1 222149495 7387023 complement(2820873..2822531) 1 NC_011989.1 transposase 2822531 7387023 Avi_3407 Agrobacterium vitis S4 transposase YP_002550452.1 2820873 R 311402 CDS YP_002550453.1 222149496 7387024 complement(2822577..2822930) 1 NC_011989.1 IS66 family transposase 2822930 7387024 Avi_3408 Agrobacterium vitis S4 IS66 family transposase YP_002550453.1 2822577 R 311402 CDS YP_002550454.1 222149497 7387025 complement(2822927..2823379) 1 NC_011989.1 hypothetical protein 2823379 7387025 Avi_3409 Agrobacterium vitis S4 hypothetical protein YP_002550454.1 2822927 R 311402 CDS YP_002550455.1 222149498 7387026 2823477..2824499 1 NC_011989.1 hypothetical protein 2824499 7387026 Avi_3410 Agrobacterium vitis S4 hypothetical protein YP_002550455.1 2823477 D 311402 CDS YP_002550456.1 222149499 7387027 2825054..2826250 1 NC_011989.1 gamma butyrobetaine hydroxylase 2826250 7387027 Avi_3411 Agrobacterium vitis S4 gamma butyrobetaine hydroxylase YP_002550456.1 2825054 D 311402 CDS YP_002550457.1 222149500 7387028 2826262..2827248 1 NC_011989.1 PEP phosphonomutase 2827248 7387028 Avi_3412 Agrobacterium vitis S4 PEP phosphonomutase YP_002550457.1 2826262 D 311402 CDS YP_002550458.1 222149501 7387029 2827256..2828398 1 NC_011989.1 phosphonopyruvate decarboxylase 2828398 7387029 Avi_3414 Agrobacterium vitis S4 phosphonopyruvate decarboxylase YP_002550458.1 2827256 D 311402 CDS YP_002550459.1 222149502 7387030 complement(2828432..2829349) 1 NC_011989.1 LysR family transcriptional regulator 2829349 7387030 Avi_3415 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550459.1 2828432 R 311402 CDS YP_002550460.1 222149503 7387031 complement(2829426..2830256) 1 NC_011989.1 hypothetical protein 2830256 7387031 Avi_3416 Agrobacterium vitis S4 hypothetical protein YP_002550460.1 2829426 R 311402 CDS YP_002550461.1 222149504 7387032 complement(2830253..2830834) 1 NC_011989.1 transcriptional regulator protein 2830834 7387032 Avi_3418 Agrobacterium vitis S4 transcriptional regulator protein YP_002550461.1 2830253 R 311402 CDS YP_002550462.1 222149505 7387033 complement(2831462..2831623) 1 NC_011989.1 hypothetical protein 2831623 7387033 Avi_3419 Agrobacterium vitis S4 hypothetical protein YP_002550462.1 2831462 R 311402 CDS YP_002550463.1 222149506 7387034 complement(2832165..2832827) 1 NC_011989.1 transcription antitermination protein 2832827 7387034 Avi_3420 Agrobacterium vitis S4 transcription antitermination protein YP_002550463.1 2832165 R 311402 CDS YP_002550464.1 222149507 7387035 complement(2832814..2834268) 1 NC_011989.1 hypothetical protein 2834268 7387035 Avi_3421 Agrobacterium vitis S4 hypothetical protein YP_002550464.1 2832814 R 311402 CDS YP_002550465.1 222149508 7387036 2834533..2835108 1 NC_011989.1 bacteriophage repressor protein C1 2835108 7387036 Avi_3423 Agrobacterium vitis S4 bacteriophage repressor protein C1 YP_002550465.1 2834533 D 311402 CDS YP_002550466.1 222149509 7387037 complement(2836063..2837385) 1 NC_011989.1 phage integrase 2837385 7387037 Avi_3428 Agrobacterium vitis S4 phage integrase YP_002550466.1 2836063 R 311402 CDS YP_002550467.1 222149510 7387172 2837898..2838371 1 NC_011989.1 transcriptional regulator MarR family 2838371 7387172 Avi_3429 Agrobacterium vitis S4 transcriptional regulator MarR family YP_002550467.1 2837898 D 311402 CDS YP_002550468.1 222149511 7387039 complement(2838543..2839010) 1 NC_011989.1 hypothetical protein 2839010 7387039 Avi_3431 Agrobacterium vitis S4 hypothetical protein YP_002550468.1 2838543 R 311402 CDS YP_002550469.1 222149512 7387040 complement(2839101..2840063) 1 NC_011989.1 quinone oxidoreductase 2840063 qor 7387040 qor Agrobacterium vitis S4 quinone oxidoreductase YP_002550469.1 2839101 R 311402 CDS YP_002550470.1 222149513 7387041 2840228..2841121 1 NC_011989.1 LysR family transcriptional regulator 2841121 7387041 Avi_3433 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550470.1 2840228 D 311402 CDS YP_002550471.1 222149514 7387042 complement(2841244..2842068) 1 NC_011989.1 hypothetical protein 2842068 7387042 Avi_3435 Agrobacterium vitis S4 hypothetical protein YP_002550471.1 2841244 R 311402 CDS YP_002550472.1 222149515 7387043 complement(2842083..2843048) 1 NC_011989.1 hypothetical protein 2843048 7387043 Avi_3436 Agrobacterium vitis S4 hypothetical protein YP_002550472.1 2842083 R 311402 CDS YP_002550473.1 222149516 7387044 complement(2843030..2844424) 1 NC_011989.1 hypothetical protein 2844424 7387044 Avi_3437 Agrobacterium vitis S4 hypothetical protein YP_002550473.1 2843030 R 311402 CDS YP_002550474.1 222149517 7387045 2845122..2846096 1 NC_011989.1 hypothetical protein 2846096 7387045 Avi_3439 Agrobacterium vitis S4 hypothetical protein YP_002550474.1 2845122 D 311402 CDS YP_002550475.1 222149518 7387046 complement(2846175..2846741) 1 NC_011989.1 invertase/recombinase 2846741 7387046 Avi_3440 Agrobacterium vitis S4 invertase/recombinase YP_002550475.1 2846175 R 311402 CDS YP_002550476.1 222149519 7387047 complement(2846997..2847503) 1 NC_011989.1 hypothetical protein 2847503 7387047 Avi_3442 Agrobacterium vitis S4 hypothetical protein YP_002550476.1 2846997 R 311402 CDS YP_002550477.1 222149520 7387048 2847919..2848161 1 NC_011989.1 hypothetical protein 2848161 7387048 Avi_3443 Agrobacterium vitis S4 hypothetical protein YP_002550477.1 2847919 D 311402 CDS YP_002550478.1 222149521 7387049 2848556..2848948 1 NC_011989.1 hypothetical protein 2848948 7387049 Avi_3444 Agrobacterium vitis S4 hypothetical protein YP_002550478.1 2848556 D 311402 CDS YP_002550479.1 222149522 7387050 2848953..2849318 1 NC_011989.1 hypothetical protein 2849318 7387050 Avi_3445 Agrobacterium vitis S4 hypothetical protein YP_002550479.1 2848953 D 311402 CDS YP_002550480.1 222149523 7387051 complement(2849609..2850013) 1 NC_011989.1 hypothetical protein 2850013 7387051 Avi_3447 Agrobacterium vitis S4 hypothetical protein YP_002550480.1 2849609 R 311402 CDS YP_002550481.1 222149524 7387052 2850237..2851664 1 NC_011989.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase 2851664 7387052 Avi_3448 Agrobacterium vitis S4 putative oxidoreductase YP_002550481.1 2850237 D 311402 CDS YP_002550482.1 222149525 7387053 2851682..2852995 1 NC_011989.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 2852995 7387053 Avi_3449 Agrobacterium vitis S4 dihydropyrimidine dehydrogenase YP_002550482.1 2851682 D 311402 CDS YP_002550483.1 222149526 7387054 2853956..2856685 1 NC_011989.1 GGDEF family protein 2856685 7387054 Avi_3451 Agrobacterium vitis S4 GGDEF family protein YP_002550483.1 2853956 D 311402 CDS YP_002550484.1 222149527 7387055 2856810..2857763 1 NC_011989.1 membrane protein 2857763 7387055 Avi_3452 Agrobacterium vitis S4 membrane protein YP_002550484.1 2856810 D 311402 CDS YP_002550485.1 222149528 7387056 complement(2857778..2858419) 1 NC_011989.1 TetR family transcriptional regulator 2858419 7387056 Avi_3453 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002550485.1 2857778 R 311402 CDS YP_002550486.1 222149529 7387057 2858743..2859972 1 NC_011989.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2859972 amaB 7387057 amaB Agrobacterium vitis S4 allantoate amidohydrolase YP_002550486.1 2858743 D 311402 CDS YP_002550487.1 222149530 7387058 2860041..2860568 1 NC_011989.1 hypothetical protein 2860568 7387058 Avi_3456 Agrobacterium vitis S4 hypothetical protein YP_002550487.1 2860041 D 311402 CDS YP_002550488.1 222149531 7387059 2860788..2862242 1 NC_011989.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 2862242 dht 7387059 dht Agrobacterium vitis S4 phenylhydantoinase YP_002550488.1 2860788 D 311402 CDS YP_002550489.1 222149532 7387060 2862783..2863574 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (nitrate) 2863574 7387060 Avi_3458 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (nitrate) YP_002550489.1 2862783 D 311402 CDS YP_002550490.1 222149533 7387061 2863564..2864430 1 NC_011989.1 ABC transporter 2864430 7387061 Avi_3459 Agrobacterium vitis S4 ABC transporter YP_002550490.1 2863564 D 311402 CDS YP_002550491.1 222149534 7387062 2864427..2865293 1 NC_011989.1 ABC transporter permease 2865293 7387062 Avi_3460 Agrobacterium vitis S4 ABC transporter permease YP_002550491.1 2864427 D 311402 CDS YP_002550492.1 222149535 7387063 2865326..2866318 1 NC_011989.1 ABC transporter substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) 2866318 7387063 Avi_3461 Agrobacterium vitis S4 ABC transporter substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) YP_002550492.1 2865326 D 311402 CDS YP_002550493.1 222149536 7387064 2866966..2868102 1 NC_011989.1 HlyD family secretion protein 2868102 7387064 Avi_3463 Agrobacterium vitis S4 HlyD family secretion protein YP_002550493.1 2866966 D 311402 CDS YP_002550494.1 222149537 7387065 2868115..2871420 1 NC_011989.1 Acr family transporter 2871420 7387065 Avi_3464 Agrobacterium vitis S4 Acr family transporter YP_002550494.1 2868115 D 311402 CDS YP_002550495.1 222149538 7387066 2871771..2872478 1 NC_011989.1 regulator of Biofilm formation Fnr Family 2872478 7387066 Avi_3466 Agrobacterium vitis S4 regulator of Biofilm formation Fnr Family YP_002550495.1 2871771 D 311402 CDS YP_002550496.1 222149539 7387067 complement(2872650..2873468) 1 NC_011989.1 metal dependent hydrolase 2873468 7387067 Avi_3467 Agrobacterium vitis S4 metal dependent hydrolase YP_002550496.1 2872650 R 311402 CDS YP_002550497.1 222149540 7387068 complement(2873470..2874081) 1 NC_011989.1 urease accessory protein UreG 2874081 ureG 7387068 ureG Agrobacterium vitis S4 urease accessory protein UreG YP_002550497.1 2873470 R 311402 CDS YP_002550498.1 222149541 7387069 complement(2874136..2874828) 1 NC_011989.1 urease accessory protein 2874828 ureF 7387069 ureF Agrobacterium vitis S4 urease accessory protein YP_002550498.1 2874136 R 311402 CDS YP_002550499.1 222149542 7387070 complement(2874835..2875392) 1 NC_011989.1 urease accessory protein 2875392 ureE 7387070 ureE Agrobacterium vitis S4 urease accessory protein YP_002550499.1 2874835 R 311402 CDS YP_002550500.1 222149543 7387071 complement(2875494..2876222) 1 NC_011989.1 GGDEF family protein 2876222 7387071 Avi_3471 Agrobacterium vitis S4 GGDEF family protein YP_002550500.1 2875494 R 311402 CDS YP_002550501.1 222149544 7387072 complement(2876651..2877190) 1 NC_011989.1 hypothetical protein 2877190 7387072 Avi_3473 Agrobacterium vitis S4 hypothetical protein YP_002550501.1 2876651 R 311402 CDS YP_002550502.1 222149545 7387073 2877785..2879068 1 NC_011989.1 glycosyltransferase 2879068 7387073 Avi_3475 Agrobacterium vitis S4 glycosyltransferase YP_002550502.1 2877785 D 311402 CDS YP_002550503.1 222149546 7387074 complement(2879183..2879749) 1 NC_011989.1 hypothetical protein 2879749 7387074 Avi_3476 Agrobacterium vitis S4 hypothetical protein YP_002550503.1 2879183 R 311402 CDS YP_002550504.1 222149547 7387075 complement(2879876..2881588) 1 NC_011989.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 2881588 ureC 7387075 ureC Agrobacterium vitis S4 urease subunit alpha YP_002550504.1 2879876 R 311402 CDS YP_002550505.1 222149548 7387076 complement(2881591..2882235) 1 NC_011989.1 urease accessory protein 2882235 7387076 Avi_3478 Agrobacterium vitis S4 urease accessory protein YP_002550505.1 2881591 R 311402 CDS YP_002550506.1 222149549 7388755 complement(2882251..2882661) 1 NC_011989.1 hypothetical protein 2882661 7388755 Avi_3481 Agrobacterium vitis S4 hypothetical protein YP_002550506.1 2882251 R 311402 CDS YP_002550507.1 222149550 7388756 complement(2882658..2882963) 1 NC_011989.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 2882963 ureB 7388756 ureB Agrobacterium vitis S4 urease subunit beta YP_002550507.1 2882658 R 311402 CDS YP_002550508.1 222149551 7388757 complement(2883058..2883312) 1 NC_011989.1 hypothetical protein 2883312 7388757 Avi_3484 Agrobacterium vitis S4 hypothetical protein YP_002550508.1 2883058 R 311402 CDS YP_002550509.1 222149552 7388758 complement(2883317..2883619) 1 NC_011989.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 2883619 ureA 7388758 ureA Agrobacterium vitis S4 urease subunit gamma YP_002550509.1 2883317 R 311402 CDS YP_002550510.1 222149553 7388759 complement(2883643..2884479) 1 NC_011989.1 urease accessory protein 2884479 ureD 7388759 ureD Agrobacterium vitis S4 urease accessory protein YP_002550510.1 2883643 R 311402 CDS YP_002550511.1 222149554 7388760 complement(2884484..2885482) 1 NC_011989.1 hypothetical protein 2885482 7388760 Avi_3487 Agrobacterium vitis S4 hypothetical protein YP_002550511.1 2884484 R 311402 CDS YP_002550512.1 222149555 7388761 complement(2885633..2886976) 1 NC_011989.1 hypothetical protein 2886976 7388761 Avi_3488 Agrobacterium vitis S4 hypothetical protein YP_002550512.1 2885633 R 311402 CDS YP_002550513.1 222149556 7388762 complement(2887178..2887873) 1 NC_011989.1 ABC transporter 2887873 7388762 Avi_3489 Agrobacterium vitis S4 ABC transporter YP_002550513.1 2887178 R 311402 CDS YP_002550514.1 222149557 7388763 complement(2887885..2888640) 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (urea/amide) 2888640 7388763 Avi_3490 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (urea/amide) YP_002550514.1 2887885 R 311402 CDS YP_002550515.1 222149558 7388764 complement(2888644..2889804) 1 NC_011989.1 urea/amide ABC transporter permease 2889804 7388764 Avi_3491 Agrobacterium vitis S4 urea/amide ABC transporter permease YP_002550515.1 2888644 R 311402 CDS YP_002550516.1 222149559 7388765 complement(2889801..2891429) 1 NC_011989.1 urea/amide ABC transporter permease 2891429 7388765 Avi_3492 Agrobacterium vitis S4 urea/amide ABC transporter permease YP_002550516.1 2889801 R 311402 CDS YP_002550517.1 222149560 7388766 complement(2891516..2892805) 1 NC_011989.1 ABC transporter substrate binding protein (urea/amide) 2892805 7388766 Avi_3494 Agrobacterium vitis S4 ABC transporter substrate binding protein (urea/amide) YP_002550517.1 2891516 R 311402 CDS YP_002550518.1 222149561 7388767 2893086..2893667 1 NC_011989.1 heme oxygenase 2893667 7388767 Avi_3495 Agrobacterium vitis S4 heme oxygenase YP_002550518.1 2893086 D 311402 CDS YP_002550519.1 222149562 7388768 2893645..2896203 1 NC_011989.1 bacteriophytochrome protein 2896203 7388768 Avi_3496 Agrobacterium vitis S4 bacteriophytochrome protein YP_002550519.1 2893645 D 311402 CDS YP_002550520.1 222149563 7388769 complement(2896297..2897127) 1 NC_011989.1 aspartyl/asparaginyl beta-hydroxylase 2897127 7388769 Avi_3497 Agrobacterium vitis S4 aspartyl/asparaginyl beta-hydroxylase YP_002550520.1 2896297 R 311402 CDS YP_002550521.1 222149564 7388770 2897425..2900802 1 NC_011989.1 two component sensor kinase 2900802 7388770 Avi_3498 Agrobacterium vitis S4 two component sensor kinase YP_002550521.1 2897425 D 311402 CDS YP_002550522.1 222149565 7388771 2901073..2902011 1 NC_011989.1 transcriptional regulator LuxR family 2902011 7388771 Avi_3499 Agrobacterium vitis S4 transcriptional regulator LuxR family YP_002550522.1 2901073 D 311402 CDS YP_002550523.1 222149566 7388772 2902709..2903242 1 NC_011989.1 hypothetical protein 2903242 7388772 Avi_3501 Agrobacterium vitis S4 hypothetical protein YP_002550523.1 2902709 D 311402 CDS YP_002550524.1 222149567 7388773 complement(2903337..2903822) 1 NC_011989.1 protein kinase C substrate protein 2903822 7388773 Avi_3502 Agrobacterium vitis S4 protein kinase C substrate protein YP_002550524.1 2903337 R 311402 CDS YP_002550525.1 222149568 7388774 complement(2904493..2904804) 1 NC_011989.1 plasmid stable inheritance protein K 2904804 pemK 7388774 pemK Agrobacterium vitis S4 plasmid stable inheritance protein K YP_002550525.1 2904493 R 311402 CDS YP_002550526.1 222149569 7388775 complement(2904824..2905081) 1 NC_011989.1 plasmid stable inheritance protein I 2905081 pemI 7388775 pemI Agrobacterium vitis S4 plasmid stable inheritance protein I YP_002550526.1 2904824 R 311402 CDS YP_002550527.1 222149570 7388776 complement(2905175..2906155) 1 NC_011989.1 hypothetical protein 2906155 7388776 Avi_3505 Agrobacterium vitis S4 hypothetical protein YP_002550527.1 2905175 R 311402 CDS YP_002550528.1 222149571 7388777 complement(2907113..2907373) 1 NC_011989.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 2907373 minE 7388777 minE Agrobacterium vitis S4 cell division topological specificity factor MinE YP_002550528.1 2907113 R 311402 CDS YP_002550529.1 222149572 7388778 complement(2907370..2908185) 1 NC_011989.1 cell division inhibitor 2908185 minD 7388778 minD Agrobacterium vitis S4 cell division inhibitor YP_002550529.1 2907370 R 311402 CDS YP_002550530.1 222149573 7388779 complement(2908318..2909118) 1 NC_011989.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 2909118 minC 7388779 minC Agrobacterium vitis S4 septum formation inhibitor YP_002550530.1 2908318 R 311402 CDS YP_002550531.1 222149574 7388780 complement(2909347..2910462) 1 NC_011989.1 amino acid ABC transporter substrate-binding protein 2910462 7388780 Avi_3510 Agrobacterium vitis S4 amino acid ABC transporter substrate-binding protein YP_002550531.1 2909347 R 311402 CDS YP_002550532.1 222149575 7388781 complement(2910596..2910949) 1 NC_011989.1 hypothetical protein 2910949 7388781 Avi_3511 Agrobacterium vitis S4 hypothetical protein YP_002550532.1 2910596 R 311402 CDS YP_002550533.1 222149576 7388782 complement(2911004..2911735) 1 NC_011989.1 ABC transporter ATPase 2911735 7388782 Avi_3512 Agrobacterium vitis S4 ABC transporter ATPase YP_002550533.1 2911004 R 311402 CDS YP_002550534.1 222149577 7388783 complement(2911732..2912610) 1 NC_011989.1 ABC transporter ATPase 2912610 7388783 Avi_3513 Agrobacterium vitis S4 ABC transporter ATPase YP_002550534.1 2911732 R 311402 CDS YP_002550535.1 222149578 7388784 complement(2912607..2913998) 1 NC_011989.1 branched-chain amino acid ABC transporter permease 2913998 7388784 Avi_3514 Agrobacterium vitis S4 branched-chain amino acid ABC transporter permease YP_002550535.1 2912607 R 311402 CDS YP_002550536.1 222149579 7388785 complement(2914003..2914905) 1 NC_011989.1 ABC transporter permease 2914905 livH 7388785 livH Agrobacterium vitis S4 ABC transporter permease YP_002550536.1 2914003 R 311402 CDS YP_002550537.1 222149580 7388786 complement(2915168..2915794) 1 NC_011989.1 transcriptional regulator protein 2915794 7388786 Avi_3517 Agrobacterium vitis S4 transcriptional regulator protein YP_002550537.1 2915168 R 311402 CDS YP_002550538.1 222149581 7388787 2916112..2917317 1 NC_011989.1 MFS permease 2917317 7388787 Avi_3518 Agrobacterium vitis S4 MFS permease YP_002550538.1 2916112 D 311402 CDS YP_002550539.1 222149582 7388788 2917796..2918425 1 NC_011989.1 adenylate sulfate kinase 2918425 7388788 Avi_3519 Agrobacterium vitis S4 adenylate sulfate kinase YP_002550539.1 2917796 D 311402 CDS YP_002550540.1 222149583 7388789 2918499..2919281 1 NC_011989.1 exopolysaccharide production protein PssB 2919281 pssB 7388789 pssB Agrobacterium vitis S4 exopolysaccharide production protein PssB YP_002550540.1 2918499 D 311402 CDS YP_002550541.1 222149584 7388790 2919538..2920548 1 NC_011989.1 hypothetical protein 2920548 7388790 Avi_3522 Agrobacterium vitis S4 hypothetical protein YP_002550541.1 2919538 D 311402 CDS YP_002550542.1 222149585 7388791 2920837..2921517 1 NC_011989.1 exopolysaccharide production protein 2921517 7388791 Avi_3523 Agrobacterium vitis S4 exopolysaccharide production protein YP_002550542.1 2920837 D 311402 CDS YP_002550543.1 222149586 7388792 2922069..2922344 1 NC_011989.1 hypothetical protein 2922344 7388792 Avi_3524 Agrobacterium vitis S4 hypothetical protein YP_002550543.1 2922069 D 311402 CDS YP_002550544.1 222149587 7388793 complement(2923096..2923446) 1 NC_011989.1 hypothetical protein 2923446 7388793 Avi_3526 Agrobacterium vitis S4 hypothetical protein YP_002550544.1 2923096 R 311402 CDS YP_002550545.1 222149588 7388794 2923892..2924593 1 NC_011989.1 two component response regulator 2924593 ctrA 7388794 ctrA Agrobacterium vitis S4 two component response regulator YP_002550545.1 2923892 D 311402 CDS YP_002550546.1 222149589 7388795 complement(2924838..2925197) 1 NC_011989.1 two component response regulator 2925197 petR 7388795 petR Agrobacterium vitis S4 two component response regulator YP_002550546.1 2924838 R 311402 CDS YP_002550547.1 222149590 7388796 complement(2925484..2926134) 1 NC_011989.1 hypothetical protein 2926134 7388796 Avi_3529 Agrobacterium vitis S4 hypothetical protein YP_002550547.1 2925484 R 311402 CDS YP_002550548.1 222149591 7388797 2926314..2926901 1 NC_011989.1 hypothetical protein 2926901 7388797 Avi_3530 Agrobacterium vitis S4 hypothetical protein YP_002550548.1 2926314 D 311402 CDS YP_002550549.1 222149592 7388798 2927065..2927787 1 NC_011989.1 hypothetical protein 2927787 7388798 Avi_3531 Agrobacterium vitis S4 hypothetical protein YP_002550549.1 2927065 D 311402 CDS YP_002550550.1 222149593 7388799 2927784..2928092 1 NC_011989.1 hypothetical protein 2928092 7388799 Avi_3532 Agrobacterium vitis S4 hypothetical protein YP_002550550.1 2927784 D 311402 CDS YP_002550551.1 222149594 7388800 complement(2928150..2928989) 1 NC_011989.1 RNA methylase 2928989 7388800 Avi_3534 Agrobacterium vitis S4 RNA methylase YP_002550551.1 2928150 R 311402 CDS YP_002550552.1 222149595 7388801 complement(2929002..2929382) 1 NC_011989.1 hypothetical protein 2929382 7388801 Avi_3535 Agrobacterium vitis S4 hypothetical protein YP_002550552.1 2929002 R 311402 CDS YP_002550553.1 222149596 7388802 2929463..2930491 1 NC_011989.1 ribosomal large subunit pseudouridine synthase RluD subfamily 2930491 rluD 7388802 rluD Agrobacterium vitis S4 ribosomal large subunit pseudouridine synthase RluD subfamily YP_002550553.1 2929463 D 311402 CDS YP_002550554.1 222149597 7388803 2930528..2931811 1 NC_011989.1 oxidoreductase 2931811 7388803 Avi_3537 Agrobacterium vitis S4 oxidoreductase YP_002550554.1 2930528 D 311402 CDS YP_002550555.1 222149598 7388804 2931954..2932856 1 NC_011989.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 2932856 rpoH 7388804 rpoH Agrobacterium vitis S4 RNA polymerase factor sigma-32 YP_002550555.1 2931954 D 311402 CDS YP_002550556.1 222149599 7388805 2933115..2933696 1 NC_011989.1 ABC transporter permease 2933696 7388805 Avi_3539 Agrobacterium vitis S4 ABC transporter permease YP_002550556.1 2933115 D 311402 CDS YP_002550557.1 222149600 7388806 complement(2933754..2935028) 1 NC_011989.1 arsenical pump membrane protein 2935028 arsB 7388806 arsB Agrobacterium vitis S4 arsenical pump membrane protein YP_002550557.1 2933754 R 311402 CDS YP_002550558.1 222149601 7388807 2935203..2936498 1 NC_011989.1 MFS permease 2936498 7388807 Avi_3541 Agrobacterium vitis S4 MFS permease YP_002550558.1 2935203 D 311402 CDS YP_002550559.1 222149602 7388808 complement(2936639..2938786) 1 NC_011989.1 hypothetical protein 2938786 7388808 Avi_3542 Agrobacterium vitis S4 hypothetical protein YP_002550559.1 2936639 R 311402 CDS YP_002550560.1 222149603 7388809 complement(2938846..2940144) 1 NC_011989.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2940144 purA 7388809 purA Agrobacterium vitis S4 adenylosuccinate synthetase YP_002550560.1 2938846 R 311402 CDS YP_002550561.1 222149604 7388810 2940522..2941415 1 NC_011989.1 hypothetical protein 2941415 7388810 Avi_3545 Agrobacterium vitis S4 hypothetical protein YP_002550561.1 2940522 D 311402 CDS YP_002550562.1 222149605 7388811 complement(2941425..2942204) 1 NC_011989.1 serine/threonine protein phosphatase I 2942204 prp1 7388811 prp1 Agrobacterium vitis S4 serine/threonine protein phosphatase I YP_002550562.1 2941425 R 311402 CDS YP_002550563.1 222149606 7388812 2942508..2943308 1 NC_011989.1 creatinine amidohydrolase 2943308 7388812 Avi_3547 Agrobacterium vitis S4 creatinine amidohydrolase YP_002550563.1 2942508 D 311402 CDS YP_002550564.1 222149607 7388813 complement(2943293..2944249) 1 NC_011989.1 LysR family transcriptional regulator 2944249 7388813 Avi_3548 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550564.1 2943293 R 311402 CDS YP_002550565.1 222149608 7388814 2944489..2945508 1 NC_011989.1 ABC transporter substrate-binding protein 2945508 7388814 Avi_3549 Agrobacterium vitis S4 ABC transporter substrate-binding protein YP_002550565.1 2944489 D 311402 CDS YP_002550566.1 222149609 7388815 2945709..2946683 1 NC_011989.1 ABC transporter ATPase 2946683 7388815 Avi_3551 Agrobacterium vitis S4 ABC transporter ATPase YP_002550566.1 2945709 D 311402 CDS YP_002550567.1 222149610 7388816 2946680..2947537 1 NC_011989.1 ABC transporter permease 2947537 7388816 Avi_3552 Agrobacterium vitis S4 ABC transporter permease YP_002550567.1 2946680 D 311402 CDS YP_002550568.1 222149611 7388817 2947534..2948868 1 NC_011989.1 cytosine deaminase-like protein 2948868 7388817 Avi_3553 Agrobacterium vitis S4 cytosine deaminase-like protein YP_002550568.1 2947534 D 311402 CDS YP_002550569.1 222149612 7388818 2948872..2950278 1 NC_011989.1 hypothetical protein 2950278 7388818 Avi_3554 Agrobacterium vitis S4 hypothetical protein YP_002550569.1 2948872 D 311402 CDS YP_002550570.1 222149613 7388819 2950503..2951084 1 NC_011989.1 NAD(P)H dehydrogenase 2951084 7388819 Avi_3555 Agrobacterium vitis S4 NAD(P)H dehydrogenase YP_002550570.1 2950503 D 311402 CDS YP_002550571.1 222149614 7388820 complement(2951094..2951810) 1 NC_011989.1 two component sensor kinase 2951810 7388820 Avi_3556 Agrobacterium vitis S4 two component sensor kinase YP_002550571.1 2951094 R 311402 CDS YP_002550572.1 222149615 7388821 complement(2951910..2952311) 1 NC_011989.1 hypothetical protein 2952311 7388821 Avi_3557 Agrobacterium vitis S4 hypothetical protein YP_002550572.1 2951910 R 311402 CDS YP_002550573.1 222149616 7388822 complement(2952558..2952947) 1 NC_011989.1 hypothetical protein 2952947 7388822 Avi_3558 Agrobacterium vitis S4 hypothetical protein YP_002550573.1 2952558 R 311402 CDS YP_002550574.1 222149617 7388823 complement(2952944..2954371) 1 NC_011989.1 aldehyde dehydrogenase 2954371 7388823 Avi_3559 Agrobacterium vitis S4 aldehyde dehydrogenase YP_002550574.1 2952944 R 311402 CDS YP_002550575.1 222149618 7388824 complement(2954582..2955283) 1 NC_011989.1 uracil-DNA glycosylase 2955283 ung 7388824 ung Agrobacterium vitis S4 uracil-DNA glycosylase YP_002550575.1 2954582 R 311402 CDS YP_002550576.1 222149619 7388825 complement(2955309..2956106) 1 NC_011989.1 aldolase 2956106 7388825 Avi_3561 Agrobacterium vitis S4 aldolase YP_002550576.1 2955309 R 311402 CDS YP_002550577.1 222149620 7388826 2956252..2957205 1 NC_011989.1 hypothetical protein 2957205 7388826 Avi_3563 Agrobacterium vitis S4 hypothetical protein YP_002550577.1 2956252 D 311402 CDS YP_002550578.1 222149621 7388827 complement(2957165..2959090) 1 NC_011989.1 bifunctional enzyme including aminotransferase and chitin synthase 2959090 7388827 Avi_3564 Agrobacterium vitis S4 bifunctional enzyme including aminotransferase and chitin synthase YP_002550578.1 2957165 R 311402 CDS YP_002550579.1 222149622 7388828 complement(2959159..2960391) 1 NC_011989.1 hypothetical protein 2960391 7388828 Avi_3565 Agrobacterium vitis S4 hypothetical protein YP_002550579.1 2959159 R 311402 CDS YP_002550580.1 222149623 7388829 complement(2960422..2962428) 1 NC_011989.1 hypothetical protein 2962428 7388829 Avi_3566 Agrobacterium vitis S4 hypothetical protein YP_002550580.1 2960422 R 311402 CDS YP_002550581.1 222149624 7388830 2963028..2964347 1 NC_011989.1 ABC transporter substrate binding protein (sorbitol) 2964347 7388830 Avi_3567 Agrobacterium vitis S4 ABC transporter substrate binding protein (sorbitol) YP_002550581.1 2963028 D 311402 CDS YP_002550582.1 222149625 7388831 2964643..2965515 1 NC_011989.1 sorbitol/mannitol ABC transporter permease 2965515 7388831 Avi_3568 Agrobacterium vitis S4 sorbitol/mannitol ABC transporter permease YP_002550582.1 2964643 D 311402 CDS YP_002550583.1 222149626 7388832 2965519..2966349 1 NC_011989.1 sorbitol/mannitol ABC transporter permease 2966349 7388832 Avi_3569 Agrobacterium vitis S4 sorbitol/mannitol ABC transporter permease YP_002550583.1 2965519 D 311402 CDS YP_002550584.1 222149627 7388833 2966362..2967360 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (sorbitol/mannitol) 2967360 7388833 Avi_3570 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sorbitol/mannitol) YP_002550584.1 2966362 D 311402 CDS YP_002550585.1 222149628 7388834 2967357..2968133 1 NC_011989.1 Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 2968133 7388834 Avi_3571 Agrobacterium vitis S4 sorbitol dehydrogenase YP_002550585.1 2967357 D 311402 CDS YP_002550586.1 222149629 7388835 2968440..2969927 1 NC_011989.1 mannitol 2-dehydrogenase 2969927 mtlK 7388835 mtlK Agrobacterium vitis S4 mannitol 2-dehydrogenase YP_002550586.1 2968440 D 311402 CDS YP_002550587.1 222149630 7388836 2969939..2970613 1 NC_011989.1 hypothetical protein 2970613 7388836 Avi_3573 Agrobacterium vitis S4 hypothetical protein YP_002550587.1 2969939 D 311402 CDS YP_002550588.1 222149631 7386495 2970639..2972210 1 NC_011989.1 ribitol kinase 2972210 7386495 Avi_3574 Agrobacterium vitis S4 ribitol kinase YP_002550588.1 2970639 D 311402 CDS YP_002550589.1 222149632 7388009 2972422..2973630 1 NC_011989.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2973630 mnmA 7388009 mnmA Agrobacterium vitis S4 tRNA-specific 2-thiouridylase MnmA YP_002550589.1 2972422 D 311402 CDS YP_002550590.1 222149633 7387163 2974161..2976317 1 NC_011989.1 hydroxamate-type ferrisiderophore receptor 2976317 fhuA 7387163 fhuA Agrobacterium vitis S4 hydroxamate-type ferrisiderophore receptor YP_002550590.1 2974161 D 311402 CDS YP_002550591.1 222149634 7388011 complement(2976503..2976883) 1 NC_011989.1 hypothetical protein 2976883 7388011 Avi_3578 Agrobacterium vitis S4 hypothetical protein YP_002550591.1 2976503 R 311402 CDS YP_002550592.1 222149635 7388012 complement(2976956..2978935) 1 NC_011989.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 2978935 fhuB 7388012 fhuB Agrobacterium vitis S4 iron-hydroxamate transporter permease subunit YP_002550592.1 2976956 R 311402 CDS YP_002550593.1 222149636 7388013 complement(2978932..2979765) 1 NC_011989.1 ABC transporter substrate binding protein (ferrichrome) 2979765 fhuD 7388013 fhuD Agrobacterium vitis S4 ABC transporter substrate binding protein (ferrichrome) YP_002550593.1 2978932 R 311402 CDS YP_002550594.1 222149637 7388014 complement(2979821..2980636) 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (ferrichrome) 2980636 fhuC 7388014 fhuC Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (ferrichrome) YP_002550594.1 2979821 R 311402 CDS YP_002550595.1 222149638 7388015 2980829..2981710 1 NC_011989.1 AraC family transcriptional regulator 2981710 7388015 Avi_3583 Agrobacterium vitis S4 AraC family transcriptional regulator YP_002550595.1 2980829 D 311402 CDS YP_002550596.1 222149639 7388016 2981989..2984145 1 NC_011989.1 ferrichrome receptor precursor protein 2984145 7388016 Avi_3585 Agrobacterium vitis S4 ferrichrome receptor precursor protein YP_002550596.1 2981989 D 311402 CDS YP_002550597.1 222149640 7388017 complement(2984196..2984921) 1 NC_011989.1 hypothetical protein 2984921 7388017 Avi_3586 Agrobacterium vitis S4 hypothetical protein YP_002550597.1 2984196 R 311402 CDS YP_002550598.1 222149641 7388018 2985225..2985809 1 NC_011989.1 hypothetical protein 2985809 7388018 Avi_3587 Agrobacterium vitis S4 hypothetical protein YP_002550598.1 2985225 D 311402 CDS YP_002550599.1 222149642 7388019 complement(2986345..2987157) 1 NC_011989.1 hypothetical protein 2987157 7388019 Avi_3590 Agrobacterium vitis S4 hypothetical protein YP_002550599.1 2986345 R 311402 CDS YP_002550600.1 222149643 7388020 complement(2987599..2988603) 1 NC_011989.1 Cytochrome bd type quinol oxidase subunit 2 protein 2988603 7388020 Avi_3592 Agrobacterium vitis S4 Cytochrome bd type quinol oxidase subunit 2 protein YP_002550600.1 2987599 R 311402 CDS YP_002550601.1 222149644 7388021 complement(2988593..2990011) 1 NC_011989.1 cytochrome ubiquinol oxidase subunit 1 transmembrane protein 2990011 7388021 Avi_3593 Agrobacterium vitis S4 cytochrome ubiquinol oxidase subunit 1 transmembrane protein YP_002550601.1 2988593 R 311402 CDS YP_002550602.1 222149645 7388022 complement(2990219..2991814) 1 NC_011989.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2991814 serA 7388022 serA Agrobacterium vitis S4 D-3-phosphoglycerate dehydrogenase YP_002550602.1 2990219 R 311402 CDS YP_002550603.1 222149646 7388023 complement(2991899..2993077) 1 NC_011989.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 2993077 serC 7388023 serC Agrobacterium vitis S4 phosphoserine aminotransferase YP_002550603.1 2991899 R 311402 CDS YP_002550604.1 222149647 7388024 2993347..2993937 1 NC_011989.1 hypothetical protein 2993937 7388024 Avi_3598 Agrobacterium vitis S4 hypothetical protein YP_002550604.1 2993347 D 311402 CDS YP_002550605.1 222149648 7388025 complement(2993874..2994860) 1 NC_011989.1 hypothetical protein 2994860 7388025 Avi_3600 Agrobacterium vitis S4 hypothetical protein YP_002550605.1 2993874 R 311402 CDS YP_002550606.1 222149649 7388026 complement(2995108..2995926) 1 NC_011989.1 outer surface protein 2995926 7388026 Avi_3602 Agrobacterium vitis S4 outer surface protein YP_002550606.1 2995108 R 311402 CDS YP_002550607.1 222149650 7388027 complement(2996064..2997080) 1 NC_011989.1 flavin dependent oxidoreductase 2997080 7388027 Avi_3603 Agrobacterium vitis S4 flavin dependent oxidoreductase YP_002550607.1 2996064 R 311402 CDS YP_002550608.1 222149651 7388028 2997286..2997795 1 NC_011989.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2997795 ruvC 7388028 ruvC Agrobacterium vitis S4 Holliday junction resolvase YP_002550608.1 2997286 D 311402 CDS YP_002550609.1 222149652 7388029 2997821..2998438 1 NC_011989.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2998438 ruvA 7388029 ruvA Agrobacterium vitis S4 Holliday junction DNA helicase RuvA YP_002550609.1 2997821 D 311402 CDS YP_002550610.1 222149653 7388030 2998493..2998801 1 NC_011989.1 Regulators of stationary/sporulation gene expression protein 2998801 7388030 Avi_3606 Agrobacterium vitis S4 Regulators of stationary/sporulation gene expression protein YP_002550610.1 2998493 D 311402 CDS YP_002550611.1 222149654 7388031 2999147..3000190 1 NC_011989.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3000190 ruvB 7388031 ruvB Agrobacterium vitis S4 Holliday junction DNA helicase RuvB YP_002550611.1 2999147 D 311402 CDS YP_002550612.1 222149655 7388032 3000187..3001077 1 NC_011989.1 Phosphohydrolase 3001077 7388032 Avi_3610 Agrobacterium vitis S4 Phosphohydrolase YP_002550612.1 3000187 D 311402 CDS YP_002550613.1 222149656 7388033 3001088..3001597 1 NC_011989.1 MutT/nudix family protein 3001597 mutT 7388033 mutT Agrobacterium vitis S4 MutT/nudix family protein YP_002550613.1 3001088 D 311402 CDS YP_002550614.1 222149657 7388034 3001594..3002103 1 NC_011989.1 MutT/nudix family protein 3002103 mutT 7388034 mutT Agrobacterium vitis S4 MutT/nudix family protein YP_002550614.1 3001594 D 311402 CDS YP_002550615.1 222149658 7388035 3002093..3002653 1 NC_011989.1 hypothetical protein 3002653 7388035 Avi_3614 Agrobacterium vitis S4 hypothetical protein YP_002550615.1 3002093 D 311402 CDS YP_002550616.1 222149659 7388036 3002665..3003114 1 NC_011989.1 tol-pal system-associated acyl-CoA thioesterase 3003114 ybgC 7388036 ybgC Agrobacterium vitis S4 tol-pal system-associated acyl-CoA thioesterase YP_002550616.1 3002665 D 311402 CDS YP_002550617.1 222149660 7388037 3003566..3004285 1 NC_011989.1 protein TolQ 3004285 tolQ 7388037 tolQ Agrobacterium vitis S4 protein TolQ YP_002550617.1 3003566 D 311402 CDS YP_002550618.1 222149661 7388038 3004335..3004793 1 NC_011989.1 protein TolR 3004793 tolR 7388038 tolR Agrobacterium vitis S4 protein TolR YP_002550618.1 3004335 D 311402 CDS YP_002550619.1 222149662 7388039 3004803..3005972 1 NC_011989.1 hypothetical protein 3005972 tolA 7388039 tolA Agrobacterium vitis S4 hypothetical protein YP_002550619.1 3004803 D 311402 CDS YP_002550620.1 222149663 7388040 3006025..3007332 1 NC_011989.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3007332 tolB 7388040 tolB Agrobacterium vitis S4 translocation protein TolB YP_002550620.1 3006025 D 311402 CDS YP_002550621.1 222149664 7388041 3007564..3008097 1 NC_011989.1 peptidoglycan-associated lipoprotein 3008097 pal 7388041 pal Agrobacterium vitis S4 peptidoglycan-associated lipoprotein YP_002550621.1 3007564 D 311402 CDS YP_002550622.1 222149665 7388042 3008314..3009315 1 NC_011989.1 tol-pal system protein YbgF 3009315 ygbF 7388042 ygbF Agrobacterium vitis S4 tol-pal system protein YbgF YP_002550622.1 3008314 D 311402 CDS YP_002550623.1 222149666 7388043 3009315..3010679 1 NC_011989.1 hypothetical protein 3010679 7388043 Avi_3626 Agrobacterium vitis S4 hypothetical protein YP_002550623.1 3009315 D 311402 CDS YP_002550624.1 222149667 7388044 3010686..3012731 1 NC_011989.1 metalloprotease 3012731 ftsH 7388044 ftsH Agrobacterium vitis S4 metalloprotease YP_002550624.1 3010686 D 311402 CDS YP_002550625.1 222149668 7388045 3013000..3014352 1 NC_011989.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3014352 glmM 7388045 glmM Agrobacterium vitis S4 phosphoglucosamine mutase YP_002550625.1 3013000 D 311402 CDS YP_002550626.1 222149669 7388046 complement(3014452..3015198) 1 NC_011989.1 hypothetical protein 3015198 7388046 Avi_3631 Agrobacterium vitis S4 hypothetical protein YP_002550626.1 3014452 R 311402 CDS YP_002550627.1 222149670 7388047 3015463..3015966 1 NC_011989.1 hypothetical protein 3015966 7388047 Avi_3632 Agrobacterium vitis S4 hypothetical protein YP_002550627.1 3015463 D 311402 CDS YP_002550628.1 222149671 7388048 complement(3015984..3016856) 1 NC_011989.1 hypothetical protein 3016856 7388048 Avi_3633 Agrobacterium vitis S4 hypothetical protein YP_002550628.1 3015984 R 311402 CDS YP_002550629.1 222149672 7388049 complement(3016995..3018875) 1 NC_011989.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 3018875 7388049 Avi_3634 Agrobacterium vitis S4 potassium/proton antiporter YP_002550629.1 3016995 R 311402 CDS YP_002550630.1 222149673 7388050 complement(3019703..3021301) 1 NC_011989.1 hypothetical protein 3021301 7388050 Avi_3635 Agrobacterium vitis S4 hypothetical protein YP_002550630.1 3019703 R 311402 CDS YP_002550631.1 222149674 7388051 complement(3021548..3021991) 1 NC_011989.1 hypothetical protein 3021991 7388051 Avi_3636 Agrobacterium vitis S4 hypothetical protein YP_002550631.1 3021548 R 311402 CDS YP_002550632.1 222149675 7388052 complement(3022721..3023728) 1 NC_011989.1 Glyceraldehyde 3-Phosphate Dehydrogenase 3023728 gapA 7388052 gapA Agrobacterium vitis S4 Glyceraldehyde 3-Phosphate Dehydrogenase YP_002550632.1 3022721 R 311402 CDS YP_002550633.1 222149676 7388053 complement(3023927..3025903) 1 NC_011989.1 transketolase 3025903 tktA 7388053 tktA Agrobacterium vitis S4 transketolase YP_002550633.1 3023927 R 311402 CDS YP_002550634.1 222149677 7388054 3026354..3026623 1 NC_011989.1 hypothetical protein 3026623 7388054 Avi_3640 Agrobacterium vitis S4 hypothetical protein YP_002550634.1 3026354 D 311402 CDS YP_002550635.1 222149678 7388055 3026660..3027025 1 NC_011989.1 hypothetical protein 3027025 7388055 Avi_3642 Agrobacterium vitis S4 hypothetical protein YP_002550635.1 3026660 D 311402 CDS YP_002550636.1 222149679 7387988 3027371..3028009 1 NC_011989.1 transcriptional regulator protein 3028009 7387988 Avi_3644 Agrobacterium vitis S4 transcriptional regulator protein YP_002550636.1 3027371 D 311402 CDS YP_002550637.1 222149680 7388057 complement(3028147..3030189) 1 NC_011989.1 methyl-accepting chemotaxis protein 3030189 mclA 7388057 mclA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550637.1 3028147 R 311402 CDS YP_002550638.1 222149681 7388058 3030501..3031079 1 NC_011989.1 5,10-methenyltetrahydrofolate synthetase 3031079 7388058 Avi_3649 Agrobacterium vitis S4 5,10-methenyltetrahydrofolate synthetase YP_002550638.1 3030501 D 311402 CDS YP_002550639.1 222149682 7388059 3031093..3031917 1 NC_011989.1 hypothetical protein 3031917 7388059 Avi_3650 Agrobacterium vitis S4 hypothetical protein YP_002550639.1 3031093 D 311402 CDS YP_002550640.1 222149683 7388060 3032037..3033239 1 NC_011989.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3033239 pgk 7388060 pgk Agrobacterium vitis S4 phosphoglycerate kinase YP_002550640.1 3032037 D 311402 CDS YP_002550641.1 222149684 7388061 3033424..3034449 1 NC_011989.1 fructose bisphosphate aldolase 3034449 7388061 Avi_3652 Agrobacterium vitis S4 fructose bisphosphate aldolase YP_002550641.1 3033424 D 311402 CDS YP_002550642.1 222149685 7388063 3035557..3036726 1 NC_011989.1 hypothetical protein 3036726 7388063 Avi_3655 Agrobacterium vitis S4 hypothetical protein YP_002550642.1 3035557 D 311402 CDS YP_002550643.1 222149686 7388064 3036931..3037257 1 NC_011989.1 hypothetical protein 3037257 7388064 Avi_3656 Agrobacterium vitis S4 hypothetical protein YP_002550643.1 3036931 D 311402 CDS YP_002550644.1 222149687 7388065 complement(3037377..3037532) 1 NC_011989.1 hypothetical protein 3037532 7388065 Avi_3657 Agrobacterium vitis S4 hypothetical protein YP_002550644.1 3037377 R 311402 CDS YP_002550645.1 222149688 7388066 3037820..3039103 1 NC_011989.1 MFS permease 3039103 7388066 Avi_3661 Agrobacterium vitis S4 MFS permease YP_002550645.1 3037820 D 311402 CDS YP_002550646.1 222149689 7388067 3039107..3039301 1 NC_011989.1 hypothetical protein 3039301 7388067 Avi_3662 Agrobacterium vitis S4 hypothetical protein YP_002550646.1 3039107 D 311402 CDS YP_002550647.1 222149690 7388068 3039710..3040225 1 NC_011989.1 hypothetical protein 3040225 7388068 Avi_3663 Agrobacterium vitis S4 hypothetical protein YP_002550647.1 3039710 D 311402 CDS YP_002550648.1 222149691 7388069 complement(3040423..3040644) 1 NC_011989.1 50S ribosomal protein L31 3040644 rpmE 7388069 rpmE Agrobacterium vitis S4 50S ribosomal protein L31 YP_002550648.1 3040423 R 311402 CDS YP_002550649.1 222149692 7388070 3040811..3042637 1 NC_011989.1 ABC transporter ATPase 3042637 7388070 Avi_3667 Agrobacterium vitis S4 ABC transporter ATPase YP_002550649.1 3040811 D 311402 CDS YP_002550650.1 222149693 7388071 complement(3042642..3044300) 1 NC_011989.1 proposed role in polysaccahride synthesis; putative FAD-binding dehydrogenase 3044300 7388071 Avi_3668 Agrobacterium vitis S4 putative FAD-binding dehydrogenase YP_002550650.1 3042642 R 311402 CDS YP_002550651.1 222149694 7388072 complement(3044643..3045674) 1 NC_011989.1 hypothetical protein 3045674 motB 7388072 motB Agrobacterium vitis S4 hypothetical protein YP_002550651.1 3044643 R 311402 CDS YP_002550652.1 222149695 7388073 complement(3045678..3046691) 1 NC_011989.1 hypothetical protein 3046691 7388073 Avi_3671 Agrobacterium vitis S4 hypothetical protein YP_002550652.1 3045678 R 311402 CDS YP_002550653.1 222149696 7388074 complement(3046876..3047676) 1 NC_011989.1 extragenic suppressor protein SuhB 3047676 suhB 7388074 suhB Agrobacterium vitis S4 extragenic suppressor protein SuhB YP_002550653.1 3046876 R 311402 CDS YP_002550654.1 222149697 7388075 complement(3047820..3049442) 1 NC_011989.1 enhanced entry protein 3049442 enhC 7388075 enhC Agrobacterium vitis S4 enhanced entry protein YP_002550654.1 3047820 R 311402 CDS YP_002550655.1 222149698 7388076 complement(3049439..3050122) 1 NC_011989.1 catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole; thiamine-phosphate pyrophosphorylase 3050122 thiE 7388076 thiE Agrobacterium vitis S4 thiamine-phosphate pyrophosphorylase YP_002550655.1 3049439 R 311402 CDS YP_002550656.1 222149699 7388077 3050453..3051220 1 NC_011989.1 hypothetical protein 3051220 7388077 Avi_3677 Agrobacterium vitis S4 hypothetical protein YP_002550656.1 3050453 D 311402 CDS YP_002550657.1 222149700 7388078 3051403..3051663 1 NC_011989.1 transcriptional regulator ArsR family 3051663 7388078 Avi_3678 Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002550657.1 3051403 D 311402 CDS YP_002550658.1 222149701 7388079 complement(3052004..3052177) 1 NC_011989.1 hypothetical protein 3052177 7388079 Avi_3680 Agrobacterium vitis S4 hypothetical protein YP_002550658.1 3052004 R 311402 CDS YP_002550659.1 222149702 7388080 3052488..3052721 1 NC_011989.1 hypothetical protein 3052721 7388080 Avi_3681 Agrobacterium vitis S4 hypothetical protein YP_002550659.1 3052488 D 311402 CDS YP_002550660.1 222149703 7388081 3052738..3053238 1 NC_011989.1 phosphoribosylaminoimidazole carboxylase catalytic subunit 3053238 purE 7388081 purE Agrobacterium vitis S4 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_002550660.1 3052738 D 311402 CDS YP_002550661.1 222149704 7388082 3053266..3054321 1 NC_011989.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 3054321 purK 7388082 purK Agrobacterium vitis S4 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_002550661.1 3053266 D 311402 CDS YP_002550662.1 222149705 7388083 3054484..3054609 1 NC_011989.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 3054609 rpmJ 7388083 rpmJ Agrobacterium vitis S4 50S ribosomal protein L36 YP_002550662.1 3054484 D 311402 CDS YP_002550663.1 222149706 7388084 3054718..3055503 1 NC_011989.1 hypothetical protein 3055503 7388084 Avi_3687 Agrobacterium vitis S4 hypothetical protein YP_002550663.1 3054718 D 311402 CDS YP_002550664.1 222149707 7388085 3055765..3056772 1 NC_011989.1 hypothetical protein 3056772 7388085 Avi_3689 Agrobacterium vitis S4 hypothetical protein YP_002550664.1 3055765 D 311402 CDS YP_002550665.1 222149708 7388086 complement(3057422..3058861) 1 NC_011989.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3058861 pykA 7388086 pykA Agrobacterium vitis S4 pyruvate kinase YP_002550665.1 3057422 R 311402 CDS YP_002550666.1 222149709 7388087 complement(3058858..3059472) 1 NC_011989.1 hypothetical protein 3059472 7388087 Avi_3691 Agrobacterium vitis S4 hypothetical protein YP_002550666.1 3058858 R 311402 CDS YP_002550667.1 222149710 7388088 3059829..3060632 1 NC_011989.1 hypothetical protein 3060632 7388088 Avi_3692 Agrobacterium vitis S4 hypothetical protein YP_002550667.1 3059829 D 311402 CDS YP_002550668.1 222149711 7388089 3060629..3060955 1 NC_011989.1 hypothetical protein 3060955 7388089 Avi_3693 Agrobacterium vitis S4 hypothetical protein YP_002550668.1 3060629 D 311402 CDS YP_002550669.1 222149712 7388090 3061183..3061446 1 NC_011989.1 hypothetical protein 3061446 7388090 Avi_3695 Agrobacterium vitis S4 hypothetical protein YP_002550669.1 3061183 D 311402 CDS YP_002550670.1 222149713 7388091 complement(3061767..3062168) 1 NC_011989.1 hypothetical protein 3062168 7388091 Avi_3697 Agrobacterium vitis S4 hypothetical protein YP_002550670.1 3061767 R 311402 CDS YP_002550671.1 222149714 7388174 complement(3062165..3063658) 1 NC_011989.1 hypothetical protein 3063658 7388174 Avi_3698 Agrobacterium vitis S4 hypothetical protein YP_002550671.1 3062165 R 311402 CDS YP_002550672.1 222149715 7388175 complement(3064108..3065427) 1 NC_011989.1 sigma 54 dependent transcriptional activator 3065427 7388175 Avi_3699 Agrobacterium vitis S4 sigma 54 dependent transcriptional activator YP_002550672.1 3064108 R 311402 CDS YP_002550673.1 222149716 7388176 3066232..3068091 1 NC_011989.1 oligoendopeptidase F 3068091 pepF 7388176 pepF Agrobacterium vitis S4 oligoendopeptidase F YP_002550673.1 3066232 D 311402 CDS YP_002550674.1 222149717 7388177 3068111..3069346 1 NC_011989.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase 3069346 pabB 7388177 pabB Agrobacterium vitis S4 aminodeoxychorismate synthase YP_002550674.1 3068111 D 311402 CDS YP_002550675.1 222149718 7388178 3069331..3069975 1 NC_011989.1 hypothetical protein 3069975 7388178 Avi_3704 Agrobacterium vitis S4 hypothetical protein YP_002550675.1 3069331 D 311402 CDS YP_002550676.1 222149719 7388179 3070209..3071330 1 NC_011989.1 hypothetical protein 3071330 7388179 Avi_3705 Agrobacterium vitis S4 hypothetical protein YP_002550676.1 3070209 D 311402 CDS YP_002550677.1 222149720 7388180 3071611..3073053 1 NC_011989.1 homospermidine synthase 3073053 7388180 Avi_3707 Agrobacterium vitis S4 homospermidine synthase YP_002550677.1 3071611 D 311402 CDS YP_002550678.1 222149721 7388181 3073391..3073783 1 NC_011989.1 outer membrane lipoprotein 3073783 7388181 Avi_3710 Agrobacterium vitis S4 outer membrane lipoprotein YP_002550678.1 3073391 D 311402 CDS YP_002550679.1 222149722 7388182 3073967..3075883 1 NC_011989.1 5prime-nucleotidase 3075883 7388182 Avi_3711 Agrobacterium vitis S4 5prime-nucleotidase YP_002550679.1 3073967 D 311402 CDS YP_002550680.1 222149723 7388183 3076032..3077066 1 NC_011989.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3077066 hemH 7388183 hemH Agrobacterium vitis S4 ferrochelatase YP_002550680.1 3076032 D 311402 CDS YP_002550681.1 222149724 7388184 complement(3077184..3078425) 1 NC_011989.1 hypothetical protein 3078425 7388184 Avi_3713 Agrobacterium vitis S4 hypothetical protein YP_002550681.1 3077184 R 311402 CDS YP_002550682.1 222149725 7388185 3078652..3080691 1 NC_011989.1 methyl-accepting chemotaxis protein 3080691 mcpA 7388185 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550682.1 3078652 D 311402 CDS YP_002550683.1 222149726 7388186 complement(3080774..3081988) 1 NC_011989.1 hypothetical protein 3081988 7388186 Avi_3715 Agrobacterium vitis S4 hypothetical protein YP_002550683.1 3080774 R 311402 CDS YP_002550684.1 222149727 7388187 complement(3082077..3082844) 1 NC_011989.1 radical activating protein 3082844 exsD 7388187 exsD Agrobacterium vitis S4 radical activating protein YP_002550684.1 3082077 R 311402 CDS YP_002550685.1 222149728 7388188 complement(3082823..3083179) 1 NC_011989.1 6-pyruvoyl tetrahydropterin synthase 3083179 exsC 7388188 exsC Agrobacterium vitis S4 6-pyruvoyl tetrahydropterin synthase YP_002550685.1 3082823 R 311402 CDS YP_002550686.1 222149729 7388189 complement(3083184..3083891) 1 NC_011989.1 succinoglycan biosynthesis regulator 3083891 exsB 7388189 exsB Agrobacterium vitis S4 succinoglycan biosynthesis regulator YP_002550686.1 3083184 R 311402 CDS YP_002550687.1 222149730 7388190 3084089..3085123 1 NC_011989.1 hypothetical protein 3085123 7388190 Avi_3720 Agrobacterium vitis S4 hypothetical protein YP_002550687.1 3084089 D 311402 CDS YP_002550688.1 222149731 7388191 3085130..3085588 1 NC_011989.1 hypothetical protein 3085588 7388191 Avi_3721 Agrobacterium vitis S4 hypothetical protein YP_002550688.1 3085130 D 311402 CDS YP_002550689.1 222149732 7388192 complement(3085833..3086828) 1 NC_011989.1 capsule expression protein 3086828 kpsF 7388192 kpsF Agrobacterium vitis S4 capsule expression protein YP_002550689.1 3085833 R 311402 CDS YP_002550690.1 222149733 7388193 3087036..3088553 1 NC_011989.1 hypothetical protein 3088553 7388193 Avi_3723 Agrobacterium vitis S4 hypothetical protein YP_002550690.1 3087036 D 311402 CDS YP_002550691.1 222149734 7388194 complement(3088616..3089503) 1 NC_011989.1 UTP-glucose-1-phosphate uridylyltransferase 3089503 galU 7388194 galU Agrobacterium vitis S4 UTP-glucose-1-phosphate uridylyltransferase YP_002550691.1 3088616 R 311402 CDS YP_002550692.1 222149735 7388195 3089761..3090978 1 NC_011989.1 lytic murein transglycosylase 3090978 mltB 7388195 mltB Agrobacterium vitis S4 lytic murein transglycosylase YP_002550692.1 3089761 D 311402 CDS YP_002550693.1 222149736 7388196 3091024..3092250 1 NC_011989.1 hypothetical protein 3092250 7388196 Avi_3728 Agrobacterium vitis S4 hypothetical protein YP_002550693.1 3091024 D 311402 CDS YP_002550694.1 222149737 7388197 complement(3092635..3094569) 1 NC_011989.1 methyl-accepting chemotaxis protein 3094569 7388197 Avi_3729 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550694.1 3092635 R 311402 CDS YP_002550695.1 222149738 7388198 complement(3094925..3096379) 1 NC_011989.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3096379 gltD 7388198 gltD Agrobacterium vitis S4 glutamate synthase subunit beta YP_002550695.1 3094925 R 311402 CDS YP_002550696.1 222149739 7388199 complement(3096568..3096966) 1 NC_011989.1 nucleic acid-binding protein 3096966 7388199 Avi_3732 Agrobacterium vitis S4 nucleic acid-binding protein YP_002550696.1 3096568 R 311402 CDS YP_002550697.1 222149740 7388200 complement(3096963..3097265) 1 NC_011989.1 Virulence-associated protein 3097265 7388200 Avi_3733 Agrobacterium vitis S4 Virulence-associated protein YP_002550697.1 3096963 R 311402 CDS YP_002550698.1 222149741 7388201 complement(3097290..3102011) 1 NC_011989.1 glutamate synthase large subunit 3102011 gltB 7388201 gltB Agrobacterium vitis S4 glutamate synthase large subunit YP_002550698.1 3097290 R 311402 CDS YP_002550699.1 222149742 7388202 3102724..3103770 1 NC_011989.1 threonine aldolase 3103770 7388202 Avi_3736 Agrobacterium vitis S4 threonine aldolase YP_002550699.1 3102724 D 311402 CDS YP_002550700.1 222149743 7388203 complement(3103857..3104324) 1 NC_011989.1 small heat shock protein 3104324 ibpA 7388203 ibpA Agrobacterium vitis S4 small heat shock protein YP_002550700.1 3103857 R 311402 CDS YP_002550701.1 222149744 7388204 3104754..3105752 1 NC_011989.1 lysophospholipase 3105752 pldB 7388204 pldB Agrobacterium vitis S4 lysophospholipase YP_002550701.1 3104754 D 311402 CDS YP_002550702.1 222149745 7388205 3105969..3107018 1 NC_011989.1 hypothetical protein 3107018 7388205 Avi_3741 Agrobacterium vitis S4 hypothetical protein YP_002550702.1 3105969 D 311402 CDS YP_002550703.1 222149746 7388206 complement(3107079..3107852) 1 NC_011989.1 inositol monophosphatase family protein 3107852 7388206 Avi_3743 Agrobacterium vitis S4 inositol monophosphatase family protein YP_002550703.1 3107079 R 311402 CDS YP_002550704.1 222149747 7387983 complement(3108205..3109101) 1 NC_011989.1 hypothetical protein 3109101 7387983 Avi_3744 Agrobacterium vitis S4 hypothetical protein YP_002550704.1 3108205 R 311402 CDS YP_002550705.1 222149748 7388208 3109401..3109766 1 NC_011989.1 chemotaxis response regulator 3109766 7388208 Avi_3746 Agrobacterium vitis S4 chemotaxis response regulator YP_002550705.1 3109401 D 311402 CDS YP_002550706.1 222149749 7387164 3110309..3111451 1 NC_011989.1 Small-conductance mechanosensitive ion channel 3111451 7387164 Avi_3749 Agrobacterium vitis S4 Small-conductance mechanosensitive ion channel YP_002550706.1 3110309 D 311402 CDS YP_002550707.1 222149750 7388210 3111723..3113150 1 NC_011989.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3113150 7388210 Avi_3751 Agrobacterium vitis S4 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002550707.1 3111723 D 311402 CDS YP_002550708.1 222149751 7388211 3113434..3116778 1 NC_011989.1 hypothetical protein 3116778 7388211 Avi_3752 Agrobacterium vitis S4 hypothetical protein YP_002550708.1 3113434 D 311402 CDS YP_002550709.1 222149752 7388212 3117015..3119429 1 NC_011989.1 hypothetical protein 3119429 7388212 Avi_3754 Agrobacterium vitis S4 hypothetical protein YP_002550709.1 3117015 D 311402 CDS YP_002550710.1 222149753 7388213 3119444..3120322 1 NC_011989.1 hypothetical protein 3120322 7388213 Avi_3755 Agrobacterium vitis S4 hypothetical protein YP_002550710.1 3119444 D 311402 CDS YP_002550711.1 222149754 7388214 3120501..3121814 1 NC_011989.1 hypothetical protein 3121814 7388214 Avi_3756 Agrobacterium vitis S4 hypothetical protein YP_002550711.1 3120501 D 311402 CDS YP_002550712.1 222149755 7388215 3121907..3122119 1 NC_011989.1 hypothetical protein 3122119 7388215 Avi_3757 Agrobacterium vitis S4 hypothetical protein YP_002550712.1 3121907 D 311402 CDS YP_002550713.1 222149756 7388216 3122436..3124904 1 NC_011989.1 glycogen phosphorylase 3124904 glgP 7388216 glgP Agrobacterium vitis S4 glycogen phosphorylase YP_002550713.1 3122436 D 311402 CDS YP_002550714.1 222149757 7388217 3124904..3127153 1 NC_011989.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 3127153 glgB 7388217 glgB Agrobacterium vitis S4 glycogen branching enzyme YP_002550714.1 3124904 D 311402 CDS YP_002550715.1 222149758 7388218 3127228..3128493 1 NC_011989.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 3128493 glgC 7388218 glgC Agrobacterium vitis S4 glucose-1-phosphate adenylyltransferase YP_002550715.1 3127228 D 311402 CDS YP_002550716.1 222149759 7388219 3128499..3129935 1 NC_011989.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 3129935 glgA 7388219 glgA Agrobacterium vitis S4 glycogen synthase YP_002550716.1 3128499 D 311402 CDS YP_002550717.1 222149760 7388220 3129943..3131571 1 NC_011989.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 3131571 pgm 7388220 pgm Agrobacterium vitis S4 phosphoglucomutase YP_002550717.1 3129943 D 311402 CDS YP_002550718.1 222149761 7388221 3131586..3133535 1 NC_011989.1 glycogen debranching enzyme GlgX 3133535 glgX 7388221 glgX Agrobacterium vitis S4 glycogen debranching enzyme GlgX YP_002550718.1 3131586 D 311402 CDS YP_002550719.1 222149762 7388222 3133839..3134327 1 NC_011989.1 nodulation protein N 3134327 nodN 7388222 nodN Agrobacterium vitis S4 nodulation protein N YP_002550719.1 3133839 D 311402 CDS YP_002550720.1 222149763 7388223 3134329..3135378 1 NC_011989.1 hypothetical protein 3135378 7388223 Avi_3766 Agrobacterium vitis S4 hypothetical protein YP_002550720.1 3134329 D 311402 CDS YP_002550721.1 222149764 7388224 complement(3135958..3137487) 1 NC_011989.1 hypothetical protein 3137487 7388224 Avi_3768 Agrobacterium vitis S4 hypothetical protein YP_002550721.1 3135958 R 311402 CDS YP_002550722.1 222149765 7388225 complement(3137497..3138036) 1 NC_011989.1 hypothetical protein 3138036 7388225 Avi_3769 Agrobacterium vitis S4 hypothetical protein YP_002550722.1 3137497 R 311402 CDS YP_002550723.1 222149766 7388226 3138301..3138525 1 NC_011989.1 hypothetical protein 3138525 7388226 Avi_3770 Agrobacterium vitis S4 hypothetical protein YP_002550723.1 3138301 D 311402 CDS YP_002550724.1 222149767 7388227 complement(3138601..3139410) 1 NC_011989.1 O-linked GlcNAc transferase 3139410 7388227 Avi_3772 Agrobacterium vitis S4 O-linked GlcNAc transferase YP_002550724.1 3138601 R 311402 CDS YP_002550725.1 222149768 7388228 complement(3139950..3140189) 1 NC_011989.1 30S ribosomal protein S21 3140189 rpsU 7388228 rpsU Agrobacterium vitis S4 30S ribosomal protein S21 YP_002550725.1 3139950 R 311402 CDS YP_002550726.1 222149769 7388230 3140646..3141899 1 NC_011989.1 sarcosine oxidase subunit beta 3141899 soxB 7388230 soxB Agrobacterium vitis S4 sarcosine oxidase subunit beta YP_002550726.1 3140646 D 311402 CDS YP_002550727.1 222149770 7388229 3141916..3142236 1 NC_011989.1 sarcosine oxidase subunit delta 3142236 soxD 7388229 soxD Agrobacterium vitis S4 sarcosine oxidase subunit delta YP_002550727.1 3141916 D 311402 CDS YP_002550728.1 222149771 7388231 3142233..3145226 1 NC_011989.1 sarcosine oxidase subunit alpha 3145226 soxA 7388231 soxA Agrobacterium vitis S4 sarcosine oxidase subunit alpha YP_002550728.1 3142233 D 311402 CDS YP_002550729.1 222149772 7388232 3145219..3145785 1 NC_011989.1 sarcosine oxidase subunit gamma 3145785 soxG 7388232 soxG Agrobacterium vitis S4 sarcosine oxidase subunit gamma YP_002550729.1 3145219 D 311402 CDS YP_002550730.1 222149773 7388233 complement(3146108..3147169) 1 NC_011989.1 nucleoside-diphosphate-sugar epimerase 3147169 7388233 Avi_3779 Agrobacterium vitis S4 nucleoside-diphosphate-sugar epimerase YP_002550730.1 3146108 R 311402 CDS YP_002550731.1 222149774 7388234 3147268..3147660 1 NC_011989.1 transcriptional regulator protein 3147660 7388234 Avi_3780 Agrobacterium vitis S4 transcriptional regulator protein YP_002550731.1 3147268 D 311402 CDS YP_002550732.1 222149775 7388235 complement(3147717..3147998) 1 NC_011989.1 hypothetical protein 3147998 7388235 Avi_3781 Agrobacterium vitis S4 hypothetical protein YP_002550732.1 3147717 R 311402 CDS YP_002550733.1 222149776 7388236 complement(3147985..3148245) 1 NC_011989.1 DNA-damage-inducible protein 3148245 7388236 Avi_3782 Agrobacterium vitis S4 DNA-damage-inducible protein YP_002550733.1 3147985 R 311402 CDS YP_002550734.1 222149777 7388237 3148402..3148650 1 NC_011989.1 hypothetical protein 3148650 7388237 Avi_3784 Agrobacterium vitis S4 hypothetical protein YP_002550734.1 3148402 D 311402 CDS YP_002550735.1 222149778 7388238 3148640..3148930 1 NC_011989.1 stability protein StbE 3148930 7388238 Avi_3785 Agrobacterium vitis S4 stability protein StbE YP_002550735.1 3148640 D 311402 CDS YP_002550736.1 222149779 7388239 3149289..3149756 1 NC_011989.1 hypothetical protein 3149756 7388239 Avi_3786 Agrobacterium vitis S4 hypothetical protein YP_002550736.1 3149289 D 311402 CDS YP_002550737.1 222149780 7388240 3149874..3150146 1 NC_011989.1 hypothetical protein 3150146 7388240 Avi_3787 Agrobacterium vitis S4 hypothetical protein YP_002550737.1 3149874 D 311402 CDS YP_002550738.1 222149781 7388241 3150187..3150393 1 NC_011989.1 hypothetical protein 3150393 7388241 Avi_3788 Agrobacterium vitis S4 hypothetical protein YP_002550738.1 3150187 D 311402 CDS YP_002550739.1 222149782 7388242 complement(3150428..3151534) 1 NC_011989.1 periplasmic mannitol-binding protein 3151534 7388242 Avi_3789 Agrobacterium vitis S4 periplasmic mannitol-binding protein YP_002550739.1 3150428 R 311402 CDS YP_002550740.1 222149783 7388243 3151736..3152500 1 NC_011989.1 hypothetical protein 3152500 7388243 Avi_3790 Agrobacterium vitis S4 hypothetical protein YP_002550740.1 3151736 D 311402 CDS YP_002550741.1 222149784 7388244 complement(3152651..3153610) 1 NC_011989.1 dehydrogenase 3153610 7388244 Avi_3791 Agrobacterium vitis S4 dehydrogenase YP_002550741.1 3152651 R 311402 CDS YP_002550742.1 222149785 7388245 complement(3153623..3154648) 1 NC_011989.1 transcriptional regulator LacI family 3154648 pckR 7388245 pckR Agrobacterium vitis S4 transcriptional regulator LacI family YP_002550742.1 3153623 R 311402 CDS YP_002550743.1 222149786 7388246 complement(3154756..3155298) 1 NC_011989.1 transcriptional regulator MarR family 3155298 7388246 Avi_3793 Agrobacterium vitis S4 transcriptional regulator MarR family YP_002550743.1 3154756 R 311402 CDS YP_002550744.1 222149787 7388247 3155388..3156209 1 NC_011989.1 creatinine amidohydrolase 3156209 7388247 Avi_3794 Agrobacterium vitis S4 creatinine amidohydrolase YP_002550744.1 3155388 D 311402 CDS YP_002550745.1 222149788 7388248 3156258..3157355 1 NC_011989.1 hypothetical protein 3157355 7388248 Avi_3796 Agrobacterium vitis S4 hypothetical protein YP_002550745.1 3156258 D 311402 CDS YP_002550746.1 222149789 7388249 3157411..3158397 1 NC_011989.1 hypothetical protein 3158397 7388249 Avi_3798 Agrobacterium vitis S4 hypothetical protein YP_002550746.1 3157411 D 311402 CDS YP_002550747.1 222149790 7388250 3158647..3160452 1 NC_011989.1 methyl-accepting chemotaxis protein 3160452 7388250 Avi_3799 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550747.1 3158647 D 311402 CDS YP_002550748.1 222149791 7388251 complement(3160578..3161279) 1 NC_011989.1 outer membrane protein 3161279 7388251 Avi_3800 Agrobacterium vitis S4 outer membrane protein YP_002550748.1 3160578 R 311402 CDS YP_002550749.1 222149792 7388252 3161700..3163328 1 NC_011989.1 Phospholipase C protein 3163328 7388252 Avi_3801 Agrobacterium vitis S4 Phospholipase C protein YP_002550749.1 3161700 D 311402 CDS YP_002550750.1 222149793 7388253 3163354..3164718 1 NC_011989.1 hypothetical protein 3164718 7388253 Avi_3802 Agrobacterium vitis S4 hypothetical protein YP_002550750.1 3163354 D 311402 CDS YP_002550751.1 222149794 7388254 complement(3164930..3165520) 1 NC_011989.1 acetyltransferase 3165520 7388254 Avi_3804 Agrobacterium vitis S4 acetyltransferase YP_002550751.1 3164930 R 311402 CDS YP_002550752.1 222149795 7388255 complement(3165600..3166733) 1 NC_011989.1 ornithine decarboxylase 3166733 speF 7388255 speF Agrobacterium vitis S4 ornithine decarboxylase YP_002550752.1 3165600 R 311402 CDS YP_002550753.1 222149796 7388257 3167282..3168211 1 NC_011989.1 LysR family transcriptional regulator 3168211 ptxR 7388257 ptxR Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550753.1 3167282 D 311402 CDS YP_002550754.1 222149797 7388506 3168419..3169078 1 NC_011989.1 hypothetical protein 3169078 7388506 Avi_3809 Agrobacterium vitis S4 hypothetical protein YP_002550754.1 3168419 D 311402 CDS YP_002550755.1 222149798 7388507 3169072..3170241 1 NC_011989.1 hypothetical protein 3170241 7388507 Avi_3811 Agrobacterium vitis S4 hypothetical protein YP_002550755.1 3169072 D 311402 CDS YP_002550756.1 222149799 7388508 complement(3170223..3170435) 1 NC_011989.1 hypothetical protein 3170435 7388508 Avi_3812 Agrobacterium vitis S4 hypothetical protein YP_002550756.1 3170223 R 311402 CDS YP_002550757.1 222149800 7388509 complement(3170432..3171121) 1 NC_011989.1 acetyltransferase 3171121 7388509 Avi_3813 Agrobacterium vitis S4 acetyltransferase YP_002550757.1 3170432 R 311402 CDS YP_002550758.1 222149801 7388510 complement(3171413..3172117) 1 NC_011989.1 hypothetical protein 3172117 7388510 Avi_3814 Agrobacterium vitis S4 hypothetical protein YP_002550758.1 3171413 R 311402 CDS YP_002550759.1 222149802 7388511 complement(3172218..3172856) 1 NC_011989.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 3172856 7388511 Avi_3816 Agrobacterium vitis S4 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_002550759.1 3172218 R 311402 CDS YP_002550760.1 222149803 7388512 3173016..3173510 1 NC_011989.1 hypothetical protein 3173510 7388512 Avi_3819 Agrobacterium vitis S4 hypothetical protein YP_002550760.1 3173016 D 311402 CDS YP_002550761.1 222149804 7388513 3173488..3174414 1 NC_011989.1 hypothetical protein 3174414 7388513 Avi_3820 Agrobacterium vitis S4 hypothetical protein YP_002550761.1 3173488 D 311402 CDS YP_002550762.1 222149805 7388514 3174425..3175123 1 NC_011989.1 hypothetical protein 3175123 7388514 Avi_3821 Agrobacterium vitis S4 hypothetical protein YP_002550762.1 3174425 D 311402 CDS YP_002550763.1 222149806 7388515 3175220..3175597 1 NC_011989.1 hypothetical protein 3175597 7388515 Avi_3822 Agrobacterium vitis S4 hypothetical protein YP_002550763.1 3175220 D 311402 CDS YP_002550764.1 222149807 7388516 3175674..3176618 1 NC_011989.1 hypothetical protein 3176618 7388516 Avi_3823 Agrobacterium vitis S4 hypothetical protein YP_002550764.1 3175674 D 311402 CDS YP_002550765.1 222149808 7388517 complement(3176671..3177420) 1 NC_011989.1 hypothetical protein 3177420 7388517 Avi_3825 Agrobacterium vitis S4 hypothetical protein YP_002550765.1 3176671 R 311402 CDS YP_002550766.1 222149809 7388518 complement(3177534..3177992) 1 NC_011989.1 hypothetical protein 3177992 7388518 Avi_3826 Agrobacterium vitis S4 hypothetical protein YP_002550766.1 3177534 R 311402 CDS YP_002550767.1 222149810 7388519 complement(3177989..3179362) 1 NC_011989.1 beta-glucosidase 3179362 bgl 7388519 bgl Agrobacterium vitis S4 beta-glucosidase YP_002550767.1 3177989 R 311402 CDS YP_002550768.1 222149811 7388520 3179599..3180645 1 NC_011989.1 hypothetical protein 3180645 7388520 Avi_3829 Agrobacterium vitis S4 hypothetical protein YP_002550768.1 3179599 D 311402 CDS YP_002550769.1 222149812 7388521 complement(3180704..3181885) 1 NC_011989.1 NAD binding oxidoreductase 3181885 7388521 Avi_3830 Agrobacterium vitis S4 NAD binding oxidoreductase YP_002550769.1 3180704 R 311402 CDS YP_002550770.1 222149813 7388522 complement(3181904..3182956) 1 NC_011989.1 hypothetical protein 3182956 7388522 Avi_3831 Agrobacterium vitis S4 hypothetical protein YP_002550770.1 3181904 R 311402 CDS YP_002550771.1 222149814 7388523 complement(3183055..3184362) 1 NC_011989.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 3184362 xylA 7388523 xylA Agrobacterium vitis S4 xylose isomerase YP_002550771.1 3183055 R 311402 CDS YP_002550772.1 222149815 7388524 complement(3184400..3185869) 1 NC_011989.1 xylulokinase 3185869 xylB 7388524 xylB Agrobacterium vitis S4 xylulokinase YP_002550772.1 3184400 R 311402 CDS YP_002550773.1 222149816 7388525 complement(3185893..3186933) 1 NC_011989.1 transcriptional regulator LacI family 3186933 7388525 Avi_3834 Agrobacterium vitis S4 transcriptional regulator LacI family YP_002550773.1 3185893 R 311402 CDS YP_002550774.1 222149817 7388526 complement(3187174..3188751) 1 NC_011989.1 MFS permease 3188751 emrB 7388526 emrB Agrobacterium vitis S4 MFS permease YP_002550774.1 3187174 R 311402 CDS YP_002550775.1 222149818 7388527 complement(3188788..3189963) 1 NC_011989.1 multidrug resistance efflux pump 3189963 emrA 7388527 emrA Agrobacterium vitis S4 multidrug resistance efflux pump YP_002550775.1 3188788 R 311402 CDS YP_002550776.1 222149819 7388528 3190215..3190907 1 NC_011989.1 TetR family transcriptional regulator 3190907 7388528 Avi_3838 Agrobacterium vitis S4 TetR family transcriptional regulator YP_002550776.1 3190215 D 311402 CDS YP_002550777.1 222149820 7388529 3191046..3191810 1 NC_011989.1 hypothetical protein 3191810 7388529 Avi_3839 Agrobacterium vitis S4 hypothetical protein YP_002550777.1 3191046 D 311402 CDS YP_002550778.1 222149821 7388530 3191947..3192654 1 NC_011989.1 putative role in sulfur assimilation; CysZ-like protein 3192654 7388530 Avi_3841 Agrobacterium vitis S4 CysZ-like protein YP_002550778.1 3191947 D 311402 CDS YP_002550779.1 222149822 7388531 complement(3192634..3193398) 1 NC_011989.1 endonuclease III 3193398 nth 7388531 nth Agrobacterium vitis S4 endonuclease III YP_002550779.1 3192634 R 311402 CDS YP_002550780.1 222149823 7388532 3193477..3193920 1 NC_011989.1 hypothetical protein 3193920 7388532 Avi_3844 Agrobacterium vitis S4 hypothetical protein YP_002550780.1 3193477 D 311402 CDS YP_002550781.1 222149824 7388533 3194002..3194889 1 NC_011989.1 methylated-DNA--protein- cysteinemethyltransferase 3194889 ada 7388533 ada Agrobacterium vitis S4 methylated-DNA--protein- cysteinemethyltransferase YP_002550781.1 3194002 D 311402 CDS YP_002550782.1 222149825 7388534 3195015..3195461 1 NC_011989.1 hypothetical protein 3195461 7388534 Avi_3846 Agrobacterium vitis S4 hypothetical protein YP_002550782.1 3195015 D 311402 CDS YP_002550783.1 222149826 7388535 3195670..3196662 1 NC_011989.1 hypothetical protein 3196662 7388535 Avi_3848 Agrobacterium vitis S4 hypothetical protein YP_002550783.1 3195670 D 311402 CDS YP_002550784.1 222149827 7388536 complement(3196747..3197724) 1 NC_011989.1 transcriptional regulator 3197724 7388536 Avi_3849 Agrobacterium vitis S4 transcriptional regulator YP_002550784.1 3196747 R 311402 CDS YP_002550785.1 222149828 7388537 3197936..3198892 1 NC_011989.1 transaldolase B 3198892 tal 7388537 tal Agrobacterium vitis S4 transaldolase B YP_002550785.1 3197936 D 311402 CDS YP_002550786.1 222149829 7388538 complement(3199154..3199747) 1 NC_011989.1 HFLK protein 3199747 hflK 7388538 hflK Agrobacterium vitis S4 HFLK protein YP_002550786.1 3199154 R 311402 CDS YP_002550787.1 222149830 7388539 3200048..3200953 1 NC_011989.1 hypothetical protein 3200953 7388539 Avi_3854 Agrobacterium vitis S4 hypothetical protein YP_002550787.1 3200048 D 311402 CDS YP_002550788.1 222149831 7388540 3201075..3202325 1 NC_011989.1 hypothetical protein 3202325 7388540 Avi_3855 Agrobacterium vitis S4 hypothetical protein YP_002550788.1 3201075 D 311402 CDS YP_002550789.1 222149832 7388541 complement(3202419..3203915) 1 NC_011989.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 3203915 lysS 7388541 lysS Agrobacterium vitis S4 lysyl-tRNA synthetase YP_002550789.1 3202419 R 311402 CDS YP_002550790.1 222149833 7388542 complement(3204019..3205473) 1 NC_011989.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3205473 gltX 7388542 gltX Agrobacterium vitis S4 glutamyl-tRNA synthetase YP_002550790.1 3204019 R 311402 CDS YP_002550791.1 222149834 7388543 complement(3205860..3207620) 1 NC_011989.1 transporter 3207620 7388543 Avi_3860 Agrobacterium vitis S4 transporter YP_002550791.1 3205860 R 311402 CDS YP_002550792.1 222149835 7388544 complement(3207815..3209152) 1 NC_011989.1 TPR repeat protein 3209152 7388544 Avi_3861 Agrobacterium vitis S4 TPR repeat protein YP_002550792.1 3207815 R 311402 CDS YP_002550793.1 222149836 7388545 complement(3209149..3210519) 1 NC_011989.1 secretion protein-like protein 3210519 7388545 Avi_3862 Agrobacterium vitis S4 secretion protein-like protein YP_002550793.1 3209149 R 311402 CDS YP_002550794.1 222149837 7388546 complement(3210491..3212701) 1 NC_011989.1 ABC transporter ATPase 3212701 7388546 Avi_3863 Agrobacterium vitis S4 ABC transporter ATPase YP_002550794.1 3210491 R 311402 CDS YP_002550795.1 222149838 7388547 3212981..3214183 1 NC_011989.1 glycosyltransferase 3214183 7388547 Avi_3864 Agrobacterium vitis S4 glycosyltransferase YP_002550795.1 3212981 D 311402 CDS YP_002550796.1 222149839 7388548 complement(3214167..3215678) 1 NC_011989.1 TPR repeat protein 3215678 7388548 Avi_3865 Agrobacterium vitis S4 TPR repeat protein YP_002550796.1 3214167 R 311402 CDS YP_002550797.1 222149840 7388549 complement(3215675..3220708) 1 NC_011989.1 TPR repeat protein 3220708 7388549 Avi_3866 Agrobacterium vitis S4 TPR repeat protein YP_002550797.1 3215675 R 311402 CDS YP_002550798.1 222149841 7388550 complement(3220890..3221279) 1 NC_011989.1 hypothetical protein 3221279 7388550 Avi_3867 Agrobacterium vitis S4 hypothetical protein YP_002550798.1 3220890 R 311402 CDS YP_002550799.1 222149842 7388551 complement(3221418..3226136) 1 NC_011989.1 Ca 2+ binding protein 3226136 7388551 Avi_3869 Agrobacterium vitis S4 Ca 2+ binding protein YP_002550799.1 3221418 R 311402 CDS YP_002550800.1 222149843 7388552 complement(3226300..3226938) 1 NC_011989.1 uncharacterized ABC-type transport system permease protein 3226938 7388552 Avi_3870 Agrobacterium vitis S4 uncharacterized ABC-type transport system permease protein YP_002550800.1 3226300 R 311402 CDS YP_002550801.1 222149844 7388553 complement(3227049..3228902) 1 NC_011989.1 ABC transporter ATPase 3228902 7388553 Avi_3871 Agrobacterium vitis S4 ABC transporter ATPase YP_002550801.1 3227049 R 311402 CDS YP_002550802.1 222149845 7388554 complement(3228982..3230145) 1 NC_011989.1 hippurate hydrolase 3230145 7388554 Avi_3872 Agrobacterium vitis S4 hippurate hydrolase YP_002550802.1 3228982 R 311402 CDS YP_002550803.1 222149846 7388555 3230389..3232146 1 NC_011989.1 ABC transporter substrate binding protein (oligopeptide) 3232146 7388555 Avi_3874 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002550803.1 3230389 D 311402 CDS YP_002550804.1 222149847 7388556 3232495..3234201 1 NC_011989.1 ABC transporter substrate binding protein (oligopeptide) 3234201 7388556 Avi_3875 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002550804.1 3232495 D 311402 CDS YP_002550805.1 222149848 7388557 3234328..3235338 1 NC_011989.1 peptide ABC transporter permease 3235338 7388557 Avi_3876 Agrobacterium vitis S4 peptide ABC transporter permease YP_002550805.1 3234328 D 311402 CDS YP_002550806.1 222149849 7388558 3235331..3236248 1 NC_011989.1 peptide ABC transporter permease 3236248 7388558 Avi_3878 Agrobacterium vitis S4 peptide ABC transporter permease YP_002550806.1 3235331 D 311402 CDS YP_002550807.1 222149850 7388559 complement(3236274..3237326) 1 NC_011989.1 ABC transporter 3237326 7388559 Avi_3879 Agrobacterium vitis S4 ABC transporter YP_002550807.1 3236274 R 311402 CDS YP_002550808.1 222149851 7388560 complement(3237401..3240145) 1 NC_011989.1 ABC transporter ATPase 3240145 7388560 Avi_3880 Agrobacterium vitis S4 ABC transporter ATPase YP_002550808.1 3237401 R 311402 CDS YP_002550809.1 222149852 7388561 complement(3240157..3241197) 1 NC_011989.1 HlyD family secretion protein 3241197 7388561 Avi_3881 Agrobacterium vitis S4 HlyD family secretion protein YP_002550809.1 3240157 R 311402 CDS YP_002550810.1 222149853 7388562 3241399..3242400 1 NC_011989.1 hypothetical protein 3242400 7388562 Avi_3882 Agrobacterium vitis S4 hypothetical protein YP_002550810.1 3241399 D 311402 CDS YP_002550811.1 222149854 7388563 3242513..3243679 1 NC_011989.1 phosphonate metabolism protein PhnM 3243679 phnM 7388563 phnM Agrobacterium vitis S4 phosphonate metabolism protein PhnM YP_002550811.1 3242513 D 311402 CDS YP_002550812.1 222149855 7388564 complement(3243683..3244435) 1 NC_011989.1 ABC transporter 3244435 dfpD 7388564 dfpD Agrobacterium vitis S4 ABC transporter YP_002550812.1 3243683 R 311402 CDS YP_002550813.1 222149856 7388565 complement(3244432..3245265) 1 NC_011989.1 ABC transporter 3245265 7388565 Avi_3885 Agrobacterium vitis S4 ABC transporter YP_002550813.1 3244432 R 311402 CDS YP_002550814.1 222149857 7388566 complement(3245262..3246167) 1 NC_011989.1 peptide ABC transporter permease 3246167 7388566 Avi_3886 Agrobacterium vitis S4 peptide ABC transporter permease YP_002550814.1 3245262 R 311402 CDS YP_002550815.1 222149858 7388567 complement(3246185..3247252) 1 NC_011989.1 peptide ABC transporter permease 3247252 7388567 Avi_3887 Agrobacterium vitis S4 peptide ABC transporter permease YP_002550815.1 3246185 R 311402 CDS YP_002550816.1 222149859 7388568 complement(3247268..3248920) 1 NC_011989.1 ABC transporter substrate binding protein (oligopeptide) 3248920 7388568 Avi_3888 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002550816.1 3247268 R 311402 CDS YP_002550817.1 222149860 7388569 complement(3248969..3250021) 1 NC_011989.1 dipeptidase 3250021 7388569 Avi_3889 Agrobacterium vitis S4 dipeptidase YP_002550817.1 3248969 R 311402 CDS YP_002550818.1 222149861 7388570 complement(3250266..3251180) 1 NC_011989.1 2-dehydro-3-deoxygluconokinase 3251180 kdgK 7388570 kdgK Agrobacterium vitis S4 2-dehydro-3-deoxygluconokinase YP_002550818.1 3250266 R 311402 CDS YP_002550819.1 222149862 7388571 complement(3251196..3251891) 1 NC_011989.1 GntR family transcriptional regulator 3251891 7388571 Avi_3891 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002550819.1 3251196 R 311402 CDS YP_002550820.1 222149863 7388572 3252176..3253576 1 NC_011989.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 3253576 7388572 Avi_3892 Agrobacterium vitis S4 glucuronate isomerase YP_002550820.1 3252176 D 311402 CDS YP_002550821.1 222149864 7388573 3253964..3254305 1 NC_011989.1 pectin degradation protein 3254305 kdgF 7388573 kdgF Agrobacterium vitis S4 pectin degradation protein YP_002550821.1 3253964 D 311402 CDS YP_002550822.1 222149865 7388574 3254325..3255146 1 NC_011989.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 3255146 7388574 Avi_3894 Agrobacterium vitis S4 5-keto-4-deoxyuronate isomerase YP_002550822.1 3254325 D 311402 CDS YP_002550823.1 222149866 7388575 3255143..3255889 1 NC_011989.1 2-deoxy-D-gluconate 3-dehydrogenase 3255889 kduD 7388575 kduD Agrobacterium vitis S4 2-deoxy-D-gluconate 3-dehydrogenase YP_002550823.1 3255143 D 311402 CDS YP_002550824.1 222149867 7388576 3255867..3257336 1 NC_011989.1 Altronate oxidoreductase 3257336 uxuB 7388576 uxuB Agrobacterium vitis S4 Altronate oxidoreductase YP_002550824.1 3255867 D 311402 CDS YP_002550825.1 222149868 7388577 3257333..3258526 1 NC_011989.1 mannonate dehydratase 3258526 uxuA 7388577 uxuA Agrobacterium vitis S4 mannonate dehydratase YP_002550825.1 3257333 D 311402 CDS YP_002550826.1 222149869 7388578 3258519..3260051 1 NC_011989.1 uronate isomerase 3260051 uxaA 7388578 uxaA Agrobacterium vitis S4 uronate isomerase YP_002550826.1 3258519 D 311402 CDS YP_002550827.1 222149870 7388579 complement(3260109..3261542) 1 NC_011989.1 NAD(P)+ transhydrogenase beta chain 3261542 pntB 7388579 pntB Agrobacterium vitis S4 NAD(P)+ transhydrogenase beta chain YP_002550827.1 3260109 R 311402 CDS YP_002550828.1 222149871 7388580 complement(3261559..3263136) 1 NC_011989.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 3263136 pntA 7388580 pntA Agrobacterium vitis S4 NAD(P) transhydrogenase subunit alpha YP_002550828.1 3261559 R 311402 CDS YP_002550829.1 222149872 7388581 complement(3263435..3264367) 1 NC_011989.1 LysR family transcriptional regulator 3264367 gbpR 7388581 gbpR Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550829.1 3263435 R 311402 CDS YP_002550830.1 222149873 7388582 3264594..3265658 1 NC_011989.1 sugar binding protein 3265658 chvE 7388582 chvE Agrobacterium vitis S4 sugar binding protein YP_002550830.1 3264594 D 311402 CDS YP_002550831.1 222149874 7388583 3265805..3267319 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (sugar) 3267319 gguA 7388583 gguA Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (sugar) YP_002550831.1 3265805 D 311402 CDS YP_002550832.1 222149875 7388584 3267319..3268518 1 NC_011989.1 sugar ABC transporter permease 3268518 gguB 7388584 gguB Agrobacterium vitis S4 sugar ABC transporter permease YP_002550832.1 3267319 D 311402 CDS YP_002550833.1 222149876 7388585 3268696..3269661 1 NC_011989.1 hypothetical protein 3269661 gguC 7388585 gguC Agrobacterium vitis S4 hypothetical protein YP_002550833.1 3268696 D 311402 CDS YP_002550834.1 222149877 7388586 3269792..3271501 1 NC_011989.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3271501 ilvD 7388586 ilvD Agrobacterium vitis S4 dihydroxy-acid dehydratase YP_002550834.1 3269792 D 311402 CDS YP_002550835.1 222149878 7388587 3271575..3272522 1 NC_011989.1 dehydrogenase 3272522 7388587 Avi_3910 Agrobacterium vitis S4 dehydrogenase YP_002550835.1 3271575 D 311402 CDS YP_002550836.1 222149879 7387924 3272692..3274206 1 NC_011989.1 dehydrogenase 3274206 7387924 Avi_3912 Agrobacterium vitis S4 dehydrogenase YP_002550836.1 3272692 D 311402 CDS YP_002550837.1 222149880 7387272 3274309..3275163 1 NC_011989.1 2-dehydro-3-deoxygalactonokinase 3275163 dgoK 7387272 dgoK Agrobacterium vitis S4 2-dehydro-3-deoxygalactonokinase YP_002550837.1 3274309 D 311402 CDS YP_002550838.1 222149881 7387273 3275179..3275826 1 NC_011989.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 3275826 7387273 Avi_3915 Agrobacterium vitis S4 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_002550838.1 3275179 D 311402 CDS YP_002550839.1 222149882 7387274 3275958..3276320 1 NC_011989.1 hypothetical protein 3276320 7387274 Avi_3917 Agrobacterium vitis S4 hypothetical protein YP_002550839.1 3275958 D 311402 CDS YP_002550840.1 222149883 7387275 complement(3276324..3277181) 1 NC_011989.1 hypothetical protein 3277181 7387275 Avi_3918 Agrobacterium vitis S4 hypothetical protein YP_002550840.1 3276324 R 311402 CDS YP_002550841.1 222149884 7387276 3277376..3278071 1 NC_011989.1 GntR family transcriptional regulator 3278071 7387276 Avi_3919 Agrobacterium vitis S4 GntR family transcriptional regulator YP_002550841.1 3277376 D 311402 CDS YP_002550842.1 222149885 7387277 3278068..3279348 1 NC_011989.1 cynate permease 3279348 7387277 Avi_3920 Agrobacterium vitis S4 cynate permease YP_002550842.1 3278068 D 311402 CDS YP_002550843.1 222149886 7387278 3279601..3285120 1 NC_011989.1 hypothetical protein 3285120 7387278 Avi_3921 Agrobacterium vitis S4 hypothetical protein YP_002550843.1 3279601 D 311402 CDS YP_002550844.1 222149887 7387279 3285117..3287204 1 NC_011989.1 penicillin-binding protein 3287204 pbpC 7387279 pbpC Agrobacterium vitis S4 penicillin-binding protein YP_002550844.1 3285117 D 311402 CDS YP_002550845.1 222149888 7387280 3287516..3290047 1 NC_011989.1 methyl-accepting chemotaxis protein 3290047 mclA 7387280 mclA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550845.1 3287516 D 311402 CDS YP_002550846.1 222149889 7387281 3290207..3291226 1 NC_011989.1 UDP-glucuronic acid epimerase 3291226 lspL 7387281 lspL Agrobacterium vitis S4 UDP-glucuronic acid epimerase YP_002550846.1 3290207 D 311402 CDS YP_002550847.1 222149890 7387282 complement(3291366..3292466) 1 NC_011989.1 hypothetical protein 3292466 redA 7387282 redA Agrobacterium vitis S4 hypothetical protein YP_002550847.1 3291366 R 311402 CDS YP_002550848.1 222149891 7387283 complement(3292579..3293814) 1 NC_011989.1 glucosyltransferase 3293814 redB 7387283 redB Agrobacterium vitis S4 glucosyltransferase YP_002550848.1 3292579 R 311402 CDS YP_002550849.1 222149892 7387284 complement(3293819..3295027) 1 NC_011989.1 hypothetical protein 3295027 7387284 Avi_3927 Agrobacterium vitis S4 hypothetical protein YP_002550849.1 3293819 R 311402 CDS YP_002550850.1 222149893 7387285 complement(3295133..3296317) 1 NC_011989.1 peptide ABC transporter permease 3296317 7387285 Avi_3928 Agrobacterium vitis S4 peptide ABC transporter permease YP_002550850.1 3295133 R 311402 CDS YP_002550851.1 222149894 7387286 complement(3296314..3297312) 1 NC_011989.1 peptide ABC transporter permease 3297312 7387286 Avi_3929 Agrobacterium vitis S4 peptide ABC transporter permease YP_002550851.1 3296314 R 311402 CDS YP_002550852.1 222149895 7387287 complement(3297309..3299189) 1 NC_011989.1 ABC transporter substrate binding protein (oligopeptide) 3299189 7387287 Avi_3931 Agrobacterium vitis S4 ABC transporter substrate binding protein (oligopeptide) YP_002550852.1 3297309 R 311402 CDS YP_002550853.1 222149896 7387288 complement(3299228..3301114) 1 NC_011989.1 ABC transporter nucleotide binding/ATPase (oligopeptide) 3301114 7387288 Avi_3932 Agrobacterium vitis S4 ABC transporter nucleotide binding/ATPase (oligopeptide) YP_002550853.1 3299228 R 311402 CDS YP_002550854.1 222149897 7387289 3301431..3302270 1 NC_011989.1 hypothetical protein 3302270 7387289 Avi_3933 Agrobacterium vitis S4 hypothetical protein YP_002550854.1 3301431 D 311402 CDS YP_002550855.1 222149898 7387290 complement(3302275..3303018) 1 NC_011989.1 hypothetical protein 3303018 7387290 Avi_3934 Agrobacterium vitis S4 hypothetical protein YP_002550855.1 3302275 R 311402 CDS YP_002550856.1 222149899 7387291 complement(3303011..3304111) 1 NC_011989.1 glycosyltransferase 3304111 7387291 Avi_3935 Agrobacterium vitis S4 glycosyltransferase YP_002550856.1 3303011 R 311402 CDS YP_002550857.1 222149900 7387292 3304162..3305679 1 NC_011989.1 UDP-glucose/GDP-mannose dehydrogenase 3305679 7387292 Avi_3939 Agrobacterium vitis S4 UDP-glucose/GDP-mannose dehydrogenase YP_002550857.1 3304162 D 311402 CDS YP_002550858.1 222149901 7387293 3305684..3306166 1 NC_011989.1 hypothetical protein 3306166 7387293 Avi_3940 Agrobacterium vitis S4 hypothetical protein YP_002550858.1 3305684 D 311402 CDS YP_002550859.1 222149902 7387294 complement(3306262..3306726) 1 NC_011989.1 cAMP-dependent protein kinase regulatory subunit 3306726 7387294 Avi_3942 Agrobacterium vitis S4 cAMP-dependent protein kinase regulatory subunit YP_002550859.1 3306262 R 311402 CDS YP_002550860.1 222149903 7387295 complement(3306766..3309486) 1 NC_011989.1 ABC transporter ATPase 3309486 7387295 Avi_3943 Agrobacterium vitis S4 ABC transporter ATPase YP_002550860.1 3306766 R 311402 CDS YP_002550861.1 222149904 7387296 3309827..3310966 1 NC_011989.1 ATP-dependent dsDNA exonuclease 3310966 7387296 Avi_3945 Agrobacterium vitis S4 ATP-dependent dsDNA exonuclease YP_002550861.1 3309827 D 311402 CDS YP_002550862.1 222149905 7387297 3310963..3314037 1 NC_011989.1 exonuclease 3314037 sbcC 7387297 sbcC Agrobacterium vitis S4 exonuclease YP_002550862.1 3310963 D 311402 CDS YP_002550863.1 222149906 7387298 complement(3314185..3316044) 1 NC_011989.1 methyl-accepting chemotaxis protein 3316044 7387298 Avi_3947 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550863.1 3314185 R 311402 CDS YP_002550864.1 222149907 7387978 3323754..3325700 1 NC_011989.1 hypothetical protein 3325700 7387978 Avi_3949 Agrobacterium vitis S4 hypothetical protein YP_002550864.1 3323754 D 311402 CDS YP_002550865.1 222149908 7387300 complement(3325783..3328389) 1 NC_011989.1 ATP-dependent Clp protease ATP-binding subunit 3328389 clpB 7387300 clpB Agrobacterium vitis S4 ATP-dependent Clp protease ATP-binding subunit YP_002550865.1 3325783 R 311402 CDS YP_002550866.1 222149909 7387301 complement(3328720..3329604) 1 NC_011989.1 hypothetical protein 3329604 7387301 Avi_3953 Agrobacterium vitis S4 hypothetical protein YP_002550866.1 3328720 R 311402 CDS YP_002550867.1 222149910 7387302 complement(3330031..3330912) 1 NC_011989.1 protoporphyrinogen oxidase 3330912 hemK 7387302 hemK Agrobacterium vitis S4 protoporphyrinogen oxidase YP_002550867.1 3330031 R 311402 CDS YP_002550868.1 222149911 7387303 complement(3330909..3331988) 1 NC_011989.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3331988 prfA 7387303 prfA Agrobacterium vitis S4 peptide chain release factor 1 YP_002550868.1 3330909 R 311402 CDS YP_002550869.1 222149912 7387304 complement(3332016..3334280) 1 NC_011989.1 phosphoenolpyruvate-protein phosphotransferase 3334280 ptsI 7387304 ptsI Agrobacterium vitis S4 phosphoenolpyruvate-protein phosphotransferase YP_002550869.1 3332016 R 311402 CDS YP_002550870.1 222149913 7387305 complement(3334366..3335640) 1 NC_011989.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 3335640 lysC 7387305 lysC Agrobacterium vitis S4 aspartate kinase YP_002550870.1 3334366 R 311402 CDS YP_002550871.1 222149914 7387306 3336147..3338759 1 NC_011989.1 Protein regulated by acid pH 3338759 lpiA 7387306 lpiA Agrobacterium vitis S4 Protein regulated by acid pH YP_002550871.1 3336147 D 311402 CDS YP_002550872.1 222149915 7387307 3338756..3340183 1 NC_011989.1 virulance and acid tolerance protein 3340183 acvB 7387307 acvB Agrobacterium vitis S4 virulance and acid tolerance protein YP_002550872.1 3338756 D 311402 CDS YP_002550873.1 222149916 7387308 complement(3340323..3341186) 1 NC_011989.1 hypothetical protein 3341186 7387308 Avi_3964 Agrobacterium vitis S4 hypothetical protein YP_002550873.1 3340323 R 311402 CDS YP_002550874.1 222149917 7387309 3341526..3342308 1 NC_011989.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3342308 ubiG 7387309 ubiG Agrobacterium vitis S4 3-demethylubiquinone-9 3-methyltransferase YP_002550874.1 3341526 D 311402 CDS YP_002550875.1 222149918 7387310 complement(3342315..3342896) 1 NC_011989.1 hypothetical protein 3342896 7387310 Avi_3966 Agrobacterium vitis S4 hypothetical protein YP_002550875.1 3342315 R 311402 CDS YP_002550876.1 222149919 7387311 complement(3342899..3343327) 1 NC_011989.1 hypothetical protein 3343327 7387311 Avi_3967 Agrobacterium vitis S4 hypothetical protein YP_002550876.1 3342899 R 311402 CDS YP_002550877.1 222149920 7387312 complement(3343324..3344181) 1 NC_011989.1 amidohydrolase 3344181 7387312 Avi_3968 Agrobacterium vitis S4 amidohydrolase YP_002550877.1 3343324 R 311402 CDS YP_002550878.1 222149921 7387313 complement(3344191..3344445) 1 NC_011989.1 glutaredoxin 3344445 grxC 7387313 grxC Agrobacterium vitis S4 glutaredoxin YP_002550878.1 3344191 R 311402 CDS YP_002550879.1 222149922 7387314 complement(3344497..3345207) 1 NC_011989.1 competence protein F 3345207 comF 7387314 comF Agrobacterium vitis S4 competence protein F YP_002550879.1 3344497 R 311402 CDS YP_002550880.1 222149923 7387315 3345570..3346439 1 NC_011989.1 methyltransferase 3346439 7387315 Avi_3971 Agrobacterium vitis S4 methyltransferase YP_002550880.1 3345570 D 311402 CDS YP_002550881.1 222149924 7387316 complement(3346483..3346671) 1 NC_011989.1 fimbriae associated protein 3346671 pilA 7387316 pilA Agrobacterium vitis S4 fimbriae associated protein YP_002550881.1 3346483 R 311402 CDS YP_002550882.1 222149925 7387317 complement(3346804..3347124) 1 NC_011989.1 hypothetical protein 3347124 7387317 Avi_3974 Agrobacterium vitis S4 hypothetical protein YP_002550882.1 3346804 R 311402 CDS YP_002550883.1 222149926 7387318 complement(3347633..3348040) 1 NC_011989.1 NTP pyrophosphohydrolase MutT family 3348040 7387318 Avi_3976 Agrobacterium vitis S4 NTP pyrophosphohydrolase MutT family YP_002550883.1 3347633 R 311402 CDS YP_002550884.1 222149927 7387319 complement(3348037..3348840) 1 NC_011989.1 acetyltransferase 3348840 7387319 Avi_3977 Agrobacterium vitis S4 acetyltransferase YP_002550884.1 3348037 R 311402 CDS YP_002550885.1 222149928 7387320 complement(3348840..3350081) 1 NC_011989.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 3350081 argJ 7387320 argJ Agrobacterium vitis S4 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_002550885.1 3348840 R 311402 CDS YP_002550886.1 222149929 7387321 complement(3350170..3351045) 1 NC_011989.1 peptidyl-prolyl cis-trans isomerase 3351045 ppiD 7387321 ppiD Agrobacterium vitis S4 peptidyl-prolyl cis-trans isomerase YP_002550886.1 3350170 R 311402 CDS YP_002550887.1 222149930 7387322 3351308..3354007 1 NC_011989.1 preprotein translocase SECA subunit 3354007 secA 7387322 secA Agrobacterium vitis S4 preprotein translocase SECA subunit YP_002550887.1 3351308 D 311402 CDS YP_002550888.1 222149931 7387323 3354156..3355559 1 NC_011989.1 polysaccharide biosynthesis associated protein 3355559 7387323 Avi_3983 Agrobacterium vitis S4 polysaccharide biosynthesis associated protein YP_002550888.1 3354156 D 311402 CDS YP_002550889.1 222149932 7387324 3355580..3356863 1 NC_011989.1 hypothetical protein 3356863 7387324 Avi_3984 Agrobacterium vitis S4 hypothetical protein YP_002550889.1 3355580 D 311402 CDS YP_002550890.1 222149933 7387325 complement(3356877..3358532) 1 NC_011989.1 AMP-(fatty) acid ligase 3358532 7387325 Avi_3985 Agrobacterium vitis S4 AMP-(fatty) acid ligase YP_002550890.1 3356877 R 311402 CDS YP_002550891.1 222149934 7387326 3359601..3360491 1 NC_011989.1 two component response regulator 3360491 pleD 7387326 pleD Agrobacterium vitis S4 two component response regulator YP_002550891.1 3359601 D 311402 CDS YP_002550892.1 222149935 7387327 complement(3360864..3361361) 1 NC_011989.1 IS3 family transposase 3361361 7387327 Avi_3989 Agrobacterium vitis S4 IS3 family transposase YP_002550892.1 3360864 R 311402 CDS YP_002550893.1 222149936 7387328 complement(3361958..3362857) 1 NC_011989.1 aminoglycoside phosphotransferase 3362857 kka 7387328 kka Agrobacterium vitis S4 aminoglycoside phosphotransferase YP_002550893.1 3361958 R 311402 CDS YP_002550894.1 222149937 7387329 complement(3363572..3364939) 1 NC_011989.1 hypothetical protein 3364939 7387329 Avi_3992 Agrobacterium vitis S4 hypothetical protein YP_002550894.1 3363572 R 311402 CDS YP_002550895.1 222149938 7387330 complement(3365453..3366550) 1 NC_011989.1 oxidoreductase 3366550 7387330 Avi_3993 Agrobacterium vitis S4 oxidoreductase YP_002550895.1 3365453 R 311402 CDS YP_002550896.1 222149939 7387331 3366660..3367553 1 NC_011989.1 LysR family transcriptional regulator 3367553 7387331 Avi_3994 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550896.1 3366660 D 311402 CDS YP_002550897.1 222149940 7387332 3368285..3368764 1 NC_011989.1 transcriptional regulator protein 3368764 7387332 Avi_3996 Agrobacterium vitis S4 transcriptional regulator protein YP_002550897.1 3368285 D 311402 CDS YP_002550898.1 222149941 7387168 3369474..3370064 1 NC_011989.1 hypothetical protein 3370064 7387168 Avi_3998 Agrobacterium vitis S4 hypothetical protein YP_002550898.1 3369474 D 311402 CDS YP_002550899.1 222149942 7387334 3370088..3370600 1 NC_011989.1 hypothetical protein 3370600 7387334 Avi_4000 Agrobacterium vitis S4 hypothetical protein YP_002550899.1 3370088 D 311402 CDS YP_002550900.1 222149943 7387335 complement(3370597..3371154) 1 NC_011989.1 hypothetical protein 3371154 7387335 Avi_4001 Agrobacterium vitis S4 hypothetical protein YP_002550900.1 3370597 R 311402 CDS YP_002550901.1 222149944 7387336 complement(3371253..3371906) 1 NC_011989.1 DNA-3-methyladenine glycosidase II 3371906 alkA 7387336 alkA Agrobacterium vitis S4 DNA-3-methyladenine glycosidase II YP_002550901.1 3371253 R 311402 CDS YP_002550902.1 222149945 7387337 3371945..3372847 1 NC_011989.1 glutamyl-tRNA synthetase 3372847 gltX 7387337 gltX Agrobacterium vitis S4 glutamyl-tRNA synthetase YP_002550902.1 3371945 D 311402 CDS YP_002550903.1 222149946 7387338 complement(3372806..3373702) 1 NC_011989.1 ribonuclease transmembrane protein 3373702 7387338 Avi_4005 Agrobacterium vitis S4 ribonuclease transmembrane protein YP_002550903.1 3372806 R 311402 CDS YP_002550904.1 222149947 7387339 3373813..3374646 1 NC_011989.1 short chain dehydrogenase 3374646 7387339 Avi_4006 Agrobacterium vitis S4 short chain dehydrogenase YP_002550904.1 3373813 D 311402 CDS YP_002550905.1 222149948 7387340 3374683..3374880 1 NC_011989.1 hypothetical protein 3374880 7387340 Avi_4007 Agrobacterium vitis S4 hypothetical protein YP_002550905.1 3374683 D 311402 CDS YP_002550906.1 222149949 7387341 3375011..3375589 1 NC_011989.1 hypothetical protein 3375589 7387341 Avi_4008 Agrobacterium vitis S4 hypothetical protein YP_002550906.1 3375011 D 311402 CDS YP_002550907.1 222149950 7387342 3375990..3376739 1 NC_011989.1 electron transfer flavoprotein beta subunit 3376739 etfB 7387342 etfB Agrobacterium vitis S4 electron transfer flavoprotein beta subunit YP_002550907.1 3375990 D 311402 CDS YP_002550908.1 222149951 7387343 3376764..3377693 1 NC_011989.1 electron transfer flavoprotein alpha subunit 3377693 etfA 7387343 etfA Agrobacterium vitis S4 electron transfer flavoprotein alpha subunit YP_002550908.1 3376764 D 311402 CDS YP_002550909.1 222149952 7387344 complement(3377786..3380056) 1 NC_011989.1 methyl-accepting chemotaxis protein 3380056 mcpG 7387344 mcpG Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550909.1 3377786 R 311402 CDS YP_002550910.1 222149953 7387345 3380694..3381566 1 NC_011989.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 3381566 hbdA 7387345 hbdA Agrobacterium vitis S4 3-hydroxybutyryl-CoA dehydrogenase YP_002550910.1 3380694 D 311402 CDS YP_002550911.1 222149954 7387346 complement(3381771..3382433) 1 NC_011989.1 thiol:disulfide interchange protein 3382433 dsbE 7387346 dsbE Agrobacterium vitis S4 thiol:disulfide interchange protein YP_002550911.1 3381771 R 311402 CDS YP_002550912.1 222149955 7387347 3382458..3383861 1 NC_011989.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 3383861 argH 7387347 argH Agrobacterium vitis S4 argininosuccinate lyase YP_002550912.1 3382458 D 311402 CDS YP_002550913.1 222149956 7387348 3383956..3384147 1 NC_011989.1 hypothetical protein 3384147 7387348 Avi_4018 Agrobacterium vitis S4 hypothetical protein YP_002550913.1 3383956 D 311402 CDS YP_002550914.1 222149957 7387349 3384158..3385429 1 NC_011989.1 diaminopimelate decarboxylase 3385429 lysA 7387349 lysA Agrobacterium vitis S4 diaminopimelate decarboxylase YP_002550914.1 3384158 D 311402 CDS YP_002550915.1 222149958 7387350 3385594..3388338 1 NC_011989.1 hypothetical protein 3388338 7387350 Avi_4021 Agrobacterium vitis S4 hypothetical protein YP_002550915.1 3385594 D 311402 CDS YP_002550916.1 222149959 7387351 complement(3388446..3388805) 1 NC_011989.1 two component response regulator 3388805 7387351 Avi_4023 Agrobacterium vitis S4 two component response regulator YP_002550916.1 3388446 R 311402 CDS YP_002550917.1 222149960 7387352 complement(3389138..3389686) 1 NC_011989.1 hypoxanthine phosphoribosyltransferase 3389686 hpt 7387352 hpt Agrobacterium vitis S4 hypoxanthine phosphoribosyltransferase YP_002550917.1 3389138 R 311402 CDS YP_002550918.1 222149961 7387353 complement(3389755..3390444) 1 NC_011989.1 hypothetical protein 3390444 7387353 Avi_4026 Agrobacterium vitis S4 hypothetical protein YP_002550918.1 3389755 R 311402 CDS YP_002550919.1 222149962 7388837 3390762..3391385 1 NC_011989.1 cell division ATP-binding protein 3391385 ftsE 7388837 ftsE Agrobacterium vitis S4 cell division ATP-binding protein YP_002550919.1 3390762 D 311402 CDS YP_002550920.1 222149963 7388839 3391504..3392454 1 NC_011989.1 cell division protein 3392454 ftsX 7388839 ftsX Agrobacterium vitis S4 cell division protein YP_002550920.1 3391504 D 311402 CDS YP_002550921.1 222149964 7388840 3392498..3393238 1 NC_011989.1 hypothetical protein 3393238 7388840 Avi_4029 Agrobacterium vitis S4 hypothetical protein YP_002550921.1 3392498 D 311402 CDS YP_002550922.1 222149965 7388841 3393210..3394121 1 NC_011989.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 3394121 plsC 7388841 plsC Agrobacterium vitis S4 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002550922.1 3393210 D 311402 CDS YP_002550923.1 222149966 7388842 complement(3394116..3394655) 1 NC_011989.1 transporter 3394655 7388842 Avi_4031 Agrobacterium vitis S4 transporter YP_002550923.1 3394116 R 311402 CDS YP_002550924.1 222149967 7388843 3394834..3395841 1 NC_011989.1 hypothetical protein 3395841 7388843 Avi_4032 Agrobacterium vitis S4 hypothetical protein YP_002550924.1 3394834 D 311402 CDS YP_002550925.1 222149968 7388844 complement(3395858..3396793) 1 NC_011989.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 3396793 tyrC 7388844 tyrC Agrobacterium vitis S4 cyclohexadienyl dehydrogenase YP_002550925.1 3395858 R 311402 CDS YP_002550926.1 222149969 7388845 complement(3396793..3397887) 1 NC_011989.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3397887 hisC 7388845 hisC Agrobacterium vitis S4 histidinol-phosphate aminotransferase YP_002550926.1 3396793 R 311402 CDS YP_002550927.1 222149970 7388846 complement(3397971..3398732) 1 NC_011989.1 hypothetical protein 3398732 7388846 Avi_4035 Agrobacterium vitis S4 hypothetical protein YP_002550927.1 3397971 R 311402 CDS YP_002550928.1 222149971 7388847 3398836..3399606 1 NC_011989.1 glyoxalase II 3399606 gloB 7388847 gloB Agrobacterium vitis S4 glyoxalase II YP_002550928.1 3398836 D 311402 CDS YP_002550929.1 222149972 7388848 3399606..3400037 1 NC_011989.1 hypothetical protein 3400037 7388848 Avi_4037 Agrobacterium vitis S4 hypothetical protein YP_002550929.1 3399606 D 311402 CDS YP_002550930.1 222149973 7388849 3400142..3400708 1 NC_011989.1 cytochrome B561 protein 3400708 7388849 Avi_4038 Agrobacterium vitis S4 cytochrome B561 protein YP_002550930.1 3400142 D 311402 CDS YP_002550931.1 222149974 7388850 complement(3400712..3401596) 1 NC_011989.1 Premeases of the drub/metabolic transporter protein 3401596 7388850 Avi_4039 Agrobacterium vitis S4 Premeases of the drub/metabolic transporter protein YP_002550931.1 3400712 R 311402 CDS YP_002550932.1 222149975 7388851 complement(3401622..3402413) 1 NC_011989.1 hypothetical protein 3402413 7388851 Avi_4040 Agrobacterium vitis S4 hypothetical protein YP_002550932.1 3401622 R 311402 CDS YP_002550933.1 222149976 7388852 3402637..3402927 1 NC_011989.1 required for 70S ribosome assembly; 50S ribosomal protein L28 3402927 rpmB 7388852 rpmB Agrobacterium vitis S4 50S ribosomal protein L28 YP_002550933.1 3402637 D 311402 CDS YP_002550934.1 222149977 7388853 3403108..3403740 1 NC_011989.1 hypothetical protein 3403740 7388853 Avi_4043 Agrobacterium vitis S4 hypothetical protein YP_002550934.1 3403108 D 311402 CDS YP_002550935.1 222149978 7388854 complement(3403752..3404771) 1 NC_011989.1 hypothetical protein 3404771 7388854 Avi_4044 Agrobacterium vitis S4 hypothetical protein YP_002550935.1 3403752 R 311402 CDS YP_002550936.1 222149979 7388855 complement(3404768..3406669) 1 NC_011989.1 cobaltochelatase CobT subunit 3406669 cobT 7388855 cobT Agrobacterium vitis S4 cobaltochelatase CobT subunit YP_002550936.1 3404768 R 311402 CDS YP_002550937.1 222149980 7388856 complement(3406687..3407679) 1 NC_011989.1 cobaltochelatase CobS subunit 3407679 cobS 7388856 cobS Agrobacterium vitis S4 cobaltochelatase CobS subunit YP_002550937.1 3406687 R 311402 CDS YP_002550938.1 222149981 7388857 complement(3407769..3408440) 1 NC_011989.1 molecular chaperone DnaJ family 3408440 dnaJ 7388857 dnaJ Agrobacterium vitis S4 molecular chaperone DnaJ family YP_002550938.1 3407769 R 311402 CDS YP_002550939.1 222149982 7388858 3408515..3408811 1 NC_011989.1 stress induced morphogen 3408811 bolA 7388858 bolA Agrobacterium vitis S4 stress induced morphogen YP_002550939.1 3408515 D 311402 CDS YP_002550940.1 222149983 7388859 complement(3408814..3409959) 1 NC_011989.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 3409959 aroB 7388859 aroB Agrobacterium vitis S4 3-dehydroquinate synthase YP_002550940.1 3408814 R 311402 CDS YP_002550941.1 222149984 7388860 complement(3409956..3410549) 1 NC_011989.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 3410549 aroK 7388860 aroK Agrobacterium vitis S4 shikimate kinase YP_002550941.1 3409956 R 311402 CDS YP_002550942.1 222149985 7388861 3410896..3411048 1 NC_011989.1 hypothetical signal peptide protein 3411048 7388861 Avi_4054 Agrobacterium vitis S4 hypothetical signal peptide protein YP_002550942.1 3410896 D 311402 CDS YP_002550943.1 222149986 7388862 3411091..3412089 1 NC_011989.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 3412089 xerD 7388862 xerD Agrobacterium vitis S4 site-specific tyrosine recombinase XerD YP_002550943.1 3411091 D 311402 CDS YP_002550944.1 222149987 7388863 3412294..3413250 1 NC_011989.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 3413250 accA 7388863 accA Agrobacterium vitis S4 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_002550944.1 3412294 D 311402 CDS YP_002550945.1 222149988 7388864 3413603..3414940 1 NC_011989.1 hypothetical protein 3414940 7388864 Avi_4058 Agrobacterium vitis S4 hypothetical protein YP_002550945.1 3413603 D 311402 CDS YP_002550946.1 222149989 7388865 3414916..3415188 1 NC_011989.1 hypothetical protein 3415188 7388865 Avi_4059 Agrobacterium vitis S4 hypothetical protein YP_002550946.1 3414916 D 311402 CDS YP_002550947.1 222149990 7388866 complement(3415213..3416400) 1 NC_011989.1 hypothetical protein 3416400 7388866 Avi_4060 Agrobacterium vitis S4 hypothetical protein YP_002550947.1 3415213 R 311402 CDS YP_002550948.1 222149991 7388867 complement(3416536..3417636) 1 NC_011989.1 penicillin-binding protein 3417636 dac 7388867 dac Agrobacterium vitis S4 penicillin-binding protein YP_002550948.1 3416536 R 311402 CDS YP_002550949.1 222149992 7388868 3417813..3418976 1 NC_011989.1 amidohydrolase 3418976 7388868 Avi_4062 Agrobacterium vitis S4 amidohydrolase YP_002550949.1 3417813 D 311402 CDS YP_002550950.1 222149993 7387165 3419362..3420411 1 NC_011989.1 permease 3420411 7387165 Avi_4064 Agrobacterium vitis S4 permease YP_002550950.1 3419362 D 311402 CDS YP_002550951.1 222149994 7388870 complement(3420496..3421251) 1 NC_011989.1 transcriptional regulator LuxR family 3421251 agrR 7388870 agrR Agrobacterium vitis S4 transcriptional regulator LuxR family YP_002550951.1 3420496 R 311402 CDS YP_002550952.1 222149995 7388871 complement(3421387..3422133) 1 NC_011989.1 transcriptional regulator LuxR family 3422133 luxR 7388871 luxR Agrobacterium vitis S4 transcriptional regulator LuxR family YP_002550952.1 3421387 R 311402 CDS YP_002550953.1 222149996 7388872 complement(3422372..3424078) 1 NC_011989.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 3424078 fliF 7388872 fliF Agrobacterium vitis S4 flagellar MS-ring protein YP_002550953.1 3422372 R 311402 CDS YP_002550954.1 222149997 7388873 complement(3424339..3424695) 1 NC_011989.1 hypothetical protein 3424695 7388873 Avi_4070 Agrobacterium vitis S4 hypothetical protein YP_002550954.1 3424339 R 311402 CDS YP_002550955.1 222149998 7388874 complement(3425004..3425558) 1 NC_011989.1 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 3425558 cheD 7388874 cheD Agrobacterium vitis S4 chemoreceptor glutamine deamidase CheD YP_002550955.1 3425004 R 311402 CDS YP_002550956.1 222149999 7388875 complement(3425555..3425944) 1 NC_011989.1 chemotaxis receiver protein 3425944 cheY 7388875 cheY Agrobacterium vitis S4 chemotaxis receiver protein YP_002550956.1 3425555 R 311402 CDS YP_002550957.1 222150000 7388876 complement(3425944..3426981) 1 NC_011989.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 3426981 cheB 7388876 cheB Agrobacterium vitis S4 chemotaxis-specific methylesterase YP_002550957.1 3425944 R 311402 CDS YP_002550958.1 222150001 7388877 complement(3426978..3427886) 1 NC_011989.1 chemotaxis methyltransferase 3427886 cheR 7388877 cheR Agrobacterium vitis S4 chemotaxis methyltransferase YP_002550958.1 3426978 R 311402 CDS YP_002550959.1 222150002 7388878 complement(3427883..3428350) 1 NC_011989.1 chemotaxis protein 3428350 cheW 7388878 cheW Agrobacterium vitis S4 chemotaxis protein YP_002550959.1 3427883 R 311402 CDS YP_002550960.1 222150003 7388879 complement(3428355..3430343) 1 NC_011989.1 Chemotaxis protein histidine kinase 3430343 cheA 7388879 cheA Agrobacterium vitis S4 Chemotaxis protein histidine kinase YP_002550960.1 3428355 R 311402 CDS YP_002550961.1 222150004 7388880 complement(3430623..3430988) 1 NC_011989.1 chemotaxis receiver protein 3430988 cheY 7388880 cheY Agrobacterium vitis S4 chemotaxis receiver protein YP_002550961.1 3430623 R 311402 CDS YP_002550962.1 222150005 7388881 complement(3430985..3431317) 1 NC_011989.1 hypothetical protein 3431317 7388881 Avi_4080 Agrobacterium vitis S4 hypothetical protein YP_002550962.1 3430985 R 311402 CDS YP_002550963.1 222150006 7388882 complement(3431418..3433088) 1 NC_011989.1 methyl-accepting chemotaxis protein 3433088 7388882 Avi_4081 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550963.1 3431418 R 311402 CDS YP_002550964.1 222150007 7388883 3433799..3434992 1 NC_011989.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3434992 dxr 7388883 dxr Agrobacterium vitis S4 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002550964.1 3433799 D 311402 CDS YP_002550965.1 222150008 7388884 complement(3435059..3436291) 1 NC_011989.1 esterase (beta-lactamase family) 3436291 7388884 Avi_4084 Agrobacterium vitis S4 esterase (beta-lactamase family) YP_002550965.1 3435059 R 311402 CDS YP_002550966.1 222150009 7388885 complement(3436369..3437583) 1 NC_011989.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 3437583 hemA 7388885 hemA Agrobacterium vitis S4 5-aminolevulinate synthase YP_002550966.1 3436369 R 311402 CDS YP_002550967.1 222150010 7388886 3438272..3438535 1 NC_011989.1 hypothetical protein 3438535 7388886 Avi_4087 Agrobacterium vitis S4 hypothetical protein YP_002550967.1 3438272 D 311402 CDS YP_002550968.1 222150011 7388887 3438803..3440665 1 NC_011989.1 hypothetical protein 3440665 7388887 Avi_4088 Agrobacterium vitis S4 hypothetical protein YP_002550968.1 3438803 D 311402 CDS YP_002550969.1 222150012 7388888 3440709..3444923 1 NC_011989.1 hypothetical protein 3444923 7388888 Avi_4089 Agrobacterium vitis S4 hypothetical protein YP_002550969.1 3440709 D 311402 CDS YP_002550970.1 222150013 7388889 3445543..3447321 1 NC_011989.1 methyl-accepting chemotaxis protein 3447321 mcpA 7388889 mcpA Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550970.1 3445543 D 311402 CDS YP_002550971.1 222150014 7388890 3447435..3447914 1 NC_011989.1 chemotaxis protein 3447914 cheW 7388890 cheW Agrobacterium vitis S4 chemotaxis protein YP_002550971.1 3447435 D 311402 CDS YP_002550972.1 222150015 7388891 complement(3448046..3449704) 1 NC_011989.1 MFS permease 3449704 7388891 Avi_4093 Agrobacterium vitis S4 MFS permease YP_002550972.1 3448046 R 311402 CDS YP_002550973.1 222150016 7388892 complement(3449985..3450257) 1 NC_011989.1 NAD-dependent formate dehydrogenase delta subunit 3450257 fdsD 7388892 fdsD Agrobacterium vitis S4 NAD-dependent formate dehydrogenase delta subunit YP_002550973.1 3449985 R 311402 CDS YP_002550974.1 222150017 7388893 complement(3450247..3451071) 1 NC_011989.1 formate dehydrogenase family accessory protein FdhD 3451071 fdhD 7388893 fdhD Agrobacterium vitis S4 formate dehydrogenase family accessory protein FdhD YP_002550974.1 3450247 R 311402 CDS YP_002550975.1 222150018 7388894 complement(3451115..3453994) 1 NC_011989.1 formate dehydrogenase, alpha subunit 3453994 fdhA 7388894 fdhA Agrobacterium vitis S4 formate dehydrogenase, alpha subunit YP_002550975.1 3451115 R 311402 CDS YP_002550976.1 222150019 7388895 complement(3454000..3455556) 1 NC_011989.1 NADH dehydrogenase I chain F 3455556 nuoF 7388895 nuoF Agrobacterium vitis S4 NADH dehydrogenase I chain F YP_002550976.1 3454000 R 311402 CDS YP_002550977.1 222150020 7388896 complement(3455565..3456044) 1 NC_011989.1 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 3456044 nuoE 7388896 nuoE Agrobacterium vitis S4 formate dehydrogenase subunit gamma YP_002550977.1 3455565 R 311402 CDS YP_002550978.1 222150021 7388897 complement(3456137..3457072) 1 NC_011989.1 LysR family transcriptional regulator 3457072 7388897 Avi_4101 Agrobacterium vitis S4 LysR family transcriptional regulator YP_002550978.1 3456137 R 311402 CDS YP_002550979.1 222150022 7388898 complement(3457150..3457422) 1 NC_011989.1 transcriptional regulator ArsR family 3457422 7388898 Avi_4102 Agrobacterium vitis S4 transcriptional regulator ArsR family YP_002550979.1 3457150 R 311402 CDS YP_002550980.1 222150023 7388899 complement(3457595..3458527) 1 NC_011989.1 lactate dehydrogenase 3458527 mdh 7388899 mdh Agrobacterium vitis S4 lactate dehydrogenase YP_002550980.1 3457595 R 311402 CDS YP_002550981.1 222150024 7388900 complement(3459350..3459757) 1 NC_011989.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 3459757 atpC 7388900 atpC Agrobacterium vitis S4 F0F1 ATP synthase subunit epsilon YP_002550981.1 3459350 R 311402 CDS YP_002550982.1 222150025 7388901 complement(3459826..3461283) 1 NC_011989.1 ATP synthase F1, beta subunit 3461283 atpD 7388901 atpD Agrobacterium vitis S4 ATP synthase F1, beta subunit YP_002550982.1 3459826 R 311402 CDS YP_002550983.1 222150026 7388902 complement(3461308..3462189) 1 NC_011989.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 3462189 atpG 7388902 atpG Agrobacterium vitis S4 F0F1 ATP synthase subunit gamma YP_002550983.1 3461308 R 311402 CDS YP_002550984.1 222150027 7388903 complement(3462220..3463746) 1 NC_011989.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 3463746 atpA 7388903 atpA Agrobacterium vitis S4 F0F1 ATP synthase subunit alpha YP_002550984.1 3462220 R 311402 CDS YP_002550985.1 222150028 7388904 complement(3463746..3464327) 1 NC_011989.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 3464327 atpH 7388904 atpH Agrobacterium vitis S4 F0F1 ATP synthase subunit delta YP_002550985.1 3463746 R 311402 CDS YP_002550986.1 222150029 7388905 complement(3464579..3464974) 1 NC_011989.1 hypothetical protein 3464974 7388905 Avi_4111 Agrobacterium vitis S4 hypothetical protein YP_002550986.1 3464579 R 311402 CDS YP_002550987.1 222150030 7388906 complement(3465167..3467386) 1 NC_011989.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 3467386 priA 7388906 priA Agrobacterium vitis S4 primosome assembly protein PriA YP_002550987.1 3465167 R 311402 CDS YP_002550988.1 222150031 7388907 complement(3467486..3469822) 1 NC_011989.1 methyl-accepting chemotaxis protein 3469822 7388907 Avi_4113 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002550988.1 3467486 R 311402 CDS YP_002550989.1 222150032 7388908 3470135..3471103 1 NC_011989.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3471103 xerC 7388908 xerC Agrobacterium vitis S4 site-specific tyrosine recombinase XerC YP_002550989.1 3470135 D 311402 CDS YP_002550990.1 222150033 7388909 3471198..3472313 1 NC_011989.1 hypothetical protein 3472313 7388909 Avi_4115 Agrobacterium vitis S4 hypothetical protein YP_002550990.1 3471198 D 311402 CDS YP_002550991.1 222150034 7388910 complement(3472463..3473869) 1 NC_011989.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3473869 lpdA 7388910 lpdA Agrobacterium vitis S4 dihydrolipoamide dehydrogenase YP_002550991.1 3472463 R 311402 CDS YP_002550992.1 222150035 7388911 complement(3473979..3474620) 1 NC_011989.1 RhtB family transporter 3474620 rhtB 7388911 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002550992.1 3473979 R 311402 CDS YP_002550993.1 222150036 7388912 complement(3474654..3475073) 1 NC_011989.1 hypothetical protein 3475073 7388912 Avi_4119 Agrobacterium vitis S4 hypothetical protein YP_002550993.1 3474654 R 311402 CDS YP_002550994.1 222150037 7388913 complement(3475181..3476413) 1 NC_011989.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 3476413 sucB 7388913 sucB Agrobacterium vitis S4 dihydrolipoamide succinyltransferase YP_002550994.1 3475181 R 311402 CDS YP_002550995.1 222150038 7388914 complement(3476471..3479467) 1 NC_011989.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 3479467 sucA 7388914 sucA Agrobacterium vitis S4 2-oxoglutarate dehydrogenase E1 component YP_002550995.1 3476471 R 311402 CDS YP_002550996.1 222150039 7388915 complement(3479640..3480542) 1 NC_011989.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 3480542 sucD 7388915 sucD Agrobacterium vitis S4 succinyl-CoA synthetase subunit alpha YP_002550996.1 3479640 R 311402 CDS YP_002550997.1 222150040 7388916 complement(3480542..3480922) 1 NC_011989.1 hypothetical protein 3480922 7388916 Avi_4126 Agrobacterium vitis S4 hypothetical protein YP_002550997.1 3480542 R 311402 CDS YP_002550998.1 222150041 7388917 complement(3480927..3482123) 1 NC_011989.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 3482123 sucC 7388917 sucC Agrobacterium vitis S4 succinyl-CoA synthetase subunit beta YP_002550998.1 3480927 R 311402 CDS YP_002550999.1 222150042 7388918 complement(3482247..3483209) 1 NC_011989.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 3483209 mdh 7388918 mdh Agrobacterium vitis S4 malate dehydrogenase YP_002550999.1 3482247 R 311402 CDS YP_002551000.1 222150043 7388919 complement(3483389..3484552) 1 NC_011989.1 hypothetical protein 3484552 7388919 Avi_4130 Agrobacterium vitis S4 hypothetical protein YP_002551000.1 3483389 R 311402 CDS YP_002551001.1 222150044 7388920 complement(3484636..3485148) 1 NC_011989.1 hypothetical protein 3485148 7388920 Avi_4132 Agrobacterium vitis S4 hypothetical protein YP_002551001.1 3484636 R 311402 CDS YP_002551002.1 222150045 7388672 complement(3485539..3486318) 1 NC_011989.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 3486318 sdhB 7388672 sdhB Agrobacterium vitis S4 succinate dehydrogenase iron-sulfur subunit YP_002551002.1 3485539 R 311402 CDS YP_002551003.1 222150046 7386912 complement(3486334..3488190) 1 NC_011989.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3488190 sdhA 7386912 sdhA Agrobacterium vitis S4 succinate dehydrogenase flavoprotein subunit YP_002551003.1 3486334 R 311402 CDS YP_002551004.1 222150047 7386913 complement(3488197..3488577) 1 NC_011989.1 succinate dehydrogenase hydrophobic membrane anchor 3488577 sdhD 7386913 sdhD Agrobacterium vitis S4 succinate dehydrogenase hydrophobic membrane anchor YP_002551004.1 3488197 R 311402 CDS YP_002551005.1 222150048 7386914 complement(3488590..3488982) 1 NC_011989.1 succinate dehydrogenase cytochrome B-556 subunit 3488982 sdhC 7386914 sdhC Agrobacterium vitis S4 succinate dehydrogenase cytochrome B-556 subunit YP_002551005.1 3488590 R 311402 CDS YP_002551006.1 222150049 7386915 3489277..3489636 1 NC_011989.1 hypothetical protein 3489636 7386915 Avi_4138 Agrobacterium vitis S4 hypothetical protein YP_002551006.1 3489277 D 311402 CDS YP_002551007.1 222150050 7386916 complement(3489651..3490310) 1 NC_011989.1 hypothetical protein 3490310 7386916 Avi_4139 Agrobacterium vitis S4 hypothetical protein YP_002551007.1 3489651 R 311402 CDS YP_002551008.1 222150051 7386917 complement(3490307..3490738) 1 NC_011989.1 hypothetical protein 3490738 7386917 Avi_4141 Agrobacterium vitis S4 hypothetical protein YP_002551008.1 3490307 R 311402 CDS YP_002551009.1 222150052 7386918 complement(3490744..3491037) 1 NC_011989.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 3491037 7386918 Avi_4142 Agrobacterium vitis S4 YciI-like protein YP_002551009.1 3490744 R 311402 CDS YP_002551010.1 222150053 7386919 complement(3491056..3492045) 1 NC_011989.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3492045 gpsA 7386919 gpsA Agrobacterium vitis S4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002551010.1 3491056 R 311402 CDS YP_002551011.1 222150054 7386920 complement(3492042..3493139) 1 NC_011989.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 3493139 gcp 7386920 gcp Agrobacterium vitis S4 putative DNA-binding/iron metalloprotein/AP endonuclease YP_002551011.1 3492042 R 311402 CDS YP_002551012.1 222150055 7386921 3493225..3494154 1 NC_011989.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 3494154 hemC 7386921 hemC Agrobacterium vitis S4 porphobilinogen deaminase YP_002551012.1 3493225 D 311402 CDS YP_002551013.1 222150056 7386922 3494159..3494875 1 NC_011989.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; uroporphyrinogen-III synthase 3494875 7386922 Avi_4146 Agrobacterium vitis S4 uroporphyrinogen-III synthase YP_002551013.1 3494159 D 311402 CDS YP_002551014.1 222150057 7386923 3494970..3496355 1 NC_011989.1 hypothetical protein 3496355 7386923 Avi_4147 Agrobacterium vitis S4 hypothetical protein YP_002551014.1 3494970 D 311402 CDS YP_002551015.1 222150058 7386924 3496361..3497941 1 NC_011989.1 hypothetical protein 3497941 7386924 Avi_4148 Agrobacterium vitis S4 hypothetical protein YP_002551015.1 3496361 D 311402 CDS YP_002551016.1 222150059 7386925 3497951..3498460 1 NC_011989.1 hypothetical protein 3498460 7386925 Avi_4149 Agrobacterium vitis S4 hypothetical protein YP_002551016.1 3497951 D 311402 CDS YP_002551017.1 222150060 7386926 3498453..3499217 1 NC_011989.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 3499217 guaA 7386926 guaA Agrobacterium vitis S4 glutamine amidotransferase YP_002551017.1 3498453 D 311402 CDS YP_002551018.1 222150061 7386927 complement(3499224..3500456) 1 NC_011989.1 MFS permease 3500456 7386927 Avi_4151 Agrobacterium vitis S4 MFS permease YP_002551018.1 3499224 R 311402 CDS YP_002551019.1 222150062 7386928 3500594..3500884 1 NC_011989.1 hypothetical protein 3500884 7386928 Avi_4152 Agrobacterium vitis S4 hypothetical protein YP_002551019.1 3500594 D 311402 CDS YP_002551020.1 222150063 7386929 3500881..3501195 1 NC_011989.1 hypothetical protein 3501195 7386929 Avi_4153 Agrobacterium vitis S4 hypothetical protein YP_002551020.1 3500881 D 311402 CDS YP_002551021.1 222150064 7386930 complement(3501202..3501735) 1 NC_011989.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 3501735 ppa 7386930 ppa Agrobacterium vitis S4 inorganic pyrophosphatase YP_002551021.1 3501202 R 311402 CDS YP_002551022.1 222150065 7386931 complement(3501870..3502376) 1 NC_011989.1 acetyltransferase 3502376 7386931 Avi_4155 Agrobacterium vitis S4 acetyltransferase YP_002551022.1 3501870 R 311402 CDS YP_002551023.1 222150066 7386932 complement(3502624..3504489) 1 NC_011989.1 GTP-binding tyrosin phosphorylated protein 3504489 typA 7386932 typA Agrobacterium vitis S4 GTP-binding tyrosin phosphorylated protein YP_002551023.1 3502624 R 311402 CDS YP_002551024.1 222150067 7386933 complement(3504613..3506193) 1 NC_011989.1 secreted alkaline phosphatase 3506193 7386933 Avi_4157 Agrobacterium vitis S4 secreted alkaline phosphatase YP_002551024.1 3504613 R 311402 CDS YP_002551025.1 222150068 7386934 complement(3506323..3508407) 1 NC_011989.1 peptidyl-dipeptidase 3508407 dcp 7386934 dcp Agrobacterium vitis S4 peptidyl-dipeptidase YP_002551025.1 3506323 R 311402 CDS YP_002551026.1 222150069 7386935 3508655..3509833 1 NC_011989.1 MFS permease 3509833 7386935 Avi_4159 Agrobacterium vitis S4 MFS permease YP_002551026.1 3508655 D 311402 CDS YP_002551027.1 222150070 7386936 complement(3509880..3511109) 1 NC_011989.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 3511109 argG 7386936 argG Agrobacterium vitis S4 argininosuccinate synthase YP_002551027.1 3509880 R 311402 CDS YP_002551028.1 222150071 7386937 3511433..3512287 1 NC_011989.1 oxidoreductase 3512287 7386937 Avi_4162 Agrobacterium vitis S4 oxidoreductase YP_002551028.1 3511433 D 311402 CDS YP_002551029.1 222150072 7386938 3512425..3513240 1 NC_011989.1 hypothetical protein 3513240 7386938 Avi_4163 Agrobacterium vitis S4 hypothetical protein YP_002551029.1 3512425 D 311402 CDS YP_002551030.1 222150073 7386939 3513322..3513963 1 NC_011989.1 RhtB family transporter 3513963 rhtB 7386939 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002551030.1 3513322 D 311402 CDS YP_002551031.1 222150074 7386940 complement(3514095..3514319) 1 NC_011989.1 Amino acid transporter protein 3514319 7386940 Avi_4167 Agrobacterium vitis S4 Amino acid transporter protein YP_002551031.1 3514095 R 311402 CDS YP_002551032.1 222150075 7386941 complement(3514334..3515566) 1 NC_011989.1 Fe-S-cluster redox protein 3515566 7386941 Avi_4168 Agrobacterium vitis S4 Fe-S-cluster redox protein YP_002551032.1 3514334 R 311402 CDS YP_002551033.1 222150076 7386942 complement(3515811..3516320) 1 NC_011989.1 hypothetical protein 3516320 7386942 Avi_4170 Agrobacterium vitis S4 hypothetical protein YP_002551033.1 3515811 R 311402 CDS YP_002551034.1 222150077 7386943 complement(3516602..3517042) 1 NC_011989.1 hypothetical protein 3517042 7386943 Avi_4172 Agrobacterium vitis S4 hypothetical protein YP_002551034.1 3516602 R 311402 CDS YP_002551035.1 222150078 7386944 complement(3517110..3517412) 1 NC_011989.1 4a-hydroxytetrahydrobiopterin dehydratase 3517412 7386944 Avi_4174 Agrobacterium vitis S4 4a-hydroxytetrahydrobiopterin dehydratase YP_002551035.1 3517110 R 311402 CDS YP_002551036.1 222150079 7386945 complement(3517528..3518115) 1 NC_011989.1 2'-5' RNA ligase 3518115 7386945 Avi_4176 Agrobacterium vitis S4 2'-5' RNA ligase YP_002551036.1 3517528 R 311402 CDS YP_002551037.1 222150080 7386946 complement(3518182..3518949) 1 NC_011989.1 esterase 3518949 7386946 Avi_4178 Agrobacterium vitis S4 esterase YP_002551037.1 3518182 R 311402 CDS YP_002551038.1 222150081 7386947 3519126..3519761 1 NC_011989.1 ABC transporter ATPase 3519761 7386947 Avi_4180 Agrobacterium vitis S4 ABC transporter ATPase YP_002551038.1 3519126 D 311402 CDS YP_002551039.1 222150082 7386948 3519758..3522304 1 NC_011989.1 hypothetical protein 3522304 7386948 Avi_4181 Agrobacterium vitis S4 hypothetical protein YP_002551039.1 3519758 D 311402 CDS YP_002551040.1 222150083 7386949 3522493..3523263 1 NC_011989.1 hypothetical protein 3523263 7386949 Avi_4182 Agrobacterium vitis S4 hypothetical protein YP_002551040.1 3522493 D 311402 CDS YP_002551041.1 222150084 7386950 3523318..3523947 1 NC_011989.1 acetyltransferase 3523947 7386950 Avi_4184 Agrobacterium vitis S4 acetyltransferase YP_002551041.1 3523318 D 311402 CDS YP_002551042.1 222150085 7386951 complement(3523955..3524374) 1 NC_011989.1 hypothetical protein 3524374 7386951 Avi_4185 Agrobacterium vitis S4 hypothetical protein YP_002551042.1 3523955 R 311402 CDS YP_002551043.1 222150086 7386952 complement(3524705..3525493) 1 NC_011989.1 hypothetical protein 3525493 7386952 Avi_4186 Agrobacterium vitis S4 hypothetical protein YP_002551043.1 3524705 R 311402 CDS YP_002551044.1 222150087 7386953 complement(3525898..3528591) 1 NC_011989.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 3528591 acnA 7386953 acnA Agrobacterium vitis S4 aconitate hydratase YP_002551044.1 3525898 R 311402 CDS YP_002551045.1 222150088 7386954 3528843..3529508 1 NC_011989.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 3529508 ccmA 7386954 ccmA Agrobacterium vitis S4 cytochrome c biogenesis protein CcmA YP_002551045.1 3528843 D 311402 CDS YP_002551046.1 222150089 7386955 3529505..3530164 1 NC_011989.1 heme exporter protein CcmB 3530164 ccmB 7386955 ccmB Agrobacterium vitis S4 heme exporter protein CcmB YP_002551046.1 3529505 D 311402 CDS YP_002551047.1 222150090 7386956 3530233..3531015 1 NC_011989.1 heme ABC transporter permease 3531015 ccmC 7386956 ccmC Agrobacterium vitis S4 heme ABC transporter permease YP_002551047.1 3530233 D 311402 CDS YP_002551048.1 222150091 7386957 3531012..3531182 1 NC_011989.1 hypothetical protein 3531182 7386957 Avi_4192 Agrobacterium vitis S4 hypothetical protein YP_002551048.1 3531012 D 311402 CDS YP_002551049.1 222150092 7386958 3531182..3531808 1 NC_011989.1 thiol:disulfide interchange protein 3531808 ccmG 7386958 ccmG Agrobacterium vitis S4 thiol:disulfide interchange protein YP_002551049.1 3531182 D 311402 CDS YP_002551050.1 222150093 7386959 complement(3531783..3532373) 1 NC_011989.1 hypothetical protein 3532373 7386959 Avi_4194 Agrobacterium vitis S4 hypothetical protein YP_002551050.1 3531783 R 311402 CDS YP_002551051.1 222150094 7386960 complement(3532370..3533020) 1 NC_011989.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 3533020 ispZ 7386960 ispZ Agrobacterium vitis S4 intracellular septation protein A YP_002551051.1 3532370 R 311402 CDS YP_002551052.1 222150095 7386961 complement(3533094..3534458) 1 NC_011989.1 cell division particle 3534458 fstY 7386961 fstY Agrobacterium vitis S4 cell division particle YP_002551052.1 3533094 R 311402 CDS YP_002551053.1 222150096 7386962 complement(3534481..3535755) 1 NC_011989.1 hypothetical protein 3535755 7386962 Avi_4197 Agrobacterium vitis S4 hypothetical protein YP_002551053.1 3534481 R 311402 CDS YP_002551054.1 222150097 7386963 complement(3535752..3536663) 1 NC_011989.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 3536663 dapF 7386963 dapF Agrobacterium vitis S4 diaminopimelate epimerase YP_002551054.1 3535752 R 311402 CDS YP_002551055.1 222150098 7386964 complement(3536735..3537730) 1 NC_011989.1 hypothetical protein 3537730 7386964 Avi_4200 Agrobacterium vitis S4 hypothetical protein YP_002551055.1 3536735 R 311402 CDS YP_002551056.1 222150099 7386965 complement(3537791..3538441) 1 NC_011989.1 hypothetical protein 3538441 7386965 Avi_4202 Agrobacterium vitis S4 hypothetical protein YP_002551056.1 3537791 R 311402 CDS YP_002551057.1 222150100 7386966 3538680..3540260 1 NC_011989.1 signal recognition particle protein 3540260 ffh 7386966 ffh Agrobacterium vitis S4 signal recognition particle protein YP_002551057.1 3538680 D 311402 CDS YP_002551058.1 222150101 7386967 3540273..3540605 1 NC_011989.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 3540605 tyrA 7386967 tyrA Agrobacterium vitis S4 chorismate mutase YP_002551058.1 3540273 D 311402 CDS YP_002551059.1 222150102 7386968 3540670..3541041 1 NC_011989.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3541041 rpsP 7386968 rpsP Agrobacterium vitis S4 30S ribosomal protein S16 YP_002551059.1 3540670 D 311402 CDS YP_002551060.1 222150103 7386969 3541073..3541738 1 NC_011989.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3541738 rimM 7386969 rimM Agrobacterium vitis S4 16S rRNA-processing protein RimM YP_002551060.1 3541073 D 311402 CDS YP_002551061.1 222150104 7386970 3541710..3542459 1 NC_011989.1 tRNA (guanine-N1)-methyltransferase 3542459 trmD 7386970 trmD Agrobacterium vitis S4 tRNA (guanine-N1)-methyltransferase YP_002551061.1 3541710 D 311402 CDS YP_002551062.1 222150105 7386971 complement(3542441..3543184) 1 NC_011989.1 hypothetical protein 3543184 7386971 Avi_4209 Agrobacterium vitis S4 hypothetical protein YP_002551062.1 3542441 R 311402 CDS YP_002551063.1 222150106 7386972 3543459..3544001 1 NC_011989.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3544001 rplS 7386972 rplS Agrobacterium vitis S4 50S ribosomal protein L19 YP_002551063.1 3543459 D 311402 CDS YP_002551064.1 222150107 7386973 3544225..3544629 1 NC_011989.1 hypothetical protein 3544629 7386973 Avi_4212 Agrobacterium vitis S4 hypothetical protein YP_002551064.1 3544225 D 311402 CDS YP_002551065.1 222150108 7386974 3544867..3546279 1 NC_011989.1 integral membrane protein 3546279 7386974 Avi_4213 Agrobacterium vitis S4 integral membrane protein YP_002551065.1 3544867 D 311402 CDS YP_002551066.1 222150109 7386975 3546344..3546721 1 NC_011989.1 Cu resistance protein 3546721 7386975 Avi_4214 Agrobacterium vitis S4 Cu resistance protein YP_002551066.1 3546344 D 311402 CDS YP_002551067.1 222150110 7386976 3546718..3547596 1 NC_011989.1 Cu resistance protein 3547596 7386976 Avi_4216 Agrobacterium vitis S4 Cu resistance protein YP_002551067.1 3546718 D 311402 CDS YP_002551068.1 222150111 7386977 3547701..3548498 1 NC_011989.1 ABC type amino acid transport system periplasmic component protein 3548498 7386977 Avi_4217 Agrobacterium vitis S4 ABC type amino acid transport system periplasmic component protein YP_002551068.1 3547701 D 311402 CDS YP_002551069.1 222150112 7386978 3548516..3549340 1 NC_011989.1 amino acid ABC transporter permease 3549340 7386978 Avi_4218 Agrobacterium vitis S4 amino acid ABC transporter permease YP_002551069.1 3548516 D 311402 CDS YP_002551070.1 222150113 7386979 3550480..3552264 1 NC_011989.1 glycosyltransferase TPR domain-containing protein 3552264 7386979 Avi_4222 Agrobacterium vitis S4 glycosyltransferase TPR domain-containing protein YP_002551070.1 3550480 D 311402 CDS YP_002551071.1 222150114 7386980 3552573..3553982 1 NC_011989.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 3553982 leuC 7386980 leuC Agrobacterium vitis S4 isopropylmalate isomerase large subunit YP_002551071.1 3552573 D 311402 CDS YP_002551072.1 222150115 7386981 complement(3554059..3554889) 1 NC_011989.1 oxidoreductase 3554889 yafB 7386981 yafB Agrobacterium vitis S4 oxidoreductase YP_002551072.1 3554059 R 311402 CDS YP_002551073.1 222150116 7386982 complement(3555044..3555604) 1 NC_011989.1 hypothetical protein 3555604 7386982 Avi_4226 Agrobacterium vitis S4 hypothetical protein YP_002551073.1 3555044 R 311402 CDS YP_002551074.1 222150117 7386983 3555724..3556407 1 NC_011989.1 two component response regulator 3556407 mtrA 7386983 mtrA Agrobacterium vitis S4 two component response regulator YP_002551074.1 3555724 D 311402 CDS YP_002551075.1 222150118 7386984 3556445..3556900 1 NC_011989.1 hypothetical protein 3556900 7386984 Avi_4229 Agrobacterium vitis S4 hypothetical protein YP_002551075.1 3556445 D 311402 CDS YP_002551076.1 222150119 7386985 complement(3557221..3558129) 1 NC_011989.1 nucleotidyltransferase 3558129 7386985 Avi_4231 Agrobacterium vitis S4 nucleotidyltransferase YP_002551076.1 3557221 R 311402 CDS YP_002551077.1 222150120 7386986 complement(3558158..3558961) 1 NC_011989.1 exodeoxyribonuclease III 3558961 xth 7386986 xth Agrobacterium vitis S4 exodeoxyribonuclease III YP_002551077.1 3558158 R 311402 CDS YP_002551078.1 222150121 7386987 complement(3559096..3559758) 1 NC_011989.1 lolA type protein 3559758 7386987 Avi_4235 Agrobacterium vitis S4 lolA type protein YP_002551078.1 3559096 R 311402 CDS YP_002551079.1 222150122 7386988 complement(3559879..3562521) 1 NC_011989.1 ftsK cell division protein 3562521 7386988 Avi_4236 Agrobacterium vitis S4 ftsK cell division protein YP_002551079.1 3559879 R 311402 CDS YP_002551080.1 222150123 7386989 complement(3562812..3564170) 1 NC_011989.1 ammonium transporter 3564170 amt 7386989 amt Agrobacterium vitis S4 ammonium transporter YP_002551080.1 3562812 R 311402 CDS YP_002551081.1 222150124 7386990 complement(3564199..3564549) 1 NC_011989.1 nitrogen regulatory protein PII 3564549 glnK 7386990 glnK Agrobacterium vitis S4 nitrogen regulatory protein PII YP_002551081.1 3564199 R 311402 CDS YP_002551082.1 222150125 7386991 complement(3564768..3565652) 1 NC_011989.1 acyl-CoA thioesterase II 3565652 tesB 7386991 tesB Agrobacterium vitis S4 acyl-CoA thioesterase II YP_002551082.1 3564768 R 311402 CDS YP_002551083.1 222150126 7386992 3565817..3566953 1 NC_011989.1 2-octaprenyl-6-methoxyphenyl hydroxylase 3566953 7386992 Avi_4242 Agrobacterium vitis S4 2-octaprenyl-6-methoxyphenyl hydroxylase YP_002551083.1 3565817 D 311402 CDS YP_002551084.1 222150127 7386993 complement(3567004..3567192) 1 NC_011989.1 hypothetical protein 3567192 7386993 Avi_4243 Agrobacterium vitis S4 hypothetical protein YP_002551084.1 3567004 R 311402 CDS YP_002551085.1 222150128 7386498 complement(3567226..3567900) 1 NC_011989.1 ATP-dependent protease LA 2 3567900 lonD 7386498 lonD Agrobacterium vitis S4 ATP-dependent protease LA 2 YP_002551085.1 3567226 R 311402 CDS YP_002551086.1 222150129 7386499 complement(3568078..3569082) 1 NC_011989.1 thioredoxin 3569082 trx 7386499 trx Agrobacterium vitis S4 thioredoxin YP_002551086.1 3568078 R 311402 CDS YP_002551087.1 222150130 7386500 complement(3569261..3569770) 1 NC_011989.1 hypothetical protein 3569770 7386500 Avi_4247 Agrobacterium vitis S4 hypothetical protein YP_002551087.1 3569261 R 311402 CDS YP_002551088.1 222150131 7387166 complement(3570337..3571632) 1 NC_011989.1 MFS permease 3571632 7387166 Avi_4248 Agrobacterium vitis S4 MFS permease YP_002551088.1 3570337 R 311402 CDS YP_002551089.1 222150132 7386502 complement(3571733..3572794) 1 NC_011989.1 aldose 1-epimerase 3572794 galM 7386502 galM Agrobacterium vitis S4 aldose 1-epimerase YP_002551089.1 3571733 R 311402 CDS YP_002551090.1 222150133 7386503 complement(3572921..3574108) 1 NC_011989.1 hypothetical protein 3574108 7386503 Avi_4250 Agrobacterium vitis S4 hypothetical protein YP_002551090.1 3572921 R 311402 CDS YP_002551091.1 222150134 7386504 complement(3574115..3574567) 1 NC_011989.1 Histone acetyl transferase 3574567 7386504 Avi_4251 Agrobacterium vitis S4 Histone acetyl transferase YP_002551091.1 3574115 R 311402 CDS YP_002551092.1 222150135 7386505 complement(3574564..3575493) 1 NC_011989.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 3575493 metA 7386505 metA Agrobacterium vitis S4 homoserine O-succinyltransferase YP_002551092.1 3574564 R 311402 CDS YP_002551093.1 222150136 7386506 complement(3575701..3576567) 1 NC_011989.1 ATPase 3576567 7386506 Avi_4254 Agrobacterium vitis S4 ATPase YP_002551093.1 3575701 R 311402 CDS YP_002551094.1 222150137 7386507 3577050..3577319 1 NC_011989.1 cold shock protein 3577319 7386507 Avi_4257 Agrobacterium vitis S4 cold shock protein YP_002551094.1 3577050 D 311402 CDS YP_002551095.1 222150138 7386508 3577355..3577603 1 NC_011989.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3577603 rpsU 7386508 rpsU Agrobacterium vitis S4 30S ribosomal protein S21 YP_002551095.1 3577355 D 311402 CDS YP_002551096.1 222150139 7386509 3577783..3578442 1 NC_011989.1 thiamine pyrophosphokinase 3578442 7386509 Avi_4260 Agrobacterium vitis S4 thiamine pyrophosphokinase YP_002551096.1 3577783 D 311402 CDS YP_002551097.1 222150140 7386510 3578446..3580275 1 NC_011989.1 ABC transporter ATPase 3580275 7386510 Avi_4261 Agrobacterium vitis S4 ABC transporter ATPase YP_002551097.1 3578446 D 311402 CDS YP_002551098.1 222150141 7386511 complement(3580834..3581121) 1 NC_011989.1 hypothetical protein 3581121 7386511 Avi_4263 Agrobacterium vitis S4 hypothetical protein YP_002551098.1 3580834 R 311402 CDS YP_002551099.1 222150142 7386512 complement(3581544..3583316) 1 NC_011989.1 ABC transporter ATPase 3583316 exsE 7386512 exsE Agrobacterium vitis S4 ABC transporter ATPase YP_002551099.1 3581544 R 311402 CDS YP_002551100.1 222150143 7386513 complement(3583550..3584215) 1 NC_011989.1 hypothetical protein 3584215 7386513 Avi_4265 Agrobacterium vitis S4 hypothetical protein YP_002551100.1 3583550 R 311402 CDS YP_002551101.1 222150144 7386514 3584780..3585781 1 NC_011989.1 part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 3585781 tbpA 7386514 tbpA Agrobacterium vitis S4 thiamine transporter substrate binding subunit YP_002551101.1 3584780 D 311402 CDS YP_002551102.1 222150145 7386515 3585790..3587418 1 NC_011989.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 3587418 thiP 7386515 thiP Agrobacterium vitis S4 thiamine transporter membrane protein YP_002551102.1 3585790 D 311402 CDS YP_002551103.1 222150146 7386516 3587415..3588164 1 NC_011989.1 thiamine ABC transporter ATP-binding protein 3588164 thiQ 7386516 thiQ Agrobacterium vitis S4 thiamine ABC transporter ATP-binding protein YP_002551103.1 3587415 D 311402 CDS YP_002551104.1 222150147 7386517 3588525..3590066 1 NC_011989.1 hypothetical protein 3590066 7386517 Avi_4269 Agrobacterium vitis S4 hypothetical protein YP_002551104.1 3588525 D 311402 CDS YP_002551105.1 222150148 7386518 complement(3590202..3591059) 1 NC_011989.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; RNA polymerase factor sigma-32 3591059 rpoH2 7386518 rpoH2 Agrobacterium vitis S4 RNA polymerase factor sigma-32 YP_002551105.1 3590202 R 311402 CDS YP_002551106.1 222150149 7386519 3591544..3593475 1 NC_011989.1 molecular chaperone; heat shock protein 90 3593475 7386519 Avi_4272 Agrobacterium vitis S4 heat shock protein 90 YP_002551106.1 3591544 D 311402 CDS YP_002551107.1 222150150 7386520 complement(3593541..3594026) 1 NC_011989.1 bacterioferritin 3594026 bfr 7386520 bfr Agrobacterium vitis S4 bacterioferritin YP_002551107.1 3593541 R 311402 CDS YP_002551108.1 222150151 7386521 complement(3594473..3594814) 1 NC_011989.1 hypothetical protein 3594814 7386521 Avi_4276 Agrobacterium vitis S4 hypothetical protein YP_002551108.1 3594473 R 311402 CDS YP_002551109.1 222150152 7386522 complement(3594906..3595388) 1 NC_011989.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3595388 7386522 Avi_4277 Agrobacterium vitis S4 rRNA large subunit methyltransferase YP_002551109.1 3594906 R 311402 CDS YP_002551110.1 222150153 7386523 complement(3595552..3595965) 1 NC_011989.1 hypothetical protein 3595965 7386523 Avi_4278 Agrobacterium vitis S4 hypothetical protein YP_002551110.1 3595552 R 311402 CDS YP_002551111.1 222150154 7386524 complement(3596052..3596708) 1 NC_011989.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 3596708 nadD 7386524 nadD Agrobacterium vitis S4 nicotinic acid mononucleotide adenylyltransferase YP_002551111.1 3596052 R 311402 CDS YP_002551112.1 222150155 7386525 complement(3596683..3597966) 1 NC_011989.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3597966 proA 7386525 proA Agrobacterium vitis S4 gamma-glutamyl phosphate reductase YP_002551112.1 3596683 R 311402 CDS YP_002551113.1 222150156 7386526 complement(3597959..3599137) 1 NC_011989.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3599137 proB 7386526 proB Agrobacterium vitis S4 gamma-glutamyl kinase YP_002551113.1 3597959 R 311402 CDS YP_002551114.1 222150157 7386527 complement(3599134..3600234) 1 NC_011989.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3600234 obgE 7386527 obgE Agrobacterium vitis S4 GTPase ObgE YP_002551114.1 3599134 R 311402 CDS YP_002551115.1 222150158 7386528 3600322..3601182 1 NC_011989.1 Metal-dependent exonuclease 3601182 7386528 Avi_4283 Agrobacterium vitis S4 Metal-dependent exonuclease YP_002551115.1 3600322 D 311402 CDS YP_002551116.1 222150159 7386529 complement(3601219..3601806) 1 NC_011989.1 acetyltransferase 3601806 7386529 Avi_4284 Agrobacterium vitis S4 acetyltransferase YP_002551116.1 3601219 R 311402 CDS YP_002551117.1 222150160 7386530 complement(3601806..3602438) 1 NC_011989.1 acetyltransferase 3602438 7386530 Avi_4286 Agrobacterium vitis S4 acetyltransferase YP_002551117.1 3601806 R 311402 CDS YP_002551118.1 222150161 7386531 complement(3602566..3602838) 1 NC_011989.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 3602838 rpmA 7386531 rpmA Agrobacterium vitis S4 50S ribosomal protein L27 YP_002551118.1 3602566 R 311402 CDS YP_002551119.1 222150162 7386532 complement(3602877..3603191) 1 NC_011989.1 50S ribosomal protein L21 3603191 rplU 7386532 rplU Agrobacterium vitis S4 50S ribosomal protein L21 YP_002551119.1 3602877 R 311402 CDS YP_002551120.1 222150163 7387167 complement(3603780..3605084) 1 NC_011989.1 capsular polysaccharide biosynthesis protein 3605084 rkpJ 7387167 rkpJ Agrobacterium vitis S4 capsular polysaccharide biosynthesis protein YP_002551120.1 3603780 R 311402 CDS YP_002551121.1 222150164 7386534 3605220..3606572 1 NC_011989.1 capsular polysaccharide biosynthesis protein 3606572 7386534 Avi_4291 Agrobacterium vitis S4 capsular polysaccharide biosynthesis protein YP_002551121.1 3605220 D 311402 CDS YP_002551122.1 222150165 7386535 complement(3606692..3608251) 1 NC_011989.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3608251 purH 7386535 purH Agrobacterium vitis S4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002551122.1 3606692 R 311402 CDS YP_002551123.1 222150166 7386536 complement(3608461..3610017) 1 NC_011989.1 hypothetical protein 3610017 7386536 Avi_4294 Agrobacterium vitis S4 hypothetical protein YP_002551123.1 3608461 R 311402 CDS YP_002551124.1 222150167 7386537 complement(3610253..3611734) 1 NC_011989.1 Sun protein 3611734 sun 7386537 sun Agrobacterium vitis S4 Sun protein YP_002551124.1 3610253 R 311402 CDS YP_002551125.1 222150168 7386538 complement(3611725..3612753) 1 NC_011989.1 protease heat shock protein 3612753 htpx 7386538 htpx Agrobacterium vitis S4 protease heat shock protein YP_002551125.1 3611725 R 311402 CDS YP_002551126.1 222150169 7386539 3612863..3613093 1 NC_011989.1 hypothetical protein 3613093 7386539 Avi_4297 Agrobacterium vitis S4 hypothetical protein YP_002551126.1 3612863 D 311402 CDS YP_002551127.1 222150170 7386540 3613288..3613515 1 NC_011989.1 hypothetical protein 3613515 7386540 Avi_4298 Agrobacterium vitis S4 hypothetical protein YP_002551127.1 3613288 D 311402 CDS YP_002551128.1 222150171 7386541 3613799..3615274 1 NC_011989.1 hypothetical protein 3615274 7386541 Avi_4299 Agrobacterium vitis S4 hypothetical protein YP_002551128.1 3613799 D 311402 CDS YP_002551129.1 222150172 7386542 3615264..3616598 1 NC_011989.1 carboxy-terminal protease 3616598 7386542 Avi_4300 Agrobacterium vitis S4 carboxy-terminal protease YP_002551129.1 3615264 D 311402 CDS YP_002551130.1 222150173 7386543 3616776..3617972 1 NC_011989.1 hypothetical protein 3617972 7386543 Avi_4301 Agrobacterium vitis S4 hypothetical protein YP_002551130.1 3616776 D 311402 CDS YP_002551131.1 222150174 7386544 3618012..3618539 1 NC_011989.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3618539 ialA 7386544 ialA Agrobacterium vitis S4 dinucleoside polyphosphate hydrolase YP_002551131.1 3618012 D 311402 CDS YP_002551132.1 222150175 7386545 complement(3618546..3619304) 1 NC_011989.1 chromosome partitioning protein 3619304 parA 7386545 parA Agrobacterium vitis S4 chromosome partitioning protein YP_002551132.1 3618546 R 311402 CDS YP_002551133.1 222150176 7386546 3619550..3619909 1 NC_011989.1 hypothetical protein 3619909 7386546 Avi_4304 Agrobacterium vitis S4 hypothetical protein YP_002551133.1 3619550 D 311402 CDS YP_002551134.1 222150177 7386547 3619906..3620478 1 NC_011989.1 hypothetical protein 3620478 7386547 Avi_4305 Agrobacterium vitis S4 hypothetical protein YP_002551134.1 3619906 D 311402 CDS YP_002551135.1 222150178 7386548 3620512..3621219 1 NC_011989.1 hypothetical protein 3621219 7386548 Avi_4307 Agrobacterium vitis S4 hypothetical protein YP_002551135.1 3620512 D 311402 CDS YP_002551136.1 222150179 7386549 3621605..3622177 1 NC_011989.1 hypothetical protein 3622177 7386549 Avi_4308 Agrobacterium vitis S4 hypothetical protein YP_002551136.1 3621605 D 311402 CDS YP_002551137.1 222150180 7386550 complement(3622552..3623646) 1 NC_011989.1 protein-glutamate methylesterase 3623646 cheB 7386550 cheB Agrobacterium vitis S4 protein-glutamate methylesterase YP_002551137.1 3622552 R 311402 CDS YP_002551138.1 222150181 7386551 complement(3623654..3624535) 1 NC_011989.1 chemotaxis methyltransferase 3624535 cheR 7386551 cheR Agrobacterium vitis S4 chemotaxis methyltransferase YP_002551138.1 3623654 R 311402 CDS YP_002551139.1 222150182 7386552 complement(3624532..3625026) 1 NC_011989.1 chemotaxis protein 3625026 cheW 7386552 cheW Agrobacterium vitis S4 chemotaxis protein YP_002551139.1 3624532 R 311402 CDS YP_002551140.1 222150183 7386553 complement(3625028..3626848) 1 NC_011989.1 methyl-accepting chemotaxis protein 3626848 7386553 Avi_4312 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002551140.1 3625028 R 311402 CDS YP_002551141.1 222150184 7386554 complement(3626934..3628862) 1 NC_011989.1 methyl-accepting chemotaxis protein 3628862 7386554 Avi_4313 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002551141.1 3626934 R 311402 CDS YP_002551142.1 222150185 7386555 complement(3629016..3630710) 1 NC_011989.1 methyl-accepting chemotaxis protein 3630710 7386555 Avi_4314 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002551142.1 3629016 R 311402 CDS YP_002551143.1 222150186 7386556 complement(3630719..3631246) 1 NC_011989.1 chemotaxis protein 3631246 cheW 7386556 cheW Agrobacterium vitis S4 chemotaxis protein YP_002551143.1 3630719 R 311402 CDS YP_002551144.1 222150187 7386557 complement(3631243..3633300) 1 NC_011989.1 Chemotaxis protein histidine kinase 3633300 cheA 7386557 cheA Agrobacterium vitis S4 Chemotaxis protein histidine kinase YP_002551144.1 3631243 R 311402 CDS YP_002551145.1 222150188 7386558 complement(3633297..3633665) 1 NC_011989.1 chemotaxis receiver protein 3633665 cheY 7386558 cheY Agrobacterium vitis S4 chemotaxis receiver protein YP_002551145.1 3633297 R 311402 CDS YP_002551146.1 222150189 7386559 complement(3633670..3633996) 1 NC_011989.1 hypothetical protein 3633996 7386559 Avi_4318 Agrobacterium vitis S4 hypothetical protein YP_002551146.1 3633670 R 311402 CDS YP_002551147.1 222150190 7386560 complement(3633993..3635141) 1 NC_011989.1 Metal dependent phosphohydrolase with a response regulator receiver protein 3635141 7386560 Avi_4319 Agrobacterium vitis S4 Metal dependent phosphohydrolase with a response regulator receiver protein YP_002551147.1 3633993 R 311402 CDS YP_002551148.1 222150191 7386561 complement(3635571..3636743) 1 NC_011989.1 hypothetical protein 3636743 7386561 Avi_4321 Agrobacterium vitis S4 hypothetical protein YP_002551148.1 3635571 R 311402 CDS YP_002551149.1 222150192 7386562 complement(3636859..3640395) 1 NC_011989.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3640395 7386562 Avi_4322 Agrobacterium vitis S4 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_002551149.1 3636859 R 311402 CDS YP_002551150.1 222150193 7386563 3640712..3641182 1 NC_011989.1 transcriptional regulator AsnC family 3641182 putR 7386563 putR Agrobacterium vitis S4 transcriptional regulator AsnC family YP_002551150.1 3640712 D 311402 CDS YP_002551151.1 222150194 7386564 3641316..3641630 1 NC_011989.1 hypothetical protein 3641630 7386564 Avi_4326 Agrobacterium vitis S4 hypothetical protein YP_002551151.1 3641316 D 311402 CDS YP_002551152.1 222150195 7386565 3641776..3642375 1 NC_011989.1 hypothetical protein 3642375 7386565 Avi_4327 Agrobacterium vitis S4 hypothetical protein YP_002551152.1 3641776 D 311402 CDS YP_002551153.1 222150196 7386566 complement(3642386..3643174) 1 NC_011989.1 short chain dehydrogenase 3643174 7386566 Avi_4328 Agrobacterium vitis S4 short chain dehydrogenase YP_002551153.1 3642386 R 311402 CDS YP_002551154.1 222150197 7386567 complement(3643186..3644553) 1 NC_011989.1 Aminotransferase 3644553 7386567 Avi_4329 Agrobacterium vitis S4 Aminotransferase YP_002551154.1 3643186 R 311402 CDS YP_002551155.1 222150198 7386568 complement(3644668..3652239) 1 NC_011989.1 polyketide synthetase 3652239 7386568 Avi_4330 Agrobacterium vitis S4 polyketide synthetase YP_002551155.1 3644668 R 311402 CDS YP_002551156.1 222150199 7386569 3652769..3653923 1 NC_011989.1 MFS permease 3653923 7386569 Avi_4331 Agrobacterium vitis S4 MFS permease YP_002551156.1 3652769 D 311402 CDS YP_002551157.1 222150200 7386570 3654011..3655261 1 NC_011989.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3655261 ispG 7386570 ispG Agrobacterium vitis S4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002551157.1 3654011 D 311402 CDS YP_002551158.1 222150201 7386571 3655368..3656033 1 NC_011989.1 porin 3656033 ompA 7386571 ompA Agrobacterium vitis S4 porin YP_002551158.1 3655368 D 311402 CDS YP_002551159.1 222150202 7386572 complement(3656124..3656762) 1 NC_011989.1 RhtB family transporter 3656762 rhtB 7386572 rhtB Agrobacterium vitis S4 RhtB family transporter YP_002551159.1 3656124 R 311402 CDS YP_002551160.1 222150203 7386573 complement(3656851..3657702) 1 NC_011989.1 geranyltranstransferase 3657702 ispA 7386573 ispA Agrobacterium vitis S4 geranyltranstransferase YP_002551160.1 3656851 R 311402 CDS YP_002551161.1 222150204 7386574 3658037..3658702 1 NC_011989.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 3658702 mtgA 7386574 mtgA Agrobacterium vitis S4 monofunctional biosynthetic peptidoglycan transglycosylase YP_002551161.1 3658037 D 311402 CDS YP_002551162.1 222150205 7386575 3658776..3659435 1 NC_011989.1 glutathione S-transferase 3659435 7386575 Avi_4340 Agrobacterium vitis S4 glutathione S-transferase YP_002551162.1 3658776 D 311402 CDS YP_002551163.1 222150206 7386576 3659634..3659819 1 NC_011989.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 3659819 rpmF 7386576 rpmF Agrobacterium vitis S4 50S ribosomal protein L32 YP_002551163.1 3659634 D 311402 CDS YP_002551164.1 222150207 7386577 complement(3659979..3660554) 1 NC_011989.1 hypothetical protein 3660554 7386577 Avi_4343 Agrobacterium vitis S4 hypothetical protein YP_002551164.1 3659979 R 311402 CDS YP_002551165.1 222150208 7386578 3660749..3661975 1 NC_011989.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 3661975 phbA 7386578 phbA Agrobacterium vitis S4 acetyl-CoA acetyltransferase YP_002551165.1 3660749 D 311402 CDS YP_002551166.1 222150209 7386579 3662322..3663047 1 NC_011989.1 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis 3663047 phbB 7386579 phbB Agrobacterium vitis S4 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis YP_002551166.1 3662322 D 311402 CDS YP_002551167.1 222150210 7387926 complement(3663435..3663590) 1 NC_011989.1 hypothetical protein 3663590 7387926 Avi_4346 Agrobacterium vitis S4 hypothetical protein YP_002551167.1 3663435 R 311402 CDS YP_002551168.1 222150211 7387927 3664054..3667197 1 NC_011989.1 ATP-dependent helicase 3667197 mgpS 7387927 mgpS Agrobacterium vitis S4 ATP-dependent helicase YP_002551168.1 3664054 D 311402 CDS YP_002551169.1 222150212 7387928 3667201..3667602 1 NC_011989.1 hypothetical protein 3667602 7387928 Avi_4348 Agrobacterium vitis S4 hypothetical protein YP_002551169.1 3667201 D 311402 CDS YP_002551170.1 222150213 7387929 3667944..3668294 1 NC_011989.1 ferredoxin 3668294 fdxA 7387929 fdxA Agrobacterium vitis S4 ferredoxin YP_002551170.1 3667944 D 311402 CDS YP_002551171.1 222150214 7387930 3668926..3669597 1 NC_011989.1 transcriptional regulator CarD family 3669597 7387930 Avi_4352 Agrobacterium vitis S4 transcriptional regulator CarD family YP_002551171.1 3668926 D 311402 CDS YP_002551172.1 222150215 7387931 complement(3669834..3671561) 1 NC_011989.1 methyl-accepting chemotaxis protein 3671561 7387931 Avi_4353 Agrobacterium vitis S4 methyl-accepting chemotaxis protein YP_002551172.1 3669834 R 311402 CDS YP_002551173.1 222150216 7387932 complement(3671722..3671937) 1 NC_011989.1 hypothetical protein 3671937 7387932 Avi_4355 Agrobacterium vitis S4 hypothetical protein YP_002551173.1 3671722 R 311402 CDS YP_002551174.1 222150217 7387933 complement(3671934..3672833) 1 NC_011989.1 citrate lyase beta subunit 3672833 citE 7387933 citE Agrobacterium vitis S4 citrate lyase beta subunit YP_002551174.1 3671934 R 311402 CDS YP_002551175.1 222150218 7387934 3672945..3673196 1 NC_011989.1 hypothetical protein 3673196 7387934 Avi_4357 Agrobacterium vitis S4 hypothetical protein YP_002551175.1 3672945 D 311402 CDS YP_002551176.1 222150219 7387935 3673325..3673930 1 NC_011989.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 3673930 leuD 7387935 leuD Agrobacterium vitis S4 isopropylmalate isomerase small subunit YP_002551176.1 3673325 D 311402 CDS YP_002551177.1 222150220 7387936 3674236..3675348 1 NC_011989.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 3675348 leuB 7387936 leuB Agrobacterium vitis S4 3-isopropylmalate dehydrogenase YP_002551177.1 3674236 D 311402 CDS YP_002551178.1 222150221 7387937 3675483..3676289 1 NC_011989.1 lipid A 1-phosphatase 3676289 7387937 Avi_4360 Agrobacterium vitis S4 lipid A 1-phosphatase YP_002551178.1 3675483 D 311402 CDS YP_002551179.1 222150222 7387938 complement(3676358..3678241) 1 NC_011989.1 MFS permease 3678241 mtbA 7387938 mtbA Agrobacterium vitis S4 MFS permease YP_002551179.1 3676358 R 311402 CDS YP_002551180.1 222150223 7387939 3678740..3679774 1 NC_011989.1 aspartate-semialdehyde dehydrogenase 3679774 asd 7387939 asd Agrobacterium vitis S4 aspartate-semialdehyde dehydrogenase YP_002551180.1 3678740 D 311402 CDS YP_002551181.1 222150224 7387940 3679771..3680721 1 NC_011989.1 hypothetical protein 3680721 7387940 Avi_4364 Agrobacterium vitis S4 hypothetical protein YP_002551181.1 3679771 D 311402 CDS YP_002551182.1 222150225 7387941 3680921..3682795 1 NC_011989.1 hypothetical protein 3682795 7387941 Avi_4365 Agrobacterium vitis S4 hypothetical protein YP_002551182.1 3680921 D 311402 CDS YP_002551183.1 222150226 7387942 complement(3682909..3683550) 1 NC_011989.1 carbonate dehydratase 3683550 cah 7387942 cah Agrobacterium vitis S4 carbonate dehydratase YP_002551183.1 3682909 R 311402 CDS YP_002551184.1 222150227 7387943 complement(3683622..3684500) 1 NC_011989.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 3684500 pdxK 7387943 pdxK Agrobacterium vitis S4 pyridoxamine kinase YP_002551184.1 3683622 R 311402 CDS YP_002551185.1 222150228 7387944 3684738..3689543 1 NC_011989.1 NAD-glutamate dehydrogenase 3689543 gdh 7387944 gdh Agrobacterium vitis S4 NAD-glutamate dehydrogenase YP_002551185.1 3684738 D 311402 CDS YP_002551186.1 222150229 7387945 3689700..3691022 1 NC_011989.1 hypothetical protein 3691022 7387945 Avi_4369 Agrobacterium vitis S4 hypothetical protein YP_002551186.1 3689700 D 311402 CDS YP_002551187.1 222150230 7387946 complement(3691110..3699611) 1 NC_011989.1 beta (1-->2) glucan biosynthesis protein 3699611 chvB 7387946 chvB Agrobacterium vitis S4 beta (1-->2) glucan biosynthesis protein YP_002551187.1 3691110 R 311402 CDS YP_002551188.1 222150231 7387947 3700210..3701349 1 NC_011989.1 hippurate hydrolase 3701349 hipO 7387947 hipO Agrobacterium vitis S4 hippurate hydrolase YP_002551188.1 3700210 D 311402 CDS YP_002551189.1 222150232 7387948 complement(3701463..3703214) 1 NC_011989.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABC transporter 3703214 chvA 7387948 chvA Agrobacterium vitis S4 cyclic beta-1,2-glucan ABC transporter YP_002551189.1 3701463 R 311402 CDS YP_002551190.1 222150233 7387949 3703490..3704230 1 NC_011989.1 transcriptional regulator LuxR family 3704230 aviR 7387949 aviR Agrobacterium vitis S4 transcriptional regulator LuxR family YP_002551190.1 3703490 D 311402 CDS YP_002551191.1 222150234 7387950 3704337..3707798 1 NC_011989.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 3707798 pycA 7387950 pycA Agrobacterium vitis S4 pyruvate carboxylase YP_002551191.1 3704337 D 311402 CDS YP_002551192.1 222150235 7387951 complement(3707980..3708423) 1 NC_011989.1 hypothetical protein 3708423 7387951 Avi_4376 Agrobacterium vitis S4 hypothetical protein YP_002551192.1 3707980 R 311402 CDS YP_002551193.1 222150236 7387952 complement(3708747..3710702) 1 NC_011989.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 3710702 acs 7387952 acs Agrobacterium vitis S4 acetyl-CoA synthetase YP_002551193.1 3708747 R 311402 CDS YP_002551194.1 222150237 7387953 3710992..3711687 1 NC_011989.1 hypothetical protein 3711687 7387953 Avi_4378 Agrobacterium vitis S4 hypothetical protein YP_002551194.1 3710992 D 311402 CDS YP_002551195.1 222150238 7387954 complement(3711920..3712579) 1 NC_011989.1 hypothetical protein 3712579 7387954 Avi_4380 Agrobacterium vitis S4 hypothetical protein YP_002551195.1 3711920 R 311402 CDS YP_002551196.1 222150239 7387955 3712780..3715410 1 NC_011989.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3715410 leuS 7387955 leuS Agrobacterium vitis S4 leucyl-tRNA synthetase YP_002551196.1 3712780 D 311402 CDS YP_002551197.1 222150240 7387956 3715400..3715924 1 NC_011989.1 hypothetical protein 3715924 7387956 Avi_4382 Agrobacterium vitis S4 hypothetical protein YP_002551197.1 3715400 D 311402 CDS YP_002551198.1 222150241 7387957 3716198..3717241 1 NC_011989.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 3717241 holA 7387957 holA Agrobacterium vitis S4 DNA polymerase III subunit delta YP_002551198.1 3716198 D 311402 CDS YP_002551199.1 222150242 7387958 complement(3717340..3718218) 1 NC_011989.1 chromosome partitioning protein 3718218 parB 7387958 parB Agrobacterium vitis S4 chromosome partitioning protein YP_002551199.1 3717340 R 311402 CDS YP_002551200.1 222150243 7387959 complement(3718323..3719117) 1 NC_011989.1 chromosome partitioning protein 3719117 parA 7387959 parA Agrobacterium vitis S4 chromosome partitioning protein YP_002551200.1 3718323 R 311402 CDS YP_002551201.1 222150244 7387960 complement(3719136..3719771) 1 NC_011989.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 3719771 gidB 7387960 gidB Agrobacterium vitis S4 16S rRNA methyltransferase GidB YP_002551201.1 3719136 R 311402 CDS YP_002551202.1 222150245 7387961 complement(3719776..3721641) 1 NC_011989.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3721641 gidA 7387961 gidA Agrobacterium vitis S4 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_002551202.1 3719776 R 311402 CDS YP_002551203.1 222150246 7387962 complement(3721676..3722986) 1 NC_011989.1 tRNA modification GTPase TrmE 3722986 trmE 7387962 trmE Agrobacterium vitis S4 tRNA modification GTPase TrmE YP_002551203.1 3721676 R 311402 CDS YP_002551204.1 222150247 7387963 complement(3723135..3724400) 1 NC_011989.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3724400 rho 7387963 rho Agrobacterium vitis S4 transcription termination factor Rho YP_002551204.1 3723135 R 311402 CDS YP_002551205.1 222150248 7387964 complement(3724596..3725135) 1 NC_011989.1 hypothetical protein 3725135 7387964 Avi_4392 Agrobacterium vitis S4 hypothetical protein YP_002551205.1 3724596 R 311402 CDS YP_002551206.1 222150249 7387965 complement(3725137..3726177) 1 NC_011989.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 3726177 hemE 7387965 hemE Agrobacterium vitis S4 uroporphyrinogen decarboxylase YP_002551206.1 3725137 R 311402 CDS YP_002551383.1 222109118 7381876 279..1496 1 NC_011991.1 replication protein A 1496 repA 7381876 repA Agrobacterium vitis S4 replication protein A YP_002551383.1 279 D 311402 CDS YP_002551384.1 222109119 7381877 1493..2491 1 NC_011991.1 replication protein B 2491 repB 7381877 repB Agrobacterium vitis S4 replication protein B YP_002551384.1 1493 D 311402 CDS YP_002551385.1 222109120 7381878 2674..3903 1 NC_011991.1 replication initiation protein RepC 3903 repC 7381878 repC Agrobacterium vitis S4 replication initiation protein RepC YP_002551385.1 2674 D 311402 CDS YP_002551386.1 222109121 7381879 complement(3932..4750) 1 NC_011991.1 alpha/beta hydrolase protein 4750 7381879 Avi_9504 Agrobacterium vitis S4 alpha/beta hydrolase protein YP_002551386.1 3932 R 311402 CDS YP_002551387.1 222109122 7381880 4953..5690 1 NC_011991.1 GGDEF domain-containing protein 5690 7381880 Avi_9505 Agrobacterium vitis S4 GGDEF domain-containing protein YP_002551387.1 4953 D 311402 CDS YP_002551388.1 222109123 7381881 5858..6244 1 NC_011991.1 hypothetical protein 6244 7381881 Avi_9506 Agrobacterium vitis S4 hypothetical protein YP_002551388.1 5858 D 311402 CDS YP_002551389.1 222109124 7381882 6241..6768 1 NC_011991.1 hypothetical protein 6768 7381882 Avi_9507 Agrobacterium vitis S4 hypothetical protein YP_002551389.1 6241 D 311402 CDS YP_002551390.1 222109125 7381883 6832..7143 1 NC_011991.1 hypothetical protein 7143 7381883 Avi_9508 Agrobacterium vitis S4 hypothetical protein YP_002551390.1 6832 D 311402 CDS YP_002551391.1 222109126 7381884 complement(7190..8302) 1 NC_011991.1 phage-related integrase 8302 intX 7381884 intX Agrobacterium vitis S4 phage-related integrase YP_002551391.1 7190 R 311402 CDS YP_002551392.1 222109127 7381885 complement(8346..8765) 1 NC_011991.1 nucleic acid-binding protein 8765 7381885 Avi_9511 Agrobacterium vitis S4 nucleic acid-binding protein YP_002551392.1 8346 R 311402 CDS YP_002551393.1 222109128 7381886 9238..10335 1 NC_011991.1 hypothetical protein 10335 7381886 Avi_9513 Agrobacterium vitis S4 hypothetical protein YP_002551393.1 9238 D 311402 CDS YP_002551394.1 222109129 7381887 complement(10397..10969) 1 NC_011991.1 hypothetical protein 10969 7381887 Avi_9514 Agrobacterium vitis S4 hypothetical protein YP_002551394.1 10397 R 311402 CDS YP_002551395.1 222109130 7381888 complement(10980..11903) 1 NC_011991.1 30S ribosomal protein S2 11903 rpsB 7381888 rpsB Agrobacterium vitis S4 30S ribosomal protein S2 YP_002551395.1 10980 R 311402 CDS YP_002551396.1 222109131 7381889 12111..15983 1 NC_011991.1 hypothetical protein 15983 7381889 Avi_9517 Agrobacterium vitis S4 hypothetical protein YP_002551396.1 12111 D 311402 CDS YP_002551397.1 222109132 7381890 complement(16434..16715) 1 NC_011991.1 hypothetical protein 16715 7381890 Avi_9519 Agrobacterium vitis S4 hypothetical protein YP_002551397.1 16434 R 311402 CDS YP_002551398.1 222109133 7381891 16828..17115 1 NC_011991.1 hypothetical protein 17115 7381891 Avi_9520 Agrobacterium vitis S4 hypothetical protein YP_002551398.1 16828 D 311402 CDS YP_002551399.1 222109134 7381892 17350..18660 1 NC_011991.1 hypothetical protein 18660 7381892 Avi_9521 Agrobacterium vitis S4 hypothetical protein YP_002551399.1 17350 D 311402 CDS YP_002551400.1 222109135 7381893 18787..19353 1 NC_011991.1 hypothetical protein 19353 7381893 Avi_9522 Agrobacterium vitis S4 hypothetical protein YP_002551400.1 18787 D 311402 CDS YP_002551401.1 222109136 7381894 19826..20632 1 NC_011991.1 hypothetical protein 20632 7381894 Avi_9524 Agrobacterium vitis S4 hypothetical protein YP_002551401.1 19826 D 311402 CDS YP_002551402.1 222109137 7381895 20632..22509 1 NC_011991.1 hypothetical protein 22509 7381895 Avi_9525 Agrobacterium vitis S4 hypothetical protein YP_002551402.1 20632 D 311402 CDS YP_002551403.1 222109138 7381896 complement(22615..24360) 1 NC_011991.1 hypothetical protein 24360 7381896 Avi_9526 Agrobacterium vitis S4 hypothetical protein YP_002551403.1 22615 R 311402 CDS YP_002551404.1 222109139 7381897 complement(24544..25332) 1 NC_011991.1 hypothetical protein 25332 7381897 Avi_9527 Agrobacterium vitis S4 hypothetical protein YP_002551404.1 24544 R 311402 CDS YP_002551405.1 222109140 7381898 25510..26523 1 NC_011991.1 hypothetical protein 26523 7381898 Avi_9528 Agrobacterium vitis S4 hypothetical protein YP_002551405.1 25510 D 311402 CDS YP_002551406.1 222109141 7381899 26662..27747 1 NC_011991.1 hypothetical protein 27747 7381899 Avi_9529 Agrobacterium vitis S4 hypothetical protein YP_002551406.1 26662 D 311402 CDS YP_002551407.1 222109142 7381900 complement(28041..29846) 1 NC_011991.1 hypothetical protein 29846 7381900 Avi_9530 Agrobacterium vitis S4 hypothetical protein YP_002551407.1 28041 R 311402 CDS YP_002551408.1 222109143 7381901 complement(29843..33256) 1 NC_011991.1 helicase ATP-binding protein 33256 7381901 Avi_9531 Agrobacterium vitis S4 helicase ATP-binding protein YP_002551408.1 29843 R 311402 CDS YP_002551409.1 222109144 7381902 complement(33816..35573) 1 NC_011991.1 penicillin-binding protein 35573 pbpB2 7381902 pbpB2 Agrobacterium vitis S4 penicillin-binding protein YP_002551409.1 33816 R 311402 CDS YP_002551410.1 222109145 7381903 complement(35784..36209) 1 NC_011991.1 transcriptional regulator Cro/CI family 36209 7381903 Avi_9533 Agrobacterium vitis S4 transcriptional regulator Cro/CI family YP_002551410.1 35784 R 311402 CDS YP_002551411.1 222109146 7381904 complement(36246..36512) 1 NC_011991.1 hypothetical transcription regulator protein 36512 7381904 Avi_9535 Agrobacterium vitis S4 hypothetical transcription regulator protein YP_002551411.1 36246 R 311402 CDS YP_002551412.1 222109147 7381905 36609..36917 1 NC_011991.1 hypothetical protein 36917 7381905 Avi_9536 Agrobacterium vitis S4 hypothetical protein YP_002551412.1 36609 D 311402 CDS YP_002551413.1 222109148 7381906 36960..37943 1 NC_011991.1 hypothetical protein 37943 7381906 Avi_9537 Agrobacterium vitis S4 hypothetical protein YP_002551413.1 36960 D 311402 CDS YP_002551414.1 222109149 7381907 37940..38665 1 NC_011991.1 hypothetical protein 38665 7381907 Avi_9538 Agrobacterium vitis S4 hypothetical protein YP_002551414.1 37940 D 311402 CDS YP_002551415.1 222109150 7381908 38678..38971 1 NC_011991.1 hypothetical protein 38971 7381908 Avi_9539 Agrobacterium vitis S4 hypothetical protein YP_002551415.1 38678 D 311402 CDS YP_002551416.1 222109151 7381909 39073..44178 1 NC_011991.1 helicase SNF2 family 44178 7381909 Avi_9541 Agrobacterium vitis S4 helicase SNF2 family YP_002551416.1 39073 D 311402 CDS YP_002551417.1 222109152 7381910 complement(44261..44698) 1 NC_011991.1 hypothetical protein 44698 7381910 Avi_9542 Agrobacterium vitis S4 hypothetical protein YP_002551417.1 44261 R 311402 CDS YP_002551418.1 222109153 7381911 45192..45626 1 NC_011991.1 hypothetical protein 45626 7381911 Avi_9545 Agrobacterium vitis S4 hypothetical protein YP_002551418.1 45192 D 311402 CDS YP_002551419.1 222109154 7381912 45642..45941 1 NC_011991.1 CspA-like protein 45941 7381912 Avi_9546 Agrobacterium vitis S4 CspA-like protein YP_002551419.1 45642 D 311402 CDS YP_002551420.1 222109155 7381913 complement(46023..46520) 1 NC_011991.1 hypothetical protein 46520 7381913 Avi_9549 Agrobacterium vitis S4 hypothetical protein YP_002551420.1 46023 R 311402 CDS YP_002551421.1 222109156 7381914 complement(46526..46876) 1 NC_011991.1 hypothetical protein 46876 7381914 Avi_9550 Agrobacterium vitis S4 hypothetical protein YP_002551421.1 46526 R 311402 CDS YP_002551422.1 222109157 7381915 complement(46925..47209) 1 NC_011991.1 hypothetical protein 47209 7381915 Avi_9551 Agrobacterium vitis S4 hypothetical protein YP_002551422.1 46925 R 311402 CDS YP_002551423.1 222109158 7381916 47213..49003 1 NC_011991.1 ParB family; plasmid partitioning protein 49003 parB 7381916 parB Agrobacterium vitis S4 plasmid partitioning protein YP_002551423.1 47213 D 311402 CDS YP_002551424.1 222109159 7381917 49097..49573 1 NC_011991.1 hypothetical protein 49573 7381917 Avi_9554 Agrobacterium vitis S4 hypothetical protein YP_002551424.1 49097 D 311402 CDS YP_002551425.1 222109160 7381918 49570..50034 1 NC_011991.1 hypothetical protein 50034 7381918 Avi_9555 Agrobacterium vitis S4 hypothetical protein YP_002551425.1 49570 D 311402 CDS YP_002551426.1 222109161 7381919 50031..50450 1 NC_011991.1 hypothetical protein 50450 7381919 Avi_9556 Agrobacterium vitis S4 hypothetical protein YP_002551426.1 50031 D 311402 CDS YP_002551427.1 222109162 7381920 complement(50580..51065) 1 NC_011991.1 hypothetical protein 51065 7381920 Avi_9557 Agrobacterium vitis S4 hypothetical protein YP_002551427.1 50580 R 311402 CDS YP_002551428.1 222109163 7381921 51064..51651 1 NC_011991.1 hypothetical protein 51651 7381921 Avi_9558 Agrobacterium vitis S4 hypothetical protein YP_002551428.1 51064 D 311402 CDS YP_002551429.1 222109164 7381922 51766..52245 1 NC_011991.1 hypothetical protein 52245 7381922 Avi_9559 Agrobacterium vitis S4 hypothetical protein YP_002551429.1 51766 D 311402 CDS YP_002551430.1 222109165 7381924 53364..54290 1 NC_011991.1 antirestriction protein 54290 ardC 7381924 ardC Agrobacterium vitis S4 antirestriction protein YP_002551430.1 53364 D 311402 CDS YP_002551431.1 222109166 7381925 54290..54841 1 NC_011991.1 hypothetical protein 54841 7381925 Avi_9566 Agrobacterium vitis S4 hypothetical protein YP_002551431.1 54290 D 311402 CDS YP_002551432.1 222109167 7381926 54838..55782 1 NC_011991.1 hypothetical protein 55782 7381926 Avi_9567 Agrobacterium vitis S4 hypothetical protein YP_002551432.1 54838 D 311402 CDS YP_002551433.1 222109168 7381927 complement(55940..56224) 1 NC_011991.1 hypothetical protein 56224 7381927 Avi_9569 Agrobacterium vitis S4 hypothetical protein YP_002551433.1 55940 R 311402 CDS YP_002551434.1 222109169 7381928 complement(56381..56896) 1 NC_011991.1 hypothetical protein 56896 7381928 Avi_9570 Agrobacterium vitis S4 hypothetical protein YP_002551434.1 56381 R 311402 CDS YP_002551435.1 222109170 7381929 57378..57695 1 NC_011991.1 hypothetical protein 57695 7381929 Avi_9572 Agrobacterium vitis S4 hypothetical protein YP_002551435.1 57378 D 311402 CDS YP_002551436.1 222109171 7381930 58430..59485 1 NC_011991.1 hypothetical protein 59485 7381930 Avi_9577 Agrobacterium vitis S4 hypothetical protein YP_002551436.1 58430 D 311402 CDS YP_002551437.1 222109172 7381931 59884..60285 1 NC_011991.1 hypothetical protein 60285 7381931 Avi_9580 Agrobacterium vitis S4 hypothetical protein YP_002551437.1 59884 D 311402 CDS YP_002551438.1 222109173 7381932 complement(60465..60785) 1 NC_011991.1 hypothetical protein 60785 7381932 Avi_9583 Agrobacterium vitis S4 hypothetical protein YP_002551438.1 60465 R 311402 CDS YP_002551439.1 222109174 7381933 61091..61414 1 NC_011991.1 hypothetical protein 61414 7381933 Avi_9585 Agrobacterium vitis S4 hypothetical protein YP_002551439.1 61091 D 311402 CDS YP_002551440.1 222109175 7381934 complement(61930..62268) 1 NC_011991.1 hypothetical protein 62268 7381934 Avi_9587 Agrobacterium vitis S4 hypothetical protein YP_002551440.1 61930 R 311402 CDS YP_002551441.1 222109176 7381935 complement(62265..62570) 1 NC_011991.1 hypothetical protein 62570 7381935 Avi_9588 Agrobacterium vitis S4 hypothetical protein YP_002551441.1 62265 R 311402 CDS YP_002551442.1 222109177 7381936 complement(62749..64638) 1 NC_011991.1 VirD4 family; conjugal transfer coupling protein TraG 64638 traG 7381936 traG Agrobacterium vitis S4 conjugal transfer coupling protein TraG YP_002551442.1 62749 R 311402 CDS YP_002551443.1 222109178 7381937 complement(64625..64903) 1 NC_011991.1 conjugal transfer protein Dtr system 64903 traD 7381937 traD Agrobacterium vitis S4 conjugal transfer protein Dtr system YP_002551443.1 64625 R 311402 CDS YP_002551444.1 222109179 7381938 complement(64932..65156) 1 NC_011991.1 conjugal transfer protein Dtr system 65156 traC 7381938 traC Agrobacterium vitis S4 conjugal transfer protein Dtr system YP_002551444.1 64932 R 311402 CDS YP_002551445.1 222109180 7381939 65368..69438 1 NC_011991.1 Ti-type conjugative transfer relaxase TraA 69438 traA 7381939 traA Agrobacterium vitis S4 Ti-type conjugative transfer relaxase TraA YP_002551445.1 65368 D 311402 CDS YP_002551446.1 222109181 7381940 69435..69968 1 NC_011991.1 conjugal transfer pilin processing protease TraF 69968 traF 7381940 traF Agrobacterium vitis S4 conjugal transfer pilin processing protease TraF YP_002551446.1 69435 D 311402 CDS YP_002551447.1 222109182 7381941 69985..71127 1 NC_011991.1 conjugal transfer protein TraB 71127 traB 7381941 traB Agrobacterium vitis S4 conjugal transfer protein TraB YP_002551447.1 69985 D 311402 CDS YP_002551448.1 222109183 7381942 71566..72201 1 NC_011991.1 conjugal transfer protein TraH 72201 traH 7381942 traH Agrobacterium vitis S4 conjugal transfer protein TraH YP_002551448.1 71566 D 311402 CDS YP_002551449.1 222109184 7381943 complement(72574..73140) 1 NC_011991.1 hypothetical protein 73140 7381943 Avi_9601 Agrobacterium vitis S4 hypothetical protein YP_002551449.1 72574 R 311402 CDS YP_002551450.1 222109185 7381944 complement(73516..73695) 1 NC_011991.1 hypothetical protein 73695 7381944 Avi_9603 Agrobacterium vitis S4 hypothetical protein YP_002551450.1 73516 R 311402 CDS YP_002551451.1 222109186 7381945 73734..74039 1 NC_011991.1 hypothetical protein 74039 7381945 Avi_9605 Agrobacterium vitis S4 hypothetical protein YP_002551451.1 73734 D 311402 CDS YP_002551452.1 222109187 7381946 complement(74455..75141) 1 NC_011991.1 hypothetical protein 75141 7381946 Avi_9606 Agrobacterium vitis S4 hypothetical protein YP_002551452.1 74455 R 311402 CDS YP_002551453.1 222109188 7381947 complement(75240..76346) 1 NC_011991.1 histidinol-phosphate aminotransferase 76346 hisC 7381947 hisC Agrobacterium vitis S4 histidinol-phosphate aminotransferase YP_002551453.1 75240 R 311402 CDS YP_002551454.1 222109189 7381948 complement(76409..77671) 1 NC_011991.1 isopropylmalate/homocitrate/citramalate synthase 77671 7381948 Avi_9608 Agrobacterium vitis S4 isopropylmalate/homocitrate/citramalate synthase YP_002551454.1 76409 R 311402 CDS YP_002551455.1 222109190 7381949 complement(77770..78636) 1 NC_011991.1 3-hydroxyisobutyrate dehydrogenase 78636 mmsB 7381949 mmsB Agrobacterium vitis S4 3-hydroxyisobutyrate dehydrogenase YP_002551455.1 77770 R 311402 CDS YP_002551456.1 222109191 7381950 complement(78790..80637) 1 NC_011991.1 ABC transporter ATPase 80637 7381950 Avi_9610 Agrobacterium vitis S4 ABC transporter ATPase YP_002551456.1 78790 R 311402 CDS YP_002551457.1 222109192 7381951 complement(80698..81372) 1 NC_011991.1 hypothetical protein 81372 7381951 Avi_9611 Agrobacterium vitis S4 hypothetical protein YP_002551457.1 80698 R 311402 CDS YP_002551458.1 222109193 7381952 complement(81422..82090) 1 NC_011991.1 transcriptional regulatory protein 82090 7381952 Avi_9612 Agrobacterium vitis S4 transcriptional regulatory protein YP_002551458.1 81422 R 311402 CDS YP_002551459.1 222109194 7381953 82444..82893 1 NC_011991.1 Transposase 82893 7381953 Avi_9615 Agrobacterium vitis S4 Transposase YP_002551459.1 82444 D 311402 CDS YP_002551460.1 222109195 7381954 complement(82904..83491) 1 NC_011991.1 IS21 family transposase 83491 istB 7381954 istB Agrobacterium vitis S4 IS21 family transposase YP_002551460.1 82904 R 311402 CDS YP_002551461.1 222109196 7381955 complement(83757..84449) 1 NC_011991.1 transposase 84449 7381955 Avi_9617 Agrobacterium vitis S4 transposase YP_002551461.1 83757 R 311402 CDS YP_002551462.1 222109197 7381956 84516..84752 1 NC_011991.1 Transposase 84752 7381956 Avi_9618 Agrobacterium vitis S4 Transposase YP_002551462.1 84516 D 311402 CDS YP_002551463.1 222109198 7381957 84801..85253 1 NC_011991.1 hypothetical protein 85253 7381957 Avi_9620 Agrobacterium vitis S4 hypothetical protein YP_002551463.1 84801 D 311402 CDS YP_002551464.1 222109199 7381958 85269..85622 1 NC_011991.1 transposase 85622 7381958 Avi_9622 Agrobacterium vitis S4 transposase YP_002551464.1 85269 D 311402 CDS YP_002551465.1 222109200 7381850 85686..87305 1 NC_011991.1 transposase 87305 7381850 Avi_9623 Agrobacterium vitis S4 transposase YP_002551465.1 85686 D 311402 CDS YP_002551466.1 222109201 7381852 complement(87689..89086) 1 NC_011991.1 glycosyltransferase 89086 7381852 Avi_9626 Agrobacterium vitis S4 glycosyltransferase YP_002551466.1 87689 R 311402 CDS YP_002551467.1 222109202 7381853 complement(89159..91069) 1 NC_011991.1 sulfate adenylate transferase subunit 1 91069 cysN 7381853 cysN Agrobacterium vitis S4 sulfate adenylate transferase subunit 1 YP_002551467.1 89159 R 311402 CDS YP_002551468.1 222109203 7381854 complement(91069..91971) 1 NC_011991.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 91971 7381854 Avi_9630 Agrobacterium vitis S4 sulfate adenylyltransferase subunit 2 YP_002551468.1 91069 R 311402 CDS YP_002551469.1 222109204 7381855 complement(92048..92989) 1 NC_011991.1 hypothetical protein 92989 7381855 Avi_9632 Agrobacterium vitis S4 hypothetical protein YP_002551469.1 92048 R 311402 CDS YP_002551470.1 222109205 7381856 complement(93081..93779) 1 NC_011991.1 3-isopropylmalate dehydratase small subunit 93779 leuD 7381856 leuD Agrobacterium vitis S4 3-isopropylmalate dehydratase small subunit YP_002551470.1 93081 R 311402 CDS YP_002551471.1 222109206 7381857 complement(93776..95125) 1 NC_011991.1 3-isopropylmalate dehydratase large subunit 95125 leuC 7381857 leuC Agrobacterium vitis S4 3-isopropylmalate dehydratase large subunit YP_002551471.1 93776 R 311402 CDS YP_002551472.1 222109207 7381858 95783..96763 1 NC_011991.1 SyrP-like protein 96763 7381858 Avi_9638 Agrobacterium vitis S4 SyrP-like protein YP_002551472.1 95783 D 311402 CDS YP_002551473.1 222109208 7381859 96775..108060 1 NC_011991.1 peptide synthetase 108060 7381859 Avi_9641 Agrobacterium vitis S4 peptide synthetase YP_002551473.1 96775 D 311402 CDS YP_002551474.1 222109209 7381860 108053..115738 1 NC_011991.1 peptide synthetase 115738 7381860 Avi_9643 Agrobacterium vitis S4 peptide synthetase YP_002551474.1 108053 D 311402 CDS YP_002551475.1 222109210 7381861 115923..116480 1 NC_011991.1 Phosphopantetheinyl transferase 116480 7381861 Avi_9644 Agrobacterium vitis S4 Phosphopantetheinyl transferase YP_002551475.1 115923 D 311402 CDS YP_002551476.1 222109211 7381862 116565..117056 1 NC_011991.1 hypothetical protein 117056 7381862 Avi_9645 Agrobacterium vitis S4 hypothetical protein YP_002551476.1 116565 D 311402 CDS YP_002551477.1 222109212 7381863 complement(117454..118068) 1 NC_011991.1 hypothetical protein 118068 7381863 Avi_9646 Agrobacterium vitis S4 hypothetical protein YP_002551477.1 117454 R 311402 CDS YP_002551478.1 222109213 7381864 complement(118069..119406) 1 NC_011991.1 conjugal transfer protein TrbI 119406 trbI 7381864 trbI Agrobacterium vitis S4 conjugal transfer protein TrbI YP_002551478.1 118069 R 311402 CDS YP_002551479.1 222109214 7381865 complement(119420..119875) 1 NC_011991.1 conjugal transfer protein TrbH 119875 trbH 7381865 trbH Agrobacterium vitis S4 conjugal transfer protein TrbH YP_002551479.1 119420 R 311402 CDS YP_002551480.1 222109215 7381866 complement(119879..120700) 1 NC_011991.1 conjugal transfer protein TrbG 120700 trbG 7381866 trbG Agrobacterium vitis S4 conjugal transfer protein TrbG YP_002551480.1 119879 R 311402 CDS YP_002551481.1 222109216 7381867 complement(120719..121384) 1 NC_011991.1 conjugal transfer protein TrbF 121384 trbF 7381867 trbF Agrobacterium vitis S4 conjugal transfer protein TrbF YP_002551481.1 120719 R 311402 CDS YP_002551482.1 222109217 7381868 complement(121425..122531) 1 NC_011991.1 conjugal transfer protein TrbL 122531 trbL 7381868 trbL Agrobacterium vitis S4 conjugal transfer protein TrbL YP_002551482.1 121425 R 311402 CDS YP_002551483.1 222109218 7381869 complement(122804..123592) 1 NC_011991.1 conjugal transfer protein TrbJ 123592 trbJ 7381869 trbJ Agrobacterium vitis S4 conjugal transfer protein TrbJ YP_002551483.1 122804 R 311402 CDS YP_002551484.1 222109219 7381870 complement(123567..125630) 1 NC_011991.1 type IV secretion system ATPase; VirB4 family; conjugal transfer protein TrbE 125630 trbE 7381870 trbE Agrobacterium vitis S4 conjugal transfer protein TrbE YP_002551484.1 123567 R 311402 CDS YP_002551485.1 222109220 7381871 complement(126009..126308) 1 NC_011991.1 conjugal transfer protein TrbD 126308 trbD 7381871 trbD Agrobacterium vitis S4 conjugal transfer protein TrbD YP_002551485.1 126009 R 311402 CDS YP_002551486.1 222109221 7381872 complement(126301..126666) 1 NC_011991.1 conjugal transfer protein 126666 trbC 7381872 trbC Agrobacterium vitis S4 conjugal transfer protein YP_002551486.1 126301 R 311402 CDS YP_002551487.1 222109222 7381873 complement(126684..127646) 1 NC_011991.1 VirB11 family protein; ATPase; conjugal transfer protein TrbB 127646 trbB 7381873 trbB Agrobacterium vitis S4 conjugal transfer protein TrbB YP_002551487.1 126684 R 311402 CDS YP_002551488.1 222109223 7381874 128401..129123 1 NC_011991.1 two-component transcriptional regulator LuxR family 129123 7381874 Avi_9665 Agrobacterium vitis S4 two-component transcriptional regulator LuxR family YP_002551488.1 128401 D 311402 CDS YP_002551489.1 222109224 7381875 129203..129871 1 NC_011991.1 autoinducer (acylhomoserine lactone) synthase 129871 7381875 Avi_9666 Agrobacterium vitis S4 autoinducer (acylhomoserine lactone) synthase YP_002551489.1 129203 D 311402 CDS